3702:AT1G53870
gene id: 3702:AT1G53870
uniprot id: Q67XV7
uniprot id: Q8LG32
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

3702:AT2G21160
gene id: 3702:AT2G21160
uniprot id: F4IGI4
uniprot id: P45434
uniprot id: Q5M727
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP-alpha family.
messages: Endoplasmic reticulum membrane
messages: Heterotetramer of TRAP-alpha, TRAP-beta, TRAP-delta and TRAP-gamma.
messages: Membrane
messages: Phosphorylated in its cytoplasmic tail.
messages: Seems to bind calcium.
messages: Shows a remarkable charge distribution with the N-terminus being highly negatively charged, and the cytoplasmic C-terminus positively charged.
messages: TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. May be involved in the recycling of the translocation apparatus after completion of the translocation process or may function as a membrane-bound chaperone facilitating folding of translocated proteins.

3702:AT1G61480
gene id: 3702:AT1G61480
uniprot id: O64771
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G08630
gene id: 3702:AT1G08630
uniprot id: A0A1P8ASQ3
uniprot id: A0A654E972
uniprot id: Q8RXU4
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the threonine aldolase family.
messages: Expressed in root tips, seedlings, carpels and seeds.
messages: No visible phenotype under normal growth conditions, but mutant plants have 50-fold increase in seed Thr content and 2-fold decrease in seedling Gly content.
messages: Threonine aldolase involved in threonine degradation to glycine. May play a role in the removal of L-allo-threonine.

3702:AT1G04300
gene id: 3702:AT1G04300
uniprot id: A8MQL1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: Cytoplasm
messages: Forms homooligomers. Interacts with SNC1, RPS2 and CPR1/CPR30 (PubMed:26867179). Interacts with ATG6 (PubMed:28351989).
messages: Functions redundantly with TRAF1A in the regulation of plant immune response. Contributes to the turnover of the nucleotide-binding domain and leucine-rich repeat-containing (NB-LRR) immune receptors SNC1 and RPS2. May associate with an E3 ubiquitin-protein ligase complex, which modulates ubiquitination and subsequent degradation of NB-LRR immune sensors to maintain their homeostasis (PubMed:26867179). Functions redundantly with TRAF1A in the regulation of autophagosome formation. Required for SINAT1- and SINAT2-mediated ubiquitination and destabilization of ATG6. Functions as molecular adapter that helps to regulate autophagy by modulating ATG6 stability (PubMed:28351989).
messages: No visible phenotype under normal growth conditions, but the double mutant plants traf1a and traf1b, or muse13 and muse14 are extremely dwarf when grown at room temperature.

3702:AT5G16310
gene id: 3702:AT5G16310
uniprot id: Q9FFF2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase C12 family.
messages: Cytoplasm
messages: Expressed in leaves, stems, sepals, stamens, petals, roots, hypocotyls and cotyledons.
messages: Heterodimer (PubMed:22951400). Interacts with EER5 (PubMed:19843313, PubMed:22951400). Interacts with UCH2, DSS1(V), DSS1(I), RPN3A, RPN3B, RPN12A, RPN12B, SAC3B, CML20 and NUP1 (PubMed:22951400).
messages: No visible phenotype. Uch1 and uch2 double mutants are less fertile, accumulated less chlorophyll and have slightly fewer and shorter cauline branches.
messages: Nucleus
messages: UCH1 and UCH2 are not integral polypeptides of the 26S proteasome, unlike their S.pombe and animal orthologs (PubMed:17559514). However, they interact with the 26S proteasome lid complex as well as to the TREX-2 complex (PubMed:22951400).
messages: Ubiquitin-protein hydrolase involved in the release of ubiquitin attached via both peptide and isopeptide linkages. Able to cleave 'Lys-48'-linked polyubiquitin chains. Involved in the direct or indirect regulation of AUX/IAA proteins stability (Probable). Acts as a linker between the TREX-2 complex and 26S proteasome (PubMed:22951400).

3702:AT5G13450
gene id: 3702:AT5G13450
uniprot id: B9DGP8
uniprot id: Q96251
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase delta chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain and the peripheric stalk, which acts as a stator to hold the catalytic alpha(3)beta(3) subcomplex and subunit a/ATP6 static relative to the rotary elements.
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT5G58200
gene id: 3702:AT5G58200
uniprot id: A0A178U6W6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G10270
gene id: 3702:AT3G10270
uniprot id: A0A1I9LTQ6
uniprot id: Q9SS38
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.
messages: Belongs to the type II topoisomerase GyrB family.
messages: Binds two Mg(2+) per subunit. The magnesium ions form salt bridges with both the protein and the DNA. Can also accept other divalent metal cations, such as Mn(2+) or Ca(2+).
messages: Made up of two chains. The A chain is responsible for DNA breakage and rejoining; the B chain catalyzes ATP hydrolysis.
messages: chloroplast

3702:AT4G01580
gene id: 3702:AT4G01580
uniprot id: Q9ZSH7
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G22942
gene id: 3702:AT2G22942
uniprot id: B3H4C2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phytosulfokine family.
messages: PSK-alpha is produced by endopeptidase digestion. PSK-beta is produced from PSK-alpha by exopeptidase digestion.
messages: Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
messages: Secreted
messages: Sulfation is important for activity and for the binding to a putative membrane receptor.

3702:AT1G01290
gene id: 3702:AT1G01290
uniprot id: Q39056
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abundantly expressed in the roots.
messages: Belongs to the MoaC family.
messages: Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).
messages: Homohexamer.
messages: Mitochondrion matrix

3702:AT1G78780
gene id: 3702:AT1G78780
uniprot id: A0A178W8Q8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G06860
gene id: 3702:AT5G06860
uniprot id: A0A178UBN4
uniprot id: Q9M5J9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polygalacturonase-inhibiting protein family.
messages: Inhibitor of fungal polygalacturonase. It is an important factor for plant resistance to phytopathogenic fungi.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT1G75990
gene id: 3702:AT1G75990
uniprot id: Q9LQR8
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the proteasome subunit S3 family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively (PubMed:14623884, PubMed:20516081). Interacts with UCH1 and UCH2 (PubMed:22951400).
messages: Preferentially expressed in flowers.

3702:AT3G02560
gene id: 3702:AT3G02560
uniprot id: A0A178VB48
uniprot id: Q9M885
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS7 family.

3702:AT4G08930
gene id: 3702:AT4G08930
uniprot id: A0A7G2EY74
uniprot id: Q9ZPE9
names: Sequence Caution
names: Subcellular Location Annotation
messages: Intron retention.
messages: Membrane

3702:AT5G28646
gene id: 3702:AT5G28646
uniprot id: A0A1P8BFP4
uniprot id: Q84ZT9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPX2 family.
messages: Expressed in seedlings, cotyledons, hypocotyls, roots, leaves, flowers, inflorescence stems and siliques.
messages: Microtubule-associated protein (MAP) that regulates the orientation of interphase cortical microtubules. Able to bundle microtubules in vitro. Modulates both rotational polarity and anisotropic cell expansion during organ growth. Promotes clockwise root and etiolated hypocotyls coiling, clockwise leaf curling, but left-handed petiole twisting.
messages: cytoskeleton

3702:AT3G61880
gene id: 3702:AT3G61880
uniprot id: A0A178V6J4
uniprot id: F4IX02
uniprot id: Q9SLP1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Expressed in the funiculus of developing ovules.
messages: Membrane
messages: Plays a role in seed and fruit development. Functions probably in association with CYP78A6 in the regulation of seed growth.
messages: Slight reduction in seed size.
messages: The gain of function mutant 28-5 (T-DNA tagging) in apetala2-1 (ap2-1) mutant background show enlarged and wide pistils and siliques.

3702:AT4G20570
gene id: 3702:AT4G20570
uniprot id: P0CJ60
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT5G20740
gene id: 3702:AT5G20740
uniprot id: Q84WE4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Down-regulated in leaves during infection with Botrytis cinerea.
messages: Expressed in apical meristem.
messages: Pectin methylesterase (PME) inhibitor that can target PMEs (e.g. PME2 and PME3) in a pH-dependent manner, mainly in slightly acidic conditions (pH 6.3 and 5.0) but not at pH 7.5; this processus relies on changes in the protonation of amino acids involved in intermolecular and intramolecular interactions (PubMed:36147700, PubMed:19097903). Regulates de-methylesterification of pectins in the apical meristem and affects primordia formation and phyllotactic patterning (PubMed:19097903).
messages: apoplast

3702:AT1G09590
gene id: 3702:AT1G09590
uniprot id: A0A178WPH9
uniprot id: Q43291
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL21 family.

3702:AT2G37690
gene id: 3702:AT2G37690
uniprot id: A0A654EZT9
uniprot id: Q84TI2
names: Similarity
messages: In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.

3702:AT1G18410
gene id: 3702:AT1G18410
uniprot id: A0A1P8AVA1
uniprot id: A0A1P8AVE6
uniprot id: A0A1P8AVE8
uniprot id: A0A2H1ZEB7
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

3702:AT2G30690
gene id: 3702:AT2G30690
uniprot id: F4INW9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Endomembrane system
messages: Membrane-anchored myosin receptors that define a distinct, plant-specific transport vesicle compartment.
messages: No visible phenotype. Myob1, myob2, myob3 and myob4 quadruple mutant has a significant height reduction, a reduced rosette diameter and a delayed flowering.

3702:AT1G07700
gene id: 3702:AT1G07700
uniprot id: Q9C5C5
names: Caution
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family.
messages: Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.
messages: Sequencing errors.
messages: The active site contains a CGSC motif wich differs from the conserved CGPC motif.
messages: chloroplast

3702:AT4G02235
gene id: 3702:AT4G02235
uniprot id: A0A178UXV6
uniprot id: O81421
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G50180
gene id: 3702:AT5G50180
uniprot id: A0A178UKR9
uniprot id: Q9FGS7
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT2G41060
gene id: 3702:AT2G41060
uniprot id: O80678
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By wounding.
messages: Expressed in shoot meristem and flowers.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-like protein that acts as component of a complex regulating the turnover of mRNAs in the nucleus. Binds with high affinity to RNA molecules that contain U-rich sequences in 3'-UTRs. May function in complex with UBP1 and contribute to the stabilization of mRNAs in the nucleus (By similarity).
messages: Nucleus
messages: Plants over-expressing UB2A1 display severe growth defects consisting of premature cell death and chlorosis.

3702:AT1G04880
gene id: 3702:AT1G04880
uniprot id: Q9MAT6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HMGB family.
messages: Binds preferentially DNA with A/T-rich content.
messages: Nucleus

3702:AT1G60970
gene id: 3702:AT1G60970
uniprot id: Q940S5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes small subunit family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex (By similarity).

3702:AT5G51640
gene id: 3702:AT5G51640
uniprot id: Q9FHM0
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: By dark.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Expressed in roots, cauline leaves and flowers.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane
messages: Up-regulated in leaves during natural senescence.

3702:AT5G48010
gene id: 3702:AT5G48010
uniprot id: Q9FI37
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the terpene cyclase/mutase family.
messages: Constitutes with three contiguous genes an operon-like gene cluster that is involved in the thalianol pathway.
messages: Converts oxidosqualene to thalianol.
messages: Expressed primarily in the root epidermis.
messages: Induced by gravity and light (PubMed:21252258). Transcriptional expression is repressed by CLB (PubMed:21252258).
messages: Loss of thalianol production in roots.

3702:AT2G48130
gene id: 3702:AT2G48130
uniprot id: A0A384LDL4
uniprot id: Q7EB72
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Expressed in seedlings, preferentially in the endodermis of hypocotyls and roots (PubMed:21558309, PubMed:23893219). Also observed in siliques (PubMed:23893219).
messages: In roots, restricted to the endodermis/pericycle above the middle of the differentiation zone and the regions where new lateral roots are emerging.
messages: Membrane
messages: Probable lipid transfer protein.

3702:AT1G09180
gene id: 3702:AT1G09180
uniprot id: O80489
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. SAR1 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Involved in transport from the endoplasmic reticulum to the Golgi apparatus.

3702:AT1G47830
gene id: 3702:AT1G47830
uniprot id: A0A178W398
uniprot id: Q84WL9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 2 (AP-2) is a heterotetramer composed of two large adaptins (alpha-type and beta-type subunits), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes small subunit family.
messages: Cell membrane
messages: Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The complex binds polyphosphoinositides (By similarity).
messages: coated pit

3702:AT4G04610
gene id: 3702:AT4G04610
uniprot id: P92979
names: Activity Regulation
names: Cofactor
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the APS reductase family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Induced by sulfate starvation (PubMed:8917599). Induced by cadmium (PubMed:16502469).
messages: Leaves, roots and stem.
messages: Reduces sulfate for Cys biosynthesis. Substrate preference is adenosine-5'-phosphosulfate (APS) >> 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Uses glutathione or DTT as source of protons.
messages: Stimulated by sodium sulfate > ammonium sulfate and is sensitive to inactivation by 5'AMP.
messages: The C-terminal domain may function as glutaredoxin and mediates the interaction of the enzyme with glutathione (GSH). Active in GSH-dependent reduction of hydroxyethyldisulfide, cystine, dehydroascorbate, insulin disulfides and ribonucleotide reductase.
messages: chloroplast

3702:AT1G20380
gene id: 3702:AT1G20380
uniprot id: A0A1P8APL9
uniprot id: F4HSS5
names: Similarity
messages: Belongs to the peptidase S9A family.

3702:AT2G20840
gene id: 3702:AT2G20840
uniprot id: A0A1P8AXH0
uniprot id: A0A5S9WZY0
uniprot id: Q9SKT3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SCAMP family.
messages: Cell membrane
messages: Membrane
messages: Probably involved in membrane trafficking.
messages: secretory vesicle membrane

3702:AT4G34350
gene id: 3702:AT4G34350
uniprot id: Q94B35
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino phenotype and seedling lethal when homozygous. The phenotype is caused by an early arrest in chloroplast differentiation.
messages: Belongs to the IspH family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Circadian-regulated with a peak in the late period of dark phase and early period of the light phase.
messages: Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Is essential for chloroplast development.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: chloroplast stroma

3702:AT1G54040
gene id: 3702:AT1G54040
uniprot id: Q8RY71
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accelerated leaf senescence and increased pathogen damages.
messages: By jasmonate.
messages: Cytoplasm
messages: Does not contain the mannose-binding lectin domain present in other members of the family.
messages: ESP is functional in cv. Landsberg erecta while the gene encoding the protein is not expressed in cv. Columbia, cv. Da(1)-12 and cv. Ru-0. ESP activity is regulated at the transcriptional, the post-transcriptional and the post-translational levels.
messages: Expressed in epidermal cells of all above-ground organs except the anthers, in cambial cells of leaf and stem vascular bundles, and in glucosinolates rich S-cells found in stems just below the inflorescence. Absent from roots.
messages: Homodimer (PubMed:27498030). Interacts with WRKY53 (PubMed:17369373).
messages: Not dependent on the presence of Fe(2+) although supplemental Fe(2+) increases nitriles formation.
messages: Nucleus
messages: Specifier protein that contributes to constitutive and herbivore-induced simple nitrile formation (By similarity). Converts glucosinolates both to epithionitriles and to simple nitriles in the presence of myrosinase (PubMed:23999604). Promotes the formation of epithionitriles after hydrolysis of alkenylglucosinolates containing a terminal double bond. Mediates indol-3-ylacetonitrile (IACN) production from indol-3-ylmethylglucosinolate (glucobrassicin) (PubMed:22954730). Triggers the production of 3,4-epithiobutylnitrile from 2-propenylisothiocyanate, product of 2-propenylglucosinolate (sinigrin) catalysis by myrosinase (PubMed:19224919, PubMed:22954730). Seems inactive toward benzylglucosinolate (glucotropaeolin) (PubMed:22954730). Acts as a negative regulator of senescence.
messages: The proton donor differs depending on substrates.

3702:AT2G17525
gene id: 3702:AT2G17525
uniprot id: Q84VG6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G11050
gene id: 3702:AT1G11050
uniprot id: O04086
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT2G27460
gene id: 3702:AT2G27460
uniprot id: Q9ZQH3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
messages: COPII-coated vesicle membrane
messages: Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER) (By similarity). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity). May contribute to COPII-coated vesicles formation and ER-Golgi vesicle transport (PubMed:29390074). Together with SEC23A, essential for pollen wall development and exine patterning, probably by regulating endoplasmic reticulum (ER) export of lipids and proteins (e.g. sporopollenin) necessary for pollen wall formation (PubMed:29390074). Also involved in plastid physiology in anther tapetal cells (PubMed:29390074).
messages: Component of the coat protein complex II (COPII), composed of at least five proteins: the Sec23/24 complex, the Sec13/31 complex and Sar1.
messages: Despite normal fertility, impaired pollen coat exine pattern formation with reduced sporopollenin levels (PubMed:29390074). Plants lacking both SEC23A and SEC23D are semi-sterile and exhibit developmental defects in pollen (especially at the late uninucleate stage) and tapetal cells, including defective exine and intine, as well as signs of cell degeneration and structural abnormalities in organelles of the male gametophytes (PubMed:29390074).
messages: Endoplasmic reticulum membrane
messages: In floral organs, only observed in buds, pollen grains, pollen tubes and fertilized ovules (PubMed:29390074). Highly expressed in the anther tapetum at uninucleate and bicellular stages (PubMed:29390074).
messages: Membrane
messages: Mostly expressed in closed floral bud, pollen and flowers, and, to a lower extent, in mature siliques, roots and leaf primordia.

3702:AT4G23640
gene id: 3702:AT4G23640
uniprot id: A0A384KFZ5
uniprot id: Q0WVZ0
uniprot id: Q9FE38
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Detected at very low levels in roots, stems, leaves and flowers of mature plants.
messages: High-affinity potassium transporter required for tip growth of root hairs.
messages: Highly expressed in roots in the early stage of seedlings growth.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Loss-of-function mutation results in the arrest of root hair growth.
messages: Membrane
messages: Potassium transporter.

3702:AT2G39450
gene id: 3702:AT2G39450
uniprot id: A0A178VPD8
uniprot id: O80632
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
messages: Cation/proton antiporter involved in endogenous manganese tolerance probably through vesicular trafficking and exocytosis.
messages: Golgi apparatus membrane
messages: Increased accumulation of manganese and hypersensitivity to elevated levels of manganese.
messages: Membrane
messages: Prevacuolar compartment membrane
messages: Widely expressed.

3702:AT4G22580
gene id: 3702:AT4G22580
uniprot id: Q9SUW1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Expressed in roots, hypocotyls, cotyledons, leaves, stems, stamens and pollen grains.
messages: Functions in xyloglucan synthesis by adding side chains to the xylosylated glucan backbone. Involved in the galactosylation of hemicellulose xyloglucan.
messages: Golgi apparatus membrane

3702:AT1G72700
gene id: 3702:AT1G72700
uniprot id: A0A178WGF7
uniprot id: Q9SGG3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
messages: Involved in transport of phospholipids.
messages: Membrane

3702:AT1G18870
gene id: 3702:AT1G18870
uniprot id: A0A5S9V2Z1
uniprot id: F4IDX8
uniprot id: Q9M9V6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the isochorismate synthase family.
messages: Isochorismate synthase involved in the synthesis of salicylic acid (SA) required for both local and systemic acquired resistance (LAR and SAR) while SA synthesized through the phenylalanine ammonium lyase (PAL) pathway seems to potentiate plant cell death. Also involved in phylloquinone (vitamin K1) synthesis. Has no isochorismate pyruvate lyase (IPL) activity.
messages: No visible phenotype; due to the redundancy with ICS1. Mutants are not impaired in salicylic acid accumulation upon induction. Ics1 and ics2 double mutant is seedling lethal due to photosynthetic lesions induced by the lack of phylloquinone.
messages: chloroplast

3702:AT2G02100
gene id: 3702:AT2G02100
uniprot id: A0A178VVN9
uniprot id: Q39182
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Broadly expressed.
messages: Confers broad-spectrum resistance to pathogens.
messages: Secreted
messages: Was initially thought (Ref.2) to be a protease inhibitor.

3702:AT5G44520
gene id: 3702:AT5G44520
uniprot id: A0A1P8BDP5
uniprot id: A0A654G8U7
uniprot id: A0A7G2FDF6
uniprot id: Q9FI13
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ribose 5-phosphate isomerase family.
messages: Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT1G30380
gene id: 3702:AT1G30380
uniprot id: A0A178WI16
uniprot id: Q9SUI5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaG/PsaK family.
messages: Membrane
messages: chloroplast thylakoid membrane

3702:AT1G66120
gene id: 3702:AT1G66120
uniprot id: Q9C8D4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Butyrate--CoA ligase that is active in vitro with medium-chain fatty acids, with a preference for hexanoate and octanoate.
messages: Expressed in flowers.
messages: Peroxisome

3702:AT1G01880
gene id: 3702:AT1G01880
uniprot id: A0A178WE55
uniprot id: Q9LPD2
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the XPG/RAD2 endonuclease family. GEN subfamily.
messages: Binds 2 magnesium ions per subunit. They probably participate in the reaction catalyzed by the enzyme. May bind an additional third magnesium ion after substrate binding.
messages: Endonuclease which cleaves flap structures at the junction between single-stranded DNA and double-stranded DNA with a specific cleavage site in the 5' overhang strand exactly one nucleotide 3' of the branch point (PubMed:25037209). Structure- and sequence-specific nuclease that resolves holliday junctions (HJs) by symmetrically oriented incisions in two opposing strands near the junction point, thus leading to ligatable products; HJs are physical links between homologous DNA molecules that arise as central intermediary structures during homologous recombination and repair in meiotic and somatic cells (PubMed:25037209). Structure-specific nuclease with 5'-flap endonuclease activity, preferentially cleaving static flaps 5' overhang strand exactly one nucleotide in the 3' direction of the branch point (PubMed:25037209). Also able to cleave double-stranded flap strand 1 exactly at the branch point (PubMed:25037209).
messages: Normal sensitivity to DNA damaging agents (PubMed:26704385). Mild UV sensitivity in the gen1 send1 double mutant (PubMed:26704385).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G29300
gene id: 3702:AT4G29300
uniprot id: A0A178US97
uniprot id: Q9M0F1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G08570
gene id: 3702:AT1G08570
uniprot id: O64654
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family.
messages: The active site contains a CGGC motif wich differs from the conserved CGPC motif.
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. Possesses insulin disulfide bonds reducing activity.
messages: chloroplast

3702:AT1G80110
gene id: 3702:AT1G80110
uniprot id: Q949S5
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT2G29680
gene id: 3702:AT2G29680
uniprot id: O82387
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CDC6/cdc18 family.
messages: Cell cycle regulated. Up-regulated at the G1/S phase transition and then decreases rapidly as cells progress into S-phase (PubMed:11752380, PubMed:11669580). Degraded in a proteasome-dependent manner in proliferating cells, but not in endoreduplicating cells (PubMed:11752380).
messages: Cells expressing ectopically CDC6 have increased levels of endopolyploidy.
messages: Highly expressed in roots, flower buds and etiolated seedlings. Expressed in leaves and stems (PubMed:11604464). Highly expressed in proliferating cells such as root meristems, leaf primordia and young growing leaves, as well as cells undergoing endoreduplication cycles (PubMed:11752380).
messages: May be involved in the initiation of DNA replication. May play a role in endoreduplication. Could act as one of the factors that contributes to maintain endoreduplication competence.
messages: Nucleus

3702:AT3G23160
gene id: 3702:AT3G23160
uniprot id: A0A384L5C3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G03220
gene id: 3702:AT5G03220
uniprot id: Q9LYW3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 7 family.
messages: Component of the Mediator complex (PubMed:17560376, PubMed:22021418). Interacts with MEE14/CBP1 (PubMed:26462908).
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors.
messages: Nucleus

3702:AT1G67360
gene id: 3702:AT1G67360
uniprot id: A0A5S9WSI2
uniprot id: Q9FYF7
names: Similarity
messages: Belongs to the REF/SRPP family.

3702:AT1G10930
gene id: 3702:AT1G10930
uniprot id: Q8L840
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 3'-5' DNA helicase involved in DNA repair (PubMed:16146519, PubMed:18000056, PubMed:19096507). Required for the maintenance of genome stability by modulation of the DNA damage response and repression of crossovers. Confers resistance to genotoxic stress (PubMed:16146519, PubMed:18000056). Suppresses spontaneous homologous recombination (HR) events in somatic cells together with its partners RMI1 and TOP3A (PubMed:19096507). Contributes to the maintenance of chromosome integrity during meiosis. Involved in the removal of telomeric bridges that appear to arise during meiotic recombination. Required to resolve or dissolve MSH4-dependent telomeric associations. Does not seem required for chiasma formation (PubMed:21265901).
messages: Belongs to the helicase family. RecQ subfamily.
messages: By cold. Repressed by abscisic acid (ABA).
messages: Chromosome
messages: Enhanced sensitivity to genotoxic stress such as UV light, methyl methanesulfonate (MMS) and mitomycin C (MMC), and hyperrecombination (HR) during cell division.
messages: Expressed in roots, seedlings, young leaves, shoots, shoot apical mersitem, inflorescences, flowers, siliques and seeds.
messages: Nucleus

3702:AT5G50760
gene id: 3702:AT5G50760
uniprot id: A0A178UEA1
uniprot id: Q9LUE5
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT1G28510
gene id: 3702:AT1G28510
uniprot id: A0A654EDP4
uniprot id: Q9SGP9
names: Similarity
messages: Belongs to the OPA3 family.

3702:AT4G38390
gene id: 3702:AT4G38390
uniprot id: A0A178V2M6
uniprot id: Q9SVE6
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane
messages: Specifically expressed in the root hair.

3702:AT5G20580
gene id: 3702:AT5G20580
uniprot id: A0A654G2Z6
uniprot id: F4K5K3
uniprot id: Q0WP45
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM192 family.
messages: Membrane

3702:AT4G04920
gene id: 3702:AT4G04920
uniprot id: F4JGZ1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant Mediator complex subunit 16 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the regulation of the circadian clock, in the control of flowering time, in freezing- and osmotic-stress tolerance and in both salicylic acid- and jasmonate-mediated defense gene expression.
messages: Component of the Mediator complex.
messages: Late flowering in long days. Very low expression of cold-responsive (COR) genes.
messages: Not up- or down-regulated by cold.
messages: Nucleus

3702:AT1G27650
gene id: 3702:AT1G27650
uniprot id: Q9S709
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family.
messages: Component of the spliceosome. Homo- and heterodimer. Interacts with U2AF35B, RNU1 and SR45.
messages: Necessary for the splicing of pre-mRNA (By similarity). Probably active at the 3' splice sites.
messages: Nucleus speckle

3702:AT5G58530
gene id: 3702:AT5G58530
uniprot id: A0A178UBD7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G51990
gene id: 3702:AT5G51990
uniprot id: A0A654GB52
uniprot id: B2BJ26
uniprot id: Q9FJ93
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By high-salt stress, drought stress and abscisic acid (ABA) treatment.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation.

3702:AT1G21980
gene id: 3702:AT1G21980
uniprot id: Q56YP2
names: Function
names: Induction
names: PTM
names: Tissue Specificity
messages: By abscisic acid (ABA), drought and salt treatment.
messages: Catalyzes the synthesis of phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4-bisphosphate.
messages: Expressed in the whole plant, preferentially in roots. Strongly expressed in meristematic tissues, namely procambial cell layers.
messages: Phosphorylation inactivates the enzyme.

3702:AT3G16840
gene id: 3702:AT3G16840
uniprot id: A0A178VI73
uniprot id: A0A178VJW0
uniprot id: A0A384L6L8
uniprot id: Q93Y39
names: Caution
names: Domain
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily.
messages: RNA helicase.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G17560
gene id: 3702:AT4G17560
uniprot id: A0A178UTS8
uniprot id: Q8W463
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: Located at the 30S-50S ribosomal subunit interface and binds directly to 23S ribosomal RNA.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT4G34700
gene id: 3702:AT4G34700
uniprot id: A0A654FVK2
uniprot id: Q945M1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). Is required for correct plant growth and development.
messages: Belongs to the complex I LYR family.
messages: Complex I is composed of at least 49 different subunits.
messages: Expressed in roots, stems, flowers, rosette leaves, cauline leaves and siliques, with the highest expression in the stems.
messages: Mitochondrion inner membrane
messages: Shorter roots, smaller plants and delayed flowering.

3702:AT3G19580
gene id: 3702:AT3G19580
uniprot id: Q9SSW2
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By abscisic acid (ABA), ethylene, salt, cold, dehydration and the monovalent and divalent cations Li(+), Na(+), K(+), Cs(+), Ca(2+) and Mg(2+).
messages: Delayed senescence and hypersensitivity to ABA during seed germination.
messages: Expressed in roots, radicles, cotyledons, hypocotyls, leaf veins, stems, sepals, petals, stamens, placenta, funiculi and maturated seeds.
messages: Nucleus
messages: Plants overexpressing AZF2 have increased sensitivity to salt stress and barely survive under high salt conditions.
messages: Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. May act as a positive regulator of leaf senescence. Has been identified as a suppressor of the deficiency of yeast snf4 mutant to grow on non-fermentable carbon source.

3702:AT4G21260
gene id: 3702:AT4G21260
uniprot id: O49567
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Membrane

3702:AT1G50900
gene id: 3702:AT1G50900
uniprot id: Q8VY88
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Highly expressed in leaves and seedlings. Detected in roots, but not in germinating seeds.
messages: Interacts with CAO/cpSRP43, but is not a component of the transit complex. Interacts with LHCP (via T14 domain), TIC40 and TIC110.
messages: Involved in the import of light-harvesting complex proteins (LHCP) and subsequent routing of these proteins to the chloroplast signal recognition particle (SRP) pathway.
messages: Not able to grow photoautotrophically in soil. Pale green, slow growth and no bolting. No appressed grana in chloroplasts.
messages: Up-regulated by light.
messages: chloroplast envelope
messages: chloroplast stroma
messages: chloroplast thylakoid membrane

3702:AT5G26594
gene id: 3702:AT5G26594
uniprot id: A0A178UQL3
uniprot id: F4JZT3
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARR family. Type-A subfamily.
messages: Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.
messages: In flowers, levels are reaching a maximum in buds and open flowers before declining during pod development and maturation. Strongly expressed in pollen grains within the anthers of young and mature flowers. Occasionally present in the testa of developing seeds.
messages: Mostly expressed in flowers and siliques, primarily restricted to pollen grains.
messages: No visible phenotype.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT3G29130
gene id: 3702:AT3G29130
uniprot id: A0A1I9LNV2
uniprot id: F4J1T2
uniprot id: Q9LVP5
names: Similarity
messages: Belongs to the KXD1 family.

3702:AT4G02710
gene id: 3702:AT4G02710
uniprot id: Q9ZQX8
names: Function
names: Similarity
messages: Belongs to the NET family.
messages: Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex.

3702:AT1G78870
gene id: 3702:AT1G78870
uniprot id: A0A178WFI9
uniprot id: A0A1P8ARI0
uniprot id: A0A2H1ZEG2
uniprot id: Q94A97
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Required for postreplication repair of UV-damaged DNA and for adapting root developmental programs to suboptimal availability of iron.
messages: Interacts with yeast and human Mms2, with the RING domain of RGLG2 and with UEV1A, UEV1B, UEV1C and UEV1D.
messages: May be due to a competing donor splice site.
messages: May be due to an intron retention.
messages: No visible phenotype under normal growth conditions or in phosphate-deficient plants. Unable to form branched root hairs in response to iron-deficient conditions.
messages: Not induced by salt, abscisic acid, mannitol, H(2)O(2), low temperature, MMS or iron.
messages: Partly functionally redundant with UBC36.
messages: Ubiquitously expressed at low level. Mainly expressed in the vasculature.

3702:AT5G65205
gene id: 3702:AT5G65205
uniprot id: A0A654GFA1
uniprot id: Q944R2
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT1G74940
gene id: 3702:AT1G74940
uniprot id: Q8GRN0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FLZ family.
messages: Cytoplasm
messages: Down-regulated by NaCl.
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:24600465, PubMed:29945970). Interacts with KINB1, KINB2, KINB3 and SNF4 via its N-terminal part (PubMed:29945970).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.
messages: Nucleus

3702:AT5G10170
gene id: 3702:AT5G10170
uniprot id: Q9LX12
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the myo-inositol 1-phosphate synthase family.
messages: Cytoplasm
messages: Expressed in siliques, leaves, roots, seed endosperm, but not in embryos. Highest expression in roots. Confined to vascular tissue and hydathodes of leaves.
messages: Key enzyme in myo-inositol biosynthesis pathway that catalyzes the conversion of glucose 6-phosphate to 1-myo-inositol 1-phosphate in a NAD-dependent manner.
messages: Lethal when homozygous.

3702:AT5G16590
gene id: 3702:AT5G16590
uniprot id: Q9FMD7
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Induction of At5g16590 is not observed in mutants devoid of PII-2, another leucine-rich repeat protein normally associated with the plasma membrane microdomains.
messages: Might be involved in early recognition of growth promoting fungi. Appears to be specific for P.indica.
messages: The protein kinase domain is predicted to be catalytically inactive.
messages: Transiently up-regulated by the endophytic fungus Piriformospora indica.

3702:AT1G51470
gene id: 3702:AT1G51470
uniprot id: A0A178W999
uniprot id: Q3ECS3
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Hydrolyzes sinigrin and, with lower efficiency, p-nitrophenyl beta-D-glucoside.
messages: It seems that the absence of a catalytic proton donor in plant myrosinases is not impairing the hydrolysis of glucosinolates.
messages: Specifically expressed in roots.

3702:AT3G10820
gene id: 3702:AT3G10820
uniprot id: A0A2H1ZEG7
uniprot id: F4J4Y5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 26 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). May play a role in transcription elongation (By similarity).
messages: Component of the Mediator complex.
messages: Nucleus

3702:AT1G44542
gene id: 3702:AT1G44542
uniprot id: A0A178WG68
uniprot id: Q94LA9
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cyclase 1 superfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: extracellular matrix

3702:AT3G59310
gene id: 3702:AT3G59310
uniprot id: A0A1I9LRQ6
uniprot id: A0A654FJ66
uniprot id: F4J890
uniprot id: Q948Q9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC35F solute transporter family.
messages: Membrane

3702:AT2G02560
gene id: 3702:AT2G02560
uniprot id: Q8L5Y6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the CAND family.
messages: Developmental phenotypes such as dwarfism, organ defects, short inflorescences and mishaped leaves. Low fertility and reduced responses to hormones.
messages: Highly expressed in roots. Expressed in stems, flowers and siliques.
messages: Interacts with CUL1 and CUL4. Binds unneddylated CUL1, but cannot bind CUL1 once it has been neddylated.
messages: Key assembly factor of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes that promotes the exchange of the substrate-recognition F-box subunit in SCF complexes, thereby playing a key role in the cellular repertoire of SCF complexes. Acts as a F-box protein exchange factor (By similarity). Required for SCF(TIR1) function. Modulates SCF(TIR1) function through its interactions with the CUL1 subunit. Represses photomorphogenesis by promoting HY5 degradation in darkness.

3702:AT4G29670
gene id: 3702:AT4G29670
uniprot id: Q8LCT3
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family.
messages: May be due to an intron retention.
messages: The active site contains a CASC motif wich differs from the conserved CGPC motif.
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. Possesses insulin disulfide bonds reducing activity.
messages: chloroplast

3702:AT1G79850
gene id: 3702:AT1G79850
uniprot id: A0A178WN81
uniprot id: P16180
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS17 family.
messages: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA (By similarity). Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes (PubMed:22900828).
messages: Part of the 30S ribosomal subunit.
messages: Reduced plant size and pale green leaves.
messages: chloroplast

3702:AT1G75790
gene id: 3702:AT1G75790
uniprot id: A0A178WEI7
uniprot id: Q1PFD0
names: Similarity
messages: Belongs to the multicopper oxidase family.

3702:AT1G29060
gene id: 3702:AT1G29060
uniprot id: Q8L9S0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BET1 family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE associated with ER-derived vesicles (By similarity).

3702:AT3G58480
gene id: 3702:AT3G58480
uniprot id: A0A178VKX9
uniprot id: Q9M2G8
names: Caution
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By salt stress. Down-regulated by treatment with mannitol and lead.
messages: Cytoplasm
messages: Expressed in roots, rosette leaves, stems, flowers and siliques, and at lower levels in cauline leaves.
messages: May be involved in biotic and abiotic stress responses.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G15920
gene id: 3702:AT5G15920
uniprot id: Q9LFS8
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SMC family. SMC5 subfamily.
messages: Chromosome
messages: Core component of the SMC5-SMC6 complex that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
messages: Expressed in seedlings, rosette leaves and floral buds.
messages: Forms a heterodimer with SMC6A or SMC6B. The SMC5-SMC6 complex is composed of the SMC5 and SMC6 heterodimer attached via their hinge domain and from the non-SMC subunit NSE4A or NSE4B (By similarity).
messages: Lethal when homozygous.
messages: Nucleus
messages: The flexible hinge domain, which separates the large intramolecular coiled coil regions, allows the heterotypic interaction with the corresponding domain of SMC6, forming a V-shaped heterodimer.

3702:AT3G20670
gene id: 3702:AT3G20670
uniprot id: A0A178VAZ1
uniprot id: Q9LHQ5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Expressed mainly in non-dividing tissues of the plant. Also found in meristems and dividing cells.
messages: Not ubiquitinated.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3702:AT3G22275
gene id: 3702:AT3G22275
uniprot id: F4J078
names: Domain
names: Function
names: Induction
names: PTM
names: Subunit
messages: Monomer. Lack of homodimerization, and very weak or no interaction with AFPH2/NINJA and other JAZ proteins. Interacts (via EAR motif) with TPL. Interacts (via jas motif) with MYC2.
messages: Non-TIFY functional repressor of jasmonate (JA)-mediated growth and defense responses. Intrinsically resistant to JA-induced turnover, probably due to the absence of the canonical degron that strongly interacts with COI1 in the presence of JA-Ile in the TIFY/JAZ proteins.
messages: Phosphorylated at multiple serine residues.
messages: The jas motif (82-103) lacks the canonical degron LPIARR that strongly interacts with COI1 in the presence of JA-Ile in other TIFY/JAZ proteins. Contains 1 EAR motif required for the interaction with TPL.
messages: Up-regulated by mechanical wounding, and methyl jasmonate or coronatine treatments.

3702:AT5G66770
gene id: 3702:AT5G66770
uniprot id: Q9FL03
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in leaves, sepals, filaments of stamen, and in the central cylinder of the elongation zone in root.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT3G26610
gene id: 3702:AT3G26610
uniprot id: Q38958
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT1G68550
gene id: 3702:AT1G68550
uniprot id: A0A178WA98
uniprot id: Q9CA27
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G24120
gene id: 3702:AT1G24120
uniprot id: Q8VXV4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DnaJ family. B/II subfamily.
messages: Expressed constitutively in seedlings, roots, leaves, stems, flowers and siliques.
messages: Membrane
messages: Plays a continuous role in plant development probably in the structural organization of compartments (By similarity). Seems to not be involved in gravitropism signaling pathway.

