55577:GN03 p040
gene id: 55577:GN03_p040
uniprot id: A0A024BK29
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Component of the chloroplastic Clp protease core complex.
messages: Cytoplasm

55577:GN03 p025
gene id: 55577:GN03_p025
uniprot id: A0A024BK43
names: Similarity
messages: Belongs to the universal ribosomal protein uL22 family.

55577:GN03 p039
gene id: 55577:GN03_p039
uniprot id: A0A024BKB8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbB/PsbC family. PsbB subfamily.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

55577:GN03 p066
gene id: 55577:GN03_p066
uniprot id: A0A024BK94
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsaA/PsaB family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.
messages: The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits.

55577:GN03 p061
gene id: 55577:GN03_p061
uniprot id: A0A024BK99
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Mitochondrion membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p052
gene id: 55577:GN03_p052
uniprot id: A0A024BK22
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbJ family.
messages: Cellular thylakoid membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

55577:GN03 p036
gene id: 55577:GN03_p036
uniprot id: A0A024BL89
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbH family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, numerous small proteins, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

55577:GN03 p006
gene id: 55577:GN03_p006
uniprot id: A0A024BLB9
names: Similarity
messages: Belongs to the universal ribosomal protein uS7 family.

55577:GN03 p045
gene id: 55577:GN03_p045
uniprot id: A0A024BL52
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

55577:GN03 p005
gene id: 55577:GN03_p005
uniprot id: A0A024BK47
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p063
gene id: 55577:GN03_p063
uniprot id: A0A024BL67
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 30 kDa subunit family.
messages: Cell membrane
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p080
gene id: 55577:GN03_p080
uniprot id: A0A024BL22
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase B chain family.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Membrane

55577:GN03 p051
gene id: 55577:GN03_p051
uniprot id: A0A024BKB0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbL family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

55577:GN03 p044
gene id: 55577:GN03_p044
uniprot id: A0A024BKN8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS18 family.

55577:GN03 p003
gene id: 55577:GN03_p003
uniprot id: A0A024BL90
names: Similarity
messages: Belongs to the universal ribosomal protein uL23 family.

55577:GN03 p084
gene id: 55577:GN03_p084
uniprot id: A0A024BKK5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the intron maturase 2 family. MatK subfamily.
messages: Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.
messages: chloroplast

55577:GN03 p077
gene id: 55577:GN03_p077
uniprot id: A0A024BJZ9
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

55577:GN03 p008
gene id: 55577:GN03_p008
uniprot id: A0A024BL85
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bL32 family.
messages: chloroplast

55577:GN03 p028
gene id: 55577:GN03_p028
uniprot id: A0A024BL65
names: Similarity
messages: Belongs to the universal ribosomal protein uL14 family.

55577:GN03 p016
gene id: 55577:GN03_p016
uniprot id: A0A024BLB0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p054
gene id: 55577:GN03_p054
uniprot id: A0A024BKM9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cema family.
messages: Membrane

55577:GN03 p024
gene id: 55577:GN03_p024
uniprot id: A0A024BKD3
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.

55577:GN03 p043
gene id: 55577:GN03_p043
uniprot id: A0A024BL84
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

55577:GN03 p067
gene id: 55577:GN03_p067
uniprot id: A0A024BK08
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsaA/PsaB family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.
messages: The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits.

55577:GN03 p038
gene id: 55577:GN03_p038
uniprot id: A0A024BL56
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbT family.
messages: Cellular thylakoid membrane
messages: Seems to play a role in the dimerization of PSII.
messages: chloroplast thylakoid membrane

55577:GN03 p030
gene id: 55577:GN03_p030
uniprot id: A0A024BK37
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

55577:GN03 p001
gene id: 55577:GN03_p001
uniprot id: A0A024BL16
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: C-terminally processed by CtpA; processing is essential to allow assembly of the oxygen-evolving complex and thus photosynthetic growth.
messages: Cellular thylakoid membrane
messages: Herbicides such as atrazine, BNT, diuron or ioxynil bind in the Q(B) binding site and block subsequent electron transfer.
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
messages: Tyr-161 forms a radical intermediate that is referred to as redox-active TyrZ, YZ or Y-Z.

55577:GN03 p068
gene id: 55577:GN03_p068
uniprot id: A0A024BL62
names: Similarity
messages: Belongs to the universal ribosomal protein uS14 family.

55577:GN03 p065
gene id: 55577:GN03_p065
uniprot id: A0A024BL35
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf3 family.
messages: Cellular thylakoid membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Seems to be required for the assembly of the photosystem I complex.

