Thiol:disulfide interchange protein DsbA
Flagellar hook-length control protein-like C-terminal
Aldehyde oxidase/xanthine dehydrogenase a/b hammerhead
Major facilitator superfamily (MFS) profile
ABC-type transport auxiliary lipoprotein component
Participates in the substrate recognition with KAPA and in a stacking interaction with the adenine ring of SAM
Large ribosomal subunit protein bL12 C-terminal
Large ribosomal subunit protein bL12 oligomerization
Penicillin-binding protein transpeptidase
Extradiol ring-cleavage dioxygenase LigAB LigA subunit
Pyridoxamine kinase/Phosphomethylpyrimidine kinase
Type III secretion system flagellar brake protein YcgR PilZN
Prokaryotic-type class I peptide chain release factors
3-hydroxyisobutyrate dehydrogenase-like NAD-binding
6-phosphogluconate dehydrogenase NADP-binding
Type II secretion system protein GspI C-terminal
Quinohemoprotein amine dehydrogenase gamma subunit structural
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
D-isomer specific 2-hydroxyacid dehydrogenase catalytic
FAD-dependent oxidoreductase 2 FAD binding
Periplasmic nitrate reductase, electron transfer subunit
DnaJ homologue subfamily C member 28 conserved
Flagellar basal body rod protein N-terminal
Flagellar basal-body/hook protein C-terminal
Heme-copper oxidase subunit III family profile
Cation-transporting P-type ATPase N-terminal
RND efflux pump membrane fusion protein barrel-sandwich
TRAP C4-dicarboxylate transport system permease DctM subunit
Beta-ketoacyl-[acyl-carrier-protein] synthase III C-terminal
Beta-ketoacyl-[acyl-carrier-protein] synthase III N-terminal
Bacterial type II secretion system protein E
Acyl-CoA dehydrogenase/oxidase C-terminal
Acyl-CoA dehydrogenase/oxidase N-terminal
Fumarate reductase/succinate dehydrogenase flavoprotein-like C-terminal
NADH:quinone oxidoreductase/Mrp antiporter membrane subunit
Aconitase/3-isopropylmalate dehydratase large subunit alpha/beta/alpha
Quinolinate phosphoribosyl transferase C-terminal
Quinolinate phosphoribosyl transferase N-terminal
Antitoxin Xre/MbcA/ParS-like toxin-binding
Transposase IS204/IS1001/IS1096/IS1165 helix-turn-helix
Glycosyltransferase subfamily 4-like N-terminal
Electron transfer flavoprotein alpha/beta-subunit N-terminal
NADH:ubiquinone oxidoreductase 30kDa subunit
3-hydroxyacyl-CoA dehydrogenase C-terminal
3-hydroxyacyl-CoA dehydrogenase NAD binding
Flagellar motor switch protein FliG C-terminal
Flagellar motor switch protein FliG N-terminal
Flagellar motor switch protein FliG middle
Extradiol ring-cleavage dioxygenase class III enzyme subunit B
Polysaccharide biosynthesis protein CapD-like
UDP-glucose/GDP-mannose dehydrogenase C-terminal
Aconitase A/isopropylmalate dehydratase small subunit swivel
Ribonucleotide reductase large subunit C-terminal
RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein
Large ribosomal subunit protein uL15/eL18
Metallo-beta-lactamase domain-containing protein
Gp5/Type VI secretion system Vgr protein OB-fold
Small ribosomal subunit protein uS4 N-terminal
Aminoacyl-transfer RNA synthetases class-II family profile
Manganese/iron superoxide dismutase C-terminal
Manganese/iron superoxide dismutase N-terminal
Release factor glutamine methyltransferase N-terminal
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like
Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr C-terminal
Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr N-terminal
Glucose-methanol-choline oxidoreductase N-terminal
Gfo/Idh/MocA-like oxidoreductase C-terminal
Gfo/Idh/MocA-like oxidoreductase N-terminal
DNA-3-methyladenine glycosylase AlkA N-terminal
YbaK/aminoacyl-tRNA synthetase-associated