3702:AT2G34660
gene id: 3702:AT2G34660
uniprot id: A0A1P8AZX4
uniprot id: Q42093
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: By 1-chloro-2,4-dinitrobenzene (CDNB).
messages: Interacts with FKBP42/TWD1 and probably with calmodulin (CaM).
messages: Membrane
messages: Pump for glutathione S-conjugates. Mediates the transport of S-conjugates such as GSH, S-(2,4-dinitrophenyl)-glutathione (DNP-GS), GSSG, cyanidin 3-glucoside-GS (C3G-GS) and metolachlor-GS (MOC-GS), glucuronides such as 17-beta-estradiol 17-(beta-D-glucuronide) (E(2)17betaG), and of the chlorophyll catabolite such as B.napus nonfluorescent chlorophyll catabolite (Bn-NCC-1).
messages: Reciprocal promotion of DNP-GS and E(2)17betaG uptake. E(2)17betaG uptake is also stimulated by GSH and S-methyl-glutathione (S-methyl-GS), and, to a lower extent, by GSSG and C3G-GS. Metolachlor-GS and decyl-GS slightly inhibit E(2)17betaG uptake.
messages: Ubiquitous, at low levels.
messages: Vacuole membrane

3702:AT1G01370
gene id: 3702:AT1G01370
uniprot id: A0A178WB57
uniprot id: Q8RVQ9
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H3 family.
messages: Expressed and/or deposited to centromeres during G2 phase.
messages: Forms a nucleosome-like histone octamer containing two molecules each of H2A, H2B, CENH3 and H4 assembled in one CENH3-H4 heterotetramer and two H2A-H2B heterodimers (By similarity). Interacts with ORTH2.
messages: Histone H3-like variant which exclusively replaces conventional H3 in the nucleosome core of centromeric chromatin at the inner plate of the kinetochore. Required for recruitment and assembly of kinetochore proteins, mitotic progression and chromosome segregation. May serve as an epigenetic mark that propagates centromere identity through replication and cell division (By similarity).
messages: The C-terminal histone fold domain is sufficient to direct CENH3 to centromeres.
messages: kinetochore

3702:AT1G79020
gene id: 3702:AT1G79020
uniprot id: A0A654EQA8
uniprot id: Q8GYQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enhancer of polycomb family.
messages: Nucleus

3702:AT4G28220
gene id: 3702:AT4G28220
uniprot id: A0A178UX29
uniprot id: A0A1P8B6J0
uniprot id: Q1JPL4
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activity is calcium-dependent with a more pronounced effect at higher pH.
messages: Alternative NADH-ubiquinone oxidoreductase which catalyzes the oxidation of mitochondrial NADH does not translocate protons across the inner mitochondrial membrane (By similarity). Calcium-dependent NAD(P)H dehydrogenase. Binds calcium ions.
messages: Belongs to the NADH dehydrogenase family.
messages: Binds 1 FAD per subunit.
messages: Expressed in seedlings, roots, cotyledons, leaves, stems, buds and flowers.
messages: Mitochondrion inner membrane
messages: Peroxisome

3702:AT1G09240
gene id: 3702:AT1G09240
uniprot id: A0A654E8E3
uniprot id: O80483
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the nicotianamine synthase (NAS)-like family.
messages: Constitutively expressed.
messages: In shoots.
messages: Synthesizes nicotianamine, a polyamine which serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.

3702:AT1G15810
gene id: 3702:AT1G15810
uniprot id: A0A654EFC9
uniprot id: Q9LMQ3
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Part of the 30S ribosomal subunit.

3702:AT4G28490
gene id: 3702:AT4G28490
uniprot id: P47735
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated on Ser, Thr and Tyr residues.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in roots and rosettes. Expressed at the base of petioles and pedicels, and in the abscission zones of the floral organs.
messages: Have significantly greater activity in the presence of Mn(2+) than Mg(2+).
messages: Interacts with CST (PubMed:21628627). Binds to IDA (PubMed:27058169).
messages: No visible phenotype; due to the redundancy with HSL2. Hae and hsl2 double mutants have a strong abscission defect.
messages: Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates that controls floral organ abscission. May interact with the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) ligands family.
messages: The name HAESA derives from a Latin word meaning 'to adhere to'.

3702:AT3G15750
gene id: 3702:AT3G15750
uniprot id: A0A1I9LP16
uniprot id: A0A1I9LP17
uniprot id: Q9LW04
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Nucleus

3702:AT4G14770
gene id: 3702:AT4G14770
uniprot id: A0A1P8B4Y7
uniprot id: A0A1P8B4Z6
uniprot id: F4JIF5
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the lin-54 family.
messages: Expressed at the late stage of pollen development in tricellular and mature pollen.
messages: No visible phenotype.
messages: Nucleus
messages: Plays a role in development of both male and female reproductive tissues.
messages: The cysteine-rich domain CRC binds zinc in vitro.
messages: Ubiquitous but expressed mostly in all the aerial organs with highest expression in flowers.

3702:AT3G24810
gene id: 3702:AT3G24810
uniprot id: Q9LRY0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CDI family. ICK/KRP subfamily.
messages: Expressed in flowers and at lower levels in roots and leaves.
messages: Inhibits CYCD2-1/CDKA-1 complex kinase activity without interaction with the complex.
messages: Interacts with CYCD4-1. Does not interact with CDKA-1.
messages: nucleoplasm

3702:AT3G51720
gene id: 3702:AT3G51720
uniprot id: A0A5S9XJX4
uniprot id: Q9SCT6
names: Similarity
messages: Belongs to the WEB family.

3702:AT3G12630
gene id: 3702:AT3G12630
uniprot id: A0A178VGK6
uniprot id: Q9LHJ8
names: Function
messages: May be involved in environmental stress response.

3702:AT2G33750
gene id: 3702:AT2G33750
uniprot id: A0A178W1P9
uniprot id: Q94GB1
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Competitive inhibition of adenine transport by isopentenyladenine, kinetin, benzylaminopurine, trans- and cis-zeatin and trans-zeatin riboside.
messages: Expressed in the vascular system of leaves. Restricted to the phloem. Expressed in flowers and roots and not detected in stems.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mediates adenine transport. May be involved in the uptake of cytokinin analogs.
messages: Membrane

3702:AT1G33760
gene id: 3702:AT1G33760
uniprot id: A0A654EEY4
uniprot id: Q9LQ28
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G10140
gene id: 3702:AT3G10140
uniprot id: Q8RY99
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Involved in recombination ability and DNA strand transfer activity.
messages: Mitochondrion

3702:AT2G14510
gene id: 3702:AT2G14510
uniprot id: Q9ZQR3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT5G23820
gene id: 3702:AT5G23820
uniprot id: Q9FF98
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Endoplasmic reticulum
messages: Induced by the diamond-back moth Plutella xylostella and the generalist herbivore Spodoptora littoralis (PubMed:23314818). Induced by jasmonate (JA) (PubMed:23314818, PubMed:23903439). Induced by wounding (PubMed:23903439). Down-regulated by salicylic acid (SA) (PubMed:23314818). Down-regulated by ethylene (PubMed:23903439).
messages: Interacts with RUB1/NEDD8.
messages: May be involved in herbivory-mediated responses. May play a role in herbivory-associated molecular pattern (HAMP) recognition. May function is jasmonate (JA) signaling in response to HAMP (PubMed:23314818). May play a role in defense response against the pathogens Altenaria brassicicola and Pseudomonas syringae (PubMed:23903439).
messages: Neddylated.
messages: Semi-dwarf phenotype.
messages: Transcriptionally regulated by NAI1, a transcription activator which mediates the formation of endoplasmic reticulum bodies (ER bodies). ER bodies are rod-shaped ER-derived structures produced by plants of the Brassicales order.
messages: Ubiquitinated.
messages: Vacuole

3702:AT1G05750
gene id: 3702:AT1G05750
uniprot id: Q9MA50
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: chloroplast

3702:AT4G26710
gene id: 3702:AT4G26710
uniprot id: A0A178UVG9
uniprot id: Q9SZ13
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase e1/e2 subunit family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: Subunit of the integral membrane V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity).
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).

3702:AT1G13980
gene id: 3702:AT1G13980
uniprot id: Q42510
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Acts as the major regulator of endosomal vesicle trafficking but is also involved in the endocytosis process. Could function redundantly with GNL1 in the retrograde Golgi to endoplasmic reticulum trafficking. Regulates vesicle trafficking required for the coordinated polar localization of auxin efflux carriers which in turn determines the direction of auxin flow. Mediates the sorting of PIN1 from endosomal compartments to the basal plasma membrane and the polarization of PIN3 to the bottom side of hypocotyl endodermal cells. Involved in the specification of apical-basal pattern formation in the early embryo and during root formation. Required for correct cell wall organization leading to normal cell adhesion during seedling development. Also plays an essential role in hydrotropism of seedling roots.
messages: Cell membrane
messages: Continually expressed in both embryogenesis and postembryonic organ development. Strongly expressed in actively dividing or elongating cells but only weakly or not at all in differentiated tissues other than the vasculature.
messages: Endosome membrane
messages: Homodimer. Interacts with CYP19-4/CYP5 in vitro.
messages: Inhibited by brefeldin A (BFA).
messages: Lack of morphological features of apical-basal polarity resulting of no root, no true hypocotyl and abnormal shoot apical meristem. Cell wall alterations. Defects in cell adhesion. Aberrant leaf venation.
messages: Stems, leaves, flowers, siliques, floral inflorescence and roots. Expressed in the whole plant (at the protein level).
messages: The DCB domain is required for both homodimerization and interaction with CYP protein. Heterotypic interaction of DCB domain with the N-terminal part of the SEC7 domain is required for membrane association and catalytic activity of the protein.
messages: cytosol

3702:AT5G53180
gene id: 3702:AT5G53180
uniprot id: Q9FGL9
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Plays a role in pre-mRNA splicing. Binds to the polypyrimidine tract of introns. May promote the binding of U2 snRNP to pre-mRNA (By similarity).

3702:AT5G17190
gene id: 3702:AT5G17190
uniprot id: A0A178UF43
uniprot id: Q9FFJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.

3702:AT4G37870
gene id: 3702:AT4G37870
uniprot id: A0A654FWY7
uniprot id: Q0WWL8
uniprot id: Q9T074
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates transiently in germinating seeds (at protein level) with a constant transcript level (PubMed:17283014). Abundant in cotyledons (mostly in senescing cotyledons) during post-germinative growth and in sink tissues, such as young leaves, developing flowers, siliques and seeds (at protein level) (PubMed:17283014, PubMed:19807880). In flowers, present in the nectaries, stigma, endocarp of the fruit wall and in tissues involved in the transfer of assimilates to the developing ovules and seeds, such as the vasculature and seed coat (at protein level) (PubMed:17283014).
messages: Allosterically activated by calcium. It may represent the only case of a monomeric, allosteric enzyme.
messages: Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Cytoplasm
messages: Expressed in cotyledons, flowers, siliques, seeds, leaves, stems and roots (PubMed:17283014). Localized in mid-veins (PubMed:19807880).
messages: Involved in the gluconeogenesis (PubMed:19807880). Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (PubMed:19807880).
messages: Monomer.
messages: Strongly reduced phosphoenolpyruvate carboxykinase activities in veins, leading to reduced alanine levels, which is derived from phosphoenolpyruvate (PEP) via pyruvate, but increased aspartate accumulation, derived from oxaloacetate.

3702:AT4G38830
gene id: 3702:AT4G38830
uniprot id: A0A654FWS1
uniprot id: Q9T0J1
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: May be due to intron retention.
messages: Membrane

3702:AT3G63120
gene id: 3702:AT3G63120
uniprot id: Q8LB60
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family. Cyclin U/P subfamily.
messages: Expressed in roots, stems and flowers. Expressed in the shoot apex, leaf primordia and young leaves.
messages: Interacts with CDKA-1 and CDKB1-1.

3702:AT3G62560
gene id: 3702:AT3G62560
uniprot id: A0A384KBH8
uniprot id: Q8VYP7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. SAR1 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Involved in transport from the endoplasmic reticulum to the Golgi apparatus.

3702:AT1G31140
gene id: 3702:AT1G31140
uniprot id: A0A178W639
uniprot id: Q9SA07
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in bud pedicels, petals, anthers, style, ovary, seeds and embryos.
messages: Forms homodimer (PubMed:20598091). Interacts with AGL16 (PubMed:20598091).
messages: Nucleus
messages: Plants over-expressing AGL63 are dwarf, have few rosette leaves with a curly-leaf phenotype, and display small disorganized floral structures and addition of carpel-like, resulting in small abnormal siliques with few seed production.
messages: Probable transcription factor involved in the regulation of fruit growth. Contributes to integument development. Controls organ size via cell expansion (PubMed:20088901). Involved in the regulation of longitudinal growth of the fruit evenly throughout the radial axis (PubMed:20598091). Functions redundantly with TT16/AGL32 to repress nucellus growth and promote its degeneration (PubMed:27233529).

3702:AT4G28500
gene id: 3702:AT4G28500
uniprot id: O49459
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in protoxylem and elongating interfascicular fiber cells of elongating internodes, developing metaxylem cells and interfascicular fibers of non-elongating internodes and developing secondary xylem of roots.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777, PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777).

3702:AT5G59010
gene id: 3702:AT5G59010
uniprot id: A8MQ88
uniprot id: Q9FIL1
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in roots, shoots, leaves, stems, flowers and siliques.
messages: Induced by salt stress, drought stress, cold stress, brassinosteroid and abscisic acid (ABA).
messages: Interacts with BRI1, BSK1, BSK6 and BSK8.
messages: Interacts with BRI1.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant seedlings exhibit enhanced sensitivity to salt stress and abscisic acid (ABA).
messages: Phosphorylated by BRI1, ASK7/BIN2 and ASK9/BIL2.
messages: Probable serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1 (PubMed:18653891). Involved in abiotic stress tolerance. Required for salt stress and abscisic acid-mediated drought stress tolerance (PubMed:22982312).
messages: Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.

3702:AT3G07090
gene id: 3702:AT3G07090
uniprot id: Q9SFT9
names: Similarity
messages: Belongs to the DeSI family.

3702:AT3G30775
gene id: 3702:AT3G30775
uniprot id: P92983
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the proline oxidase family.
messages: Converts proline to delta-1-pyrroline-5-carboxylate.
messages: Down-regulated by salt or drought stress. Up-regulated by proline, hypoosmolarity or rehydration (PubMed:17106685, PubMed:20403182, PubMed:9003320, PubMed:9847097). Activated by BZIP53 (PubMed:16810321).
messages: Mitochondrion
messages: No visible phenotype when grown under normal conditions. Proline hypersensitivity.
messages: Ubiquitous. Highest expression in pollen grains, in the stigma and in developing embryos.

3702:AT2G38025
gene id: 3702:AT2G38025
uniprot id: A0A178VRS1
uniprot id: A0A1P8B2M2
uniprot id: Q8GYW0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C85 family.
messages: Cytoplasm
messages: Hydrolase that can remove conjugated ubiquitin from proteins and may therefore play an important regulatory role at the level of protein turnover by preventing degradation.
messages: Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (PubMed:24659992). Cysteine protease with a preference for 'Lys-63' over 'Lys-48' over 'Met-1' -linked ubiquitin (UB) tetramers (e.g. Ub3 and Ub4) as substrates (PubMed:24659992). Cleaves also RUB-GST fusion (PubMed:24659992).

3702:AT1G51960
gene id: 3702:AT1G51960
uniprot id: Q9ZU28
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus
messages: Nucleus envelope
messages: cytoskeleton

3702:AT5G24140
gene id: 3702:AT5G24140
uniprot id: A0A2H1ZE80
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the squalene monooxygenase family.
messages: Catalyzes the stereospecific oxidation of squalene to (S)-2,3-epoxysqualene, and is considered to be a rate-limiting enzyme in steroid biosynthesis.
messages: Membrane

3702:AT5G42080
gene id: 3702:AT5G42080
uniprot id: A0A178UEJ4
uniprot id: F4K015
uniprot id: P42697
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
messages: Cell membrane
messages: Cytoplasm
messages: Forms homodimer and may homooligomerize and heterooligomerize to form the phragmoplastin complex (PubMed:20171176, PubMed:20231465). Interacts with AGD3/VAN3. May interact with CALS1. Binds to AHK2. Binds to SH3P2 (PubMed:28584166). Forms a complex made of SH3P2 and DRP1A and triggers its accumulation at the cell plate (PubMed:28584166). Interacts with DRP2B at the plasma membrane and in forming clathrin-coated vesicles (CCV) (PubMed:20231465). Binds to PHIP1 (PubMed:18621982).
messages: Microtubule-associated force-producing protein that is targeted to at the leading edges of the forming cell plate during cytokinesis (PubMed:18612642). Also plays a major role in plasma membrane maintenance and cell wall integrity with implications in vesicular trafficking, polar cell expansion, vascular formation, and other aspects of plant growth and development, including stigmatic papillae expansion (PubMed:18256049, PubMed:18344418). Collaboratively with DRP2B, participates in clathrin-coated vesicle formation during endocytosis (PubMed:20231465). Necessary for BOR1 polar localization in low-boron (B) conditions as well as for BOR1 endocytosis and subsequent degradation under high-concentration of boron (PubMed:27449211). Has a GTPase activity (PubMed:20171176). Required for the sterols-dependent dynamic high lipid order observed at the cell plate of dividing cells (PubMed:25234576). Together with SH3P2, converts the fused vesicles to tubular structures at the cell plate and phragmoplasts during cytokinesis (PubMed:28584166, PubMed:18256049). With DRP2B and PIP5K3, required for the precise coordination of polar ARAC3/ROP6 and ARAC4/ROP2 placement and subsequent root hair positioning during planar polarity formation in root hair-forming cells, probably by mediating the correct basal-to-planar polarity switching of D6PK into the polar, lipid-enriched domain (PubMed:27251533). Involved in endocytosis required for cellulose deposition during cell wall formation and elongation (PubMed:18256049). Interacts with plasma membrane-mimetic liposomes and induces their clustering (PubMed:20171176).
messages: Ubiquitous. Expressed in leaves (at protein level).
messages: Vascular discontinuity (PubMed:15923323, PubMed:18344418). Short and swollen roots and hypocotyls due to cellulose-deficient walls associated with increased levels of arabinose, xylose, and galactose in non-cellulosic polysaccharides (PubMed:18256049). Infertility due to the inability of stigmatic papillae to undergo rapid polar expansion prior to fertilization (PubMed:18344418). The alteration of cell wall formation correlates with abnormal phragmoplasts and division plates in dividing cells, as well as reduced cell elongation and disturbed endocytosis (PubMed:18256049). Hypersensitivity to trafficking inhibitors (e.g. brefeldin A, monensin A and latrunculin B) (PubMed:18256049). Both basal and apical shift of ARAC3/ROP6 and ARAC4/ROP2 positioning and broad lateral localization of D6PK in root hair-forming cells leading to basal and apical shift of root hair positions (PubMed:27251533).
messages: cell cortex
messages: clathrin-coated vesicle
messages: cytoskeleton
messages: phragmoplast

3702:AT4G37770
gene id: 3702:AT4G37770
uniprot id: Q56Y32
uniprot id: Q9T065
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: 1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes catalyze the conversion of S-adenosyl-L-methionine (SAM) into 1-aminocyclopropane-1-carboxylate (ACC), a direct precursor of ethylene.
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: By indole-3-acetic acid (IAA) and cycloheximide (CHX).
messages: Expressed in roots. Expressed at low level in flowers and siliques.
messages: Homodimer and heterodimer. In vivo, the relevance of heterodimerization with other ACS enzymes is however unsure (By similarity). Interacts with GRF3.
messages: May be processed at its C-terminus.
messages: The stability of ACS proteins, and the regulation of such stability, play a central role in ethylene biosynthesis.

3702:AT5G51280
gene id: 3702:AT5G51280
uniprot id: A0A178U9F4
uniprot id: Q9LU46
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX41 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G78490
gene id: 3702:AT1G78490
uniprot id: A0A178WMR8
uniprot id: Q8VZC2
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G28490
gene id: 3702:AT3G28490
uniprot id: A0A654FI26
uniprot id: F4J0A8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P4HA family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G27880
gene id: 3702:AT3G27880
uniprot id: A0A384KMP9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02440
gene id: 3702:AT1G02440
uniprot id: A0A1P8AVU2
uniprot id: F4HXI5
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3702:AT5G64000
gene id: 3702:AT5G64000
uniprot id: A0A1P8BGY0
uniprot id: O49623
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the inositol monophosphatase superfamily.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP. May regulate the flux of sulfur in the sulfur-activation pathway by converting PAPS to APS (PubMed:10205895) (By similarity). Prevents both the toxicity of PAP on RNA processing enzymes as well as the product inhibition by PAP of sulfate conjugation. Is also able to hydrolyze inositol 1,4-bisphosphate (PubMed:10205895).
messages: Inhibited by Li(+) (IC(50)=10 millimolar), Na(+) (IC(50)=200 millimolar) and Ca(2+) (IC(50)=0.03 millimolar).
messages: Substrate preference is 3'-phosphoadenosine 5'-phosphate (PAP) > adenosine 3'-phosphate 5'-phosphosulfate (PAPS)>> inositol 1,4-bisphosphate. No activity observed against 3' or 5'-AMP, inositol monophosphate and fructose-1,6-bisphosphate.
messages: Very low expression in roots, leaves, stems, flowers and siliques.

3702:AT1G15640
gene id: 3702:AT1G15640
uniprot id: A0A178WND0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10320
gene id: 3702:AT1G10320
uniprot id: Q9SY74
names: Sequence Caution
messages: Intron retention.

3702:AT3G43570
gene id: 3702:AT3G43570
uniprot id: Q9FYD3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G28890
gene id: 3702:AT3G28890
uniprot id: A0A654FBW2
uniprot id: Q9LJW7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Membrane

3702:AT4G22970
gene id: 3702:AT4G22970
uniprot id: Q5IBC5
names: Disruption Phenotype
names: Function
names: Tissue Specificity
messages: Cleaves SYN1, releasing sister chromatid cohesion. Required for the release of cohesin at anaphase I and anaphase II, whereas the release of cohesin during diplotene and diakinesis occurs in a separase-independent process. Essential for embryo and endosperm development. May play a role in centromeric heterochromatin structure/formation during early meiosis, non-homologous centromere association and radial microtubule system (RMS) formation. May regulate the mitosis-specific cyclin CYCB1-1.
messages: Embryo lethality. Embryos arrested at the globular stage, no cellularization of endosperm nuclei and enlargment of many nuclei and nucleoli resulting in a titan-like phenotype.
messages: Expressed in roots, stems, leaves and buds.

3702:AT5G11150
gene id: 3702:AT5G11150
uniprot id: A0A178UF45
uniprot id: A0A1P8BEB3
uniprot id: A0A5S9Y409
uniprot id: Q9LFP1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the synaptobrevin family.
messages: Highly expressed in stems and roots. Detected in flowers and leaves.
messages: Interacts with subunits of the vacuole protein sorting (HOPS) complex including VPS11, VCL1, VPS18, VPS33, VPS39 and VPS41.
messages: Involved in the targeting and/or fusion of transport vesicles to their target membrane.
messages: Prevacuolar compartment membrane
messages: The longin domain is critical for the vacuolar localization.
messages: Vacuole membrane

3702:AT5G16540
gene id: 3702:AT5G16540
uniprot id: Q8L7N8
names: Miscellaneous
names: Subcellular Location Annotation
messages: May be due to a competing donor splice site.
messages: May be due to intron retention.
messages: Nucleus

3702:AT1G12310
gene id: 3702:AT1G12310
uniprot id: Q94AZ4
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.5, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT1G15380
gene id: 3702:AT1G15380
uniprot id: Q9XI31
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in response to abiotic stresses such as cold, heat, drought, oxidative stress, genotoxic compounds, wounding, osmotic stress and UV-B (PubMed:21213008). Slightly induced by salt (NaCl) and nickel ions Ni(2+) (PubMed:30483284, PubMed:21213008). Strongly induced by methylglyoxal (MG) (PubMed:31652571).
messages: Belongs to the glyoxalase I family.
messages: Cell membrane
messages: Cytoplasm
messages: General stress phenotype, characterized by compromised methylglyoxal (MG) scavenging, accumulation of reactive oxygen species (ROS), stomatal closure, and reduced fitness associated with reduced leaf area and dry weight, as well as prolonged flowering time (PubMed:31652571). Increased susceptibility to the pathogenic fungus Plectospherella cucumerina which triggers mainly the jasmonate (JA)-mediated defense signaling pathway (PubMed:31652571). Abnormal cross-talk between salicylic acid (SA) and jasmonic acid (JA) signaling pathways (PubMed:29852537).
messages: Involved in the detoxification and scavenging of methylglyoxal (MG), a cytotoxic aldehyde produced in response to primary metabolism alteration observed during biotic and abiotic stresses (PubMed:31652571). Modulates cross-talk between salicylic acid (SA) and jasmonic acid (JA) signaling pathways during defense responses to pathogens such as Botrytis cinerea (PubMed:29852537).
messages: Mostly expressed in roots, and, to a lower extent, in leaves, flowers, seeds and siliques.

3702:AT1G51970
gene id: 3702:AT1G51970
uniprot id: Q9ZU26
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G43700
gene id: 3702:AT5G43700
uniprot id: A0A384LA06
uniprot id: P33077
uniprot id: Q0WTK3
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers (By similarity). Interacts with TPL.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: Preferentially expressed in stems, leaves and flowers.
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT5G57100
gene id: 3702:AT5G57100
uniprot id: A0A178UPQ9
uniprot id: A0A1P8BHP7
uniprot id: A0A1R7T3B1
uniprot id: A0A1R7T3B2
uniprot id: Q9LU76
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT2G39855
gene id: 3702:AT2G39855
uniprot id: A0A384LD93
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G25475
gene id: 3702:AT5G25475
uniprot id: Q680D9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G54540
gene id: 3702:AT3G54540
uniprot id: Q9M1H3
names: Similarity
messages: Belongs to the ABC transporter superfamily. ABCF family. EF3 (TC 3.A.1.121) subfamily.

3702:AT1G76400
gene id: 3702:AT1G76400
uniprot id: A0A178WGG6
uniprot id: A0A1P8AUN1
uniprot id: Q9SFX3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OST1 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT1G58725
gene id: 3702:AT1G58725
uniprot id: F4IBF0
uniprot id: P0DI15
uniprot id: Q3ECM4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G10450
gene id: 3702:AT3G10450
uniprot id: A0A178V9Y2
uniprot id: A0A178VAE4
uniprot id: A0A1I9LLH5
uniprot id: A0A384KB05
uniprot id: F4J3S3
uniprot id: Q9SQX6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Probable carboxypeptidase.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT1G05020
gene id: 3702:AT1G05020
uniprot id: A0A5S9SMH7
uniprot id: Q9ZVN6
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Binding of AP180 to clathrin triskelia promotes their assembly into 70-90 nm coats cages.
messages: Golgi apparatus
messages: Interacts with ALPHAC-AD and clathrin.
messages: Vesicle
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT1G13830
gene id: 3702:AT1G13830
uniprot id: A0A178WQX2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35370
gene id: 3702:AT2G35370
uniprot id: A0A178VV72
uniprot id: P25855
names: Activity Regulation
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Highly expressed in leaves, lower expression in green veins, petioles, and stems, and detected in roots.
messages: Inhibited by harpin, S-nitrosoglutathione (GSNO), nitric oxide, N-ethylmaleimide and 5,5'-dithiobis-(2-nitrobenzoic acid).
messages: Mitochondrion
messages: S-nitrosylated and/or glutathionylated at unknown positions in response to nitric oxide.
messages: The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.
messages: The glycine decarboxylase (GDC) or glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: Up-regulated by light.

3702:AT3G56270
gene id: 3702:AT3G56270
uniprot id: Q9LYL6
names: Similarity
messages: Belongs to the WEB family.

3702:AT5G44750
gene id: 3702:AT5G44750
uniprot id: A3EWL3
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-Y family.
messages: Deoxycytidyl transferase involved in DNA repair and translesion synthesis (TLS). Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. Mediates also the insertion of dTMP or dGMP when the opposite base is G, and, with a low efficiency, dGMP insertions opposite G, T, and C, dAMP insertions opposite G, A, and T, and dTMP insertion opposite A. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (e.g. UV and gamma ray), mostly via G to T transversions, and of spontaneous mutations in somatic cells. Confers resistance to ultraviolet-B (UV-B) and various DNA cross-linkers (e.g. mitomycin C MMC and cisplatin). Promotes stem growth.
messages: Mn(2+) ions. Can also use Mg(2+) ions with a lower efficiency.
messages: Monomer.
messages: Nucleus
messages: Reduced UV light- and gamma ray-induced mutation frequency. Slightly sensitive to ultraviolet-B (UV-B) and DNA cross-linkers (e.g. mitomycin C MMC and cisplatin). Lower germination rate.
messages: The C-terminal domain is necessary for protein interactions.

3702:AT1G18030
gene id: 3702:AT1G18030
uniprot id: Q9LMT1
names: Cofactor
names: Miscellaneous
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: May be due to a competing donor splice site.

3702:AT5G22400
gene id: 3702:AT5G22400
uniprot id: Q9FMR1
names: Function
messages: Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state.

3702:AT3G20080
gene id: 3702:AT3G20080
uniprot id: A0A384KIF5
uniprot id: F4JDH7
uniprot id: Q9LJZ2
names: Caution
names: Similarity
messages: Belongs to the cytochrome P450 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G61030
gene id: 3702:AT5G61030
uniprot id: Q9FNR1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GR-RBP family.
messages: Homodimer (PubMed:25800738). Interacts with ORRM2 and MORF8/RIP1 (PubMed:25800738). Interacts with RBG5/ORRM4 (PubMed:26578708). Binds to RBG2/ORRM5 (PubMed:28549172).
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit severe editing defects in mitochondrial transcripts.
messages: Possibly has a role in RNA transcription or processing during stress (By similarity). Involved in C-to-U editing of mitochondrial RNA. Functions as minor mitochondrial editing factor. Controls 6 percent of the mitochondrial editing sites (PubMed:25800738).
messages: Up-regulated by cold stress.

3702:AT5G55820
gene id: 3702:AT5G55820
uniprot id: A0A1P8BE37
uniprot id: A0A1P8BE52
uniprot id: A0A1P8BE53
uniprot id: A0A1P8BE54
uniprot id: A0A1P8BE57
uniprot id: A0A1P8BE61
uniprot id: A0A1P8BE62
uniprot id: A0A1P8BE82
uniprot id: G3GBK1
uniprot id: Q9FM57
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the INCENP family.
messages: Nucleus
messages: spindle

3702:AT3G46613
gene id: 3702:AT3G46613
uniprot id: A0A654FHF4
uniprot id: Q6IM86
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT2G04860
gene id: 3702:AT2G04860
uniprot id: Q9SJ73
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT5G63580
gene id: 3702:AT5G63580
uniprot id: A0A178U9U9
uniprot id: A0A1P8BGI0
uniprot id: B2GVM7
names: Caution
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Could be the product of a pseudogene. Possesses a truncated Fe2OG dioxygenase domain which lacks 1 iron binding site.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G38030
gene id: 3702:AT5G38030
uniprot id: Q9LS19
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT1G34360
gene id: 3702:AT1G34360
uniprot id: A0A1P8AU23
uniprot id: A0A1P8AU34
uniprot id: Q6NLP2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-3 family.
messages: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
messages: Mitochondrion
messages: Monomer.

3702:AT3G07690
gene id: 3702:AT3G07690
uniprot id: A0A654F6R5
uniprot id: Q9S785
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Compromised in systemic acquired resistance (SAR) triggered by Pseudomonas syringae DC3000 avrRpt2 probably because of a reduced accumulation of glycerol-3-phosphate (G3P).
messages: Cytoplasm
messages: Homodimer.
messages: Required for glycerol-3-phosphate (G3P) accumulation during systemic acquired resistance (SAR) establishment.

3702:AT1G77360
gene id: 3702:AT1G77360
uniprot id: A0A178W4X3
uniprot id: Q9FVX2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G05590
gene id: 3702:AT5G05590
uniprot id: A0A1P8B9M1
uniprot id: A0A1P8B9P1
uniprot id: Q42527
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TrpF family.
messages: By silver nitrate and UV irradiation.
messages: Expressed in roots and shoots.
messages: Sequencing errors.
messages: chloroplast

3702:AT1G71180
gene id: 3702:AT1G71180
uniprot id: Q949M8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HIBADH-related family. 3-hydroxyisobutyrate dehydrogenase subfamily.
messages: Mitochondrion

3702:AT1G67490
gene id: 3702:AT1G67490
uniprot id: F4HTM3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 63 family.
messages: Cleaves the distal alpha 1,2-linked glucose residue from the Glc(3)Man(9)GlcNAc(2) oligosaccharide precursor. Required for the accumulation of seed storage proteins, the formation of protein bodies, cell differentiation, cellulose biosynthesis and organization (in cell walls), cell shape determination and organization (e.g. epidermal cells), and embryo development. Involved in root development.
messages: Constitutively expressed in roots, stems, leaves, flowers and siliques.
messages: Embryonic lethal. Impaired glucosidase activity leading to a strongly reduced cellulose content. Abnormal shrunken seeds with embryos arrested at the heart stage. Low levels of storage proteins in seeds accompanied by a loss of protein bodies, abnormal cell enlargement and occasional cell wall disruptions.
messages: Endoplasmic reticulum membrane

3702:AT1G58602
gene id: 3702:AT1G58602
uniprot id: Q8W3K0
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Compromised RPP7-dependent immunity leading to an increased sporulation of the incompatible Hyaloperonospora arabidopsidis (downy mildew) Hpa-Hiks1 isolate, but normal resistance to Hpa-Cala2 and Hpa-Cand5 isolates in cv. Col-5 background; full susceptibility to these isolates is observed in cv. Wassilewskija background.
messages: Disease resistance protein required for incompatible interactions with avirulent strains of Hyaloperonospora arabidopsidis (downy mildew), isolate Hpa-Hiks1 in cv. Columbia.
messages: In cv. Columbia, regulated epigenetically by EDM2 (e.g. alternative polyadenylation (APA) resulting from cooption of epigenetic information at the TE insertion locus COPIA-R7) to accumulate upon Hyaloperonospora arabidopsidis isolate Hiks1 infection.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT5G28850
gene id: 3702:AT5G28850
uniprot id: Q5QIT3
names: Disruption Phenotype
names: Function
names: Subunit
messages: No visible phenotype.
messages: PP2A consists of a common heterodimeric core enzyme, composed of a 36 kDa catalytic subunit (subunit C) and a 65 kDa constant regulatory subunit (PR65 or subunit A), that associates with a variety of regulatory subunits. Proteins that associate with the core dimer include three families of regulatory subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) and cell signaling molecules. Interacts with HMGR1L and HMGR1S (via N-terminus), but not with HMG2. Interacts with PP2AA1.
messages: Regulatory subunit of type 2A protein phosphatase. Involved in post-transcriptional regulation of HMGR but not in root growth regulation in response to salt.

3702:AT4G27970
gene id: 3702:AT4G27970
uniprot id: A0A178V1C3
uniprot id: A0A1P8B3D9
uniprot id: A0A1P8B3E4
uniprot id: Q9ASQ7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SLAC1 S-type anion channel family.
messages: Cell membrane
messages: Expressed in lateral root primordia and tap root tips.
messages: Homotrimer.
messages: Membrane
messages: Slow, weak voltage-dependent S-type anion efflux channel involved in maintenance of anion homeostasis.

3702:AT4G09620
gene id: 3702:AT4G09620
uniprot id: F4JK28
uniprot id: Q9SST2
names: Similarity
messages: Belongs to the mTERF family.

3702:AT5G06270
gene id: 3702:AT5G06270
uniprot id: Q9FNI1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as negative regulator of root hair development redundantly with GIR2 (PubMed:28526410). GIR1 and GIR2 may function as adapter proteins that associate with GL2 and participate in the control of root hair formation (PubMed:28526410). GIR1 and GIR2 may function as adapter proteins that associate with TPL and participate in the repression of root gene expression (PubMed:28526412).
messages: Expressed in root and shoot meristems.
messages: Interacts with GL2 (PubMed:28526410). Interacts with TPL (PubMed:28526412).
messages: No visible phenotype under normal growth conditions, but the double mutant seedlings gir1 and gir2 exhibit excessive root hair formation.
messages: Nucleus
messages: Seedlings overexpressing GIR1 exhibit reduced root hair formation.

3702:AT4G26370
gene id: 3702:AT4G26370
uniprot id: A0A654FSY8
uniprot id: Q93XY7
names: Similarity
messages: Belongs to the NusB family.

3702:AT2G21630
gene id: 3702:AT2G21630
uniprot id: A0A178VR60
uniprot id: Q9SIJ7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SEC23/SEC24 family. SEC23 subfamily.
messages: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
messages: COPII-coated vesicle membrane
messages: Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER) (By similarity). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity).
messages: Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.
messages: Component of the coat protein complex II (COPII), composed of at least five proteins: the Sec23/24 complex, the Sec13/31 complex and Sar1.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G03350
gene id: 3702:AT5G03350
uniprot id: Q9LZF5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the leguminous lectin family.
messages: Cell membrane
messages: Expressed in seedlings and leaves of adult plants.
messages: Plays a positive role in the effector-triggered immunity (ETI) response (PubMed:19199050, PubMed:24006883). Involved in salicylic acid (SA)-mediated processes occurring in ETI response, but is not involved in the autophagy process (PubMed:24006883). Promotes systemic rather than local immunity (PubMed:24755512). Essential for systemic acquired resistance (SAR), but not necessary for immune signaling downstream of SA (PubMed:24755512). May act in parallel with SA (PubMed:24755512).
messages: Strongly induced locally by salicylic acid (SA) (PubMed:17496105, PubMed:24755512). Completely dependent on NPR1 for early up-regulation by SA (PubMed:19199050). Up-regulated upon avirulent pathogen infection via an SA-mediated pathway (PubMed:19199050, PubMed:24006883). Up-regulated locally and systematically during systemic acquired resistance (SAR) (PubMed:24755512). The local induction is independent of EDS1 while the systemic transcriptional regulation is EDS1-dependent (PubMed:24755512).
messages: apoplast

3702:AT2G42960
gene id: 3702:AT2G42960
uniprot id: A0A178VT32
uniprot id: A0A1P8B253
uniprot id: Q9SJG2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT3G59380
gene id: 3702:AT3G59380
uniprot id: A0A7G2EVB1
uniprot id: B3LF91
uniprot id: Q9LX33
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein prenyltransferase subunit alpha family.
messages: Essential subunit of both the farnesyltransferase and the geranylgeranyltransferase complex. Contributes to the transfer of a farnesyl or geranylgeranyl moiety from farnesyl or geranylgeranyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X.
messages: Heterodimer of an alpha and a beta subunit.

3702:AT4G30930
gene id: 3702:AT4G30930
uniprot id: A0A178UZG0
uniprot id: Q8L9A0
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Component of the mitochondrial ribosome large subunit.
messages: Constitutively expressed in roots, stems, leaves, flowers, pistils and siliques.
messages: Failure of fusion of the polar nuclei during megagametogenesis and abnormal double fertilization; fails to undergo fusion of the outer nuclear membranes.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: This protein binds to 23S ribosomal RNA in the presence of protein L20 (By similarity). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus, and during double fertilization of the egg cell and the central cell (PubMed:16698901).

3702:AT3G55840
gene id: 3702:AT3G55840
uniprot id: Q9LY61
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Interacts with SNF4.
messages: Positive regulator of basal resistance.

3702:AT1G33930
gene id: 3702:AT1G33930
uniprot id: Q9C8V0
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. IAN subfamily.
messages: Mostly expressed in pollen. Also detected in lateral roots and radicles.
messages: Up-regulated by brassinolides. Down-regulated by 2-aminoethoxyvinylglycine (AVG), high CO(2), isoxaben, and propiconazole treatments.

3702:AT1G51780
gene id: 3702:AT1G51780
uniprot id: Q9SWX9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M20 family.
messages: Endoplasmic reticulum lumen
messages: Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA).

3702:AT1G63480
gene id: 3702:AT1G63480
uniprot id: A0A1P8AU89
uniprot id: Q8LPN5
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer. Interacts with AHL27, AHL29 and ATAF2/NAC081.
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT1G30680
gene id: 3702:AT1G30680
uniprot id: B5X582
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds two Mg(2+) per subunit.
messages: Expressed in young leaves and shoot apex tissues. Detected in developing tissues such as cotyledons, sepals, pistils and inflorescences. Nearly undetectable in mature leaves.
messages: Has both DNA primase and DNA helicase activities and may be involved in organelle DNA replication. Capable of producing RNA primers of 9 to 18 bases from a single-stranded DNA template.
messages: Mitochondrion
messages: chloroplast

3702:AT1G52780
gene id: 3702:AT1G52780
uniprot id: A0A178WME6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G24440
gene id: 3702:AT4G24440
uniprot id: A0A384K8P8
uniprot id: Q39236
uniprot id: Q53YU1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFIIA subunit 2 family.
messages: Nucleus
messages: TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation.
messages: TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with TBP mediates transcriptional activity (By similarity).
messages: TFIIA is a heterodimer of the large unprocessed subunit 1 and a small subunit gamma. It was originally believed to be a heterotrimer of an alpha, a beta and a gamma subunit (By similarity).

