555079:TOCE RS07170
gene id: 555079:TOCE_RS07170
uniprot id: D9RXV3
names: Function
names: Similarity
messages: Belongs to the CobU/CobP family.
messages: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.

555079:TOCE RS02180
gene id: 555079:TOCE_RS02180
uniprot id: D9S1C7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the VirD4/TraG family.
messages: Membrane

555079:TOCE RS01170
gene id: 555079:TOCE_RS01170
uniprot id: D9S084
names: Similarity
messages: Belongs to the ABC transporter superfamily.

555079:TOCE RS09050
gene id: 555079:TOCE_RS09050
uniprot id: D9RYV4
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS08525
gene id: 555079:TOCE_RS08525
uniprot id: D9RYL2
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the glycosyl hydrolase 4 family.
messages: Binds 1 NAD(+) per subunit.
messages: Homotetramer.

555079:TOCE RS00530
gene id: 555079:TOCE_RS00530
uniprot id: D9RZJ5
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS04310
gene id: 555079:TOCE_RS04310
uniprot id: D9S2K0
names: Function
names: Similarity
messages: Belongs to the WhiA family.
messages: Involved in cell division and chromosome segregation.

555079:TOCE RS03715
gene id: 555079:TOCE_RS03715
uniprot id: D9S284
names: Function
names: Similarity
messages: ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.
messages: Belongs to the ParA family. MinD subfamily.

555079:TOCE RS09115
gene id: 555079:TOCE_RS09115
uniprot id: D9RYW6
names: Similarity
messages: Belongs to the ROK (NagC/XylR) family.

555079:TOCE RS02510
gene id: 555079:TOCE_RS02510
uniprot id: D9S1J4
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. CpsB/CapC family.

555079:TOCE RS00235
gene id: 555079:TOCE_RS00235
uniprot id: D9RZE5
names: Similarity
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.

555079:TOCE RS11040
gene id: 555079:TOCE_RS11040
uniprot id: D9S0P1
names: Similarity
messages: Belongs to the ABC transporter superfamily.

555079:TOCE RS03495
gene id: 555079:TOCE_RS03495
uniprot id: D9S238
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.

555079:TOCE RS02590
gene id: 555079:TOCE_RS02590
uniprot id: D9S1L0
names: Function
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Fucose synthase subfamily.
messages: Catalyzes the two-step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.

555079:TOCE RS03115
gene id: 555079:TOCE_RS03115
uniprot id: D9S1W1
names: Similarity
messages: Belongs to the peptidase C40 family.

555079:TOCE RS04505
gene id: 555079:TOCE_RS04505
uniprot id: D9S2N9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anaerobic coproporphyrinogen-III oxidase family. HemW subfamily.
messages: Cytoplasm
messages: Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.

555079:TOCE RS05715
gene id: 555079:TOCE_RS05715
uniprot id: D9S3D2
names: Similarity
messages: Belongs to the pseudouridine synthase RsuA family.

555079:TOCE RS05095
gene id: 555079:TOCE_RS05095
uniprot id: D9S308
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

555079:TOCE RS08965
gene id: 555079:TOCE_RS08965
uniprot id: D9RYU1
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

555079:TOCE RS04540
gene id: 555079:TOCE_RS04540
uniprot id: D9S2P6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. PrmA family.
messages: Cytoplasm
messages: Methylates ribosomal protein L11.

555079:TOCE RS03590
gene id: 555079:TOCE_RS03590
uniprot id: D9S258
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Lgt family.
messages: Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
messages: Cell membrane

555079:TOCE RS00040
gene id: 555079:TOCE_RS00040
uniprot id: D9RYX7
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
messages: Belongs to the topoisomerase GyrA/ParC subunit family.
messages: Belongs to the type II topoisomerase GyrA/ParC subunit family.
messages: Cytoplasm
messages: Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.
messages: Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.

555079:TOCE RS06435
gene id: 555079:TOCE_RS06435
uniprot id: D9RYE7
names: Similarity
messages: Belongs to the transposase IS21/IS408/IS1162 family.

555079:TOCE RS07560
gene id: 555079:TOCE_RS07560
uniprot id: D9RY28
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.
messages: Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.

555079:TOCE RS08275
gene id: 555079:TOCE_RS08275
uniprot id: D9RYG5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CoaE family.
messages: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
messages: Cytoplasm

555079:TOCE RS01625
gene id: 555079:TOCE_RS01625
uniprot id: D9S0T2
names: Similarity
messages: Belongs to the precorrin methyltransferase family.

555079:TOCE RS06220
gene id: 555079:TOCE_RS06220
uniprot id: D9S3M5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 3 subfamily.
messages: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
messages: Consists of three domains: the N-terminal catalytic domain, the anticodon-binding domain and the C-terminal extension.
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS00430
gene id: 555079:TOCE_RS00430
uniprot id: D9RZH7
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

555079:TOCE RS04830
gene id: 555079:TOCE_RS04830
uniprot id: D9S2V5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PhoU family.
messages: Cytoplasm
messages: Homodimer.
messages: Plays a role in the regulation of phosphate uptake.

555079:TOCE RS03350
gene id: 555079:TOCE_RS03350
uniprot id: D9S210
names: Similarity
messages: Belongs to the acylphosphatase family.

555079:TOCE RS10560
gene id: 555079:TOCE_RS10560
uniprot id: D9S0F6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

555079:TOCE RS08490
gene id: 555079:TOCE_RS08490
uniprot id: D9RYK5
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 divalent metal cations per subunit. Magnesium or manganese.
messages: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
messages: Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
messages: In the C-terminal section; belongs to the GTP cyclohydrolase II family.
messages: In the N-terminal section; belongs to the DHBP synthase family.

555079:TOCE RS03100
gene id: 555079:TOCE_RS03100
uniprot id: D9S1V8
names: Similarity
messages: Belongs to the bacterial solute-binding protein 5 family.

555079:TOCE RS06370
gene id: 555079:TOCE_RS06370
uniprot id: D9S3Q5
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS05665
gene id: 555079:TOCE_RS05665
uniprot id: D9S3C2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50B family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS00695
gene id: 555079:TOCE_RS00695
uniprot id: D9RZM8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

555079:TOCE RS04315
gene id: 555079:TOCE_RS04315
uniprot id: D9S2K1
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain.

555079:TOCE RS00005
gene id: 555079:TOCE_RS00005
uniprot id: D9RYX0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaA family.
messages: Cytoplasm
messages: Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.

555079:TOCE RS08780
gene id: 555079:TOCE_RS08780
uniprot id: D9RYR0
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.

555079:TOCE RS08815
gene id: 555079:TOCE_RS08815
uniprot id: D9RYR8
names: Similarity
messages: Belongs to the helicase family. UvrD subfamily.

555079:TOCE RS10260
gene id: 555079:TOCE_RS10260
uniprot id: D9RZY4
names: Similarity
messages: Belongs to the V-ATPase F subunit family.

555079:TOCE RS03655
gene id: 555079:TOCE_RS03655
uniprot id: D9S272
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BioY family.
messages: Cell membrane

555079:TOCE RS05400
gene id: 555079:TOCE_RS05400
uniprot id: D9S368
names: Similarity
messages: Belongs to the DprA/Smf family.

555079:TOCE RS03435
gene id: 555079:TOCE_RS03435
uniprot id: D9S228
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
messages: Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.
messages: Cytoplasm
messages: Monomer.
messages: The C-terminal coiled-coil domain is crucial for aminoacylation activity.
messages: ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site.

555079:TOCE RS08000
gene id: 555079:TOCE_RS08000
uniprot id: D9RYB0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
messages: Belongs to the FliW family.
messages: Cytoplasm
messages: Interacts with translational regulator CsrA and flagellin(s).

555079:TOCE RS03000
gene id: 555079:TOCE_RS03000
uniprot id: D9S1T9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
messages: Catalyzes phosphorolysis of the pyrimidine nucleosides uridine, thymidine and 2'-deoxyuridine with the formation of the corresponding pyrimidine base and ribose-1-phosphate.
messages: Homodimer.

555079:TOCE RS10585
gene id: 555079:TOCE_RS10585
uniprot id: D9S0G1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Cell membrane
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.

555079:TOCE RS00790
gene id: 555079:TOCE_RS00790
uniprot id: D9S017
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

555079:TOCE RS03825
gene id: 555079:TOCE_RS03825
uniprot id: D9S2A6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
messages: Cytoplasm
messages: Monomer.

555079:TOCE RS00715
gene id: 555079:TOCE_RS00715
uniprot id: D9RZN2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family.
messages: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
messages: Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis. Some bacteria have evolved a zinc-coordinating structure that stabilizes the LID domain.
messages: Cytoplasm
messages: Monomer.

555079:TOCE RS05260
gene id: 555079:TOCE_RS05260
uniprot id: D9S341
names: Similarity
messages: Belongs to the fabD family.

555079:TOCE RS02875
gene id: 555079:TOCE_RS02875
uniprot id: D9S1R4
names: Similarity
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Homodimer.

555079:TOCE RS02335
gene id: 555079:TOCE_RS02335
uniprot id: D9S1G1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
messages: Catalyzes the sodium-dependent transport of glutamate.
messages: Cell membrane

555079:TOCE RS04020
gene id: 555079:TOCE_RS04020
uniprot id: D9S2E1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
messages: Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
messages: Homodimer.

555079:TOCE RS07365
gene id: 555079:TOCE_RS07365
uniprot id: D9RXZ2
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.

555079:TOCE RS05810
gene id: 555079:TOCE_RS05810
uniprot id: D9S3E5
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M42 family.
messages: Binds 2 divalent metal cations per subunit.

555079:TOCE RS04420
gene id: 555079:TOCE_RS04420
uniprot id: D9S2M2
names: Caution
names: Function
names: Similarity
messages: Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor.
messages: Belongs to the biotin--protein ligase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS09560
gene id: 555079:TOCE_RS09560
uniprot id: D9RZ75
names: Subcellular Location Annotation
messages: Cytoplasm

555079:TOCE RS07945
gene id: 555079:TOCE_RS07945
uniprot id: D9RYA0
names: Function
names: Similarity
messages: Antitoxin component of a type II toxin-antitoxin (TA) system.
messages: Belongs to the phD/YefM antitoxin family.

555079:TOCE RS08995
gene id: 555079:TOCE_RS08995
uniprot id: D9RYU7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transcriptional regulatory Rex family.
messages: Cytoplasm
messages: Homodimer.
messages: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.

555079:TOCE RS07320
gene id: 555079:TOCE_RS07320
uniprot id: D9RXY3
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS05075
gene id: 555079:TOCE_RS05075
uniprot id: D9S304
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.
messages: Homodimer.
messages: Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS00215
gene id: 555079:TOCE_RS00215
uniprot id: D9RZE1
names: Function
names: Similarity
names: Subunit
messages: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer).
messages: Homodimer.
messages: In the C-terminal section; belongs to the MurCDEF family.

555079:TOCE RS09880
gene id: 555079:TOCE_RS09880
uniprot id: D9RZR1
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS03035
gene id: 555079:TOCE_RS03035
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS10945
gene id: 555079:TOCE_RS10945
uniprot id: D9S0M2
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

555079:TOCE RS02645
gene id: 555079:TOCE_RS02645
uniprot id: D9S1M2
names: Similarity
messages: Belongs to the CRISPR-associated Cas10/Csm1 family.

555079:TOCE RS06915
gene id: 555079:TOCE_RS06915
uniprot id: D9RXR6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NAD synthetase family.
messages: Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
messages: Homodimer.

555079:TOCE RS04500
gene id: 555079:TOCE_RS04500
uniprot id: D9S2N8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
messages: Cell membrane
messages: Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.

555079:TOCE RS05570
gene id: 555079:TOCE_RS05570
uniprot id: D9S3A2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GTP-binding SRP family.
messages: Cell membrane
messages: Membrane
messages: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum.

555079:TOCE RS00995
gene id: 555079:TOCE_RS00995
uniprot id: D9RYE7
names: Similarity
messages: Belongs to the transposase IS21/IS408/IS1162 family.

555079:TOCE RS04730
gene id: 555079:TOCE_RS04730
uniprot id: D9S2T5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family.
messages: Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).
messages: Cytoplasm

555079:TOCE RS04695
gene id: 555079:TOCE_RS04695
uniprot id: D9S2S8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MraZ family.
messages: Forms oligomers.
messages: nucleoid

555079:TOCE RS09550
gene id: 555079:TOCE_RS09550
uniprot id: D9RZ73
names: Similarity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.

555079:TOCE RS05230
gene id: 555079:TOCE_RS05230
uniprot id: D9S335
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

555079:TOCE RS08485
gene id: 555079:TOCE_RS08485
uniprot id: D9RYK4
names: Function
names: Similarity
messages: Belongs to the DMRL synthase family.
messages: Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.

555079:TOCE RS05550
gene id: 555079:TOCE_RS05550
uniprot id: D9S398
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliQ/MopD/SpaQ family.
messages: Cell membrane
messages: Membrane
messages: Role in flagellar biosynthesis.

555079:TOCE RS00635
gene id: 555079:TOCE_RS00635
uniprot id: D9RZL6
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

555079:TOCE RS09165
gene id: 555079:TOCE_RS09165
uniprot id: D9RYZ5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SmpB family.
messages: Cytoplasm
messages: Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.

555079:TOCE RS00670
gene id: 555079:TOCE_RS00670
uniprot id: D9RZM3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL24 family.
messages: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
messages: One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit.

555079:TOCE RS07360
gene id: 555079:TOCE_RS07360
uniprot id: D9RXZ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ThiI family.
messages: Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
messages: Cytoplasm

555079:TOCE RS05925
gene id: 555079:TOCE_RS05925
uniprot id: D9S3G9
names: Function
names: Similarity
messages: Belongs to the DNA mismatch repair MutL/HexB family.
messages: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.

555079:TOCE RS08645
gene id: 555079:TOCE_RS08645
uniprot id: D9RYN4
names: Similarity
messages: Belongs to the V-ATPase E subunit family.

555079:TOCE RS00765
gene id: 555079:TOCE_RS00765
uniprot id: D9RZP2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell membrane
messages: Membrane
messages: Part of an ABC transporter complex. Responsible for energy coupling to the transport system.

555079:TOCE RS03530
gene id: 555079:TOCE_RS03530
uniprot id: D9S245
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
messages: Binds 3 [4Fe-4S] clusters.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

555079:TOCE RS08705
gene id: 555079:TOCE_RS08705
uniprot id: D9RYP6
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the RtcB family.
messages: Binds 2 manganese ions per subunit.
messages: Monomer.

555079:TOCE RS04625
gene id: 555079:TOCE_RS04625
uniprot id: D9S2R3
names: Similarity
messages: Belongs to the PEP-utilizing enzyme family.

555079:TOCE RS11705
gene id: 555079:TOCE_RS11705
uniprot id: D9RYI0
names: Similarity
messages: Belongs to the 5'-nucleotidase family.

555079:TOCE RS04220
gene id: 555079:TOCE_RS04220
uniprot id: D9S2I1
names: Similarity
messages: Belongs to the PGI/PMI family.

555079:TOCE RS11190
gene id: 555079:TOCE_RS11190
uniprot id: D9S150
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

555079:TOCE RS10105
gene id: 555079:TOCE_RS10105
uniprot id: D9RZV6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cytoplasm
messages: Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.
messages: Forms polymers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS00460
gene id: 555079:TOCE_RS00460
uniprot id: D9RZI3
names: Similarity
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.

555079:TOCE RS08985
gene id: 555079:TOCE_RS08985
uniprot id: D9RYU5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0316 family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS01820
gene id: 555079:TOCE_RS01820
uniprot id: D9S0X0
names: Function
names: Subunit
messages: Catalyzes the synthesis of GMP from XMP.
messages: Homodimer.

555079:TOCE RS04005
gene id: 555079:TOCE_RS04005
uniprot id: D9S2D8
names: Similarity
messages: Belongs to the formate--tetrahydrofolate ligase family.

555079:TOCE RS10420
gene id: 555079:TOCE_RS10420
uniprot id: D9S012
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

555079:TOCE RS10145
gene id: 555079:TOCE_RS10145
uniprot id: D9RZW4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.

555079:TOCE RS10570
gene id: 555079:TOCE_RS10570
uniprot id: D9S0F8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

555079:TOCE RS09150
gene id: 555079:TOCE_RS09150
uniprot id: D9RYZ2
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS04140
gene id: 555079:TOCE_RS04140
uniprot id: D9S2G5
names: Similarity
messages: Belongs to the phosphate acetyltransferase and butyryltransferase family.

555079:TOCE RS03840
gene id: 555079:TOCE_RS03840
uniprot id: D9S2A9
names: Similarity
messages: Belongs to the LytR/CpsA/Psr (LCP) family.

555079:TOCE RS08760
gene id: 555079:TOCE_RS08760
uniprot id: D9RYQ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS06810
gene id: 555079:TOCE_RS06810
uniprot id: D9RXP4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.
messages: An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.
messages: Belongs to the DTD family.
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS08960
gene id: 555079:TOCE_RS08960
uniprot id: D9RYU0
names: Similarity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.

555079:TOCE RS01090
gene id: 555079:TOCE_RS01090
uniprot id: D9S068
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS11370
gene id: 555079:TOCE_RS11370
uniprot id: D9S183
names: Subcellular Location Annotation
messages: Cell membrane

555079:TOCE RS08860
gene id: 555079:TOCE_RS08860
uniprot id: D9RYS7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Cytoplasm
messages: Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

555079:TOCE RS09935
gene id: 555079:TOCE_RS09935
uniprot id: D9RZS2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PlsY family.
messages: Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Probably interacts with PlsX.