Urease accessory protein UreH-like transmembrane
Cysteine sulfenic acid (-SOH) intermediate; for peroxidase activity
Large ribosomal subunit protein uL6 alpha-beta
Flagellar hook-associated protein 2 C-terminal
Flagellar hook-associated protein 2 N-terminal
Carboxypeptidase regulatory-like domain-containing protein
5-glutamyl coenzyme A thioester intermediate
Acetyl-CoA hydrolase/transferase C-terminal
Acetyl-CoA hydrolase/transferase N-terminal
Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding
tRNA pseudouridine synthase II TruB subfamily 1 C-terminal
tRNA pseudouridylate synthase B C-terminal
Cob(I)alamin adenosyltransferase N-terminal
Leucine-binding protein domain-containing protein
Tetrahydrodipicolinate-N-succinyltransferase chain A
Saccharopine dehydrogenase-like C-terminal
Cytochrome b561 bacterial/Ni-hydrogenase
Ionotropic glutamate receptor C-terminal
Solute-binding protein family 3/N-terminal
Tryptophan synthase beta chain-like PALP
Siroheme decarboxylase AsnC-like ligand binding
RNA 2-O ribose methyltransferase substrate binding
Tryptophyl-tyrosyl-methioninium (Tyr-Met) (with Trp-98)
Formamidopyrimidine-DNA glycosylase catalytic
Proton donor; for beta-elimination activity
Proton donor; for delta-elimination activity
Anthranilate synthase component I N-terminal
Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase C-terminal
Phage terminase large subunit N-terminal
TonB-dependent receptor-like beta-barrel
Flavocytochrome c sulphide dehydrogenase flavin-binding
Thiamine pyrophosphate enzyme N-terminal TPP-binding
Thiamine pyrophosphate enzyme TPP-binding
Flagellar assembly protein FliH/Type III secretion system HrpE
Involved in Mg(2+) ion dislocation from EF-Tu
Translation elongation factor EFTs/EF1B dimerisation
Transposase IS204/IS1001/IS1096/IS1165 DDE
NADPH-dependent 7-cyano-7-deazaguanine reductase N-terminal
Pyrimidine nucleoside phosphorylase C-terminal
Nitrite/Sulfite reductase ferredoxin-like
DNA polymerase III subunit delta C-terminal
Cytochrome oxidase subunit II copper A binding
Cytochrome oxidase subunit II transmembrane region profile
Phosphatidic acid phosphatase type 2/haloperoxidase
NIF system FeS cluster assembly NifU N-terminal
Helix-hairpin-helix DNA-binding motif class 1
Na(+)-translocating NADH-quinone reductase subunit A C-terminal
Membrane fusion protein biotin-lipoyl like
Fe/B12 periplasmic-binding domain-containing protein
Alanyl-transfer RNA synthetases family profile
Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose
Thymidylate synthase/dCMP hydroxymethylase
Alpha-D-phosphohexomutase alpha/beta/alpha
ATPase F1/V1/A1 complex alpha/beta subunit N-terminal
ATPase F1/V1/A1 complex alpha/beta subunit nucleotide-binding
Heat-inducible transcription repressor HrcA C-terminal
Winged helix-turn-helix transcription repressor HrcA DNA-binding
Prepilin type IV endopeptidase peptidase
DNA/pantothenate metabolism flavoprotein C-terminal
Phosphopantothenoylcysteine decarboxylase
NADH-Ubiquinone oxidoreductase (complex I) chain 5 N-terminal
Outer membrane protein assembly factor BamB
Methylene-tetrahydromethanopterin dehydrogenase N-terminal
N-end rule aminoacyl transferase C-terminal
Translation elongation factor P/YeiP central
RNA polymerase sigma factor 54 DNA-binding
RNA polymerase sigma factor 54 core-binding
Alginate export domain-containing protein
Na+/H+ antiporter MnhB subunit-related protein
Reversibly protonated during proton transport
Sodium/calcium exchanger membrane region
Aromatic amino acid beta-eliminating lyase/threonine aldolase
DNA mismatch repair proteins mutS family
Pyrroline-5-carboxylate reductase catalytic N-terminal