3702:AT2G48110
gene id: 3702:AT2G48110
uniprot id: F4IN69
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Mediator complex subunit 33 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator.
messages: Component of the Mediator complex.
messages: No visible phenotype.
messages: Nucleus
messages: Ubiquitous.

3702:AT2G42360
gene id: 3702:AT2G42360
uniprot id: Q9SLC3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8, UBC10, UBC11, UBC28, UBC29, UBC30, UBC35 and UBC36 in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G03700
gene id: 3702:AT1G03700
uniprot id: A0A178WAG7
uniprot id: Q9LR57
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT1G70030
gene id: 3702:AT1G70030
uniprot id: A0A1P8AQ30
uniprot id: A0A1P8AQ85
uniprot id: Q84R24
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G19330
gene id: 3702:AT2G19330
uniprot id: O64566
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the SHOC2 family.
messages: Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.
messages: Widely expressed.

3702:AT3G10110
gene id: 3702:AT3G10110
uniprot id: A0A1I9LRE4
uniprot id: A0A1I9LRE5
uniprot id: A0A5S9XAW5
uniprot id: A2RVP7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family.
messages: Embryo lethality.
messages: Essential core component of the TIM22 complex, a complex that mediates the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane.
messages: Expressed in young cotyledons, roots, flowers and leaves.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Up-regulated after antimycin A or rotenone treatments.

3702:AT2G47330
gene id: 3702:AT2G47330
uniprot id: O22907
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT5G13480
gene id: 3702:AT5G13480
uniprot id: Q6NLV4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: At globular stage, expressed throughout the embryo, endosperm and surrounding maternal seed tissue. From the heart-stage, expression restricted to the embryo and the funiculus.
messages: Embryo lethal.
messages: Expressed in embryos, in shoot and root meristems and in the vasculature.
messages: Interacts transiently (via the PPLPP motifs) with FCA (via the WW domain). Interacts with CPSF73-I, CPSF73-II, CPSF100 and CPSF160 in the CPSF complex. The FCA/FY interaction leads to changes in FY/CPSF complex composition.
messages: Nucleus
messages: Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for the negative autoregulation of FCA expression. Acts probably as an RNA 3' end-processing factor. Required for growth and development in plants.

3702:AT2G38280
gene id: 3702:AT2G38280
uniprot id: A0A178VY66
uniprot id: O80452
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: AMP deaminase plays a critical role in energy metabolism. Essential for the transition from zygote to embryo.
messages: Activated by ATP. Activated by sulfate ions (in vitro). Inhibited by phosphate ions.
messages: Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in both male and female gametophytes, at the zygote stage, in the endosperm, and during early embryo development. Observed in cotyledonary embryos and in the basal part of the embryo, but not in the suspensor or in mature embryos. Also expressed during somatic embryogenesis.
messages: Expressed in seedlings, roots, leaves, flowers, pollen grains, pollen tubes and siliques, and at a lower level in stems.
messages: Homodimer. Interacts with AHK4. Interacts with EER5 (PubMed:19843313).
messages: Intron retention.
messages: Membrane
messages: Microsome membrane

3702:AT2G22310
gene id: 3702:AT2G22310
uniprot id: A0A178W1M0
uniprot id: A0A1P8AYX2
uniprot id: F4IJH1
uniprot id: Q8LAM0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase C19 family.
messages: Constitutively and ubiquitously expressed.
messages: Nucleus
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Required for the correct development of pollen.

3702:AT5G27410
gene id: 3702:AT5G27410
uniprot id: A0A178UDJ3
uniprot id: Q9ASR4
names: Caution
names: Similarity
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G05490
gene id: 3702:AT5G05490
uniprot id: A0A654FZ23
uniprot id: Q9S7T7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the rad21 family.
messages: Component of the cohesin complex.
messages: Involved in chromosome condensation, pairing and segregation during meiosis. Responsible for cohesion between replicated sister chromatids.
messages: Isoform 2 is expressed at low levels in buds, leaves and roots, whereas expression of isoform 1 is confined to buds.
messages: Nucleus

3702:AT4G32730
gene id: 3702:AT4G32730
uniprot id: Q9S7G7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in the columella root cap. Also present in floral organs in young flower buds. Strongly expressed in vascular tissues of filaments and anthers. Weakly and uniformly present in the developing embryo and maternal tissues (PubMed:17287251). Expressed both in proliferating and maturing stages of leaves (PubMed:26069325).
messages: Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells.
messages: Constant levels during cell cycle. Activated by CYCB1.
messages: Expressed ubiquitously at low levels (PubMed:10743663). Expressed in roots, cotyledons, flowers and leaves, especially in vascular tissues (PubMed:17287251).
messages: Nucleus
messages: The double mutant myb3r1 myb3r4 often fails to complete cytokinesis, resulting in multinucleate cells with gapped walls and cell wall stubs in diverse tissues (e.g. in embryo during the first or second division after fertilization, in stomata guard mother cell) and several pleiotropic developmental defects, and associated with the selective reduction of several G2/M phase-specific genes transcript levels (e.g. CYCB2, CDC20.1 and KNOLLE). Hypersensitivity to caffeine, an inhibitor of cytokinesis (PubMed:17287251, PubMed:21862669). In triple mutant myb3r1 myb3r3 myb3r5, up-regulation of many G2/M-specific genes leading to larger seeds, organs and embryos due to overproliferation and ectopic cell divisions (PubMed:26069325).
messages: Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (PubMed:21862669). Transcription activator involved in the regulation of cytokinesis, probably via the activation of several G2/M phase-specific genes transcription (e.g. KNOLLE) (PubMed:17287251, PubMed:21862669). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells (PubMed:26069325). Required for the maintenance of diploidy (PubMed:21862669).

3702:AT5G04120
gene id: 3702:AT5G04120
uniprot id: F4KI56
names: Caution
names: Function
names: Similarity
messages: Belongs to the phosphoglycerate mutase family.
messages: Phosphoglycerate mutase-like protein lacking PGM activity, but having a low metal-independent phosphoserine phosphatase activity in vitro. May be involved in serine biosynthesis.
messages: The full-length coding region has been amplified by RT-PCR and sequenced, but not submitted to the EMBL/GenBank/DDBJ databases.

3702:AT3G15270
gene id: 3702:AT3G15270
uniprot id: Q9S758
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Expressed in the inflorescence apical meristem and young flowers.
messages: Increases during floral transition and stay high thereafter.
messages: Negatively regulated by microRNAs miR156.
messages: Nucleus
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Promotes both vegetative phase change and flowering.

3702:AT5G15600
gene id: 3702:AT5G15600
uniprot id: A0A178U7W0
uniprot id: Q9LF22
names: Function
names: Similarity
names: Tissue Specificity
messages: Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
messages: Belongs to the SPIRAL1 family.
messages: Ubiquitous.

3702:AT1G18560
gene id: 3702:AT1G18560
uniprot id: A0A178W351
uniprot id: F4ICA1
names: Caution
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G58760
gene id: 3702:AT5G58760
uniprot id: A0A1P8BFU8
uniprot id: A0A5S9YHN1
uniprot id: Q6NQ88
names: Caution
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although the DWD box motif has been suggested to mediate interaction of DDB2 with DDB1A, mutagenesis experiments have to date failed to demonstrate a role for this motif.
messages: Belongs to the WD repeat DDB2/WDR76 family.
messages: Component of the UV-DDB complex, which is composed of DDB1A and DDB2. Interacts with CUL4.
messages: Expressed in roots and flowers. Expressed at low levels in stems.
messages: Induced transiently by UV-B.
messages: Interblade loops of the WD repeat region mediate most of the interaction with DNA. A hairpin between blades 5 and 6 inserts into DNA minor groove and mediates recognition of lesions and separation of the damaged and undamaged strands (By similarity).
messages: May function as the substrate recognition module for a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex including DDB1A and CUL4 (By similarity). Required for DNA repair. Binds to DDB1A to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair (PubMed:18551167). Involved in UV-B tolerance and genome integrity. In association with ATCSA-1, is necessary for repair of UV-B-induced DNA lesions (PubMed:20128879).
messages: Nucleus
messages: The DWD box is required for interaction with DDB1A.

3702:AT1G63090
gene id: 3702:AT1G63090
uniprot id: A0A178W4F1
uniprot id: Q9CAN4
names: Caution
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1.
messages: The F-box is necessary for the interaction with ASK proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G16500
gene id: 3702:AT2G16500
uniprot id: A0A654ETA4
uniprot id: Q9SI64
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
messages: Homodimer. Only the dimer is catalytically active, as the active sites are constructed of residues from both monomers. May form a head-to-tail homodimer (PubMed:11576438). Homodimer and heterodimer with ADC2 (PubMed:28109885).
messages: Increased levels of lateral root branching.
messages: Induced by freezing (PubMed:18701673). Induced by the bacterial pathogen Pseudomonas viridiflava (PubMed:25409942).
messages: Required for the biosynthesis of putrescine. Catalyzes the first step of polyamine (PA) biosynthesis to produce putrescine from arginine (PubMed:11576438, PubMed:15733873, PubMed:25409942). Is a minor contributor to basal arginine decarboxylase (ADC) activity and putrescine biosynthesis (PubMed:25409942). Accumulation of putrescine plays a positive role in freezing tolerance (PubMed:18701673). Production of polyamines is essential for normal seed development (PubMed:15733873). Controls PA homeostasis which is crucial for normal plant growth and development (PubMed:27014322).
messages: chloroplast
messages: cytosol

3702:AT1G75720
gene id: 3702:AT1G75720
uniprot id: A0A178WM76
uniprot id: F4I0N3
names: Caution
names: Similarity
messages: Belongs to the WEB family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G43910
gene id: 3702:AT5G43910
uniprot id: A0A1P8BG22
uniprot id: A0A654G8N5
uniprot id: F4K7C7
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.

3702:AT3G58490
gene id: 3702:AT3G58490
uniprot id: A0A178VD76
uniprot id: Q9M2G7
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type 2 lipid phosphate phosphatase family.
messages: Endoplasmic reticulum membrane
messages: Functions as sphingoid long-chain base phosphate (LCBP) phosphatase. May play a role in the regulation of LCBP levels and be involved in stomatal responses through LCBP-mediated ABA signaling.
messages: No visible phenotype under normal growth conditions, but mutant plants show increased sensitivity to ABA in stomatal closure and decreased sensitivity to ABA-induced inhibition of primary root growth.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G44525
gene id: 3702:AT2G44525
uniprot id: A0A5S9X6Y2
uniprot id: Q8RUX8
names: Function
names: Subcellular Location Annotation
messages: Essential factor for the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
messages: Membrane
messages: Mitochondrion inner membrane
messages: Nucleus

3702:AT3G19640
gene id: 3702:AT3G19640
uniprot id: A0A178VLJ7
uniprot id: Q9LJN2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.
messages: Expressed in the whole plant.
messages: Has the ability to complement a mutant in yeast lacking magnesium transport capability.
messages: Magnesium transporter that may mediate the influx of magnesium.
messages: Membrane

3702:AT3G59070
gene id: 3702:AT3G59070
uniprot id: Q9LYS9
names: Cofactor
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: DOMON domain could bind catecholamines and thereby could regulate the cytochrome b561 domain function (PubMed:15022831). DOMON domain could bind one heme b (PubMed:19386804).
messages: May act as a catecholamine-responsive trans-membrane electron transporter.
messages: Membrane

3702:AT1G77932
gene id: 3702:AT1G77932
uniprot id: A0A178WKM8
uniprot id: Q1G3W3
names: Similarity
messages: Belongs to the fantastic four family.

3702:AT1G07870
gene id: 3702:AT1G07870
uniprot id: Q9LQQ8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: May be involved in plant defense signaling.
messages: Palmitoylation at Cys-3 and Cys-6 are required for plasma membrane location.

3702:AT4G01940
gene id: 3702:AT4G01940
uniprot id: Q93W77
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NifU family.
messages: Homodimer; disulfide-linked.
messages: Molecular scaffold for [Fe-S] cluster assembly of chloroplastic iron-sulfur proteins.
messages: Predominantly expressed in floral stalks and siliques. Expressed in leaves, cauline leaves, flower stalks and flowers (at protein level).
messages: chloroplast stroma

3702:AT5G07100
gene id: 3702:AT5G07100
uniprot id: A0A654FZJ4
uniprot id: Q0V871
uniprot id: Q9C5T3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WRKY group I family.
messages: By salicylic acid (PubMed:11449049). Induced by heat stress (PubMed:21336597).
messages: Interacts with VQ10.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Functions with WRKY25 and WRKY33 as positive regulator of plant thermotolerance by partially participating in ethylene-response signal transduction pathway (PubMed:21336597).

3702:AT1G32850
gene id: 3702:AT1G32850
uniprot id: Q9MAQ3
names: Function
names: Similarity
messages: Belongs to the peptidase C19 family.
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).

3702:AT4G12360
gene id: 3702:AT4G12360
uniprot id: Q9STH5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Probable lipid transfer protein.

3702:AT3G24290
gene id: 3702:AT3G24290
uniprot id: A0A5S9XF69
uniprot id: Q9LK16
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: Involved in ammonium transport.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT5G47560
gene id: 3702:AT5G47560
uniprot id: Q8LG88
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC13A/DASS transporter (TC 2.A.47) family.
messages: Expressed in leaves, stems and flowers.
messages: Induced by malate and by acidification of the cytoplasm.
messages: Putative carrier protein indirectly involved in the uptake of malate and fumarate to the vacuole, probably by regulating the energization across the tonoplast. Uptake of malate to vacuoles is inhibited by citrate and by the uncoupler carbonyl-cyanide m-chlorophenylhydrazone, but seems to be not affected by sodium. Critical for pH homeostasis.
messages: Vacuole membrane

3702:AT2G34900
gene id: 3702:AT2G34900
uniprot id: Q84XV2
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Barely detectable in stems, leaves, siliques, and dry seeds, but was present at considerable levels in roots, flowers and imbibited seeds.
messages: Down-regulated during germination.
messages: During seed imbibition.
messages: Impaired cotyledon greening during germination. Seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination. Mature plants appear normal.
messages: Nucleus
messages: The NET domain could serve as an interface to localize different proteins or complexes to chromatin.
messages: Transcription activator that plays a role in the promotion of seed germination by both negatively and positively regulating the abscisic acid (ABA) and phytochrome A (phyA) transduction pathways, respectively.

3702:AT4G20645
gene id: 3702:AT4G20645
uniprot id: P0CJ60
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT5G46330
gene id: 3702:AT5G46330
uniprot id: C0LGU8
uniprot id: Q9FL28
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: After flg22-binding, forms instantaneously a heteromeric complex with BAK1 and is transphosphorylated within 15 seconds. After activation, the receptor is internalized by endocytosis and subject to degradation.
messages: Autophosphorylated. The phosphorylated form is essential in the perception of flagellin. Dephosphorylated by KAPP. Autophosphorylation is inhibited by the binding with avrPto1.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Both extracellular leucine-rich repeats and protein kinase domains are required for flg22-binding. The LRR 9 to LRR 15 domains are involved in flg22-binding.
messages: Cell membrane
messages: Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 or to the phosphatase hopD2 from Pseudomonas syringae blocks the downstream plant immune response.
messages: Endosome membrane
messages: Heterodimer with SERK3/BAK1 (PubMed:24114786, PubMed:17626179, PubMed:20103591, PubMed:21693696, Ref.32). The activation by flagellin (flg22) induces the dissociation of the complex with SERK3/BAK1 (Ref.32, PubMed:20413097). Interacts with KAPP. Does not form homodimer. Interacts with SERK3/BAK1, SERK4/BKK1, SERK1 and SERK2 in a specific ligand-induced manner. Interacts with P.syringae AvrPto1, AvrPtoB and (via the kinase and cytoplasmic domains) hopD2. Component of large complexes containing, at least, FLS2 and ACD6 in endoplasmic reticulum and plasma membrane (PubMed:24923602). Interacts with MORC1/CRT1 (PubMed:23250427). Interacts with PBS1, BIK1, PBL1 and PBL2 (PubMed:20413097). Interacts with RBOHD (PubMed:24629339). Binds to IOS1 which triggers FLS2-BAK1 complex formation upon microbe-associated molecular patterns (MAMPs) treatment (PubMed:27317676). Interacts with PCRK1 and PCRK2 (PubMed:27208222). Interacts with BSK1 (PubMed:23532072). Interaction with BSK8 (PubMed:21726371).
messages: Impaired BIK1 pathogen-associated molecular patterns (PAMPs e.g. flg22)-induced ubiquitination.
messages: Polyubiquitinated at the kinase domain mediated by P.syringae AvrPtoB.
messages: Repressed upon infection with the P.syringae virulent DC3000 strain, in a flg22- and avrPtoB-dependent manner (at protein level).
messages: Ubiquitously expressed.

3702:AT1G55320
gene id: 3702:AT1G55320
uniprot id: Q84P17
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Expressed in flowers.
messages: May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth.
messages: No visible phenotype under normal growth conditions, but plants are resistant to 2,4-DB.
messages: Peroxisome

3702:AT5G64380
gene id: 3702:AT5G64380
uniprot id: A0A1S5M0M6
uniprot id: Q9FMF1
names: Caution
names: Similarity
messages: Belongs to the FBPase class 1 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G24881
gene id: 3702:AT1G24881
uniprot id: A0A178W943
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G28130
gene id: 3702:AT1G28130
uniprot id: A0A178WH43
uniprot id: Q9FZ87
names: Function
names: Induction
names: Miscellaneous
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin. Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val. Appears to favor Glu over Asp while the other GH3 favor Asp over Glu. Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys. Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA). The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates.
messages: May be due to an intron retention.
messages: Not induced by auxin.

3702:AT1G19250
gene id: 3702:AT1G19250
uniprot id: A0A654EG77
uniprot id: Q9LMA1
names: Function
names: Induction
names: Similarity
messages: Belongs to the FMO family.
messages: Locally and systemically up-regulated by the bacterial pathogen P.syringae.
messages: Required for the establishment of systemic acquired resistance (SAR). Not involved in local defense mechanisms. Confers a salicylic acid-dependent (SA) resistance to virulent pathogens such as P.syringae pv tomato and H.parasitica.

3702:AT1G12400
gene id: 3702:AT1G12400
uniprot id: A0A178WKZ4
uniprot id: A0A1P8AR18
uniprot id: Q6NNM0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFB5 family.
messages: Component of the 7-subunit TFIIH core complex composed of XPB, XPD, TFB1/GTF2H1, GTF2H2/P44, TFB4/GTF2H3, TFB2/GTF2H4 and TFB5/GTF2H5, which is active in NER. The core complex associates with the 3-subunit CDK-activating kinase (CAK) module composed of CYCH1/cyclin H1, CDKD and MAT1/At4g30820 to form the 10-subunit holoenzyme (holo-TFIIH) active in transcription.
messages: Component of the 7-subunit TFIIH core complex.
messages: Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription.
messages: In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape.
messages: Nucleus

3702:AT4G14180
gene id: 3702:AT4G14180
uniprot id: A0A178V135
uniprot id: O23277
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in flower buds.
messages: Interacts with SPO11-1 (PubMed:17762870, PubMed:28855712). According to PubMed:28855712, may interact with SPO11-2; this is in contradiction with PubMed:9461215 which claims that it seems to not interact with SPO11-2 (PubMed:28855712, PubMed:17762870). Binds to DFO, PRD3 and MTOPVIB (PubMed:28855712). Facilitates an interaction between PRD3 and DFO (PubMed:28855712).
messages: Involved in DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination.
messages: Nucleus
messages: Plants exhibit reduced fertility and meiotic defects (PubMed:17762870). Drastic decrease in chiasma formation at metaphase I associated with an absence of synapsis in prophase, due to the inability to make double-strand breaks (DSB) (PubMed:19763177).
messages: The N-terminal domain (1-802) but not the C-terminal domain (755-1330) is essential for interaction with SPO11-1.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26880
gene id: 3702:AT3G26880
uniprot id: A0A178V9L5
uniprot id: Q9LW22
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G30240
gene id: 3702:AT1G30240
uniprot id: A8MQA6
uniprot id: Q0WV78
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RIX1/PELP1 family.
messages: Nucleus

3702:AT5G67370
gene id: 3702:AT5G67370
uniprot id: Q9FN15
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates progressively upon iron deficiency.
messages: Membrane
messages: Mostly expressed in seeds, leaves and flowers, and, to a lower extent, in roots.
messages: Required for growth in low iron conditions.
messages: Stronger growth defect in iron-deficient conditions.
messages: chloroplast

3702:AT2G45130
gene id: 3702:AT2G45130
uniprot id: Q5PP62
names: Function
names: Induction
messages: Plays a positive role in plant adaptation to phosphate starvation and exerts negative feedback regulation of SPX1.
messages: Up-regulated under phosphate starvation.

3702:AT1G73330
gene id: 3702:AT1G73330
uniprot id: Q39091
names: Function
names: Induction
names: Similarity
messages: Belongs to the protease inhibitor I3 (leguminous Kunitz-type inhibitor) family.
messages: Exhibits Kunitz trypsin protease inhibitor activity.
messages: Induced by infestation with spider mites (PubMed:30042779). Down-regulated in roots in response to drought stress (PubMed:7823904).

3702:AT4G04780
gene id: 3702:AT4G04780
uniprot id: C0LU16
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 21 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Required for embryo development and defense against necrotrophic fungal pathogens.
messages: Component of the Mediator complex. Interacts with HUB1.
messages: Embryonic lethal.
messages: Nucleus

3702:AT5G22630
gene id: 3702:AT5G22630
uniprot id: A0A178UL55
uniprot id: Q9FNJ8
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine.
messages: Expressed in roots, leaves, stems, flowers and siliques. More abundant in stems and roots.
messages: Has no detectable prehenate dehydratase activity.
messages: Strongly up-regulated during stem elongation.
messages: chloroplast stroma

3702:AT5G11520
gene id: 3702:AT5G11520
uniprot id: A0A178UKY4
uniprot id: P46644
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Amino acid aminotransferase important for the metabolism of amino acids and Krebs-cycle related organic acids. No activity with D-Asp or D-Ala as amino donors. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: By ethylene and dark.
messages: Expressed in roots, cauline leaves, flowers, hypocotyl epidermis and root hair cells.
messages: Homodimer.
messages: In eukaryotes there are cytoplasmic, mitochondrial and chloroplastic isozymes.
messages: Up-regulated in leaves during natural senescence.
messages: chloroplast

3702:AT2G15090
gene id: 3702:AT2G15090
uniprot id: A0A5S9WY70
uniprot id: Q4V3C9
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Endoplasmic reticulum membrane
messages: Expressed in leaves and seedlings.
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Down-regulated by darkness, low temperature, drought and osmotic stress (PubMed:18465198).

3702:AT1G34260
gene id: 3702:AT1G34260
uniprot id: Q9XID0
names: Caution
names: Function
names: Subunit
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Lacks the FYVE domain, necessary to efficiently target the protein to membranes containing the phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity).

3702:AT4G29660
gene id: 3702:AT4G29660
uniprot id: Q94K18
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G18480
gene id: 3702:AT4G18480
uniprot id: A0A178UXM0
uniprot id: P16127
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mg-chelatase subunits D/I family.
messages: Homozygous mutants are chlorotic lethal when grown on soil, but can grow on sucrose-containing medium.
messages: Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
messages: Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. The magnesium-chelatase is a complex of three subunits, CHLI, CHLD and CHLH. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP-dependent chelation step. Possesses high affinity for ATP and may play a major role in chlorophyll biosynthesis. Does not bind abscisic acid (ABA), but is a positive regulator of ABA signaling.
messages: Not regulated by light.
messages: Redox regulation; active in reducing conditions, inactive in oxidizing conditions.
messages: Redox regulation; active in reducing conditions, inactive in oxidizing conditions. Thioredoxins f and m mediate the reversible reductive activation of oxidized CHLI1.
messages: The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD and CHLH. Interacts with CHLH and CHLD.
messages: The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD, AND CHLH.
messages: chloroplast

3702:AT2G32720
gene id: 3702:AT2G32720
uniprot id: A0A178VXM5
uniprot id: A0A1P8AX49
uniprot id: O48845
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b5 family.
messages: Endoplasmic reticulum membrane
messages: Interacts with CER1, FAH1, FAH2 and BI-1.
messages: Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases, including fatty acid desaturases.

3702:AT1G20860
gene id: 3702:AT1G20860
uniprot id: A0A1P8AWF0
uniprot id: Q9SYQ1
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although related to the sugar transporter family, it does not transport sugars.
messages: Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.
messages: High-affinity transporter for external inorganic phosphate.
messages: In roots.
messages: Membrane
messages: Slightly induced in roots during phosphate starvation.

3702:AT3G01540
gene id: 3702:AT3G01540
uniprot id: A0A654F363
uniprot id: Q8H136
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.
messages: Belongs to the DEAD box helicase family.
messages: Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.
messages: Down-regulated by abscisic acid (ABA), salt and cold treatments.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: Ubiquitous. Preferentially expressed in flowers and roots.

3702:AT5G44340
gene id: 3702:AT5G44340
uniprot id: A0A178UGW7
uniprot id: P24636
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: There are nine genes coding for beta-tubulin.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: cytoskeleton

3702:AT5G15230
gene id: 3702:AT5G15230
uniprot id: A0A5S9Y4L6
uniprot id: A8MQL8
uniprot id: P46690
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GASA family.
messages: By gibberellins.
messages: Expressed in flower buds, style, stamen filaments, vasculature of petals, root phloem, vasculature of cotyledons and rosette leaves and developing embryo.
messages: Gibberellin-regulated protein involved in the regulation of floral meristem and floral organ identity, and promotion of seed size and weight. May play a role in the promotion of gibberellin responses such as regulation of flowering under short-day conditions, seed germination and inhibition of gibberellin oxidase. Possesses redox activity in E.coli and may function in redox regulation in planta.
messages: Increased number of axillary inflorescence shoots and decreased seed weight.
messages: Secreted
messages: Six disulfide bonds may be present.

3702:AT1G02720
gene id: 3702:AT1G02720
uniprot id: Q9FWY9
uniprot id: W8Q7E9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.

3702:AT5G40610
gene id: 3702:AT5G40610
uniprot id: Q9SCX9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Expressed in young seedlings, flowers and siliques. Expressed at low levels in roots.
messages: Involved in glycerolipid metabolism.
messages: chloroplast

3702:AT3G15060
gene id: 3702:AT3G15060
uniprot id: Q9LK99
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT5G19830
gene id: 3702:AT5G19830
uniprot id: A0A178UFB4
uniprot id: Q6NLS8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PTH family.
messages: Mitochondrion
messages: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. May also be required for the splicing of group IIB introns in mitochondria (By similarity).

3702:AT1G63070
gene id: 3702:AT1G63070
uniprot id: Q9CAN6
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: May be due to intron retention.
messages: Mitochondrion

3702:AT1G35435
gene id: 3702:AT1G35435
uniprot id: Q2V4I9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G26680
gene id: 3702:AT4G26680
uniprot id: Q9SZ10
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G29680
gene id: 3702:AT1G29680
uniprot id: A0A178WMK9
uniprot id: Q9C7N3
names: Similarity
messages: Belongs to the OBAP family.

3702:AT1G73880
gene id: 3702:AT1G73880
uniprot id: Q9C9B0
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses quercetin 3-O-glucosyltransferase, 7-O-glucosyltransferase and 4'-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives.

3702:AT3G44310
gene id: 3702:AT3G44310
uniprot id: A0A384KJ08
uniprot id: C0SVD5
uniprot id: P32961
uniprot id: Q8LFU8
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family.
messages: Can convert indole-3-acetonitrile to the plant hormone indole-3-acetic acid.
messages: Expressed in cotyledons, hypocotyls, leaves, roots, stems, flowers and siliques.
messages: Expressed throughout development, but at a very low level during the fruiting stage.
messages: Interacts with DEK3.
messages: Produced by alternative initiation at Met-7 of isoform 1.

3702:AT1G06225
gene id: 3702:AT1G06225
uniprot id: A0A178WPP4
uniprot id: Q3EDH8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate.
messages: Mostly expressed in roots, stems and apex, and, to a lower extent, in seedlings, leaves, flowers, siliques and pollen.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-78 enhances binding affinity of the CLE3p peptide for its receptor.
messages: extracellular space

3702:AT3G29410
gene id: 3702:AT3G29410
uniprot id: Q9LIA1
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: Involved in terpene biosynthesis in roots. Possesses sesquiterpene (C15) synthase activity in vitro. Does not seem to be involved in diterpene (C20) biosynthesis.
messages: Predominantly expressed in roots but also in flowers.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT5G43820
gene id: 3702:AT5G43820
uniprot id: P0C8R0
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT4G01650
gene id: 3702:AT4G01650
uniprot id: A0A1P8B4E3
uniprot id: Q84VW2
uniprot id: Q9M120
names: Function
names: Similarity
names: Subunit
messages: Belongs to the COQ10 family.
messages: Interacts with coenzyme Q.
messages: Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.

3702:ArthCp080
gene id: 3702:ArthCp080
uniprot id: A0A1B1W502
uniprot id: P56753
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: Folded specifically by a chaperonin Cpn60 complex containing at least 1 Cpn60 beta 4 subunit.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus (By similarity). Interacts with the chaperonin CNP60B4 subunit.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3702:AT2G39270
gene id: 3702:AT2G39270
uniprot id: A0A178VLJ8
uniprot id: Q84JF7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family.
messages: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
messages: Monomer.
messages: chloroplast

3702:AT2G35340
gene id: 3702:AT2G35340
uniprot id: F4IJV4
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. PRP2 sub-subfamily.
messages: Embryo defective. Arrested at one-cell zygotic stage.
messages: May be involved in pre-mRNA splicing.
messages: Predominantly expressed in flowers.

3702:AT5G59320
gene id: 3702:AT5G59320
uniprot id: A0A178UNU9
uniprot id: Q9LLR7
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

3702:AT3G51130
gene id: 3702:AT3G51130
uniprot id: Q9SD33
names: Similarity
messages: Belongs to the PHAF1 family.

3702:AT4G24580
gene id: 3702:AT4G24580
uniprot id: F4JQZ3
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. Maintains the global inactivation of ARAC11/ROP1 at the apex in pollen tubes in order to regulate the polar cell growth.
messages: Cell membrane
messages: Expressed in pollen and pollen tubes.
messages: Interacts with ARAC11/ROP1.
messages: Male gametophyte defect characterized by sterile pollen grains developing balloon-like tubes.

3702:AT5G63640
gene id: 3702:AT5G63640
uniprot id: A0A178USH8
uniprot id: Q9FFQ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TOM1 family.
messages: Cytoplasm
messages: Membrane
messages: Might contribute to the loading of the ESCRT machinery.
messages: Preferentially expressed in siliques and cauline leaves.

3702:AT1G17700
gene id: 3702:AT1G17700
uniprot id: A0A5S9UVA5
uniprot id: Q9FZ63
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PRA1 family.
messages: Endosome membrane
messages: Expressed in hypocotyls, leaf bases and shoot apex.
messages: Interacts with PRA1F2.
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane

3702:AT5G25180
gene id: 3702:AT5G25180
uniprot id: A0A654G407
uniprot id: P58051
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT2G30020
gene id: 3702:AT2G30020
uniprot id: A0A5S9X2J0
uniprot id: F6LPR5
uniprot id: O80871
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: By wounding.
messages: Cytoplasm
messages: High jasmonate production and PDF1.2 expression upon wounding. Slight reduction of lesion size caused by fungal pathogen. Slight decrease of spider mite reproductive performance.
messages: Interacts with MPK4 and MPK6.
messages: Nucleus
messages: Protein phosphatase that negatively regulates defense respones. Inactivates MPK4 and MPK6 MAP kinases involved in stress and defense signaling.

3702:AT3G18100
gene id: 3702:AT3G18100
uniprot id: A0A384LQA7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G10890
gene id: 3702:AT3G10890
uniprot id: Q9SG94
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 5 (cellulase A) family.
messages: Expressed in leaves, flowers, siliques and seeds.
messages: Secreted

3702:AT2G37710
gene id: 3702:AT2G37710
uniprot id: A0A5S9X5E3
uniprot id: O80939
names: Similarity
names: Subcellular Location Annotation
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Membrane

3702:AT1G15190
gene id: 3702:AT1G15190
uniprot id: Q5Q0H2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: May be a cell surface adhesion protein.
messages: Secreted

3702:AT5G61920
gene id: 3702:AT5G61920
uniprot id: A0A178USJ6
uniprot id: A0A1P8BFA1
uniprot id: Q9FH51
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the FLX family.
messages: Early flowering.
messages: Interacts with FRI.
messages: Involved in FLC activation and flowering time control, but has no transcriptional activation activity. Probably part of the FRI-C complex, but is not redundant with FLX.

3702:AT4G33350
gene id: 3702:AT4G33350
uniprot id: Q9SZB2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Tic22 family.
messages: Involved in protein precursor import into chloroplasts. Imported into the intermembrane space via the Toc translocon. May be involved in the import pathway used by proteins without a cleavable N-terminal pre-sequence (By similarity).
messages: Part of the Tic complex (By similarity). Interacts with OEP61 during its transport into the intermembrane space.
messages: chloroplast intermembrane space

3702:AT2G23610
gene id: 3702:AT2G23610
uniprot id: A0A178VT29
uniprot id: A0A1P8B0R3
uniprot id: O80477
names: Caution
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Methylesterase shown to have carboxylesterase activity, methyl indole-3-acetic acid (MeIAA) esterase activity and methyl jasmonate (MeJA) esterase activity in vitro.
messages: Methylesterase.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G33040
gene id: 3702:AT4G33040
uniprot id: A0A178V3R3
uniprot id: Q8L9S3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).

3702:AT3G43505
gene id: 3702:AT3G43505
uniprot id: A0A178VH95
uniprot id: P82745
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Expressed in flower buds, but not in stems, roots or rosette leaves.
messages: Secreted

3702:AT5G48700
gene id: 3702:AT5G48700
uniprot id: A0A5S9YEI6
uniprot id: Q9FKC6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Cytoplasm
messages: Interacts with SAE2, SCE1, SIZ1 and MMS21 Covalently attached to a number of proteins.
messages: Nucleus
messages: Stress conditions rapidly and substantially elevates the amount of SUMO1 and SUMO2 conjugates with a concomitant reduction in the amount of free SUMO proteins. The SUMO conjugation system plays an important function in stress protection and/or repair.
messages: Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity).

3702:AT4G25570
gene id: 3702:AT4G25570
uniprot id: A0A178UZ09
uniprot id: A0A384LK01
uniprot id: Q8L856
names: Cofactor
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds 2 heme b groups non-covalently.
messages: Expressed in roots, seedlings and leaves. Lower expression in flowers. Expressed in the L1 layer of the shoot apex, in the epidermis of leaf primordia and young leaves and in vascular bundles. In the differentiation zone of the root, detected in the pericycle and in the epidermis, but not in the cortex. Strongly expressed in the lateral part of the root cap and in the epidermis of the root tip, but not in the meristematic tissue. Not expressed in lateral roots. In mature embryos, expressed in the epidermis, cotyledon tips and root tips.
messages: Homodimer.
messages: Membrane
messages: Strong reduction in expression levels in flowers following fertilization.
messages: Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane ferric-chelate reduction. Able to use dihydrolipoic acid (DHLA) as an alternative substrate to ascorbate.
messages: Vacuole membrane

3702:AT2G32290
gene id: 3702:AT2G32290
uniprot id: A0A7G2EAP9
uniprot id: Q8L762
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 14 family.
messages: Cytoplasm

3702:AT2G19040
gene id: 3702:AT2G19040
uniprot id: A0A5S9WZB1
uniprot id: F4ISE1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT5G04970
gene id: 3702:AT5G04970
uniprot id: Q9FF77
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT4G10895
gene id: 3702:AT4G10895
uniprot id: F4JN58
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G25820
gene id: 3702:AT2G25820
uniprot id: A0A654EW63
uniprot id: Q52QU1
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By drought.
messages: Expressed in roots, stems, seeds and stamen.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G23165
gene id: 3702:AT3G23165
uniprot id: P82757
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Could be the product of a pseudogene. Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G35100
gene id: 3702:AT5G35100
uniprot id: A0A384LLJ4
uniprot id: O65220
names: Caution
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Down-regulated by dark and high CO(2) treatment.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: S-nytrosylated during the hypersensitive disease resistance response.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous. Not detected in roots.
messages: chloroplast

3702:AT4G08869
gene id: 3702:AT4G08869
uniprot id: A0A178URS1
uniprot id: Q2V3K4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G34650
gene id: 3702:AT1G34650
uniprot id: Q9S9Z0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Expressed in exclusively in anthers with highest levels in the tapetum and pollen grains.
messages: Interacts with ANT, BBM and AIL1.
messages: Nucleus
messages: Probable transcription factor.

3702:AT1G47317
gene id: 3702:AT1G47317
uniprot id: Q2V4I2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Contains 6 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G10950
gene id: 3702:AT1G10950
uniprot id: A0A654E8M8
uniprot id: Q940G0
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: The C-terminal KXD/E motif functions as a Golgi retention signal, certainly through the binding to the COP1 coatomer.
messages: Ubiquitous.

3702:AT4G21280
gene id: 3702:AT4G21280
uniprot id: A0A178UY46
uniprot id: Q9XFT3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PsbQ family.
messages: By light.
messages: Expressed in green tissue, with high steady-state mRNA levels in leaves. Not expressed in roots.
messages: Required for photosystem II assembly/stability and photoautotrophic growth under low light conditions.
messages: chloroplast thylakoid membrane

3702:AT2G36050
gene id: 3702:AT2G36050
uniprot id: A0A178VSX7
uniprot id: Q9SJ45
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, cauline leaves, shoots, flower buds and siliques.
messages: Interacts with BLH1 and BLH3.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Plants over-expressing OFP15 show small rosette size, late flowering, reduced fertilization and blunt-end siliques.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT2G03260
gene id: 3702:AT2G03260
uniprot id: A0A1P8B091
uniprot id: Q6R8G8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SYG1 (TC 2.A.94) family.
messages: Cell membrane
messages: Expressed at low levels in roots and leaves.
messages: May transport inorganic phosphate (Pi).
messages: Membrane
messages: Not induced by Pi deficiency.

3702:AT1G11765
gene id: 3702:AT1G11765
uniprot id: A0A178WCG2
uniprot id: Q9SAA0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G05460
gene id: 3702:AT5G05460
uniprot id: A0A5S9Y3U6
uniprot id: F4JZC2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 85 family.
messages: Endoglycosidase that releases N-glycans from glycoproteins by cleaving the beta-1,4-glycosidic bond in the N,N'-diacetylchitobiose core. Involved in the production of high-mannose type N-glycans during plant development and fruit maturation.
messages: No visible phenotype under normal growth conditions, but the double mutants engase85A and engase85B accumulate very high level of free N-glycans carrying two GlcNAc at the reducing end, but their counterparts with a single GlcNAc are completely absent.
messages: cytosol

3702:AT2G17190
gene id: 3702:AT2G17190
uniprot id: Q9SII9
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP).
messages: Cytoplasm
messages: Interacts with 'Lys-48'-linked polyubiquitin chains via its UBA domain. Interacts with RPN10 and RPN13. Interacts with PEX2 and PEX12.
messages: Nucleus
messages: Ubiquitous with a strong expression level in inflorescence.

3702:AT1G13100
gene id: 3702:AT1G13100
uniprot id: A0A178W427
uniprot id: Q9SAE4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G13960
gene id: 3702:AT1G13960
uniprot id: A0A2H1ZEB2
uniprot id: Q9XI90
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence.
messages: In young, mature and senescent leaves.
messages: Increased sensitivity to the necrotrophic fungal pathogen Botrytis cinerea.
messages: Nucleus
messages: Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae).