555079:TOCE RS01775
gene id: 555079:TOCE_RS01775
uniprot id: D9S0W1
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: A lyase-type mechanism (elimination/hydration) is suggested for the cleavage of the lactyl ether bond of MurNAc 6-phosphate, with the formation of an alpha,beta-unsaturated aldehyde intermediate with (E)-stereochemistry, followed by the syn addition of water to give product.
messages: Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
messages: Homodimer.
messages: Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D-lactate.

555079:TOCE RS09300
gene id: 555079:TOCE_RS09300
uniprot id: D9RZ21
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS00775
gene id: 555079:TOCE_RS00775
uniprot id: D9RZP4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the energy-coupling factor EcfT family.
messages: Cell membrane
messages: Forms a stable energy-coupling factor (ECF) transporter complex composed of 2 membrane-embedded substrate-binding proteins (S component), 2 ATP-binding proteins (A component) and 2 transmembrane proteins (T component). May be able to interact with more than 1 S component at a time (By similarity).
messages: Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.

555079:TOCE RS10690
gene id: 555079:TOCE_RS10690
uniprot id: D9S0H8
names: Domain
names: Function
names: Similarity
messages: Belongs to the RecA family. RadA subfamily.
messages: DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
messages: Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.
messages: The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease.

555079:TOCE RS06175
gene id: 555079:TOCE_RS06175
uniprot id: D9S3L6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.

555079:TOCE RS09450
gene id: 555079:TOCE_RS09450
uniprot id: D9RZ51
names: Cofactor
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.

555079:TOCE RS08385
gene id: 555079:TOCE_RS08385
uniprot id: D9RYI4
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS00510
gene id: 555079:TOCE_RS00510
uniprot id: D9RZJ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site.
messages: Cytoplasm
messages: In the C-terminal section; belongs to the helicase family. RecG subfamily.
messages: In the N-terminal section; belongs to the UvrB family.

555079:TOCE RS04510
gene id: 555079:TOCE_RS04510
uniprot id: D9S2P0
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

555079:TOCE RS08170
gene id: 555079:TOCE_RS08170
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS09545
gene id: 555079:TOCE_RS09545
uniprot id: D9RZ72
names: Similarity
messages: Belongs to the KHG/KDPG aldolase family.

555079:TOCE RS10170
gene id: 555079:TOCE_RS10170
uniprot id: D9RZW9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase A chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
messages: Membrane

555079:TOCE RS10140
gene id: 555079:TOCE_RS10140
uniprot id: D9RZW3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.

555079:TOCE RS01355
gene id: 555079:TOCE_RS01355
uniprot id: D9S0B7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of tryptophan to tRNA(Trp).
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS07930
gene id: 555079:TOCE_RS07930
uniprot id: D9RY97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum
messages: Belongs to the FliD family.
messages: Homopentamer.
messages: Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
messages: Secreted

555079:TOCE RS03265
gene id: 555079:TOCE_RS03265
uniprot id: D9S1Z3
names: Similarity
messages: Belongs to the CdaR family.

555079:TOCE RS02985
gene id: 555079:TOCE_RS02985
uniprot id: D9S1T6
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS06815
gene id: 555079:TOCE_RS06815
uniprot id: D9RXP5
names: Function
names: Similarity
messages: Belongs to the relA/spoT family.
messages: In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.

555079:TOCE RS10300
gene id: 555079:TOCE_RS10300
uniprot id: D9RZZ1
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. SigI subfamily.
messages: Cytoplasm
messages: Interacts with RsgI.
messages: Negatively regulated by the anti-sigma-I factor RsgI.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

555079:TOCE RS11435
gene id: 555079:TOCE_RS11435
uniprot id: D9S196
names: Similarity
messages: Belongs to the diacylglycerol/lipid kinase family.

555079:TOCE RS00625
gene id: 555079:TOCE_RS00625
uniprot id: D9RZL4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

555079:TOCE RS01140
gene id: 555079:TOCE_RS01140
uniprot id: D9S078
names: Cofactor
names: Similarity
messages: Belongs to the rubredoxin family.
messages: Binds 1 Fe(3+) ion per subunit.

555079:TOCE RS03370
gene id: 555079:TOCE_RS03370
uniprot id: D9S214
names: Similarity
messages: Belongs to the UPF0047 family.

555079:TOCE RS00330
gene id: 555079:TOCE_RS00330
uniprot id: D9RZG0
names: Cofactor
names: Similarity
messages: Belongs to the Fur family.
messages: Binds 1 Mn(2+) or Fe(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.

555079:TOCE RS05850
gene id: 555079:TOCE_RS05850
uniprot id: D9S3F4
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

555079:TOCE RS00620
gene id: 555079:TOCE_RS00620
uniprot id: D9RZL3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL4 family.
messages: Forms part of the polypeptide exit tunnel.
messages: One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: Part of the 50S ribosomal subunit.

555079:TOCE RS11290
gene id: 555079:TOCE_RS11290
uniprot id: D9S171
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS00690
gene id: 555079:TOCE_RS00690
uniprot id: D9RZM7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL6 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

555079:TOCE RS04605
gene id: 555079:TOCE_RS04605
uniprot id: D9S2Q9
names: Function
names: Similarity
messages: Belongs to the RecO family.
messages: Involved in DNA repair and RecF pathway recombination.

555079:TOCE RS01690
gene id: 555079:TOCE_RS01690
uniprot id: D9S0U4
names: Cofactor
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. NagA family.
messages: Binds 1 divalent metal cation per subunit.

555079:TOCE RS04655
gene id: 555079:TOCE_RS04655
uniprot id: D9S2S0
names: Similarity
messages: Belongs to the GTP cyclohydrolase I type 2/NIF3 family.

555079:TOCE RS04275
gene id: 555079:TOCE_RS04275
uniprot id: D9S2J3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a magnesium transporter.
messages: Belongs to the SLC41A transporter family.
messages: Cell membrane
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

555079:TOCE RS05315
gene id: 555079:TOCE_RS05315
uniprot id: D9S352
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A probable RNA chaperone. Forms a complex with KhpB which binds to cellular RNA and controls its expression. Plays a role in peptidoglycan (PG) homeostasis and cell length regulation.
messages: Belongs to the KhpA RNA-binding protein family.
messages: Cytoplasm
messages: Forms a complex with KhpB.

555079:TOCE RS00520
gene id: 555079:TOCE_RS00520
uniprot id: D9RZJ4
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Cytoplasm
messages: Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS02100
gene id: 555079:TOCE_RS02100
uniprot id: D9S124
names: Similarity
messages: Belongs to the GSP E family.

555079:TOCE RS09910
gene id: 555079:TOCE_RS09910
uniprot id: D9RZR7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS06970
gene id: 555079:TOCE_RS06970
uniprot id: D9RXS1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits).
messages: In the C-terminal section; belongs to the transpeptidase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 51 family.
messages: Membrane

555079:TOCE RS05460
gene id: 555079:TOCE_RS05460
uniprot id: D9S380
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliG family.
messages: Membrane

555079:TOCE RS10155
gene id: 555079:TOCE_RS10155
uniprot id: D9RZW6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase delta chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.

555079:TOCE RS10645
gene id: 555079:TOCE_RS10645
uniprot id: D9S0G9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MrnC RNase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors.

555079:TOCE RS11570
gene id: 555079:TOCE_RS11570
uniprot id: D9S0S3
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS01495
gene id: 555079:TOCE_RS01495
uniprot id: D9S0Q7
names: Similarity
messages: Belongs to the FemABX family.

555079:TOCE RS10280
gene id: 555079:TOCE_RS10280
uniprot id: D9RZY8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the V-ATPase 116 kDa subunit family.
messages: Membrane

555079:TOCE RS10125
gene id: 555079:TOCE_RS10125
uniprot id: D9RZW0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EPSP synthase family. MurA subfamily.
messages: Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS07410
gene id: 555079:TOCE_RS07410
uniprot id: D9RXZ8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the metallo-dependent hydrolases superfamily. HutI family.
messages: Binds 1 zinc or iron ion per subunit.
messages: Catalyzes the hydrolytic cleavage of the carbon-nitrogen bond in imidazolone-5-propanoate to yield N-formimidoyl-L-glutamate. It is the third step in the universal histidine degradation pathway.
messages: Cytoplasm

555079:TOCE RS04195
gene id: 555079:TOCE_RS04195
uniprot id: D9S2H6
names: Similarity
messages: Belongs to the peptidase M29 family.

555079:TOCE RS07575
gene id: 555079:TOCE_RS07575
uniprot id: D9RY31
names: Function
names: Similarity
messages: Belongs to the AIR carboxylase family. Class I subfamily.
messages: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).

555079:TOCE RS05530
gene id: 555079:TOCE_RS05530
uniprot id: D9S394
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliN/MopA/SpaO family.
messages: Membrane

555079:TOCE RS11085
gene id: 555079:TOCE_RS11085
uniprot id: D9S129
names: Function
names: Similarity
messages: Belongs to the aspartate/glutamate racemases family.
messages: Provides the (R)-glutamate required for cell wall biosynthesis.

555079:TOCE RS02535
gene id: 555079:TOCE_RS02535
uniprot id: D9S1J9
names: Similarity
messages: Belongs to the CpsD/CapB family.

555079:TOCE RS01695
gene id: 555079:TOCE_RS01695
uniprot id: D9S0U5
names: Similarity
messages: Belongs to the EamA transporter family.

555079:TOCE RS01125
gene id: 555079:TOCE_RS01125
uniprot id: D9S075
names: Similarity
messages: In the N-terminal section; belongs to the zinc metallo-hydrolase group 3 family.

555079:TOCE RS05145
gene id: 555079:TOCE_RS05145
uniprot id: D9S318
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ribulose-phosphate 3-epimerase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.

555079:TOCE RS05290
gene id: 555079:TOCE_RS05290
uniprot id: D9S347
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SMC family.
messages: Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.
messages: Cytoplasm
messages: Homodimer.
messages: Required for chromosome condensation and partitioning.

555079:TOCE RS12670
gene id: 555079:TOCE_RS12670
uniprot id: D9RZ77
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS02885
gene id: 555079:TOCE_RS02885
uniprot id: D9S1R6
names: Cofactor
names: Similarity
messages: Belongs to the PTPS family. QueD subfamily.
messages: Binds 1 zinc ion per subunit.

555079:TOCE RS10805
gene id: 555079:TOCE_RS10805
uniprot id: D9S0K1
names: Function
names: Similarity
messages: Belongs to the RecR family.
messages: May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.

555079:TOCE RS08735
gene id: 555079:TOCE_RS08735
uniprot id: D9RYQ2
names: Similarity
messages: Belongs to the glycosyl hydrolase 13 family.

555079:TOCE RS01290
gene id: 555079:TOCE_RS01290
uniprot id: D9S0A6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the prokaryotic Ku family.
messages: Homodimer. Interacts with LigD.
messages: With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD.

555079:TOCE RS06145
gene id: 555079:TOCE_RS06145
uniprot id: D9S3L0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polyribonucleotide nucleotidyltransferase family.
messages: Cytoplasm
messages: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.

555079:TOCE RS00665
gene id: 555079:TOCE_RS00665
uniprot id: D9RZM2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

555079:TOCE RS09960
gene id: 555079:TOCE_RS09960
uniprot id: D9RZS7
names: Function
names: Subcellular Location Annotation
messages: Membrane
messages: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.

555079:TOCE RS09310
gene id: 555079:TOCE_RS09310
uniprot id: D9RZ23
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
messages: Mediates influx of magnesium ions.
messages: Membrane

555079:TOCE RS05940
gene id: 555079:TOCE_RS05940
uniprot id: D9S3H2
names: Similarity
messages: Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family.

555079:TOCE RS08235
gene id: 555079:TOCE_RS08235
uniprot id: D9RYF7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the branched-chain polyamine synthase family.
messages: Cytoplasm
messages: Involved in the biosynthesis of branched-chain polyamines, which support the growth of thermophiles under high-temperature conditions. Catalyzes the sequential condensation of spermidine with the aminopropyl groups of decarboxylated S-adenosylmethionines to produce N(4)-bis(aminopropyl)spermidine via N(4)-aminopropylspermidine.

555079:TOCE RS02720
gene id: 555079:TOCE_RS02720
uniprot id: D9S1N6
names: Similarity
messages: Belongs to the glycosyl hydrolase 38 family.

555079:TOCE RS00650
gene id: 555079:TOCE_RS00650
uniprot id: D9RZL9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

555079:TOCE RS04475
gene id: 555079:TOCE_RS04475
uniprot id: D9S2N3
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.
messages: Binds directly to 16S ribosomal RNA.

555079:TOCE RS05430
gene id: 555079:TOCE_RS05430
uniprot id: D9S374
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CodY family.
messages: Cytoplasm
messages: DNA-binding global transcriptional regulator which is involved in the adaptive response to starvation and acts by directly or indirectly controlling the expression of numerous genes in response to nutrient availability. During rapid exponential growth, CodY is highly active and represses genes whose products allow adaptation to nutrient depletion.

555079:TOCE RS00105
gene id: 555079:TOCE_RS00105
uniprot id: D9RZC0
names: Similarity
messages: Belongs to the ThiD family.

555079:TOCE RS02425
gene id: 555079:TOCE_RS02425
uniprot id: D9S1H9
names: Similarity
messages: Belongs to the pseudouridine synthase TruD family.

555079:TOCE RS05835
gene id: 555079:TOCE_RS05835
uniprot id: D9S3F0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SurE nucleotidase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Cytoplasm
messages: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

555079:TOCE RS04190
gene id: 555079:TOCE_RS04190
uniprot id: D9S2H5
names: Cofactor
names: Similarity
messages: Belongs to the organic radical-activating enzymes family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.

555079:TOCE RS05025
gene id: 555079:TOCE_RS05025
uniprot id: D9S2Z4
names: Subcellular Location Annotation
messages: Cytoplasm

555079:TOCE RS03300
gene id: 555079:TOCE_RS03300
uniprot id: D9S200
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatC family.
messages: Heterotrimer of A, B and C subunits.

555079:TOCE RS00740
gene id: 555079:TOCE_RS00740
uniprot id: D9RZN7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

555079:TOCE RS01700
gene id: 555079:TOCE_RS01700
uniprot id: D9S0U6
names: Similarity
messages: Belongs to the BlaI transcriptional regulatory family.

555079:TOCE RS05535
gene id: 555079:TOCE_RS05535
uniprot id: D9S395
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS09340
gene id: 555079:TOCE_RS09340
uniprot id: D9RZ29
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoglycerate kinase family.
messages: Cytoplasm
messages: Monomer.

555079:TOCE RS07185
gene id: 555079:TOCE_RS07185
uniprot id: D9RXV6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PEP-utilizing enzyme family.
messages: Cytoplasm
messages: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).

555079:TOCE RS07310
gene id: 555079:TOCE_RS07310
uniprot id: D9RXY1
names: Cofactor
names: Similarity
messages: Belongs to the AlaDH/PNT family.
messages: Binds 1 Mg(2+) ion per subunit.

555079:TOCE RS01410
gene id: 555079:TOCE_RS01410
uniprot id: D9S0C6
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS05630
gene id: 555079:TOCE_RS05630
uniprot id: D9S3B4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
messages: Cytoplasm
messages: Homodimer. Forms a heterotetramer with IscU, interacts with other sulfur acceptors.
messages: Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.

555079:TOCE RS07855
gene id: 555079:TOCE_RS07855
uniprot id: D9RY82
names: Cofactor
names: Function
names: Subunit
messages: Binds 2 [4Fe-4S] clusters. In this family the first cluster has a non-standard and varying [4Fe-4S] binding motif CX(2)CX(2)CX(4-5)CP.
messages: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
messages: Heterodimer of the IorA and IorB subunits.

555079:TOCE RS11500
gene id: 555079:TOCE_RS11500
uniprot id: D9S1A9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MnmG family.
messages: Cytoplasm
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.

555079:TOCE RS03520
gene id: 555079:TOCE_RS03520
uniprot id: D9S243
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell membrane
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

555079:TOCE RS00810
gene id: 555079:TOCE_RS00810
uniprot id: D9S021
names: Function
names: Similarity
messages: Belongs to the CobT family.
messages: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).

555079:TOCE RS00010
gene id: 555079:TOCE_RS00010
uniprot id: D9RYX1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the beta sliding clamp family.
messages: Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.
messages: Cytoplasm
messages: Forms a ring-shaped head-to-tail homodimer around DNA.

555079:TOCE RS03515
gene id: 555079:TOCE_RS03515
uniprot id: D9S242
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RnfG family.
messages: Cell membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

555079:TOCE RS07245
gene id: 555079:TOCE_RS07245
uniprot id: D9RXW9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transaldolase family. Type 3B subfamily.
messages: Cytoplasm
messages: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

555079:TOCE RS05110
gene id: 555079:TOCE_RS05110
uniprot id: D9S311
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the polypeptide deformylase family.
messages: Binds 1 Fe(2+) ion.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.

555079:TOCE RS04215
gene id: 555079:TOCE_RS04215
uniprot id: D9S2I0
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the HPrK/P family.
messages: Both phosphorylation and phosphorolysis are carried out by the same active site and suggest a common mechanism for both reactions.
messages: Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK/P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport: it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion.
messages: Homohexamer.
messages: The Walker A ATP-binding motif also binds Pi and PPi.

555079:TOCE RS08225
gene id: 555079:TOCE_RS08225
uniprot id: D9RYF5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
messages: Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
messages: Cytoplasm
messages: IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).
messages: Monomer.