Glycerol-3-phosphate dehydrogenase NAD-dependent C-terminal
Glycerol-3-phosphate dehydrogenase NAD-dependent N-terminal
Ribose-phosphate pyrophosphokinase N-terminal
Ribosomal RNA small subunit methyltransferase E PUA-like
Ribosomal RNA small subunit methyltransferase E methyltransferase
Secreted protein containing HslJ-like protein
Sodium symporter small subunit predicted
Transcription elongation factor GreA/GreB C-terminal
Transcription elongation factor GreA/GreB N-terminal
Aminoacyl-tRNA synthetase class I anticodon-binding
Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic
Ribulose bisphosphate carboxylase small subunit
Fructose-1-6-bisphosphatase class 1 C-terminal
Fructose-1-6-bisphosphatase class I N-terminal
SUF system FeS cluster assembly SufBD N-terminal
3-deoxy-D-manno-octulosonic-acid transferase N-terminal
RNA binding; important for wobble base 34 recognition
Nucleophile; cysteine thiosulfonate intermediate
Phosphoadenosine phosphosulphate reductase
Large ribosomal subunit protein uL5 C-terminal
Large ribosomal subunit protein uL5 N-terminal
Poly-beta-hydroxybutyrate polymerase N-terminal
DNA polymerase III beta sliding clamp C-terminal
DNA polymerase III beta sliding clamp N-terminal
DNA polymerase III beta sliding clamp central
Glycine cleavage T-protein C-terminal barrel
tRNA nucleotidyltransferase/poly(A) polymerase RNA and SrmB- binding
Glycosyl transferase family 3 N-terminal
Signal transduction histidine kinase internal region
FAD-dependent cmnm(5)s(2)U34 oxidoreductase
Peptidase S11 D-alanyl-D-alanine carboxypeptidase A N-terminal
Methylamine/Aralkylamine dehydrogenase light chain C-terminal
Tryptophylquinone 6'-substrate hemiaminal intermediate
ABC transporter substrate-binding protein PnrA-like
Important for beta-aspartyl-AMP intermediate formation
NADH:flavin oxidoreductase/NADH oxidase N-terminal
Could play a key role in the communication between the regulatory and the substrate sites
O-(5'-phospho-DNA)-tyrosine intermediate
Pyrroline-5-carboxylate reductase dimerisation
2-(S-cysteinyl)pyruvic acid O-phosphothioketal
Resolvase/invertase-type recombinase catalytic
Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB)
NADH-ubiquinone oxidoreductase 51kDa subunit iron-sulphur binding
Charge relay system; for autoendoproteolytic cleavage activity
Cleavage (non-hydrolytic); by autocatalysis
Phosphatidylserine decarboxylase alpha chain
Phosphatidylserine decarboxylase beta chain
Schiff-base intermediate with substrate; via pyruvic acid; for decarboxylase activity
Alanine dehydrogenase/pyridine nucleotide transhydrogenase N-terminal
Alanine dehydrogenase/pyridine nucleotide transhydrogenase NAD(H)-binding
Required for zinc-mediated homotetramerization and catalytic activity
Electron transfer via tryptophanyl radical
TIGR03016 family PEP-CTERM system-associated outer membrane protein
Photosynthesis system II assembly factor Ycf48/Hcf136-like
Cytochrome c-type biogenesis protein CcmF C-terminal
Fe-S hydro-lyase tartrate dehydratase alpha-type catalytic
Fe-S hydro-lyase tartrate dehydratase beta-type catalytic
RNA polymerase sigma factor 70 region 4 type 2
Glutamate-ammonia ligase adenylyltransferase repeated
PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
Peptidase M1 alanyl aminopeptidase C-terminal
Peptidase M1 alanyl aminopeptidase Ig-like fold
Peptidase M1 membrane alanine aminopeptidase
Chromosomal replication initiator DnaA C-terminal
FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding
Lysidine-tRNA(Ile) synthetase C-terminal
DNA-directed RNA polymerase beta subunit external 1
DNA-directed RNA polymerase subunit 2 hybrid-binding