55577:GN03 p081
gene id: 55577:GN03_p081
uniprot id: A0A024BK81
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

55577:GN03 p055
gene id: 55577:GN03_p055
uniprot id: A0A024BL43
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf4 family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: Seems to be required for the assembly of the photosystem I complex.

55577:GN03 p064
gene id: 55577:GN03_p064
uniprot id: A0A024BKM2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

55577:GN03 p042
gene id: 55577:GN03_p042
uniprot id: A0A024BLC5
names: Similarity
messages: Belongs to the universal ribosomal protein uS12 family.

55577:GN03 p041
gene id: 55577:GN03_p041
uniprot id: A0A024BLC5
names: Similarity
messages: Belongs to the universal ribosomal protein uS12 family.

55577:GN03 p012
gene id: 55577:GN03_p012
uniprot id: A0A024BKS0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p015
gene id: 55577:GN03_p015
uniprot id: A0A024BK52
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

55577:GN03 p009
gene id: 55577:GN03_p009
uniprot id: A0A024BKE9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
messages: Cellular thylakoid membrane
messages: May interact with Ccs1.
messages: Membrane
messages: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.

55577:GN03 p069
gene id: 55577:GN03_p069
uniprot id: A0A024BKL7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbZ family.
messages: Cellular thylakoid membrane
messages: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.

55577:GN03 p026
gene id: 55577:GN03_p026
uniprot id: A0A024BL99
names: Similarity
messages: Belongs to the universal ribosomal protein uS3 family.

55577:GN03 p032
gene id: 55577:GN03_p032
uniprot id: A0A024BKP8
names: Similarity
messages: Belongs to the universal ribosomal protein uS11 family.

55577:GN03 p058
gene id: 55577:GN03_p058
uniprot id: A0A024BL70
names: Cofactor
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuBisCO large chain family. Type I subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterohexadecamer of 8 large chains and 8 small chains; disulfide-linked. The disulfide link is formed within the large subunit homodimers.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: The disulfide bond which can form in the large chain dimeric partners within the hexadecamer appears to be associated with oxidative stress and protein turnover.
messages: chloroplast

55577:GN03 p017
gene id: 55577:GN03_p017
uniprot id: A0A024BKR3
names: Similarity
messages: Belongs to the universal ribosomal protein uS15 family.

55577:GN03 p035
gene id: 55577:GN03_p035
uniprot id: A0A024BK33
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family. PetB subfamily.
messages: Binds 2 heme b groups non-covalently with two histidine residues as axial ligands.
messages: Binds one heme group covalently by a single cysteine link with no axial amino acid ligand. This heme was named heme ci.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Heme 1 (or BH or b566) is high-potential and absorbs at about 566 nm, and heme 2 (or BL or b562) is low-potential and absorbs at about 562 nm.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

55577:GN03 p031
gene id: 55577:GN03_p031
uniprot id: A0A024BL93
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

55577:GN03 p029
gene id: 55577:GN03_p029
uniprot id: A0A024BKC8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit.

55577:GN03 p020
gene id: 55577:GN03_p020
uniprot id: A0A024BK47
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p071
gene id: 55577:GN03_p071
uniprot id: A0A024BK92
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.

55577:GN03 p004
gene id: 55577:GN03_p004
uniprot id: A0A024BLA4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf2 family.
messages: Probable ATPase of unknown function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.
messages: chloroplast stroma

55577:GN03 p049
gene id: 55577:GN03_p049
uniprot id: A0A024BKN4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbE/PsbF family.
messages: Cellular thylakoid membrane
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Membrane
messages: This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: With its partner (PsbF) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: chloroplast thylakoid membrane

55577:GN03 p062
gene id: 55577:GN03_p062
uniprot id: A0A024BK13
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p021
gene id: 55577:GN03_p021
uniprot id: A0A024BLA4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf2 family.
messages: Probable ATPase of unknown function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.
messages: chloroplast stroma

55577:GN03 p056
gene id: 55577:GN03_p056
uniprot id: A0A024BKA5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaI family.
messages: Cellular thylakoid membrane
messages: May help in the organization of the PsaL subunit.
messages: Membrane
messages: chloroplast thylakoid membrane

55577:GN03 p057
gene id: 55577:GN03_p057
uniprot id: A0A024BK17
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and 2 subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD).
messages: Belongs to the AccD/PCCB family.
messages: Binds 1 zinc ion per subunit.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.