555079:TOCE RS00820
gene id: 555079:TOCE_RS00820
uniprot id: D9S023
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the branched chain amino acid transporter family.
messages: Cell membrane
messages: Component of the transport system for branched-chain amino acids.
messages: Membrane

555079:TOCE RS08540
gene id: 555079:TOCE_RS08540
uniprot id: D9RYL5
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS08845
gene id: 555079:TOCE_RS08845
uniprot id: D9RYS4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: By heat shock.
messages: Cytoplasm
messages: Homohexamer. Organized in a ring with a central cavity.

555079:TOCE RS02470
gene id: 555079:TOCE_RS02470
uniprot id: D9S1I6
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS00700
gene id: 555079:TOCE_RS00700
uniprot id: D9RZM9
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS5 family.
messages: Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.
messages: Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.
messages: The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S4 and S12 plays an important role in translational accuracy.

555079:TOCE RS05650
gene id: 555079:TOCE_RS05650
uniprot id: D9S3C0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
messages: Membrane

555079:TOCE RS06325
gene id: 555079:TOCE_RS06325
uniprot id: D9S3P6
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

555079:TOCE RS06065
gene id: 555079:TOCE_RS06065
uniprot id: D9S3J6
names: Function
names: Similarity
messages: Belongs to the 2H phosphoesterase superfamily. ThpR family.
messages: Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'-phosphomonoester.

555079:TOCE RS11140
gene id: 555079:TOCE_RS11140
uniprot id: D9S141
names: Similarity
messages: Belongs to the glutamine synthetase family.

555079:TOCE RS07035
gene id: 555079:TOCE_RS07035
uniprot id: D9RXT4
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

555079:TOCE RS05280
gene id: 555079:TOCE_RS05280
uniprot id: D9S345
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribonuclease III family.
messages: Cytoplasm
messages: Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
messages: Homodimer.

555079:TOCE RS03060
gene id: 555079:TOCE_RS03060
uniprot id: D9S1V1
names: Similarity
messages: Belongs to the asparagine synthetase family.

555079:TOCE RS07045
gene id: 555079:TOCE_RS07045
uniprot id: D9RXT6
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS11360
gene id: 555079:TOCE_RS11360
uniprot id: D9S181
names: Function
names: Similarity
messages: Belongs to the helicase family. DnaB subfamily.
messages: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity.

555079:TOCE RS02700
gene id: 555079:TOCE_RS02700
uniprot id: D9S1N2
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

555079:TOCE RS02965
gene id: 555079:TOCE_RS02965
uniprot id: D9S1T2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell membrane
messages: Membrane
messages: Part of an ABC transporter complex. Responsible for energy coupling to the transport system.

555079:TOCE RS04770
gene id: 555079:TOCE_RS04770
uniprot id: D9S2U3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.
messages: Cell membrane
messages: Self-interacts. Interacts with FtsZ.

555079:TOCE RS00390
gene id: 555079:TOCE_RS00390
uniprot id: D9RZH0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endoribonuclease Cas2 protein family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas1 homodimer.

555079:TOCE RS05405
gene id: 555079:TOCE_RS05405
uniprot id: D9S369
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type IA topoisomerase family.
messages: Monomer.
messages: Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.

555079:TOCE RS03845
gene id: 555079:TOCE_RS03845
uniprot id: D9S2B0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Iojap/RsfS family.
messages: Cytoplasm
messages: Functions as a ribosomal silencing factor. Interacts with ribosomal protein uL14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
messages: Interacts with ribosomal protein uL14 (rplN).

555079:TOCE RS06865
gene id: 555079:TOCE_RS06865
uniprot id: D9RXQ6
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the queuine tRNA-ribosyltransferase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).
messages: Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1.

555079:TOCE RS10385
gene id: 555079:TOCE_RS10385
uniprot id: D9S005
names: Similarity
messages: Belongs to the low molecular weight phosphotyrosine protein phosphatase family.

555079:TOCE RS06245
gene id: 555079:TOCE_RS06245
uniprot id: D9S3N0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
messages: Membrane

555079:TOCE RS00125
gene id: 555079:TOCE_RS00125
uniprot id: D9RZC3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pyrroline-5-carboxylate reductase family.
messages: Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
messages: Cytoplasm

555079:TOCE RS04545
gene id: 555079:TOCE_RS04545
uniprot id: D9S2P7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNA methyltransferase RsmE family.
messages: Cytoplasm
messages: Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.

555079:TOCE RS01555
gene id: 555079:TOCE_RS01555
uniprot id: D9S0R8
names: Similarity
messages: Belongs to the ComB family.

555079:TOCE RS11460
gene id: 555079:TOCE_RS11460
uniprot id: D9S1A1
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.

555079:TOCE RS01990
gene id: 555079:TOCE_RS01990
uniprot id: D9S105
names: Function
names: Similarity
messages: Belongs to the LarC family.
messages: Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes.

555079:TOCE RS08570
gene id: 555079:TOCE_RS08570
uniprot id: D9RYM1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecA family.
messages: Cell membrane
messages: Cytoplasm
messages: Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.

555079:TOCE RS09350
gene id: 555079:TOCE_RS09350
uniprot id: D9RZ31
names: Similarity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.

555079:TOCE RS03720
gene id: 555079:TOCE_RS03720
uniprot id: D9S285
names: Function
names: Similarity
messages: Belongs to the MinE family.
messages: Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.

555079:TOCE RS01395
gene id: 555079:TOCE_RS01395
uniprot id: D9S0C3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CutC family.
messages: Cytoplasm
messages: Once thought to be involved in copper homeostasis, experiments in E.coli have shown this is not the case.

555079:TOCE RS08260
gene id: 555079:TOCE_RS08260
uniprot id: D9RYG2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Homotetramer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

555079:TOCE RS00640
gene id: 555079:TOCE_RS00640
uniprot id: D9RZL7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.

555079:TOCE RS04430
gene id: 555079:TOCE_RS04430
uniprot id: D9S2M4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DapB family.
messages: Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction.

555079:TOCE RS03955
gene id: 555079:TOCE_RS03955
uniprot id: D9S2C8
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS06160
gene id: 555079:TOCE_RS06160
uniprot id: D9S3L3
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
messages: Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.

555079:TOCE RS08655
gene id: 555079:TOCE_RS08655
uniprot id: D9RYN6
names: Function
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.

555079:TOCE RS03680
gene id: 555079:TOCE_RS03680
uniprot id: D9S277
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Maf family. YhdE subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.

555079:TOCE RS07340
gene id: 555079:TOCE_RS07340
uniprot id: D9RXY7
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS03280
gene id: 555079:TOCE_RS03280
uniprot id: D9S1Z6
names: Similarity
messages: Belongs to the UxaA family.

555079:TOCE RS01405
gene id: 555079:TOCE_RS01405
uniprot id: D9S0C5
names: Similarity
messages: Belongs to the UPF0173 family.

555079:TOCE RS04700
gene id: 555079:TOCE_RS04700
uniprot id: D9S2S9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmH family.
messages: Cytoplasm
messages: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.

555079:TOCE RS01075
gene id: 555079:TOCE_RS01075
uniprot id: D9S065
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptide transporter carbon starvation (CstA) (TC 2.A.114) family.
messages: Membrane

555079:TOCE RS00475
gene id: 555079:TOCE_RS00475
uniprot id: D9RZI6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS10855
gene id: 555079:TOCE_RS10855
uniprot id: D9S0K8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2).
messages: Homodimer.

555079:TOCE RS08480
gene id: 555079:TOCE_RS08480
uniprot id: D9RYK3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily.
messages: Cell membrane
messages: Homodimer. Forms a membrane-associated complex with FtsX.
messages: Part of the ABC transporter FtsEX involved in cellular division.

555079:TOCE RS01920
gene id: 555079:TOCE_RS01920
uniprot id: D9S0Z1
names: Similarity
messages: Belongs to the NadC/ModD family.

555079:TOCE RS07000
gene id: 555079:TOCE_RS07000
uniprot id: D9RXS7
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

555079:TOCE RS00605
gene id: 555079:TOCE_RS00605
uniprot id: D9RZL0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

555079:TOCE RS03215
gene id: 555079:TOCE_RS03215
uniprot id: D9S1Y0
names: Function
names: Similarity
messages: ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.

555079:TOCE RS01460
gene id: 555079:TOCE_RS01460
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS01620
gene id: 555079:TOCE_RS01620
uniprot id: D9S0T1
names: Similarity
messages: Belongs to the precorrin methyltransferase family.

555079:TOCE RS10530
gene id: 555079:TOCE_RS10530
uniprot id: D9S0F3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

555079:TOCE RS04870
gene id: 555079:TOCE_RS04870
uniprot id: D9S2W3
names: Function
names: Similarity
names: Subunit
messages: Associates with the 50S ribosomal subunit.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
messages: GTPase that plays an essential role in the late steps of ribosome biogenesis.

555079:TOCE RS01995
gene id: 555079:TOCE_RS01995
uniprot id: D9S106
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
messages: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

555079:TOCE RS07440
gene id: 555079:TOCE_RS07440
uniprot id: D9RY04
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SspI family.
messages: Expressed only in the forespore compartment of sporulating cells.
messages: Spore core

555079:TOCE RS05345
gene id: 555079:TOCE_RS05345
uniprot id: D9S358
names: Similarity
messages: Belongs to the UPF0102 family.

555079:TOCE RS05100
gene id: 555079:TOCE_RS05100
uniprot id: D9S309
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 FMN per subunit.
messages: Catalyzes two sequential steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine. In the second step the latter compound is decarboxylated to form 4'-phosphopantotheine.
messages: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine.
messages: In the C-terminal section; belongs to the PPC synthetase family.
messages: In the N-terminal section; belongs to the HFCD (homo-oligomeric flavin containing Cys decarboxylase) superfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS09795
gene id: 555079:TOCE_RS09795
uniprot id: D9RZP7
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

555079:TOCE RS10425
gene id: 555079:TOCE_RS10425
uniprot id: D9S013
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS04710
gene id: 555079:TOCE_RS04710
uniprot id: D9S2T1
names: Similarity
messages: Belongs to the transpeptidase family.

555079:TOCE RS09335
gene id: 555079:TOCE_RS09335
uniprot id: D9RZ28
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the triosephosphate isomerase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P).

555079:TOCE RS00020
gene id: 555079:TOCE_RS00020
uniprot id: D9RYX3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecF family.
messages: Cytoplasm
messages: The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.

555079:TOCE RS10405
gene id: 555079:TOCE_RS10405
uniprot id: D9S009
names: Caution
names: Function
names: Similarity
messages: Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif.

555079:TOCE RS00710
gene id: 555079:TOCE_RS00710
uniprot id: D9RZN1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecY/SEC61-alpha family.
messages: Cell membrane
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Membrane
messages: The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.

555079:TOCE RS02585
gene id: 555079:TOCE_RS02585
uniprot id: D9S1K9
names: Caution
names: Function
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.
messages: Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS04120
gene id: 555079:TOCE_RS04120
uniprot id: D9S2G1
names: Similarity
messages: Belongs to the phosphohexose mutase family.

555079:TOCE RS05200
gene id: 555079:TOCE_RS05200
uniprot id: D9S329
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS03480
gene id: 555079:TOCE_RS03480
uniprot id: D9S235
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

555079:TOCE RS01325
gene id: 555079:TOCE_RS01325
uniprot id: D9S0B3
names: Similarity
messages: Belongs to the EamA transporter family.

555079:TOCE RS04740
gene id: 555079:TOCE_RS04740
uniprot id: D9S2T7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 28 family. MurG subfamily.
messages: Cell membrane
messages: Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS04515
gene id: 555079:TOCE_RS04515
uniprot id: D9S2P1
names: Function
names: Similarity
messages: Belongs to the HrcA family.
messages: Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons.

555079:TOCE RS03295
gene id: 555079:TOCE_RS03295
uniprot id: D9S1Z9
names: Similarity
names: Subunit
messages: Belongs to the PdxA family. PdxA2 subfamily.
messages: Homodimer.

555079:TOCE RS10055
gene id: 555079:TOCE_RS10055
uniprot id: D9RZU6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CpxP/Spy family.
messages: Periplasm

555079:TOCE RS06925
gene id: 555079:TOCE_RS06925
uniprot id: D9RXR8
names: Similarity
messages: Belongs to the SleB family.

555079:TOCE RS04560
gene id: 555079:TOCE_RS04560
uniprot id: D9S2Q0
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS21 family.

555079:TOCE RS08800
gene id: 555079:TOCE_RS08800
uniprot id: D9RYR5
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS10525
gene id: 555079:TOCE_RS10525
uniprot id: D9S0F2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: Cell membrane
messages: Homohexamer.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the central section; belongs to the AAA ATPase family.

555079:TOCE RS01100
gene id: 555079:TOCE_RS01100
uniprot id: D9S070
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the D-alanine--D-alanine ligase family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Cell wall formation.
messages: Cytoplasm

555079:TOCE RS01430
gene id: 555079:TOCE_RS01430
uniprot id: D9S0D0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the MoaC family.
messages: Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).
messages: Homohexamer; trimer of dimers.

555079:TOCE RS01865
gene id: 555079:TOCE_RS01865
uniprot id: D9S0Y0
names: Similarity
messages: Belongs to the arginase family.

555079:TOCE RS07300
gene id: 555079:TOCE_RS07300
uniprot id: D9RXX9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS07685
gene id: 555079:TOCE_RS07685
uniprot id: D9RY49
names: Similarity
messages: Belongs to the peptidase S41A family.

555079:TOCE RS02260
gene id: 555079:TOCE_RS02260
uniprot id: D9S1E4
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fluoride channel Fluc/FEX (TC 1.A.43) family.
messages: Cell membrane
messages: Fluoride-specific ion channel. Important for reducing fluoride concentration in the cell, thus reducing its toxicity.
messages: Membrane
messages: Na(+) is not transported, but it plays an essential structural role and its presence is essential for fluoride channel function.

555079:TOCE RS07535
gene id: 555079:TOCE_RS07535
uniprot id: D9RY23
names: Domain
names: Similarity
messages: Belongs to the PurH family.
messages: The IMP cyclohydrolase activity resides in the N-terminal region.

555079:TOCE RS09985
gene id: 555079:TOCE_RS09985
uniprot id: D9RZT2
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MobA family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.
messages: Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.

555079:TOCE RS07540
gene id: 555079:TOCE_RS07540
uniprot id: D9RY24
names: Caution
names: Function
names: Similarity
messages: Belongs to the GART family.
messages: Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS10710
gene id: 555079:TOCE_RS10710
uniprot id: D9S0I2
names: Similarity
messages: Belongs to the CtsR family.

555079:TOCE RS03705
gene id: 555079:TOCE_RS03705
uniprot id: D9S282
names: Similarity
messages: Belongs to the transpeptidase family.

555079:TOCE RS02620
gene id: 555079:TOCE_RS02620
uniprot id: D9S1L7
names: Similarity
messages: Belongs to the peptidase S58 family.

555079:TOCE RS01590
gene id: 555079:TOCE_RS01590
uniprot id: D9S0S5
names: Domain
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the CobB/CbiA family.
messages: Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source.
messages: Comprises of two domains. The C-terminal domain contains the binding site for glutamine and catalyzes the hydrolysis of this substrate to glutamate and ammonia. The N-terminal domain is anticipated to bind ATP and cobyrinate and catalyzes the ultimate synthesis of the diamide product. The ammonia produced via the glutaminase domain is probably translocated to the adjacent domain via a molecular tunnel, where it reacts with an activated intermediate.
messages: The a and c carboxylates of cobyrinate are activated for nucleophilic attack via formation of a phosphorylated intermediate by ATP. CbiA catalyzes first the amidation of the c-carboxylate, and then that of the a-carboxylate.

555079:TOCE RS07815
gene id: 555079:TOCE_RS07815
uniprot id: D9RY74
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
messages: Could methylate the ribose at the nucleotide 34 wobble position in tRNA.
messages: Cytoplasm

555079:TOCE RS04335
gene id: 555079:TOCE_RS04335
uniprot id: D9S2K5
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by ADP and other diphosphonucleosides, and allosterically inhibited by phosphoenolpyruvate.
messages: Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Prokaryotic clade 'B1' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS04750
gene id: 555079:TOCE_RS04750
uniprot id: D9S2T9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EPSP synthase family. MurA subfamily.
messages: Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS10970
gene id: 555079:TOCE_RS10970
uniprot id: D9S0M7
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS04520
gene id: 555079:TOCE_RS04520
uniprot id: D9S2P2
names: Similarity
messages: Belongs to the TCP-1 chaperonin family.

555079:TOCE RS01600
gene id: 555079:TOCE_RS01600
uniprot id: D9S0S7
names: Similarity
messages: Belongs to the CobH/CbiC family.

555079:TOCE RS00735
gene id: 555079:TOCE_RS00735
uniprot id: D9RZN6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

555079:TOCE RS09000
gene id: 555079:TOCE_RS09000
uniprot id: D9RYU8
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS05660
gene id: 555079:TOCE_RS05660
uniprot id: D9S3C1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.
messages: Homodimer.
messages: Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.

555079:TOCE RS04715
gene id: 555079:TOCE_RS04715
uniprot id: D9S2T2
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family. MurE subfamily.
messages: Carboxylation is probably crucial for Mg(2+) binding and, consequently, for the gamma-phosphate positioning of ATP.
messages: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS06990
gene id: 555079:TOCE_RS06990
uniprot id: D9RXS5
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Nucleus

555079:TOCE RS03615
gene id: 555079:TOCE_RS03615
uniprot id: D9S262
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

555079:TOCE RS05920
gene id: 555079:TOCE_RS05920
uniprot id: D9S3G8
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IPP transferase family.
messages: Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

555079:TOCE RS02440
gene id: 555079:TOCE_RS02440
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS05750
gene id: 555079:TOCE_RS05750
uniprot id: D9S3D9
names: Domain
names: Similarity
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.