3702:AT3G14205
gene id: 3702:AT3G14205
uniprot id: A0A178VL78
uniprot id: A0A178VLV7
uniprot id: A0A384K955
uniprot id: Q94A27
names: Caution
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).
messages: The phosphatase catalytic core motif (or RXNCXDCLDRTN motif) from the SAC domain is found in metal-independent protein phosphatases and inositol polyphosphate phosphatases.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous with a higher level of expression in young seedlings than in other tissues.
messages: Vacuole membrane

3702:AT4G32915
gene id: 3702:AT4G32915
uniprot id: A0A178V4Y9
uniprot id: F4JV80
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
messages: Belongs to the GatC family.
messages: Mitochondrion
messages: Subunit of the heterotrimeric GatCAB amidotransferase (AdT) complex, composed of A, B and C subunits.
messages: chloroplast

3702:AT1G63770
gene id: 3702:AT1G63770
uniprot id: B3H621
uniprot id: F4I3R0
uniprot id: F4I3R1
uniprot id: F4I3R4
uniprot id: Q8H0S9
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
messages: Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. Plays an essential role during prophase I of meiosis. Required for correct meiotic reconbination in both male and female gametophytes.
messages: Belongs to the peptidase M1 family.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in meiocytes during meiotic prophase I.
messages: Reduced fertility and shorter siliques bearing a lower number of seeds compared with wild-type plants. Cytogenetic characterization of meiosis in the mutant line reveals that both male and female meiosis are defective.
messages: Strongly inhibited by puromycin and DAMPAQ-22.

3702:AT5G05310
gene id: 3702:AT5G05310
uniprot id: A0A1P8BCM5
uniprot id: A0A1P8BCM7
uniprot id: A0A654FYL3
uniprot id: F4JZA0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ADP/ATP translocase tlc family.
messages: Membrane
messages: chloroplast membrane

3702:AT4G20910
gene id: 3702:AT4G20910
uniprot id: Q9C5Q8
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily. HEN1 family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds small RNA duplexes as monomer.
messages: Expressed in stems, leaves and inflorescences.
messages: Methyltransferase that adds a methyl group to the ribose of the last nucleotide of small RNAs (sRNAs). This protects the 3'-end of sRNAs from uridylation activity and subsequent degradation. Can methylate 3'-end of microRNAs (miRNAs), small interfering RNAs (siRNas) and trans-acting small interfering RNAs (ta-siRNAs). Involved in plant development through its role in small RNAs processing. Required for the specification of reproductive organ identities and the probable repression of A class genes. May control floral determinacy possibly by regulating the expression of the C class floral homeotic gene AGAMOUS (AG).
messages: Nucleus
messages: Reduced organ size, altered rosette leaf shape and increased number of coflorescences. Urydilation of miRNA 3'-ends.

3702:AT1G05340
gene id: 3702:AT1G05340
uniprot id: A0A178W1D8
uniprot id: O23035
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: Cell membrane
messages: Heterodimers (PubMed:29272523). Binds weakly to CYSTM7 and WIH1/CYSTM13 (PubMed:29272523).
messages: Induced by drought and oxidation stress.
messages: May be involved in aluminium (Al) tolerance (PubMed:12805622). Involved in resistance to abiotic stress (PubMed:29272523).
messages: Membrane
messages: Mostly expressed in roots, flowers and siliques and, to a lower extent, in stems and leaves.
messages: Nucleus

3702:AT3G20700
gene id: 3702:AT3G20700
uniprot id: A0A384KWY7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G32765
gene id: 3702:AT2G32765
uniprot id: A0A178VW71
uniprot id: Q8VZI7
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Cytoplasm
messages: Interacts with SAE2, SCE1, SIZ1 and MMS21 Covalently attached to a number of proteins.
messages: Nucleus
messages: Stress conditions rapidly and substantially elevates the amount of SUMO1 and SUMO2 conjugates with a concomitant reduction in the amount of free SUMO proteins. The SUMO conjugation system plays an important function in stress protection and/or repair.
messages: Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity).

3702:AT3G44290
gene id: 3702:AT3G44290
uniprot id: Q9LXL9
names: Domain
names: Function
names: Induction
names: Sequence Caution
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By glucose (PubMed:24625790). Induced by salt, drought stress and methyl methanesulfonate (MMS) treatment (PubMed:17158162).
messages: Expressed in roots, rosette leaves, cauline leaves, shoot apex, stems and flowers.
messages: Membrane
messages: Nucleus
messages: Sequencing errors.
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcription factor involved in modulation of abscisic acid (ABA) signaling. Attenuates ABA sensitivity and glucose-induced ABA accumulation. Reduces the expression of ABI4 gene.

3702:AT4G36210
gene id: 3702:AT4G36210
uniprot id: B3H797
uniprot id: F4JPN3
uniprot id: O65513
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMCO4 family.
messages: Membrane

3702:AT1G32780
gene id: 3702:AT1G32780
uniprot id: A0A178W8E9
uniprot id: A1L4Y2
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G27940
gene id: 3702:AT1G27940
uniprot id: A0A178W4F4
uniprot id: A0A1P8ATY7
uniprot id: Q9C7F8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT1G08260
gene id: 3702:AT1G08260
uniprot id: A0A178WI12
uniprot id: A0A384L5K4
uniprot id: A0A654E847
uniprot id: F4HW04
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DNA polymerase type-B family.
messages: Binds 1 [4Fe-4S] cluster.
messages: DNA polymerase II participates in chromosomal DNA replication.
messages: DNA polymerase II, which participates in chromosomal DNA replication. Required for the timing and determination of cell fate during plant embryogenesis and root pole development, by promoting cell cycle and cell type patterning. Necessary for proper shoot (SAM) and root apical meristem (RAM) functions. Involved in maintaining epigenetic states, controlling hypersensitive response (HR), and mediating abscisic acid (ABA) signaling. Required for flowering repression through a mechanism involving epigenetic gene silencing. May participate in processes involved in chromatin-mediated cellular memory.
messages: Follows a cell-cycle-dependent expression with a maximal induction in the S phase and another induction at the G2/M transition.
messages: Heterotetramer (By similarity). Subunit of the DNA polymerase II (PubMed:16212602, PubMed:19947980). Interacts (via C-terminus) with DPB2 (PubMed:16212602). Interacts with LHP1/TFL2 (PubMed:19947980).
messages: Lethal, with sporophytic embryo-defective with an arrest at the globular stage during embryo development. Abnormal cell division characterized by several rounds of mitosis with aberrant planes of division.
messages: Mostly expressed at low levels in inflorescence (floral meristem and flowers until anthesis), and, to a lower extent, in roots, seeds and leaves.
messages: Nucleus
messages: Present in actively dividing cells such as root and shoot meristematic regions, young leaves and stems, inflorescences and siliques.
messages: The CysA-type zinc finger is required for PCNA-binding.
messages: The CysB motif binds 1 4Fe-4S cluster and is required for the formation of polymerase complexes.
messages: The DNA polymerase activity domain resides in the N-terminal half of the protein, while the C-terminus is necessary for maintenance of the complex.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G12640
gene id: 3702:AT1G12640
uniprot id: F4IDU4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the membrane-bound acyltransferase family.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, rosette leaves, petals, stigma, chalazal endosperm of developing seeds and vascular bundles of siliques.
messages: Lysophospholipid acyltransferase with broad specificity (PubMed:18154737). Mediates the conversion of lysophosphatidylethanolamine (1-acyl-sn-glycero-3-phosphoethanolamine or LPE) into phosphatidylethanolamine (1,2-diacyl-sn-glycero-3-phosphoethanolamine or PE) (LPEAT activity) (PubMed:18154737). Catalyzes the acylation of lysophosphatidylserine (1-acyl-2-hydroxy-sn-glycero-3-phospho-L-serine or LPS) into phosphatidylserine (1,2-diacyl-sn-glycero-3-phospho-L-serine or PS) (LPSAT activity) (PubMed:18154737). Can convert lysophosphatidylcholine (1-acyl-sn-glycero-3-phosphocholine or LPC) into phosphatidylcholine (1,2-diacyl-sn-glycero-3-phosphocholine or PC) (LPCAT activity) (PubMed:18154737, PubMed:24189065, PubMed:25268378). Exhibits preference for C18-unsaturated acyl-CoA when transferring an acyl group to lysophosphatidylcholine (PubMed:24189065, PubMed:25268378). Can also utilize lysophosphatidylglycerol (LPG) as substrate in vitro (PubMed:18154737). Has neither activity towards lysophosphatidic acid (LPA) nor lysophosphatidylinositol (LPI) (PubMed:18154737). Lysophospholipid acyltransferases catalyze the reacylation step of the phospholipid remodeling pathway also known as the Lands cycle (Probable). The primary function of the Lands cycle is to provide a route for acyl remodeling to modify fatty acid (FA) composition of phospholipids derived from the Kennedy pathway (PubMed:23150634, PubMed:22932756). Is involved in PC acyl editing and phosphocholine headgroup exchange between PC and diacylglycerols. This processes control the majority of acyl fluxes through PC to provide polyunsaturated fatty acids for triacylglycerols synthesis in seeds (PubMed:22932756, PubMed:24189065). Involved with LPCAT2 in the direct incorporation of newly synthesized fatty acids exported form the chloroplast into PC through acyl editing (PubMed:31511316).
messages: No visible phenotype under normal growth conditions, but the double mutants lpcat1 and lpcat2-2 show increased contents of very-long-chain fatty acids and decreased polyunsaturated fatty acids in seed triacylglycerols.

3702:AT1G76280
gene id: 3702:AT1G76280
uniprot id: A0A384LI95
uniprot id: Q9SGQ6
names: Caution
names: Similarity
messages: Belongs to the PPR family. P subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G50590
gene id: 3702:AT1G50590
uniprot id: A0A1P8AVL1
uniprot id: Q9LPS9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pirin family.
messages: Nucleus

3702:AT2G24010
gene id: 3702:AT2G24010
uniprot id: A0A1P8B140
uniprot id: A0A1P8B146
uniprot id: A0A1P8B149
uniprot id: A0A5S9X0L7
uniprot id: O82229
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expression not detected.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT5G06050
gene id: 3702:AT5G06050
uniprot id: A0A178UGZ5
uniprot id: Q9FG39
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G20030
gene id: 3702:AT2G20030
uniprot id: Q9SL78
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G01720
gene id: 3702:AT4G01720
uniprot id: A0A5S9XPC5
uniprot id: Q0WNC3
uniprot id: Q9ZSI7
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT1G72030
gene id: 3702:AT1G72030
uniprot id: Q9C7G6
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autoacetylated.
messages: Belongs to the acetyltransferase family. GNAT subfamily.
messages: Expressed in green tissues.
messages: Oligomer.
messages: Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA), with a preference for leucine, methionine, serine, valine and to a lower extent threonine and alanine as substrates (can also use glycine), and epsilon-lysine acetylation (KA) of several plastid proteins.
messages: chloroplast

3702:AT2G01060
gene id: 3702:AT2G01060
uniprot id: A0A178VZU9
uniprot id: Q9SJW0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MYB-CC family.
messages: Nucleus

3702:AT1G14450
gene id: 3702:AT1G14450
uniprot id: A0A178W524
uniprot id: A0A1P8ATJ4
uniprot id: A0A654EAJ7
uniprot id: Q9M9R9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFB3 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G22235
gene id: 3702:AT4G22235
uniprot id: Q6NMS3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G10270
gene id: 3702:AT1G10270
uniprot id: A0A178W2P4
uniprot id: Q9SY69
names: Caution
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PPR family. P subfamily.
messages: Expressed in developing embryos up to the heart stage.
messages: Interacts with RPB36B through its WQQ domain.
messages: May function as a transcriptional regulator essential for early embryogenesis.
messages: Nucleus
messages: The WQQ domain consists of a repetition of W-x(2)-Q-x(4)-Q-x(2) motifs.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous but preferentially expressed in gametophytes and young embryos.

3702:AT4G24290
gene id: 3702:AT4G24290
uniprot id: Q9STW5
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
messages: Belongs to the complement C6/C7/C8/C9 (TC 1.C.39) family.
messages: May be due to an intron retention.
messages: Negatively controls the salicylic acid (SA)-mediated pathway of programmed cell death in plant immunity.
messages: Sequencing errors.

3702:AT2G24200
gene id: 3702:AT2G24200
uniprot id: A0A178VYU7
uniprot id: F4INR3
uniprot id: P30184
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M17 family.
messages: Binds 2 Mn(2+) ions per subunit.
messages: Cytoplasm
messages: Functions as molecular chaperone to protect proteins from heat-induced damage.
messages: Homohexamer (dimer of homotrimers).
messages: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (Probable). Possesses leucine aminopeptidase activity against the model substrate leucine-amido methyl coumarin (PubMed:22493451). Possesses Cys-Gly dipeptidase activity. In addition, can cleave Cys-Leu and Leu-Cys dipeptides (PubMed:25716890).

3702:AT2G38700
gene id: 3702:AT2G38700
uniprot id: A0A178VRG6
uniprot id: O23722
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the diphosphomevalonate decarboxylase family.
messages: Decreased contents of campesterol and sitosterol (by 50% and 30%, respectively, compared with wild type). Decreased emissions of beta-caryophyllene (by 35% compared with wild-type).
messages: Homodimer.
messages: Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids (PubMed:10344201, PubMed:26216978). Is specific for (R)-5-diphosphomevalonate (MVAPP). The catalytic efficiency with (R)-5-phosphomevalonate (MVAP) as substrate is 10000-fold lower than for MVAPP (PubMed:26216978). Can complement a yeast mutant defective in MVD activity (PubMed:10344201).
messages: Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids.
messages: Peroxisome

3702:AT4G00620
gene id: 3702:AT4G00620
uniprot id: O65271
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
messages: Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
messages: Homodimer.
messages: chloroplast

3702:AT5G25420
gene id: 3702:AT5G25420
uniprot id: Q3E956
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Membrane

3702:AT5G55340
gene id: 3702:AT5G55340
uniprot id: A0A178ULP6
uniprot id: Q9FJ76
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the wax synthase family.
messages: Catalyzes the final step in the synthesis of long-chain linear esters (waxes).
messages: Membrane

3702:AT1G48540
gene id: 3702:AT1G48540
uniprot id: A0A178W5F2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G65480
gene id: 3702:AT1G65480
uniprot id: A0A178WM09
uniprot id: A0A1P8AMK0
uniprot id: Q9SXZ2
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: An article reported that transcripts can move in the phloem from leaves to shoot apex to induce flowering; however, this paper was later retracted.
messages: Belongs to the phosphatidylethanolamine-binding protein family.
messages: Component of the mobile flower-promoting signal (floral stimulus or florigen). Promotes the transition from vegetative growth to flowering. Required for 'SEPALLATA3' (SEP3) and 'FRUITFULL' (FUL) accumulation in mature rosette leaves. Seems to acts in parallel with 'LEAFY' to induce flowering by regulating 'APETALA1'. Translated in leaves and then transported to the shoot apical meristem where it activates the transcription of several floral meristem identity genes. May play a role in both the autonomous and the long-day flowering pathways.
messages: Cytoplasm
messages: Endoplasmic reticulum
messages: Expression gradually increases with time under both long-day (LD) and short-day (SD) photoperiods. Under LD conditions, expression is first detected on day 4 and plateaued around day 6, preceeding floral commitment around days 9 and 10.
messages: Interacts with FD/BZIP14 and FDP/BZIP27 (PubMed:16099979, PubMed:16099980). Interacts with FTIP1/MCTP1 in phloem companion cells (PubMed:22529749, PubMed:29259105). Interacts with NAKR1 (PubMed:27255839).
messages: Levels follow a circadian cycle with a progressive accumulation during the day time (PubMed:25343985). By light. Expression is delayed and reduced under SD conditions. Repressed by FLC. Up-Regulated by VOZ1 and/or VOZ2 (PubMed:22904146). Up-regulated by APL/FE (PubMed:26239308). Down-regulated by the H3K36me2 modification at the FT locus produced by the interaction between EFM and JMJ30 (PubMed:25132385). Repressed by MYB56 (PubMed:25343985).
messages: Mostly localized in leaves vasculature.
messages: Mutagenesis of Tyr-85 to His converts the activator of flowering 'FLOWERING LOCUS T' into a 'TERMINAL FLOWER 1'-like repressor of flowering.
messages: Nucleus

3702:AT4G32350
gene id: 3702:AT4G32350
uniprot id: A0A1P8B4K6
uniprot id: A0A654FUT9
uniprot id: Q8RXT2
names: Similarity
messages: Belongs to the IST1 family.

3702:AT5G07370
gene id: 3702:AT5G07370
uniprot id: A0A384LG67
uniprot id: B9DGE0
uniprot id: Q9LY23
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the inositol phosphokinase (IPK) family.
messages: Cell membrane
messages: Detected in leaves, stems, roots, siliques and flowers. Highly expressed in root tissues, anthers, the stigma, pollen grains and growing pollen tubes.
messages: Does not bind calmodulin.
messages: Expression persisted in the stigmatic tissue after fertilization and in siliques during seed maturation.
messages: Inositol phosphate kinase with a broad substrate specificity.
messages: Inositol phosphate kinase with a broad substrate specificity. Phosphorylates inositol 1,4,5-trisphosphate (Ins(1,4,5)P3), inositol 1,4,5,6-tetrakisphosphate (Ins(1,4,5,6)P4), inositol 1,3,4,5-tetrakisphosphate (Ins(1,3,4,5)P4), inositol 1,3,4,6-tetrakisphosphate (Ins(1,3,4,6)P4) and inositol 1,2,3,4,6-pentakisphosphate (Ins(1,2,3,4,6)P5) but not inositol 1,4-bisphosphate (Ins(1,4)P2), inositol 1,3,4-trisphosphate (Ins(1,3,4)P3), inositol 1,2,6-trisphosphate (Ins(1,2,6)P3), inositol 3,4,5,6-tetrakisphosphate (Ins(3,4,5,6)P4), inositol 1,3,4,5,6-pentakisphosphate (Ins(1,3,4,5,6)P5), inositol 1,2,4,5,6-pentakisphosphate (Ins(1,2,4,5,6)P5) or inositol hexakisphosphate (InsP6). Regulates pollen and root development probably through the regulation of InsP3-mediated calcium accumulation.
messages: Not induced by auxin.
messages: Nucleus
messages: Phosphorylated.

3702:AT2G03390
gene id: 3702:AT2G03390
uniprot id: Q67Y99
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds to CLPC1 and CLPC2. Interacts with ClpS1; this interaction stimulates their association with ClpC. Associates with the Clp substrate HEMA1 (GluTR).
messages: Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC).
messages: Expressed constitutively in photosynthetic tissues such as leaves, stems and flowers, and, at low levels, in siliques.
messages: Reduction by 10 precent of total chlorophyll, with slight increase of chlorophyll a/b ratio and slight decrease of chlorophyll-to-carotenoid ratios. Overaccumulation of ClpS1 protein.
messages: Slight reduction during senescence.
messages: chloroplast

3702:AT2G31780
gene id: 3702:AT2G31780
uniprot id: Q9SKC2
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: May be due to a competing acceptor splice site.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT2G05720
gene id: 3702:AT2G05720
uniprot id: A0A178VZ33
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G24150
gene id: 3702:AT4G24150
uniprot id: A0A1P8B7V6
uniprot id: A0A1P8B7W1
uniprot id: Q9SU44
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRF family.
messages: Nucleus
messages: Predominantly expressed in shoot tips and flowers.
messages: The QLQ domain and WRC domain may be involved in protein-protein interaction and DNA-binding, respectively.
messages: Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation.
messages: Transcription activator.
messages: microRNA 396 (miR396a or miR396b) negatively regulates growth-regulating factors (GRF1-4 and GRF7-9).

3702:AT5G51290
gene id: 3702:AT5G51290
uniprot id: Q6USK2
names: Disruption Phenotype
names: Function
names: Induction
messages: By infection with bacterial pathogen P.syringae.
messages: Catalyzes specifically the phosphorylation of ceramide to form ceramide 1-phosphate. Possesses high activity on ceramide analogs (C6, C8 synthetic ceramides) and lower activity on C6 and C8 dihydroceramides. Has weak activity on natural ceramides (a mixture of ceramides from bovine brain) and the synthetic substrate C2 ceramide. Has very poor activity on diacylglycerol and sphingosine. Ceramide is a critical sphingolipid metabolite that induces programmed cell death (PCD) in plants and ceramide-1-phosphate has a PCD suppressive effect. Thus, ceramide phosphorylation plays a role in the modulation of PCD and CERK activity is crucial for the maintenance of cell viability.
messages: Enhanced apoptotic-like cell death late in development.

3702:AT5G67580
gene id: 3702:AT5G67580
uniprot id: Q9FJW5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H1/H5 family. SMH subfamily.
messages: Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.
messages: Chromosome
messages: Forms a homodimer and heterodimers with TRB1 or TRB3. Interacts with TRB1 and TRB3.
messages: HTH myb-type domain confers double-stranded telomeric DNA-binding while the H15 domain is involved in non-specific DNA-protein interaction and multimerization.
messages: Nucleus
messages: Ubiquitous.
messages: nucleolus

3702:AT3G04270
gene id: 3702:AT3G04270
uniprot id: A0A654FEI2
uniprot id: F4J3M3
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT5G18690
gene id: 3702:AT5G18690
uniprot id: Q6NN00
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: O-glycosylated on the hydroxyproline residues.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT1G51360
gene id: 3702:AT1G51360
uniprot id: Q9SYD8
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Induced by salicylic acid (SA), jasmonic acid (JA) and infection with the fungal pathogen F.oxysporum.
messages: Involved in defense against fungal pathogens. Possesses antifungal activity against diverse pathogenic fungi.
messages: cytosol

3702:AT5G40850
gene id: 3702:AT5G40850
uniprot id: A0A1P8BE13
uniprot id: F4KIS7
uniprot id: Q42606
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the precorrin methyltransferase family.
messages: By light (PubMed:15326282, PubMed:27729721). Accumulates within two hours in etiolated seedlings exposed to light (PubMed:27729721).
messages: Embryo lethal.
messages: Essential protein required for siroheme biosynthesis (PubMed:20592802). Catalyzes the two successive C-2 and C-7 methylation reactions involved in the conversion of uroporphyrinogen III to precorrin-2 via the intermediate formation of precorrin-1 (PubMed:9006913). It is a step in the biosynthesis of siroheme (PubMed:9006913). Promotes nitrogen and sulfur assimilation as well as photosynthesis efficiency by triggering chlorophyll, nitrite reductase (NiR) and sulfite reductase (SiR) biosynthesis (PubMed:29472934).
messages: Mostly expressed in leaves, and, to a lower extent, in stems, flowers and siliques.
messages: chloroplast

3702:AT1G78300
gene id: 3702:AT1G78300
uniprot id: A0A654ERJ3
uniprot id: Q01525
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: Cytoplasm
messages: Interacts with CINV1.
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
messages: Nucleus

3702:AT1G71410
gene id: 3702:AT1G71410
uniprot id: Q9C9H8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abnormal root hair development (e.g. shorter with abnormal shapes) (PubMed:28751315). The double mutant scyl2a scyl2b has short root hairs and small shoots (PubMed:28751315).
messages: Although it belongs to the kinase superfamily, lacks the residues involved in ATP binding, suggesting that it has no protein kinase activity.
messages: Belongs to the protein kinase superfamily.
messages: Expressed in roots, seedlings, leaves, stems, flowers, and, at low levels, in siliques.
messages: Expressed in shoot and root vascular tissues (PubMed:28751315). In root cap regions, accumulates in columella cells and lateral root caps (PubMed:28751315). Also observed specialized cell types such as trichomes, guard cells and root hairs (PubMed:28751315).
messages: Golgi apparatus membrane
messages: Interacts with VTI11, VTI12 and CHC1.
messages: Prevacuolar compartment membrane
messages: Probably inactive kinase (PubMed:28751315). Component of the AP2-containing clathrin coat that regulates clathrin-dependent trafficking at plasma membrane, TGN and endosomal system (PubMed:28751315). Together with SCYL2B, required for cell growth, plant growth and development (PubMed:28751315). Essential for polarized root hair development probably by mediating the root hair tip localization of cellulose synthase-like D3 (CSLD3) (PubMed:28751315).
messages: The protein kinase domain is predicted to be catalytically inactive.
messages: trans-Golgi network membrane

3702:AT1G26900
gene id: 3702:AT1G26900
uniprot id: Q9ZVG8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT1G56280
gene id: 3702:AT1G56280
uniprot id: F4I522
uniprot id: Q39083
names: Domain
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Di19 family.
messages: By drought stress, but not by abscisic acid.
messages: Expressed in seedlings, roots, leaves, stems, flowers and siliques.
messages: Interacts with ADO2/LKP2, CPK11 and CPK4. Weak interaction with CPK12 and no interactions with CPK1, CPK5 or CPK26.
messages: Nucleus
messages: Phosphorylated within the NLS/NES region.
messages: The NLS/NES region (98-121) is necessary and sufficient for interaction with CPK11.

3702:AT1G58390
gene id: 3702:AT1G58390
uniprot id: Q8W474
names: Domain
names: Function
names: Sequence Caution
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Cloning artifact.
messages: Possible disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT1G58380
gene id: 3702:AT1G58380
uniprot id: G1JSI6
uniprot id: Q8L8Y0
names: Similarity
messages: Belongs to the universal ribosomal protein uS5 family.

3702:AT1G59580
gene id: 3702:AT1G59580
uniprot id: A0A178WBY0
uniprot id: Q39022
names: Activity Regulation
names: Domain
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-191 and Tyr-193, which activates the enzyme (By similarity). Phosphorylated on Ser residue.
messages: Highest levels in the stem. Present in the leaf, root and flower, but not in seeds.
messages: Interacts with MKK3.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT3G63520
gene id: 3702:AT3G63520
uniprot id: O65572
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the carotenoid oxygenase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By drought stress.
messages: Cleaves a variety of carotenoids symmetrically at both the 9-10 and 9'-10' double bonds. Active on beta,beta-carotene, lutein, zeaxanthin, all-trans-violaxanthin, 9-cis-violaxanthin and 9'-cis-neoxanthin. With most substrates, the carotenoid is symmetrically cleaved. Probably not involved in abscisic acid biosynthesis.
messages: Cytoplasm
messages: High expression in flowers and siliques. Also detected in stems, leaves and roots.
messages: Homodimer.
messages: Plants do not show any phenotype alteration, but leads to higher seed carotenoid content.

3702:AT1G72990
gene id: 3702:AT1G72990
uniprot id: A0A1P8AQM6
uniprot id: Q93Z24
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Ubiquitous, with higher expression levels in roots and siliques.
messages: apoplast

3702:AT4G14550
gene id: 3702:AT4G14550
uniprot id: A0A1P8B7U4
uniprot id: A0A1P8B7U9
uniprot id: A0A384LC96
uniprot id: C0Z2L3
uniprot id: Q0WRB1
uniprot id: Q38832
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers (By similarity). Interacts with TPL.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: Preferentially expressed in roots and flowers.
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT1G65970
gene id: 3702:AT1G65970
uniprot id: A0A178WKG0
uniprot id: Q9SRZ4
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxiredoxin family. Prx5 subfamily.
messages: Cytoplasm
messages: Highly expressed in buds and flowers. Slightly expressed in green tissues. Also detected in pollen.
messages: Highly induced by salt or oxidative stresses.
messages: Monomer.
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this 1-Cys peroxiredoxin, no C(R) is present and C(P) instead forms a disulfide with a cysteine from another protein or with a small thiol molecule.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

3702:AT5G56550
gene id: 3702:AT5G56550
uniprot id: Q9LVB9
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abolished ability to confer tolerance to stress (e.g. metals and oxidizing chemicals such as Cd, As, Cu, diamide or tert-butyl hydroperoxide (t-BOOH)) (PubMed:18980652). Early flowering under mild drought stress treatment (PubMed:31540691).
messages: Interacts with SOC1 in the nucleus.
messages: Lower levels in the dark than in white, red and far-red light (PubMed:18980652). Induced by wounding in an ATAF2-dependent manner (PubMed:22937923).
messages: Mostly expressed in stems, shoots and leaves, and, to a lower extent, in siliques and seedlings (PubMed:18980652). Barely detectable in roots (PubMed:18980652).
messages: Nucleus
messages: Nucleus speckle
messages: Promotes the tolerance to a range of metals, including cadmium (Cd), arsenic (As) and copper (Cu) and to oxidizing chemicals (e.g. diamide and tert-butyl hydroperoxide (t-BOOH)) (PubMed:18980652). May act as a chromatin remodeling factor for stress responses (PubMed:18980652). Negative regulator of flowering, especially during drought stress, probably to prevent precocious flower development and subsequent low seed set (PubMed:31540691). Repress the AP1 promoter in a SOC1-dependent manner (PubMed:31540691).

3702:AT3G06560
gene id: 3702:AT3G06560
uniprot id: Q56XM9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the poly(A) polymerase family.
messages: Binds 2 magnesium ions. Also active with manganese.
messages: Essential protein (PubMed:19956626). Polymerase that creates the 3'-poly(A) tail of mRNA's (PubMed:15297145). Also required for the endoribonucleolytic cleavage reaction at some polyadenylation sites. May acquire specificity through interaction with a cleavage and polyadenylation specificity factor (CPSF) at its C-terminus (By similarity).
messages: Expressed in leaves (mostly in petioles and tips), cotyledon, roots (tips, vascular tissue of the radicle, and throughout the root tissue excluding the elongation zone), stems, and flowers (restricted to the stigma and the pollen in mature anthers) (PubMed:15297145, PubMed:19956626). Active in the primary and secondary root systems (PubMed:19956626).
messages: Lethal.
messages: Monomer (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits FIPS5 and CPSF30 (PubMed:18479511).
messages: Nucleus

3702:AT5G39850
gene id: 3702:AT5G39850
uniprot id: A0A178US64
uniprot id: Q9FLF0
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: Binds to the translation initiation factors TIF3E1.

3702:AT1G67300
gene id: 3702:AT1G67300
uniprot id: A0A178WLA9
uniprot id: A0A1P8ANT5
uniprot id: A0A1P8ANU5
uniprot id: F4HRU5
uniprot id: Q9FYG3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: May be involved in the efflux of glucose towards the cytosol.
messages: Membrane
messages: chloroplast membrane

3702:AT2G38760
gene id: 3702:AT2G38760
uniprot id: A0A178W040
uniprot id: Q9SE45
names: Domain
names: Induction
names: Similarity
names: Tissue Specificity
messages: A pair of annexin repeats may form one binding site for calcium and phospholipid.
messages: Belongs to the annexin (TC 1.A.31.1) family.
messages: Belongs to the annexin family.
messages: Expressed mainly in roots and flowers. Lower in stems and leaves.
messages: Up-regulated by cold and dehydration stresses. Down-regulated by heat shock stress.

3702:AT4G01770
gene id: 3702:AT4G01770
uniprot id: A0A1P8B3C7
uniprot id: A0A384K824
uniprot id: Q9ZSJ2
uniprot id: W8PV76
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 77 family.
messages: Catalyzes the transfer of D-xylose from UDP-alpha-D-xylose onto L-fucose. Probably involved in the biosynthesis of rhamnogalacturonan II (RG-II) through xylosylation of the internal fucose moiety of the A-chain of RG-II, a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues such as roots and pollen tube growth and elongation.
messages: Expressed in roots, rosette leaves, cauline leaves and stems.
messages: Glycosylated.
messages: Golgi apparatus membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: No visible phenotype under normal growth conditions.
messages: The conserved DXD motif is involved in enzyme activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G34370
gene id: 3702:AT4G34370
uniprot id: A0A178V3V2
uniprot id: Q949V6
names: Caution
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: Lacks the His residue in the RING-type domain 2 that is one of the conserved features of the family.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT5G66980
gene id: 3702:AT5G66980
uniprot id: Q9FGD2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G28853
gene id: 3702:AT3G28853
uniprot id: Q9LH88
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G14210
gene id: 3702:AT2G14210
uniprot id: A0A1P8AYX0
uniprot id: Q9SI38
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Impaired lateral root proliferation in nitrate rich root zones.
messages: Induced by nitrate in root cell culture, (PubMed:9430595, PubMed:17148611). In roots, seems induced by nitrogen (N) deprivation (e.g. nitrate free medium) but rapidly repressed by N re-supply (e.g. nitrate, glutamine and ammonium) (PubMed:16021502). Slight repression in shoots during nitrogen (N) deprivation.
messages: Interacts with AGL16, AGL21 and SOC1.
messages: Nucleus
messages: Probable transcription factor. Required for root plasticity in response to nitrate, NO(3)(-). Promotes lateral root growth in a NRT1.1-dependent manner.
messages: Specifically expressed in roots, mostly in lateral roots (LR) primordia, young emerging LRs, apex and base of LRs, apex of the primary root, and in the stele. Barely detectable in shoots.

3702:AT5G21105
gene id: 3702:AT5G21105
uniprot id: F4K6Z4
uniprot id: F4K6Z5
uniprot id: F4K6Z6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the multicopper oxidase family.
messages: Dimer.
messages: Secreted

3702:AT1G02930
gene id: 3702:AT1G02930
uniprot id: A0A178WN35
uniprot id: P42760
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: By dehydration stress, salicylic acid, ethylene, methyl jasmonate, auxin, H(2)O(2), copper, metolachlor, and the pathogens P.syringae and Hyaloperonospora parasitica. Induced by cadmium (PubMed:16502469).
messages: Involved in camalexin biosynthesis by probably catalyzing the conjugation of GSH with indole-3-acetonitrile (IAN). May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: No visible phenotype under normal growth conditions, but reduced levels of camalexin production during infection by B.cinerea.
messages: cytosol

3702:AT2G32860
gene id: 3702:AT2G32860
uniprot id: O48779
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT5G13350
gene id: 3702:AT5G13350
uniprot id: A0A384L4B7
uniprot id: Q9LYU1
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.

3702:AT5G02620
gene id: 3702:AT5G02620
uniprot id: A0A1P8BFK5
uniprot id: Q6AWW5
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G14690
gene id: 3702:AT4G14690
uniprot id: Q94K66
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Appears transiently during greening of etiolated seedlings and disappears before chloroplast development is completed.
messages: Belongs to the ELIP/psbS family.
messages: By high-intensity light, mostly at cold temperature (e.g. 4 degrees Celsius) (at protein level). This high-light-mediated accumulation is inhibited by okadaic acid. A stepwise accumulation is induced when 40 percents of PSII reaction centers become photodamaged. Induced by UV-A, red, far-red and blue lights illumination in a phytochrome A and phytochrome B-dependent manner. The COP9 signalosome is involved in dark-mediated repression. Accumulates upon heat shock but repressed at continuous high temperatures. Transcript levels follow a circadian cycle, with highest levels 2 hours after light, without protein accumulation. In light stress-preadapted or senescent leaves exposed to light stress there is a lack of correlation between transcript and protein accumulation; transcripts accumulate in yellow leaves exposed to high light, but not proteins. Transiently up-regulated during deetiolation (PubMed:31604812).
messages: Probably involved in the integration of pigments into the mature light-harvesting pigment-protein complexes. Light-harvesting chlorophyll (LHC) a/b-binding protein required to ensure a high rate of chlorophyll accumulation during deetiolation in continuous high light. Involved in seed germination. May fulfill a photoprotective functions. Prevents excess accumulation of free chlorophyll by inhibiting the entire chlorophyll biosynthesis pathway (e.g. 5-aminolevulinate synthesis and Mg-protoporphyrin IX chelatase activity), and hence prevent photooxidative stress.
messages: Reduced greening during deetiolation in continuous high light, with a reduced ratio between chlorophylls a and especially at the highest irradiances. Slight reduction in the rate of chlorophyll accumulation during greening at moderate light intensities, and lower zeaxanthin accumulation in high light conditions. Normal sensitivity to photoinhibition and photooxidation. Impaired seed germination, especially at hot temperatures (30 degrees Celsius).
messages: chloroplast thylakoid membrane

3702:AT1G77890
gene id: 3702:AT1G77890
uniprot id: A0A384L4R7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G42870
gene id: 3702:AT2G42870
uniprot id: Q9SJH0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Atypical bHLH transcription factor that acts as negative regulator of a variety of shade avoidance syndrome (SAS) responses, including seedling elongation and photosynthetic pigment accumulation. Acts as direct transcriptional repressor of two auxin-responsive genes, SAUR15 and SAUR68. May function in integrating shade and hormone transcriptional networks in response to light and auxin changes.
messages: Belongs to the bHLH protein family.
messages: Homodimer.
messages: Nucleus
messages: Plants overexpressing PAR1 are dwarf with compact rosettes and inflorescences, epinastic leaves, shorter flowering stems and siliques and a general dark-green phenotype. Plants silencing PAR1 exhibit a slight increase in the length of hypocotyls, cotyledons and primary leaves (PubMed:17948056).

3702:AT3G10010
gene id: 3702:AT3G10010
uniprot id: Q9SR66
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Although strongly related to DNA glycosylase proteins, it differs from these proteins because of its large size and its unique N-terminal basic domain. The DNA repair function has not been proved and may not exist.
messages: Belongs to the DNA glycosylase family. DEMETER subfamily.
messages: Binds 1 [4Fe-4S] cluster. The cluster does not appear to play a role in catalysis, but is probably involved in the proper positioning of the enzyme along the DNA strand.
messages: Nucleus
messages: Potential transcriptional activator that may act by nicking the target promoter. Catalyzes the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism (By similarity).
messages: The DEMETER domain, which is present in proteins of the subfamily, is related to the J-domain, but lacks some important conserved residues.

3702:AT1G33800
gene id: 3702:AT1G33800
uniprot id: A0A178W7W0
uniprot id: Q9LQ32
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily.
messages: Expressed in hypocotyls, roots, rosette leaves, stems and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Methyltransferase catalyzing 4-O-methylation of glucuronic acid side chains on xylan.
messages: No visible phenotype; due to the redundancy with GXM1 and GXM2. Reduced levels of methylated glucuronic acids. Gxm2 and gxm3 double mutants show reduced stem mechanical strength.
messages: Up-regulated during secondary cell wall deposition.

3702:AT2G28190
gene id: 3702:AT2G28190
uniprot id: A0A178VRV1
uniprot id: O78310
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Cu-Zn superoxide dismutase family.
messages: Binds 1 copper ion per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Mediates tolerance to stress, including photo-oxidative stress.
messages: Expressed in leaves (at protein level). The spatial localization is regulated by miR398-mediated silencing. Mostly present in flowers, old rosette leaves and inflorescence, and, to a lower extent, in cauline leaves, stems and roots.
messages: Growth retardation (e.g. delayed flowering) and abnormal chloroplasts (e.g. less organized with fewer stacks). This phenotype is reversed under very low light conditions. Enhanced tolerance to oxidative stress.
messages: Homotetramer.
messages: Upon photosynthetically active radiation (PAR) (e.g. light fluence) increase and UV-B treatment. Accumulates in response to ozone fumigation, during recovery. Induced in response to oxidative stress, via a reduction of miR398-mediated silencing. Repressed by sucrose in a miR398-mediated silencing-dependent manner. Repressed by salt stress. Down-regulated by aconitase.
messages: chloroplast

3702:AT3G09040
gene id: 3702:AT3G09040
uniprot id: A0A178V8N2
uniprot id: Q9SS83
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G28150
gene id: 3702:AT3G28150
uniprot id: Q9LRS2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Membrane
messages: No visible phenotype. Loss of O-acetylated xyloglucan oligosaccharides in seeds, but no effect on xyloglucan O-acetylation in roots and rosette leaves.
messages: Xyloglucan acetyltransferase that catalyzes the acetylation of fucosylated Gal residues on xyloglucan side chains (PubMed:30083810). Predominantly catalyze 6-O-monoacetylation of Gal residues in the Fuc-Gal-Xyl trisaccharide side chains of xyloglucan oligomers (PubMed:30083810). Involved in xyloglucan specific O-acetylation in seeds (PubMed:22086088).