55577:GN03 p083
gene id: 55577:GN03_p083
uniprot id: A0A024BL51
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbK family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

55577:GN03 p072
gene id: 55577:GN03_p072
uniprot id: A0A024BK04
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbM family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

55577:GN03 p053
gene id: 55577:GN03_p053
uniprot id: A0A024BL75
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome f family.
messages: Binds 1 heme group covalently.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

55577:GN03 p046
gene id: 55577:GN03_p046
uniprot id: A0A024BKB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaJ family.
messages: Cellular thylakoid membrane
messages: May help in the organization of the PsaE and PsaF subunits.
messages: Membrane

55577:GN03 p079
gene id: 55577:GN03_p079
uniprot id: A0A024BKL0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

55577:GN03 p014
gene id: 55577:GN03_p014
uniprot id: A0A024BKE3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p002
gene id: 55577:GN03_p002
uniprot id: A0A024BKS8
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

55577:GN03 p073
gene id: 55577:GN03_p073
uniprot id: A0A024BL58
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetN family.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

55577:GN03 p007
gene id: 55577:GN03_p007
uniprot id: A0A024BKS3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 5 family.
messages: Membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

55577:GN03 p048
gene id: 55577:GN03_p048
uniprot id: A0A024BL79
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetL family.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

55577:GN03 p074
gene id: 55577:GN03_p074
uniprot id: A0A024BKL3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

55577:GN03 p022
gene id: 55577:GN03_p022
uniprot id: A0A024BL90
names: Similarity
messages: Belongs to the universal ribosomal protein uL23 family.

55577:GN03 p034
gene id: 55577:GN03_p034
uniprot id: A0A024BKC3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family. PetD subfamily.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

55577:GN03 p027
gene id: 55577:GN03_p027
uniprot id: A0A024BKQ2
names: Similarity
messages: Belongs to the universal ribosomal protein uL16 family.

55577:GN03 p060
gene id: 55577:GN03_p060
uniprot id: A0A024BL40
names: Similarity
messages: Belongs to the ATPase epsilon chain family.

55577:GN03 p037
gene id: 55577:GN03_p037
uniprot id: A0A024BKP3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbN family.
messages: Cellular thylakoid membrane
messages: May play a role in photosystem I and II biogenesis.
messages: Membrane
messages: Originally thought to be a component of PSII; based on experiments in Synechocystis, N.tabacum and barley, and its absence from PSII in T.elongatus and T.vulcanus, this is probably not true.

55577:GN03 p050
gene id: 55577:GN03_p050
uniprot id: A0A024BL48
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbE/PsbF family.
messages: Cellular thylakoid membrane
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Membrane
messages: This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: With its partner (PsbE) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: chloroplast thylakoid membrane

55577:GN03 p070
gene id: 55577:GN03_p070
uniprot id: A0A024BL31
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbB/PsbC family. PsbC subfamily.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

55577:GN03 p075
gene id: 55577:GN03_p075
uniprot id: A0A024BL26
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 Zn(2+) ion per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

55577:GN03 p059
gene id: 55577:GN03_p059
uniprot id: A0A024BKM5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

55577:GN03 p023
gene id: 55577:GN03_p023
uniprot id: A0A024BKS8
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

55577:GN03 p078
gene id: 55577:GN03_p078
uniprot id: A0A024BL55
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase A chain family.
messages: Membrane

55577:GN03 p033
gene id: 55577:GN03_p033
uniprot id: A0A024BL61
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

55577:GN03 p019
gene id: 55577:GN03_p019
uniprot id: A0A024BLB9
names: Similarity
messages: Belongs to the universal ribosomal protein uS7 family.

55577:GN03 p013
gene id: 55577:GN03_p013
uniprot id: A0A024BL80
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 6 family.
messages: Membrane

55577:GN03 p010
gene id: 55577:GN03_p010
uniprot id: A0A024BK54
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: NDH-1 shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

55577:GN03 p047
gene id: 55577:GN03_p047
uniprot id: A0A024BK25
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetG family.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

55577:GN03 p082
gene id: 55577:GN03_p082
uniprot id: A0A024BJZ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbI family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

55577:GN03 p011
gene id: 55577:GN03_p011
uniprot id: A0A024BLB5
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn.
messages: Binds 2 [4Fe-4S] clusters. Cluster 2 is most probably the spectroscopically characterized electron acceptor FA and cluster 1 is most probably FB.
messages: Cellular thylakoid membrane
messages: The cyanobacterial PSI reaction center is composed of one copy each of PsaA,B,C,D,E,F,I,J,K,L,M and X, and forms trimeric complexes.