521674:PLIM RS24540
gene id: 521674:PLIM_RS24540
uniprot id: D5SYE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A24 family.
messages: Membrane

521674:PLIM RS17395
gene id: 521674:PLIM_RS17395
uniprot id: D5SUE5
names: Cofactor
names: Similarity
messages: Belongs to the RtcB family.
messages: Binds 2 manganese ions per subunit.

521674:PLIM RS05315
gene id: 521674:PLIM_RS05315
uniprot id: D5STA4
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS13500
gene id: 521674:PLIM_RS13500
uniprot id: D5SQI9
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with bS18 to 16S ribosomal RNA.

521674:PLIM RS09120
gene id: 521674:PLIM_RS09120
uniprot id: D5SXM2
names: Caution
names: Function
names: Similarity
messages: Belongs to the GART family.
messages: Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS17420
gene id: 521674:PLIM_RS17420
uniprot id: D5SUE8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Membrane

521674:PLIM RS15355
gene id: 521674:PLIM_RS15355
uniprot id: D5SS85
names: Function
names: Similarity
messages: Belongs to the PINc/VapC protein family.
messages: Toxic component of a toxin-antitoxin (TA) system. An RNase.

521674:PLIM RS04495
gene id: 521674:PLIM_RS04495
uniprot id: D5SSF2
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.
messages: Binds directly to 16S ribosomal RNA.

521674:PLIM RS14095
gene id: 521674:PLIM_RS14095
uniprot id: D5SR72
names: Similarity
messages: Belongs to the carotenoid/retinoid oxidoreductase family.

521674:PLIM RS03475
gene id: 521674:PLIM_RS03475
uniprot id: D5SR29
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).
messages: Belongs to the AccD/PCCB family.
messages: Binds 1 zinc ion per subunit.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
messages: Cytoplasm

521674:PLIM RS23225
gene id: 521674:PLIM_RS23225
uniprot id: D5SV05
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS19345
gene id: 521674:PLIM_RS19345
uniprot id: D5SWH9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

521674:PLIM RS06035
gene id: 521674:PLIM_RS06035
uniprot id: D5SU18
names: Function
names: Subcellular Location Annotation
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body

521674:PLIM RS18180
gene id: 521674:PLIM_RS18180
uniprot id: D5SV61
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

521674:PLIM RS04080
gene id: 521674:PLIM_RS04080
uniprot id: D5SRT2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of tryptophan to tRNA(Trp).
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS12815
gene id: 521674:PLIM_RS12815
uniprot id: D5SPT8
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.

521674:PLIM RS12895
gene id: 521674:PLIM_RS12895
uniprot id: D5SPV3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

521674:PLIM RS23245
gene id: 521674:PLIM_RS23245
uniprot id: D5SVQ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CoaE family.
messages: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
messages: Cytoplasm

521674:PLIM RS12130
gene id: 521674:PLIM_RS12130
uniprot id: D5SP34
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS11965
gene id: 521674:PLIM_RS11965
uniprot id: D5SNN7
names: Similarity
messages: Belongs to the universal stress protein A family.

521674:PLIM RS08140
gene id: 521674:PLIM_RS08140
uniprot id: D5SWQ2
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

521674:PLIM RS02475
gene id: 521674:PLIM_RS02475
uniprot id: D5SQ69
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

521674:PLIM RS19875
gene id: 521674:PLIM_RS19875
uniprot id: D5SX56
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 6 family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS13860
gene id: 521674:PLIM_RS13860
uniprot id: D5SQQ6
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

521674:PLIM RS20110
gene id: 521674:PLIM_RS20110
uniprot id: D5SXA2
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS11645
gene id: 521674:PLIM_RS11645
uniprot id: D5SNH2
names: Similarity
messages: Belongs to the cytochrome P450 family.

521674:PLIM RS01360
gene id: 521674:PLIM_RS01360
uniprot id: D5SNW4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS15665
gene id: 521674:PLIM_RS15665
uniprot id: D5SSS2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.
messages: Membrane

521674:PLIM RS22585
gene id: 521674:PLIM_RS22585
uniprot id: D5SV95
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell inner membrane
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS06605
gene id: 521674:PLIM_RS06605
uniprot id: D5SUQ9
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS19220
gene id: 521674:PLIM_RS19220
uniprot id: D5SWF6
names: Similarity
messages: Belongs to the peptidase S1C family.

521674:PLIM RS13920
gene id: 521674:PLIM_RS13920
uniprot id: D5SQR7
names: Function
names: Subcellular Location Annotation
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body

521674:PLIM RS04480
gene id: 521674:PLIM_RS04480
uniprot id: D5SSE9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
messages: Cytoplasm
messages: Homotetramer.
messages: Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate.
messages: There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors.

521674:PLIM RS00260
gene id: 521674:PLIM_RS00260
uniprot id: D5SMI2
names: Similarity
messages: Belongs to the DprA/Smf family.

521674:PLIM RS14435
gene id: 521674:PLIM_RS14435
uniprot id: D5SRD8
names: Similarity
messages: Belongs to the homoserine dehydrogenase family.

521674:PLIM RS05960
gene id: 521674:PLIM_RS05960
uniprot id: D5SU02
names: Similarity
messages: Belongs to the peptidase S41A family.

521674:PLIM RS02550
gene id: 521674:PLIM_RS02550
uniprot id: D5SQ84
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

521674:PLIM RS21110
gene id: 521674:PLIM_RS21110
uniprot id: D5SZ16
names: Caution
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PanD family.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
messages: Cytoplasm
messages: Heterooctamer of four alpha and four beta subunits.
messages: Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS11885
gene id: 521674:PLIM_RS11885
uniprot id: D5SNM0
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS17330
gene id: 521674:PLIM_RS17330
uniprot id: D5SUD2
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

521674:PLIM RS11745
gene id: 521674:PLIM_RS11745
uniprot id: D5SNJ1
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

521674:PLIM RS11185
gene id: 521674:PLIM_RS11185
uniprot id: D5SMU4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.
messages: An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.
messages: Belongs to the DTD family.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS18020
gene id: 521674:PLIM_RS18020
uniprot id: D5SV27
names: Similarity
messages: Belongs to the histone deacetylase family.

521674:PLIM RS05850
gene id: 521674:PLIM_RS05850
uniprot id: D5STY2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.

521674:PLIM RS06840
gene id: 521674:PLIM_RS06840
uniprot id: D5SV89
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DNA polymerase type-C family. DnaE2 subfamily.
messages: Cytoplasm
messages: DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.

521674:PLIM RS00425
gene id: 521674:PLIM_RS00425
uniprot id: D5SML5
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS17415
gene id: 521674:PLIM_RS17415
uniprot id: D5SUE7
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS06430
gene id: 521674:PLIM_RS06430
uniprot id: D5SUM6
names: Caution
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the thiamine-monophosphate kinase family.
messages: Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate.

521674:PLIM RS17600
gene id: 521674:PLIM_RS17600
uniprot id: D5SUU8
names: Similarity
messages: Belongs to the asparagine synthetase family.

521674:PLIM RS00335
gene id: 521674:PLIM_RS00335
uniprot id: D5SMJ8
names: Similarity
messages: Belongs to the peptidase M24B family.

521674:PLIM RS09405
gene id: 521674:PLIM_RS09405
uniprot id: D5SYB5
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06475
gene id: 521674:PLIM_RS06475
uniprot id: D5SUN4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoglycerate kinase family.
messages: Cytoplasm
messages: Monomer.

521674:PLIM RS13570
gene id: 521674:PLIM_RS13570
uniprot id: D5SQK2
names: Similarity
messages: Belongs to the protease inhibitor I11 (ecotin) family.

521674:PLIM RS13150
gene id: 521674:PLIM_RS13150
uniprot id: D5SQ04
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TACO1 family.
messages: Cytoplasm

521674:PLIM RS06950
gene id: 521674:PLIM_RS06950
uniprot id: D5SVB1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the queuine tRNA-ribosyltransferase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).
messages: Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1.

521674:PLIM RS07705
gene id: 521674:PLIM_RS07705
uniprot id: D5SW34
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PhoU family.
messages: Cytoplasm
messages: Homodimer.
messages: Plays a role in the regulation of phosphate uptake.

521674:PLIM RS12190
gene id: 521674:PLIM_RS12190
uniprot id: D5SP48
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase group 1 family.
messages: Cell membrane
messages: Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A.

521674:PLIM RS20380
gene id: 521674:PLIM_RS20380
uniprot id: D5SXY2
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS16740
gene id: 521674:PLIM_RS16740
uniprot id: D5STP0
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

521674:PLIM RS02565
gene id: 521674:PLIM_RS02565
uniprot id: D5SQ87
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

521674:PLIM RS04835
gene id: 521674:PLIM_RS04835
uniprot id: D5SSM6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS11155
gene id: 521674:PLIM_RS11155
uniprot id: D5SMT7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
messages: Cytoplasm

521674:PLIM RS06545
gene id: 521674:PLIM_RS06545
uniprot id: D5SUP7
names: Subcellular Location Annotation
messages: Cytoplasm

521674:PLIM RS07370
gene id: 521674:PLIM_RS07370
uniprot id: D5SVI9
names: Similarity
messages: Belongs to the aspartokinase family.

521674:PLIM RS10575
gene id: 521674:PLIM_RS10575
uniprot id: D5SYU3
names: Function
names: Induction
names: Similarity
messages: Acts as a chaperone.
messages: Belongs to the heat shock protein 70 family.
messages: By stress conditions e.g. heat shock.

521674:PLIM RS09960
gene id: 521674:PLIM_RS09960
uniprot id: D5SYM3
names: Similarity
messages: Belongs to the glutamine synthetase family.

521674:PLIM RS02570
gene id: 521674:PLIM_RS02570
uniprot id: D5SQ88
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

521674:PLIM RS17405
gene id: 521674:PLIM_RS17405
uniprot id: D5SUE6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS20315
gene id: 521674:PLIM_RS20315
uniprot id: D5SXX3
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

521674:PLIM RS00880
gene id: 521674:PLIM_RS00880
uniprot id: D5SN99
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.

521674:PLIM RS16890
gene id: 521674:PLIM_RS16890
uniprot id: D5SU46
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS13205
gene id: 521674:PLIM_RS13205
uniprot id: D5SQ15
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

521674:PLIM RS15305
gene id: 521674:PLIM_RS15305
uniprot id: D5SS74
names: Similarity
messages: Belongs to the intimin/invasin family.

521674:PLIM RS02325
gene id: 521674:PLIM_RS02325
uniprot id: D5SPR2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

521674:PLIM RS02905
gene id: 521674:PLIM_RS02905
uniprot id: D5SQE1
names: Similarity
messages: Belongs to the YciI family.

521674:PLIM RS07760
gene id: 521674:PLIM_RS07760
uniprot id: D5SW45
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS05275
gene id: 521674:PLIM_RS05275
uniprot id: D5ST96
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS11385
gene id: 521674:PLIM_RS11385
uniprot id: D5SMY3
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS03315
gene id: 521674:PLIM_RS03315
uniprot id: D5SR00
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).

521674:PLIM RS08665
gene id: 521674:PLIM_RS08665
uniprot id: D5SX01
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

521674:PLIM RS00510
gene id: 521674:PLIM_RS00510
uniprot id: D5SN23
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the radical SAM superfamily. MqnE family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.

521674:PLIM RS21380
gene id: 521674:PLIM_RS21380
uniprot id: D5SZ72
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the argininosuccinate synthase family. Type 1 subfamily.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS19870
gene id: 521674:PLIM_RS19870
uniprot id: D5SX55
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS19465
gene id: 521674:PLIM_RS19465
uniprot id: D5SWK2
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS22530
gene id: 521674:PLIM_RS22530
uniprot id: D5STY9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GTP-binding SRP family.
messages: Cell membrane
messages: Membrane
messages: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum.

521674:PLIM RS12475
gene id: 521674:PLIM_RS12475
uniprot id: D5SPA2
names: Similarity
messages: Belongs to the PEP-utilizing enzyme family.

521674:PLIM RS13380
gene id: 521674:PLIM_RS13380
uniprot id: D5SQ52
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enolase family.
messages: Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
messages: Cell surface
messages: Cytoplasm
messages: Secreted
messages: The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.

521674:PLIM RS08870
gene id: 521674:PLIM_RS08870
uniprot id: D5SXH3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
messages: Cell inner membrane
messages: Interacts with the Sec translocase complex via SecD. Specifically interacts with transmembrane segments of nascent integral membrane proteins during membrane integration.
messages: Membrane
messages: Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.

521674:PLIM RS08465
gene id: 521674:PLIM_RS08465
uniprot id: D5SWW3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PanB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.
messages: Cytoplasm
messages: Homodecamer; pentamer of dimers.

521674:PLIM RS12750
gene id: 521674:PLIM_RS12750
uniprot id: D5SPS7
names: Similarity
messages: Belongs to the Dps family.

521674:PLIM RS18565
gene id: 521674:PLIM_RS18565
uniprot id: D5SVR6
names: Similarity
messages: Belongs to the cytidine and deoxycytidylate deaminase family.

521674:PLIM RS12310
gene id: 521674:PLIM_RS12310
uniprot id: D5SP72
names: Similarity
messages: Belongs to the UPF0051 (ycf24) family.

521674:PLIM RS00990
gene id: 521674:PLIM_RS00990
uniprot id: D5SNB9
names: Function
names: Similarity
messages: Belongs to the NadC/ModD family.
messages: Involved in the catabolism of quinolinic acid (QA).

521674:PLIM RS00420
gene id: 521674:PLIM_RS00420
uniprot id: D5SML4
names: Function
names: Similarity
messages: Belongs to the NadD family.
messages: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).

521674:PLIM RS00345
gene id: 521674:PLIM_RS00345
uniprot id: D5SMK0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: Cell inner membrane
messages: Homohexamer.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the central section; belongs to the AAA ATPase family.

521674:PLIM RS13335
gene id: 521674:PLIM_RS13335
uniprot id: D5SQ43
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

521674:PLIM RS14415
gene id: 521674:PLIM_RS14415
uniprot id: D5SRD4
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

521674:PLIM RS02535
gene id: 521674:PLIM_RS02535
uniprot id: D5SQ81
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

521674:PLIM RS15910
gene id: 521674:PLIM_RS15910
uniprot id: D5SSW3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliJ family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS13040
gene id: 521674:PLIM_RS13040
uniprot id: D5SPY3
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01375
gene id: 521674:PLIM_RS01375
uniprot id: D5SNW7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell inner membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS06990
gene id: 521674:PLIM_RS06990
uniprot id: D5SVB9
names: Function
names: Similarity
messages: Belongs to the UxaE family.
messages: Catalyzes the epimerization of D-tagaturonate (D-TagA) to D-fructuronate (D-FruA).

521674:PLIM RS18175
gene id: 521674:PLIM_RS18175
uniprot id: D5SV60
names: Similarity
messages: Belongs to the 2-oxoacid dehydrogenase family.

521674:PLIM RS09980
gene id: 521674:PLIM_RS09980
uniprot id: D5SXR8
names: Function
names: Similarity
messages: Belongs to the DHPS family.
messages: Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives.

521674:PLIM RS17560
gene id: 521674:PLIM_RS17560
uniprot id: D5SUH4
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
messages: Homodimer.

521674:PLIM RS06345
gene id: 521674:PLIM_RS06345
uniprot id: D5SUK9
names: Similarity
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family.

521674:PLIM RS18345
gene id: 521674:PLIM_RS18345
uniprot id: D5SVM0
names: Cofactor
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.

521674:PLIM RS18055
gene id: 521674:PLIM_RS18055
uniprot id: D5SV35
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IMPDH/GMPR family.
messages: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH.

521674:PLIM RS18575
gene id: 521674:PLIM_RS18575
uniprot id: D5SVR8
names: Similarity
messages: Belongs to the CinA family.

521674:PLIM RS02310
gene id: 521674:PLIM_RS02310
uniprot id: D5SPQ9
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

521674:PLIM RS15175
gene id: 521674:PLIM_RS15175
uniprot id: D5SS51
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS22835
gene id: 521674:PLIM_RS22835
uniprot id: D5SMN2
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS16330
gene id: 521674:PLIM_RS16330
uniprot id: D5STG2
names: Function
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase class-2 family.
messages: Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.