Proton acceptor; for glutaminase activity
Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding
Outer membrane protein assembly factor BamA
PHA accumulation regulator DNA-binding N-terminal
Type I restriction modification DNA specificity
Pyridine nucleotide-disulphide oxidoreductase dimerisation
Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC
Alcohol dehydrogenase iron-type/glycerol dehydrogenase GldA
Quinohemoprotein amine dehydrogenase alpha subunit
Quinohemoprotein amine dehydrogenase alpha subunit haem binding
S-adenosylmethionine synthetase C-terminal
S-adenosylmethionine synthetase N-terminal
L-cysteine S-thiosulfotransferase subunit SoxA
Carbamoyl-phosphate synthase small subunit N-terminal
Survival protein SurE-like phosphatase/nucleotidase
tRNA(Ile)-lysidine/2-thiocytidine synthase N-terminal
Cysteine sulfenic acid (-SOH) intermediate
NAD(P) transhydrogenase alpha subunit C-terminal
Proline utilization A proline dehydrogenase N-terminal
Flagellar motor switch protein FliN-like C-terminal
O-(3'-phospho-DNA)-tyrosine intermediate
Pyruvate phosphate dikinase AMP/ATP-binding
Phenol hydroxylase C-terminal dimerisation
Interaction with polymerase core subunit RpoC
High-affinity branched-chain amino acid transport system permease LivHM N-terminal
UDP N-acetylglucosamine O-acyltransferase C-terminal
Superoxide dismutase copper/zinc binding
Acyl-CoA dehydrogenase C-terminal bacterial-type
Arginine biosynthesis bifunctional protein ArgJ alpha chain
Arginine biosynthesis bifunctional protein ArgJ beta chain
Involved in the stabilization of negative charge on the oxyanion by the formation of the oxyanion hole
NADH:ubiquinone oxidoreductase-like 20kDa subunit
Membrane insertase YidC/Oxa/ALB C-terminal
HPr(Ser) kinase/phosphorylase N-terminal
Important for the catalytic mechanism of both phosphorylation and dephosphorylation
Important for the catalytic mechanism of dephosphorylation
Proton acceptor; for phosphorylation activity. Proton donor; for dephosphorylation activity
Dihydrodipicolinate reductase C-terminal
Dihydrodipicolinate reductase N-terminal
Gamma-butyrobetaine hydroxylase-like N-terminal
Polymerase/histidinol phosphatase N-terminal
DNA replication/recombination mediator RecO N-terminal
tRNA-specific 2-thiouridylase MnmA-like C-terminal
tRNA-specific 2-thiouridylase MnmA-like central
Organic solvent tolerance-like N-terminal
Plays an important role in substrate specificity
Mechanosensitive ion channel inner membrane
Ribosome maturation factor RimP C-terminal
Ribosome maturation factor RimP N-terminal
Outer membrane protein assembly factor BamE
Shikimate dehydrogenase substrate binding N-terminal
Ribulose bisphosphate carboxylase large subunit C-terminal
Ribulose bisphosphate carboxylase large subunit ferrodoxin-like N-terminal
Type II secretion system protein GspG C-terminal
Important for interaction with partner proteins
Lipid/polyisoprenoid-binding YceI-like domain-containing protein
Important for catalytic activity; stabilizes the transition state when the phosphoryl donor is PPi
Pseudouridine synthase I TruA alpha/beta
Regulator of nucleoside diphosphate kinase N-terminal
Disulphide bond isomerase DsbC/G N-terminal
Glutamyl/glutaminyl-tRNA synthetase class Ib anti-codon binding
Glycosyl transferase family 28 C-terminal
Glycosyltransferase family 28 N-terminal
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Large ribosomal subunit protein uL2 C-terminal
Phosphotransferase system enzyme I N-terminal
Ribosomal RNA adenine methylase transferase N-terminal
Thiol:disulfide interchange protein DsbD
CobB/CobQ-like glutamine amidotransferase