555079:TOCE RS03690
gene id: 555079:TOCE_RS03690
uniprot id: D9S279
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cytoplasm
messages: Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.
messages: Forms polymers.

555079:TOCE RS05500
gene id: 555079:TOCE_RS05500
uniprot id: D9S388
names: Similarity
messages: Belongs to the flagella basal body rod proteins family.

555079:TOCE RS07030
gene id: 555079:TOCE_RS07030
uniprot id: D9RXT3
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

555079:TOCE RS03505
gene id: 555079:TOCE_RS03505
uniprot id: D9S240
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

555079:TOCE RS06790
gene id: 555079:TOCE_RS06790
uniprot id: D9RXP0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS06565
gene id: 555079:TOCE_RS06565
uniprot id: D9S3U2
names: Similarity
messages: Belongs to the asp23 family.

555079:TOCE RS05390
gene id: 555079:TOCE_RS05390
uniprot id: D9S366
names: Similarity
messages: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily.

555079:TOCE RS05975
gene id: 555079:TOCE_RS05975
uniprot id: D9S3H9
names: Similarity
messages: Belongs to the SIMIBI class G3E GTPase family. ArgK/MeaB subfamily.

555079:TOCE RS03645
gene id: 555079:TOCE_RS03645
uniprot id: D9S270
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

555079:TOCE RS06560
gene id: 555079:TOCE_RS06560
uniprot id: D9S3U1
names: Similarity
messages: Belongs to the asp23 family.

555079:TOCE RS07175
gene id: 555079:TOCE_RS07175
uniprot id: D9RXV4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

555079:TOCE RS00720
gene id: 555079:TOCE_RS00720
uniprot id: D9RZN3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Monomer.
messages: Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.

555079:TOCE RS00910
gene id: 555079:TOCE_RS00910
uniprot id: D9S035
names: Similarity
messages: Belongs to the HypE family.

555079:TOCE RS03310
gene id: 555079:TOCE_RS03310
uniprot id: D9S202
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatB/GatE family. GatB subfamily.
messages: Heterotrimer of A, B and C subunits.

555079:TOCE RS07265
gene id: 555079:TOCE_RS07265
uniprot id: D9RXX3
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10995
gene id: 555079:TOCE_RS10995
uniprot id: D9S0N1
names: Similarity
messages: Belongs to the peptidase S49 family.

555079:TOCE RS10565
gene id: 555079:TOCE_RS10565
uniprot id: D9S0F7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

555079:TOCE RS00580
gene id: 555079:TOCE_RS00580
uniprot id: D9RZK5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

555079:TOCE RS07720
gene id: 555079:TOCE_RS07720
uniprot id: D9RY56
names: Similarity
messages: Belongs to the MtrH family.

555079:TOCE RS07520
gene id: 555079:TOCE_RS07520
uniprot id: D9RY20
names: Similarity
messages: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.

555079:TOCE RS10730
gene id: 555079:TOCE_RS10730
uniprot id: D9S0I6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
messages: Membrane

555079:TOCE RS08410
gene id: 555079:TOCE_RS08410
uniprot id: D9RYI9
names: Similarity
messages: Belongs to the proline racemase family.

555079:TOCE RS08100
gene id: 555079:TOCE_RS08100
uniprot id: D9RYD1
names: Subcellular Location Annotation
messages: Cytoplasm

555079:TOCE RS10275
gene id: 555079:TOCE_RS10275
uniprot id: D9RZY7
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS05125
gene id: 555079:TOCE_RS05125
uniprot id: D9S314
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
messages: Cytoplasm
messages: Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.

555079:TOCE RS02845
gene id: 555079:TOCE_RS02845
uniprot id: D9S1Q8
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

555079:TOCE RS06535
gene id: 555079:TOCE_RS06535
uniprot id: D9S3T6
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

555079:TOCE RS02595
gene id: 555079:TOCE_RS02595
uniprot id: D9S1L1
names: Similarity
messages: Belongs to the dGTPase family. Type 2 subfamily.

555079:TOCE RS06340
gene id: 555079:TOCE_RS06340
uniprot id: D9S3P9
names: Function
names: Similarity
messages: Belongs to the peptidase S11 family.
messages: Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.

555079:TOCE RS00325
gene id: 555079:TOCE_RS00325
uniprot id: D9RZF9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-3 integral membrane protein family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS05080
gene id: 555079:TOCE_RS05080
uniprot id: D9S305
names: Similarity
messages: Belongs to the YicC/YloC family.

555079:TOCE RS01830
gene id: 555079:TOCE_RS01830
uniprot id: D9S0X2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell membrane
messages: Membrane
messages: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.

555079:TOCE RS10180
gene id: 555079:TOCE_RS10180
uniprot id: D9RZX1
names: Cofactor
names: Miscellaneous
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: The active site is a redox-active disulfide bond.

555079:TOCE RS05410
gene id: 555079:TOCE_RS05410
uniprot id: D9S370
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MnmG family. TrmFO subfamily.
messages: Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs.
messages: Cytoplasm

555079:TOCE RS04780
gene id: 555079:TOCE_RS04780
uniprot id: D9S2U5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase U4 family.
messages: Cell membrane
messages: Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.

555079:TOCE RS03070
gene id: 555079:TOCE_RS03070
uniprot id: D9S1V3
names: Similarity
messages: Belongs to the methyltransferase superfamily. Arsenite methyltransferase family.

555079:TOCE RS00120
gene id: 555079:TOCE_RS00120
uniprot id: D9RZC2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmI family.
messages: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
messages: Cytoplasm

555079:TOCE RS06545
gene id: 555079:TOCE_RS06545
uniprot id: D9S3T8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseA family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

555079:TOCE RS01965
gene id: 555079:TOCE_RS01965
uniprot id: D9S100
names: Similarity
messages: Belongs to the AOR/FOR family.

555079:TOCE RS07210
gene id: 555079:TOCE_RS07210
uniprot id: D9RXW1
names: Function
names: Subunit
messages: Heterodimer of an alpha and a beta chain.
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).

555079:TOCE RS03510
gene id: 555079:TOCE_RS03510
uniprot id: D9S241
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrB/RnfD family.
messages: Cell membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

555079:TOCE RS10470
gene id: 555079:TOCE_RS10470
uniprot id: D9S0E1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A monovalent cation. Ammonium or potassium.
messages: Belongs to the type III pantothenate kinase family.
messages: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS05130
gene id: 555079:TOCE_RS05130
uniprot id: D9S315
names: Caution
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the radical SAM superfamily. RlmN family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.
messages: Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.

555079:TOCE RS02705
gene id: 555079:TOCE_RS02705
uniprot id: D9S1N3
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.

555079:TOCE RS06255
gene id: 555079:TOCE_RS06255
uniprot id: D9S3N2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the UPP synthase family.
messages: Binds 2 magnesium ions per subunit.
messages: Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
messages: Homodimer.

555079:TOCE RS10335
gene id: 555079:TOCE_RS10335
uniprot id: D9RZZ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptide transporter carbon starvation (CstA) (TC 2.A.114) family.
messages: Membrane

555079:TOCE RS03205
gene id: 555079:TOCE_RS03205
uniprot id: D9S1X8
names: Similarity
messages: Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.

555079:TOCE RS00860
gene id: 555079:TOCE_RS00860
uniprot id: D9S028
names: Similarity
messages: Belongs to the glycosyl hydrolase 26 family.

555079:TOCE RS06820
gene id: 555079:TOCE_RS06820
uniprot id: D9RXP6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS05915
gene id: 555079:TOCE_RS05915
uniprot id: D9S3G7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Hfq family.
messages: Homohexamer.
messages: RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.

555079:TOCE RS04245
gene id: 555079:TOCE_RS04245
uniprot id: D9S2I6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurB family.
messages: Cell wall formation.
messages: Cytoplasm

555079:TOCE RS09700
gene id: 555079:TOCE_RS09700
uniprot id: D9RZA3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS08610
gene id: 555079:TOCE_RS08610
uniprot id: D9RYM7
names: Similarity
messages: Belongs to the FldB/FldC dehydratase alpha/beta subunit family.

555079:TOCE RS05370
gene id: 555079:TOCE_RS05370
uniprot id: D9S362
names: Similarity
messages: Belongs to the methylamine corrinoid protein family.

555079:TOCE RS08545
gene id: 555079:TOCE_RS08545
uniprot id: D9RYL6
names: Function
names: Similarity
messages: Belongs to the glycosyltransferase 26 family. TagA/TarA subfamily.
messages: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.

555079:TOCE RS07420
gene id: 555079:TOCE_RS07420
uniprot id: D9RY00
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the urocanase family.
messages: Binds 1 NAD(+) per subunit.
messages: Catalyzes the conversion of urocanate to 4-imidazolone-5-propionate.
messages: Cytoplasm

555079:TOCE RS03860
gene id: 555079:TOCE_RS03860
uniprot id: D9S2B3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SelA family.
messages: Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
messages: Cytoplasm

555079:TOCE RS03355
gene id: 555079:TOCE_RS03355
uniprot id: D9S211
names: Similarity
messages: Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.

555079:TOCE RS07545
gene id: 555079:TOCE_RS07545
uniprot id: D9RY25
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AIR synthase family.
messages: Cytoplasm

555079:TOCE RS08660
gene id: 555079:TOCE_RS08660
uniprot id: D9RYN7
names: Function
names: Similarity
messages: Belongs to the V-ATPase D subunit family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

555079:TOCE RS02375
gene id: 555079:TOCE_RS02375
uniprot id: D9S1G9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Membrane

555079:TOCE RS11365
gene id: 555079:TOCE_RS11365
uniprot id: D9S182
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL9 family.
messages: Binds to the 23S rRNA.

555079:TOCE RS08135
gene id: 555079:TOCE_RS08135
uniprot id: D9RYD8
names: Similarity
messages: Belongs to the thioredoxin family.

555079:TOCE RS09065
gene id: 555079:TOCE_RS09065
uniprot id: D9RYV6
names: Function
names: Similarity
messages: Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.
messages: Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).

555079:TOCE RS07960
gene id: 555079:TOCE_RS07960
uniprot id: D9RYA2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the bacterial flagellin family.
messages: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
messages: Secreted

555079:TOCE RS05175
gene id: 555079:TOCE_RS05175
uniprot id: D9S324
names: Function
names: Similarity
messages: Belongs to the alpha/beta-type SASP family.
messages: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to UV light.

555079:TOCE RS08240
gene id: 555079:TOCE_RS08240
uniprot id: D9RYF8
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS00285
gene id: 555079:TOCE_RS00285
uniprot id: D9RZF3
names: Similarity
messages: Belongs to the mannitol dehydrogenase family.

555079:TOCE RS07995
gene id: 555079:TOCE_RS07995
uniprot id: D9RYA9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

555079:TOCE RS00680
gene id: 555079:TOCE_RS00680
uniprot id: D9RZM5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

555079:TOCE RS06850
gene id: 555079:TOCE_RS06850
uniprot id: D9RXQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecD/SecF family. SecD subfamily.
messages: Cell membrane
messages: Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.
messages: Membrane
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.

555079:TOCE RS08015
gene id: 555079:TOCE_RS08015
uniprot id: D9RYB3
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the flagella basal body rod proteins family.
messages: Secreted

555079:TOCE RS00425
gene id: 555079:TOCE_RS00425
uniprot id: D9RZH6
names: Similarity
messages: Belongs to the sulfur carrier protein TusA family.

555079:TOCE RS02980
gene id: 555079:TOCE_RS02980
uniprot id: D9S1T5
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS00350
gene id: 555079:TOCE_RS00350
uniprot id: D9RZG4
names: Function
names: Similarity
messages: Belongs to the CRISPR-associated protein Cas6/Cse3/CasE family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).

555079:TOCE RS00600
gene id: 555079:TOCE_RS00600
uniprot id: D9RZK9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
messages: Cytoplasm

555079:TOCE RS06615
gene id: 555079:TOCE_RS06615
uniprot id: D9RXK5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the elongation factor P family.
messages: Cytoplasm
messages: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.

555079:TOCE RS05475
gene id: 555079:TOCE_RS05475
uniprot id: D9S383
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliJ family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS08380
gene id: 555079:TOCE_RS08380
uniprot id: D9RYI3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrB family.
messages: Cytoplasm
messages: Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.
messages: The beta-hairpin motif is involved in DNA binding.

555079:TOCE RS05115
gene id: 555079:TOCE_RS05115
uniprot id: D9S312
names: Function
names: Similarity
messages: Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.
messages: Belongs to the Fmt family.

555079:TOCE RS04525
gene id: 555079:TOCE_RS04525
uniprot id: D9S2P3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GrpE family.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.

555079:TOCE RS11400
gene id: 555079:TOCE_RS11400
uniprot id: D9S189
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Membrane

555079:TOCE RS05265
gene id: 555079:TOCE_RS05265
uniprot id: D9S342
names: Function
names: Similarity
names: Subunit
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.
messages: Homotetramer.

555079:TOCE RS01415
gene id: 555079:TOCE_RS01415
uniprot id: D9S0C7
names: Function
names: Similarity
messages: Belongs to the MoeA family.
messages: Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP.
messages: May be involved in the biosynthesis of molybdopterin.

555079:TOCE RS00375
gene id: 555079:TOCE_RS00375
uniprot id: D9RZG7
names: Similarity
messages: In the N-terminal section; belongs to the CRISPR-associated nuclease Cas3-HD family.
messages: In the central section; belongs to the CRISPR-associated helicase Cas3 family.

555079:TOCE RS02995
gene id: 555079:TOCE_RS02995
uniprot id: D9S1T8
names: Function
names: Similarity
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

555079:TOCE RS00540
gene id: 555079:TOCE_RS00540
uniprot id: D9RZJ7
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

555079:TOCE RS09325
gene id: 555079:TOCE_RS09325
uniprot id: D9RZ26
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enolase family.
messages: Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
messages: Cell surface
messages: Cytoplasm
messages: Secreted
messages: The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.

555079:TOCE RS06875
gene id: 555079:TOCE_RS06875
uniprot id: D9RXQ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the QueA family.
messages: Cytoplasm
messages: Monomer.
messages: Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).

555079:TOCE RS09705
gene id: 555079:TOCE_RS09705
uniprot id: D9RZA4
names: Similarity
messages: Belongs to the GSP E family.

555079:TOCE RS10465
gene id: 555079:TOCE_RS10465
uniprot id: D9S0E0
names: Function
names: Similarity
messages: Belongs to the dus family.
messages: Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines.

555079:TOCE RS09435
gene id: 555079:TOCE_RS09435
uniprot id: D9RZ48
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS09980
gene id: 555079:TOCE_RS09980
uniprot id: D9RZT1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM61 family.
messages: Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
messages: Homotetramer composed of a dimer of dimers.

555079:TOCE RS01935
gene id: 555079:TOCE_RS01935
uniprot id: D9S0Z4
names: Caution
names: Similarity
messages: Belongs to the acetaldehyde dehydrogenase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS06695
gene id: 555079:TOCE_RS06695
uniprot id: D9RXM1
names: Function
names: Similarity
messages: Belongs to the transglycosylase MltG family.
messages: Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.

555079:TOCE RS01605
gene id: 555079:TOCE_RS01605
uniprot id: D9S0S8
names: Function
names: Similarity
messages: Belongs to the CbiD family.
messages: Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.

555079:TOCE RS01545
gene id: 555079:TOCE_RS01545
uniprot id: D9S0R6
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS07285
gene id: 555079:TOCE_RS07285
uniprot id: D9RXX6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrC family.
messages: Cytoplasm
messages: Interacts with UvrB in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.

555079:TOCE RS02370
gene id: 555079:TOCE_RS02370
uniprot id: D9S1G8
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10955
gene id: 555079:TOCE_RS10955
uniprot id: D9S0M4
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

555079:TOCE RS09025
gene id: 555079:TOCE_RS09025
uniprot id: D9RYV0
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

555079:TOCE RS09640
gene id: 555079:TOCE_RS09640
uniprot id: D9RZ91
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NnrD/CARKD family.
messages: Belongs to the NnrE/AIBP family.
messages: Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.
messages: Binds 1 potassium ion per subunit.
messages: Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.
messages: Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
messages: Homotetramer.
messages: In the C-terminal section; belongs to the NnrD/CARKD family.
messages: In the N-terminal section; belongs to the NnrE/AIBP family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS07600
gene id: 555079:TOCE_RS07600
uniprot id: D9RY34
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

555079:TOCE RS09600
gene id: 555079:TOCE_RS09600
uniprot id: D9RZ83
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS05275
gene id: 555079:TOCE_RS05275
uniprot id: D9S344
names: Function
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.

555079:TOCE RS10815
gene id: 555079:TOCE_RS10815
uniprot id: D9S0K3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaX/STICHEL family.
messages: DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.

555079:TOCE RS07650
gene id: 555079:TOCE_RS07650
uniprot id: D9RY42
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

555079:TOCE RS03630
gene id: 555079:TOCE_RS03630
uniprot id: D9S265
names: Similarity
messages: Belongs to the manganese catalase family.

555079:TOCE RS08400
gene id: 555079:TOCE_RS08400
uniprot id: D9RYI7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS10725
gene id: 555079:TOCE_RS10725
uniprot id: D9S0I5
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IMPDH/GMPR family.
messages: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH.