521674:PLIM RS08830
gene id: 521674:PLIM_RS08830
uniprot id: D5SXG5
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the chorismate synthase family.
messages: Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Reduced FMN (FMNH(2)).

521674:PLIM RS07290
gene id: 521674:PLIM_RS07290
uniprot id: D5SVH3
names: Similarity
messages: Belongs to the phosphohexose mutase family.

521674:PLIM RS10725
gene id: 521674:PLIM_RS10725
uniprot id: D5SYX4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0126 family.
messages: Membrane

521674:PLIM RS06400
gene id: 521674:PLIM_RS06400
uniprot id: D5SUM1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.
messages: Cytoplasm
messages: Monomer.

521674:PLIM RS12315
gene id: 521674:PLIM_RS12315
uniprot id: D5SP73
names: Similarity
messages: Belongs to the UPF0051 (ycf24) family.

521674:PLIM RS08900
gene id: 521674:PLIM_RS08900
uniprot id: D5SXH9
names: Activity Regulation
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.
messages: Belongs to the CTP synthase family.
messages: CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS02610
gene id: 521674:PLIM_RS02610
uniprot id: D5SQ96
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

521674:PLIM RS11480
gene id: 521674:PLIM_RS11480
uniprot id: D5SNE1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
messages: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
messages: Monomer.

521674:PLIM RS11290
gene id: 521674:PLIM_RS11290
uniprot id: D5SMW6
names: Similarity
messages: Belongs to the TrpC family.

521674:PLIM RS01705
gene id: 521674:PLIM_RS01705
uniprot id: D5SP27
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytidylate kinase family. Type 1 subfamily.
messages: Cytoplasm

521674:PLIM RS16965
gene id: 521674:PLIM_RS16965
uniprot id: D5SU60
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS20465
gene id: 521674:PLIM_RS20465
uniprot id: D5SXZ8
names: Similarity
messages: Belongs to the glycosyl hydrolase 13 family.

521674:PLIM RS08185
gene id: 521674:PLIM_RS08185
uniprot id: D5SWR1
names: Cofactor
messages: Binds 1 zinc ion per subunit.

521674:PLIM RS15895
gene id: 521674:PLIM_RS15895
uniprot id: D5SSW0
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliG family.
messages: Membrane

521674:PLIM RS17545
gene id: 521674:PLIM_RS17545
uniprot id: D5SUH1
names: Caution
names: Function
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.
messages: Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS02575
gene id: 521674:PLIM_RS02575
uniprot id: D5SQ89
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL6 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

521674:PLIM RS16970
gene id: 521674:PLIM_RS16970
uniprot id: D5SU62
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS00885
gene id: 521674:PLIM_RS00885
uniprot id: D5SNA0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.

521674:PLIM RS11710
gene id: 521674:PLIM_RS11710
uniprot id: D5SNI4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS16405
gene id: 521674:PLIM_RS16405
uniprot id: D5STH7
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UMP kinase family.
messages: Catalyzes the reversible phosphorylation of UMP to UDP.
messages: Cytoplasm
messages: Homohexamer.
messages: Inhibited by UTP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS18570
gene id: 521674:PLIM_RS18570
uniprot id: D5SVR7
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adenosylhomocysteinase family.
messages: Binds 1 NAD(+) per subunit.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.

521674:PLIM RS00905
gene id: 521674:PLIM_RS00905
uniprot id: D5SNA4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase TrmD family.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Specifically methylates guanosine-37 in various tRNAs.

521674:PLIM RS04510
gene id: 521674:PLIM_RS04510
uniprot id: D5SSF4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the flotillin-like FloA family.
messages: Cell membrane
messages: Found in functional membrane microdomains (FMM) that may be equivalent to eukaryotic membrane rafts FMMs are highly dynamic and increase in number as cells age. Flotillins are thought to be important factors in membrane fluidity.
messages: Homooligomerizes.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane raft

521674:PLIM RS04530
gene id: 521674:PLIM_RS04530
uniprot id: D5SSF9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein bS6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein bS6.

521674:PLIM RS16090
gene id: 521674:PLIM_RS16090
uniprot id: D5SSZ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

521674:PLIM RS11365
gene id: 521674:PLIM_RS11365
uniprot id: D5SMY0
names: Caution
names: Function
names: Similarity
messages: Belongs to the thymidylate kinase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.

521674:PLIM RS11880
gene id: 521674:PLIM_RS11880
uniprot id: D5SNL9
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS23280
gene id: 521674:PLIM_RS23280
uniprot id: D5SWG3
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS12580
gene id: 521674:PLIM_RS12580
uniprot id: D5SPC4
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

521674:PLIM RS07890
gene id: 521674:PLIM_RS07890
uniprot id: D5SW67
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS01690
gene id: 521674:PLIM_RS01690
uniprot id: D5SP24
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0382 family.
messages: Membrane

521674:PLIM RS21130
gene id: 521674:PLIM_RS21130
uniprot id: D5SZ20
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS02870
gene id: 521674:PLIM_RS02870
uniprot id: D5SQD3
names: Similarity
messages: Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.

521674:PLIM RS02750
gene id: 521674:PLIM_RS02750
uniprot id: D5SQB1
names: Similarity
messages: Belongs to the peptidase S51 family.

521674:PLIM RS04235
gene id: 521674:PLIM_RS04235
uniprot id: D5SRW2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

521674:PLIM RS09340
gene id: 521674:PLIM_RS09340
uniprot id: D5SXR3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the heat shock protein 90 family.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Molecular chaperone. Has ATPase activity.

521674:PLIM RS12400
gene id: 521674:PLIM_RS12400
uniprot id: D5SP88
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the succinate/malate CoA ligase beta subunit family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterotetramer of two alpha and two beta subunits.
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.

521674:PLIM RS00325
gene id: 521674:PLIM_RS00325
uniprot id: D5SMJ6
names: Function
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.

521674:PLIM RS08790
gene id: 521674:PLIM_RS08790
uniprot id: D5SXF7
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.

521674:PLIM RS05295
gene id: 521674:PLIM_RS05295
uniprot id: D5ST99
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CobS family.
messages: Cell inner membrane
messages: Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.
messages: Membrane

521674:PLIM RS10165
gene id: 521674:PLIM_RS10165
uniprot id: D5SXV8
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS21970
gene id: 521674:PLIM_RS21970
uniprot id: D5SZG9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

521674:PLIM RS19715
gene id: 521674:PLIM_RS19715
uniprot id: D5SX22
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transaldolase family. Type 2 subfamily.
messages: Cytoplasm
messages: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

521674:PLIM RS01660
gene id: 521674:PLIM_RS01660
uniprot id: D5SP19
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
messages: Heterodimer of LeuC and LeuD.

521674:PLIM RS11200
gene id: 521674:PLIM_RS11200
uniprot id: D5SMU8
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

521674:PLIM RS07545
gene id: 521674:PLIM_RS07545
uniprot id: D5SW04
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.
messages: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS12870
gene id: 521674:PLIM_RS12870
uniprot id: D5SPU9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.
messages: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys-tRNA(Pro) is not edited by ProRS.
messages: Consists of three domains: the N-terminal catalytic domain, the editing domain and the C-terminal anticodon-binding domain.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS09250
gene id: 521674:PLIM_RS09250
uniprot id: D5SXP7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial microcompartment
messages: Belongs to the EutC family.
messages: Binds between the large and small subunits.
messages: Catalyzes the deamination of various vicinal amino-alcohols to oxo compounds. Allows this organism to utilize ethanolamine as the sole source of nitrogen and carbon in the presence of external vitamin B12.
messages: The basic unit is a heterodimer which dimerizes to form tetramers. The heterotetramers trimerize; 6 large subunits form a core ring with 6 small subunits projecting outwards.

521674:PLIM RS02485
gene id: 521674:PLIM_RS02485
uniprot id: D5SQ71
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

521674:PLIM RS00800
gene id: 521674:PLIM_RS00800
uniprot id: D5SN84
names: Similarity
messages: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily.

521674:PLIM RS12165
gene id: 521674:PLIM_RS12165
uniprot id: D5SP42
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
messages: Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
messages: Homotrimer.

521674:PLIM RS00195
gene id: 521674:PLIM_RS00195
uniprot id: D5SMG9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the beta sliding clamp family.
messages: Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.
messages: Cytoplasm
messages: Forms a ring-shaped head-to-tail homodimer around DNA.

521674:PLIM RS23285
gene id: 521674:PLIM_RS23285
uniprot id: D5SWI2
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06030
gene id: 521674:PLIM_RS06030
uniprot id: D5SU17
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SMC family.
messages: Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.
messages: Cytoplasm
messages: Homodimer.
messages: Required for chromosome condensation and partitioning.

521674:PLIM RS09410
gene id: 521674:PLIM_RS09410
uniprot id: D5SYB6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS12795
gene id: 521674:PLIM_RS12795
uniprot id: D5SPT5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
messages: Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.
messages: Cytoplasm

521674:PLIM RS11830
gene id: 521674:PLIM_RS11830
uniprot id: D5SNK9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the 6-phosphogluconate dehydrogenase family.
messages: Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
messages: Homodimer.

521674:PLIM RS19415
gene id: 521674:PLIM_RS19415
uniprot id: D5SWJ3
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS13275
gene id: 521674:PLIM_RS13275
uniprot id: D5SQ32
names: Similarity
messages: Belongs to the MotB family.

521674:PLIM RS11120
gene id: 521674:PLIM_RS11120
uniprot id: D5SMT0
names: Similarity
messages: Belongs to the peptidase S49 family.

521674:PLIM RS03625
gene id: 521674:PLIM_RS03625
uniprot id: D5SR59
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family. MurF subfamily.
messages: Cytoplasm
messages: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.

521674:PLIM RS20680
gene id: 521674:PLIM_RS20680
uniprot id: D5SY39
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmH family.
messages: Cytoplasm
messages: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.

521674:PLIM RS16165
gene id: 521674:PLIM_RS16165
uniprot id: D5ST11
names: Similarity
messages: In the N-terminal section; belongs to the CRISPR-associated nuclease Cas3-HD family.
messages: In the central section; belongs to the CRISPR-associated helicase Cas3 family.

521674:PLIM RS13210
gene id: 521674:PLIM_RS13210
uniprot id: D5SQ16
names: Similarity
messages: Belongs to the fabD family.

521674:PLIM RS09725
gene id: 521674:PLIM_RS09725
uniprot id: D5SYH8
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS03860
gene id: 521674:PLIM_RS03860
uniprot id: D5SRN7
names: Function
names: Similarity
messages: Belongs to the RecO family.
messages: Involved in DNA repair and RecF pathway recombination.

521674:PLIM RS19560
gene id: 521674:PLIM_RS19560
uniprot id: D5SWM2
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family.

521674:PLIM RS18850
gene id: 521674:PLIM_RS18850
uniprot id: D5SVW9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPase family.
messages: Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
messages: Cytoplasm
messages: Homohexamer.

521674:PLIM RS00680
gene id: 521674:PLIM_RS00680
uniprot id: D5SN60
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

521674:PLIM RS00665
gene id: 521674:PLIM_RS00665
uniprot id: D5SN57
names: Function
names: Similarity
names: Subunit
messages: Belongs to the MoaC family.
messages: Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).
messages: Homohexamer; trimer of dimers.

521674:PLIM RS12955
gene id: 521674:PLIM_RS12955
uniprot id: D5SPW5
names: Similarity
messages: Belongs to the peptidase S41A family.

521674:PLIM RS04195
gene id: 521674:PLIM_RS04195
uniprot id: D5SRV4
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS22805
gene id: 521674:PLIM_RS22805
uniprot id: D5SYV1
names: Similarity
messages: Belongs to the UPF0162 family.

521674:PLIM RS20905
gene id: 521674:PLIM_RS20905
uniprot id: D5SY84
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliQ/MopD/SpaQ family.
messages: Cell membrane
messages: Membrane
messages: Role in flagellar biosynthesis.

521674:PLIM RS13490
gene id: 521674:PLIM_RS13490
uniprot id: D5SQI7
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL9 family.
messages: Binds to the 23S rRNA.

521674:PLIM RS10695
gene id: 521674:PLIM_RS10695
uniprot id: D5SYW8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DedA family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS09455
gene id: 521674:PLIM_RS09455
uniprot id: D5SYC5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.
messages: Belongs to the UppP family.
messages: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS22445
gene id: 521674:PLIM_RS22445
uniprot id: D5SSN1
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS09700
gene id: 521674:PLIM_RS09700
uniprot id: D5SYH3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the KdpA family.
messages: Cell inner membrane
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the periplasmic potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

521674:PLIM RS16470
gene id: 521674:PLIM_RS16470
uniprot id: D5STI7
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the HMBS family.
messages: Binds 1 dipyrromethane group covalently.
messages: Monomer.
messages: Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
messages: The porphobilinogen subunits are added to the dipyrromethane group.

521674:PLIM RS10600
gene id: 521674:PLIM_RS10600
uniprot id: D5SYU8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the guanylate kinase family.
messages: Cytoplasm
messages: Essential for recycling GMP and indirectly, cGMP.

521674:PLIM RS21590
gene id: 521674:PLIM_RS21590
uniprot id: D5SZB1
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS04660
gene id: 521674:PLIM_RS04660
uniprot id: D5SSI9
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

521674:PLIM RS12880
gene id: 521674:PLIM_RS12880
uniprot id: D5SPV0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the gamma-glutamyl phosphate reductase family.
messages: Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
messages: Cytoplasm

521674:PLIM RS12200
gene id: 521674:PLIM_RS12200
uniprot id: D5SP50
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecA family.
messages: Cell inner membrane
messages: Cytoplasm
messages: Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.

521674:PLIM RS11010
gene id: 521674:PLIM_RS11010
uniprot id: D5SMQ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

521674:PLIM RS16285
gene id: 521674:PLIM_RS16285
uniprot id: D5STF5
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS15040
gene id: 521674:PLIM_RS15040
uniprot id: D5SS25
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

521674:PLIM RS21735
gene id: 521674:PLIM_RS21735
uniprot id: D5SN07
names: Similarity
messages: Belongs to the pterin-4-alpha-carbinolamine dehydratase family.

521674:PLIM RS10490
gene id: 521674:PLIM_RS10490
uniprot id: D5SYS7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Homotetramer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

521674:PLIM RS01290
gene id: 521674:PLIM_RS01290
uniprot id: D5SNV1
names: Similarity
messages: Belongs to the UPF0047 family.

521674:PLIM RS02560
gene id: 521674:PLIM_RS02560
uniprot id: D5SQ86
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

521674:PLIM RS10810
gene id: 521674:PLIM_RS10810
uniprot id: D5SYZ1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

521674:PLIM RS21090
gene id: 521674:PLIM_RS21090
uniprot id: D5SZ13
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

521674:PLIM RS14645
gene id: 521674:PLIM_RS14645
uniprot id: D5SRI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS19885
gene id: 521674:PLIM_RS19885
uniprot id: D5SX58
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS09320
gene id: 521674:PLIM_RS09320
uniprot id: D5SXR0
names: Similarity
messages: Belongs to the myo-inositol 1-phosphate synthase family.

521674:PLIM RS13670
gene id: 521674:PLIM_RS13670
uniprot id: D5SQM0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
messages: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

521674:PLIM RS07835
gene id: 521674:PLIM_RS07835
uniprot id: D5SW58
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS02615
gene id: 521674:PLIM_RS02615
uniprot id: D5SQ97
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL17 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L32.

521674:PLIM RS05910
gene id: 521674:PLIM_RS05910
uniprot id: D5STZ3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
messages: Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only aminotransferase known to utilize SAM as an amino donor.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS20910
gene id: 521674:PLIM_RS20910
uniprot id: D5SY85
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliP/MopC/SpaP family.
messages: Cell membrane
messages: Membrane
messages: Plays a role in the flagellum-specific transport system.

521674:PLIM RS15230
gene id: 521674:PLIM_RS15230
uniprot id: D5SS61
names: Similarity
messages: Belongs to the threonine synthase family.

