47865:GA0070613 RS12775
gene id: 47865:GA0070613_RS12775
uniprot id: A0A1C5IBN4
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

47865:GA0070613 RS06310
gene id: 47865:GA0070613_RS06310
uniprot id: A0A1C5HHH6
names: Similarity
messages: Belongs to the CsoR family.

47865:GA0070613 RS12825
gene id: 47865:GA0070613_RS12825
uniprot id: A0A1C5IBQ4
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL30 family.
messages: Part of the 50S ribosomal subunit.

47865:GA0070613 RS12870
gene id: 47865:GA0070613_RS12870
uniprot id: A0A1C5IDQ9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

47865:GA0070613 RS12710
gene id: 47865:GA0070613_RS12710
uniprot id: A0A1C5IBD2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

47865:GA0070613 RS13755
gene id: 47865:GA0070613_RS13755
uniprot id: A0A1C5IGY6
names: Cofactor
names: Function
messages: Binds 1 [3Fe-4S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

47865:GA0070613 RS09215
gene id: 47865:GA0070613_RS09215
uniprot id: A0A1C5HVI0
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

47865:GA0070613 RS12770
gene id: 47865:GA0070613_RS12770
uniprot id: A0A1C5ICG7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

47865:GA0070613 RS12800
gene id: 47865:GA0070613_RS12800
uniprot id: A0A1C5IDG3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

47865:GA0070613 RS12880
gene id: 47865:GA0070613_RS12880
uniprot id: A0A1C5ICX6
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

47865:GA0070613 RS04255
gene id: 47865:GA0070613_RS04255
uniprot id: A0A1C5H616
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional regulator. Probably redox-responsive. The apo- but not holo-form probably binds DNA.
messages: Belongs to the WhiB family.
messages: Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.
messages: Cytoplasm
messages: The Fe-S cluster can be nitrosylated by nitric oxide (NO).
messages: Upon Fe-S cluster removal intramolecular disulfide bonds are formed.

47865:GA0070613 RS24860
gene id: 47865:GA0070613_RS24860
uniprot id: A0A1C5JQ39
names: Similarity
names: Subunit
messages: Belongs to the sigma-70 factor family. ECF subfamily.
messages: Interacts transiently with the RNA polymerase catalytic core formed by RpoA, RpoB, RpoC and RpoZ (2 alpha, 1 beta, 1 beta' and 1 omega subunit) to form the RNA polymerase holoenzyme that can initiate transcription.

47865:GA0070613 RS28455
gene id: 47865:GA0070613_RS28455
uniprot id: A0A1C5JYJ9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

47865:GA0070613 RS12635
gene id: 47865:GA0070613_RS12635
uniprot id: A0A1C5IC85
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

47865:GA0070613 RS12755
gene id: 47865:GA0070613_RS12755
uniprot id: A0A1C5ICP1
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

47865:GA0070613 RS12855
gene id: 47865:GA0070613_RS12855
uniprot id: A0A1C5IDN9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

47865:GA0070613 RS28325
gene id: 47865:GA0070613_RS28325
uniprot id: A0A1C5JXY4
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

47865:GA0070613 RS12085
gene id: 47865:GA0070613_RS12085
uniprot id: A0A1C5I8X1
names: Subcellular Location Annotation
messages: Cytoplasm

47865:GA0070613 RS09370
gene id: 47865:GA0070613_RS09370
uniprot id: A0A1C5HW98
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein bS6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein bS6.

47865:GA0070613 RS24200
gene id: 47865:GA0070613_RS24200
uniprot id: A0A1C5JNB0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sbp family.
messages: Cell membrane

47865:GA0070613 RS12785
gene id: 47865:GA0070613_RS12785
uniprot id: A0A1C5ICS8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

47865:GA0070613 RS28975
gene id: 47865:GA0070613_RS28975
uniprot id: A0A1C5JZJ0
names: Subcellular Location Annotation
messages: Cytoplasm

47865:GA0070613 RS13815
gene id: 47865:GA0070613_RS13815
uniprot id: A0A1C5IG53
names: Subcellular Location Annotation
messages: Cytoplasm

47865:GA0070613 RS00080
gene id: 47865:GA0070613_RS00080
uniprot id: A0A1C5GKD4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SsgA family.
messages: Cell septum

47865:GA0070613 RS12730
gene id: 47865:GA0070613_RS12730
uniprot id: A0A1C5IBD0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.