555079:TOCE RS10740
gene id: 555079:TOCE_RS10740
uniprot id: D9S0I8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GDT1 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

555079:TOCE RS01445
gene id: 555079:TOCE_RS01445
uniprot id: D9S0D3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

555079:TOCE RS05330
gene id: 555079:TOCE_RS05330
uniprot id: D9S355
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

555079:TOCE RS06715
gene id: 555079:TOCE_RS06715
uniprot id: D9RXM5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS00770
gene id: 555079:TOCE_RS00770
uniprot id: D9RZP3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex.
messages: Belongs to the ABC transporter superfamily. Energy-coupling factor EcfA family.
messages: Cell membrane
messages: Forms a stable energy-coupling factor (ECF) transporter complex composed of 2 membrane-embedded substrate-binding proteins (S component), 2 ATP-binding proteins (A component) and 2 transmembrane proteins (T component).
messages: Membrane

555079:TOCE RS09085
gene id: 555079:TOCE_RS09085
uniprot id: D9RYW0
names: Similarity
names: Subunit
messages: Belongs to the serine/threonine dehydratase family.
messages: In the native structure, TdcB is in a dimeric form, whereas in the TdcB-AMP complex, it exists in a tetrameric form (dimer of dimers).

555079:TOCE RS11130
gene id: 555079:TOCE_RS11130
uniprot id: D9S139
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PdxS/SNZ family.
messages: Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively.
messages: In the presence of PdxT, forms a dodecamer of heterodimers.

555079:TOCE RS03640
gene id: 555079:TOCE_RS03640
uniprot id: D9S269
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS07555
gene id: 555079:TOCE_RS07555
uniprot id: D9RY27
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FGAMS family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer. Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.
messages: Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.

555079:TOCE RS02770
gene id: 555079:TOCE_RS02770
uniprot id: D9S1P3
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

555079:TOCE RS10535
gene id: 555079:TOCE_RS10535
uniprot id: D9S0F4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tRNA(Ile)-lysidine synthase family.
messages: Cytoplasm
messages: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
messages: The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding.

555079:TOCE RS05420
gene id: 555079:TOCE_RS05420
uniprot id: D9S372
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: Allosterically activated by HslU binding.
messages: Belongs to the peptidase T1B family. HslV subfamily.
messages: Cytoplasm
messages: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.

555079:TOCE RS08905
gene id: 555079:TOCE_RS08905
uniprot id: D9RYS9
names: Cofactor
messages: Binds 2 magnesium ions per subunit.

555079:TOCE RS00470
gene id: 555079:TOCE_RS00470
uniprot id: D9RZI5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS07915
gene id: 555079:TOCE_RS07915
uniprot id: D9RY94
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

555079:TOCE RS08265
gene id: 555079:TOCE_RS08265
uniprot id: D9RYG3
names: Similarity
messages: Belongs to the NadC/ModD family.

555079:TOCE RS10040
gene id: 555079:TOCE_RS10040
uniprot id: D9RZU3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
messages: Cell membrane
messages: Mediates zinc uptake. May also transport other divalent cations.
messages: Membrane

555079:TOCE RS05305
gene id: 555079:TOCE_RS05305
uniprot id: D9S350
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY.
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.

555079:TOCE RS09885
gene id: 555079:TOCE_RS09885
uniprot id: D9RZR2
names: Cofactor
names: Function
names: PTM
names: Similarity
messages: Activated by phosphorylation.
messages: Belongs to the phosphohexose mutase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.

555079:TOCE RS04635
gene id: 555079:TOCE_RS04635
uniprot id: D9S2R5
names: Similarity
messages: Belongs to the dGTPase family. Type 2 subfamily.

555079:TOCE RS00655
gene id: 555079:TOCE_RS00655
uniprot id: D9RZM0
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

555079:TOCE RS00610
gene id: 555079:TOCE_RS00610
uniprot id: D9RZL1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

555079:TOCE RS01045
gene id: 555079:TOCE_RS01045
uniprot id: D9S059
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS00675
gene id: 555079:TOCE_RS00675
uniprot id: D9RZM4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

555079:TOCE RS05055
gene id: 555079:TOCE_RS05055
uniprot id: D9S300
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

555079:TOCE RS00660
gene id: 555079:TOCE_RS00660
uniprot id: D9RZM1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS17 family.
messages: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
messages: Part of the 30S ribosomal subunit.

555079:TOCE RS07530
gene id: 555079:TOCE_RS07530
uniprot id: D9RY22
names: Similarity
messages: Belongs to the GARS family.

555079:TOCE RS00250
gene id: 555079:TOCE_RS00250
uniprot id: D9RZE8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homohexamer.
messages: Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P).

555079:TOCE RS01315
gene id: 555079:TOCE_RS01315
uniprot id: D9S0B1
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS11005
gene id: 555079:TOCE_RS11005
uniprot id: D9S0N3
names: Similarity
messages: Belongs to the peptidase S16 family.

555079:TOCE RS11275
gene id: 555079:TOCE_RS11275
uniprot id: D9S168
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS00590
gene id: 555079:TOCE_RS00590
uniprot id: D9RZK7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

555079:TOCE RS07005
gene id: 555079:TOCE_RS07005
uniprot id: D9RXS8
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

555079:TOCE RS10245
gene id: 555079:TOCE_RS10245
uniprot id: D9RZY1
names: Function
names: Similarity
messages: Belongs to the V-ATPase D subunit family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

555079:TOCE RS01855
gene id: 555079:TOCE_RS01855
uniprot id: D9S0X7
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the FBP aldolase/phosphatase family.
messages: Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
messages: Consists of a single catalytic domain, but remodels its active-site architecture via a large structural change to exhibit dual activities.
messages: Homooctamer; dimer of tetramers.

555079:TOCE RS09105
gene id: 555079:TOCE_RS09105
uniprot id: D9RYW4
names: Similarity
messages: Belongs to the CdaR family.

555079:TOCE RS09020
gene id: 555079:TOCE_RS09020
uniprot id: D9RYU9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AB hydrolase superfamily. MetX family.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.

555079:TOCE RS01420
gene id: 555079:TOCE_RS01420
uniprot id: D9S0C8
names: Function
names: Similarity
messages: Belongs to the MoeA family.
messages: Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP.
messages: May be involved in the biosynthesis of molybdopterin.

555079:TOCE RS06860
gene id: 555079:TOCE_RS06860
uniprot id: D9RXQ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YajC family.
messages: Membrane

555079:TOCE RS08865
gene id: 555079:TOCE_RS08865
uniprot id: D9RYS8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family. Tig subfamily.
messages: Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.
messages: Cytoplasm
messages: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase.

555079:TOCE RS05090
gene id: 555079:TOCE_RS05090
uniprot id: D9S307
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the guanylate kinase family.
messages: Cytoplasm
messages: Essential for recycling GMP and indirectly, cGMP.

555079:TOCE RS05215
gene id: 555079:TOCE_RS05215
uniprot id: D9S332
names: Similarity
messages: Belongs to the phosphate acetyltransferase and butyryltransferase family.

555079:TOCE RS05270
gene id: 555079:TOCE_RS05270
uniprot id: D9S343
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

555079:TOCE RS10750
gene id: 555079:TOCE_RS10750
uniprot id: D9S0J0
names: Cofactor
names: Similarity
messages: Belongs to the Fur family.
messages: Binds 1 Mn(2+) or Fe(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.

555079:TOCE RS07570
gene id: 555079:TOCE_RS07570
uniprot id: D9RY30
names: Similarity
messages: Belongs to the SAICAR synthetase family.

555079:TOCE RS06785
gene id: 555079:TOCE_RS06785
uniprot id: D9RXN9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
messages: Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS04350
gene id: 555079:TOCE_RS04350
uniprot id: D9S2K8
names: Function
names: Similarity
messages: Acts on leucine, isoleucine and valine.
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.

555079:TOCE RS06965
gene id: 555079:TOCE_RS06965
uniprot id: D9RXS0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
messages: Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS08280
gene id: 555079:TOCE_RS08280
uniprot id: D9RYG6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DNA polymerase type-A family.
messages: In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
messages: Single-chain monomer with multiple functions.

555079:TOCE RS09895
gene id: 555079:TOCE_RS09895
uniprot id: D9RZR4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the adenylate cyclase family. DacA/CdaA subfamily.
messages: Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
messages: Probably a homodimer.

555079:TOCE RS02950
gene id: 555079:TOCE_RS02950
uniprot id: D9S1S9
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10270
gene id: 555079:TOCE_RS10270
uniprot id: D9RZY6
names: Function
names: Similarity
messages: Belongs to the V-ATPase E subunit family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

555079:TOCE RS05450
gene id: 555079:TOCE_RS05450
uniprot id: D9S378
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliE family.

555079:TOCE RS11390
gene id: 555079:TOCE_RS11390
uniprot id: D9S187
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with bS18 to 16S ribosomal RNA.

555079:TOCE RS03225
gene id: 555079:TOCE_RS03225
uniprot id: D9S1Y2
names: Similarity
messages: Belongs to the pseudouridine synthase RsuA family.

555079:TOCE RS01845
gene id: 555079:TOCE_RS01845
uniprot id: D9S0X5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the chorismate synthase family.
messages: Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
messages: Homotetramer.
messages: Reduced FMN (FMNH(2)).

555079:TOCE RS02665
gene id: 555079:TOCE_RS02665
uniprot id: D9S1M6
names: Function
names: Similarity
messages: Belongs to the CRISPR-associated Csm5 family.
messages: This subunit might be involved in maturation of a crRNA intermediate to its mature form.

555079:TOCE RS04790
gene id: 555079:TOCE_RS04790
uniprot id: D9S2U7
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

555079:TOCE RS00630
gene id: 555079:TOCE_RS00630
uniprot id: D9RZL5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

555079:TOCE RS08975
gene id: 555079:TOCE_RS08975
uniprot id: D9RYU3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase PH family.
messages: Homohexameric ring arranged as a trimer of dimers.
messages: Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.

555079:TOCE RS09445
gene id: 555079:TOCE_RS09445
uniprot id: D9RZ50
names: Function
names: Similarity
messages: Belongs to the FGGY kinase family.
messages: Catalyzes the phosphorylation of D-xylulose to D-xylulose 5-phosphate.

555079:TOCE RS10100
gene id: 555079:TOCE_RS10100
uniprot id: D9RZV5
names: Similarity
messages: Belongs to the flagella basal body rod proteins family.

555079:TOCE RS01500
gene id: 555079:TOCE_RS01500
uniprot id: D9S0Q8
names: Function
names: Similarity
messages: Belongs to the alanine racemase family.
messages: Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.

555079:TOCE RS00685
gene id: 555079:TOCE_RS00685
uniprot id: D9RZM6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

555079:TOCE RS10930
gene id: 555079:TOCE_RS10930
uniprot id: D9S0L9
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

555079:TOCE RS11405
gene id: 555079:TOCE_RS11405
uniprot id: D9S190
names: Similarity
messages: Belongs to the sulfur carrier protein TusA family.

555079:TOCE RS04065
gene id: 555079:TOCE_RS04065
uniprot id: D9S2F0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

555079:TOCE RS02505
gene id: 555079:TOCE_RS02505
uniprot id: D9S1J3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial sugar transferase family.
messages: Membrane

555079:TOCE RS00595
gene id: 555079:TOCE_RS00595
uniprot id: D9RZK8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

555079:TOCE RS05600
gene id: 555079:TOCE_RS05600
uniprot id: D9S3A8
names: Function
names: Similarity
messages: Belongs to the CheD family.
messages: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.

555079:TOCE RS11110
gene id: 555079:TOCE_RS11110
uniprot id: D9S135
names: Similarity
messages: Belongs to the GerABKC lipoprotein family.

555079:TOCE RS01585
gene id: 555079:TOCE_RS01585
uniprot id: D9S0S4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell membrane
messages: Membrane
messages: Part of an ABC transporter complex. Responsible for energy coupling to the transport system.

555079:TOCE RS11300
gene id: 555079:TOCE_RS11300
uniprot id: D9S173
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0756 family.
messages: Cell membrane

555079:TOCE RS03695
gene id: 555079:TOCE_RS03695
uniprot id: D9S280
names: Function
names: Similarity
messages: Belongs to the MreC family.
messages: Involved in formation and maintenance of cell shape.

555079:TOCE RS09235
gene id: 555079:TOCE_RS09235
uniprot id: D9RZ09
names: Similarity
messages: Belongs to the methylmalonyl-CoA epimerase family.

555079:TOCE RS04815
gene id: 555079:TOCE_RS04815
uniprot id: D9S2V2
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS11495
gene id: 555079:TOCE_RS11495
uniprot id: D9S1A8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
messages: Cytoplasm
messages: Specifically methylates the N7 position of a guanine in 16S rRNA.

555079:TOCE RS10665
gene id: 555079:TOCE_RS10665
uniprot id: D9S0H3
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IspF family.
messages: Binds 1 divalent metal cation per subunit.
messages: Homotrimer.
messages: Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS09400
gene id: 555079:TOCE_RS09400
uniprot id: D9RZ41
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10295
gene id: 555079:TOCE_RS10295
uniprot id: D9RZZ0
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS05855
gene id: 555079:TOCE_RS05855
uniprot id: D9S3F5
names: Similarity
messages: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.

555079:TOCE RS06195
gene id: 555079:TOCE_RS06195
uniprot id: D9S3M0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RimP family.
messages: Cytoplasm
messages: Required for maturation of 30S ribosomal subunits.

555079:TOCE RS09195
gene id: 555079:TOCE_RS09195
uniprot id: D9RZ01
names: Similarity
messages: Belongs to the band 7/mec-2 family.

555079:TOCE RS10655
gene id: 555079:TOCE_RS10655
uniprot id: D9S0H1
names: Similarity
messages: Belongs to the transferase hexapeptide repeat family.

555079:TOCE RS10575
gene id: 555079:TOCE_RS10575
uniprot id: D9S0F9
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

555079:TOCE RS01815
gene id: 555079:TOCE_RS01815
uniprot id: D9S0W9
names: Similarity
messages: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.

555079:TOCE RS01425
gene id: 555079:TOCE_RS01425
uniprot id: D9S0C9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. MoaA family.
messages: Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.
messages: Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.
messages: Monomer and homodimer.

555079:TOCE RS02970
gene id: 555079:TOCE_RS02970
uniprot id: D9S1T3
names: Similarity
messages: Belongs to the BMP lipoprotein family.

555079:TOCE RS10255
gene id: 555079:TOCE_RS10255
uniprot id: D9RZY3
names: Function
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit.

555079:TOCE RS05325
gene id: 555079:TOCE_RS05325
uniprot id: D9S354
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase TrmD family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates guanosine-37 in various tRNAs.

555079:TOCE RS09730
gene id: 555079:TOCE_RS09730
uniprot id: D9RZA9
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS02660
gene id: 555079:TOCE_RS02660
uniprot id: D9S1M5
names: Similarity
messages: Belongs to the CRISPR-associated Csm4 family.

555079:TOCE RS01525
gene id: 555079:TOCE_RS01525
uniprot id: D9S0R3
names: Subcellular Location Annotation
messages: Cytoplasm

555079:TOCE RS01915
gene id: 555079:TOCE_RS01915
uniprot id: D9S0Z0
names: Function
names: Similarity
messages: Belongs to the RecD family. RecD-like subfamily.
messages: DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity.

555079:TOCE RS07255
gene id: 555079:TOCE_RS07255
uniprot id: D9RXX1
names: Similarity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.

555079:TOCE RS05155
gene id: 555079:TOCE_RS05155
uniprot id: D9S320
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

555079:TOCE RS09925
gene id: 555079:TOCE_RS09925
uniprot id: D9RZS0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0718 family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS11120
gene id: 555079:TOCE_RS11120
uniprot id: D9S137
names: Similarity
messages: Belongs to the GerABKA family.

555079:TOCE RS03565
gene id: 555079:TOCE_RS03565
uniprot id: D9S253
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

555079:TOCE RS10580
gene id: 555079:TOCE_RS10580
uniprot id: D9S0G0
names: Function
names: Similarity
messages: Belongs to the NusG family.
messages: Participates in transcription elongation, termination and antitermination.

555079:TOCE RS05385
gene id: 555079:TOCE_RS05385
uniprot id: D9S365
names: Similarity
messages: Belongs to the methylenetetrahydrofolate reductase family.

555079:TOCE RS06125
gene id: 555079:TOCE_RS06125
uniprot id: D9S3K6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
messages: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.
messages: Cytoplasm
messages: Homodimer, may be a subunit of the RNA degradosome.

555079:TOCE RS01825
gene id: 555079:TOCE_RS01825
uniprot id: D9S0X1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PstS family.
messages: Cell membrane
messages: Involved in the system for phosphate transport across the cytoplasmic membrane.
messages: Membrane
messages: Part of the ABC transporter complex PstSACB involved in phosphate import.
messages: The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS).

555079:TOCE RS06070
gene id: 555079:TOCE_RS06070
uniprot id: D9S3J8
names: Similarity
messages: Belongs to the CinA family.

555079:TOCE RS10745
gene id: 555079:TOCE_RS10745
uniprot id: D9S0I9
names: Function
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase class-2 family.
messages: Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.

555079:TOCE RS00760
gene id: 555079:TOCE_RS00760
uniprot id: D9RZP1
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL17 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L32.

555079:TOCE RS11135
gene id: 555079:TOCE_RS11135
uniprot id: D9S140
names: Similarity
messages: In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

555079:TOCE RS01275
gene id: 555079:TOCE_RS01275
uniprot id: D9S0A3
names: Similarity
messages: Belongs to the FldB/FldC dehydratase alpha/beta subunit family.