3702:AT5G65940
gene id: 3702:AT5G65940
uniprot id: A0A178UQY3
uniprot id: A0A5S9YI55
uniprot id: Q9LKJ1
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Down-regulated by sugar.
messages: Expressed in roots, leaves, flowers and siliques.
messages: Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism.
messages: Induced during post-germinative growth. Detected in imbibed seeds.
messages: Inhibited by copper.
messages: Involved in valine catabolism. May be indirectly involved in benzoic acid biosynthesis and in cold signaling and cold tolerance.
messages: Loss of function mutants are defective in beta-oxidization of fatty acids and in the conversion of indole-3-butyric acid (IBA) to indole-3-acetic acid (IAA). These inhibitions may be due to the accumulation of a toxic intermediate. The mutants are also less tolerant to freezing stress after cold acclimation.
messages: Peroxisome
messages: Resistant to inhibition of root elongation and promotion of lateral root formation by the auxin precursor indole-3-butyric acid (IBA). Deficiency of benzoic acid-containing glucosinolates in the seeds. Resistance to the pro-herbicide 2,4-dichlorophenoxybutyric acid (2,4-DB).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G20680
gene id: 3702:AT2G20680
uniprot id: Q7Y223
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 5 (cellulase A) family.
messages: Expressed in roots, stems, leaves and seeds.
messages: Secreted

3702:AT4G27360
gene id: 3702:AT4G27360
uniprot id: Q8VZW5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dynein light chain family.
messages: cytoskeleton

3702:AT5G02850
gene id: 3702:AT5G02850
uniprot id: A0A178UPY5
uniprot id: Q9LZ00
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 4 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).
messages: Component of the Mediator complex.
messages: Nucleus

3702:AT5G45980
gene id: 3702:AT5G45980
uniprot id: Q6X7J5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the WUS homeobox family.
messages: Detected in the egg cell and the central cell of the embryo sac (PubMed:14711878). After fertilization, it is expressed in the zygote (PubMed:14711878). After the first division of the zygote, it is detected exclusively in the basal daughter cell, while WOX2 is expressed in the apical daughter cell (PubMed:14711878). Through the 16-cell stage, it is expressed in all descendants of the basal daughter, the developing suspensor and the hypophyseal cell (PubMed:14711878). After the hypophysis had divided, expression stops in descendants, but remains present in the extra embryonic suspensor (PubMed:14711878). Moreover it is found in the cellularized endosperm of the micropylar region during the globular and heart stages of embryogenesis (PubMed:14711878). Not expressed later in embryogenesis or in postembryonic stages (PubMed:14711878). Activated in the zygote after fertilization (PubMed:21316593).
messages: Expressed only in the egg cell (PubMed:21316593). Not detected in the pollen tube (PubMed:21316593). Expressed in the zygote, the basal cell, and later the suspensor (PubMed:21802295). Expressed in all suspensor cells, except the hypophysis, and in the embryo surrounding region (ESR) endosperm cells (PubMed:22427333). Strongly expressed in the suspensor cells, with a weak expression also detected throughout the developing embryo (PubMed:22827849).
messages: No visible phenotype, due to the redundancy with WOX9 (PubMed:17706632). Wox8 and wox9 double mutants are embryo lethal, with embryos disrupted as early as the first cell division in the embryo proper (PubMed:17706632).
messages: Nucleus
messages: Probable transcription factor, which may be involved in embryonic patterning (PubMed:14711878). May be required for basal embryo development after fertilization (PubMed:14711878). Acts partially redundantly with STIP in promoting embryonic cell division and proliferation (PubMed:17706632). Promotes cotyledon boundary formation by maintaining the symmetry in CUC genes expression domains (PubMed:22827849).
messages: Up-regulated in the zygote after fertilization by the transcription factor WRKY2 (PubMed:21316593). Up-regulated by CLE8 (PubMed:22427333).

3702:AT1G18310
gene id: 3702:AT1G18310
uniprot id: F4IAQ0
names: Similarity
messages: Belongs to the glycosyl hydrolase 81 family.

3702:AT3G58030
gene id: 3702:AT3G58030
uniprot id: A0A384L3Q5
uniprot id: Q8RXF2
names: Domain
names: Function
names: Subcellular Location Annotation
messages: E3 ubiquitin-protein ligase.
messages: Endoplasmic reticulum membrane
messages: The RING-type zinc finger domain is responsible for E3 ligase activity.

3702:AT3G06300
gene id: 3702:AT3G06300
uniprot id: A0A178VGJ1
uniprot id: F4JAU3
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the P4HA family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Possesses high affinity for leucine-rich repeat and proline-rich extensins of root cell walls that are essential for root hair development. Hydroxyprolines define the subsequent O-glycosylation sites by arabinosyltransferases which elongate the O-arabinosides on extensins. Has low affinity for the substrates tested in vitro.
messages: Endoplasmic reticulum membrane
messages: Expressed in epidermal root hair cells (trichoblasts).
messages: Golgi apparatus membrane
messages: Membrane
messages: Reduced root hair length and content of hydroxyproline in root cell walls.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G45277
gene id: 3702:AT5G45277
uniprot id: A0A1P8BEG4
names: Similarity
messages: Belongs to the protease inhibitor I13 (potato type I serine protease inhibitor) family.

3702:AT4G34710
gene id: 3702:AT4G34710
uniprot id: A0A654FVJ1
uniprot id: O23141
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
messages: Homodimer and heterodimer with ADC1.
messages: Increased levels of lateral root branching.
messages: Induced by wounding, methyl jasmonate and abscisic acid (ABA) (PubMed:12428010). Induced by salt stress (PubMed:14684170). Induced by osmotic stress (PubMed:10481069). Induced by freezing (PubMed:18701673). Induced by the bacterial pathogen Pseudomonas viridiflava (PubMed:25409942).
messages: Plants over-expressing ADC2 accumulate very high levels of putrescine and exhibit dwarfism and late-flowering phenotypes.
messages: Required for the biosynthesis of putrescine. Catalyzes the first step of polyamine (PA) biosynthesis to produce putrescine from arginine (PubMed:14684170, PubMed:15733873, PubMed:16045477, PubMed:25409942). Is a major contributor to basal arginine decarboxylase (ADC) activity and putrescine biosynthesis (PubMed:25409942). Accumulation of putrescine plays a positive role in salt stress tolerance (PubMed:14684170). Accumulation of putrescine plays a positive role in freezing tolerance (PubMed:18701673). Production of PA is essential for normal seed development (PubMed:15733873). Controls PA homeostasis which is crucial for normal plant growth and development (PubMed:27014322).
messages: chloroplast
messages: cytosol

3702:AT2G20800
gene id: 3702:AT2G20800
uniprot id: Q9SKT7
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Alternative NADH-ubiquinone oxidoreductase which catalyzes the oxidation of mitochondrial NADH does not translocate protons across the inner mitochondrial membrane (By similarity). NAD(P)H dehydrogenase; more efficient on NADH.
messages: Belongs to the NADH dehydrogenase family.
messages: Binds 1 FAD per subunit.
messages: Expressed in seedlings, roots, cotyledons, stems, buds and flowers and, to a lower extent, in stems and leaves.
messages: Induced by chloramphenicol (Chl), erythromycin (Ery), paraquat (Par), rotenone (Rot) and salicylic acid (SA).
messages: Lower reactive oxygen species formation and altered phenotype (e.g. growth rate, root:shoot ratios and leaf area). Lower leaf area early in development followed by a prompt subsequent increase in leaf area leading to larger leaves in mature plants. Better tolerance to salinity stress. These phenotypes are probably due to an enhanced expression of NDB2 and AOX.
messages: Mitochondrion inner membrane
messages: No effect of calcium ions on activity.
messages: Peroxisome

3702:AT3G10600
gene id: 3702:AT3G10600
uniprot id: A0A1I9LM42
uniprot id: A0A7G2ENX4
uniprot id: Q9SQZ0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Membrane
messages: Permease involved in the transport of the cationic amino acids.
messages: chloroplast membrane

3702:AT2G41490
gene id: 3702:AT2G41490
uniprot id: A0A178VV44
uniprot id: O22211
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 4 family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G05170
gene id: 3702:AT1G05170
uniprot id: A0A2H1ZEA5
uniprot id: A0A654E6W1
uniprot id: A8MRC7
uniprot id: W8Q3U9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT1G17870
gene id: 3702:AT1G17870
uniprot id: Q9LMU1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50B family.
messages: Probable membrane-associated metalloprotease that may be involved in chloroplast development.
messages: chloroplast membrane

3702:AT3G12860
gene id: 3702:AT3G12860
uniprot id: A0A384L547
uniprot id: Q9LTV0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NOP5/NOP56 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus

3702:AT2G22900
gene id: 3702:AT2G22900
uniprot id: A0A5S9X0P9
uniprot id: O81007
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 34 family.
messages: Golgi apparatus membrane
messages: Membrane
messages: Probable glycosyltransferase that may be involved in the biosynthesis of xyloglucan.

3702:AT3G04840
gene id: 3702:AT3G04840
uniprot id: A0A178VBG6
uniprot id: Q9CAV0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein eS1 family.
messages: Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S).
messages: Cytoplasm

3702:AT4G03050
gene id: 3702:AT4G03050
uniprot id: A0A5S9XPS2
uniprot id: Q9ZTA1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Tissue Specificity
messages: 2-oxoglutarate-dependent dioxygenase involved in glucosinolates biosynthesis. Catalyzes the conversion of methylsulfinylalkyl glucosinolates to hydroxyalkyl glucosinolates (By similarity).
messages: AOP1, AOP2 and AOP3 are found in tandem and inverted duplications on chromosome IV and encode 2-oxoglutarate-dependent dioxygenases involved in glucosinolates biosynthesis. In cv. Columbia, AOP2 (AC Q9ZTA2) cDNA contains a 5-bp deletion that leads to a non-functional protein and AOP3 (AC Q9ZTA1) is not expressed. The functional and expressed alleles for AOP2 (AC Q945B5) and AOP3 (AC Q945B4) are found in cv. Cvi and cv. Landsberg erecta, respectively. No ecotype coexpresses both AOP2 and AOP3 genes. The catalytic role of AOP1 is still uncertain (PubMed:11251105).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Not expressed.

3702:AT1G27960
gene id: 3702:AT1G27960
uniprot id: A0A1P8AU98
uniprot id: A0A1P8AUC1
uniprot id: A0A7G2DTN3
uniprot id: Q500V8
names: Function
names: Similarity
messages: Belongs to the YTHDF family.
messages: Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing.

3702:AT1G16030
gene id: 3702:AT1G16030
uniprot id: A0A178W9N7
uniprot id: Q9S9N1
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.
messages: By heat shock. Up-regulated by virus infection.
messages: Cytoplasm
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions.

3702:AT4G21610
gene id: 3702:AT4G21610
uniprot id: A0A178UWB7
uniprot id: A0A1P8B8B2
uniprot id: O65426
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Putative zinc finger that may be involved in programmed cell death and defense response.

3702:AT2G45200
gene id: 3702:AT2G45200
uniprot id: A0A178VWX1
uniprot id: O22151
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GOSR1 family.
messages: Component of several multiprotein Golgi SNARE complexes.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor (By similarity).
messages: Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
messages: Membrane

3702:AT2G34500
gene id: 3702:AT2G34500
uniprot id: A0A178VRK5
uniprot id: O64697
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By infection with Pseudomonas syringae.
messages: Expressed in the vascular tissues of roots, shoots and leaves. Expressed in root tips and sepals. Very low expression in stems and siliques.
messages: Membrane
messages: No visible phenotype under normal growth condition, but upon infection with P.syringae, no accumulation of stigmasterol and increased resistance to the pathogen.
messages: Plants overexpressing CYP710A1 show higher levels of stigmasterol and lower levels of beta-sitosterol than the wild-type.
messages: Required to form the C-22 double bond in the sterol side chain. Possesses in vitro C-22 desaturase activity toward beta-sitosterol and produces stigmasterol. No activity with campesterol.

3702:AT3G60540
gene id: 3702:AT3G60540
uniprot id: Q9M206
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEC61-beta family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Necessary for protein translocation in the endoplasmic reticulum.

3702:AT4G21000
gene id: 3702:AT4G21000
uniprot id: Q9SUB4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: N-glycosylated.
messages: Reversible hydration of carbon dioxide.
messages: chloroplast stroma

3702:AT2G43410
gene id: 3702:AT2G43410
uniprot id: Q8LPQ9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RRM Spen family.
messages: Expressed in roots, leaves, stems and flowers. Highest expression in flower stems and meristematic regions.
messages: Expressed throughout the plant life cycle.
messages: Late flowering.
messages: Negative feedback mediated by FPA itself.
messages: Nucleus
messages: Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for RNA-mediated chromatin silencing of a range of loci in the genome. Cotranscriptionally recognizes aberrant RNA and marks it for silencing. Controls alternative cleavage and polyadenylation on pre-mRNAs and antisense RNAs. Acts redundantly with FCA to prevent the expression of distally polyadenylated antisense RNAs at the FLC locus.
messages: While FCA requires both FY and FLD, FPA requires FLD but not FY to repress FLC.

3702:AT2G28605
gene id: 3702:AT2G28605
uniprot id: A0A178VWD5
uniprot id: Q8VY52
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbP family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast thylakoid lumen

3702:AT2G38920
gene id: 3702:AT2G38920
uniprot id: Q8GW10
names: Domain
names: Similarity
messages: Belongs to the RING-type zinc finger family.
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G32290
gene id: 3702:AT4G32290
uniprot id: A0A178UUY1
uniprot id: O49362
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G02090
gene id: 3702:AT1G02090
uniprot id: A0A178W6J6
uniprot id: A0A178W722
uniprot id: F4HVW0
uniprot id: Q94JU3
names: Caution
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CSN7/EIF3M family. CSN7 subfamily.
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of IAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Regulates the TSO2 subcellular localization. May be involved in nucleic acid binding.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8. In the CSN complex, it probably interacts directly with CSN4. Interacts (via PCI domain) with CSN1 (via PCI domain) and CSN8 (via PCI domain), and (via C-terminal tail) with CSN6A, TSO2 and RNR2A. Cannot interact simultaneously with CSN1 and CSN8 to form ternary complexes. Also exists as a monomeric form. Binds to the translation initiation factors TIF3E1 and TIF3H1 (PubMed:15548739, PubMed:19704582).
messages: Cytoplasm
messages: Nucleus
messages: Phosphorylated.
messages: The PCI domain is not sufficient to efficiently mediate CSN complex assembly and for biological activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G16195
gene id: 3702:AT4G16195
uniprot id: F4JLQ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G30910
gene id: 3702:AT2G30910
uniprot id: F4IPT5
uniprot id: O80856
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat ARPC1 family.
messages: Component of the Arp2/3 complex composed of ARP2, ARP3, ARPC1/p41-ARC, ARPC2/p34-ARC, ARPC3/p21-ARC, ARPC4/p20-ARC and ARPC5/p16-ARC.
messages: Expressed at low levels in all tissues with a relatively highest expression in inflorescences.
messages: Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
messages: Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
messages: cytoskeleton

3702:AT1G79040
gene id: 3702:AT1G79040
uniprot id: A0A384LAE0
uniprot id: P27202
uniprot id: Q0WWI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associated with the oxygen-evolving complex of photosystem II.
messages: Belongs to the psbR family.
messages: chloroplast thylakoid membrane

3702:AT5G03030
gene id: 3702:AT5G03030
uniprot id: Q9LYY2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TIM14 family.
messages: Component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.
messages: Mitochondrion
messages: Mitochondrion inner membrane
messages: Probable component of the PAM complex at least composed of a mitochondrial HSP70 protein, TIMM44 and TIMM14. The complex interacts with the TIMM23 component of the TIM17:23 complex (By similarity).

3702:AT2G17320
gene id: 3702:AT2G17320
uniprot id: A0A178VQN4
uniprot id: A0A384L0N0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G13990
gene id: 3702:AT4G13990
uniprot id: Q84R16
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Expressed in roots, hypocotyls, cotyledons, leaves, stems, stamens and carpels.
messages: Functions in xyloglucan synthesis by adding side chains to the xylosylated glucan backbone. Involved in the galactosylation of hemicellulose xyloglucan.
messages: Golgi apparatus membrane

3702:AT1G21560
gene id: 3702:AT1G21560
uniprot id: A0A384LKJ3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G05770
gene id: 3702:AT1G05770
uniprot id: Q9MA49
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT3G02410
gene id: 3702:AT3G02410
uniprot id: Q1PET6
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AB hydrolase superfamily. Isoprenylcysteine methylesterase family.
messages: Catalyzes the demethylation of isoprenylcysteine methylesters (By similarity). May act as a negative regulator of ABA signaling (PubMed:20868530).
messages: Endoplasmic reticulum membrane
messages: Expressed at low levels in flowers and siliques.
messages: Golgi apparatus membrane
messages: Increased sensitivity to abscissic acid (ABA) but slightly decreased sensitivity to salt and osmotic stresses during seed germination.
messages: Plants silencing ICMEL2 show enhanced ABA inhibition of seed germination.

3702:AT5G46220
gene id: 3702:AT5G46220
uniprot id: Q6DBD7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the alkaline ceramidase family.
messages: Endoplasmic reticulum ceramidase that catalyzes the hydrolysis of ceramides into sphingosine and free fatty acids at alkaline pH (e.g. pH 9.5) (PubMed:25591940). Inactive on phytoceramide (PubMed:25591940). Involved in the regulation of turgor pressure in guard cells and pollen tubes (PubMed:25591940).
messages: Golgi apparatus membrane
messages: Increased turgor in pollen tubes associated with altered and delayed pollen tubes growth (PubMed:25591940). Short siliques resulting from severe sterility (PubMed:25591940). Insensitivity to abscisic acid (ABA)-induced stomatal closure in guard cells (PubMed:25591940). These phenotypes are partially restored by the disruption of GAUT13 (PubMed:25591940).
messages: Preferentially expressed in pollen grains, pollen tubes and silique guard cells, but barely detectable in roots, stems and leaves.

3702:AT1G68190
gene id: 3702:AT1G68190
uniprot id: Q9C9F4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Lacks the conserved CCT domain, which is one of the features of the CONSTANS family.
messages: Nucleus

3702:AT2G27020
gene id: 3702:AT2G27020
uniprot id: A0A178VXR9
uniprot id: A0A1P8AX55
uniprot id: O23715
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Induced by the endoparasitic nematode M.incognita. Levels increase after infection in both giants cells and endodermal cells of galls. Later confined to giant cells at high levels.
messages: Lethal due to defect in male gametogenesis.
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Ubiquitous low levels.

3702:ArthCp011
gene id: 3702:ArthCp011
uniprot id: A0A1B1W4T3
uniprot id: P56797
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS2 family.
messages: chloroplast

3702:AT2G43760
gene id: 3702:AT2G43760
uniprot id: A0A178VNE3
uniprot id: O22827
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MoaE family. MOCS2B subfamily.
messages: Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
messages: Cytoplasm
messages: Heterotetramer; composed of 2 small (MOCS2A) and 2 large (MOCS2B) subunits.

3702:AT2G28890
gene id: 3702:AT2G28890
uniprot id: Q9ZV25
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Expressed in seedlings, roots, leaves, stems, young inflorescences, flowers and siliques.
messages: Involved in leaf development regulation.
messages: Nucleus
messages: Plants show abnormal leaves altered in shape and curling.
messages: The conserved PP2C phosphatase domain (244-643) is interrupted by an insertion of approximately 100 amino acids.

3702:AT3G23020
gene id: 3702:AT3G23020
uniprot id: Q9LS88
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G11240
gene id: 3702:AT1G11240
uniprot id: A0A654E8Y1
uniprot id: Q8W494
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRP17 family.
messages: nucleolus

3702:AT3G24130
gene id: 3702:AT3G24130
uniprot id: Q4PSN0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in flower buds.
messages: cell wall

3702:AT3G07390
gene id: 3702:AT3G07390
uniprot id: A0A178VEI7
uniprot id: Q94BT2
names: Caution
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Binds 1 heme group non-covalently.
messages: Cell membrane
messages: DOMON domain could bind one heme b.
messages: Expressed during auxin-induced lateral root formation.
messages: Induced between 4 and 8 hours after treatment with auxin and remains high for at least 24 hours.
messages: One-heme-containing cytochrome.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G54640
gene id: 3702:AT5G54640
uniprot id: A0A178UIB7
uniprot id: Q9LD28
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H2A family.
messages: By phytohormones. Transiently by wounding.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Required for the T-DNA integration step of plant transformation by Agrobacterium. May play an important role in illegitimate recombination.
messages: Low level of expression, mainly in dividing tissues: floral buds, margins of newly emerging leaves, expanding leaves and the meristematic zone of root tips. Also expressed in many non-dividing cells of the elongation zone of the root.
messages: Not ubiquitinated.
messages: Nucleus
messages: RAT5 is required for Agrobacterium-mediated transformation of root but not of germ-lime tissues.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. Interacts with VIP1.

3702:AT2G24130
gene id: 3702:AT2G24130
uniprot id: A0A1P8B036
uniprot id: Q9ZUI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT3G54490
gene id: 3702:AT3G54490
uniprot id: A0A5S9XMG6
uniprot id: Q9M1H8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the archaeal Rpo5/eukaryotic RPB5 RNA polymerase subunit family.
messages: Component of the RNA polymerase V complex.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase V involved in RNA-directed DNA methylation-dependent (RdDM) silencing of endogenous repeated sequences, including transposable elements.
messages: Expressed in flower buds and siliques.
messages: Nucleus

3702:AT1G20340
gene id: 3702:AT1G20340
uniprot id: A0A178WAZ3
uniprot id: P42699
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plastocyanin family.
messages: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.
messages: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Seems to be the major plastocyanin in Arabidopsis.
messages: The crystal structure with reduced Cu(1+) has also been determined.
messages: Was originally thought to be involved in the resistance to UV light and chemical DNA-damaging agents.
messages: chloroplast thylakoid membrane

3702:AT5G63460
gene id: 3702:AT5G63460
uniprot id: A0A178UIX2
uniprot id: F4KAQ0
uniprot id: F4KAQ2
uniprot id: Q6IDA6
names: Similarity
messages: Belongs to the DDA1 family.

3702:AT4G09130
gene id: 3702:AT4G09130
uniprot id: Q9M0R4
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G12560
gene id: 3702:AT4G12560
uniprot id: Q9SU30
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Regulates negatively both salicylic acid (SA)-dependent and SA-independent defense signaling.
messages: Cytoplasm
messages: Expressed in seedling, root, stem, leaves, inflorescence and silique, especially in veins and trichomes.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1, SPK1B/ASK2, ASK9, ASK10, ASK11, ASK13, ASK14, ASK16, ASK17, ASK18 and ASK19. Interacts with TRAF1B (PubMed:26867179).
messages: Temperature dependent; normal at high temperature (above 28 degrees Celsius), but in colder temperature, dwarf morphology, constitutive resistance to the bacterial pathogen Pseudomonas syringae, and induction of defense-response gene expression such as PR-30.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT2G25360
gene id: 3702:AT2G25360
uniprot id: Q9SKL2
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT3G46110
gene id: 3702:AT3G46110
uniprot id: A0A1I9LLA9
uniprot id: A0A654FI85
uniprot id: Q8GY65
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Soseki' means cornerstone in Japanese.
messages: Belongs to the SOSEKI family.
messages: Cell membrane
messages: During embryogenesis, first observed at the globular stage and accumulates in cells next to the suspensor, including lens-shaped cells (PubMed:30737509). Observed at low levels in few vascular cells of the primary root (PubMed:30737509). Also expressed in lateral root (PubMed:30737509).
messages: Expressed during embryogenesis and in roots.
messages: Homodimer (By similarity). Forms long polymer filaments with other SOKs proteins polymers (e.g. SOK1, SOK2, SOK3 and SOK4) crucial for polar localization and biological activity (PubMed:32004461). Binds to ANGUSTIFOLIA (AN) (PubMed:32004461).
messages: Membrane
messages: SOSEKI proteins (SOK1-5) locally interpret global polarity cues and can influence cell division orientation to coordinate cell polarization relative to body axes, probably by guiding ANGUSTIFOLIA (AN) polarized localization (PubMed:30737509). Positive regulator of auxin (indole-3-acetic acid, IAA) biosynthesis and signaling pathway leading to the modulation of seedling growth, plant and inflorescence development (PubMed:31207460). Negative regulator of stress responses (e.g. salinity and osmotic stress) (PubMed:31207460).
messages: The DIX-like oligomerization domain is required for polymerization, edge localization and biological activity.

3702:AT5G50080
gene id: 3702:AT5G50080
uniprot id: G8IQH2
uniprot id: Q70II3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G61940
gene id: 3702:AT1G61940
uniprot id: O80699
names: Similarity
messages: Belongs to the TUB family.

3702:AT5G07040
gene id: 3702:AT5G07040
uniprot id: Q9FL42
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT3G47190
gene id: 3702:AT3G47190
uniprot id: F4JAD4
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT4G19660
gene id: 3702:AT4G19660
uniprot id: Q5ICL9
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Enhanced susceptibility to the virulent bacterial pathogen Pseudomonas syringe and to the fungal pathogen Erysiphe cichoracearum (powdery mildew).
messages: Interacts with TGA2, TGA3, TGA5, TGA6 and TGA7.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Involved in the regulation of basal defense responses against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways.
messages: Nucleus
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Up-regulated following pathogen challenge or salicylic acid (SA) treatment, and down-regulated by methyl jasmonic acid (MeJA) treatment.

3702:AT4G19400
gene id: 3702:AT4G19400
uniprot id: Q29Q75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the profilin family.
messages: cytoskeleton

3702:AT2G35310
gene id: 3702:AT2G35310
uniprot id: Q5PNU4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G10370
gene id: 3702:AT5G10370
uniprot id: F4KGU4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. DEAH subfamily.
messages: chloroplast

3702:AT3G12040
gene id: 3702:AT3G12040
uniprot id: A0A178VCT9
uniprot id: A0A1I9LNN7
uniprot id: Q39147
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DNA glycosylase MPG family.
messages: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, and 7-methylguanine from the damaged DNA polymer formed by alkylation lesions.
messages: Nucleus

3702:AT5G38430
gene id: 3702:AT5G38430
uniprot id: A0A5S9YBC0
uniprot id: P10796
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Heterohexadecamer of 8 large and 8 small subunits (PubMed:29372894). Interacts with RBCX2 (PubMed:21922322).
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: There are four genes coding for RBS in Arabidopsis thaliana.
messages: chloroplast

3702:AT5G14500
gene id: 3702:AT5G14500
uniprot id: A0A178UNA1
uniprot id: A0A1P8BFM5
uniprot id: Q5EAF4
names: Caution
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G14810
gene id: 3702:AT1G14810
uniprot id: A0A178W3P2
uniprot id: Q8VYI4
names: Similarity
names: Subunit
messages: Belongs to the aspartate-semialdehyde dehydrogenase family.
messages: Homodimer.

3702:AT5G22960
gene id: 3702:AT5G22960
uniprot id: A0A654G3K1
uniprot id: Q9FFB2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S10 family.
messages: Could be the product of a pseudogene.
messages: Lacks the second part of the protein and the active site Asp and His residues which is a conserved feature of peptidase S10 family.
messages: Secreted

3702:AT4G28890
gene id: 3702:AT4G28890
uniprot id: Q5XF85
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G03040
gene id: 3702:AT5G03040
uniprot id: Q93ZH7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus
messages: cytoskeleton

3702:AT4G03430
gene id: 3702:AT4G03430
uniprot id: Q9ZT71
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cajal body
messages: Component of a pre-mRNA splicing complex (PubMed:23877244). Interacts with ZOP1 (PubMed:23524848). Interacts with PRP31 (PubMed:25684655).
messages: Lethal when homozygous.
messages: Nucleus
messages: Pre-mRNA splicing factor required for splicing and for the turnover of unstable transcripts. May be a U5 snRNP-associated protein involved in the formation of U4/U6-U5 tri-snRNP. Involved in responses to abiotic stresses. Involved in microRNAs (miRNAs) biogenesis by functioning in primary miRNAs (pri-miRNAs) splicing. Required for DNA methylation and transcriptional silencing through the RNA-directed DNA methylation (RdDM) pathway.
messages: The sta1-1 mutation causes the stabilization of the normally unstable STA1 transcript (PubMed:16751345) and increases the expression levels of miRNA target genes (PubMed:23268445).
messages: Ubiquitous.
messages: Up-regulated by cold stress, but not by abscisic acid or salt treatment.

3702:AT3G11270
gene id: 3702:AT3G11270
uniprot id: A0A654F7S1
uniprot id: F4J683
uniprot id: Q9C774
names: Function
names: Similarity
names: Subunit
messages: Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the peptidase M67A family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.

3702:AT1G76900
gene id: 3702:AT1G76900
uniprot id: A0A178WI43
uniprot id: Q9ZP59
names: Similarity
names: Tissue Specificity
messages: Belongs to the TUB family.
messages: Ubiquitous.

3702:AT1G17980
gene id: 3702:AT1G17980
uniprot id: A0A178W197
uniprot id: Q9LMT2
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the poly(A) polymerase family.
messages: Binds 2 magnesium ions. Also active with manganese.
messages: Essential protein (PubMed:19956626). Polymerase that creates the 3'-poly(A) tail of mRNA's (PubMed:15297145). Also required for the endoribonucleolytic cleavage reaction at some polyadenylation sites. May acquire specificity through interaction with a cleavage and polyadenylation specificity factor (CPSF) at its C-terminus (By similarity).
messages: Expressed in stems, cotyledons, hypocotyls, radicle, leaves, and, to a lower extent, in roots (including primary and secondary roots as well as root tips) and flowers (PubMed:15297145, PubMed:19956626). In radicle, roots and leaves, mainly present in vascular tissues (PubMed:19956626).
messages: Lethal.
messages: Monomer (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunit PAPS4 (PubMed:18479511).
messages: Nucleus
messages: Polymerase that creates the 3'-poly(A) tail of mRNA's.

3702:AT4G22115
gene id: 3702:AT4G22115
uniprot id: A0A178UVN7
uniprot id: P82633
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G66730
gene id: 3702:AT1G66730
uniprot id: F4HPZ9
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ATP-dependent DNA ligase family.
messages: DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (Probable). Required to maintain seed viability (e.g. longevity and storability) and during seed germination, probably by repairing DNA damage accumulated during seed development, storage and/or imbibition. Facilitates seed germination in cold conditions (2 degrees Celsius) and under oxidative stress (e.g. menadione, a genotoxic agent). Involved in repair of X-ray-induced damage (PubMed:20584150).
messages: Induced by UV-C (PubMed:15155891). Induced during seed imbibition (PubMed:20584150). Induced slightly by bleomycin (BLM), a radiomimetic reagent that generates DNA double-strand breaks (DSBs) (PubMed:26074930).
messages: Limits stable root transformation by A.tumefaciens T-DNA.
messages: Mostly expressed in buds and flowers, and, to a lower extent, in stems, leaves, siliques and seeds.
messages: Normal vegetative growth and fertility. Slightly enhanced sensitivity to X-rays, leading to a slight root growth reduction after 100-Gy dose of X-ray irradiation. Delayed germination of seeds, especially upon cold and oxidative stress (e.g. by menadione, a genotoxic agent), and reduced seed longevity and storability. Increased DNA damage response in germinating seeds, probably due to accumulation of DNA damage in seeds (PubMed:20584150). Increased stable root transformation susceptibility by A.tumefaciens A208 T-DNA (PubMed:25641249).
messages: Nucleus

3702:AT3G57740
gene id: 3702:AT3G57740
uniprot id: A0A178VE74
uniprot id: A0A384LKD8
names: Caution
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. ZRK subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G22985
gene id: 3702:AT1G22985
uniprot id: A0A178W874
uniprot id: Q8W4I5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G46430
gene id: 3702:AT5G46430
uniprot id: A0A178UGP2
uniprot id: Q9FHG2
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL32 family.

3702:AT3G48870
gene id: 3702:AT3G48870
uniprot id: A0A5S9XJ62
uniprot id: F4JF64
uniprot id: Q9SXJ7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ClpA/ClpB family.
messages: Belongs to the ClpA/ClpB family. ClpC subfamily.
messages: By senescence. Not induced by heat stress.
messages: Expressed at low levels in roots and inflorescences (PubMed:15659100). Expressed at very low levels in rosette leaves (PubMed:15659100). Expressed in photosynthetic green tissues with high levels in young, developing leaf tissues (PubMed:23898032).
messages: Homodimer and homohexamer (PubMed:21737456). Hexamerization upon addition of ATP (PubMed:21737456). Interacts with CLPT1 (PubMed:25149061). Interacts with CLPS1 (PubMed:23898032). Stably associated with the import machinery (PubMed:21737456). Interacts with CLPF (PubMed:26419670).
messages: Molecular chaperone (PubMed:15304652, PubMed:21737456, PubMed:24599948). May act as a suppressor of FtsH-mediated thylakoid membrane biogenesis and may enhance photoinhibition (PubMed:15304652). Seems not involved in chloroplastic protein import (PubMed:15304652). Probable component of the TIC-associated stromal import motor involved in inner membrane translocation (PubMed:17376159). Has an ATPase activity, but no ADPase activity (PubMed:21737456). Interacts with transit peptides with a positional preference (PubMed:21737456, PubMed:22545953). Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place (PubMed:22545953).
messages: No visible phenotype (PubMed:17376159). Clpc1 and clpc2 double mutants are embryo lethal when homozygous (PubMed:17376159).
messages: chloroplast membrane
messages: chloroplast stroma

3702:AT4G15300
gene id: 3702:AT4G15300
uniprot id: A0A1P8B5L1
uniprot id: A0A1P8B5L5
uniprot id: O23384
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G49860
gene id: 3702:AT5G49860
uniprot id: A0A178U7Z5
uniprot id: Q9LTA7
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT3G24310
gene id: 3702:AT3G24310
uniprot id: A0A384L796
uniprot id: Q9LK14
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G41220
gene id: 3702:AT2G41220
uniprot id: Q9T0P4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glutamate synthase family.
messages: Binds 1 [3Fe-4S] cluster.
messages: Expressed predominantly in roots and slightly in leaves. Low expression in the leaf mesophyll and phloem companion cell-sieve element complex.
messages: May play a role in primary nitrogen assimilation in roots. Could supply a constitutive level of glutamate to maintain a basal level of protein synthesis.
messages: No visible phenotype. The glutamate and glutamine levels were unaffected.
messages: chloroplast stroma

3702:AT3G54820
gene id: 3702:AT3G54820
uniprot id: A0A5S9XKZ5
uniprot id: Q9SV31
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.
messages: Cell membrane
messages: Expressed in green siliques.
messages: Membrane

3702:AT2G29440
gene id: 3702:AT2G29440
uniprot id: A0A178VUQ0
uniprot id: Q9ZW26
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: Is involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT1G55510
gene id: 3702:AT1G55510
uniprot id: Q9SAV3
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Heterotetramer of alpha and beta chains.
messages: Mitochondrion matrix
messages: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).

3702:AT3G48460
gene id: 3702:AT3G48460
uniprot id: A0A178VFS3
uniprot id: Q9STM6
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G69810
gene id: 3702:AT1G69810
uniprot id: A0A1P8AQG7
uniprot id: A0A654EMM9
uniprot id: Q058I4
uniprot id: Q9CAR4
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT4G20920
gene id: 3702:AT4G20920
uniprot id: A0A1P8B4L0
uniprot id: F4JVP4
names: Similarity
messages: Belongs to the methyltransferase superfamily. HEN1 family.

3702:AT5G54380
gene id: 3702:AT5G54380
uniprot id: Q9LK35
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By brassinosteroids (BR).
messages: Cell membrane
messages: Expressed in most vegetative tissues, including leaves, stems and roots, primarily in expanding cells and vascular tissue.
messages: No visible phenotype; due to redundancy with HERK1. Herk1 and the1 double mutants are stunted. In the1-4, shorter hypocotyls without brassinolide (BL) treatment. In the1-3, partially restored hypocotyl growth defect of prc1-8 and of other cellulose-deficient mutants.
messages: Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner. Mediates the response of growing plant cells to the perturbation of cellulose synthesis and may act as a cell-wall-integrity sensor. Controls ectopic-lignin accumulation in cellulose-deficient mutant backgrounds.
messages: Semidominant suppressor of the cellulose-deficient mutant procuste1-1.
messages: This protein was called 'Theseus' after the Greek mythological figure Theseus, who slew the brigand Procustes.

3702:AT2G45180
gene id: 3702:AT2G45180
uniprot id: A0A178VQF0
uniprot id: Q42044
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT4G24940
gene id: 3702:AT4G24940
uniprot id: Q8VY78
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin-activating E1 family.
messages: Heterodimer of SAE1A or SAE1B and SAE2. The complex binds SUMO proteins via SAE2 (By similarity).
messages: No visible phenotype.
messages: Nucleus
messages: The dimeric enzyme acts as an E1 ligase for SUMO1 and SUMO2. It mediates ATP-dependent activation of SUMO proteins and formation of a thioester with a conserved cysteine residue on SAE2. Functionally redundant with its paralog SAE1B.

3702:AT4G02280
gene id: 3702:AT4G02280
uniprot id: A0A384L6N1
uniprot id: Q9M111
uniprot id: W8Q6L8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.
messages: By drought stress. By mannitol, an osmotic agent. Positively regulated by LEC2.
messages: Detected in the whole plant with highest expression in developing siliques, vasculature of cotyledons and stomatal guard cells. Also detected throughout the mature parts of the root but not in the expanding zone.
messages: Highly expressed in late-maturing seeds and in geminating seeds (at the protein level).
messages: No visible phenotype. Diminution of the starch content of developing seeds and increased lipid accumulation early during seed development.
messages: Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.
messages: Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Modulates metabolic homeostasis and direct carbon towards starch synthesis in developing seeds.

3702:AT3G50480
gene id: 3702:AT3G50480
uniprot id: Q9SCS6
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant RPW8 protein family.
messages: Ecotypes susceptible to Erysiphe cichoracearum, such as cv. Columbia, are lacking RPW8.1 and RPW8.2 but contain in place HR4.
messages: Expressed in leaves after powdery mildew infection (e.g. Erysiphe cichoracearum UCSC1) (PubMed:15155802). Accumulates upon oviposition by pierid butterflies (e.g. Pieris brassicae) (PubMed:17142483). Induced in seedlings by the beneficial symbiotic fungus Trichoderma atroviride and, by the plant growth-promoting rhizobacterium (PGPR) Pseudomonas fluorescens after a transient repression (PubMed:22942755). Expressed after infection by the bacterial pathogenic Pseudomonas syringae pv. tomato DC3000 (PubMed:22942755). Triggered by various phytohormones such as ethylene (ET), salicylic acid (SA) and methyl jasmonate (MeJA) (PubMed:22942755).
messages: Membrane
messages: Probable disease resistance (R) protein.

3702:AT2G21130
gene id: 3702:AT2G21130
uniprot id: A0A5S9WZY7
uniprot id: Q9SKQ0
names: Activity Regulation
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Binds cyclosporin A (CsA). CsA mediates some of its effects via an inhibitory action on PPIase (By similarity).
messages: Cytoplasm
messages: Mostly expressed in young tissues. Expressed in all parts of floral buds, but later confined to stigma and anthers.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: Widely expressed in aerial organs, at high levels in young rosette leaves and flowers, at low levels in older tissues.

3702:AT1G55570
gene id: 3702:AT1G55570
uniprot id: Q9ZVV4
names: Similarity
messages: Belongs to the multicopper oxidase family.

3702:AT3G56040
gene id: 3702:AT3G56040
uniprot id: F4IY62
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UDPGP type 1 family.
messages: Induced by phosphate starvation.
messages: Inhibited by pyrophosphate.
messages: Involved in the biosynthesis of sulfolipids in the chloroplast. Catalyzes the first committed step in sulfolipid biosynthesis. Converts glucose 1-phosphate to UDP-glucose, the precursor of the polar head of sulfolipid. In addition to glucose 1-phosphate, can use galactose 1-phosphate, but with much lower activity. No uridyltransferase activity with other hexose monophosphates. Specific for UTP and cannot use ATP, CTP, and GTP.
messages: chloroplast

3702:AT1G60913
gene id: 3702:AT1G60913
uniprot id: A0A5S9WSN0
uniprot id: A8MRK3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT3G14950
gene id: 3702:AT3G14950
uniprot id: F4IXE4
names: Disruption Phenotype
names: Function
names: Induction
names: Tissue Specificity
messages: Decreased efficiency of the male gametophyte transmission and reduced fertility.
messages: Not induced by salt treatment.
messages: Plays a role in the transmission of male gametophyte.
messages: Specifically expressed in pollen grains.

3702:AT1G25440
gene id: 3702:AT1G25440
uniprot id: Q5XF38
uniprot id: Q8RWD0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Nucleus

3702:AT1G06450
gene id: 3702:AT1G06450
uniprot id: Q9SHJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).