521674:PLIM RS10605
gene id: 521674:PLIM_RS10605
uniprot id: D5SYU9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

521674:PLIM RS22800
gene id: 521674:PLIM_RS22800
uniprot id: D5SYU6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SecG family.
messages: Cell membrane
messages: Involved in protein export. Participates in an early event of protein translocation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

521674:PLIM RS10210
gene id: 521674:PLIM_RS10210
uniprot id: D5SXW7
names: Similarity
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.

521674:PLIM RS19025
gene id: 521674:PLIM_RS19025
uniprot id: D5SWB8
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

521674:PLIM RS08770
gene id: 521674:PLIM_RS08770
uniprot id: D5SXF4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Homotetramer.
messages: Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.

521674:PLIM RS09905
gene id: 521674:PLIM_RS09905
uniprot id: D5SYL3
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CheB family.
messages: Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.
messages: Cytoplasm
messages: Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
messages: Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.

521674:PLIM RS00890
gene id: 521674:PLIM_RS00890
uniprot id: D5SNA1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.

521674:PLIM RS01100
gene id: 521674:PLIM_RS01100
uniprot id: D5SNE0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-2 integral membrane protein family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS13280
gene id: 521674:PLIM_RS13280
uniprot id: D5SQ33
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MotA family.
messages: Membrane

521674:PLIM RS05320
gene id: 521674:PLIM_RS05320
uniprot id: D5STA5
names: Subcellular Location Annotation
messages: Nucleus

521674:PLIM RS15660
gene id: 521674:PLIM_RS15660
uniprot id: D5SSS0
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS15325
gene id: 521674:PLIM_RS15325
uniprot id: D5SS78
names: Function
names: Similarity
messages: Belongs to the ketopantoate reductase family.
messages: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.

521674:PLIM RS00490
gene id: 521674:PLIM_RS00490
uniprot id: D5SN19
names: Function
names: Similarity
names: Subunit
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
messages: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-ketoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).
messages: Homodimer.

521674:PLIM RS09045
gene id: 521674:PLIM_RS09045
uniprot id: D5SXK7
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS09530
gene id: 521674:PLIM_RS09530
uniprot id: D5SYE0
names: Function
names: Similarity
messages: Belongs to the DNA mismatch repair MutL/HexB family.
messages: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.

521674:PLIM RS11990
gene id: 521674:PLIM_RS11990
uniprot id: D5SNP2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PRA-CH family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS10570
gene id: 521674:PLIM_RS10570
uniprot id: D5SYU2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ClpA/ClpB family.
messages: Cytoplasm
messages: Homohexamer. The oligomerization is ATP-dependent.
messages: Homohexamer; The oligomerization is ATP-dependent.
messages: Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE.

521674:PLIM RS13810
gene id: 521674:PLIM_RS13810
uniprot id: D5SQP9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
messages: Membrane

521674:PLIM RS03160
gene id: 521674:PLIM_RS03160
uniprot id: D5SQX5
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M32 family.
messages: Binds 1 zinc ion per subunit.
messages: Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.

521674:PLIM RS12520
gene id: 521674:PLIM_RS12520
uniprot id: D5SPB2
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvB family.
messages: Cytoplasm
messages: Has 3 domains, the large (RuvB-L) and small ATPase (RuvB-S) domains and the C-terminal head (RuvB-H) domain. The head domain binds DNA, while the ATPase domains jointly bind ATP, ADP or are empty depending on the state of the subunit in the translocation cycle. During a single DNA translocation step the structure of each domain remains the same, but their relative positions change.
messages: Homohexamer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time. Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange. Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration. The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration. Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.

521674:PLIM RS06925
gene id: 521674:PLIM_RS06925
uniprot id: D5SVA6
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS06860
gene id: 521674:PLIM_RS06860
uniprot id: D5SV93
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS13555
gene id: 521674:PLIM_RS13555
uniprot id: D5SQJ9
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

521674:PLIM RS19865
gene id: 521674:PLIM_RS19865
uniprot id: D5SX54
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

521674:PLIM RS21410
gene id: 521674:PLIM_RS21410
uniprot id: D5SZ78
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SmpB family.
messages: Cytoplasm
messages: Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.

521674:PLIM RS17170
gene id: 521674:PLIM_RS17170
uniprot id: D5SU98
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Cytoplasm
messages: Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

521674:PLIM RS07850
gene id: 521674:PLIM_RS07850
uniprot id: D5SW61
names: Similarity
messages: Belongs to the tRNA(His) guanylyltransferase family.

521674:PLIM RS19615
gene id: 521674:PLIM_RS19615
uniprot id: D5SWN2
names: Caution
names: Similarity
messages: Belongs to the globin family.
messages: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS08570
gene id: 521674:PLIM_RS08570
uniprot id: D5SWY2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCF family. Uup subfamily.
messages: Cytoplasm
messages: Probably plays a role in ribosome assembly or function. May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps. Binds DNA and has ATPase activity.

521674:PLIM RS07040
gene id: 521674:PLIM_RS07040
uniprot id: D5SVC8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A8 family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: This protein specifically catalyzes the removal of signal peptides from prolipoproteins.

521674:PLIM RS03835
gene id: 521674:PLIM_RS03835
uniprot id: D5SRN4
names: Function
names: Similarity
messages: Belongs to the FGGY kinase family.
messages: Catalyzes the phosphorylation of D-xylulose to D-xylulose 5-phosphate.

521674:PLIM RS06960
gene id: 521674:PLIM_RS06960
uniprot id: D5SVB3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecD/SecF family. SecD subfamily.
messages: Belongs to the SecD/SecF family. SecF subfamily.
messages: Cell inner membrane
messages: Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.
messages: Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.

521674:PLIM RS01700
gene id: 521674:PLIM_RS01700
uniprot id: D5SP26
names: Similarity
messages: Belongs to the peptidase C56 family.

521674:PLIM RS09440
gene id: 521674:PLIM_RS09440
uniprot id: D5SYC2
names: Similarity
messages: Belongs to the inositol monophosphatase superfamily.

521674:PLIM RS02345
gene id: 521674:PLIM_RS02345
uniprot id: D5SPR6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS19855
gene id: 521674:PLIM_RS19855
uniprot id: D5SX52
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.

521674:PLIM RS12885
gene id: 521674:PLIM_RS12885
uniprot id: D5SPV1
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliM family.
messages: Membrane

521674:PLIM RS22140
gene id: 521674:PLIM_RS22140
uniprot id: D5SN28
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YqgF HJR family.
messages: Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
messages: Cytoplasm

521674:PLIM RS07980
gene id: 521674:PLIM_RS07980
uniprot id: D5SW85
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane

521674:PLIM RS22190
gene id: 521674:PLIM_RS22190
uniprot id: D5SN98
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase delta chain family.
messages: Cell inner membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.

521674:PLIM RS06750
gene id: 521674:PLIM_RS06750
uniprot id: D5SUT9
names: Similarity
messages: Belongs to the transferase hexapeptide repeat family.

521674:PLIM RS00055
gene id: 521674:PLIM_RS00055
uniprot id: D5SME2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the D-alanine--D-alanine ligase family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Cell wall formation.
messages: Cytoplasm

521674:PLIM RS14675
gene id: 521674:PLIM_RS14675
uniprot id: D5SRI6
names: Similarity
messages: Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.

521674:PLIM RS03960
gene id: 521674:PLIM_RS03960
uniprot id: D5SRQ9
names: Cofactor
messages: Binds 1 zinc ion per subunit.

521674:PLIM RS07090
gene id: 521674:PLIM_RS07090
uniprot id: D5SVD8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the helicase family. PriA subfamily.
messages: Component of the primosome.
messages: Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA.

521674:PLIM RS21020
gene id: 521674:PLIM_RS21020
uniprot id: D5SYZ9
names: Cofactor
names: Similarity
messages: Belongs to the WrbA family.
messages: Binds 1 FMN per monomer.

521674:PLIM RS01480
gene id: 521674:PLIM_RS01480
uniprot id: D5SNY8
names: Function
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
messages: Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.

521674:PLIM RS21510
gene id: 521674:PLIM_RS21510
uniprot id: D5SZ94
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TspO/BZRP family.
messages: Membrane

521674:PLIM RS15410
gene id: 521674:PLIM_RS15410
uniprot id: D5SS96
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

521674:PLIM RS19750
gene id: 521674:PLIM_RS19750
uniprot id: D5SX29
names: Similarity
messages: Belongs to the bacterial secretin family.

521674:PLIM RS03955
gene id: 521674:PLIM_RS03955
uniprot id: D5SRQ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

521674:PLIM RS11595
gene id: 521674:PLIM_RS11595
uniprot id: D5SNG4
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS14030
gene id: 521674:PLIM_RS14030
uniprot id: D5SQU0
names: Function
names: Similarity
messages: Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.
messages: Belongs to the Fmt family.

521674:PLIM RS13190
gene id: 521674:PLIM_RS13190
uniprot id: D5SQ12
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.

521674:PLIM RS14525
gene id: 521674:PLIM_RS14525
uniprot id: D5SRF6
names: Function
names: Similarity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L-serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate.

521674:PLIM RS04045
gene id: 521674:PLIM_RS04045
uniprot id: D5SRS5
names: Function
names: Similarity
messages: Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
messages: Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).

521674:PLIM RS16835
gene id: 521674:PLIM_RS16835
uniprot id: D5STR0
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS19200
gene id: 521674:PLIM_RS19200
uniprot id: D5SWF2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS08150
gene id: 521674:PLIM_RS08150
uniprot id: D5SWQ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family.
messages: Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).
messages: Cytoplasm

521674:PLIM RS02600
gene id: 521674:PLIM_RS02600
uniprot id: D5SQ94
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

521674:PLIM RS17125
gene id: 521674:PLIM_RS17125
uniprot id: D5SU90
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS14045
gene id: 521674:PLIM_RS14045
uniprot id: D5SQU3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Heptamer of 7 subunits arranged in a ring.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

521674:PLIM RS06650
gene id: 521674:PLIM_RS06650
uniprot id: D5SUR9
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the xylose isomerase family.
messages: Binds 2 magnesium ions per subunit.
messages: Cytoplasm
messages: Homotetramer.

521674:PLIM RS18775
gene id: 521674:PLIM_RS18775
uniprot id: D5SVV4
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01185
gene id: 521674:PLIM_RS01185
uniprot id: D5SNT0
names: Similarity
messages: Belongs to the SufE family.

521674:PLIM RS13855
gene id: 521674:PLIM_RS13855
uniprot id: D5SQQ5
names: Similarity
messages: Belongs to the glutamate synthase family.

521674:PLIM RS08550
gene id: 521674:PLIM_RS08550
uniprot id: D5SWX8
names: Similarity
messages: Belongs to the UPF0178 family.

521674:PLIM RS12645
gene id: 521674:PLIM_RS12645
uniprot id: D5SPD7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvT family.
messages: The glycine cleavage system catalyzes the degradation of glycine.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

521674:PLIM RS10410
gene id: 521674:PLIM_RS10410
uniprot id: D5SYR1
names: Similarity
messages: Belongs to the peptidase S1C family.

521674:PLIM RS09940
gene id: 521674:PLIM_RS09940
uniprot id: D5SYL9
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS00785
gene id: 521674:PLIM_RS00785
uniprot id: D5SN81
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS19890
gene id: 521674:PLIM_RS19890
uniprot id: D5SX59
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Membrane

521674:PLIM RS22450
gene id: 521674:PLIM_RS22450
uniprot id: D5ST31
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01370
gene id: 521674:PLIM_RS01370
uniprot id: D5SNW6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Membrane

521674:PLIM RS04040
gene id: 521674:PLIM_RS04040
uniprot id: D5SRS4
names: Caution
names: Function
names: Similarity
messages: Belongs to the ATP:guanido phosphotransferase family.
messages: Catalyzes the specific phosphorylation of arginine residues in proteins.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS08035
gene id: 521674:PLIM_RS08035
uniprot id: D5SW97
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily.

521674:PLIM RS08695
gene id: 521674:PLIM_RS08695
uniprot id: D5SX08
names: Similarity
messages: Belongs to the peptidase C56 family.

521674:PLIM RS21305
gene id: 521674:PLIM_RS21305
uniprot id: D5SZ53
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PyrK family.
messages: Binds 1 FAD per subunit.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Heterotetramer of 2 PyrK and 2 PyrD type B subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).

521674:PLIM RS00135
gene id: 521674:PLIM_RS00135
uniprot id: D5SMF7
names: Similarity
messages: Belongs to the SUI1 family.

521674:PLIM RS08805
gene id: 521674:PLIM_RS08805
uniprot id: D5SXG0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

521674:PLIM RS11735
gene id: 521674:PLIM_RS11735
uniprot id: D5SNI9
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the GTP cyclohydrolase II family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
messages: Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
messages: In the N-terminal section; belongs to the DHBP synthase family.

521674:PLIM RS18185
gene id: 521674:PLIM_RS18185
uniprot id: D5SV62
names: Similarity
messages: Belongs to the AHA1 family.

521674:PLIM RS00305
gene id: 521674:PLIM_RS00305
uniprot id: D5SMJ1
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06865
gene id: 521674:PLIM_RS06865
uniprot id: D5SV94
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 30 kDa subunit family.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS00915
gene id: 521674:PLIM_RS00915
uniprot id: D5SNA6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY.
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.

521674:PLIM RS02925
gene id: 521674:PLIM_RS02925
uniprot id: D5SQE5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.

521674:PLIM RS15295
gene id: 521674:PLIM_RS15295
uniprot id: D5SS73
names: Similarity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.

521674:PLIM RS10710
gene id: 521674:PLIM_RS10710
uniprot id: D5SYX1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate.
messages: Cytoplasm
messages: Homotetramer.

521674:PLIM RS09105
gene id: 521674:PLIM_RS09105
uniprot id: D5SXL9
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

521674:PLIM RS00355
gene id: 521674:PLIM_RS00355
uniprot id: D5SMK2
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS24545
gene id: 521674:PLIM_RS24545
uniprot id: D5SYG6
names: Similarity
messages: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.

521674:PLIM RS08255
gene id: 521674:PLIM_RS08255
uniprot id: D5SWS2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ArgJ family.
messages: Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.
messages: Cytoplasm
messages: Heterotetramer of two alpha and two beta chains.
messages: Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway.

521674:PLIM RS13170
gene id: 521674:PLIM_RS13170
uniprot id: D5SQ08
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.

521674:PLIM RS07470
gene id: 521674:PLIM_RS07470
uniprot id: D5SVZ0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endonuclease Cas1 family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas2 homodimer.

521674:PLIM RS02545
gene id: 521674:PLIM_RS02545
uniprot id: D5SQ83
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS17 family.
messages: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
messages: Part of the 30S ribosomal subunit.

521674:PLIM RS03375
gene id: 521674:PLIM_RS03375
uniprot id: D5SR12
names: Similarity
messages: Belongs to the bacterial sugar transferase family.

521674:PLIM RS11705
gene id: 521674:PLIM_RS11705
uniprot id: D5SNI3
names: Similarity
messages: Belongs to the peptidase A24 family.

521674:PLIM RS08615
gene id: 521674:PLIM_RS08615
uniprot id: D5SWZ1
names: Function
names: Similarity
messages: ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.

521674:PLIM RS16990
gene id: 521674:PLIM_RS16990
uniprot id: D5SU66
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

521674:PLIM RS19270
gene id: 521674:PLIM_RS19270
uniprot id: D5SWG6
names: Similarity
messages: Belongs to the FKBP-type PPIase family.

521674:PLIM RS08090
gene id: 521674:PLIM_RS08090
uniprot id: D5SWP2
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IPP transferase family.
messages: Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

521674:PLIM RS07195
gene id: 521674:PLIM_RS07195
uniprot id: D5SVF5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type III secretion exporter family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.

521674:PLIM RS18780
gene id: 521674:PLIM_RS18780
uniprot id: D5SVV5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS07725
gene id: 521674:PLIM_RS07725
uniprot id: D5SW38
names: Function
names: Similarity
messages: Belongs to the PstS family.
messages: Involved in the system for phosphate transport across the cytoplasmic membrane.

521674:PLIM RS03690
gene id: 521674:PLIM_RS03690
uniprot id: D5SRK7
names: Function
names: Similarity
messages: Belongs to the RecR family.
messages: May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.

521674:PLIM RS10120
gene id: 521674:PLIM_RS10120
uniprot id: D5SXU8
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M3 family.
messages: Binds 1 zinc ion.