555079:TOCE RS07830
gene id: 555079:TOCE_RS07830
uniprot id: D9RY76
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10250
gene id: 555079:TOCE_RS10250
uniprot id: D9RZY2
names: Function
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.

555079:TOCE RS04150
gene id: 555079:TOCE_RS04150
uniprot id: D9S2G7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetokinase family.
messages: Cytoplasm

555079:TOCE RS03130
gene id: 555079:TOCE_RS03130
uniprot id: D9S1W4
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS07590
gene id: 555079:TOCE_RS07590
uniprot id: D9RY33
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS09120
gene id: 555079:TOCE_RS09120
uniprot id: D9RYW7
names: Cofactor
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.

555079:TOCE RS10670
gene id: 555079:TOCE_RS10670
uniprot id: D9S0H4
names: Function
names: Similarity
messages: Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
messages: Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).

555079:TOCE RS01435
gene id: 555079:TOCE_RS01435
uniprot id: D9S0D1
names: Function
messages: May be involved in the biosynthesis of molybdopterin.

555079:TOCE RS02330
gene id: 555079:TOCE_RS02330
uniprot id: D9S1G0
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS09690
gene id: 555079:TOCE_RS09690
uniprot id: D9RZA1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A24 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: Plays an essential role in type IV pili and type II pseudopili formation by proteolytically removing the leader sequence from substrate proteins and subsequently monomethylating the alpha-amino group of the newly exposed N-terminal phenylalanine.

555079:TOCE RS01800
gene id: 555079:TOCE_RS01800
uniprot id: D9S0W6
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS05525
gene id: 555079:TOCE_RS05525
uniprot id: D9S393
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliM family.
messages: Membrane

555079:TOCE RS04460
gene id: 555079:TOCE_RS04460
uniprot id: D9S2N0
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS08145
gene id: 555079:TOCE_RS08145
uniprot id: D9RYE0
names: Function
names: Similarity
messages: Antitoxin component of a type II toxin-antitoxin (TA) system.
messages: Belongs to the phD/YefM antitoxin family.

555079:TOCE RS05645
gene id: 555079:TOCE_RS05645
uniprot id: D9S3B8
names: Similarity
messages: In the N-terminal section; belongs to the NADH:flavin oxidoreductase/NADH oxidase family.

555079:TOCE RS10595
gene id: 555079:TOCE_RS10595
uniprot id: D9RZL0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

555079:TOCE RS05425
gene id: 555079:TOCE_RS05425
uniprot id: D9S373
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
messages: Belongs to the ClpX chaperone family. HslU subfamily.
messages: Cytoplasm

555079:TOCE RS11025
gene id: 555079:TOCE_RS11025
uniprot id: D9S0N8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Monomer.

555079:TOCE RS09180
gene id: 555079:TOCE_RS09180
uniprot id: D9RYZ8
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS05160
gene id: 555079:TOCE_RS05160
uniprot id: D9S321
names: Similarity
messages: Belongs to the asp23 family.

555079:TOCE RS00730
gene id: 555079:TOCE_RS00730
uniprot id: D9RZN5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

555079:TOCE RS00755
gene id: 555079:TOCE_RS00755
uniprot id: D9RZP0
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

555079:TOCE RS06155
gene id: 555079:TOCE_RS06155
uniprot id: D9S3L2
names: Similarity
messages: Belongs to the ribF family.

555079:TOCE RS06685
gene id: 555079:TOCE_RS06685
uniprot id: D9RXL9
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

555079:TOCE RS11065
gene id: 555079:TOCE_RS11065
uniprot id: D9S0P6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nlpA lipoprotein family.
messages: Membrane

555079:TOCE RS06485
gene id: 555079:TOCE_RS06485
uniprot id: D9S3S7
names: Function
names: Similarity
messages: Belongs to the 'phage' integrase family.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules.

555079:TOCE RS10095
gene id: 555079:TOCE_RS10095
uniprot id: D9RZV4
names: Similarity
names: Subunit
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

555079:TOCE RS05935
gene id: 555079:TOCE_RS05935
uniprot id: D9S3H1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the methylthiotransferase family. MiaB subfamily.
messages: Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
messages: Cytoplasm
messages: Monomer.

555079:TOCE RS10160
gene id: 555079:TOCE_RS10160
uniprot id: D9RZW7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Cell membrane
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Membrane

555079:TOCE RS08715
gene id: 555079:TOCE_RS08715
uniprot id: D9RYP8
names: Similarity
messages: Belongs to the carbon-nitrogen hydrolase superfamily. NIT1/NIT2 family.

555079:TOCE RS08685
gene id: 555079:TOCE_RS08685
uniprot id: D9RYP2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NADH dehydrogenase family.
messages: Membrane

555079:TOCE RS10640
gene id: 555079:TOCE_RS10640
uniprot id: D9S0G8
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the thymidylate synthase ThyX family.
messages: Binds 4 FAD per tetramer. Each FAD binding site is formed by three monomers.
messages: Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS00055
gene id: 555079:TOCE_RS00055
uniprot id: D9RYY0
names: Function
names: Similarity
messages: Belongs to the thymidylate kinase family.
messages: Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.

555079:TOCE RS06150
gene id: 555079:TOCE_RS06150
uniprot id: D9S3L1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

555079:TOCE RS04720
gene id: 555079:TOCE_RS04720
uniprot id: D9S2T3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family. MurF subfamily.
messages: Cytoplasm
messages: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.

555079:TOCE RS05490
gene id: 555079:TOCE_RS05490
uniprot id: D9S386
names: Similarity
messages: Belongs to the FlgD family.

555079:TOCE RS06060
gene id: 555079:TOCE_RS06060
uniprot id: D9S3J5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
messages: Cytoplasm

555079:TOCE RS06890
gene id: 555079:TOCE_RS06890
uniprot id: D9RXR1
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvB family.
messages: Cytoplasm
messages: Has 3 domains, the large (RuvB-L) and small ATPase (RuvB-S) domains and the C-terminal head (RuvB-H) domain. The head domain binds DNA, while the ATPase domains jointly bind ATP, ADP or are empty depending on the state of the subunit in the translocation cycle. During a single DNA translocation step the structure of each domain remains the same, but their relative positions change.
messages: Homohexamer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time. Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange. Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration. The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration. Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.

555079:TOCE RS03010
gene id: 555079:TOCE_RS03010
uniprot id: D9S1U1
names: Function
names: Similarity
messages: Belongs to the PNP/MTAP phosphorylase family.
messages: The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.

555079:TOCE RS00745
gene id: 555079:TOCE_RS00745
uniprot id: D9RZN8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

555079:TOCE RS00385
gene id: 555079:TOCE_RS00385
uniprot id: D9RZG9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endonuclease Cas1 family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas2 homodimer.

555079:TOCE RS10355
gene id: 555079:TOCE_RS10355
uniprot id: D9S000
names: Similarity
messages: Belongs to the UDP-N-acetylglucosamine 2-epimerase family.

555079:TOCE RS07680
gene id: 555079:TOCE_RS07680
uniprot id: D9RY48
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS00255
gene id: 555079:TOCE_RS00255
uniprot id: D9RZE9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.
messages: This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.

555079:TOCE RS06740
gene id: 555079:TOCE_RS06740
uniprot id: D9RXN0
names: Similarity
messages: Belongs to the UbiD family.

555079:TOCE RS06730
gene id: 555079:TOCE_RS06730
uniprot id: D9RXM8
names: Caution
names: Function
names: Similarity
messages: Belongs to the UbiX/PAD1 family.
messages: Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS05445
gene id: 555079:TOCE_RS05445
uniprot id: D9S377
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

555079:TOCE RS11080
gene id: 555079:TOCE_RS11080
uniprot id: D9S0P9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
messages: Membrane

555079:TOCE RS08640
gene id: 555079:TOCE_RS08640
uniprot id: D9RYN3
names: Similarity
messages: Belongs to the V-ATPase F subunit family.

555079:TOCE RS01390
gene id: 555079:TOCE_RS01390
uniprot id: D9S0C2
names: Function
names: Subcellular Location Annotation
messages: Membrane
messages: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.

555079:TOCE RS11530
gene id: 555079:TOCE_RS11530
uniprot id: D9S1B5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

555079:TOCE RS06910
gene id: 555079:TOCE_RS06910
uniprot id: D9RXR5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TACO1 family.
messages: Cytoplasm

555079:TOCE RS00615
gene id: 555079:TOCE_RS00615
uniprot id: D9RZL2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL3 family.
messages: One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.

555079:TOCE RS04875
gene id: 555079:TOCE_RS04875
uniprot id: D9S2W4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Cytoplasm

555079:TOCE RS10030
gene id: 555079:TOCE_RS10030
uniprot id: D9RZU1
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M38 family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Carboxylation allows a single lysine to coordinate two zinc ions.
messages: Catalyzes the hydrolytic cleavage of a subset of L-isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation.
messages: Cytoplasm

555079:TOCE RS09755
gene id: 555079:TOCE_RS09755
uniprot id: D9RZB3
names: Similarity
messages: Belongs to the HepT RNase toxin family.

555079:TOCE RS00240
gene id: 555079:TOCE_RS00240
uniprot id: D9RZE6
names: Function
names: Similarity
messages: Belongs to the SpoVG family.
messages: Could be involved in septation.

555079:TOCE RS09290
gene id: 555079:TOCE_RS09290
uniprot id: D9RZ19
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

555079:TOCE RS08010
gene id: 555079:TOCE_RS08010
uniprot id: D9RYB2
names: Similarity
messages: Belongs to the bacterial flagellin family.

555079:TOCE RS02625
gene id: 555079:TOCE_RS02625
uniprot id: D9S1L8
names: Similarity
messages: Belongs to the PemK/MazF family.

555079:TOCE RS04270
gene id: 555079:TOCE_RS04270
uniprot id: D9S2J2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a magnesium transporter.
messages: Belongs to the SLC41A transporter family.
messages: Cell membrane
messages: Homodimer.
messages: Membrane

555079:TOCE RS07250
gene id: 555079:TOCE_RS07250
uniprot id: D9RXX0
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by fructose 1,6-bisphosphate (FBP).
messages: Belongs to the LDH/MDH superfamily. LDH family.
messages: Catalyzes the conversion of lactate to pyruvate.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS03170
gene id: 555079:TOCE_RS03170
uniprot id: D9S1X2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
messages: Membrane

555079:TOCE RS07130
gene id: 555079:TOCE_RS07130
uniprot id: D9RXU5
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
messages: Homodimer.

555079:TOCE RS03160
gene id: 555079:TOCE_RS03160
uniprot id: D9S1X0
names: Function
names: Similarity
messages: Belongs to the aspartokinase family.
messages: Catalyzes the phosphorylation of the beta-carboxyl group of aspartic acid with ATP to yield 4-phospho-L-aspartate, which is involved in the branched biosynthetic pathway leading to the biosynthesis of amino acids threonine, isoleucine and methionine.

555079:TOCE RS07260
gene id: 555079:TOCE_RS07260
uniprot id: D9RXX2
names: Similarity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.

555079:TOCE RS10340
gene id: 555079:TOCE_RS10340
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS04595
gene id: 555079:TOCE_RS04595
uniprot id: D9S2Q7
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial diacylglycerol kinase family.
messages: Membrane
messages: Mn(2+), Zn(2+), Cd(2+) and Co(2+) support activity to lesser extents.

555079:TOCE RS09955
gene id: 555079:TOCE_RS09955
uniprot id: D9RZS6
names: Cofactor
messages: Binds 1 Mg(2+) ion per trimer.

555079:TOCE RS07345
gene id: 555079:TOCE_RS07345
uniprot id: D9RXY8
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS03700
gene id: 555079:TOCE_RS03700
uniprot id: D9S281
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MreD family.
messages: Membrane

555079:TOCE RS07425
gene id: 555079:TOCE_RS07425
uniprot id: D9RY01
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAL/histidase family.
messages: Contains an active site 4-methylidene-imidazol-5-one (MIO), which is formed autocatalytically by cyclization and dehydration of residues Ala-Ser-Gly.
messages: Cytoplasm

555079:TOCE RS09645
gene id: 555079:TOCE_RS09645
uniprot id: D9RZ92
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P-Pant transferase superfamily. AcpS family.
messages: Belongs to the P-Pant transferase superfamily. Gsp/Sfp/HetI/AcpT family.
messages: Cytoplasm
messages: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein.

555079:TOCE RS08270
gene id: 555079:TOCE_RS08270
uniprot id: D9RYG4
names: Similarity
messages: Belongs to the transglycosylase Slt family.

555079:TOCE RS10885
gene id: 555079:TOCE_RS10885
uniprot id: D9S0L0
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS08245
gene id: 555079:TOCE_RS08245
uniprot id: D9RYF9
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS01215
gene id: 555079:TOCE_RS01215
uniprot id: D9S092
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SspH family.
messages: Spore core

555079:TOCE RS08625
gene id: 555079:TOCE_RS08625
uniprot id: D9RYN0
names: Similarity
messages: Belongs to the V-ATPase V0D/AC39 subunit family.

555079:TOCE RS07925
gene id: 555079:TOCE_RS07925
uniprot id: D9RY96
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliS family.
messages: cytosol

555079:TOCE RS02340
gene id: 555079:TOCE_RS02340
uniprot id: D9S1G2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM19 family.
messages: Membrane

555079:TOCE RS04360
gene id: 555079:TOCE_RS04360
uniprot id: D9S2L0
names: Similarity
messages: Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily. Anti-sigma-W factor family.

555079:TOCE RS06795
gene id: 555079:TOCE_RS06795
uniprot id: D9RXP1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S1C family.
messages: Membrane

555079:TOCE RS01000
gene id: 555079:TOCE_RS01000
uniprot id: D9RYE8
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS07565
gene id: 555079:TOCE_RS07565
uniprot id: D9RY29
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PurS family.
messages: Cytoplasm
messages: Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.
messages: Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.

555079:TOCE RS05310
gene id: 555079:TOCE_RS05310
uniprot id: D9S351
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS16 family.

555079:TOCE RS09355
gene id: 555079:TOCE_RS09355
uniprot id: D9RZ32
names: Similarity
messages: Belongs to the sigma-54 factor family.

555079:TOCE RS00310
gene id: 555079:TOCE_RS00310
uniprot id: D9RZF6
names: Similarity
messages: Belongs to the thioredoxin family.

555079:TOCE RS05765
gene id: 555079:TOCE_RS05765
uniprot id: D9S3E2
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
messages: Heterotetramer of two alpha and two beta chains arranged as a dimer of alpha/beta heterodimers.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain.

555079:TOCE RS01885
gene id: 555079:TOCE_RS01885
uniprot id: D9S0Y4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit.
messages: Binds 2 divalent ions per subunit.
messages: Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.

555079:TOCE RS09840
gene id: 555079:TOCE_RS09840
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS09515
gene id: 555079:TOCE_RS09515
uniprot id: D9RZ66
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KAE1 / TsaD family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cytoplasm
messages: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction.

555079:TOCE RS01025
gene id: 555079:TOCE_RS01025
uniprot id: D9S054
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS08250
gene id: 555079:TOCE_RS08250
uniprot id: D9RYG0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.
messages: Belongs to the UppP family.
messages: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.
messages: Cell membrane
messages: Membrane

555079:TOCE RS09420
gene id: 555079:TOCE_RS09420
uniprot id: D9RZ45
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 28 family.
messages: Membrane

555079:TOCE RS01440
gene id: 555079:TOCE_RS01440
uniprot id: D9S0D2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

555079:TOCE RS11520
gene id: 555079:TOCE_RS11520
uniprot id: D9S1B3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0161 family.
messages: Cell membrane
messages: Could be involved in insertion of integral membrane proteins into the membrane.

555079:TOCE RS06265
gene id: 555079:TOCE_RS06265
uniprot id: D9S3N4
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UMP kinase family.
messages: Catalyzes the reversible phosphorylation of UMP to UDP.
messages: Cytoplasm
messages: Homohexamer.
messages: Inhibited by UTP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS00785
gene id: 555079:TOCE_RS00785
uniprot id: D9RZP6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL13 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

555079:TOCE RS01860
gene id: 555079:TOCE_RS01860
uniprot id: D9S0X8
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS12675
gene id: 555079:TOCE_RS12675
uniprot id: D9RZ78
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10165
gene id: 555079:TOCE_RS10165
uniprot id: D9RZW8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

555079:TOCE RS08855
gene id: 555079:TOCE_RS08855
uniprot id: D9RYS6
names: Function
names: Similarity
names: Subunit
messages: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
messages: Belongs to the ClpX chaperone family.
messages: Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

555079:TOCE RS03320
gene id: 555079:TOCE_RS03320
uniprot id: D9S204
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS01835
gene id: 555079:TOCE_RS01835
uniprot id: D9S0X3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell membrane
messages: Membrane

555079:TOCE RS06755
gene id: 555079:TOCE_RS06755
uniprot id: D9RXN3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YqgF HJR family.
messages: Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
messages: Cytoplasm

555079:TOCE RS11410
gene id: 555079:TOCE_RS11410
uniprot id: D9S191
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10700
gene id: 555079:TOCE_RS10700
uniprot id: D9S0I0
names: Activity Regulation
names: Caution
names: Function
names: Similarity
messages: Appears to be allosterically activated by the binding of pArg-containing polypeptides to the pArg-binding pocket localized in the C-terminal domain of McsB.
messages: Belongs to the ATP:guanido phosphotransferase family.
messages: Catalyzes the specific phosphorylation of arginine residues in proteins.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS03725
gene id: 555079:TOCE_RS03725
uniprot id: D9S286
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEDS family. MrdB/RodA subfamily.
messages: Cell membrane
messages: Membrane
messages: Peptidoglycan polymerase that is essential for cell wall elongation.