3702:AT2G03550
gene id: 3702:AT2G03550
uniprot id: Q9ZQ91
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in leaves, stems, flowers and siliques.

3702:AT1G79130
gene id: 3702:AT1G79130
uniprot id: A0A178W9C0
uniprot id: O64538
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ARG7 family.
messages: Cytoplasm
messages: Interacts with and inhibits PP2C-D subfamily of type 2C phosphatases such as PP2C67/PP2C-D1.
messages: Provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), and triggers PM H(+)-ATPases activity by promoting phosphorylation of their C-terminal autoinhibitory domain as a result of PP2C-D subfamily of type 2C phosphatases inhibition, thus leading to the acidification of the apoplast and the facilitation of solutes and water uptake to drive cell expansion (PubMed:24858935). Plays a role in the regulation of cell expansion, root meristem patterning and auxin transport (By similarity).

3702:AT5G49150
gene id: 3702:AT5G49150
uniprot id: F4K4R6
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: In tricellular pollen, expressed in mature sperm cells but not in the vegetative cell. In bicellular pollen, detected in the progenitor generative cell. Detected in the egg cell within the female gametophyte.

3702:AT4G36380
gene id: 3702:AT4G36380
uniprot id: A0A178V4B0
uniprot id: Q9M066
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Involved in brassinosteroid (BR) biosynthesis (PubMed:15703058, PubMed:17138693). Converts typhasterol (TY) to cathasterone (CS) and 6-deoxotyphasterol (6-deoxoTY) to 6-deoxocathasterone (6-deoxoCT) (PubMed:15703058). C-23 hydroxylase that converts directly (22S,24R)-22-hydroxy-5-alpha-ergostan-3-one and 3-epi-6-deoxocathasterone to 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo3DHT) and 6-deoxotyphasterol (6-deoxoTY), respectively (PubMed:17138693). These C-23 hydroxylation shortcuts bypass campestanol, 6-deoxocathasterone, and 6-deoxoteasterone (6-deoxoTE) (PubMed:17138693). Catalyzes also the conversion of cathasterone to teasterone (TE), (22S,24R)-22-hydroxyergost-4-en-3-one (22-OH-4-en-3-one) to (22R,23R)-22,23-dihydroxy-campest-4-en-3-one (22,23-diOH-4-en-3-one) and (22S)-22-hydroxycampesterol (22-OHCR) to (22R,23R)-22,23-dihydroxycampesterol (22,23-diOHCR) (PubMed:17138693). Required for the regulation of polar elongation of leaf cells (PubMed:9694802, PubMed:10430960). Required for the longitudinal elongation of floral organs (PubMed:10430960).
messages: Plants with short petioles and round leaves. Altered polar elongation of leaf cells (PubMed:9694802). The double mutant plants cyp90c1 and cyp90d1 exhibit a characteristic brassinosteroid-deficient dwarf phenotype (PubMed:15703058).
messages: Widely expressed.

3702:AT2G02170
gene id: 3702:AT2G02170
uniprot id: A0A1P8B0S4
uniprot id: Q9ZUM1
names: Similarity
messages: Belongs to the remorin family.

3702:AT1G55540
gene id: 3702:AT1G55540
uniprot id: F4I1T7
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Contains FG repeats mediating the translocation through the NPC by interacting with transport factors.
messages: Highly expressed in reproductive tissues, such as flowers and early developing seeds. Detected at low levels in vegetative tissues, such as leaves, shoots, stems or roots. Expressed in anthers, stigma papilla, embryo and endosperm.
messages: Lethal when homozygous. Knockdown alleles have no obvious defect in growth and development.
messages: Named LONO after an Hawaiian god associated with fertility, agriculture, rainfall and music.
messages: Nucleus envelope
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins Interacts (via N-terminus) with RH38.
messages: Required for normal embryogenesis and seed viability. Involved in the first asymmetrical cell division of the zygote. Regulates the number and planes of cell divisions required for generating the normal embryo proper and suspensor, apical-basal axis, cotyledons and meristem.
messages: nuclear pore complex

3702:AT5G35630
gene id: 3702:AT5G35630
uniprot id: A0A384L697
uniprot id: B9DGD1
uniprot id: Q43127
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamine synthetase family.
messages: By light, sucrose, glucose and fructose.
messages: Expressed in mesophyll and epidermal cells of leaves.
messages: Homooctamer.
messages: Mitochondrion
messages: The light-modulated chloroplast/mitochondrial enzyme, encoded by a nuclear gene and expressed primarily in leaves, is responsible for the reassimilation of the ammonia generated by photorespiration.
messages: chloroplast

3702:AT1G34790
gene id: 3702:AT1G34790
uniprot id: A0A654ER07
uniprot id: Q8VWG3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Can form homodimers. Interacts with MYB75, TT2 and TT16.
messages: Developing ovules and young seeds.
messages: Lack of flavanoid pigment accumulation in the seed coat endothelium (transparent testa phenotype).
messages: May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat (PubMed:21477081). Plays a role in the regulatory network controlling flavonoid accumulation in endothelium cells during seed development (PubMed:21477081).
messages: Nucleus
messages: Restricted to the endothelium, the innermost cell layer of the seed coat and detected to a lesser extent in the other cell layers of the testa.

3702:AT4G13720
gene id: 3702:AT4G13720
uniprot id: A0A1P8B687
uniprot id: A0A5S9XTT2
uniprot id: Q8L968
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAM1 NTPase family.
messages: Binds 1 divalent metal cation per subunit; can use either Mg(2+) or Mn(2+).
messages: Cytoplasm
messages: Homodimer.
messages: Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions.

3702:AT2G38740
gene id: 3702:AT2G38740
uniprot id: Q9ZVJ5
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Acts as a phosphosugar phosphatase on a broad range of sugar phosphate substrates with preferential activity on D-ribose-5-phosphate, 2-deoxy-D-ribose-5-phosphate, 2-deoxy-D-glucose-6-phosphate, and D-mannose-6-phosphate and with a lower activity on D-fructose-1-phosphate, D-glucose-6-phosphate, DL-glycerol-3-phosphate, and D-fructose-6-phosphate.
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.
messages: Induced by NaCl and sorbitol.
messages: Ubiquitous with highest expression in flowers.

3702:AT1G21310
gene id: 3702:AT1G21310
uniprot id: Q9FS16
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the extensin family.
messages: By wounding, water and cold stresses; in response to plant hormones 2,4-D, BAP, GA3, and ABA treatment; in response to L-Ser, Hyp and L-Pro treatment. Slightly repressed by salt stress.
messages: Chimeric cDNA. Its C-terminal part is derived from the gene At2g20230.
messages: Early expressed in the whole plant, but was restricted to lower stems, flower buds and roots in the mature plant (6 weeks old) (PubMed:11475326). Detected in cells throughout the embryo, including the suspensor, from the 32-cell stage, with expression increasing up to the torpedo stage, followed by a decrease at the bent-cotyledon stage, with little or no expression detectable in the nearly mature cotyledon stage of development (PubMed:12034904).
messages: Embryo lethality. Germination-defective agravitropic seedlings with severely defective root, shoot, and hypocotyl and a vitreous appearance throughout (PubMed:12034904). Defective Cell Walls (PubMed:18256186).
messages: Predominantly expressed in the roots.
messages: Structural component which strengthens the primary cell wall (PubMed:11475326). Forms dendritic structures indicating a propensity for self-assembly through tyrosine cross-linking (PubMed:18256186, PubMed:21415277). Forms intermolecular cross-links exclusively by pulcherosine (three Tyr) (PubMed:18256186). Scaffold formation requires an unobstructed C-terminus of EXT3 (PubMed:18256186). Required for the correct positioning of the cell plate during cytokinesis in cells of the developing embryo (PubMed:12034904). Extensins contain a characteristic repeat of the pentapeptide Ser-Pro(4). For this particular extensin, a typical repeat of Ser-Pro(3) is found (PubMed:11475326).
messages: Synthetised as soluble proteins which become insolubilised in the cell wall through the intermolecular cross-linking of Tyr on adjacent monomers. Isodityrosine (IDT) stabilizes and makes rigid the part of the polypeptide where IDT functional sites are present.
messages: The proline residues of the Ser-Pro(3) repeats are hydroxylated and then O-glycosylated (arabinosylation) by HPAT1, HPAT2 and HPAT3 (PubMed:24036508). Around 20% of Hyp units are in the nonglycosylated form (PubMed:18256186). The Ser residues are O-galactosylated (Ref.9, PubMed:25944827). The lack of Ser-O-galactosylation does not affect Hyp-O-arabinosylation, but both types of O-glycosylation are central for the functionality of the protein (PubMed:25944827). Correct Hyp-O-arabinosylation appears to be responsible for generating a bend on the EXT3 backbone around a YVY motif, which may represent a better scenario for Tyr intramolecular cross-links (isodityrosine type) (PubMed:25944827).
messages: Truncated cDNA resulting of the removal of two cryptic introns in the genomic sequence.
messages: primary cell wall

3702:AT3G08940
gene id: 3702:AT3G08940
uniprot id: Q9XF88
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: May be due to an intron retention.
messages: Photoregulated by reversible phosphorylation of its threonine residues.
messages: The LHC complex consists of chlorophyll a-b binding proteins.
messages: The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: This protein is phosphorylated under normal plant growth conditions, whereas phosphorylation of maize CP29 was induced only by high light in the cold.
messages: chloroplast thylakoid membrane

3702:AT1G08670
gene id: 3702:AT1G08670
uniprot id: A0A178WGB3
uniprot id: A0A1P8ART5
uniprot id: Q9FRR8
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: Vesicle
messages: clathrin-coated vesicle

3702:AT1G05310
gene id: 3702:AT1G05310
uniprot id: O23038
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in siliques.
messages: Expressed throughout silique development.
messages: cell wall

3702:AT3G28390
gene id: 3702:AT3G28390
uniprot id: Q9LSJ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT4G17500
gene id: 3702:AT4G17500
uniprot id: O80337
names: Caution
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Induced by Pseudomonas syringae tomato (both virulent and avirulent avrRpt2 strains), independently of PAD4. Also induced by methyl jasmonate (MeJA) independently of JAR1. Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2), whereas induction by wounding does not need EIN2. Induction by salicylic acid (SA) seems to be independent of PAD4 and NPR1. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress.
messages: It is uncertain whether Met-1 or Met-3 is the initiator.
messages: Nucleus
messages: The AP2/ERF domain binds specifically to the 5'-GCCGCC-3' motif. The affinity of this binding is higher if the seventh amino-acid of this domain is basic (By similarity).
messages: Two different genes At3g23240 and At4g17500 were assigned the same gene name ERF1.
messages: Ubiquitously expressed, mostly in flowers and rosettes after ethylene treatment.

3702:AT5G46360
gene id: 3702:AT5G46360
uniprot id: A0A5S9YBI5
uniprot id: Q9XFR0
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the two pore domain potassium channel (TC 1.A.1.7) family.
messages: Expressed in hydathodes and the vascular tissues of roots, stems, leaves and flowers.
messages: Homotetramer.
messages: KCO3 shares similarity to the TPK family (2P/4TM) but lacks the conserved internal part including one pore-forming region and two transmembrane segments. As a result and according to its structure, KCO3 could also be classified as a member of the IRK family (1P/2TM).
messages: Membrane
messages: Probable calcium-activated potassium channel.
messages: The pore-forming region (also called P-domain or P-loop) is enclosed by two transmembrane segments (1P/2TM) and contains a pseudo GYGD signature motif such as GYFD which seems to be involved in potassium selectivity.
messages: Vacuole membrane

3702:AT4G34780
gene id: 3702:AT4G34780
uniprot id: Q9SW56
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G61960
gene id: 3702:AT5G61960
uniprot id: Q8W4I9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Tissue Specificity
messages: Early flowering.
messages: Expressed in roots, shoots, leaves, flowers and siliques.
messages: Expressed in the embryo at the heart and torpedo stages. Weakly expressed throughout the vegetative shoot apex. Highly expressed in organogenic regions of floral apices.
messages: Probable RNA-binding transcriptional activator that plays a role in meiosis and vegetative growth. May be a downstream effector of TOR signaling pathway and recruited by RAPTOR1 for TOR substrate.

3702:AT5G08565
gene id: 3702:AT5G08565
uniprot id: A0A178UPE0
uniprot id: F4KB46
uniprot id: Q8LCQ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SPT4 family.
messages: May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (By similarity).
messages: May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex.
messages: Nucleus

3702:AT5G46877
gene id: 3702:AT5G46877
uniprot id: Q2V309
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT3G02620
gene id: 3702:AT3G02620
uniprot id: A0A178VGR6
uniprot id: A0A1I9LTN9
uniprot id: A0A384KYA0
uniprot id: Q9M880
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 2 family.
messages: Binds 2 Fe(2+) ions per subunit.
messages: Binds 2 iron ions per subunit.
messages: Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons 9 and 10 of the acyl chain.
messages: Homodimer.
messages: No visible phenotype.
messages: Preferentially expressed in roots.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G33030
gene id: 3702:AT1G33030
uniprot id: A0A178WB86
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G36060
gene id: 3702:AT4G36060
uniprot id: A0A1P8B8S4
uniprot id: A0A1P8B8S6
uniprot id: C0SVL7
uniprot id: Q8W2F2
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed consitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: May be due to intron retention.
messages: Nucleus

3702:AT1G73220
gene id: 3702:AT1G73220
uniprot id: A0A178WJR7
uniprot id: Q9CAT6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in embryo upon imbibition.
messages: Belongs to the major facilitator (TC 2.A.1) superfamily. Organic cation transporter (TC 2.A.1.19) family.
messages: Cell membrane
messages: Expressed in vascular tissues and at sites of lateral root formation. Mostly present in floral buds, flowers and immature siliques.
messages: High affinity carnitine transporter involved in the active cellular uptake of carnitine. Also transports organic cations. Regulates lateral root development.
messages: In flowers, expressed in anthers, sepals, petals and peduncles. Accumulates during germination in embryos, reaching a maximum during the radicle emergence. In seedlings, restricted to the vasculature, with highest levels in the collar and the root. Later present in both elongation and root hair zones in roots. Also present in root cap columella. Detected before and during lateral root initiation and emergence and thereafter remained in vascular tissues of each lateral root.
messages: Membrane
messages: Reduced sensitivity to carnitine and high degree of root branching.

3702:AT1G15030
gene id: 3702:AT1G15030
uniprot id: A0A384KSP4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G37055
gene id: 3702:AT5G37055
uniprot id: Q9FHW2
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ZNHIT1 family.
messages: Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling. Coodinates SWR1-C, FRI-C (FLC transcription activator complex), histone methyltransferase and general transcription factors. Represses flowering by positively regulating FLC and MAF4. Binds to the promoter region of FLC chromatin.
messages: Early flowering, leaf serration, production of extra petals and weak apical dominance.
messages: Expressed in root, lateral root primordia, shoot apex, leaves, stems, inflorescences, flowers, axillary buds, developing siliques and premature seeds.
messages: Homodimer. Component of the SWR1 chromatin-remodeling complex composed of at least ARP6/ESD1/SUF3, PIE1, SWC6, SWC2 and H2AZs (HTA8, HTA9, HTA11). Interacts directly with ARP6, PIE1 and SWC2. Interacts with FLX and SUF4, two component of the transcription activator complex FRI-C, and with ASHH2 and TAF14.
messages: Not regulated by circadian rhythm, photoperiod or vernalization.
messages: Nucleus
messages: Nucleus speckle

3702:AT3G24040
gene id: 3702:AT3G24040
uniprot id: A0A384LGT0
uniprot id: Q9LIQ3
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G31940
gene id: 3702:AT4G31940
uniprot id: A0A178V6C0
uniprot id: Q9SZ46
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By iron deficiency, mainly in roots.
messages: Can hydroxylate xanthotoxin (8-methoxypsoralen) to form 5-hydroxyxanthotoxin (5-hydroxy-8-methoxypsoralen) in vivo and in vitro (PubMed:18291319). Involved in the early iron deficiency response, possibly through an IDE1-like mediated pathway (PubMed:21315474). Involved in the pathway of sideretin biosynthesis from feruloyl CoA, a redox-active catecholic metabolite exuded by roots in response to iron deficiency in order to facilitate the uptake of iron; this pathway consists in the successive conversion from feruloyl CoA to scopoletin, from scopoletin to fraxetin and from fraxetin to sideretin (PubMed:29581584). Catalyzes the biosynthesis of sideretin via fraxetin hydroxylation (PubMed:29581584).
messages: Expressed in both primary and lateral roots under iron-deficient conditions, except in apical root zones, and mostly in the root epidermal layer.
messages: Increased root length at seedling stage (PubMed:21315474). Accumulation of fraxetin, but loss of sideretin root secretion in response to iron deficiency. Slightly increased iron-uptake ability at elevated pH leading to a better fitness of plants, due to the presence of high fraxetin content (PubMed:29581584).
messages: Membrane
messages: Plants overexpressing CYP82C4, can hydroxylate and subsequently glycosylate 8-methoxypsoralen.

3702:AT1G26380
gene id: 3702:AT1G26380
uniprot id: A0A654EEJ3
uniprot id: Q9FZC4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: Cell membrane
messages: Endoplasmic reticulum
messages: Flavin-dependent oxidoreductase involved in the biosynthetic pathway to 4-hydroxyindole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic metabolite required for inducible pathogen defense. Converts indole cyanohydrin into indole-3-carbonyl nitrile (ICN).
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: Three- to fivefold reduction in levels of ICN metabolites and accumulation of indole cyanogenic glycosides.
messages: Up-regulated by MKK4.
messages: cell wall

3702:AT1G04680
gene id: 3702:AT1G04680
uniprot id: A0A178W464
uniprot id: Q940Q1
names: Cofactor
names: Similarity
names: Tissue Specificity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.
messages: Expressed in flowers, but not in leaves.

3702:AT2G24390
gene id: 3702:AT2G24390
uniprot id: A0A178W3D8
uniprot id: A8MRP2
uniprot id: F4IPN3
uniprot id: F4IPN4
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the gamma-glutamylcyclotransferase family.
messages: Down-regulated by biological and chemical stimuli.
messages: Expressed mainly in leaves.
messages: Putative gamma-glutamylcyclotransferase.

3702:AT5G67190
gene id: 3702:AT5G67190
uniprot id: A0A5S9YJS7
uniprot id: Q9FH94
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT4G17718
gene id: 3702:AT4G17718
uniprot id: Q2V3H5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT3G60770
gene id: 3702:AT3G60770
uniprot id: A0A178VM26
uniprot id: P59223
names: Similarity
messages: Belongs to the universal ribosomal protein uS15 family.

3702:AT5G19020
gene id: 3702:AT5G19020
uniprot id: P0C8Q8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT1G66960
gene id: 3702:AT1G66960
uniprot id: A0A1P8AW29
uniprot id: Q9FZI2
names: Function
names: Similarity
messages: Belongs to the terpene cyclase/mutase family.
messages: Multifunctional enzyme that converts oxidosqualene to tirucalla-7,21-diene-3beta-ol and two other triterpene monoalcohols.

3702:AT3G42570
gene id: 3702:AT3G42570
uniprot id: F4JF10
names: Cofactor
names: Similarity
messages: Belongs to the peroxidase family.
messages: Binds 2 calcium ions per subunit.

3702:AT1G06100
gene id: 3702:AT1G06100
uniprot id: A0A178WKL3
uniprot id: Q9LND8
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The histidine box domains are involved in binding the catalytic metal ions.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.

3702:AT3G27830
gene id: 3702:AT3G27830
uniprot id: A0A178VJ19
uniprot id: P36210
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: chloroplast

3702:AT1G13870
gene id: 3702:AT1G13870
uniprot id: Q9LMH0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the KTI12 family.
messages: Cytoplasm
messages: Defective organ formation due to disorganized shoot, inflorescence, flower, and root meristems leading to stunted roots, few root hairs, lanceolate leaves, and a highly enlarged, disorganized shoot apex that does not produce an inflorescence (PubMed:12615938, PubMed:8392411, PubMed:10353913, PubMed:11589569, PubMed:15894610, PubMed:25518926). Altered cell division and cell differentiation in leaves (PubMed:25518926). No detectable 5-carbamoylmethyluridine (ncm5U) modified nucleosides (PubMed:20836892).
messages: Detected in globular-, heart-, and torpedo-stage embryos, in the outer integuments of ovules and in the funiculi. Also expressed in the peripheral zone of the shoot apical meristem (SAM) corresponding to the central zone. In elongating tissues, restricted at the periphery of the vascular bundle. In shoot and inflorescence apices, mostly present in the L2 layer, and, at lower levels, in the L1 layer, but absent of the L3 layer. In young leaf primordia, localized in the basal part of the dorsal side. In older leaf primordia, detected in vascular bundles and in the mesophyll between the vascular bundles. In expanding leaves, confined to stomatal guard cells, and individual palisade and spongy mesophyll parenchyma cells. In general, present around the vascular bundles. Expressed in young flower organs but not in mature sepals and petals. Gradient accumulation in the stamens and carpels, with the highest activity at the tip of the organs. Present in the meristematic and elongation zones of the primary root and in the vascular bundle of the differentiation zone.
messages: Elongator complex-associated factor that is not a structural subunit but rather transiently contacts the complex (PubMed:25518926). Regulates both meristem activity and organ growth; acts as a positive regulator of adaxial leaf patterning by modulating both cell division and differentiation (PubMed:12615938, PubMed:8392411, PubMed:11589569, PubMed:15894610, PubMed:25518926). Required for an early step in synthesis of 5-carbamoylmethyl (ncm5) groups present on uridines (ncm5U) at the wobble position in tRNA (PubMed:20836892).
messages: Expressed in roots, hypocotyls, cotyledons, shoot apices, stems, inflorescence apices, leaves and flowers.
messages: Interacts with the elongator complex (By similarity). Binds to calmodulin in a calcium-dependent manner (PubMed:12615938).
messages: Nucleus

3702:AT3G11630
gene id: 3702:AT3G11630
uniprot id: Q96291
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
messages: Down-regulated under highly reduced cellular thiol pool conditions. Down-regulated by ascorbate. Slightly induced by oxidative stress.
messages: Homodimer; disulfide-linked, upon oxidation (By similarity). Interacts with the plastidial thioredoxin CDSP32 (PubMed:12084836). Interacts with the plastidial NADPH-dependent thioredoxin reductase ANTR-C (PubMed:16884685).
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this typical 2-Cys peroxiredoxin, C(R) is provided by the other dimeric subunit to form an intersubunit disulfide. The disulfide is subsequently reduced by thioredoxin CDSP32.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. May be an antioxidant enzyme particularly in the developing shoot and photosynthesizing leaf.
messages: chloroplast

3702:AT4G04350
gene id: 3702:AT4G04350
uniprot id: Q9XEA0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Catalyzes the specific attachment of an amino acid to its cognate tRNA in a two step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA.
messages: Embryo defective. Developmental arrest of the embryo at the globular stage.
messages: Mitochondrion
messages: chloroplast

3702:AT4G25950
gene id: 3702:AT4G25950
uniprot id: A0A1P8B4Z3
uniprot id: Q9SZH0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase G subunit family.
messages: Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.
messages: Vacuole membrane

3702:AT3G02000
gene id: 3702:AT3G02000
uniprot id: A0A178VBU2
uniprot id: Q96305
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: Expressed first in the inflorescence apex, then in young floral primordia, and in the petal and stamen primordia (PubMed:15728668). Localized to the tapetum and middle layers (PubMed:20805327).
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity). Involved in flower development as a regulator of petal primorida initiation and further petal morphogenesis. May mediate post-translational modifications of target proteins required for normal petal organ initiation and morphogenesis. ROXY1/TGA protein interactions can occur in vivo and support their biological relevance in petal development. May be involved in the regulation of the floral regulator class C gene AG (AGAMOUS).
messages: Highly expressed in inflorescences, roots, and siliques. Expressed at lower levels in mature flowers.
messages: Interacts with TGA2, TGA3, TGA7 and PAN (PubMed:19218396). Interacts with TGA9 and TGA10 in the nucleus (PubMed:20805327).
messages: Nucleus
messages: Plants show a reduced number of petal primordia and abnormalities during further petal development. Defection in sporogenous cell formation in adaxial anther lobes when associated with the disruption of GRXC8/ROXY2 leading to fertility defects.

3702:AT5G21090
gene id: 3702:AT5G21090
uniprot id: Q9FPJ5
names: Function
names: Induction
names: Subunit
messages: Interacts with HIR1.
messages: Involved in plant defense response.
messages: Up-regulated by methyl jasmonate.

3702:AT2G36350
gene id: 3702:AT2G36350
uniprot id: Q9SJM3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Interacts with KCBP, PERK8, PERK9, PERK10 and PERK13.
messages: Serine/threonine-protein kinase that could be involved in the negative regulation of root growth.

3702:AT2G31670
gene id: 3702:AT2G31670
uniprot id: A0A178VYV2
uniprot id: Q9SIP1
names: Function
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Involved in stress response.
messages: Peroxisome
messages: Sequencing errors.

3702:AT1G69870
gene id: 3702:AT1G69870
uniprot id: A0A654ESS1
uniprot id: Q8RX77
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Circadian-regulation. Expression increase during the light phase and decrease during the dark phase.
messages: Expressed in leaves and flowers. Detected in stems and siliques. Highest expression in the distal lamina of older leaves. Restricted to the sieve element and companion cell complex of the minor vein.
messages: Interacts with NLA.
messages: Low-affinity proton-dependent nitrate transporter. Not involved in dipeptides transport, but has a weak glucosinolate transport activity. Involved in phloem loading and nitrate remobilization from the older leaves to other tissues.
messages: No visible phenotype when grown under normal conditions. Growth retardation when starved of nitrogen.
messages: Ubiquitinated by NLA. Ubiquitination of NPF2.13 leads to its degradation by the proteasome.

3702:AT5G01450
gene id: 3702:AT5G01450
uniprot id: Q6DBH0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Endomembrane system
messages: Exhibits E2-dependent E3 ligase activity (PubMed:22897245). Involved in pollen mitosis II (PMII) regulation during male gametogenesis (PubMed:22897245).
messages: Expressed in the shoot apical meristems (SAM), root tips, pollen and inflorescences.
messages: In young seedlings, expressed in the shoot apical meristem (SAM) and in root tips (PubMed:22897245). In inflorescence, specifically observed in mature pollen (PubMed:22897245). Present from the early bicellular pollen stage to the mature pollen stage; levels in vegetative cells increase during the development of pollen (PubMed:22897245). Detected in the germinating pollen tubes (PubMed:22897245).
messages: Interacts with At1g78040, At1g10650, VHA-c4/AVAP4, VHA-c''2/VMA16 and TUFA.
messages: No obvious defects during the vegetative developmental stage (PubMed:22897245). The double mutant lacking both APD1 and APD2 exhibits an increased percentage of bicellular-like pollen at the mature pollen stage (PubMed:22897245). Plants lacking APD1, APD2, APD3 and APD4 are defective for cell division in male gametogenesis resulting in severe abnormal bicellular-like pollen phenotypes (PubMed:22897245).

3702:AT1G31470
gene id: 3702:AT1G31470
uniprot id: F4I9E1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Failure of fusion of the polar nuclei during megagametogenesis.
messages: Membrane
messages: Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed:16698901).

3702:AT5G48360
gene id: 3702:AT5G48360
uniprot id: A0A5S9YCE2
uniprot id: Q8GX37
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the formin-like family. Class-I subfamily.
messages: Membrane
messages: Might be involved in the organization and polarity of the actin cytoskeleton.

3702:AT1G76560
gene id: 3702:AT1G76560
uniprot id: Q9C9K2
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues.
messages: Belongs to the CP12 family.
messages: Binds copper and nickel ions. Copper ions catalyze the oxidation of reduced thiol groups and thus promote formation of the disulfide bonds required for linker activity (By similarity).
messages: Contains two disulfide bonds; only the oxidized protein, with two disulfide bonds, is active in complex formation. The C-terminal disulfide is involved in the interaction with GAPDH and the N-terminal disulfide mediates the binding of PRK with this binary complex.
messages: In flowers, restricted to the stigma and anthers.
messages: Insensitive to light/darkness. Slightly repressed by heat. Induced by anaerobic treatment.
messages: Monomer (By similarity). Component of a complex that contains two dimers of PRK, two tetramers of GAPDH and CP12. CP12 associates with GAPDH, causing its conformation to change. This GAPDH/CP12 complex binds PRK to form a half-complex (one unit). This unit probably dimerizes due partially to interactions between the enzymes of each unit.
messages: Mostly expressed, at low levels, in stems and, to a lesser extent, in leaves and roots.
messages: chloroplast

3702:AT4G18350
gene id: 3702:AT4G18350
uniprot id: O49505
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the carotenoid oxygenase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.
messages: Low induction by drought stress.
messages: Very low in all tissues. Expressed at the point of organ attachment and the abscission zones in the plant.
messages: chloroplast stroma

3702:AT5G24170
gene id: 3702:AT5G24170
uniprot id: A0A1P8BEJ3
uniprot id: A0A654G3M1
uniprot id: Q6GKX4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFT2 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.
messages: Membrane

3702:AT3G13950
gene id: 3702:AT3G13950
uniprot id: B9DG91
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G52980
gene id: 3702:AT1G52980
uniprot id: Q9C923
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
messages: GTPase involved in pre-60S ribosomal subunit maturation.
messages: In contrast to other GTP-binding proteins, this family is characterized by a circular permutation of the GTPase motifs described by a G4-G1-G3 pattern.
messages: Interacts with the 60S ribosomal proteins RPL10AA, RPL10AB and RPL10AC.
messages: Nucleus
messages: The DARXP motif is also sometime designated as G6 region.
messages: The GTPase activity is stimulated in the presence of the 60S ribosomal subunit.
messages: Ubiquitous, with higher levels in meristematic regions.
messages: nucleolus

3702:AT2G17470
gene id: 3702:AT2G17470
uniprot id: A0A1P8B2G1
uniprot id: A0A654ETM2
uniprot id: Q9SHM1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Malate transporter.
messages: Membrane

3702:AT5G28750
gene id: 3702:AT5G28750
uniprot id: A0A178USC3
uniprot id: Q9LKU2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatA/E family.
messages: In thylakoid membranes, TATC and TATB form a large receptor complex, containing about eight TATC-TATB pairs, which binds the precursor protein. Twin arginine signal peptide promotes pH-triggered docking of TATA oligomers to TATC-TATB receptor complex, inducing a conformational switch of TATA that results in activation of the translocase. TATA dissociates from TATC-TATB upon completion of translocation.
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation (By similarity).
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.
messages: chloroplast thylakoid membrane

3702:AT1G36000
gene id: 3702:AT1G36000
uniprot id: A0A654EFH5
uniprot id: Q9C8V8
names: Similarity
messages: Belongs to the LOB domain-containing protein family.

3702:AT3G46940
gene id: 3702:AT3G46940
uniprot id: A0A1I9LM85
uniprot id: Q9STG6
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the dUTPase family.
messages: Binds 1 Mg(2+) per trimer.
messages: Homotrimer.
messages: Involved in nucleotide metabolism via production of dUMP, the immediate precursor of thymidine nucleotides, and decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
messages: Silencing of DUT leads to high seedling mortality and affects plant growth and flower organ morphology in surviving plants.
messages: This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP, preventing uracil incorporation into DNA.

3702:AT2G01918
gene id: 3702:AT2G01918
uniprot id: A0A178VRJ5
uniprot id: Q2V4B2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbQ family.
messages: Impaired chloroplastic NAD(P)H dehydrogenase (NDH) activity, probably due to a reduced stability of the NDH complex.
messages: Required for both formation and activity of the chloroplast NAD(P)H dehydrogenase (NDH) complex.
messages: Subunit of the lumenal protuberance of the NDH complex.
messages: chloroplast thylakoid membrane

3702:AT5G17490
gene id: 3702:AT5G17490
uniprot id: Q9LF53
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRAS family. DELLA subfamily.
messages: Expressed at very low level. Mainly expressed in germinating seeds and flowers and siliques. Not expressed in other tissues.
messages: Interacts directly with the GID2/SLY1 component of the SCF(GID2) complex, suggesting that it may be ubiquitinated. Interacts (via N-terminus) with GID1A, GID1B and GID1B (via N-terminus). Interacts with the BOI proteins BOI, BRG1, BRG2 and BRG3.
messages: May be ubiquitinated.
messages: Nucleus
messages: Phosphorylated.
messages: Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Its activity may be regulated by phytohormones such as auxin and ethylene (By similarity).
messages: Rga, gai, rgl1, rgl2 and rgl3 pentuple mutant displays constitutive GA responses even in the absence of GA treatment.

3702:AT1G18440
gene id: 3702:AT1G18440
uniprot id: A0A1P8APF1
uniprot id: Q8GW64
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PTH family.
messages: Monomer.
messages: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.
messages: chloroplast stroma

3702:AT2G30040
gene id: 3702:AT2G30040
uniprot id: O64741
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT2G31660
gene id: 3702:AT2G31660
uniprot id: F4IRR2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the importin beta family.
messages: Cytoplasm
messages: Early flowering and increased sensitivity to inhibition of seed germination and plant growth by exogenous ABA.
messages: Expressed in roots, epidermal and guard cells of leaves, stems and siliques.
messages: Functions probably in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with other importin subunits (Probable). Involved in the regulation of the abscisic acid (ABA)-mediated pathway in response to cold or salt stress (PubMed:16889648). Involved in UV-B responses by regulating accumulation of UV-absorbing pigments through mediation of MYB4 nuclear transport (PubMed:17993626). Involved in trichome initiation by controlling GL1, GL2, GL3 and TTG1 transcription and may affect an upstream regulator of GL3 and disrupt complex function (PubMed:18713401, PubMed:19234066). Acts as negative regulator miRNA activity by regulating miRNA loading into AGO1 complexes (PubMed:21984696).
messages: Interacts with MYB4.
messages: Nucleus

3702:AT1G78860
gene id: 3702:AT1G78860
uniprot id: Q9ZVA5
names: Subcellular Location Annotation
messages: Secreted
messages: cell wall

3702:AT3G24350
gene id: 3702:AT3G24350
uniprot id: A0A178VCU6
uniprot id: F4J6K6
uniprot id: Q9LK09
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the syntaxin family.
messages: Part of the t-SNARE complex.
messages: Vesicle trafficking protein that functions in the secretory pathway.
messages: cis-Golgi network membrane

3702:AT5G41620
gene id: 3702:AT5G41620
uniprot id: Q66GQ2
names: Sequence Caution
messages: Contaminating sequence.

3702:AT1G52260
gene id: 3702:AT1G52260
uniprot id: A3KPF5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.
messages: Belongs to the protein disulfide isomerase family.
messages: Endoplasmic reticulum lumen
messages: Widely expressed.

3702:AT1G71140
gene id: 3702:AT1G71140
uniprot id: Q9C994
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT1G66630
gene id: 3702:AT1G66630
uniprot id: Q9C6H2
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT5G01110
gene id: 3702:AT5G01110
uniprot id: Q9LFC5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G28210
gene id: 3702:AT3G28210
uniprot id: A0A178VHW6
uniprot id: Q67YE6
names: Function
messages: May be involved in environmental stress response.

3702:AT1G04110
gene id: 3702:AT1G04110
uniprot id: A0A178WPN6
uniprot id: O64495
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S8 family.
messages: Cell membrane
messages: Increased stomatal density and formation of clustered stomata by enhanced stomatal development initiation and extension of stomatal cell lineages. No major impact on photosynthesis, except 30% higher CO2 assimilation rates in low-light-adapted plants exposed to high light intensities.
messages: Mostly expressed in leaves and cotyledons (especially in epidermal cells), and, to a lower extent, in floral buds, stems, and siliques. Strongly expressed in stomatal precursor cells (meristemoids and guard mother cells).
messages: Negatively feedback controlled by components of an SDD1-dependent signaling pathway. Repressed by GTL1.
messages: Serine protease involved in the negative regulation of stomatal density and distribution. Not active on EPFL6 (AC Q1PEY6) (PubMed:20056678). Positive regulator of water use efficiency (WUE).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast

3702:AT2G42910
gene id: 3702:AT2G42910
uniprot id: A0A5S9X6J7
uniprot id: Q680A5
names: Similarity
messages: Belongs to the ribose-phosphate pyrophosphokinase family.

3702:AT1G51460
gene id: 3702:AT1G51460
uniprot id: A0A654EMJ7
uniprot id: Q9C8J8
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: By NaCl.
messages: Membrane

3702:AT3G21200
gene id: 3702:AT3G21200
uniprot id: Q9LU39
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with HEMA1 (PubMed:22180625, PubMed:24753615) and forms a heterotetramer of two GLUTRBP and two HEMA1 subunits (PubMed:24753615).
messages: Involved in the regulation of glutamyl-tRNA reductase (GluTR) which is important for the synthesis and distribution of 5-aminolevulinate, a precursor in heme and chlorophyll biosynthesis (PubMed:22180625). Stimulates GluTR activity and regulates glutamate-1-semialdehyde release. May play a role in heme metabolism (PubMed:24753615). Necessary for efficient photosynthetic electron transport in chloroplasts (PubMed:20657737).
messages: Reduced growth, slightly pale green leaves, reduced levels of chlorophyll and heme, and low non-photochemical quenching (NPQ).
messages: chloroplast stroma

3702:AT1G31780
gene id: 3702:AT1G31780
uniprot id: Q6NMI3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the COG6 family.
messages: Component of the conserved oligomeric Golgi complex which is composed of eight different subunits and is required for normal Golgi morphology and localization (Probable). Interacts with COG5, COG7 and COG8 (PubMed:27448097).
messages: Golgi apparatus membrane
messages: Required for normal Golgi function.

3702:AT4G14301
gene id: 3702:AT4G14301
uniprot id: A0A178V0C4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G06030
gene id: 3702:AT1G06030
uniprot id: A0A654E8G1
uniprot id: Q9LNE3
names: Function
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.
messages: May play an important role in maintaining the flux of carbon towards starch formation.

3702:AT1G22870
gene id: 3702:AT1G22870
uniprot id: F4I313
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although it belongs to the kinase superfamily, lacks the residues involved in ATP binding, suggesting that it has no protein kinase activity.
messages: Belongs to the protein kinase superfamily.
messages: Expressed in roots, seedlings, leaves, stems, flowers, and, at low levels, in siliques.
messages: Golgi apparatus membrane
messages: Mainly expressed in leaf mesophyll cells, and, at low levels, in root vascular tissues.
messages: Prevacuolar compartment membrane
messages: Probably inactive kinase (PubMed:28751315). Component of the AP2-containing clathrin coat that regulates clathrin-dependent trafficking at plasma membrane, TGN and endosomal system (PubMed:28751315). Together with SCYL2B, required for cell growth, plant growth and development (PubMed:28751315).
messages: The double mutant scyl2a scyl2b has short root hairs and small shoots.
messages: The protein kinase domain is predicted to be catalytically inactive.
messages: trans-Golgi network membrane

3702:AT4G25434
gene id: 3702:AT4G25434
uniprot id: A0A1P8B8M4
uniprot id: A0A1P8B8M5
uniprot id: A0A1P8B8M8
uniprot id: A0A1P8B8M9
uniprot id: A0A1P8B8N1
uniprot id: A0A1P8B8N4
uniprot id: A0A1P8B8N5
uniprot id: A0A1P8B8N6
uniprot id: A0A1P8B8N9
uniprot id: A0A1P8B8P8
uniprot id: A0A654FSR4
uniprot id: Q6NPD7
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, stems and, at lower level, leaves.
messages: May mediate the hydrolysis of some nucleoside diphosphate derivatives. In vitro, uses both ADP-ribose and NADH as substrates; however the relevance of such substrates in vivo is unclear.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives, possibly using both NADH and ADP-ribose as substrates.