521674:PLIM RS13805
gene id: 521674:PLIM_RS13805
uniprot id: D5SQP8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome ubiquinol oxidase subunit 2 family.
messages: Membrane

521674:PLIM RS11300
gene id: 521674:PLIM_RS11300
uniprot id: D5SMW8
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.

521674:PLIM RS06105
gene id: 521674:PLIM_RS06105
uniprot id: D5SU32
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS04395
gene id: 521674:PLIM_RS04395
uniprot id: D5SSD3
names: Similarity
messages: Belongs to the DegT/DnrJ/EryC1 family.

521674:PLIM RS12380
gene id: 521674:PLIM_RS12380
uniprot id: D5SP84
names: Function
names: PTM
names: Similarity
messages: An intermediate of this reaction is the autophosphorylated ppk in which a phosphate is covalently linked to a histidine residue through a N-P bond.
messages: Belongs to the polyphosphate kinase 1 (PPK1) family.
messages: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).

521674:PLIM RS13220
gene id: 521674:PLIM_RS13220
uniprot id: D5SQ19
names: Similarity
messages: Belongs to the oxoprolinase family.

521674:PLIM RS10585
gene id: 521674:PLIM_RS10585
uniprot id: D5SYU5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the triosephosphate isomerase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P).

521674:PLIM RS07410
gene id: 521674:PLIM_RS07410
uniprot id: D5SVJ6
names: Similarity
messages: Belongs to the UPF0301 (AlgH) family.

521674:PLIM RS13910
gene id: 521674:PLIM_RS13910
uniprot id: D5SQR5
names: Subcellular Location Annotation
messages: Periplasm

521674:PLIM RS18930
gene id: 521674:PLIM_RS18930
uniprot id: D5SVY4
names: Similarity
messages: Belongs to the flagella basal body rod proteins family.

521674:PLIM RS00910
gene id: 521674:PLIM_RS00910
uniprot id: D5SNA5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS16 family.

521674:PLIM RS06440
gene id: 521674:PLIM_RS06440
uniprot id: D5SUM8
names: Similarity
messages: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.

521674:PLIM RS14890
gene id: 521674:PLIM_RS14890
uniprot id: D5SRZ5
names: Similarity
messages: Belongs to the ParB family.

521674:PLIM RS13915
gene id: 521674:PLIM_RS13915
uniprot id: D5SQR6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body
messages: Belongs to the FlgH family.

521674:PLIM RS19835
gene id: 521674:PLIM_RS19835
uniprot id: D5SX48
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 30 kDa subunit family.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS22610
gene id: 521674:PLIM_RS22610
uniprot id: D5SVE9
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS05885
gene id: 521674:PLIM_RS05885
uniprot id: D5STY8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
messages: Cell membrane
messages: Membrane
messages: Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.

521674:PLIM RS07650
gene id: 521674:PLIM_RS07650
uniprot id: D5SW23
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS13295
gene id: 521674:PLIM_RS13295
uniprot id: D5SQ36
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCH family.
messages: Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT.
messages: Cytoplasm

521674:PLIM RS13230
gene id: 521674:PLIM_RS13230
uniprot id: D5SQ21
names: Function
names: Similarity
messages: Belongs to the beta-class carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.

521674:PLIM RS16400
gene id: 521674:PLIM_RS16400
uniprot id: D5STH6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TrpB family.
messages: Tetramer of two alpha and two beta chains.
messages: The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.

521674:PLIM RS12215
gene id: 521674:PLIM_RS12215
uniprot id: D5SP52
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

521674:PLIM RS08875
gene id: 521674:PLIM_RS08875
uniprot id: D5SXH4
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

521674:PLIM RS13890
gene id: 521674:PLIM_RS13890
uniprot id: D5SQR1
names: Similarity
messages: Belongs to the glycosyl hydrolase 13 family.

521674:PLIM RS13465
gene id: 521674:PLIM_RS13465
uniprot id: D5SQI2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cytoplasm
messages: Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.
messages: Forms polymers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS12575
gene id: 521674:PLIM_RS12575
uniprot id: D5SPC3
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

521674:PLIM RS05980
gene id: 521674:PLIM_RS05980
uniprot id: D5SU07
names: Similarity
messages: Belongs to the protease inhibitor I39 (alpha-2-macroglobulin) family. Bacterial alpha-2-macroglobulin subfamily.

521674:PLIM RS11315
gene id: 521674:PLIM_RS11315
uniprot id: D5SMX1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type IA topoisomerase family.
messages: Monomer.
messages: Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.

521674:PLIM RS23260
gene id: 521674:PLIM_RS23260
uniprot id: D5SVU1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP K family.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS04295
gene id: 521674:PLIM_RS04295
uniprot id: D5SSB0
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS18430
gene id: 521674:PLIM_RS18430
uniprot id: D5SVN8
names: Similarity
messages: Belongs to the heat shock protein 70 family.

521674:PLIM RS01630
gene id: 521674:PLIM_RS01630
uniprot id: D5SP12
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS24525
gene id: 521674:PLIM_RS24525
uniprot id: D5SSG1
names: Similarity
messages: Belongs to the MoaD family.

521674:PLIM RS01030
gene id: 521674:PLIM_RS01030
uniprot id: D5SNC6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS18225
gene id: 521674:PLIM_RS18225
uniprot id: D5SV69
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS19215
gene id: 521674:PLIM_RS19215
uniprot id: D5SWF5
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

521674:PLIM RS15455
gene id: 521674:PLIM_RS15455
uniprot id: D5SSA5
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS15045
gene id: 521674:PLIM_RS15045
uniprot id: D5SS26
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

521674:PLIM RS17930
gene id: 521674:PLIM_RS17930
uniprot id: D5SV11
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

521674:PLIM RS02110
gene id: 521674:PLIM_RS02110
uniprot id: D5SPM7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Membrane

521674:PLIM RS00945
gene id: 521674:PLIM_RS00945
uniprot id: D5SNB1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.
messages: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
messages: Cytoplasm

521674:PLIM RS15925
gene id: 521674:PLIM_RS15925
uniprot id: D5SSW6
names: Similarity
messages: Belongs to the FlgD family.

521674:PLIM RS04800
gene id: 521674:PLIM_RS04800
uniprot id: D5SSL8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic/mitochondrial release factor family.
messages: Cytoplasm
messages: Methylated by PrmC. Methylation increases the termination efficiency of RF1.
messages: Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.

521674:PLIM RS12495
gene id: 521674:PLIM_RS12495
uniprot id: D5SPA7
names: Subunit
messages: Homodimer.

521674:PLIM RS12695
gene id: 521674:PLIM_RS12695
uniprot id: D5SPE7
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01720
gene id: 521674:PLIM_RS01720
uniprot id: D5SP30
names: Caution
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the CarB family.
messages: Binds 4 Mg(2+) or Mn(2+) ions per subunit.
messages: Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS22555
gene id: 521674:PLIM_RS22555
uniprot id: D5SUL2
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

521674:PLIM RS11600
gene id: 521674:PLIM_RS11600
uniprot id: D5SNG5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Lgt family.
messages: Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
messages: Cell inner membrane

521674:PLIM RS07945
gene id: 521674:PLIM_RS07945
uniprot id: D5SW78
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS01215
gene id: 521674:PLIM_RS01215
uniprot id: D5SNT5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

521674:PLIM RS19845
gene id: 521674:PLIM_RS19845
uniprot id: D5SX50
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

521674:PLIM RS08245
gene id: 521674:PLIM_RS08245
uniprot id: D5SWS1
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06165
gene id: 521674:PLIM_RS06165
uniprot id: D5SU43
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ketol-acid reductoisomerase family.
messages: Binds 2 magnesium ions per subunit.
messages: Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS12395
gene id: 521674:PLIM_RS12395
uniprot id: D5SP87
names: Function
names: Similarity
names: Subunit
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Heterotetramer of two alpha and two beta subunits.
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.

521674:PLIM RS06235
gene id: 521674:PLIM_RS06235
uniprot id: D5SUJ0
names: Similarity
messages: Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.

521674:PLIM RS11450
gene id: 521674:PLIM_RS11450
uniprot id: D5SMZ5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit.
messages: Binds 2 divalent ions per subunit.
messages: Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.

521674:PLIM RS01840
gene id: 521674:PLIM_RS01840
uniprot id: D5SPH7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.

521674:PLIM RS10655
gene id: 521674:PLIM_RS10655
uniprot id: D5SYV8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsK/SpoIIIE/SftA family.
messages: Homohexamer. Forms a ring that surrounds DNA.
messages: Membrane

521674:PLIM RS02520
gene id: 521674:PLIM_RS02520
uniprot id: D5SQ78
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

521674:PLIM RS03460
gene id: 521674:PLIM_RS03460
uniprot id: D5SR27
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ribulose-phosphate 3-epimerase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.

521674:PLIM RS17270
gene id: 521674:PLIM_RS17270
uniprot id: D5SUB9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the bacterial flagellin family.
messages: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
messages: Secreted

521674:PLIM RS10155
gene id: 521674:PLIM_RS10155
uniprot id: D5SXV6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS18805
gene id: 521674:PLIM_RS18805
uniprot id: D5SVW0
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.

521674:PLIM RS08020
gene id: 521674:PLIM_RS08020
uniprot id: D5SW94
names: Similarity
names: Subunit
messages: Belongs to the ALAD family.
messages: Homooctamer.

521674:PLIM RS01235
gene id: 521674:PLIM_RS01235
uniprot id: D5SNU0
names: Similarity
messages: Belongs to the thioredoxin family.

521674:PLIM RS11760
gene id: 521674:PLIM_RS11760
uniprot id: D5SNJ4
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatB/GatE family. GatB subfamily.
messages: Heterotrimer of A, B and C subunits.

521674:PLIM RS14230
gene id: 521674:PLIM_RS14230
uniprot id: D5SR99
names: Function
names: Similarity
messages: Belongs to the GHMP kinase family. IspE subfamily.
messages: Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.

521674:PLIM RS14920
gene id: 521674:PLIM_RS14920
uniprot id: D5SS02
names: Similarity
messages: Belongs to the OMP decarboxylase family. Type 2 subfamily.

521674:PLIM RS16825
gene id: 521674:PLIM_RS16825
uniprot id: D5STQ8
names: Similarity
messages: Belongs to the pyruvate kinase family.

521674:PLIM RS14075
gene id: 521674:PLIM_RS14075
uniprot id: D5SQU9
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS03720
gene id: 521674:PLIM_RS03720
uniprot id: D5SRL3
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS03930
gene id: 521674:PLIM_RS03930
uniprot id: D5SRQ2
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS12410
gene id: 521674:PLIM_RS12410
uniprot id: D5SP90
names: Similarity
messages: Belongs to the PTPS family. QueD subfamily.

521674:PLIM RS00870
gene id: 521674:PLIM_RS00870
uniprot id: D5SN97
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Cell inner membrane
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

521674:PLIM RS06695
gene id: 521674:PLIM_RS06695
uniprot id: D5SUS8
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the glutamyl-tRNA reductase family.
messages: Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
messages: During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.
messages: Homodimer.
messages: Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization.

521674:PLIM RS06450
gene id: 521674:PLIM_RS06450
uniprot id: D5SUN0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Membrane

521674:PLIM RS02315
gene id: 521674:PLIM_RS02315
uniprot id: D5SPR0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

521674:PLIM RS03360
gene id: 521674:PLIM_RS03360
uniprot id: D5SR09
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS08975
gene id: 521674:PLIM_RS08975
uniprot id: D5SXJ3
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Nucleus

521674:PLIM RS05855
gene id: 521674:PLIM_RS05855
uniprot id: D5STY3
names: Caution
names: Function
names: Similarity
messages: Belongs to the LDH/MDH superfamily. MDH type 2 family.
messages: Catalyzes the reversible oxidation of malate to oxaloacetate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS16845
gene id: 521674:PLIM_RS16845
uniprot id: D5STR2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DapB family.
messages: Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
messages: Cytoplasm
messages: Homotetramer.
messages: Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction.

521674:PLIM RS07655
gene id: 521674:PLIM_RS07655
uniprot id: D5SW24
names: Similarity
messages: Belongs to the SIMIBI class G3E GTPase family. ZNG1 subfamily.

521674:PLIM RS03595
gene id: 521674:PLIM_RS03595
uniprot id: D5SR53
names: Similarity
messages: Belongs to the RecJ family.

521674:PLIM RS13145
gene id: 521674:PLIM_RS13145
uniprot id: D5SQ03
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
messages: Cytoplasm

521674:PLIM RS08835
gene id: 521674:PLIM_RS08835
uniprot id: D5SXG6
names: Similarity
messages: Belongs to the UPF0047 family.

521674:PLIM RS13970
gene id: 521674:PLIM_RS13970
uniprot id: D5SQS8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anion channel-forming bestrophin (TC 1.A.46) family.
messages: Membrane

521674:PLIM RS10115
gene id: 521674:PLIM_RS10115
uniprot id: D5SXU7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Maf family. YceF subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleoside triphosphate pyrophosphatase that hydrolyzes 7-methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.

521674:PLIM RS11770
gene id: 521674:PLIM_RS11770
uniprot id: D5SNJ7
names: Function
names: Similarity
messages: Belongs to the aconitase/IPM isomerase family.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.

521674:PLIM RS07915
gene id: 521674:PLIM_RS07915
uniprot id: D5SW72
names: Similarity
messages: Belongs to the peptidase C56 family.

521674:PLIM RS12705
gene id: 521674:PLIM_RS12705
uniprot id: D5SPE9
names: Domain
names: Function
names: Similarity
messages: Belongs to the vitamin-B12 dependent methionine synthase family.
messages: Catalyzes the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
messages: Modular enzyme with four functionally distinct domains. The isolated Hcy-binding domain catalyzes methyl transfer from free methylcobalamin to homocysteine. The Hcy-binding domain in association with the pterin-binding domain catalyzes the methylation of cob(I)alamin by methyltetrahydrofolate and the methylation of homocysteine. The B12-binding domain binds the cofactor. The AdoMet activation domain binds S-adenosyl-L-methionine. Under aerobic conditions cob(I)alamin can be converted to inactive cob(II)alamin. Reductive methylation by S-adenosyl-L-methionine and flavodoxin regenerates methylcobalamin.

521674:PLIM RS19500
gene id: 521674:PLIM_RS19500
uniprot id: D5SWL0
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.

521674:PLIM RS16640
gene id: 521674:PLIM_RS16640
uniprot id: D5STM1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IlvD/Edd family.
messages: Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.
messages: Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS20150
gene id: 521674:PLIM_RS20150
uniprot id: D5SXB1
names: Similarity
messages: Belongs to the heat shock protein 70 family.

521674:PLIM RS16820
gene id: 521674:PLIM_RS16820
uniprot id: D5STQ7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRF family.
messages: Cytoplasm
messages: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.

521674:PLIM RS17200
gene id: 521674:PLIM_RS17200
uniprot id: D5SUA3
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.

521674:PLIM RS14110
gene id: 521674:PLIM_RS14110
uniprot id: D5SR75
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase PH family.
messages: Homohexameric ring arranged as a trimer of dimers.
messages: Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.

521674:PLIM RS14880
gene id: 521674:PLIM_RS14880
uniprot id: D5SRZ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP G family.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS06365
gene id: 521674:PLIM_RS06365
uniprot id: D5SUL3
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

521674:PLIM RS07360
gene id: 521674:PLIM_RS07360
uniprot id: D5SVI7
names: Domain
names: Similarity
messages: Belongs to the PurH family.
messages: The IMP cyclohydrolase activity resides in the N-terminal region.

521674:PLIM RS02510
gene id: 521674:PLIM_RS02510
uniprot id: D5SQ76
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

521674:PLIM RS07165
gene id: 521674:PLIM_RS07165
uniprot id: D5SVF0
names: Similarity
messages: Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 5 (UDGb) family.

521674:PLIM RS12570
gene id: 521674:PLIM_RS12570
uniprot id: D5SPC2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transketolase family. DXPS subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).
messages: Homodimer.

521674:PLIM RS01650
gene id: 521674:PLIM_RS01650
uniprot id: D5SP17
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LeuD family. LeuD type 1 subfamily.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
messages: Heterodimer of LeuC and LeuD.