555079:TOCE RS00085
gene id: 555079:TOCE_RS00085
uniprot id: D9RYY6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DapA family.
messages: Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.
messages: Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB.

555079:TOCE RS09075
gene id: 555079:TOCE_RS09075
uniprot id: D9RYV8
names: Similarity
messages: Belongs to the iron-sulfur dependent L-serine dehydratase family.

555079:TOCE RS03525
gene id: 555079:TOCE_RS03525
uniprot id: D9S244
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

555079:TOCE RS10590
gene id: 555079:TOCE_RS10590
uniprot id: D9S0G2
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

555079:TOCE RS01480
gene id: 555079:TOCE_RS01480
uniprot id: D9S0Q4
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS09635
gene id: 555079:TOCE_RS09635
uniprot id: D9RZ90
names: Function
names: Similarity
messages: Belongs to the alanine racemase family.
messages: Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.

555079:TOCE RS09330
gene id: 555079:TOCE_RS09330
uniprot id: D9RZ27
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the BPG-independent phosphoglycerate mutase family.
messages: Binds 2 manganese ions per subunit.
messages: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
messages: Monomer.

555079:TOCE RS09370
gene id: 555079:TOCE_RS09370
uniprot id: D9RZ35
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
messages: Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.
messages: Cytoplasm

555079:TOCE RS05105
gene id: 555079:TOCE_RS05105
uniprot id: D9S310
names: Function
names: Similarity
names: Subunit
messages: Belongs to the helicase family. PriA subfamily.
messages: Component of the primosome.
messages: Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA.

555079:TOCE RS07835
gene id: 555079:TOCE_RS07835
uniprot id: D9RY77
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family. L-methionine gamma-lyase subfamily.

555079:TOCE RS06270
gene id: 555079:TOCE_RS06270
uniprot id: D9S3N5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
messages: Belongs to the EF-Ts family.
messages: Cytoplasm

555079:TOCE RS00315
gene id: 555079:TOCE_RS00315
uniprot id: D9RZF7
names: Similarity
messages: Belongs to the bacterial solute-binding protein 9 family.

555079:TOCE RS03200
gene id: 555079:TOCE_RS03200
uniprot id: D9S1X7
names: Similarity
messages: Belongs to the EamA transporter family.

555079:TOCE RS07990
gene id: 555079:TOCE_RS07990
uniprot id: D9RYA8
names: Similarity
messages: Belongs to the DegT/DnrJ/EryC1 family.

555079:TOCE RS04735
gene id: 555079:TOCE_RS04735
uniprot id: D9S2T6
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS01685
gene id: 555079:TOCE_RS01685
uniprot id: D9S0U3
names: Caution
names: Function
names: Similarity
messages: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
messages: Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS11515
gene id: 555079:TOCE_RS11515
uniprot id: D9S1B2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OXA1/ALB3/YidC family.
messages: Membrane

555079:TOCE RS07355
gene id: 555079:TOCE_RS07355
uniprot id: D9RXZ0
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the shikimate dehydrogenase family.
messages: Homodimer.
messages: Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS09580
gene id: 555079:TOCE_RS09580
uniprot id: D9RZ79
names: Subcellular Location Annotation
messages: Cytoplasm

555079:TOCE RS04535
gene id: 555079:TOCE_RS04535
uniprot id: D9S2P5
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DnaJ family.
messages: Binds 2 Zn(2+) ions per monomer.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
messages: The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity.

555079:TOCE RS06440
gene id: 555079:TOCE_RS06440
uniprot id: D9RYE8
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS10695
gene id: 555079:TOCE_RS10695
uniprot id: D9S0H9
names: Similarity
messages: Belongs to the ClpA/ClpB family.

555079:TOCE RS01175
gene id: 555079:TOCE_RS01175
uniprot id: D9S085
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS09070
gene id: 555079:TOCE_RS09070
uniprot id: D9RYV7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
messages: Membrane

555079:TOCE RS07795
gene id: 555079:TOCE_RS07795
uniprot id: D9RY70
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

555079:TOCE RS00835
gene id: 555079:TOCE_RS00835
uniprot id: D9S026
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.

555079:TOCE RS04105
gene id: 555079:TOCE_RS04105
uniprot id: D9S2F8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of glycine to tRNA(Gly).
messages: Cytoplasm
messages: Homodimer.

555079:TOCE RS02475
gene id: 555079:TOCE_RS02475
uniprot id: D9S1I7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-2 integral membrane protein family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS05970
gene id: 555079:TOCE_RS05970
uniprot id: D9S3H8
names: Similarity
messages: Belongs to the methylmalonyl-CoA epimerase family.

555079:TOCE RS09540
gene id: 555079:TOCE_RS09540
uniprot id: D9RZ71
names: Similarity
messages: Belongs to the 6-phosphogluconate dehydrogenase family.

555079:TOCE RS09375
gene id: 555079:TOCE_RS09375
uniprot id: D9RZ36
names: Similarity
messages: Belongs to the desulfoferrodoxin family.

555079:TOCE RS07790
gene id: 555079:TOCE_RS07790
uniprot id: D9RY69
names: Similarity
messages: In the N-terminal section; belongs to the NADH:flavin oxidoreductase/NADH oxidase family.

555079:TOCE RS03710
gene id: 555079:TOCE_RS03710
uniprot id: D9S283
names: Function
names: Similarity
names: Subunit
messages: Belongs to the MinC family.
messages: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
messages: Interacts with MinD and FtsZ.

555079:TOCE RS01660
gene id: 555079:TOCE_RS01660
uniprot id: D9S0T9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ALAD family.
messages: Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.
messages: Homooctamer.

555079:TOCE RS09225
gene id: 555079:TOCE_RS09225
uniprot id: D9RZ07
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OadG family.
messages: Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.
messages: Cell membrane

555079:TOCE RS06500
gene id: 555079:TOCE_RS06500
uniprot id: D9S3T0
names: Function
names: Similarity
messages: Belongs to the RecN family.
messages: May be involved in recombinational repair of damaged DNA.

555079:TOCE RS04530
gene id: 555079:TOCE_RS04530
uniprot id: D9S2P4
names: Function
names: Induction
names: Similarity
messages: Acts as a chaperone.
messages: Belongs to the heat shock protein 70 family.
messages: By stress conditions e.g. heat shock.

555079:TOCE RS06520
gene id: 555079:TOCE_RS06520
uniprot id: D9S3T4
names: Similarity
messages: Belongs to the TlyA family.

555079:TOCE RS07820
gene id: 555079:TOCE_RS07820
uniprot id: D9RY75
names: Similarity
messages: Belongs to the PHP hydrolase family. HisK subfamily.

555079:TOCE RS05510
gene id: 555079:TOCE_RS05510
uniprot id: D9S390
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MotA family.
messages: Membrane

555079:TOCE RS08810
gene id: 555079:TOCE_RS08810
uniprot id: D9RYR7
names: Function
names: Similarity
messages: Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
messages: DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.

555079:TOCE RS07240
gene id: 555079:TOCE_RS07240
uniprot id: D9RXW7
names: Similarity
messages: Belongs to the SorC transcriptional regulatory family.

555079:TOCE RS10265
gene id: 555079:TOCE_RS10265
uniprot id: D9RZY5
names: Similarity
messages: Belongs to the V-ATPase V0D/AC39 subunit family.

555079:TOCE RS07865
gene id: 555079:TOCE_RS07865
uniprot id: D9RY84
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetokinase family.
messages: Cytoplasm

555079:TOCE RS03305
gene id: 555079:TOCE_RS03305
uniprot id: D9S201
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
messages: Belongs to the amidase family. GatA subfamily.
messages: Heterotrimer of A, B and C subunits.

555079:TOCE RS06470
gene id: 555079:TOCE_RS06470
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS08180
gene id: 555079:TOCE_RS08180
uniprot id: D9RYE7
names: Similarity
messages: Belongs to the transposase IS21/IS408/IS1162 family.

555079:TOCE RS07810
gene id: 555079:TOCE_RS07810
uniprot id: D9RY73
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.

555079:TOCE RS02540
gene id: 555079:TOCE_RS02540
uniprot id: D9S1K0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial sugar transferase family.
messages: Membrane

555079:TOCE RS08500
gene id: 555079:TOCE_RS08500
uniprot id: D9RYK7
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 zinc ion.
messages: Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.
messages: In the C-terminal section; belongs to the HTP reductase family.
messages: In the N-terminal section; belongs to the cytidine and deoxycytidylate deaminase family.

555079:TOCE RS03850
gene id: 555079:TOCE_RS03850
uniprot id: D9S2B1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm

555079:TOCE RS05640
gene id: 555079:TOCE_RS05640
uniprot id: D9S3B6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MnmA/TRMU family.
messages: Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS07800
gene id: 555079:TOCE_RS07800
uniprot id: D9RY71
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS05240
gene id: 555079:TOCE_RS05240
uniprot id: D9S337
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PlsX family.
messages: Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
messages: Cytoplasm
messages: Homodimer. Probably interacts with PlsY.

555079:TOCE RS07890
gene id: 555079:TOCE_RS07890
uniprot id: D9RY89
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS05415
gene id: 555079:TOCE_RS05415
uniprot id: D9S371
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 'phage' integrase family. XerC subfamily.
messages: Belongs to the 'phage' integrase family. XerD subfamily.
messages: Cytoplasm
messages: Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.

555079:TOCE RS01380
gene id: 555079:TOCE_RS01380
uniprot id: D9S0C0
names: Cofactor
messages: Binds 1 Mg(2+) ion per trimer.

555079:TOCE RS08680
gene id: 555079:TOCE_RS08680
uniprot id: D9RYP1
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

555079:TOCE RS01870
gene id: 555079:TOCE_RS01870
uniprot id: D9S0Y1
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Although this enzyme belongs to the family of MTA phosphorylases based on sequence homology, it lacks several conserved amino acids in the substrate binding pocket that confer specificity towards MTA.
messages: Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
messages: Homohexamer. Dimer of a homotrimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Purine nucleoside phosphorylase involved in purine salvage.

555079:TOCE RS00645
gene id: 555079:TOCE_RS00645
uniprot id: D9RZL8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
messages: Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

555079:TOCE RS01095
gene id: 555079:TOCE_RS01095
uniprot id: D9S069
names: Function
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

555079:TOCE RS10395
gene id: 555079:TOCE_RS10395
uniprot id: D9S007
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.
messages: Membrane

555079:TOCE RS01260
gene id: 555079:TOCE_RS01260
uniprot id: D9S0A0
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.

555079:TOCE RS00245
gene id: 555079:TOCE_RS00245
uniprot id: D9RZE7
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.
messages: Cytoplasm
messages: Homotrimer.
messages: In the C-terminal section; belongs to the transferase hexapeptide repeat family.
messages: In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS07895
gene id: 555079:TOCE_RS07895
uniprot id: D9RY90
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

555079:TOCE RS09820
gene id: 555079:TOCE_RS09820
uniprot id: D9RYE8
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS01850
gene id: 555079:TOCE_RS01850
uniprot id: D9S0X6
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
messages: Binds 1 divalent metal cation per subunit. Can use either Co(2+) or Zn(2+).
messages: Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS05335
gene id: 555079:TOCE_RS05335
uniprot id: D9S356
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
messages: Cytoplasm
messages: Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity.

555079:TOCE RS10380
gene id: 555079:TOCE_RS10380
uniprot id: D9S004
names: Similarity
messages: Belongs to the LacAB/RpiB family.

555079:TOCE RS02345
gene id: 555079:TOCE_RS02345
uniprot id: D9S1G3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-Y family.
messages: Binds 2 magnesium ions per subunit.
messages: Cytoplasm
messages: Monomer.
messages: Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.

555079:TOCE RS11720
gene id: 555079:TOCE_RS11720
uniprot id: D9RYK8
names: Similarity
messages: Belongs to the glycosyl hydrolase 130 family.

555079:TOCE RS06085
gene id: 555079:TOCE_RS06085
uniprot id: D9S3K1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methylthiotransferase family. RimO subfamily.
messages: Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein uS12.
messages: Cytoplasm

555079:TOCE RS05815
gene id: 555079:TOCE_RS05815
uniprot id: D9S3E6
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M42 family.
messages: Binds 2 divalent metal cations per subunit.

555079:TOCE RS01210
gene id: 555079:TOCE_RS01210
uniprot id: D9S091
names: Similarity
messages: Belongs to the UPF0045 family.

555079:TOCE RS00100
gene id: 555079:TOCE_RS00100
uniprot id: D9RYY9
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the thiamine-phosphate synthase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).

555079:TOCE RS01515
gene id: 555079:TOCE_RS01515
uniprot id: D9S0R1
names: Similarity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.

555079:TOCE RS06170
gene id: 555079:TOCE_RS06170
uniprot id: D9S3L5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RbfA family.
messages: Cytoplasm
messages: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.

555079:TOCE RS09650
gene id: 555079:TOCE_RS09650
uniprot id: D9RZ93
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

555079:TOCE RS06490
gene id: 555079:TOCE_RS06490
uniprot id: D9S3S8
names: Cofactor
names: Function
names: Subcellular Location Annotation
messages: Binds 1 Ca(2+) ion per subunit.
messages: Cytoplasm
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS02655
gene id: 555079:TOCE_RS02655
uniprot id: D9S1M4
names: Similarity
messages: Belongs to the CRISPR-associated Csm3 family.

555079:TOCE RS01250
gene id: 555079:TOCE_RS01250
uniprot id: D9S098
names: Similarity
messages: Belongs to the asp23 family.

555079:TOCE RS04725
gene id: 555079:TOCE_RS04725
uniprot id: D9S2T4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 4 family. MraY subfamily.
messages: Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.
messages: Cell membrane
messages: Membrane

555079:TOCE RS03155
gene id: 555079:TOCE_RS03155
uniprot id: D9S1W9
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aspartate-semialdehyde dehydrogenase family.
messages: Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS10720
gene id: 555079:TOCE_RS10720
uniprot id: D9S0I4
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.

555079:TOCE RS10310
gene id: 555079:TOCE_RS10310
uniprot id: D9RZZ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Membrane

555079:TOCE RS04915
gene id: 555079:TOCE_RS04915
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS01805
gene id: 555079:TOCE_RS01805
uniprot id: D9S0W7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell membrane
messages: Membrane

555079:TOCE RS08920
gene id: 555079:TOCE_RS08920
uniprot id: D9RYT2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS05210
gene id: 555079:TOCE_RS05210
uniprot id: D9S331
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TmcAL family.
messages: Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac-AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS08465
gene id: 555079:TOCE_RS08465
uniprot id: D9RYK0
names: Similarity
messages: Belongs to the peptidase S41A family.

555079:TOCE RS09125
gene id: 555079:TOCE_RS09125
uniprot id: D9RYW8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
messages: Cytoplasm
messages: GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
messages: Monomer. Associates with the 50S ribosomal subunit.

555079:TOCE RS07495
gene id: 555079:TOCE_RS07495
uniprot id: D9RY15
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS06510
gene id: 555079:TOCE_RS06510
uniprot id: D9S3T2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD kinase family.
messages: Cytoplasm
messages: Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS08390
gene id: 555079:TOCE_RS08390
uniprot id: D9RYI5
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS00925
gene id: 555079:TOCE_RS00925
uniprot id: D9S038
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
messages: Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
messages: Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.
messages: Cytoplasm
messages: Homodimer. The tRNA molecule binds across the dimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS04415
gene id: 555079:TOCE_RS04415
uniprot id: D9S2M1
names: Similarity
messages: Belongs to the OsmC/Ohr family.

555079:TOCE RS06980
gene id: 555079:TOCE_RS06980
uniprot id: D9RXS3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
messages: Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity.
messages: Homodimer.

555079:TOCE RS00795
gene id: 555079:TOCE_RS00795
uniprot id: D9S018
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Homodimer.

555079:TOCE RS03210
gene id: 555079:TOCE_RS03210
uniprot id: D9S1X9
names: Similarity
names: Subunit
messages: Belongs to the beta-eliminating lyase family.
messages: Homotetramer.

555079:TOCE RS03895
gene id: 555079:TOCE_RS03895
uniprot id: D9S2B8
names: Function
names: Similarity
messages: Belongs to the peptidase S11 family.
messages: Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.

555079:TOCE RS05890
gene id: 555079:TOCE_RS05890
uniprot id: D9S3G2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase S24 family.
messages: Homodimer.
messages: Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.

555079:TOCE RS11510
gene id: 555079:TOCE_RS11510
uniprot id: D9S1B1
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A probable RNA chaperone. Forms a complex with KhpA which binds to cellular RNA and controls its expression. Plays a role in peptidoglycan (PG) homeostasis and cell length regulation.
messages: Belongs to the KhpB RNA-binding protein family.
messages: Cytoplasm
messages: Forms a complex with KhpA.
messages: Has an N-terminal Jag-N domain and 2 RNA-binding domains (KH and R3H).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS04230
gene id: 555079:TOCE_RS04230
uniprot id: D9S2I3
names: Function
names: Similarity
names: Subunit
messages: Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction.
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.

555079:TOCE RS06250
gene id: 555079:TOCE_RS06250
uniprot id: D9S3N1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDS family.
messages: Membrane

555079:TOCE RS04775
gene id: 555079:TOCE_RS04775
uniprot id: D9S2U4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsZ family.
messages: Cytoplasm
messages: Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
messages: Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins.

555079:TOCE RS09815
gene id: 555079:TOCE_RS09815
uniprot id: D9RYE7
names: Similarity
messages: Belongs to the transposase IS21/IS408/IS1162 family.