3702:AT1G09620
gene id: 3702:AT1G09620
uniprot id: F4I116
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Catalyzes the specific attachment of an amino acid to its cognate tRNA in a two step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA.
messages: cytosol

3702:AT3G61530
gene id: 3702:AT3G61530
uniprot id: A0A654FJS9
uniprot id: Q9M315
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PanB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.
messages: Mitochondrion

3702:AT1G76050
gene id: 3702:AT1G76050
uniprot id: Q3ECD0
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pseudouridine synthase RluA family.
messages: May be due to a competing donor splice site.
messages: Sequencing errors.
messages: chloroplast

3702:AT3G26280
gene id: 3702:AT3G26280
uniprot id: A0A1I9LMQ2
uniprot id: O65786
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT5G66080
gene id: 3702:AT5G66080
uniprot id: A0A5S9YHG5
uniprot id: Q9FKX4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: May dephosphorylate and repress plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), thus influencing negatively plant growth and fitness.
messages: Plants missing PP2C42/PP2C-D2, PP2C64/PP2C-D5, PP2C79/PP2C-D7, PP2C63/PP2C-D8 and PP2C68/PP2C-D9 exhibit an increased hypocotyl length, as well as an enhanced sensitivity to LiCl and media acidification.

3702:AT3G25790
gene id: 3702:AT3G25790
uniprot id: A0A1I9LLU5
uniprot id: Q9LS00
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Induced by nitrate (PubMed:25723764). Down-regulated under nitrate deprivation conditions (PubMed:27419465).
messages: Nucleus
messages: Probable factor involved in nitrate and phosphate signaling in roots. Integrates nitrate and phosphate starvation responses and adaptation of root architecture, depending on nutrient availabilities. Acts downstream of the nitrate sensor and transporter NPF6.3/NRT1.1. Represses primary root development in response to phosphate deficiency conditions, only when nitrate is present.

3702:AT4G11370
gene id: 3702:AT4G11370
uniprot id: Q9SUS4
names: Function
names: Tissue Specificity
messages: Predominantly expressed in stems.
messages: Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro.

3702:AT5G36230
gene id: 3702:AT5G36230
uniprot id: A0A178UGW1
uniprot id: A0A1P8BB34
uniprot id: Q93ZC2
names: Similarity
messages: Belongs to the BZW family.

3702:AT5G08335
gene id: 3702:AT5G08335
uniprot id: A0A178UID5
uniprot id: Q93W54
names: Activity Regulation
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family.
messages: Catalyzes the post-translational methylation of isoprenylated C-terminal cysteine residues, resulting in the modulation of the function of prenylated proteins. Involved in negative regulation of abscisic acid signaling. Carboxyl methylation is a reversible and potentially regulated step in the post-translational modification of prenylated proteins.
messages: Divalent metal cations. Probably Zn(2+).
messages: Endoplasmic reticulum membrane
messages: Expressed in flowers, stems, leaves, roots and siliques. Detected in apices and vascular tissues of leaves and roots, in the stigma and in the filaments and anthers of stamen. Not found in petioles or hypocotyls.
messages: ICMTB is more widely expressed and has a higher catalytic activity than ICMTA.
messages: Inhibited by farnesylthioacetic acid (FTAA) and N-acetyl-S-trans, trans-farnesyl-l-cysteine (AFC).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Not induced by abscisic acid or auxin.
messages: Plants lacking ICMTA and ICMTB have altered phyllotaxis, fasciated stems and development of axillary flowers.

3702:AT1G14500
gene id: 3702:AT1G14500
uniprot id: A0A178WB98
uniprot id: Q9M9R3
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G34123
gene id: 3702:AT2G34123
uniprot id: Q2V433
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Could be the product of a pseudogene. Lacks 2 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT3G15300
gene id: 3702:AT3G15300
uniprot id: A0A178VH72
uniprot id: Q9LDZ1
names: Function
names: PTM
names: Subcellular Location Annotation
messages: May modulate WRKY transcription factor activities.
messages: Nucleus
messages: Phosphorylated on serine and threonine residues by MPK6.

3702:AT4G15630
gene id: 3702:AT4G15630
uniprot id: A0A178UYN3
uniprot id: Q8L8Z1
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G01830
gene id: 3702:AT3G01830
uniprot id: Q9SGI8
names: Caution
names: Function
names: Induction
messages: Although assigned as a calmodulin family member by Ref.5, it only contains EF-hand domains.
messages: By touch and during darkness conditions.
messages: Potential calcium sensor.

3702:AT3G09400
gene id: 3702:AT3G09400
uniprot id: Q9SR24
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: No visible phenotype.
messages: Nucleus
messages: The conserved PP2C phosphatase domain (240-639) is interrupted by an insertion of approximately 100 amino acids.

3702:AT4G22770
gene id: 3702:AT4G22770
uniprot id: A0A5S9XUX6
uniprot id: O49658
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT4G00895
gene id: 3702:AT4G00895
uniprot id: Q8W481
names: Similarity
names: Subunit
messages: Belongs to the ATPase delta chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.

3702:AT4G33010
gene id: 3702:AT4G33010
uniprot id: A0A178UTF1
uniprot id: B3H5Y8
uniprot id: Q94B78
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GcvP family.
messages: Expressed in leaves. Detected in roots, stems, flowers and siliques.
messages: Glutathionylated at Cys-98, Cys-777, Cys-943 and Cys-1022 after S-nitrosoglutathione treatment.
messages: Homodimer (By similarity). The glycine cleavage system is composed of four proteins: P, T, L and H.
messages: Inhibited by harpin, S-nitrosoglutathione (GSNO), nitric oxide, N-ethylmaleimide and 5,5'-dithiobis-(2-nitrobenzoic acid).
messages: Mitochondrion
messages: No visible phenotype; due to the redundancy with GLDP2. Gldp1 and gldp2 double mutants have a seedling development arrested at the cotyledon stage even under nonphotorespiratory conditions.
messages: S-nitrosylated at unknown positions by nitric oxide.
messages: The glycine cleavage system catalyzes the degradation of glycine.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.
messages: The glycine decarboxylase (GDC) or glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (By similarity).
messages: This protein has also been shown to act as an inducible nitric oxide synthase (iNOS) (PubMed:12757708), but the paper has been retracted (PubMed:15599984).

3702:AT2G44900
gene id: 3702:AT2G44900
uniprot id: O22161
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the beta-catenin family.
messages: Expressed ubiquitously, with higher levels in root tip, pericycle and vasculature.
messages: Interacts with SNL1 (PubMed:19962994). Interacts with MYB53, MYB92 and MYB93 (PubMed:24902892).
messages: Nucleus
messages: Present in lateral root primordia.
messages: Promotes lateral root initiation and development, independently of auxin (IAA) and abscisis acid (ABA).

3702:AT2G18230
gene id: 3702:AT2G18230
uniprot id: A0A178VY12
uniprot id: P21216
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPase family.
messages: Cytoplasm

3702:AT5G55810
gene id: 3702:AT5G55810
uniprot id: F4K687
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic NMN adenylyltransferase family.
messages: Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate.
messages: Nucleus

3702:AT3G63130
gene id: 3702:AT3G63130
uniprot id: Q9LE82
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA1 family.
messages: Cytoplasm
messages: GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state. Plays a role in spatial signaling during cell division.
messages: Homodimer (By similarity). Interacts with WIP1 through its WPP domain. Component of Ran complexes at least composed of WIT1 or WIT2, RANGAP1 or RANGAP2, and WIP1 or WIP2 or WIP3. Interacts directly with WIT1, WIP2 and WIP3. Interacts with POK1.
messages: Nucleus envelope
messages: Nucleus membrane
messages: The WPP domain is required for the nuclear envelope localization.
messages: phragmoplast
messages: spindle

3702:AT1G21600
gene id: 3702:AT1G21600
uniprot id: Q9XI19
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Essential protein involved in plastid gene expression and in chloroplast biogenesis (PubMed:16326926, PubMed:31128276, PubMed:33001465, PubMed:35328480). Links photomorphogenesis and chloroplast biogenesis through its dual localization; required for the formation of late photobodies in the nucleus, as well as for phytochrome B-mediated signaling cascade and subsequent reshaping of the plastid-encoded RNA polymerase (PEP) activity (PubMed:33001465). Binds RNA via specific recognition motifs of viral origin (PubMed:35328480). Recruited by MTERF5 to the transcriptionally paused region of psbEFLJ (PubMed:31128276). Promotes leaf greening (PubMed:24272250).
messages: Induced by cytokinin (e.g. trans-zeatin) (PubMed:33322466). Probably regulated by HY5 in response to light (PubMed:33001465).
messages: Lethal without exogenous carbon sources (PubMed:16326926). Reduced expression of plastid-encoded genes with plastid-encoded multimeric promoters (PEP) (PubMed:16326926, PubMed:31128276). Strongly reduced presence of both plastid- and nuclear-encoded soluble polypeptides and polypeptides associated with the thylakoid membrane in chloroplasts (PubMed:16326926). Albino plants unable to produce primary leaves white cotyledons that fails to accumulate chlorophyll (Chl) even in low light, thus leading to high nonphotochemical quenching (NPQ) (PubMed:16326926, PubMed:24272250, PubMed:33001465, PubMed:35328480). This albino phenotype is associated with an altered phytochrome-mediated signaling, a disrupted degradation of chloroplast development repressors PIF1 and PIF3, destablized HY5 and impaired expression of the photomorphogenesis regulator GLK1 (PubMed:33001465). Abnormal chloroplasts which fail to contain grana thylakoids that are replaced by oval-shaped vesicles surrounded by plastoglobuli (PubMed:16326926). Starch accumulates only in old leaves (PubMed:16326926).
messages: Mostly expressed in rosette leaves, stems and flowers, and, to a lower extent, in roots and cauline leaves.
messages: Nucleus
messages: Subunit of the plastid-encoded RNA polymerase (PEP) complex (PubMed:16326926, PubMed:31128276, PubMed:35328480). Component of a large nuclear subcomplex that may include other PEP subunits (e.g. PTAC12/HMR/PAP5, PTAC14/PAP7 and PTAC7/PAP12) (PubMed:35328480). Binds directly to PTAC12/HMR/PAP5 in the nucleus (PubMed:33001465). Interacts with MTERF5 (PubMed:31128276).
messages: chloroplast
messages: chloroplast thylakoid
messages: nucleoplasm

3702:AT5G44260
gene id: 3702:AT5G44260
uniprot id: Q9FKW2
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with MARD1/FLZ9 and RD21A via its CCCH zing finger domains.
messages: P-body
messages: Stress granule

3702:AT5G18810
gene id: 3702:AT5G18810
uniprot id: A0A178UBM0
uniprot id: Q1PDV2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family. SCL subfamily.
messages: Component of the spliceosome. Interacts with RS2Z33, CYP59, CYP63 and CYP95.
messages: Involved in intron recognition and spliceosome assembly (Probable). Probably active at the 5' splice sites.
messages: Nucleus speckle
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G57020
gene id: 3702:AT5G57020
uniprot id: A0A178UUQ9
uniprot id: Q9LTR9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins.
messages: Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins. Can also use decanoyl-CoA and lauroyl-CoA as substrates.
messages: Belongs to the NMT family.
messages: Cytoplasm
messages: Expressed ubiquitously, with higher levels in young tissues (at protein level).

3702:AT1G68825
gene id: 3702:AT1G68825
uniprot id: Q6X5T8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Mostly expressed in roots and flowers, and, to a lower extent, in leaves and stems.
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, including leaves shape, pedicule elongation, inflorescence organization and fruit maturation, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT1G54100
gene id: 3702:AT1G54100
uniprot id: A0A178W3F2
uniprot id: Q9SYG7
names: Induction
names: Similarity
names: Subunit
messages: Belongs to the aldehyde dehydrogenase family.
messages: By abscisic acid (ABA) and dehydration in roots and plantlets, and by salt stress in plantlets.
messages: Homotetramer.

3702:AT5G52520
gene id: 3702:AT5G52520
uniprot id: Q9FYR6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
messages: Lethal. In heterozygous plants, aborted ovules.
messages: Mitochondrion
messages: chloroplast

3702:AT2G35110
gene id: 3702:AT2G35110
uniprot id: A0A178W190
uniprot id: Q5S2C4
names: Caution
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the HEM-1/HEM-2 family.
messages: Binds PIR.
messages: Expressed in roots, root hairs, hypocotyls, cotyledons, stems, leaves, trichomes, and flowers.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G52370
gene id: 3702:AT1G52370
uniprot id: Q56W16
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA.

3702:AT1G02690
gene id: 3702:AT1G02690
uniprot id: A0A654E7G9
uniprot id: F4HXL3
uniprot id: Q9FWY7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the importin alpha family.
messages: Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (By similarity). Acts as cellular receptor for the nuclear import of the virD2 protein of Agrobacterium, but is not essential for Agrobacterium-mediated root transformation (PubMed:18836040).
messages: Binds to conventional NLS motifs.
messages: Forms a complex with importin subunit beta-1.
messages: Nucleus envelope

3702:AT2G33540
gene id: 3702:AT2G33540
uniprot id: A0A1P8B2G0
uniprot id: Q8LL04
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Binds Mg(2+), Co(2+) or Mn(2+).
messages: By NaCl.
messages: Completely dephosphorylates 'Ser-2', and partially 'Ser-5' and 'Ser-7' of the heptad repeats YSPTSPS in the C-terminal domain (CTD) of the largest RNA polymerase II subunit (RPB1) (PubMed:25464831). Involved in defense response (PubMed:25464831). Acts as negative regulator of immune gene expression and immunity to pathogen infections (PubMed:25464831). Preferentially dephosphorylates 'Ser-2' of RNA polymerase II CTD (PubMed:25464831). This counterregulates the MAP kinase (MAPK) or cyclin-dependent kinase C (CDKC)-mediated phosphorylation of CTD in response to pathogens and upon perception of microbe-associated molecular patterns (MAMPs) (PubMed:25464831). MAPKs phosphorylate and activate CDKCs, which are CTD kinases that positively regulate plant innate immunity (PubMed:25464831). Acts as negative regulator of stress gene transcription involved in abscisic acid (ABA) mediated signaling pathway and cold resistance (PubMed:12149434, PubMed:16905668). Acts as post-transcriptional gene silencing (PTGS) suppressor (PubMed:31076735).
messages: Grows more slowly and flower earlier than wild-type plants. ABA hyperactivation of stress-inducible genes.
messages: Interacts with RAP74.
messages: Nucleus
messages: The BRCT domain is required for interaction with RAP74.
messages: This promotes the activity of RNA polymerase II.

3702:AT3G08950
gene id: 3702:AT3G08950
uniprot id: A0A178VMU8
uniprot id: Q8VYP0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SCO1/2 family.
messages: Embryos arrested at various developmental stages, mostly at the heart or torpedo stage.
messages: Expressed in the whole plant with highest expression in imbibed seeds, embryos, endosperm, and root tips.
messages: Mitochondrion inner membrane
messages: Thought to play a role in cellular copper homeostasis, mitochondrial redox signaling or insertion of copper into the active site of COX. Plays an essential role in embryo development.

3702:AT2G42300
gene id: 3702:AT2G42300
uniprot id: A0A1P8B161
uniprot id: A0A1P8B162
uniprot id: A0A654F164
uniprot id: A0NAB1
uniprot id: Q8VZ02
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in leaves, stems, and flowers.
messages: Homodimer.
messages: No experimental confirmation available.
messages: Nucleus

3702:AT2G17340
gene id: 3702:AT2G17340
uniprot id: Q949P3
names: Activity Regulation
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Activity is strongly promoted by Co(2+), Ni(2+), Mg(2+), Cu(2+) and Mn(2+) (PubMed:27322068). Activity is inhibited by EDTA (PubMed:27322068).
messages: Belongs to the damage-control phosphatase family. Phosphopantetheine phosphatase II subfamily.
messages: Metal-dependent phosphatase with probable damage-control functions (PubMed:27322068). Shows phosphatase activity against several substrates, including sugar phosphates and p-nitrophenyl phosphate(pNPP) (PubMed:27322068). Prefers sugar phosphate substrates, including the extremely potent glycating agents ribose-5-phosphate and erythrose-4-phosphate (PubMed:27322068).
messages: Multimer.
messages: Phosphatase activity is strongly promoted by several divalent cations but it is suggested that Mn(2+) and possibly Ni(2+) represent biologically relevant metal ion cofactors for damage-control phosphatases.
messages: Subfamily II proteins have an EGMGR motif about 50 residues from the C-terminus (Probable). This motif lies near the metal-binding residues in the putative substrate-binding cleft 2 (Probable). Subfamily II proteins occur only in eukaryotes, in two forms: as a stand-alone unit in plants, and as a C-terminal domain of pantothenate kinases in plants, animals, and chytrid fungi (Probable).

3702:AT4G17230
gene id: 3702:AT4G17230
uniprot id: A0A1P8B5A9
uniprot id: Q9M0M5
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: By osmotic and cold stresses, and UV-A/B.
messages: Cytoplasm
messages: During development, higher expression levels are detected in young rosette leaves, senescing leaves and petals and sepals at flower stage 15.
messages: Expressed in roots, hypocotyls, cotyledons, shoot apex, leaves, flowers and siliques.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way.

3702:AT1G18300
gene id: 3702:AT1G18300
uniprot id: A0A178WG84
uniprot id: Q9LE73
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, stems and leaves.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. In vitro, it can use both NADH and ADP-ribose as substrates; however the relevance of such substrates in vivo is unclear.

3702:AT5G10010
gene id: 3702:AT5G10010
uniprot id: A2RVJ8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Embryo lethal in homozygous plants. Hypersensitivity to heat leading to the inability to withstand prolonged heat stress (4 days at 37 degrees Celsius), probably due to impaired heat-induced chromocentre decondensation associated with attenuated heat reactivation of various transcriptional gene silencing (TGS) loci.
messages: Essential protein required for basal thermotolerance, especially during heat-induced chromocentre decondensation, thus regulating transcriptional gene silencing (TGS).
messages: Expressed predominately at the early stages during embryogenesis.
messages: Nucleus
messages: nucleolus

3702:AT2G16210
gene id: 3702:AT2G16210
uniprot id: Q5BPT7
names: Miscellaneous
names: Subcellular Location Annotation
messages: May be due to an intron retention.
messages: Nucleus

3702:AT5G45670
gene id: 3702:AT5G45670
uniprot id: A0A178UDP5
uniprot id: Q9FK75
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G08360
gene id: 3702:AT5G08360
uniprot id: A0A178UGX3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G24720
gene id: 3702:AT2G24720
uniprot id: Q9SHV1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane

3702:AT4G13940
gene id: 3702:AT4G13940
uniprot id: A0A178UZR5
uniprot id: A8MQP1
uniprot id: F4JTV4
uniprot id: F4JTV5
uniprot id: O23255
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the adenosylhomocysteinase family.
messages: Binds 1 NAD(+) per subunit.
messages: Embryo defective arrested at the globular stage (PubMed:15266054). Null mutations are homozygous lethal (PubMed:15266054).
messages: Essential protein during embryogenesis (PubMed:15266054). Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (PubMed:15659630). Required for DNA methylation-dependent gene silencing (PubMed:15659630).
messages: Homotetramer.

3702:AT4G08330
gene id: 3702:AT4G08330
uniprot id: Q9STN5
names: Subcellular Location Annotation
messages: chloroplast

3702:AT4G19006
gene id: 3702:AT4G19006
uniprot id: Q8GYA6
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the proteasome subunit S11 family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Ubiquitous with highest expression in flowers.

3702:AT5G42740
gene id: 3702:AT5G42740
uniprot id: A0A178UPP5
uniprot id: A0A1P8BG38
uniprot id: P34795
names: Activity Regulation
names: Polymorphism
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GPI family.
messages: Cytoplasm
messages: Homodimer.
messages: Inhibited by glycerol-3-P (G3P).
messages: Was sequenced in many cultivars; Ag-0, Bl-1, Bus-1, Ci-0, Cvi-0, Dra-0, Edi-0, Hau-0, Hiroshima, In-0, Ita-0, Kas-1, Mr-0, Nok-4, Ost-0, Pog-0, Rou-0, Su-0, Ts-1 and Ws-0.

3702:AT2G15390
gene id: 3702:AT2G15390
uniprot id: Q9SJP2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 37 family.
messages: Expressed in roots, stems, leaves, flowers, siliques and seedlings.
messages: Golgi stack membrane
messages: May be due to an intron retention.
messages: May be involved in cell wall biosynthesis. May act as a fucosyltransferase.

3702:AT1G79500
gene id: 3702:AT1G79500
uniprot id: A0A178W4C4
uniprot id: Q9AV97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the KdsA family.
messages: Catalyzes the stereospecific condensation of D-arabinose 5-phosphate and phosphoenolpyruvate to form 3-deoxy-D-manno-octulosonate 8-phosphate (KDO-8-phosphate) and inorganic phosphate. Involved in the biosynthesis of 3-deoxy-D-manno-octulosonate (KDO) which is an indispensable component of rhamnogalacturonan II (RG-II), a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues and pollen tube growth and elongation.
messages: Cytoplasm
messages: Expressed in shoots.

3702:AT2G19380
gene id: 3702:AT2G19380
uniprot id: O64571
names: Function
names: Subcellular Location Annotation
messages: May regulate the turnover of mRNAs in the nucleus.
messages: Nucleus

3702:AT3G04870
gene id: 3702:AT3G04870
uniprot id: Q38893
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Albino seedling due to defect in pigmentation, growth arrest shortly after germination, altered leaf development, and seedling lethality.
messages: Belongs to the zeta carotene desaturase family.
messages: Highly expressed in leaves. Expressed at low levels in flowers and siliques.
messages: Lipophilic quinones such as decyl-plastoquinone or decyl-ubiquinone.
messages: Plays a crucial role in plant growth and development. Is essential for the biosynthesis of carotenoids. Carotenoids are involved in different physiological processes, including coloration, photoprotection, biosynthesis of abscisic acid (ABA) and chloroplast biogenesis (PubMed:17468780, PubMed:24907342). Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. Shows stereoselectivity toward trans C15-C15'zeta-carotene double bond. The zeta-carotene produced by the phytoene desaturase PDS has a C15-C15' double bond in the cis configuration and it requires isomerization before being recognized as substrate by ZDS. The main product is 7,9,7',9'-tetra-cis-lycopene (pro-lycopene) (PubMed:9914519).
messages: chloroplast
messages: chromoplast

3702:AT5G38460
gene id: 3702:AT5G38460
uniprot id: Q9FF17
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Adds the first glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Man(9)GlcNAc(2)-PP-Dol (By similarity).
messages: Belongs to the ALG6/ALG8 glucosyltransferase family.
messages: Endoplasmic reticulum membrane

3702:AT2G31190
gene id: 3702:AT2G31190
uniprot id: A0A178VQ89
uniprot id: A0A178VQM6
uniprot id: Q9SJX7
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RUS1 family.
messages: Expressed throughout the plant, with a higher expression near the root apical meristem, in the cortex region of the root elongation zone, in lateral roots and emerging lateral roots. Not detected in extreme root apical meristem or root cap.
messages: Interacts (via the DUF647 domain) with RUS1 (via the DUF647 domain).
messages: Involved in a root UV-B sensing pathway and in the protection against the hypersensitivity to very low-fluence-rate (VLF) UV-B. RSU1 and RUS2 are probably both negative modulators of the same UV-B perception pathway, which when overstimulated in the roots causes a block to postgermination development. Required for polar auxin transport and to maintain the normal levels of PIN proteins in the root.
messages: No visible phenotype under normal growth conditions. Extremely stunted growth, failure to develop true postembryonic leaves and arrested primary root elongation, when grown in vitro.
messages: Plastid
messages: Several mutations in ASP2 (AC P46645), but not all, and any of the non-phosphorylated B6 vitamers can suppress the rus phenotype.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G38800
gene id: 3702:AT4G38800
uniprot id: Q9T0I8
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
messages: Enzyme of the methionine cycle that catalyzes the irreversible cleavage of the glycosidic bond in 5'-methylthioadenosine (MTA) to adenine and 5'-methylthioribose (PubMed:19249293, PubMed:18342331). Contributes to the maintenance of AdoMet homeostasis and is required to sustain high rates of ethylene synthesis. Inactive towards S-adenosylhomocysteine (SAH/AdoHcy) (PubMed:18342331, PubMed:19249293).
messages: Expressed in roots, leaves, stems, cauline leaves and flowers.
messages: Homodimer (PubMed:19249293, PubMed:16909418). Interacts with CBL3 in a calcium-dependent manner.
messages: Inhibited by CBL3 in a calcium-dependent manner (PubMed:18945934). Inhibited by 5'-methylthiotubercidin (MTT) and by formycin A (FMA) (PubMed:18342331).
messages: No visible phenotype under normal growth condition. Not able to grow with methylthioadenosine (MTA) as unique source of sulfur.

3702:AT3G61450
gene id: 3702:AT3G61450
uniprot id: A0A178VEJ3
uniprot id: A0A1I9LPJ7
uniprot id: A0A1I9LPJ8
uniprot id: A0A1I9LPJ9
uniprot id: A0A1I9LPK0
uniprot id: A0A654FJQ8
uniprot id: A0A7G2EZ63
uniprot id: F4JEA3
uniprot id: Q94KK5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the syntaxin family.
messages: Expressed in root, leaf, stem, flower and silique.
messages: Membrane
messages: Part of the t-SNARE complex.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT3G06320
gene id: 3702:AT3G06320
uniprot id: A0A384KHG6
uniprot id: Q9SQT5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

3702:AT1G74810
gene id: 3702:AT1G74810
uniprot id: A0A178WFC4
uniprot id: A0A1P8ATR0
uniprot id: A0A1P8ATS7
uniprot id: A0A1P8ATS9
uniprot id: Q9SSG5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anion exchanger (TC 2.A.31.3) family.
messages: Membrane
messages: Putative boron transporter. Boron is essential for maintaining the integrity of plants cell walls (By similarity).

3702:AT2G39430
gene id: 3702:AT2G39430
uniprot id: A0A178VVD6
uniprot id: O80630
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT3G62470
gene id: 3702:AT3G62470
uniprot id: A0A178V820
uniprot id: Q9LZP3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT2G37200
gene id: 3702:AT2G37200
uniprot id: A0A1P8B2T8
uniprot id: A0A654EZP0
uniprot id: Q6NPF8
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT2G22970
gene id: 3702:AT2G22970
uniprot id: A0A178VLX4
uniprot id: A0A1P8AXC6
uniprot id: A8MQP0
uniprot id: Q2V465
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Probable carboxypeptidase.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT5G46680
gene id: 3702:AT5G46680
uniprot id: Q56XR6
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G13190
gene id: 3702:AT3G13190
uniprot id: Q9LK53
names: Similarity
messages: Belongs to the WEB family.

3702:AT1G20060
gene id: 3702:AT1G20060
uniprot id: A0A1P8ATM8
uniprot id: A0A1P8ATN1
uniprot id: A0A1P8ATN3
uniprot id: A0A1P8ATN4
uniprot id: A0A1P8ATN6
uniprot id: A0A1P8ATP9
uniprot id: A0A1P8ATQ5
uniprot id: A0A1P8ATR5
uniprot id: A0A1P8ATS3
uniprot id: A0A654EM76
uniprot id: F4HR11
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-6 subfamily.

3702:AT1G71710
gene id: 3702:AT1G71710
uniprot id: A0A178WAF8
uniprot id: A0A178WAM3
uniprot id: F4IA20
uniprot id: Q8H0Z6
names: Caution
names: Function
names: Similarity
messages: Belongs to the inositol polyphosphate 5-phosphatase family.
messages: Has phosphatase activity toward PtdIns(4,5)P2 and PtdIns(3,4,5)P3.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G17790
gene id: 3702:AT3G17790
uniprot id: A0A178VF50
uniprot id: Q9SCX8
names: Activity Regulation
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 iron ions per subunit.
messages: By phosphate starvation, during senescence, by ABA, by H(2)O(2), and by salt stress.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Inhibited by phosphate and molybdate.
messages: Metallo-phosphoesterase involved in phosphate metabolism. Has a peroxidase activity.
messages: Secreted

3702:AT1G51120
gene id: 3702:AT1G51120
uniprot id: Q9C688
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. RAV subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT4G40000
gene id: 3702:AT4G40000
uniprot id: A0A1P8B8U2
uniprot id: F4JJ52
names: Caution
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT5G10540
gene id: 3702:AT5G10540
uniprot id: A0A178UD97
uniprot id: Q949P2
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M3 family.
messages: Binds 1 zinc ion.
messages: Inhibited by salicylic acid.
messages: No effect on germination.
messages: Oligopeptidase that may be involved in the degradation of proteasome-generated peptides (By similarity). Binds salicylic acid.
messages: Up-regulated by pathogen infection, elicitor treatment and flg22, a 22-amino acid sequence of the conserved N-terminal part of flagellin.
messages: Up-regulated during senescence.
messages: cytosol

3702:AT5G57360
gene id: 3702:AT5G57360
uniprot id: A0A178UDC5
uniprot id: F4KAN2
uniprot id: Q94BT6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Adagio' means slowly in Italian.
messages: 'Zeitlupe' means slow motion in German.
messages: Accumulation of ADO3 protein during the morning period and early flowering time.
messages: Belongs to the ADAGIO family.
messages: Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light-regulated protein degradation of critical clock components by targeting them to the proteasome complex. The SCF(ADO1) E3 ubiquitin ligase complex is involved in the regulation of circadian clock-dependent processes including the transition to flowering time, hypocotyl elongation, cotyledons and leaf movement rhythms. APRR1/TOC1 and APRR5, but not 'GIGANTEA', are proteolytic substrates of this ubiquitin ligase complex. Blue light enhances cooperative stabilization of 'GIGANTEA' and ADO1/ZTL, leading to amplification and sharpening of the expression profile of APRR1/TOC1. ADO1/ZTL interacts with ADO3, preventing the interaction of ADO3 with CDF1.
messages: Cytoplasm
messages: FMN binds covalently to cysteine after exposure to blue light and is reversed in the dark.
messages: Interacts with NFXL2. Interacts (via N-terminus) with GI and (via Kelch repeats) with ADO3. Component of an E3 ubiquitin ligase SCF(ADO1) complex composed of SKP1A/ASK1 (or SKP1B/ASK2), CUL1, RBX1 and ADO1. Also interacts with SKP1D/ASK4, SKP1K/ASK11, CRY1, PHYB, APRR1 and APRR5, and probably with SKP1N/ASK14 and SKP1S/ASK19.
messages: Mainly present during the light phase, and degraded in a proteasome-dependent manner in dark (at protein level).
messages: May be ubiquitinated. Degraded in a proteasome-dependent manner.
messages: Not regulated at the transcript level, but circadian-regulation at the protein level with a peak at the end of the subjective day.
messages: Nucleus
messages: Ubiquitously expressed with higher levels in cotyledons and leaves.

3702:AT5G61130
gene id: 3702:AT5G61130
uniprot id: Q9FNQ2
names: Function
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Able to bind (1->3)-beta-D-glucans (laminarin). Probably involved in cell-to-cell trafficking regulation.
messages: Cell membrane
messages: Contains two additional disulfide bonds.
messages: Expressed in the shoot apical region and in young leaves but also detected in the laminar and vasculature of mature leaves.
messages: Overexpression of PDCB1 results in callose accumulation and decreased plasmodesmal molecular diffusion.
messages: plasmodesma

3702:AT2G25737
gene id: 3702:AT2G25737
uniprot id: A0A1P8B1L3
uniprot id: A0A654EXR3
uniprot id: Q8L7A0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Membrane

3702:AT1G77440
gene id: 3702:AT1G77440
uniprot id: A0A5S9WVA0
uniprot id: O81153
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1B family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: Non-catalytic component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Nucleus

3702:AT3G62590
gene id: 3702:AT3G62590
uniprot id: A0A178V8P3
uniprot id: Q940L4
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Induced by abscisic acid (ABA) and cold stress.
messages: Plants overexpressing PLIP3 exhibit stunted growth and accumulate anthocyanin under normal growth conditions.
messages: Sn-1-specific phospholipase A1 that catalyzes the initial step of oxylipins and jasmonate (JA) biosynthesis. Hydrolyzes polyunsaturated acyl groups preferentially from chloroplastic phosphatidylglycerol (PG). May function downstream of abscisic acid (ABA), and provide a link between ABA-mediated abiotic stress responses and oxylipin and JA signalings. In vitro, possesses broad substrate specificity. Can hydrolyze the galactolipids monogalactosyldiacylglycerol (MGDG) and digalactosyldiacylglycerol (DGDG), the sulfolipid sulfoquinovosyldiacylglycerol (SQDG), and the phoshpolipids phosphatidylcholine (PC), and phosphatidylglycerol (PG).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast membrane

3702:AT5G20380
gene id: 3702:AT5G20380
uniprot id: A0A1P8BAK7
uniprot id: A0A7G2FFD2
uniprot id: Q3E9A0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.
messages: Expressed in leaf veins and sepals.
messages: Expressed with a circadian rhythm showing a peak during the middle of the day (under long day conditions).
messages: Inorganic phosphate and probable anion transporter.
messages: Membrane
messages: chloroplast membrane

3702:AT2G27720
gene id: 3702:AT2G27720
uniprot id: A0A178VQE0
uniprot id: A0A1P8B2C7
uniprot id: F4IGR4
uniprot id: F4IGR5
uniprot id: P51407
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein P1/P2 family.
messages: P1 and P2 exist as dimers at the large ribosomal subunit.
messages: Phosphorylated.
messages: Plays an important role in the elongation step of protein synthesis.

3702:AT3G12050
gene id: 3702:AT3G12050
uniprot id: A0A384LMS3
uniprot id: F4J8L7
uniprot id: Q9LHL7
names: Similarity
messages: Belongs to the AHA1 family.

3702:AT4G27180
gene id: 3702:AT4G27180
uniprot id: A0A178UZY6
uniprot id: P46864
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: Bind to microtubules in an ATP-insensitive manner (in vitro). Homodimer and heterodimer with KIN14N/KATC (in vitro).
messages: Composed of three structural domains; a small globular N-terminal, a central alpha-helical coiled coil and a large globular C-terminal which is responsible for the motor activity (it hydrolyzes ATP and binds microtubules).
messages: cytoskeleton

3702:AT4G01760
gene id: 3702:AT4G01760
uniprot id: A0A178V4I1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G50680
gene id: 3702:AT1G50680
uniprot id: Q9C6P5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. RAV subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G15640
gene id: 3702:AT3G15640
uniprot id: Q9LW15
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 5B (TC 3.D.4.11) family.
messages: Mitochondrion inner membrane
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.

3702:AT1G63030
gene id: 3702:AT1G63030
uniprot id: Q9SGJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold or dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation.

3702:AT2G31610
gene id: 3702:AT2G31610
uniprot id: A0A178VT49
uniprot id: Q9SIP7
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Interacts with SNRNP35.

3702:AT4G37140
gene id: 3702:AT4G37140
uniprot id: A0A178UX87
uniprot id: A0A1P8B6T5
uniprot id: F4JRA6
names: Caution
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Could be the product of a pseudogene. The protein is truncated and lacks two of the residues of the predicted catalytic triad, suggesting that it does not have this enzymatic activity.
messages: Methylesterase.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G01230
gene id: 3702:AT4G01230
uniprot id: Q9M145
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3702:AT5G58560
gene id: 3702:AT5G58560
uniprot id: A0A654GC86
uniprot id: Q67ZM7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polyprenol kinase family.
messages: Down-regulated by abscisic acid.
messages: Increased sensitivity to abscisic acid.
messages: Kinase involved in negative regulation of abscisic acid (ABA) signaling. Substrate preference is farnesol > geraniol > geranylgeraniol, but has no activity with farnesyl phosphate. Can use CTP > ATP > GTP = UTP as phosphoryl donor.
messages: Membrane
messages: chloroplast membrane

3702:AT5G07430
gene id: 3702:AT5G07430
uniprot id: Q9LY17
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in flower buds.
messages: cell wall

3702:AT3G12340
gene id: 3702:AT3G12340
uniprot id: F4J9Q6
names: Function
names: Similarity
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).

3702:AT3G55970
gene id: 3702:AT3G55970
uniprot id: A0A178V764
uniprot id: A0A1I9LLN9
uniprot id: Q9LY48
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: 2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway (PubMed:28760569, PubMed:28559313). Converts JA to 12-hydroxyjasmonate (12OH-JA), an inactive form of JA (PubMed:28760569, PubMed:28559313). Is specific to free JA, and cannot oxidize the bioactive form jasmonoyl-L-isoleucine (JA-Ile) or other JA-amino acid conjugates (PubMed:28760569). Prevents over-accumulation of JA and indirectly its bioactive form JA-Ile under stress response (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense signaling, by contributing to 12OH-JA accumulation, which represses JA defense responses upon infection by the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense responses upon infestation by the herbivorous caterpillar Mamestra brassicae (PubMed:28559313).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Induced by methyl jasmonate (MeJA) (PubMed:20565618, PubMed:28559313). Induced by infection with the bacterial pathogen Pseudomonas syringae pv. maculicola (PubMed:20565618, PubMed:15098125). Induced by wounding (PubMed:17544464, PubMed:28760569). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Induced by infestation with the caterpillar Mamestra brassicae (PubMed:28559313).
messages: The quadruple mutant jox1, jox2, jox3 and jox4 exhibit reduced root and shoot growth, delayed flowering, reduced seed production, constitutively elevated jasmonate and jasmonoyl-L-isoleucine levels, and enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae.

3702:AT1G29550
gene id: 3702:AT1G29550
uniprot id: A0A178W1I7
uniprot id: Q9C7P6
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: According to the redox status, the Cys-138-Cys-176 disulfide bridge may have a role in regulating protein function by affecting its ability to bind capped mRNA.
messages: Belongs to the eukaryotic initiation factor 4E family.
messages: Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome (By similarity). Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity).
messages: Cytoplasm
messages: EIF4F is a multi-subunit complex, the composition of which varies with external and internal environmental conditions (PubMed:16343979). It is composed of at least EIF4A, EIF4E and EIF4G (PubMed:16343979). EIF4E is also known to interact with other partners (PubMed:16343979). In higher plants two isoforms of EIF4F have been identified, named isoform EIF4F and isoform EIF(iso)4F (PubMed:16343979). Isoform EIF4F has subunits p220 and p26, whereas isoform EIF(iso)4F has subunits p82 and p28 (PubMed:16343979).
messages: Nucleus

3702:AT3G63540
gene id: 3702:AT3G63540
uniprot id: P82658
names: Subcellular Location Annotation
messages: chloroplast thylakoid lumen

3702:AT5G39960
gene id: 3702:AT5G39960
uniprot id: A0A654G6H2
uniprot id: F4KFX1
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.

3702:AT4G27585
gene id: 3702:AT4G27585
uniprot id: A0A178UVT3
uniprot id: Q93VP9
names: Similarity
messages: Belongs to the band 7/mec-2 family.

3702:AT5G11450
gene id: 3702:AT5G11450
uniprot id: P82715
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbP family.
messages: Involved in strigolactone biosynthesis.
messages: Smaller plants and frequent morphological defects, including increased lateral root branching, aerial rosettes and multiple rosettes. No effect on photosystem II and linear photosynthetic electron transfer.
messages: chloroplast thylakoid lumen

3702:AT5G54610
gene id: 3702:AT5G54610
uniprot id: Q8GYH5
names: Function
names: Subcellular Location Annotation
messages: Cell membrane
messages: Involved in plant defense. Required for basal resistance against Pseudomonas syringae pv. tomato DC3000. Required for resistance against nonpathogenic bacteria. May be involved in signaling components that function downstream of SNC2 and upstream of NPR1 and WRKY70 to regulate defense responses.

3702:AT2G39530
gene id: 3702:AT2G39530
uniprot id: A0A654F0A3
uniprot id: Q8GWD5
names: Caution
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Expressed in the root epidermis.
messages: Homodimer and heterodimers.
messages: In the root epidermis, expressed transiently in the root maturation zone.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT1G09960
gene id: 3702:AT1G09960
uniprot id: A0A5S9TJ78
uniprot id: Q9FE59
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Also present in inflorescence axil branches and in anther and pistil of developing flowers (PubMed:10948254). At anthesis, restricted to anthers (PubMed:10948254).
messages: Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.
messages: Cell membrane
messages: Expressed in sink tissues, mostly in minor veins of sink leaves. Localized in companion cells.
messages: Homodimer. Interacts with SUC2 and SUC3.
messages: Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system) (PubMed:10948254). Can also transport maltose at a lesser rate. May also transport biotin (PubMed:10948254).
messages: Specifically induced by H.schachtii (cyst nematodes) in nematode-induced syncytia.