521674:PLIM RS19980
gene id: 521674:PLIM_RS19980
uniprot id: D5SX75
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS00480
gene id: 521674:PLIM_RS00480
uniprot id: D5SMM3
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

521674:PLIM RS14220
gene id: 521674:PLIM_RS14220
uniprot id: D5SR97
names: Cofactor
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: May also have succinyldiaminopimelate aminotransferase activity, thus carrying out the corresponding step in lysine biosynthesis.

521674:PLIM RS10015
gene id: 521674:PLIM_RS10015
uniprot id: D5SXS6
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS11470
gene id: 521674:PLIM_RS11470
uniprot id: D5SMZ8
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
messages: Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.

521674:PLIM RS03355
gene id: 521674:PLIM_RS03355
uniprot id: D5SR08
names: Similarity
messages: Belongs to the pirin family.

521674:PLIM RS00320
gene id: 521674:PLIM_RS00320
uniprot id: D5SMJ5
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
messages: Cytoplasm
messages: Homodimer or homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Non-allosteric.

521674:PLIM RS22240
gene id: 521674:PLIM_RS22240
uniprot id: D5SP11
names: Similarity
messages: Belongs to the PspA/IM30 family.

521674:PLIM RS08505
gene id: 521674:PLIM_RS08505
uniprot id: D5SWX1
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS22205
gene id: 521674:PLIM_RS22205
uniprot id: D5SND8
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaG primase family.
messages: Binds 1 zinc ion per monomer.
messages: Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.
messages: Monomer. Interacts with DnaB.
messages: RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.

521674:PLIM RS00550
gene id: 521674:PLIM_RS00550
uniprot id: D5SN32
names: Similarity
messages: Belongs to the type II topoisomerase GyrA/ParC subunit family.

521674:PLIM RS16110
gene id: 521674:PLIM_RS16110
uniprot id: D5ST00
names: Similarity
messages: Belongs to the bacterial sugar transferase family.

521674:PLIM RS16265
gene id: 521674:PLIM_RS16265
uniprot id: D5STF1
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS22095
gene id: 521674:PLIM_RS22095
uniprot id: D5SMF6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS21210
gene id: 521674:PLIM_RS21210
uniprot id: D5SZ35
names: Cofactor
names: Similarity
messages: Belongs to the PTPS family. QueD subfamily.
messages: Binds 1 zinc ion per subunit.

521674:PLIM RS09715
gene id: 521674:PLIM_RS09715
uniprot id: D5SYH6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS10065
gene id: 521674:PLIM_RS10065
uniprot id: D5SXT6
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.
messages: Binds 1 S-adenosyl-L-methionine per subunit.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS22185
gene id: 521674:PLIM_RS22185
uniprot id: D5SN83
names: Function
names: Similarity
messages: Belongs to the LpxK family.
messages: Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).

521674:PLIM RS14815
gene id: 521674:PLIM_RS14815
uniprot id: D5SRY4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS12195
gene id: 521674:PLIM_RS12195
uniprot id: D5SP49
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS04500
gene id: 521674:PLIM_RS04500
uniprot id: D5SSF3
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06905
gene id: 521674:PLIM_RS06905
uniprot id: D5SVA2
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Monomer.

521674:PLIM RS14560
gene id: 521674:PLIM_RS14560
uniprot id: D5SRG4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pyrroline-5-carboxylate reductase family.
messages: Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
messages: Cytoplasm

521674:PLIM RS02285
gene id: 521674:PLIM_RS02285
uniprot id: D5SPQ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

521674:PLIM RS02595
gene id: 521674:PLIM_RS02595
uniprot id: D5SQ93
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecY/SEC61-alpha family.
messages: Cell inner membrane
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Membrane
messages: The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.

521674:PLIM RS09485
gene id: 521674:PLIM_RS09485
uniprot id: D5SYD1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FGAMS family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer. Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.
messages: Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.

521674:PLIM RS20020
gene id: 521674:PLIM_RS20020
uniprot id: D5SX84
names: Similarity
messages: Belongs to the Nudix hydrolase family.

521674:PLIM RS02205
gene id: 521674:PLIM_RS02205
uniprot id: D5SPP4
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS14995
gene id: 521674:PLIM_RS14995
uniprot id: D5SS16
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

521674:PLIM RS00340
gene id: 521674:PLIM_RS00340
uniprot id: D5SMJ9
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS12905
gene id: 521674:PLIM_RS12905
uniprot id: D5SPV6
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

521674:PLIM RS18010
gene id: 521674:PLIM_RS18010
uniprot id: D5SV25
names: Cofactor
names: Function
messages: Binds 2 [4Fe-4S] clusters.
messages: Component of a complex that catalyzes the oxidation of glycolate to glyoxylate.

521674:PLIM RS13905
gene id: 521674:PLIM_RS13905
uniprot id: D5SQR4
names: Similarity
messages: Belongs to the flagella basal body rod proteins family.

521674:PLIM RS09515
gene id: 521674:PLIM_RS09515
uniprot id: D5SYD6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

521674:PLIM RS14010
gene id: 521674:PLIM_RS14010
uniprot id: D5SQT6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatA/E family.
messages: Cell inner membrane
messages: Forms a complex with TatC.
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

521674:PLIM RS11510
gene id: 521674:PLIM_RS11510
uniprot id: D5SNE7
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS20535
gene id: 521674:PLIM_RS20535
uniprot id: D5SY11
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 3 family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS22230
gene id: 521674:PLIM_RS22230
uniprot id: D5SNT2
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS01350
gene id: 521674:PLIM_RS01350
uniprot id: D5SNW2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

521674:PLIM RS09100
gene id: 521674:PLIM_RS09100
uniprot id: D5SXL8
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

521674:PLIM RS02215
gene id: 521674:PLIM_RS02215
uniprot id: D5SPP6
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS14530
gene id: 521674:PLIM_RS14530
uniprot id: D5SRF7
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M48 family.
messages: Binds 1 zinc ion per subunit.

521674:PLIM RS23005
gene id: 521674:PLIM_RS23005
uniprot id: D5SR92
names: Caution
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS16410
gene id: 521674:PLIM_RS16410
uniprot id: D5STH8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
messages: Belongs to the EF-Ts family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS05845
gene id: 521674:PLIM_RS05845
uniprot id: D5STY1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 4 family. MraY subfamily.
messages: Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS22070
gene id: 521674:PLIM_RS22070
uniprot id: D5SMD4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaA family.
messages: Cytoplasm
messages: Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.

521674:PLIM RS20525
gene id: 521674:PLIM_RS20525
uniprot id: D5SY09
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 3 family.
messages: Membrane

521674:PLIM RS16920
gene id: 521674:PLIM_RS16920
uniprot id: D5SU52
names: Function
names: Similarity
messages: Belongs to the dTDP-4-dehydrorhamnose reductase family.
messages: Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.

521674:PLIM RS19895
gene id: 521674:PLIM_RS19895
uniprot id: D5SX60
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell inner membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS02735
gene id: 521674:PLIM_RS02735
uniprot id: D5SQA9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

521674:PLIM RS18140
gene id: 521674:PLIM_RS18140
uniprot id: D5SV54
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MscL family.
messages: Cell inner membrane
messages: Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
messages: Homopentamer.
messages: Membrane

521674:PLIM RS21935
gene id: 521674:PLIM_RS21935
uniprot id: D5SZG2
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

521674:PLIM RS02490
gene id: 521674:PLIM_RS02490
uniprot id: D5SQ72
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.

521674:PLIM RS08410
gene id: 521674:PLIM_RS08410
uniprot id: D5SWV2
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS1 family.
messages: Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.

521674:PLIM RS16035
gene id: 521674:PLIM_RS16035
uniprot id: D5SSY7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.
messages: Homotetramer.

521674:PLIM RS02150
gene id: 521674:PLIM_RS02150
uniprot id: D5SPN3
names: Similarity
messages: Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.

521674:PLIM RS11100
gene id: 521674:PLIM_RS11100
uniprot id: D5SMS5
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the class II fructose-bisphosphate aldolase family.
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.
messages: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.

521674:PLIM RS17790
gene id: 521674:PLIM_RS17790
uniprot id: D5SUY5
names: Similarity
messages: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family.

521674:PLIM RS16720
gene id: 521674:PLIM_RS16720
uniprot id: D5STN7
names: Similarity
messages: Belongs to the FKBP-type PPIase family.

521674:PLIM RS21530
gene id: 521674:PLIM_RS21530
uniprot id: D5SZ98
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
messages: Mediates influx of magnesium ions.
messages: Membrane

521674:PLIM RS19825
gene id: 521674:PLIM_RS19825
uniprot id: D5SX46
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.

521674:PLIM RS19840
gene id: 521674:PLIM_RS19840
uniprot id: D5SX49
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS04365
gene id: 521674:PLIM_RS04365
uniprot id: D5SSC6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PlsY family.
messages: Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
messages: Cell inner membrane
messages: Probably interacts with PlsX.

521674:PLIM RS08740
gene id: 521674:PLIM_RS08740
uniprot id: D5SXE9
names: Similarity
messages: Belongs to the DEAD box helicase family.

521674:PLIM RS19390
gene id: 521674:PLIM_RS19390
uniprot id: D5SWI8
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MsrP family.
messages: Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.
messages: Heterodimer of a catalytic subunit (MsrP) and a heme-binding subunit (MsrQ).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide.
messages: Periplasm

521674:PLIM RS09710
gene id: 521674:PLIM_RS09710
uniprot id: D5SYH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the KdpC family.
messages: Cell inner membrane
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

521674:PLIM RS20310
gene id: 521674:PLIM_RS20310
uniprot id: D5SXX2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod.

521674:PLIM RS06540
gene id: 521674:PLIM_RS06540
uniprot id: D5SUP6
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
messages: In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS13445
gene id: 521674:PLIM_RS13445
uniprot id: D5SQH8
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS13135
gene id: 521674:PLIM_RS13135
uniprot id: D5SQ01
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
messages: Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.
messages: Cytoplasm

521674:PLIM RS04790
gene id: 521674:PLIM_RS04790
uniprot id: D5SSL6
names: Similarity
messages: Belongs to the Skp family.

521674:PLIM RS03985
gene id: 521674:PLIM_RS03985
uniprot id: D5SRR5
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS01465
gene id: 521674:PLIM_RS01465
uniprot id: D5SNY6
names: Similarity
messages: Belongs to the arginase family. Agmatinase subfamily.

521674:PLIM RS10690
gene id: 521674:PLIM_RS10690
uniprot id: D5SYW7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylosuccinate synthetase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.

521674:PLIM RS04895
gene id: 521674:PLIM_RS04895
uniprot id: D5ST19
names: Function
messages: Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.

521674:PLIM RS03535
gene id: 521674:PLIM_RS03535
uniprot id: D5SR41
names: Similarity
messages: Belongs to the peptidase S41A family.

521674:PLIM RS10580
gene id: 521674:PLIM_RS10580
uniprot id: D5SYU4
names: Function
names: Subcellular Location Annotation
messages: Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate.
messages: Cytoplasm

521674:PLIM RS08565
gene id: 521674:PLIM_RS08565
uniprot id: D5SWY1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
messages: Cell inner membrane
messages: Membrane
messages: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons.

521674:PLIM RS03890
gene id: 521674:PLIM_RS03890
uniprot id: D5SRP4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

521674:PLIM RS13770
gene id: 521674:PLIM_RS13770
uniprot id: D5SQP1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatC family.
messages: Cell inner membrane
messages: Forms a complex with TatA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes.

521674:PLIM RS07800
gene id: 521674:PLIM_RS07800
uniprot id: D5SW52
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS14005
gene id: 521674:PLIM_RS14005
uniprot id: D5SQT5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatA/E family.
messages: Cell inner membrane
messages: Forms a complex with TatC.
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.

521674:PLIM RS14445
gene id: 521674:PLIM_RS14445
uniprot id: D5SRE0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the radical SAM superfamily. MqnC family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).

521674:PLIM RS06200
gene id: 521674:PLIM_RS06200
uniprot id: D5SUI3
names: Caution
names: Function
names: Similarity
messages: Belongs to the glucose-6-phosphate dehydrogenase family.
messages: Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS22965
gene id: 521674:PLIM_RS22965
uniprot id: D5SQL3
names: Similarity
messages: Belongs to the type-I restriction system S methylase family.

521674:PLIM RS02530
gene id: 521674:PLIM_RS02530
uniprot id: D5SQ80
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
messages: Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

521674:PLIM RS09155
gene id: 521674:PLIM_RS09155
uniprot id: D5SXM9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Monomer.
messages: Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.

521674:PLIM RS00895
gene id: 521674:PLIM_RS00895
uniprot id: D5SNA2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase epsilon chain family.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

521674:PLIM RS09830
gene id: 521674:PLIM_RS09830
uniprot id: D5SYJ9
names: Function
names: Similarity
messages: Belongs to the glycosyltransferase 104 family.
messages: Protein-arginine rhamnosyltransferase that catalyzes the transfer of a single rhamnose to elongation factor P (EF-P) on 'Lys-32', a modification required for EF-P-dependent rescue of polyproline stalled ribosomes.

521674:PLIM RS09540
gene id: 521674:PLIM_RS09540
uniprot id: D5SYE2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the shikimate kinase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
messages: Cytoplasm
messages: Monomer.

521674:PLIM RS01965
gene id: 521674:PLIM_RS01965
uniprot id: D5SPK1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polyribonucleotide nucleotidyltransferase family.
messages: Cytoplasm
messages: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.

521674:PLIM RS06795
gene id: 521674:PLIM_RS06795
uniprot id: D5SV80
names: Similarity
messages: Belongs to the phosphohexose mutase family.

521674:PLIM RS07295
gene id: 521674:PLIM_RS07295
uniprot id: D5SVH4
names: Similarity
messages: Belongs to the disproportionating enzyme family.

521674:PLIM RS07785
gene id: 521674:PLIM_RS07785
uniprot id: D5SW49
names: Similarity
messages: Belongs to the heat shock protein 70 family.

521674:PLIM RS02330
gene id: 521674:PLIM_RS02330
uniprot id: D5SPR3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

521674:PLIM RS12550
gene id: 521674:PLIM_RS12550
uniprot id: D5SPB8
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01025
gene id: 521674:PLIM_RS01025
uniprot id: D5SNC5
names: Similarity
messages: Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family.

521674:PLIM RS06295
gene id: 521674:PLIM_RS06295
uniprot id: D5SUK0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HsdR family.
messages: Subunit R is required for both nuclease and ATPase activities, but not for modification.
messages: The type I restriction/modification system is composed of three polypeptides R, M and S.

521674:PLIM RS01605
gene id: 521674:PLIM_RS01605
uniprot id: D5SP07
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

521674:PLIM RS17775
gene id: 521674:PLIM_RS17775
uniprot id: D5SUY2
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspH family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.

521674:PLIM RS14085
gene id: 521674:PLIM_RS14085
uniprot id: D5SQV1
names: Similarity
messages: Belongs to the carotenoid/retinoid oxidoreductase family.

521674:PLIM RS18015
gene id: 521674:PLIM_RS18015
uniprot id: D5SV26
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS02130
gene id: 521674:PLIM_RS02130
uniprot id: D5SPN0
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS20065
gene id: 521674:PLIM_RS20065
uniprot id: D5SX94
names: Similarity
messages: Belongs to the Cob(I)alamin adenosyltransferase family.

521674:PLIM RS02525
gene id: 521674:PLIM_RS02525
uniprot id: D5SQ79
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.

521674:PLIM RS11075
gene id: 521674:PLIM_RS11075
uniprot id: D5SMS0
names: Caution
names: Function
names: Similarity
messages: Belongs to the UbiX/PAD1 family.
messages: Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS00860
gene id: 521674:PLIM_RS00860
uniprot id: D5SN95
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase A chain family.
messages: Cell inner membrane
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
messages: Membrane

521674:PLIM RS16260
gene id: 521674:PLIM_RS16260
uniprot id: D5STF0
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06635
gene id: 521674:PLIM_RS06635
uniprot id: D5SUR5
names: Similarity
messages: Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.

521674:PLIM RS06720
gene id: 521674:PLIM_RS06720
uniprot id: D5SUT3
names: Similarity
messages: Belongs to the nitroreductase family.