555079:TOCE RS07845
gene id: 555079:TOCE_RS07845
uniprot id: D9RY80
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
messages: Membrane

555079:TOCE RS06240
gene id: 555079:TOCE_RS06240
uniprot id: D9S3M9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50B family.
messages: Membrane

555079:TOCE RS11100
gene id: 555079:TOCE_RS11100
uniprot id: D9S132
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-I family.

555079:TOCE RS08840
gene id: 555079:TOCE_RS08840
uniprot id: D9RYS3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LuxS family.
messages: Binds 1 Fe cation per subunit.
messages: Homodimer.
messages: Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).

555079:TOCE RS06135
gene id: 555079:TOCE_RS06135
uniprot id: D9S3K8
names: Caution
names: Function
names: Similarity
messages: Belongs to the dUTPase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.

555079:TOCE RS02460
gene id: 555079:TOCE_RS02460
uniprot id: D9S1I4
names: Similarity
messages: Belongs to the peptidase S8 family.

555079:TOCE RS04880
gene id: 555079:TOCE_RS04880
uniprot id: D9S2W5
names: Function
names: Subcellular Location Annotation
messages: ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
messages: Cytoplasm

555079:TOCE RS10920
gene id: 555079:TOCE_RS10920
uniprot id: D9S0L7
names: Similarity
messages: Belongs to the HepT RNase toxin family.

555079:TOCE RS03345
gene id: 555079:TOCE_RS03345
uniprot id: D9S209
names: Similarity
messages: Belongs to the threonine aldolase family.

555079:TOCE RS03805
gene id: 555079:TOCE_RS03805
uniprot id: D9S2A2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.

555079:TOCE RS05320
gene id: 555079:TOCE_RS05320
uniprot id: D9S353
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
messages: Belongs to the RimM family.
messages: Binds ribosomal protein uS19.
messages: Cytoplasm
messages: The PRC barrel domain binds ribosomal protein uS19.

555079:TOCE RS00210
gene id: 555079:TOCE_RS00210
uniprot id: D9RZE0
names: Function
names: Similarity
messages: Belongs to the peptidase S51 family.
messages: Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides.

555079:TOCE RS05990
gene id: 555079:TOCE_RS05990
uniprot id: D9S3I2
names: Similarity
messages: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.

555079:TOCE RS05760
gene id: 555079:TOCE_RS05760
uniprot id: D9S3E1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IPP isomerase type 2 family.
messages: Cytoplasm
messages: Homooctamer. Dimer of tetramers.
messages: Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS11155
gene id: 555079:TOCE_RS11155
uniprot id: D9S144
names: Similarity
messages: Belongs to the EamA transporter family.

555079:TOCE RS04325
gene id: 555079:TOCE_RS04325
uniprot id: D9S2K3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-C family. DnaE subfamily.
messages: Cytoplasm
messages: DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase.

555079:TOCE RS05060
gene id: 555079:TOCE_RS05060
uniprot id: D9S301
names: Function
names: Similarity
names: Subunit
messages: Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
messages: Homodimer and homohexamer; in equilibrium.
messages: Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes.

555079:TOCE RS05565
gene id: 555079:TOCE_RS05565
uniprot id: D9S3A1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
messages: Cell membrane
messages: Membrane
messages: Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.

555079:TOCE RS06895
gene id: 555079:TOCE_RS06895
uniprot id: D9RXR2
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvA family.
messages: Cytoplasm
messages: Has three domains with a flexible linker between the domains II and III and assumes an 'L' shape. Domain III is highly mobile and contacts RuvB.
messages: Homotetramer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.

555079:TOCE RS00705
gene id: 555079:TOCE_RS00705
uniprot id: D9RZN0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Binds to the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

555079:TOCE RS05295
gene id: 555079:TOCE_RS05295
uniprot id: D9S348
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. FtsY subfamily.
messages: Cell membrane
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
messages: Membrane
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.

555079:TOCE RS10505
gene id: 555079:TOCE_RS10505
uniprot id: D9S0E8
names: Similarity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.

555079:TOCE RS09535
gene id: 555079:TOCE_RS09535
uniprot id: D9RZ70
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
messages: Cell membrane
messages: Membrane
messages: Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex.

555079:TOCE RS03255
gene id: 555079:TOCE_RS03255
uniprot id: D9S1Z1
names: Similarity
messages: Belongs to the glycerate kinase type-1 family.

555079:TOCE RS05670
gene id: 555079:TOCE_RS05670
uniprot id: D9S3C3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ScpA family.
messages: Component of a cohesin-like complex composed of ScpA, ScpB and the Smc homodimer, in which ScpA and ScpB bind to the head domain of Smc. The presence of the three proteins is required for the association of the complex with DNA.
messages: Cytoplasm
messages: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.

555079:TOCE RS05755
gene id: 555079:TOCE_RS05755
uniprot id: D9S3E0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspH family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.

555079:TOCE RS01245
gene id: 555079:TOCE_RS01245
uniprot id: D9S097
names: Similarity
messages: Belongs to the glycosyl hydrolase 18 family.

555079:TOCE RS06540
gene id: 555079:TOCE_RS06540
uniprot id: D9S3T7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseB family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

555079:TOCE RS00220
gene id: 555079:TOCE_RS00220
uniprot id: D9RZE2
names: Function
names: Similarity
messages: Belongs to the GHMP kinase family. IspE subfamily.
messages: Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.

555079:TOCE RS01900
gene id: 555079:TOCE_RS01900
uniprot id: D9S0Y7
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS03290
gene id: 555079:TOCE_RS03290
uniprot id: D9S1Z8
names: Similarity
messages: Belongs to the four-carbon acid sugar kinase family.

555079:TOCE RS02765
gene id: 555079:TOCE_RS02765
uniprot id: D9S1P2
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS05725
gene id: 555079:TOCE_RS05725
uniprot id: D9S3D4
names: Similarity
messages: Belongs to the arginase family. Agmatinase subfamily.

555079:TOCE RS05085
gene id: 555079:TOCE_RS05085
uniprot id: D9S306
names: Similarity
messages: Belongs to the RemA family.

555079:TOCE RS00495
gene id: 555079:TOCE_RS00495
uniprot id: D9RZI9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-C family. DnaE subfamily.
messages: Cytoplasm
messages: DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase.

555079:TOCE RS04640
gene id: 555079:TOCE_RS04640
uniprot id: D9S2R6
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaG primase family.
messages: Binds 1 zinc ion per monomer.
messages: Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.
messages: Monomer. Interacts with DnaB.
messages: RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.

555079:TOCE RS08185
gene id: 555079:TOCE_RS08185
uniprot id: D9RYE8
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS02545
gene id: 555079:TOCE_RS02545
uniprot id: D9S1K1
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

555079:TOCE RS05930
gene id: 555079:TOCE_RS05930
uniprot id: D9S3H0
names: Function
names: Similarity
messages: Belongs to the DNA mismatch repair MutS family.
messages: This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.

555079:TOCE RS11235
gene id: 555079:TOCE_RS11235
uniprot id: D9RYE5
names: Similarity
messages: Belongs to the IS21/IS1162 putative ATP-binding protein family.

555079:TOCE RS00825
gene id: 555079:TOCE_RS00825
uniprot id: D9S024
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the branched chain amino acid transporter family.
messages: Cell membrane
messages: Component of the transport system for branched-chain amino acids.
messages: Membrane

555079:TOCE RS07155
gene id: 555079:TOCE_RS07155
uniprot id: D9RXV0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CobD/CbiB family.
messages: Cell membrane
messages: Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

555079:TOCE RS05185
gene id: 555079:TOCE_RS05185
uniprot id: D9S326
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial CoaD family.
messages: Cytoplasm
messages: Homohexamer.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

555079:TOCE RS08635
gene id: 555079:TOCE_RS08635
uniprot id: D9RYN2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the V-ATPase proteolipid subunit family.
messages: Membrane

555079:TOCE RS04145
gene id: 555079:TOCE_RS04145
uniprot id: D9S2G6
names: Similarity
messages: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.

555079:TOCE RS11210
gene id: 555079:TOCE_RS11210
uniprot id: D9S154
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase RlmH family.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.

555079:TOCE RS06290
gene id: 555079:TOCE_RS06290
uniprot id: D9S3N9
names: Similarity
messages: Belongs to the FldB/FldC dehydratase alpha/beta subunit family.

555079:TOCE RS03830
gene id: 555079:TOCE_RS03830
uniprot id: D9S2A7
names: Function
names: Similarity
messages: Belongs to the NadD family.
messages: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).

555079:TOCE RS10990
gene id: 555079:TOCE_RS10990
uniprot id: D9S0N0
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS04305
gene id: 555079:TOCE_RS04305
uniprot id: D9S2J9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the gluconeogenesis factor family.
messages: Cytoplasm
messages: Required for morphogenesis under gluconeogenic growth conditions.

555079:TOCE RS02390
gene id: 555079:TOCE_RS02390
uniprot id: D9S1H1
names: Similarity
messages: Belongs to the hemerythrin family.

555079:TOCE RS06275
gene id: 555079:TOCE_RS06275
uniprot id: D9S3N6
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

555079:TOCE RS02530
gene id: 555079:TOCE_RS02530
uniprot id: D9S1J8
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS10060
gene id: 555079:TOCE_RS10060
uniprot id: D9RZU7
names: Function
messages: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

555079:TOCE RS01940
gene id: 555079:TOCE_RS01940
uniprot id: D9S0Z5
names: Similarity
messages: Belongs to the 4-hydroxy-2-oxovalerate aldolase family.

555079:TOCE RS08945
gene id: 555079:TOCE_RS08945
uniprot id: D9RYT7
names: Similarity
messages: Belongs to the peptidase S8 family.

555079:TOCE RS10375
gene id: 555079:TOCE_RS10375
uniprot id: D9S003
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

555079:TOCE RS06205
gene id: 555079:TOCE_RS06205
uniprot id: D9S3M2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MgtC/SapB family.
messages: Membrane

555079:TOCE RS07455
gene id: 555079:TOCE_RS07455
uniprot id: D9RY07
names: Similarity
messages: Belongs to the SfsA family.

555079:TOCE RS05065
gene id: 555079:TOCE_RS05065
uniprot id: D9S302
names: Function
names: Similarity
names: Subunit
messages: Associates with stalled 50S ribosomal subunits.
messages: Belongs to the NEMF family.
messages: Part of the ribosome quality control system (RQC). Recruits Ala-charged tRNA and directs the elongation of stalled nascent chains on 50S ribosomal subunits, leading to non-templated C-terminal Ala extensions (Ala tail). The Ala tail promotes nascent chain degradation. May add between 1 and at least 8 Ala residues. Binds to stalled 50S ribosomal subunits.

555079:TOCE RS00455
gene id: 555079:TOCE_RS00455
uniprot id: D9RZI2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TVP38/TMEM64 family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS01085
gene id: 555079:TOCE_RS01085
uniprot id: D9S067
names: Subcellular Location Annotation
messages: Membrane

555079:TOCE RS05205
gene id: 555079:TOCE_RS05205
uniprot id: D9S330
names: Similarity
messages: Belongs to the peptidase S16 family.

555079:TOCE RS03005
gene id: 555079:TOCE_RS03005
uniprot id: D9S1U0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphopentomutase family.
messages: Binds 1 or 2 manganese ions.
messages: Cytoplasm
messages: Phosphotransfer between the C1 and C5 carbon atoms of pentose.

555079:TOCE RS11045
gene id: 555079:TOCE_RS11045
uniprot id: D9S0P2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS09215
gene id: 555079:TOCE_RS09215
uniprot id: D9RZ05
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

555079:TOCE RS06825
gene id: 555079:TOCE_RS06825
uniprot id: D9RXP7
names: Similarity
messages: Belongs to the RecJ family.

555079:TOCE RS01755
gene id: 555079:TOCE_RS01755
uniprot id: D9S0V7
names: Cofactor
messages: Binds 1 Mg(2+) ion per trimer.

555079:TOCE RS10085
gene id: 555079:TOCE_RS10085
uniprot id: D9RZV2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioester dehydratase family. FabZ subfamily.
messages: Cytoplasm
messages: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.

555079:TOCE RS03660
gene id: 555079:TOCE_RS03660
uniprot id: D9S273
names: Function
names: Subcellular Location Annotation
messages: Chaperone that serves for the intracellular sequestration and transport of Cu(+). Delivers Cu(+) to the copper-exporting P-type ATPase A (CopA).
messages: Cytoplasm

555079:TOCE RS05560
gene id: 555079:TOCE_RS05560
uniprot id: D9S3A0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type III secretion exporter family.
messages: Cell membrane
messages: Membrane
messages: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.

555079:TOCE RS05050
gene id: 555079:TOCE_RS05050
uniprot id: D9S2Z9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A8 family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: This protein specifically catalyzes the removal of signal peptides from prolipoproteins.

555079:TOCE RS05365
gene id: 555079:TOCE_RS05365
uniprot id: D9S361
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MepA subfamily.
messages: Cell membrane

555079:TOCE RS09265
gene id: 555079:TOCE_RS09265
uniprot id: D9RZ15
names: Similarity
messages: Belongs to the DSD1 family.

555079:TOCE RS05440
gene id: 555079:TOCE_RS05440
uniprot id: D9S376
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod.

555079:TOCE RS02315
gene id: 555079:TOCE_RS02315
uniprot id: D9S1F6
names: Similarity
messages: Belongs to the FldB/FldC dehydratase alpha/beta subunit family.

555079:TOCE RS03880
gene id: 555079:TOCE_RS03880
uniprot id: D9S2B6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FNT transporter (TC 2.A.44) family.
messages: Membrane

555079:TOCE RS09170
gene id: 555079:TOCE_RS09170
uniprot id: D9RYZ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
messages: Belongs to the RNR ribonuclease family. RNase R subfamily.
messages: Cytoplasm

555079:TOCE RS08040
gene id: 555079:TOCE_RS08040
uniprot id: D9RYB9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HPF/YfiA ribosome-associated protein family. Long HPF subfamily.
messages: Cytoplasm
messages: Interacts with 100S ribosomes.
messages: Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.

555079:TOCE RS10675
gene id: 555079:TOCE_RS10675
uniprot id: D9S0H5
names: Similarity
messages: Belongs to the ycf81 family.

555079:TOCE RS11060
gene id: 555079:TOCE_RS11060
uniprot id: D9S0P5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

555079:TOCE RS00750
gene id: 555079:TOCE_RS00750
uniprot id: D9RZN9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

555079:TOCE RS09345
gene id: 555079:TOCE_RS09345
uniprot id: D9RZ30
names: Similarity
messages: Belongs to the SorC transcriptional regulatory family.

555079:TOCE RS05015
gene id: 555079:TOCE_RS05015
uniprot id: D9S2Z2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SepF family.
messages: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
messages: Cytoplasm
messages: Homodimer. Interacts with FtsZ.

555079:TOCE RS06190
gene id: 555079:TOCE_RS06190
uniprot id: D9S3L9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NusA family.
messages: Cytoplasm
messages: Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.
messages: Participates in both transcription termination and antitermination.

555079:TOCE RS07150
gene id: 555079:TOCE_RS07150
uniprot id: D9RXU9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CobS family.
messages: Cell membrane
messages: Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.
messages: Membrane

555079:TOCE RS05470
gene id: 555079:TOCE_RS05470
uniprot id: D9S382
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.
messages: Cytoplasm

555079:TOCE RS10650
gene id: 555079:TOCE_RS10650
uniprot id: D9S0H0
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer.

555079:TOCE RS02650
gene id: 555079:TOCE_RS02650
uniprot id: D9S1M3
names: Function
names: Similarity
messages: Belongs to the CRISPR-associated Csm2 family.
messages: This subunit may be involved in monitoring complementarity of crRNA and target RNA.

555079:TOCE RS09200
gene id: 555079:TOCE_RS09200
uniprot id: D9RZ02
names: Similarity
messages: Belongs to the class-I fumarase family.

555079:TOCE RS04675
gene id: 555079:TOCE_RS04675
uniprot id: D9S2S5
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

555079:TOCE RS06770
gene id: 555079:TOCE_RS06770
uniprot id: D9RXN6
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
messages: Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.
messages: Cytoplasm

555079:TOCE RS04785
gene id: 555079:TOCE_RS04785
uniprot id: D9S2U6
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

555079:TOCE RS09090
gene id: 555079:TOCE_RS09090
uniprot id: D9RYW1
names: Similarity
messages: Belongs to the RutC family.

555079:TOCE RS05010
gene id: 555079:TOCE_RS05010
uniprot id: D9S2Z1
names: Function
names: Similarity
messages: Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
messages: Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.

555079:TOCE RS07450
gene id: 555079:TOCE_RS07450
uniprot id: D9RY06
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

555079:TOCE RS06075
gene id: 555079:TOCE_RS06075
uniprot id: D9S3J9
names: Similarity
messages: Belongs to the AAA ATPase family.
messages: In the C-terminal section; belongs to the peptidase M41 family.

555079:TOCE RS07525
gene id: 555079:TOCE_RS07525
uniprot id: D9RY21
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

555079:TOCE RS05455
gene id: 555079:TOCE_RS05455
uniprot id: D9S379
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliF family.
messages: Membrane
messages: The M ring may be actively involved in energy transduction.

555079:TOCE RS07430
gene id: 555079:TOCE_RS07430
uniprot id: D9RY02
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

555079:TOCE RS04255
gene id: 555079:TOCE_RS04255
uniprot id: D9S2I8
names: Similarity
messages: Belongs to the histone deacetylase family.