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase non-repeat region
Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core
Molybdopterin cofactor biosynthesis C (MoaC)
Peptidase S11 D-Ala-D-Ala carboxypeptidase A C-terminal
serine-type D-Ala-D-Ala carboxypeptidase
Polysaccharide chain length determinant N-terminal
Septum formation inhibitor MinC C-terminal
Septum formation inhibitor MinC N-terminal
Cytochrome b/b6 C-terminal region profile
Cytochrome b/b6 N-terminal region profile
Large ribosomal subunit protein uL30-like ferredoxin-like fold
Outer membrane lipoprotein-sorting protein
Large ribosomal subunit protein uL11 C-terminal
Large ribosomal subunit protein uL11 N-terminal
Type I restriction enzyme R protein N-terminal
Flagellar Assembly Protein A N-terminal region
Aspartate/ornithine carbamoyltransferase Asp/Orn-binding
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding
S-adenosyl-L-homocysteine hydrolase NAD binding
ABC transporter substrate-binding protein
Acetyl-CoA dehydrogenase-like C-terminal
Acyl-CoA dehydrogenase N-terminal bacteria
Inner membrane protein YgaP-like transmembrane
Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Tetrapyrrole biosynthesis glutamyl-tRNA reductase dimerisation
Bacteriophage tail tape measure C-terminal
NADH:ubiquinone oxidoreductase intermediate-associated protein 30
CNP1-like uncharacterized domain-containing protein
Lipopolysaccharide export system protein LptA
Terminase large subunit-like endonuclease
tRNA uridine 5-carboxymethylaminomethyl modification enzyme C-terminal subdomain
Aldehyde ferredoxin oxidoreductase N-terminal
Bacterial bifunctional deaminase-reductase C-terminal
Water stress and hypersensitive response
N6 adenine-specific DNA methyltransferase N-terminal
Peptide methionine sulphoxide reductase MsrA
Putative regulatory protein FmdB Zinc ribbon
Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
Pyruvate/ketoisovalerate oxidoreductase catalytic
Glycine zipper domain-containing protein
Cytochrome c-552/DMSO reductase-like haem-binding
Cytochrome c-552/DMSO reductase-like haem-binding domain-containing protein
PilC beta-propeller domain-containing protein
Conserved hypothetical protein CHP02679 N terminus
Chromosomal replication initiator protein DnaA
Moybdenum cofactor oxidoreductase dimerisation
Meso-diaminopimelate D-dehydrogenase C-terminal
Lipoprotein SmpA/OmlA domain-containing protein
Mandelate racemase/muconate lactonizing enzyme C-terminal
N-(5'phosphoribosyl) anthranilate isomerase (PRAI)
ATP synthase F1 complex delta/epsilon subunit N-terminal
Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site
Tetrahydrofolate dehydrogenase/cyclohydrolase NAD(P)-binding
Tetrahydrofolate dehydrogenase/cyclohydrolase catalytic
Phosphoenolpyruvate carboxykinase C-terminal P-loop
Phosphoenolpyruvate carboxykinase GTP-utilising N-terminal
Glutamate synthase alpha subunit C-terminal
Phosphoribosylformylglycinamidine synthase N-terminal
Phosphoribosylformylglycinamidine synthase linker
Lytic transglycosylase superhelical linker
Mannose-6-phosphate isomerase type II C-terminal
Large ribosomal subunit protein bL25 L25
Large ribosomal subunit protein bL25 beta
DNA-directed DNA polymerase family A palm
1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
1-deoxy-D-xylulose 5-phosphate reductoisomerase N-terminal
Gly-cisPro motif, important for rejection of L-amino acids
Essential for prephenate dehydratase activity
DNA-binding and helicase activity, interacts with RecC
Nuclease activity, interacts with RecD and RecA
Could be important to modulate the pK values of the two catalytic cysteine residues
Restriction system protein Mrr-like N-terminal