521674:PLIM RS13950
gene id: 521674:PLIM_RS13950
uniprot id: D5SQS4
names: Function
names: Similarity
messages: Belongs to the proline racemase family.
messages: Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha-ketoglutarate. Displays no proline racemase activity.

521674:PLIM RS09290
gene id: 521674:PLIM_RS09290
uniprot id: D5SXQ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the QueA family.
messages: Cytoplasm
messages: Monomer.
messages: Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).

521674:PLIM RS14990
gene id: 521674:PLIM_RS14990
uniprot id: D5SS15
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS02965
gene id: 521674:PLIM_RS02965
uniprot id: D5SQF4
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

521674:PLIM RS11640
gene id: 521674:PLIM_RS11640
uniprot id: D5SNH1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Cytoplasm
messages: Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.

521674:PLIM RS20540
gene id: 521674:PLIM_RS20540
uniprot id: D5SY12
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GPI family.
messages: Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.
messages: Cytoplasm

521674:PLIM RS18810
gene id: 521674:PLIM_RS18810
uniprot id: D5SVW1
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS11695
gene id: 521674:PLIM_RS11695
uniprot id: D5SNI1
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS19545
gene id: 521674:PLIM_RS19545
uniprot id: D5SWL9
names: Cofactor
messages: Binds 2 Zn(2+) ions per subunit.

521674:PLIM RS11655
gene id: 521674:PLIM_RS11655
uniprot id: D5SNH4
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

521674:PLIM RS03630
gene id: 521674:PLIM_RS03630
uniprot id: D5SR60
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family. MurE subfamily.
messages: Carboxylation is probably crucial for Mg(2+) binding and, consequently, for the gamma-phosphate positioning of ATP.
messages: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS12505
gene id: 521674:PLIM_RS12505
uniprot id: D5SPA9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Monomer.
messages: Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.

521674:PLIM RS01250
gene id: 521674:PLIM_RS01250
uniprot id: D5SNU3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the polypeptide deformylase family.
messages: Binds 1 Fe(2+) ion.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.

521674:PLIM RS09110
gene id: 521674:PLIM_RS09110
uniprot id: D5SXM0
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial microcompartment
messages: Belongs to the PduL family.
messages: Formed by 2 beta-barrels, each is capped on both ends by short alpha-helices.
messages: Full-length protein forms large oligomers. Possible homotrimer and monomer, when purified in the absence of the encapsulation peptide (EP, residues 1-20). The EP may influence oligomerization.
messages: Part of a bacterial microcompartment (BMC) locus required for growth on plant and algal sugars, including L-fucose and L-rhamnose (PubMed:24487526). Thought to be active on lactyl-CoA in a lactaldehyde-degradation pathway (Probable). CoA is regenerated within the BMC via this enzyme, although there must also be cofactor transport across the BMC. Directly targeted to the BMC (Probable).
messages: There are 2 Zn(2+) ions per monomer; Zn(2+) and CoA bind inbetween the 2 domains in each monomer.

521674:PLIM RS12970
gene id: 521674:PLIM_RS12970
uniprot id: D5SPW9
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS20900
gene id: 521674:PLIM_RS20900
uniprot id: D5SY83
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliR/MopE/SpaR family.
messages: Membrane

521674:PLIM RS07900
gene id: 521674:PLIM_RS07900
uniprot id: D5SW69
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD kinase family.
messages: Cytoplasm
messages: Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS06060
gene id: 521674:PLIM_RS06060
uniprot id: D5SU24
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

521674:PLIM RS16015
gene id: 521674:PLIM_RS16015
uniprot id: D5SSY3
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

521674:PLIM RS13720
gene id: 521674:PLIM_RS13720
uniprot id: D5SQN2
names: Function
names: Similarity
names: Subunit
messages: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer).
messages: Homodimer.
messages: In the C-terminal section; belongs to the MurCDEF family.

521674:PLIM RS02040
gene id: 521674:PLIM_RS02040
uniprot id: D5SPL3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Mrp/NBP35 ATP-binding proteins family.
messages: Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.
messages: Homodimer.
messages: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family.
messages: In the N-terminal section; belongs to the MIP18 family.

521674:PLIM RS17590
gene id: 521674:PLIM_RS17590
uniprot id: D5SUU6
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS05905
gene id: 521674:PLIM_RS05905
uniprot id: D5STZ2
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

521674:PLIM RS11605
gene id: 521674:PLIM_RS11605
uniprot id: D5SNG6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the pantothenate synthetase family.
messages: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.
messages: Cytoplasm
messages: Homodimer.
messages: The reaction proceeds by a bi uni uni bi ping pong mechanism.

521674:PLIM RS05860
gene id: 521674:PLIM_RS05860
uniprot id: D5STY4
names: Function
names: Similarity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Synthesizes alpha-1,4-glucan chains using ADP-glucose.

521674:PLIM RS09210
gene id: 521674:PLIM_RS09210
uniprot id: D5SXP0
names: Similarity
messages: Belongs to the GARS family.

521674:PLIM RS11435
gene id: 521674:PLIM_RS11435
uniprot id: D5SMZ2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. FabH family.
messages: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.
messages: Cytoplasm
messages: Homodimer.
messages: The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH.

521674:PLIM RS01170
gene id: 521674:PLIM_RS01170
uniprot id: D5SNS8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribonuclease III family.
messages: Cytoplasm
messages: Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS22945
gene id: 521674:PLIM_RS22945
uniprot id: D5SQ41
names: Similarity
messages: Belongs to the low molecular weight phosphotyrosine protein phosphatase family.

521674:PLIM RS12370
gene id: 521674:PLIM_RS12370
uniprot id: D5SP82
names: Similarity
messages: Belongs to the LarC family.

521674:PLIM RS23355
gene id: 521674:PLIM_RS23355
uniprot id: D5SXD9
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A monovalent cation. Ammonium or potassium.
messages: Belongs to the type III pantothenate kinase family.
messages: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS15160
gene id: 521674:PLIM_RS15160
uniprot id: D5SS49
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06215
gene id: 521674:PLIM_RS06215
uniprot id: D5SUI6
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by fructose 1,6-bisphosphate (FBP).
messages: Belongs to the LDH/MDH superfamily. LDH family.
messages: Catalyzes the conversion of lactate to pyruvate.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS02580
gene id: 521674:PLIM_RS02580
uniprot id: D5SQ90
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

521674:PLIM RS07235
gene id: 521674:PLIM_RS07235
uniprot id: D5SVG3
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

521674:PLIM RS20530
gene id: 521674:PLIM_RS20530
uniprot id: D5SY10
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01580
gene id: 521674:PLIM_RS01580
uniprot id: D5SP01
names: Similarity
messages: Belongs to the DNA polymerase type-Y family.

521674:PLIM RS13940
gene id: 521674:PLIM_RS13940
uniprot id: D5SQS2
names: Similarity
messages: Belongs to the bacterial flagellin family.

521674:PLIM RS04125
gene id: 521674:PLIM_RS04125
uniprot id: D5SRU1
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06515
gene id: 521674:PLIM_RS06515
uniprot id: D5SUP1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. DeaD/CsdA subfamily.
messages: Cytoplasm
messages: DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.

521674:PLIM RS15090
gene id: 521674:PLIM_RS15090
uniprot id: D5SS34
names: Similarity
messages: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family.

521674:PLIM RS00900
gene id: 521674:PLIM_RS00900
uniprot id: D5SNA3
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

521674:PLIM RS13505
gene id: 521674:PLIM_RS13505
uniprot id: D5SQJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PTH family.
messages: Cytoplasm
messages: Monomer.
messages: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.

521674:PLIM RS00770
gene id: 521674:PLIM_RS00770
uniprot id: D5SN79
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS12600
gene id: 521674:PLIM_RS12600
uniprot id: D5SPC8
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvA family.
messages: Cytoplasm
messages: Has three domains with a flexible linker between the domains II and III and assumes an 'L' shape. Domain III is highly mobile and contacts RuvB.
messages: Homotetramer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.

521674:PLIM RS01760
gene id: 521674:PLIM_RS01760
uniprot id: D5SPG2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

521674:PLIM RS05815
gene id: 521674:PLIM_RS05815
uniprot id: D5STX5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family.
messages: Membrane

521674:PLIM RS07930
gene id: 521674:PLIM_RS07930
uniprot id: D5SW75
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
messages: Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.
messages: Homodimer.

521674:PLIM RS11540
gene id: 521674:PLIM_RS11540
uniprot id: D5SNF3
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DtxR/MntR family.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS18500
gene id: 521674:PLIM_RS18500
uniprot id: D5SVQ3
names: Function
names: Similarity
messages: Belongs to the DMRL synthase family.
messages: Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.

521674:PLIM RS11170
gene id: 521674:PLIM_RS11170
uniprot id: D5SMU1
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the histidinol dehydrogenase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS12205
gene id: 521674:PLIM_RS12205
uniprot id: D5SP51
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS09095
gene id: 521674:PLIM_RS09095
uniprot id: D5SXL7
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the acetokinase family.
messages: Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mg(2+). Can also accept Mn(2+).

521674:PLIM RS09950
gene id: 521674:PLIM_RS09950
uniprot id: D5SYM1
names: Similarity
messages: Belongs to the glycosyl hydrolase 57 family.

521674:PLIM RS11410
gene id: 521674:PLIM_RS11410
uniprot id: D5SMY7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PNP/MTAP phosphorylase family.
messages: Homotrimer.
messages: The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.

521674:PLIM RS10300
gene id: 521674:PLIM_RS10300
uniprot id: D5SYP0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-3 integral membrane protein family.
messages: Cell membrane
messages: Membrane

521674:PLIM RS17840
gene id: 521674:PLIM_RS17840
uniprot id: D5SUZ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
messages: Cell inner membrane
messages: Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.

521674:PLIM RS06910
gene id: 521674:PLIM_RS06910
uniprot id: D5SVA3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Iojap/RsfS family.
messages: Cytoplasm
messages: Functions as a ribosomal silencing factor. Interacts with ribosomal protein uL14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
messages: Interacts with ribosomal protein uL14 (rplN).

521674:PLIM RS12305
gene id: 521674:PLIM_RS12305
uniprot id: D5SP71
names: Similarity
messages: Belongs to the ABC transporter superfamily. Ycf16 family.

521674:PLIM RS20285
gene id: 521674:PLIM_RS20285
uniprot id: D5SXD8
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS01045
gene id: 521674:PLIM_RS01045
uniprot id: D5SND0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 28 family. MurG subfamily.
messages: Cell inner membrane
messages: Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS08000
gene id: 521674:PLIM_RS08000
uniprot id: D5SW90
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RnpA family.
messages: Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit.
messages: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.

521674:PLIM RS15035
gene id: 521674:PLIM_RS15035
uniprot id: D5SS24
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

521674:PLIM RS19710
gene id: 521674:PLIM_RS19710
uniprot id: D5SX21
names: Similarity
messages: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.

521674:PLIM RS18510
gene id: 521674:PLIM_RS18510
uniprot id: D5SVQ6
names: Similarity
messages: Belongs to the phosphohexose mutase family.

521674:PLIM RS04090
gene id: 521674:PLIM_RS04090
uniprot id: D5SRT4
names: Function
names: Similarity
messages: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily.
messages: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.

521674:PLIM RS15550
gene id: 521674:PLIM_RS15550
uniprot id: D5SSP8
names: Similarity
messages: Belongs to the heat shock protein 70 family.

521674:PLIM RS23165
gene id: 521674:PLIM_RS23165
uniprot id: D5SUC6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TerC family.
messages: Membrane

521674:PLIM RS02385
gene id: 521674:PLIM_RS02385
uniprot id: D5SPS4
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS02515
gene id: 521674:PLIM_RS02515
uniprot id: D5SQ77
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

521674:PLIM RS17810
gene id: 521674:PLIM_RS17810
uniprot id: D5SUY8
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 zinc ion.
messages: Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.
messages: In the C-terminal section; belongs to the HTP reductase family.
messages: In the N-terminal section; belongs to the cytidine and deoxycytidylate deaminase family.

521674:PLIM RS07765
gene id: 521674:PLIM_RS07765
uniprot id: D5SW46
names: Similarity
messages: Belongs to the phosphate acetyltransferase and butyryltransferase family.

521674:PLIM RS00995
gene id: 521674:PLIM_RS00995
uniprot id: D5SNC0
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS06665
gene id: 521674:PLIM_RS06665
uniprot id: D5SUS2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial CoaD family.
messages: Cytoplasm
messages: Homohexamer.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

521674:PLIM RS10635
gene id: 521674:PLIM_RS10635
uniprot id: D5SYV5
names: Similarity
messages: Belongs to the KHG/KDPG aldolase family.

521674:PLIM RS03570
gene id: 521674:PLIM_RS03570
uniprot id: D5SR48
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Membrane

521674:PLIM RS13200
gene id: 521674:PLIM_RS13200
uniprot id: D5SQ14
names: Function
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.

521674:PLIM RS02480
gene id: 521674:PLIM_RS02480
uniprot id: D5SQ70
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

521674:PLIM RS17945
gene id: 521674:PLIM_RS17945
uniprot id: D5SV13
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

521674:PLIM RS09220
gene id: 521674:PLIM_RS09220
uniprot id: D5SXP2
names: Similarity
messages: Belongs to the heat shock protein 90 family.

521674:PLIM RS13935
gene id: 521674:PLIM_RS13935
uniprot id: D5SQS0
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the flagella basal body rod proteins family.
messages: Secreted

521674:PLIM RS01590
gene id: 521674:PLIM_RS01590
uniprot id: D5SP04
names: Function
names: Similarity
messages: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily.
messages: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.

521674:PLIM RS04420
gene id: 521674:PLIM_RS04420
uniprot id: D5SSD7
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the tRNA pseudouridine synthase TruA family.
messages: Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS20515
gene id: 521674:PLIM_RS20515
uniprot id: D5SY07
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 2 family.
messages: Membrane

521674:PLIM RS17010
gene id: 521674:PLIM_RS17010
uniprot id: D5SU69
names: Cofactor
names: Miscellaneous
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: The active site is a redox-active disulfide bond.

521674:PLIM RS10195
gene id: 521674:PLIM_RS10195
uniprot id: D5SXW4
names: Similarity
messages: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.

521674:PLIM RS09635
gene id: 521674:PLIM_RS09635
uniprot id: D5SYF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SUA5 family.
messages: Cytoplasm
messages: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.

521674:PLIM RS00460
gene id: 521674:PLIM_RS00460
uniprot id: D5SMM0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

521674:PLIM RS08425
gene id: 521674:PLIM_RS08425
uniprot id: D5SWV5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: Cell inner membrane
messages: Homohexamer.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the central section; belongs to the AAA ATPase family.

521674:PLIM RS01855
gene id: 521674:PLIM_RS01855
uniprot id: D5SPI0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PEP-utilizing enzyme family.
messages: Cytoplasm
messages: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).

521674:PLIM RS12005
gene id: 521674:PLIM_RS12005
uniprot id: D5SNP5
names: Similarity
messages: Belongs to the heat shock protein 70 family.

521674:PLIM RS16095
gene id: 521674:PLIM_RS16095
uniprot id: D5SSZ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

521674:PLIM RS16840
gene id: 521674:PLIM_RS16840
uniprot id: D5STR1
names: Caution
names: Function
names: Similarity
messages: Belongs to the NAD synthetase family.
messages: Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
messages: In the C-terminal section; belongs to the NAD synthetase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS06830
gene id: 521674:PLIM_RS06830
uniprot id: D5SV87
names: Function
names: Similarity
messages: Belongs to the AIR carboxylase family. Class I subfamily.
messages: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).

521674:PLIM RS01245
gene id: 521674:PLIM_RS01245
uniprot id: D5SNU2
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruD family.
messages: Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.

521674:PLIM RS03415
gene id: 521674:PLIM_RS03415
uniprot id: D5SR18
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS03260
gene id: 521674:PLIM_RS03260
uniprot id: D5SQY9
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspG family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.

521674:PLIM RS14685
gene id: 521674:PLIM_RS14685
uniprot id: D5SRI9
names: Similarity
messages: Belongs to the anti-sigma-factor antagonist family.

521674:PLIM RS07620
gene id: 521674:PLIM_RS07620
uniprot id: D5SW18
names: Similarity
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.

521674:PLIM RS10680
gene id: 521674:PLIM_RS10680
uniprot id: D5SYW4
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
messages: Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.
messages: The C-terminal coiled-coil domain is crucial for aminoacylation activity.
messages: ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site.

521674:PLIM RS07100
gene id: 521674:PLIM_RS07100
uniprot id: D5SVE0
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M42 family.
messages: Binds 2 divalent metal cations per subunit.

521674:PLIM RS05370
gene id: 521674:PLIM_RS05370
uniprot id: D5STB5
names: Caution
names: Function
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Fucose synthase subfamily.
messages: Catalyzes the two-step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS07260
gene id: 521674:PLIM_RS07260
uniprot id: D5SVG8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

521674:PLIM RS04870
gene id: 521674:PLIM_RS04870
uniprot id: D5SSN2
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS19350
gene id: 521674:PLIM_RS19350
uniprot id: D5SWI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

521674:PLIM RS20430
gene id: 521674:PLIM_RS20430
uniprot id: D5SXZ2
names: Caution
names: Function
names: Similarity
messages: Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif.

521674:PLIM RS21025
gene id: 521674:PLIM_RS21025
uniprot id: D5SZ00
names: Caution
names: Function
names: Similarity
messages: Belongs to the NrdR family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.

521674:PLIM RS12995
gene id: 521674:PLIM_RS12995
uniprot id: D5SPX5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

521674:PLIM RS23155
gene id: 521674:PLIM_RS23155
uniprot id: D5SU93
names: Similarity
messages: Belongs to the barstar family.

521674:PLIM RS07815
gene id: 521674:PLIM_RS07815
uniprot id: D5SW55
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M42 family.
messages: Binds 2 divalent metal cations per subunit.

521674:PLIM RS13535
gene id: 521674:PLIM_RS13535
uniprot id: D5SQJ5
names: Similarity
messages: Belongs to the FPG family.

521674:PLIM RS08395
gene id: 521674:PLIM_RS08395
uniprot id: D5SWU8
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

521674:PLIM RS15000
gene id: 521674:PLIM_RS15000
uniprot id: D5SS17
names: Similarity
messages: Belongs to the peptidase S51 family.

521674:PLIM RS04850
gene id: 521674:PLIM_RS04850
uniprot id: D5SSM9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

521674:PLIM RS18710
gene id: 521674:PLIM_RS18710
uniprot id: D5SVU2
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS02115
gene id: 521674:PLIM_RS02115
uniprot id: D5SPM8
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS03695
gene id: 521674:PLIM_RS03695
uniprot id: D5SRK8
names: Similarity
messages: Belongs to the sigma-54 factor family.

521674:PLIM RS22440
gene id: 521674:PLIM_RS22440
uniprot id: D5SSL0
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS00640
gene id: 521674:PLIM_RS00640
uniprot id: D5SN52
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS09195
gene id: 521674:PLIM_RS09195
uniprot id: D5SXN7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. TCR/Tet family.
messages: Membrane

521674:PLIM RS02505
gene id: 521674:PLIM_RS02505
uniprot id: D5SQ75
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL4 family.
messages: Forms part of the polypeptide exit tunnel.
messages: One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: Part of the 50S ribosomal subunit.

521674:PLIM RS06575
gene id: 521674:PLIM_RS06575
uniprot id: D5SUQ3
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

521674:PLIM RS17555
gene id: 521674:PLIM_RS17555
uniprot id: D5SUH3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the imidazoleglycerol-phosphate dehydratase family.
messages: Cytoplasm

521674:PLIM RS21400
gene id: 521674:PLIM_RS21400
uniprot id: D5SZ76
names: Similarity
messages: Belongs to the polysaccharide synthase family.

521674:PLIM RS07720
gene id: 521674:PLIM_RS07720
uniprot id: D5SW37
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell membrane
messages: Membrane
messages: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.

521674:PLIM RS13340
gene id: 521674:PLIM_RS13340
uniprot id: D5SQ44
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvP family. N-terminal subunit subfamily.
messages: The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits.

521674:PLIM RS09205
gene id: 521674:PLIM_RS09205
uniprot id: D5SXN9
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aspartate-semialdehyde dehydrogenase family.
messages: Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS16940
gene id: 521674:PLIM_RS16940
uniprot id: D5SU56
names: Caution
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
messages: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS21260
gene id: 521674:PLIM_RS21260
uniprot id: D5SZ44
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

521674:PLIM RS22975
gene id: 521674:PLIM_RS22975
uniprot id: D5SQR3
names: Similarity
messages: Belongs to the flagella basal body rod proteins family.

521674:PLIM RS09305
gene id: 521674:PLIM_RS09305
uniprot id: D5SXQ7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MraZ family.
messages: Forms oligomers.
messages: nucleoid

521674:PLIM RS17680
gene id: 521674:PLIM_RS17680
uniprot id: D5SUW3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
messages: Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
messages: Homodimer.

521674:PLIM RS11070
gene id: 521674:PLIM_RS11070
uniprot id: D5SMR9
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.
messages: Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).
messages: The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.
messages: The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1.

521674:PLIM RS17765
gene id: 521674:PLIM_RS17765
uniprot id: D5SUY0
names: Function
names: Similarity
messages: Belongs to the MsrA Met sulfoxide reductase family.
messages: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.

521674:PLIM RS13430
gene id: 521674:PLIM_RS13430
uniprot id: D5SQH5
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Clade 'B2' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Non-allosteric.

521674:PLIM RS09240
gene id: 521674:PLIM_RS09240
uniprot id: D5SXP5
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS17235
gene id: 521674:PLIM_RS17235
uniprot id: D5SUA9
names: Similarity
messages: Belongs to the Nth/MutY family.

521674:PLIM RS07795
gene id: 521674:PLIM_RS07795
uniprot id: D5SW51
names: Caution
names: Similarity
names: Subunit
messages: Belongs to the glutaminase family.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS07570
gene id: 521674:PLIM_RS07570
uniprot id: D5SW09
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

521674:PLIM RS22535
gene id: 521674:PLIM_RS22535
uniprot id: D5SU25
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

521674:PLIM RS11995
gene id: 521674:PLIM_RS11995
uniprot id: D5SNP3
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
messages: Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
messages: Cytoplasm
messages: Feedback inhibited by histidine.

521674:PLIM RS11060
gene id: 521674:PLIM_RS11060
uniprot id: D5SMR7
names: Cofactor
names: Similarity
messages: Belongs to the Fur family.
messages: Binds 1 Mn(2+) or Fe(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.

521674:PLIM RS21520
gene id: 521674:PLIM_RS21520
uniprot id: D5SZ96
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS11650
gene id: 521674:PLIM_RS11650
uniprot id: D5SNH3
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS15195
gene id: 521674:PLIM_RS15195
uniprot id: D5SS55
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the heme-copper respiratory oxidase family.
messages: Membrane

521674:PLIM RS11715
gene id: 521674:PLIM_RS11715
uniprot id: D5SNI5
names: Similarity
messages: Belongs to the P(II) protein family.

521674:PLIM RS13740
gene id: 521674:PLIM_RS13740
uniprot id: D5SQN5
names: Similarity
messages: Belongs to the GTP cyclohydrolase I type 2/NIF3 family.

521674:PLIM RS11165
gene id: 521674:PLIM_RS11165
uniprot id: D5SMT9
names: Similarity
messages: Belongs to the threonine aldolase family.

521674:PLIM RS21415
gene id: 521674:PLIM_RS21415
uniprot id: D5SZ79
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. FtsY subfamily.
messages: Cell inner membrane
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
messages: Membrane
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.

521674:PLIM RS17285
gene id: 521674:PLIM_RS17285
uniprot id: D5SUC2
names: Function
names: Similarity
messages: Belongs to the MoeA family.
messages: Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP.

521674:PLIM RS11505
gene id: 521674:PLIM_RS11505
uniprot id: D5SNE6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the endoribonuclease YbeY family.
messages: Binds 1 zinc ion.
messages: Cytoplasm
messages: Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.

521674:PLIM RS12100
gene id: 521674:PLIM_RS12100
uniprot id: D5SNQ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 'phage' integrase family. XerC subfamily.
messages: Cytoplasm
messages: Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.

521674:PLIM RS02320
gene id: 521674:PLIM_RS02320
uniprot id: D5SPR1
names: Similarity
messages: Belongs to the universal ribosomal protein uL10 family.

521674:PLIM RS18920
gene id: 521674:PLIM_RS18920
uniprot id: D5SVY2
names: Function
names: Similarity
messages: Belongs to the dus family.
messages: Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines.

521674:PLIM RS00330
gene id: 521674:PLIM_RS00330
uniprot id: D5SMJ7
names: Function
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.

521674:PLIM RS14975
gene id: 521674:PLIM_RS14975
uniprot id: D5SS12
names: Similarity
messages: Belongs to the DSD1 family.

521674:PLIM RS18005
gene id: 521674:PLIM_RS18005
uniprot id: D5SV24
names: Function
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

521674:PLIM RS19790
gene id: 521674:PLIM_RS19790
uniprot id: D5SX38
names: Similarity
messages: Belongs to the SAICAR synthetase family.

521674:PLIM RS17540
gene id: 521674:PLIM_RS17540
uniprot id: D5SUH0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaA family.
messages: Cytoplasm
messages: Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.

521674:PLIM RS05255
gene id: 521674:PLIM_RS05255
uniprot id: D5ST92
names: Similarity
messages: Belongs to the BlaI transcriptional regulatory family.

521674:PLIM RS14605
gene id: 521674:PLIM_RS14605
uniprot id: D5SRH3
names: Function
names: Similarity
messages: Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
messages: DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.

521674:PLIM RS01955
gene id: 521674:PLIM_RS01955
uniprot id: D5SPK0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

521674:PLIM RS09835
gene id: 521674:PLIM_RS09835
uniprot id: D5SYK0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the elongation factor P family.
messages: Cytoplasm
messages: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.

521674:PLIM RS06815
gene id: 521674:PLIM_RS06815
uniprot id: D5SV84
names: Similarity
messages: Belongs to the ComB family.

521674:PLIM RS08635
gene id: 521674:PLIM_RS08635
uniprot id: D5SWZ5
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

521674:PLIM RS05290
gene id: 521674:PLIM_RS05290
uniprot id: D5ST98
names: Similarity
messages: Belongs to the CobT family.

521674:PLIM RS14705
gene id: 521674:PLIM_RS14705
uniprot id: D5SRJ3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0056 (MarC) family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

521674:PLIM RS10685
gene id: 521674:PLIM_RS10685
uniprot id: D5SYW5
names: Similarity
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family.

521674:PLIM RS14885
gene id: 521674:PLIM_RS14885
uniprot id: D5SRZ4
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the NnrE/AIBP family.
messages: Binds 1 potassium ion per subunit.
messages: Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.

521674:PLIM RS18390
gene id: 521674:PLIM_RS18390
uniprot id: D5SVN0
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS16365
gene id: 521674:PLIM_RS16365
uniprot id: D5STG9
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Membrane
messages: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.
messages: The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).

521674:PLIM RS00255
gene id: 521674:PLIM_RS00255
uniprot id: D5SMI1
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS00940
gene id: 521674:PLIM_RS00940
uniprot id: D5SNB0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the diaminopimelate epimerase family.
messages: Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS00080
gene id: 521674:PLIM_RS00080
uniprot id: D5SME7
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the thymidylate synthase ThyX family.
messages: Binds 4 FAD per tetramer. Each FAD binding site is formed by three monomers.
messages: Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS04200
gene id: 521674:PLIM_RS04200
uniprot id: D5SRV5
names: Similarity
messages: Belongs to the bacterial secretin family.

521674:PLIM RS22235
gene id: 521674:PLIM_RS22235
uniprot id: D5SNW3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 6 family.
messages: Cell membrane
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

521674:PLIM RS20345
gene id: 521674:PLIM_RS20345
uniprot id: D5SXX8
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS21300
gene id: 521674:PLIM_RS21300
uniprot id: D5SZ51
names: Similarity
messages: Belongs to the pseudouridine synthase RsuA family.

521674:PLIM RS23450
gene id: 521674:PLIM_RS23450
uniprot id: D5SN15
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01615
gene id: 521674:PLIM_RS01615
uniprot id: D5SP09
names: Function
names: Similarity
messages: Belongs to the APS kinase family.
messages: Catalyzes the synthesis of activated sulfate.

521674:PLIM RS00065
gene id: 521674:PLIM_RS00065
uniprot id: D5SME4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurB family.
messages: Cell wall formation.
messages: Cytoplasm

521674:PLIM RS11775
gene id: 521674:PLIM_RS11775
uniprot id: D5SNJ8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protoporphyrinogen/coproporphyrinogen oxidase family. Coproporphyrinogen III oxidase subfamily.
messages: Cytoplasm
messages: Involved in coproporphyrin-dependent heme b biosynthesis. Catalyzes the oxidation of coproporphyrinogen III to coproporphyrin III.

521674:PLIM RS02460
gene id: 521674:PLIM_RS02460
uniprot id: D5SQ66
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS10495
gene id: 521674:PLIM_RS10495
uniprot id: D5SYS8
names: Similarity
names: Subunit
messages: Belongs to the CarA family.
messages: Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.

521674:PLIM RS16420
gene id: 521674:PLIM_RS16420
uniprot id: D5STH9
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

521674:PLIM RS14690
gene id: 521674:PLIM_RS14690
uniprot id: D5SRJ0
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01905
gene id: 521674:PLIM_RS01905
uniprot id: D5SPJ0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAPS reductase family. CysH subfamily.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS) using thioredoxin as an electron donor.
messages: Cytoplasm

521674:PLIM RS02800
gene id: 521674:PLIM_RS02800
uniprot id: D5SQC0
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

521674:PLIM RS04805
gene id: 521674:PLIM_RS04805
uniprot id: D5SSL9
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type B subfamily.
messages: Part of the 50S ribosomal subunit.

521674:PLIM RS02590
gene id: 521674:PLIM_RS02590
uniprot id: D5SQ92
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Binds to the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

521674:PLIM RS03920
gene id: 521674:PLIM_RS03920
uniprot id: D5SRQ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AIR synthase family.
messages: Cytoplasm

521674:PLIM RS10715
gene id: 521674:PLIM_RS10715
uniprot id: D5SYX2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
messages: Homodimer.

521674:PLIM RS16150
gene id: 521674:PLIM_RS16150
uniprot id: D5ST08
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS08710
gene id: 521674:PLIM_RS08710
uniprot id: D5SXE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Nucleus

521674:PLIM RS09035
gene id: 521674:PLIM_RS09035
uniprot id: D5SXK5
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ThiC family.
messages: Binds 1 [4Fe-4S] cluster per subunit. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.

521674:PLIM RS14215
gene id: 521674:PLIM_RS14215
uniprot id: D5SR96
names: Similarity
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily.

521674:PLIM RS18235
gene id: 521674:PLIM_RS18235
uniprot id: D5SV71
names: Function
names: Similarity
messages: Acts on leucine, isoleucine and valine.
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.

521674:PLIM RS12615
gene id: 521674:PLIM_RS12615
uniprot id: D5SPD1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
messages: Belongs to the RNR ribonuclease family. RNase R subfamily.
messages: Cytoplasm

521674:PLIM RS15200
gene id: 521674:PLIM_RS15200
uniprot id: D5SS56
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 2 family.
messages: Binds a copper A center.
messages: Cell membrane
messages: Membrane
messages: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).

521674:PLIM RS02175
gene id: 521674:PLIM_RS02175
uniprot id: D5SPN8
names: Similarity
messages: Belongs to the UPF0337 (CsbD) family.

521674:PLIM RS06075
gene id: 521674:PLIM_RS06075
uniprot id: D5SU27
names: Similarity
messages: Belongs to the universal stress protein A family.

521674:PLIM RS02555
gene id: 521674:PLIM_RS02555
uniprot id: D5SQ85
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL24 family.
messages: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
messages: One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit.

521674:PLIM RS13510
gene id: 521674:PLIM_RS13510
uniprot id: D5SQJ1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.
messages: This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.

521674:PLIM RS21010
gene id: 521674:PLIM_RS21010
uniprot id: D5SYA5
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS16620
gene id: 521674:PLIM_RS16620
uniprot id: D5STL7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CN hydrolase family. Apolipoprotein N-acyltransferase subfamily.
messages: Catalyzes the phospholipid dependent N-acylation of the N-terminal cysteine of apolipoprotein, the last step in lipoprotein maturation.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS09395
gene id: 521674:PLIM_RS09395
uniprot id: D5SYB3
names: Similarity
messages: Belongs to the peptidase S1C family.

521674:PLIM RS08210
gene id: 521674:PLIM_RS08210
uniprot id: D5SWR6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Membrane

521674:PLIM RS01160
gene id: 521674:PLIM_RS01160
uniprot id: D5SNS6
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. Sigma-S contributes to the protection against external stress, thus playing a role in cellular fitness and survival.

521674:PLIM RS04730
gene id: 521674:PLIM_RS04730
uniprot id: D5SSK4
names: Similarity
messages: Belongs to the helicase family. RecG subfamily.

521674:PLIM RS13305
gene id: 521674:PLIM_RS13305
uniprot id: D5SQ38
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

521674:PLIM RS12635
gene id: 521674:PLIM_RS12635
uniprot id: D5SPD5
names: Similarity
messages: Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.

521674:PLIM RS05920
gene id: 521674:PLIM_RS05920
uniprot id: D5STZ4
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

521674:PLIM RS20435
gene id: 521674:PLIM_RS20435
uniprot id: D5SXZ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNA methyltransferase RsmE family.
messages: Cytoplasm
messages: Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.

521674:PLIM RS07635
gene id: 521674:PLIM_RS07635
uniprot id: D5SW20
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
messages: Could methylate the ribose at the nucleotide 34 wobble position in tRNA.
messages: Cytoplasm

521674:PLIM RS14175
gene id: 521674:PLIM_RS14175
uniprot id: D5SR88
names: Similarity
messages: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.

521674:PLIM RS21265
gene id: 521674:PLIM_RS21265
uniprot id: D5SZ45
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase H family.
messages: Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
messages: Monomer.

521674:PLIM RS16590
gene id: 521674:PLIM_RS16590
uniprot id: D5STL0
names: Similarity
messages: Belongs to the AHA1 family.

521674:PLIM RS07060
gene id: 521674:PLIM_RS07060
uniprot id: D5SVD3
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS05745
gene id: 521674:PLIM_RS05745
uniprot id: D5STV9
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. SDR39U1 subfamily.

521674:PLIM RS08800
gene id: 521674:PLIM_RS08800
uniprot id: D5SXF9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

521674:PLIM RS06120
gene id: 521674:PLIM_RS06120
uniprot id: D5SU35
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 'phage' integrase family. XerC subfamily.
messages: Belongs to the 'phage' integrase family. XerD subfamily.
messages: Cytoplasm
messages: Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.

521674:PLIM RS19235
gene id: 521674:PLIM_RS19235
uniprot id: D5SWF9
names: Similarity
messages: Belongs to the SIS family. GutQ/KpsF subfamily.

521674:PLIM RS17375
gene id: 521674:PLIM_RS17375
uniprot id: D5SUE1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 87 family.
messages: Membrane

521674:PLIM RS06980
gene id: 521674:PLIM_RS06980
uniprot id: D5SVB7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Cytoplasm

521674:PLIM RS15240
gene id: 521674:PLIM_RS15240
uniprot id: D5SS63
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family.
messages: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
messages: Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis. Some bacteria have evolved a zinc-coordinating structure that stabilizes the LID domain.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

521674:PLIM RS08840
gene id: 521674:PLIM_RS08840
uniprot id: D5SXG7
names: Subunit
messages: Homodimer.

521674:PLIM RS11690
gene id: 521674:PLIM_RS11690
uniprot id: D5SNI0
names: Similarity
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.

521674:PLIM RS16700
gene id: 521674:PLIM_RS16700
uniprot id: D5STN3
names: Function
names: Similarity
messages: Belongs to the glucose-1-phosphate thymidylyltransferase family.
messages: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis.

521674:PLIM RS20710
gene id: 521674:PLIM_RS20710
uniprot id: D5SY45
names: Similarity
messages: Belongs to the UDPGP type 1 family.

521674:PLIM RS14785
gene id: 521674:PLIM_RS14785
uniprot id: D5SRX7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a magnesium transporter.
messages: Belongs to the SLC41A transporter family.
messages: Cell membrane
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

521674:PLIM RS04455
gene id: 521674:PLIM_RS04455
uniprot id: D5SSE5
names: Similarity
messages: Belongs to the helicase family. UvrD subfamily.

521674:PLIM RS09245
gene id: 521674:PLIM_RS09245
uniprot id: D5SXP6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial microcompartment
messages: Belongs to the EutB family.
messages: Binds between the large and small subunits.
messages: Catalyzes the deamination of various vicinal amino-alcohols to oxo compounds. Allows this organism to utilize ethanolamine as the sole source of nitrogen and carbon in the presence of vitamin B12.
messages: The basic unit is a heterodimer which dimerizes to form tetramers. The heterotetramers trimerize; 6 large subunits form a core ring with 6 small subunits projecting outwards.

521674:PLIM RS08810
gene id: 521674:PLIM_RS08810
uniprot id: D5SXG1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

521674:PLIM RS06835
gene id: 521674:PLIM_RS06835
uniprot id: D5SV88
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PurK/PurT family.
messages: Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
messages: Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
messages: Homodimer.

521674:PLIM RS06135
gene id: 521674:PLIM_RS06135
uniprot id: D5SU38
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS15025
gene id: 521674:PLIM_RS15025
uniprot id: D5SS22
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GrpE family.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.

521674:PLIM RS16370
gene id: 521674:PLIM_RS16370
uniprot id: D5STH0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
messages: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.
messages: The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).

521674:PLIM RS06130
gene id: 521674:PLIM_RS06130
uniprot id: D5SU37
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SurE nucleotidase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Cytoplasm
messages: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

521674:PLIM RS08865
gene id: 521674:PLIM_RS08865
uniprot id: D5SXH2
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
messages: Binds 1 potassium ion per subunit.
messages: Cytoplasm
messages: Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS01665
gene id: 521674:PLIM_RS01665
uniprot id: D5SP20
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS15185
gene id: 521674:PLIM_RS15185
uniprot id: D5SS53
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
messages: Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.
messages: Cell inner membrane
messages: Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
messages: Membrane

521674:PLIM RS22760
gene id: 521674:PLIM_RS22760
uniprot id: D5SXU6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS11750
gene id: 521674:PLIM_RS11750
uniprot id: D5SNJ2
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatC family.
messages: Heterotrimer of A, B and C subunits.

521674:PLIM RS17985
gene id: 521674:PLIM_RS17985
uniprot id: D5SV20
names: Similarity
messages: Belongs to the glycogen phosphorylase family.

521674:PLIM RS11720
gene id: 521674:PLIM_RS11720
uniprot id: D5SNI6
names: Similarity
messages: Belongs to the P(II) protein family.

521674:PLIM RS17465
gene id: 521674:PLIM_RS17465
uniprot id: D5SUF7
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS04470
gene id: 521674:PLIM_RS04470
uniprot id: D5SSE8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS21 family.

521674:PLIM RS14720
gene id: 521674:PLIM_RS14720
uniprot id: D5SRJ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

521674:PLIM RS14535
gene id: 521674:PLIM_RS14535
uniprot id: D5SRF8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HisA/HisF family.
messages: Cytoplasm
messages: Heterodimer of HisH and HisF.
messages: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.

521674:PLIM RS08905
gene id: 521674:PLIM_RS08905
uniprot id: D5SXI0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
messages: Belongs to the KdsB family.
messages: Cytoplasm

521674:PLIM RS11125
gene id: 521674:PLIM_RS11125
uniprot id: D5SMT1
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. Uronate isomerase family.

521674:PLIM RS13345
gene id: 521674:PLIM_RS13345
uniprot id: D5SQ45
names: Function
messages: The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.

521674:PLIM RS11935
gene id: 521674:PLIM_RS11935
uniprot id: D5SNN0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PNP synthase family.
messages: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
messages: Cytoplasm
messages: Homooctamer; tetramer of dimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS10125
gene id: 521674:PLIM_RS10125
uniprot id: D5SXU9
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS13955
gene id: 521674:PLIM_RS13955
uniprot id: D5SQS5
names: Similarity
messages: Belongs to the DapA family.

521674:PLIM RS21060
gene id: 521674:PLIM_RS21060
uniprot id: D5SZ08
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

521674:PLIM RS04280
gene id: 521674:PLIM_RS04280
uniprot id: D5SRX1
names: Cofactor
names: PTM
names: Subcellular Location Annotation
messages: Binds 2 heme groups per subunit.
messages: Binds 2 heme groups.
messages: Periplasm

521674:PLIM RS10320
gene id: 521674:PLIM_RS10320
uniprot id: D5SYP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anion channel-forming bestrophin (TC 1.A.46) family.
messages: Membrane

521674:PLIM RS07770
gene id: 521674:PLIM_RS07770
uniprot id: D5SW47
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.

521674:PLIM RS06855
gene id: 521674:PLIM_RS06855
uniprot id: D5SV92
names: Similarity
messages: Belongs to the SOS response-associated peptidase family.

521674:PLIM RS11190
gene id: 521674:PLIM_RS11190
uniprot id: D5SMU5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).
messages: Belongs to the AccA family.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
messages: Cytoplasm

521674:PLIM RS08205
gene id: 521674:PLIM_RS08205
uniprot id: D5SWR5
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

521674:PLIM RS03340
gene id: 521674:PLIM_RS03340
uniprot id: D5SR04
names: Similarity
messages: Belongs to the heat shock protein 70 family.

521674:PLIM RS04400
gene id: 521674:PLIM_RS04400
uniprot id: D5SSD4
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 3 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.

521674:PLIM RS20735
gene id: 521674:PLIM_RS20735
uniprot id: D5SY50
names: Similarity
messages: Belongs to the TrpF family.

521674:PLIM RS05245
gene id: 521674:PLIM_RS05245
uniprot id: D5ST90
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS01400
gene id: 521674:PLIM_RS01400
uniprot id: D5SNX2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
messages: Membrane

521674:PLIM RS20550
gene id: 521674:PLIM_RS20550
uniprot id: D5SY14
names: Similarity
messages: Belongs to the methylenetetrahydrofolate reductase family.

521674:PLIM RS12990
gene id: 521674:PLIM_RS12990
uniprot id: D5SPX4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

521674:PLIM RS13880
gene id: 521674:PLIM_RS13880
uniprot id: D5SQQ9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Probable transporter of a GTP-driven Fe(2+) uptake system.

521674:PLIM RS19335
gene id: 521674:PLIM_RS19335
uniprot id: D5SWH7
names: Function
names: Similarity
messages: Belongs to the bacterioferritin family.
messages: Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex.

521674:PLIM RS13440
gene id: 521674:PLIM_RS13440
uniprot id: D5SQH7
names: Similarity
messages: Belongs to the asparagine synthetase family.

521674:PLIM RS12605
gene id: 521674:PLIM_RS12605
uniprot id: D5SPC9
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IspF family.
messages: Binds 1 divalent metal cation per subunit.
messages: Homotrimer.
messages: Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS12590
gene id: 521674:PLIM_RS12590
uniprot id: D5SPC6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvC family.
messages: Binds 2 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Homodimer which binds Holliday junction (HJ) DNA. The HJ becomes 2-fold symmetrical on binding to RuvC with unstacked arms; it has a different conformation from HJ DNA in complex with RuvA. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.
messages: The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair. Endonuclease that resolves HJ intermediates. Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction. The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'. Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange. HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.

521674:PLIM RS12255
gene id: 521674:PLIM_RS12255
uniprot id: D5SP61
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS07065
gene id: 521674:PLIM_RS07065
uniprot id: D5SVD4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DapA family.
messages: Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.
messages: Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB.

521674:PLIM RS16020
gene id: 521674:PLIM_RS16020
uniprot id: D5SSY4
names: Function
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.

521674:PLIM RS06570
gene id: 521674:PLIM_RS06570
uniprot id: D5SUQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.
messages: Catalyzes the oxidation of L-aspartate to iminoaspartate.
messages: Cytoplasm

521674:PLIM RS02120
gene id: 521674:PLIM_RS02120
uniprot id: D5SPM9
names: Similarity
messages: Belongs to the GSP E family.

521674:PLIM RS14870
gene id: 521674:PLIM_RS14870
uniprot id: D5SRZ0
names: Similarity
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.

521674:PLIM RS12640
gene id: 521674:PLIM_RS12640
uniprot id: D5SPD6
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS07305
gene id: 521674:PLIM_RS07305
uniprot id: D5SVH7
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS14970
gene id: 521674:PLIM_RS14970
uniprot id: D5SS11
names: Cofactor
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. NagA family.
messages: Binds 1 divalent metal cation per subunit.

521674:PLIM RS02305
gene id: 521674:PLIM_RS02305
uniprot id: D5SPQ8
names: Function
names: Similarity
messages: Belongs to the NusG family.
messages: Participates in transcription elongation, termination and antitermination.

521674:PLIM RS07250
gene id: 521674:PLIM_RS07250
uniprot id: D5SVG6
names: Similarity
messages: Belongs to the peptidase S49 family.

521674:PLIM RS09705
gene id: 521674:PLIM_RS09705
uniprot id: D5SYH4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.
messages: Cell inner membrane
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system and for the release of the potassium ions to the cytoplasm.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

521674:PLIM RS07825
gene id: 521674:PLIM_RS07825
uniprot id: D5SW57
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS17295
gene id: 521674:PLIM_RS17295
uniprot id: D5SUC4
names: Caution
names: Function
names: Similarity
messages: Belongs to the DXR family.
messages: Catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

521674:PLIM RS12900
gene id: 521674:PLIM_RS12900
uniprot id: D5SPV4
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

521674:PLIM RS09740
gene id: 521674:PLIM_RS09740
uniprot id: D5SYI1
names: Similarity
messages: Belongs to the sulfatase family.

521674:PLIM RS19565
gene id: 521674:PLIM_RS19565
uniprot id: D5SWM3
names: Similarity
messages: Belongs to the AlaDH/PNT family.

521674:PLIM RS21170
gene id: 521674:PLIM_RS21170
uniprot id: D5SZ28
names: Function
names: PTM
names: Similarity
messages: Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.

521674:PLIM RS11725
gene id: 521674:PLIM_RS11725
uniprot id: D5SNI7
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
messages: Belongs to the GlnD family.
messages: Has four distinct domains: an N-terminal nucleotidyltransferase (NT) domain responsible for UTase activity, a central HD domain that encodes UR activity, and two C-terminal ACT domains that seem to have a role in glutamine sensing.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.
messages: Uridylyltransferase (UTase) activity is inhibited by glutamine, while glutamine activates uridylyl-removing (UR) activity.

521674:PLIM RS04210
gene id: 521674:PLIM_RS04210
uniprot id: D5SRV7
names: Similarity
messages: Belongs to the peptidase A24 family.

521674:PLIM RS05840
gene id: 521674:PLIM_RS05840
uniprot id: D5STY0
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS03935
gene id: 521674:PLIM_RS03935
uniprot id: D5SRQ3
names: Subcellular Location Annotation
messages: Membrane

521674:PLIM RS10625
gene id: 521674:PLIM_RS10625
uniprot id: D5SYV3
names: Similarity
messages: Belongs to the anti-sigma-factor antagonist family.

521674:PLIM RS14440
gene id: 521674:PLIM_RS14440
uniprot id: D5SRD9
names: Function
names: Similarity
messages: Belongs to the MqnA/MqnD family. MqnA subfamily.
messages: Catalyzes the dehydration of chorismate into 3-[(1-carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).

521674:PLIM RS09690
gene id: 521674:PLIM_RS09690
uniprot id: D5SYH0
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

521674:PLIM RS03265
gene id: 521674:PLIM_RS03265
uniprot id: D5SQZ0
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

521674:PLIM RS11815
gene id: 521674:PLIM_RS11815
uniprot id: D5SNK6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Membrane

521674:PLIM RS16395
gene id: 521674:PLIM_RS16395
uniprot id: D5STH5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TrpA family.
messages: Tetramer of two alpha and two beta chains.
messages: The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.

521674:PLIM RS10045
gene id: 521674:PLIM_RS10045
uniprot id: D5SXT3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
messages: Cytoplasm