3702:AT3G13580
gene id: 3702:AT3G13580
uniprot id: A0A178VHA2
uniprot id: Q9LHP1
names: Similarity
messages: Belongs to the universal ribosomal protein uL30 family.

3702:AT1G56560
gene id: 3702:AT1G56560
uniprot id: Q9FXA8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 100 family.
messages: By hydrogen peroxide (H(2)O(2)).
messages: Expressed in seedlings, roots and flowers.
messages: Mitochondrial invertase that cleaves sucrose into glucose and fructose and is involved in the regulation of multiple tissue development and floral transition. May generate glucose as a substrate for mitochondria-associated hexokinase, contributing to mitochondrial reactive oxygen species homeostasis.
messages: Mitochondrion
messages: Reduced primary root length and number of lateral roots. Reduced plant growth, delayed flowering, increased expression of antioxidant genes under basal conditions and reduced oxygen consumption in the dark.

3702:AT3G22270
gene id: 3702:AT3G22270
uniprot id: F4J077
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Activator of mRNA decapping. Involved in mRNA decay via decapping (By similarity). Involved in the regulation of root stem cell niche identity. Maintains root stem cell niche stability through the interaction with the negative regulator of jasmonate signaling AFPH2/NINJA, and the regulation of cell division (PubMed:26956135).
messages: Enhanced root distal stem cell differentiation and increased mitotic activity in root quiescent center.
messages: Expressed in root vasculature, shoot apical meristem (SAM) and leaves.
messages: Interacts with AFPH2/NINJA.

3702:AT1G07880
gene id: 3702:AT1G07880
uniprot id: A0A178WHV9
uniprot id: A0A654EIG6
uniprot id: Q9LQQ9
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by threonine and tyrosine phosphorylation (By similarity). Activated by the MAP kinase kinase MKK6 in vitro.
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-191 and Tyr-193, which activates the enzyme.
messages: Expressed in roots, stems and flower buds.
messages: Interacts with MKK6.
messages: MKK6-MPK13 module positively regulates lateral root formation.
messages: May be due to an intron retention.
messages: RNAi MPK13 displays fewer lateral roots.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G45370
gene id: 3702:AT5G45370
uniprot id: A0A178UG70
uniprot id: A0A1P8BCG3
uniprot id: F4KD68
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G40080
gene id: 3702:AT4G40080
uniprot id: A0A384KET6
uniprot id: A1A6G6
uniprot id: Q8L936
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: Vesicle
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT3G47830
gene id: 3702:AT3G47830
uniprot id: F4JCQ3
names: Similarity
messages: Belongs to the DNA glycosylase family.

3702:AT1G12150
gene id: 3702:AT1G12150
uniprot id: A0A654EJU8
uniprot id: Q9FWW5
names: Similarity
messages: Belongs to the WEB family.

3702:AT3G16810
gene id: 3702:AT3G16810
uniprot id: Q9LRZ3
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).
messages: nucleolus

3702:AT1G13420
gene id: 3702:AT1G13420
uniprot id: Q9FX56
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Expressed in seedlings and roots.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor. No activity with brassinosteroids.
messages: Up-regulated by trans-zeatin.

3702:AT5G51740
gene id: 3702:AT5G51740
uniprot id: A0A1P8BD73
uniprot id: Q9FLI5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M48 family.
messages: Belongs to the peptidase M48A family.
messages: Binds 1 zinc ion per subunit.
messages: Homooligomer.
messages: Mitochondrion inner membrane
messages: Protease that is part of the quality control system in the inner membrane of mitochondria (By similarity). Metalloendopeptidase that modulates the oxidative phosphorylation (OXPHOS) system and plant growth (PubMed:28936218). Involved in tolerance mechanisms to heat, osmotic and oxidative stresses (PubMed:28936218).
messages: Retarded root growth and slight reduction in root length (PubMed:28936218). Increased sensitivity to heat stress (30 degrees Celsius), osmotic stress (mannitol) and oxidative stress (paraquat) leading to decreased seedling size and reduced root length (PubMed:28936218). Reduced activity of the oxidative phosphorylation (OXPHOS) system complex V and, in moderate heat stress conditions, of complex I and supercomplex I+III(2) (PubMed:28936218).

3702:AT1G27410
gene id: 3702:AT1G27410
uniprot id: Q9FZJ4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G31180
gene id: 3702:AT1G31180
uniprot id: A0A178W4A1
uniprot id: A0A1P8AUM8
uniprot id: Q9SA14
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
messages: Homodimer.
messages: Involved in leucine biosynthesis; catalyzes the oxidative decarboxylation step in leucine biosynthesis (primary metabolism) (PubMed:21697089). Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate, 3-IPM) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (PubMed:15849421, PubMed:20840499).
messages: Mostly expressed constitutively at high levels in seedlings, cotyledons, hypocotyls, flowers, pollen and leaves and, to a lower extent, in roots and stems.
messages: No discernible vegetative or reproductive phenotypes, but decreased leucine biosynthetic enzyme activities and lower free leucine concentrations.
messages: Regulated by a thiol-based redox modification.
messages: Transactivated by MYB28.
messages: chloroplast stroma

3702:AT3G50070
gene id: 3702:AT3G50070
uniprot id: A0A178VE15
uniprot id: Q9SN11
names: Function
names: Induction
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin D subfamily.
messages: Promotes divisions in the guard cells (GCs) after the guard mother cells (GMC) symmetric division.
messages: Up-regulated by the transcription factor ERF114.

3702:AT4G02610
gene id: 3702:AT4G02610
uniprot id: A0A178UX50
uniprot id: O22765
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TrpA family.
messages: Cytoplasm
messages: Mostly present in vascular tissues. In flowers, expressed in carpels, stamens and pollen.
messages: Tetramer of two alpha and two beta chains.
messages: The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate (By similarity). Contributes to the tryptophan-independent indole biosynthesis, and possibly to auxin production.
messages: Ubiquitously expressed at low levels in seedlings, roots, hypocotyls, cotyledons, stems, leaves, inflorescences, flowers, siliques and seeds.

3702:AT1G10050
gene id: 3702:AT1G10050
uniprot id: A0A1P8AUA7
uniprot id: O80596
names: Domain
names: Function
names: Similarity
messages: Belongs to the glycosyl hydrolase 10 (cellulase F) family.
messages: Binds to and hydrolyzes insoluble and soluble xylan substrates.
messages: The GH10 domain binds to xylan.

3702:AT2G22121
gene id: 3702:AT2G22121
uniprot id: P82750
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G09740
gene id: 3702:AT4G09740
uniprot id: Q9SZ90
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.
messages: Secreted

3702:AT1G10340
gene id: 3702:AT1G10340
uniprot id: A0A178WFS3
uniprot id: F4I4B0
uniprot id: Q9SY76
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G19310
gene id: 3702:AT1G19310
uniprot id: A0A178WF20
uniprot id: Q9LN67
names: Domain
names: Function
names: Subcellular Location Annotation
messages: E3 ubiquitin-protein ligase.
messages: Endoplasmic reticulum membrane
messages: The RING-type zinc finger domain is responsible for E3 ligase activity.

3702:AT2G24710
gene id: 3702:AT2G24710
uniprot id: A0A1P8B2P3
uniprot id: A0A1P8B2P4
uniprot id: Q9SHV2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane

3702:AT1G17100
gene id: 3702:AT1G17100
uniprot id: A0A178W6J0
uniprot id: Q9SHG8
names: Similarity
messages: Belongs to the HEBP family.

3702:AT1G02570
gene id: 3702:AT1G02570
uniprot id: A0A178W721
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G14870
gene id: 3702:AT1G14870
uniprot id: Q9LQU4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cornifelin family.
messages: Cell membrane
messages: Constitutively expressed. Up-regulated in the shoots by cadmium. Down-regulated under zinc deficiency.
messages: Expressed in roots, leaves, shoots, stems, flowers and siliques. In leaves, restricted mainly to the vascular tissue. Expressed in all cells in the root tip, in the vascular tissue and the epidermis in the elongation zone, and only in the epidermal cells in the root hair zone.
messages: Homooligomer.
messages: Strongly impaired growth in the presence of heavy metals such as zinc, cadmium, copper or iron.
messages: Zinc transporter acting in both zinc extrusion and long-distance zinc transport. Involved in the loading of zinc into the xyleme and in the detoxification of excess zinc at the epidermal cells. Acts independently from the zinc transporters HMA2 and HMA4. May be also involved in cadmium resistance.

3702:AT4G21090
gene id: 3702:AT4G21090
uniprot id: Q8S904
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associates with the adrenodoxin reductase MFDR to form an efficient low potential electron transfer chain that is able to reduce cytochrome C.
messages: Belongs to the adrenodoxin/putidaredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Mitochondrion

3702:AT1G13195
gene id: 3702:AT1G13195
uniprot id: A0A178WNH2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G44910
gene id: 3702:AT2G44910
uniprot id: A0A384LKZ1
uniprot id: C0SV86
uniprot id: P92953
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: By transition from light to far-red light.
messages: Nucleus
messages: Probable transcription factor.

3702:AT5G06760
gene id: 3702:AT5G06760
uniprot id: A0A178UIZ0
uniprot id: Q9FG31
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
messages: Belongs to the LEA type 1 family.
messages: By dehydration stress.
messages: Expressed during embryo development and in dry seed. Expression decreases significantly after seed germination.
messages: Involved dehydration tolerance. Involved in the adaptive response of vascular plants to withstand water deficit (PubMed:20668063). May possess chaperone-like activity under water deficit (PubMed:27006402).
messages: Over-expression of LEA46 confers plant tolerance to severe drought (PubMed:20668063). Under water deficit, the N-terminal region is necessary and sufficient for conformational transition from disordered to alpha-helix folding. This conformational transition is required for chaperone-like activity under water limitation (PubMed:27006402).

3702:AT4G23590
gene id: 3702:AT4G23590
uniprot id: Q8VYP2
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

3702:AT1G70560
gene id: 3702:AT1G70560
uniprot id: Q9S7N2
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the alliinase family.
messages: Cytoplasm
messages: Expressed at the leaf margin and in the vasculature of emerging young leaves. Expressed in the quiescent center and in the vasculature of root tips. Detected in the shoot apical meristem, stems, sepals, stamen filaments, the shoot and root junction, the stigma and the base of the silique.
messages: In the heart stage embryo, expressed in the developing vasculature and the apical epidermal layer. At the torpedo stage expressed in the developing vasculature of the root, hypocotyl and cotyledons, as well as in the L1 layer of the presumptive shoot apical meristem and the adaxial epidermis of the developing cotyledons. In flowers, the expression is first restricted to the central outer layers of flower primordia, but later expands toward the base of gynoecia, becoming limited to two cell files along the meristematic medial ridge.
messages: Inhibited by L-kynurenine.
messages: L-tryptophan aminotransferase involved in auxin (IAA) biosynthesis. Can convert L-tryptophan and pyruvate to indole-3-pyruvic acid (IPA) and alanine. Catalyzes the first step in IPA branch of the auxin biosynthetic pathway. Required for auxin production to initiate multiple change in growth in response to environmental and developmental cues. It is also active with phenylalanine, tyrosine, leucine, alanine, methionine and glutamine. Both TAA1 and TAR2 are required for maintaining proper auxin levels in roots, while TAA1, TAR1 and TAR2 are required for proper embryo patterning. Involved in the maintenance of the root stem cell niches and required for shade avoidance.
messages: No visible phenotype under normal growth condition, but exhibits reduced levels of auxin (IAA), reduced auxin response, reduced sensitivity to ethylene and shorter hypocotyls and petioles but larger leaf area when grown in simulated shade. Defective in root gravitropic response and shows an increased resistance to cytokinin in primary root growth.
messages: Up-regulated by trans-zeatin, ethylene and high temperature. Down-regulated by auxin and shade treatment.

3702:AT5G27820
gene id: 3702:AT5G27820
uniprot id: A0A178UJ63
uniprot id: Q8LDK5
names: Similarity
messages: Belongs to the universal ribosomal protein uL18 family.

3702:AT1G09030
gene id: 3702:AT1G09030
uniprot id: A0A384L7L3
uniprot id: C0SUU0
uniprot id: O04027
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
messages: Expressed in flowers, siliques and young rosettes.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Nucleus

3702:AT1G77470
gene id: 3702:AT1G77470
uniprot id: A0A178WIQ9
uniprot id: Q9CAQ8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the activator 1 small subunits family.
messages: By salicylic acid (SA).
messages: Functions in cell replication and proliferation. May be involved in chromatin assembly and remodeling. Plays a role in the negative control of pathogenesis-related gene expression and systemic acquired resistance (SAR).
messages: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can form a complex with RFC1.
messages: Moderately dwarfed plants with small organs due to reduced cell proliferation rate. Enhanced resistance to pathogens.
messages: Nucleus

3702:AT2G34825
gene id: 3702:AT2G34825
uniprot id: A8MQL7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT5G57870
gene id: 3702:AT5G57870
uniprot id: A0A5S9YFN4
uniprot id: Q93ZT6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic initiation factor 4G family.
messages: Displays resistance to potyvirus (PPV or LMV) infection. I4g1/i4g2 double mutants show reduced germination rates, slow growth rates, moderate chlorosis, late flowering, impaired fertility and reduced long term seed viability. They also exhibit altered responses to dehydration, salinity, and heat stress. The i4g1 and i4g2 double mutant has reduced amounts of chlorophyll a and b.
messages: EIF4F is a multi-subunit complex, the composition of which varies with external and internal environmental conditions. It is composed of at least EIF4A, EIF4E and EIF4G. In higher plants two isoforms of EIF4F have been identified, named isoform EIF4F and isoform EIF(iso)4F. Isoform EIF4F has subunits p220 and p26, whereas isoform EIF(iso)4F has subunits p82 and p28.
messages: Plays a role in the accumulation of some potyvirus during viral infection.

3702:AT5G19520
gene id: 3702:AT5G19520
uniprot id: A0A654G2J2
uniprot id: Q84M97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Cell membrane
messages: Detected in the epidermis, cortex, and endodermis of the root tip.
messages: Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer.
messages: Membrane

3702:AT2G27700
gene id: 3702:AT2G27700
uniprot id: F4IGQ9
uniprot id: Q9ZUX2
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.

3702:AT1G49530
gene id: 3702:AT1G49530
uniprot id: O22043
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.
messages: Mitochondrion
messages: Monomer.

3702:AT1G18950
gene id: 3702:AT1G18950
uniprot id: F4IDY7
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts (via the DDT domain) with CHR11 (via C-terminus).
messages: Nucleus
messages: Probable transcription regulator.

3702:AT2G20830
gene id: 3702:AT2G20830
uniprot id: Q9SKT4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the formiminotransferase family.
messages: Delayed root growth when grown in high-concentration 1/2 MS agar culture medium; in these conditions, roots are wider and exhibit anomalies, such as swollen and irregular cells in the root transition and elongation zones (PubMed:35637390). Slower secretion in the root cap peripheral cells resulting in a significantly reduced monosaccharides content in the culture medium (PubMed:35637390).
messages: Expressed constitutively in roots, stems, leaves and flowers.
messages: Involved in the regulation of root growth (PubMed:35637390). May regulate sorting and/or transportation of trans-Golgi network (TGN) vesicles in root cap peripheral cells, thus influencing the extracellular secretion of mucilage components in the root cap (PubMed:35637390).
messages: Observed in root cap cells.
messages: trans-Golgi network

3702:AT3G15020
gene id: 3702:AT3G15020
uniprot id: A0A7G2EQA6
uniprot id: A8MQK3
uniprot id: Q9LKA3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organelle compartments (Probable). Required for carbon dioxide and energy partitioning in leaves. May limit photorespiration during the dark phase (PubMed:20876337, PubMed:27208265). Can convert 2-ketoglutarate to L-2-hydroxyglutarate in vitro (PubMed:26203119).
messages: Expressed in rosette leaves at low levels.
messages: Homodimer.
messages: Mitochondrion matrix
messages: No visible phenotype under normal growth conditions, but the double mutant plants mmdh1 and mmdh2 have decreased germination rate, grow slowly, are small, have increased photorespiration and die before producing seeds.

3702:AT3G08620
gene id: 3702:AT3G08620
uniprot id: Q8GYR4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G52640
gene id: 3702:AT1G52640
uniprot id: Q9SSR6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G26720
gene id: 3702:AT1G26720
uniprot id: A0A178WAZ7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G63410
gene id: 3702:AT3G63410
uniprot id: A0A178VHS6
uniprot id: Q9LY74
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.
messages: Involved in a key methylation step in both tocopherols (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone (MPBQ) to 2,3-dimethyl-6-phytyl-1,4-hydroquinone (DMPQ, a substrate for tocopherol cyclase), and 2-methyl-6-solanyl-1,4-benzoquinone (MSBQ) to plastoquinone.
messages: Pale green seedlings that are lethal when grown on normal conditions.
messages: chloroplast inner membrane

3702:AT3G52270
gene id: 3702:AT3G52270
uniprot id: A0A1I9LTJ0
uniprot id: F4J6V5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TFIIF beta subunit family.
messages: Nucleus

3702:AT4G29350
gene id: 3702:AT4G29350
uniprot id: A0A384LEY9
uniprot id: Q42418
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the profilin family.
messages: Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
messages: Binds to actin monomers and regulates the organization of the actin cytoskeleton (PubMed:21090759). At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (PubMed:26996265, PubMed:16313636, PubMed:29861135). At low concentrations, associates with the poly-proline motif of formins to enhance actin filament elongation rate (PubMed:29861135). Binds G-actin and poly-L-proline with low affinity in vitro (PubMed:19200149). Binds ACT1, ACT7 and ACT11 and inhibits actin polymerization (PubMed:26578694). May be involved in the cross-talk between vesicular trafficking and the actin cytoskeleton (PubMed:21090759). At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (By similarity). Inhibits cell growth of various pathogenic fungal strains (PubMed:30056100). May play a role as antifungal proteins in the defense system against fungal pathogen attacks (PubMed:30056100).
messages: Defects in rosette leaf and inflorescence development.
messages: Endoplasmic reticulum
messages: Expressed in vascular bundles of roots, hypocotyls, cotyledons, leaves, sepals, petals, stamen filaments and stalks of developing seeds (PubMed:8771785, PubMed:16361517). Expressed in leaf epidermal cells, trichomes and stem epidermal cells (PubMed:19200149). Detected in phloem exudates (at protein level) (PubMed:30056100).
messages: Induced by treatment with brefeldin A.
messages: Nucleus
messages: Occurs in many kinds of cells as a complex with monomeric actin in a 1:1 ratio.
messages: cytoskeleton
messages: cytosol

3702:AT5G47360
gene id: 3702:AT5G47360
uniprot id: Q9LVS3
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G51690
gene id: 3702:AT1G51690
uniprot id: A0A178WBC1
uniprot id: A0A1P8AUA0
uniprot id: A0A654EHJ3
uniprot id: F4I9M3
uniprot id: Q38821
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B family.
messages: Expressed ubiquitously.
messages: May be due to a competing donor splice site.
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (By similarity). Interacts with SIC/RON3 (PubMed:26888284).
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment.

3702:AT5G62070
gene id: 3702:AT5G62070
uniprot id: A0A178UJA3
uniprot id: Q9FIT1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
messages: Nucleus
messages: cytoskeleton
messages: nucleolus

3702:AT4G27050
gene id: 3702:AT4G27050
uniprot id: A0A178V097
uniprot id: Q9SZ44
names: Caution
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex.
messages: The F-box is necessary for the interaction with ASK proteins (By similarity). Interacts with ASK4.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G34160
gene id: 3702:AT1G34160
uniprot id: A0A1P8ATT9
uniprot id: A0A5S9WLP4
uniprot id: A0A7G2DXX1
uniprot id: Q9FX24
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT5G05420
gene id: 3702:AT5G05420
uniprot id: Q9FLB3
names: Function
names: Similarity
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).

3702:AT4G02600
gene id: 3702:AT4G02600
uniprot id: O49621
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: Cell membrane
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT4G00110
gene id: 3702:AT4G00110
uniprot id: O81312
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Golgi stack membrane
messages: Homodimer.
messages: In roots, leaves, siliques, flowers, pollen and stems.
messages: Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components.

3702:AT5G27360
gene id: 3702:AT5G27360
uniprot id: A0A1P8BB18
uniprot id: A0A1P8BB22
uniprot id: A0A1P8BB24
uniprot id: Q94CI6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Expressed in leaf vasculature, stem and flowers.
messages: Membrane
messages: Sugar transporter.

3702:AT4G30560
gene id: 3702:AT4G30560
uniprot id: A0A384L7C9
uniprot id: A0A5S9XXR7
uniprot id: F4JQC2
uniprot id: Q9M0A4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Membrane
messages: Putative cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT1G66610
gene id: 3702:AT1G66610
uniprot id: Q9C6H4
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT5G03770
gene id: 3702:AT5G03770
uniprot id: Q8VZA5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 30 subfamily.
messages: Expressed in leaves, stems and flowers.
messages: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Catalyzes the transfer of two 3-deoxy-D-manno-octulosonate (Kdo) residues from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses.
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions, but plants lacking KDTA accumulate high levels of tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).

3702:AT1G29120
gene id: 3702:AT1G29120
uniprot id: A0A178W4M0
uniprot id: A0A384LQC8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G27890
gene id: 3702:AT4G27890
uniprot id: Q9STN7
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Cytoplasmic granule
messages: Small heat shock protein required for the establishment of auxin gradients and for patterning of the apical domain of the embryo. Involved in the specification of the cotyledon primordia. Also required for normal inflorescence and floral meristem function, normal developmental patterning and thermotolerance. Acts as a molecular chaperone (By similarity).
messages: Up-regulated by heat shock.

3702:AT3G60210
gene id: 3702:AT3G60210
uniprot id: A0A178VCQ5
uniprot id: Q9M1C2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GroES chaperonin family.
messages: Expressed at low levels in germinating seeds, seedlings, rosettes leaves, flowers and siliques.
messages: Functions as co-chaperone for protein folding in chloroplasts.
messages: chloroplast

3702:AT2G01670
gene id: 3702:AT2G01670
uniprot id: Q9ZU95
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: Mitochondrion
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.

3702:AT3G51330
gene id: 3702:AT3G51330
uniprot id: A0A1I9LM45
uniprot id: A0A1I9LM46
uniprot id: A0A384KQ53
uniprot id: Q84WU7
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT2G31210
gene id: 3702:AT2G31210
uniprot id: Q8GX46
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Flowers.
messages: Homodimer.
messages: Nucleus

3702:AT4G24520
gene id: 3702:AT4G24520
uniprot id: A0A178UWR2
uniprot id: F4JQY4
uniprot id: Q9SB48
names: Biotechnology
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NADPH--cytochrome P450 reductase family.
messages: Binds 1 FAD per monomer.
messages: Binds 1 FMN per monomer.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: In the N-terminal section; belongs to the flavodoxin family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Saccharomyces cerevisiae expressing Glycyrrhiza uralensis CYP88D6 and CYP72A154, combined with the expression of Arabidopsis thaliana beta-amyrin synthase (beta-AS) and NADPH-cytochrome P450 reductase 1 (ATR1), accumulates glycyrrhetinic acid (GA) and, to lower levels, beta-amyrin; these GA production was increased in the presence of G.uralensis cytochrome b5 (CYB5).
messages: This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5.
messages: This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Reduces a variety of substrates in vitro, such as cytochrome c, feericyanide and dichloroindophenol.

3702:AT4G29860
gene id: 3702:AT4G29860
uniprot id: Q3MV14
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 'Tanmei' means short life in Japanese.
messages: Accumulates throughout the embryo and in endosperm (PubMed:16113228). Expressed throughout the plant life cycle, from embryogenesis to seed set. Accumulates in the shoot apex. In roots, confined to the vascular system. In anthers, observed when the filaments start to elongate, and remain expressed in later stages. Constitutively expressed in gynoecia (PubMed:22411811).
messages: Belongs to the plant DSE1 protein family.
messages: Cytoplasm
messages: Defects in both embryo and seedling development, and pale yellow seeds. Die as embryos, probably because of intolerance to desiccation and abnormal protein and lipid body accumulation in mature seeds, but immature mutant seeds can be germinated in culture and lead to short life seedlings defective in shoot and root development, with reduced hypocotyls elongation in the dark (PubMed:16113228, PubMed:15266054). Seedlings accumulate less anthocyanin, are intolerant to desiccation, form trichomes on cotyledons, and have reduced accumulation of storage proteins and lipids (PubMed:16113228). Suppressor of the aluminum- (Al) hypersensitive mutant als3-1 that fails to halt root growth after Al exposure, does not accumulate CyclinB1;1 in the root tip, and fails to force differentiation of the quiescent center and is thus highly tolerant to high Al levels (PubMed:22345493). In dse1, reduced plasmodesmata (PD) formation and cell-to-cell transport during embryogenesis, due to reduced PD size exclusion limit. Dse1 embryos are developmentally retarded and accumulate anthocyanin at the junction between the cotyledons and hypocotyls, corresponding to the shoot apical meristem (SAM). Reduced apical dominance leading to the production of small abnormal flowers, often with altered organ numbers. Infertility due in part to the abnormal development of stamen with under-extended anther filaments that don't release pollen, and due in part to abnormal ovules lacking pollen attractiveness (PubMed:22411811).
messages: Expressed at low levels in floral buds, leaves, stems, roots, and siliques, highest levels being in siliques that contain developing seeds.
messages: Involved in the formation of X-, Y-shaped and twinned plasmodesmata (PD), thus modelating PD size exclusion limit and regulating cell-to-cell transport (PubMed:22411811). Cell cycle checkpoint regulator that monitors and responds to DNA damage such as DNA cross-links, and triggers the halt of the cell cycle progression in the presence of DNA cross-linking agents. Mediates the active process of aluminum- (Al) dependent root growth inhibition and thus is required for response to Al toxicity (PubMed:22345493). Required for both early and late phases of embryo development as well as during seedling growth (PubMed:16113228, PubMed:15266054). Essential for signal transduction and development of both male and female organs (PubMed:22411811).
messages: Nucleus

3702:AT2G46590
gene id: 3702:AT2G46590
uniprot id: A0A178VWF7
uniprot id: Q9ZPY0
names: Caution
names: Developmental Stage
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in the vascular system of the mother plant, but not present in the seed and embryo. In maturing siliques, found all through the funiculus connecting the placenta to the ovule, but not in the ovule.
messages: May be due to an intron retention.
messages: Nucleus
messages: The regulatory role of DOF2.5/DAG2 appears to be opposite to that of DOF3.7/DAG1. Both zinc finger proteins may act on a maternal switch that controls seed germination, possibly by regulating the same gene(s).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the activation of a component that would trigger germination as a consequence of red light perception.
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.
messages: Turned off in siliques when they reached full maturation. Not expressed in developing or mature embryos.

3702:AT5G08420
gene id: 3702:AT5G08420
uniprot id: A0A178UIZ9
uniprot id: Q9FT93
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the KRR1 family.
messages: Component of the ribosomal small subunit (SSU) processome.
messages: Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
messages: nucleolus

3702:AT1G19890
gene id: 3702:AT1G19890
uniprot id: A0A178WKL2
uniprot id: Q9FXI7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity).
messages: Detected only in the generative cell and the sperm-cell of late bicellular and tricellular pollen. Not detected in pollen vegetative cells. Replication-independent expression.
messages: No visible phenotype. The high redundancy of histones H3 might compensate for this mutation.
messages: Nucleus
messages: Pollen specific.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA (By similarity).

3702:AT1G16690
gene id: 3702:AT1G16690
uniprot id: A0A178W458
uniprot id: Q9FX82
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enhancer of polycomb family.
messages: Nucleus

3702:AT5G16680
gene id: 3702:AT5G16680
uniprot id: F4KE59
names: Disruption Phenotype
names: Domain
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed ubiquitously.
messages: No obvious developmental defects (PubMed:33433058). The double mutant aipp2-1 paipp2-1 exhibits multiple developmental defects, such as a dwarfed size, early flowering, small leaves and poor fertility (PubMed:33277495). Abnormally up-regulated expression of many genes localized at H3K27me3 and low-methylated H3K4 enriched loci associated with an higher accumulation of activated RNA polymerase II phosphorylated at 'Ser-5' (Ser5P-Pol II) in the double mutant aipp2-1 paipp2-1 (PubMed:33277495). Plants missing all PHD finger-containing proteins (e.g. PHD1, PAIPP2/PHD2, AIPP2/PHD3, PHD4, PHD5 and PHD6) exhibit an increased expression of flowering genes leading to an early flowering phenotype under long-day conditions as well as growth retardation (PubMed:33433058).
messages: Part of the BAH-PHD bivalent histone reader complex that contains AIPP2, PAIPP2 and AIPP3/BDT1; the BAH-PHD module associates with CPL2 to form the BAH-PHD-CPL2 complex (BPC) for transcriptional repression (PubMed:33277495). Binds directly to AIPP3/BDT1 and CPL2, but not to AIPP2 (PubMed:33277495, PubMed:33433058).
messages: The PHD domain (283-334) recognizes specifically unmodified histone H3 lysine 4 (H3K4me0), binding affinity being inversely proportionnal to H3K4 methylation level.
messages: Together with AIPP2 and AIPP3/BDT1, cooperates to form a BAH-PHD bivalent histone reader complex able to read histone H3 lysine 27 trimethylation (H3K27me3) and low-methylated H3K4 histone marks in order to regulate transcription, especially to prevent early flowering; promotes AIPP3/BDT1 binding to H3K27me3 (PubMed:33277495, PubMed:33433058). CPL2 is subsequently recruited to form a BAH-PHD-CPL2 complex (BPC) in order to silence several H3K27me3 and low-methylated H3K4 enriched loci, including AGO5, via the phosphorylation state-dependent inhibition of Pol II release from the transcriptional start site (e.g. Ser5P-Pol II dephosphorylation) (PubMed:33277495). The BPC complex represses flowering by inhibiting the expression of several genes, including AGL6, FT, FUL and SOC1 (PubMed:33277495).

3702:AT5G35600
gene id: 3702:AT5G35600
uniprot id: A0A5S9Y8U8
uniprot id: Q9FH09
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the histone deacetylase family. HD Type 1 subfamily.
messages: Belongs to the histone deacetylase family. HD type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Low expression in flowers.
messages: Nucleus
messages: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. May be involved in flowering induction. Histone deacetylases act via the formation of large multiprotein complexes.

3702:AT1G31010
gene id: 3702:AT1G31010
uniprot id: Q9FYJ2
names: Function
names: Subcellular Location Annotation
messages: Binds single-stranded DNA.
messages: chloroplast

3702:AT2G43640
gene id: 3702:AT2G43640
uniprot id: A0A384KGJ4
uniprot id: B9DGY4
uniprot id: F4IS20
uniprot id: O04421
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SRP14 family.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER) (By similarity). SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP (By similarity). The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity).
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
messages: Cytoplasm
messages: Heterodimer with SRP9; binds RNA as heterodimer (By similarity). Component of a signal recognition particle (SRP) complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9 (By similarity).
messages: Heterodimer with SRP9; binds RNA as heterodimer. Component of a signal recognition particle (SRP) complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.

3702:AT3G06290
gene id: 3702:AT3G06290
uniprot id: A0A384KH48
uniprot id: F4JAU2
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SAC3 family.
messages: Component of the TREX-2 complex (transcription and export complex 2), a muliprotein complex that functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery (PubMed:19843313).
messages: Interacts with SAC3A, EER5 and CML19 (PubMed:19843313). Interacts with UCH1 and UCH2 (PubMed:22951400).
messages: No visible phenotype. Sac3a, sac3b and sac3c triple mutants show no visible phenotype.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G03280
gene id: 3702:AT5G03280
uniprot id: Q9S814
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Oresara' means 'long living' in Korean.
messages: Accumulates upon hypoxia (e.g. submergences) (PubMed:25822663). Expression level is enhanced by a chromatin-dependent epigenetic regulatory mechanism involving both EEN and REF6/EIN6 (PubMed:31418686).
messages: Belongs to the NRAMP (TC 2.A.55) family.
messages: Central factor in signaling pathways regulated by ethylene (ET) and involved in various processes including development, plant defense, senescence, nucleotide sugar flux, and tropisms (PubMed:27694846, PubMed:28874528). Necessary for ethylene-mediated gene regulation, and for the induction of some genes by ozone. Acts downstream of ET receptors, and upstream of ethylene regulated transcription factors. Required for cytokinin-mediated processes. Seems to be implicated in cross-talk between ET, jasmonate and other pathways. Probably not involved in iron uptake (PubMed:10381874, PubMed:12953109, PubMed:14973160, PubMed:15010611, PubMed:15272873, PubMed:7770519, PubMed:9351240). Has a short half-life and undergoes rapid proteasome-mediated turnover in the absence of ethylene (PubMed:19196655). Required for ethylene-induced EIN3 stabilization via proteasomal degradation of EBF1/EBF2 proteins (PubMed:20647342). Regulates the leaf senescence induced by methyl jasmonate, ethylene and abscisic acid (Ref.17, PubMed:15010611). Required during salt stress to confer resistance (PubMed:21631530).
messages: Complete ethylene insensitivity (PubMed:10381874). Extreme salt sensitivity during seed germination and plant growth leading to epinastic backward growth of leaf blade and petiole, and small rosette size (PubMed:21631530). Reduced ethylene-induced histone acetylation of H3K14 and H3K23 associated with a lower induction of ethylene-responsive genes (PubMed:27694846, PubMed:28874528).
messages: Cytoplasm
messages: Endoplasmic reticulum membrane
messages: Interacts (via NLS) with ETR1 (PubMed:19769567, PubMed:25843012). Interacts (via C-terminus) with EER5 and the COP9 signalosome subunits CSN3, CSN6A and CSN6B (PubMed:18429939). Interacts with ETP1 and ETP2 (PubMed:19196655). Interacts with CTR1 (PubMed:23132950). Interacts with all members of the ethylene receptor family, including ETR1, ETR2, ERS1, ERS2 and EIN4 (PubMed:20591837). Binds to MRF3/ECIP1 (PubMed:21631530).
messages: Interacts with several P-body components, such as XRN4/EIN5, PAB2, PAB4 and PAB8 (PubMed:26496607). Binds to ENAP1 in the presence of ethylene; this reaction facilitates its association with histone (PubMed:27694846, PubMed:28874528).
messages: Localized to the guard cells after methyl jasmonate treatment.
messages: Nucleus
messages: Phosphorylated by CTR1 on at least 4 sites. Phosphorylation of Ser-645 and Ser-924 is involved in repressing EIN2 signaling. Loss of phosphorylation results in nuclear localization of the C-terminus of EIN2.
messages: The N-terminal (1-560) region seems to be regulated by upstream components of the ET signal transduction pathway, and may in turn regulate the C-terminal region. The C-terminal (454-1294) region regulates downstream events of ET and jasmonate signaling pathways, and can confer constitutive responses to ET. The C-terminal (1047-1294) region is necessary and sufficient for interactions with ETP1 and ETP2 (PubMed:19196655). The nuclear localization signal (1262-1269) is required for interaction with ETR1 (PubMed:25843012).
messages: Trafficking signal inducing ethylene response. The nuclear localization is both necessary and sufficient to activate EIN3-mediated transcription and ethylene responses (PubMed:23070300). Involved in ethylene (ET)-mediated signaling pathways by triggering histone acetylation of H3K14 and H3K23 in an ENAP1-dependent manner, thus influencing the expression of ethylene-responsive genes (PubMed:27694846, PubMed:28874528). Necessary and sufficient for 3'-UTR-mediated translational repression of EBF1 and EBF2 mRNAs. Ethylene induces EIN2-CEND to associate with 3' UTRs in cytoplasmic foci and target EBF1/2 mRNAs to cytoplasmic processing-body (P-body) (PubMed:26496607, PubMed:26496608). MPK6 regulates the cleavage and nuclear translocation of EIN2-CEND under methyl jasmonate treatment (PubMed:26507893). Required for EIN3 accumulation (PubMed:26507893).

3702:AT1G14400
gene id: 3702:AT1G14400
uniprot id: A0A178WMI7
uniprot id: P25865
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Not induced by heat shock.
messages: Ubiquitously expressed.

3702:AT4G34850
gene id: 3702:AT4G34850
uniprot id: A0A178UTW2
uniprot id: A0A1P8B585
uniprot id: Q8LDM2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Endoplasmic reticulum
messages: Expressed in flowers and flower buds (at protein level) (PubMed:21193570, PubMed:20442277). Mostly confined to anther tapetal cells (PubMed:23632852).
messages: Homodimer (By similarity). Interacts with 4CLL1/ACOS5 and TKPR1 (PubMed:23632852).
messages: Most abundant in the youngest flower buds, but levels decline as flowers mature. Specifically and transiently expressed in tapetal cells during microspore development in anthers (at protein level).
messages: Plant type III polyketide synthases (PKSs) that catalyzes the condensation of malonyl-CoA units with various CoA ester starter molecules to generate a diverse array of natural products including long-chain alkyl alpha-pyrones. Accepts up to C(20) chain-length fatty acyl CoAs as starter substrates, and carries out sequential condensations with malonyl-CoA to produce triketide and tetraketide alpha-pyrones, potential sporopollenin precursors (PubMed:19043200, PubMed:21193570). Favorite substrates for are midchain- and v-hydroxylated fatty acyl-CoAs (e.g. 12-hydroxyoctadecanoyl-CoA and 16-hydroxyhexadecanoyl-CoA). Required for pollen development and sporopollenin biosynthesis, the major constituent of exine in the outer pollen wall (PubMed:21193570, PubMed:20442277). In vitro, can use 4-coumaroyl-coenzyme A as substrate to produce bis-noryangonin and fatty acyl-coenzyme A as substrate to produce medium-chain alkyl pyrones. May play a role in both the synthesis of pollen fatty acids and phenolics found in exine (PubMed:20442277).
messages: Pollen exine layer defects. Reduced accumulation of flavonoid precursors and flavonoids in developing anthers. Plants lacking both PKS-A and PKS-B are completely male sterile, with no apparent exine, thus leading to pollen grain collapse under vacuum. Altered pollen-stigma adhesion.

3702:AT1G29810
gene id: 3702:AT1G29810
uniprot id: A0A1P8AWX1
uniprot id: Q6QJ72
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pterin-4-alpha-carbinolamine dehydratase family.
messages: Involved in tetrahydrobiopterin biosynthesis (By similarity). Possesses pterin-4-alpha-carbinolamine dehydratase activity when expressed in a bacterial heterolgous system (PubMed:18245455).
messages: Mitochondrion

3702:AT5G61100
gene id: 3702:AT5G61100
uniprot id: Q9FNQ5
names: Disruption Phenotype
names: Function
names: Subunit
messages: Interacts directly with AIPP3/BDT1.
messages: No obvious developmental defects (PubMed:33433058). Plants missing all PHD finger-containing proteins (e.g. PHD1, PAIPP2/PHD2, AIPP2/PHD3, PHD4, PHD5 and PHD6) exhibit an increased expression of flowering genes leading to an early flowering phenotype under long-day conditions as well as growth retardation (PubMed:33433058).
messages: Together with AIPP3/BDT1, cooperates to form a BAH-PHD bivalent histone reader complex able to read histone H3 lysine 27 trimethylation (H3K27me3) histone marks in order to regulate transcription, especially to prevent early flowering; promotes AIPP3/BDT1 binding to H3K27me3.

3702:AT4G00360
gene id: 3702:AT4G00360
uniprot id: A0A5S9XPD3
uniprot id: O23066
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By abscisic acid (ABA), auxin, wounding and drought, and in etiolated and dark-adapted seedlings.
messages: Catalyzes the omega-hydroxylation of various fatty acids (FA). Acts on saturated and unsaturated fatty acids with chain lengths from C12 to C18. Plays a major role in the biosynthesis of extracellular lipids. Involved in the biosynthesis of hydroxylated fatty acids required for cutin biosynthesis, cuticle development and repression of bacterial type III gene expression.
messages: Expressed in leaves, stems, flowers and siliques. Expressed at low levels in roots. Expressed in guard cells of cotyledons and leaves.
messages: Expressed in the seed coat inner integument layer facing the endosperm in the stages from globular to torpedo embryo.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants have reduced content of cutin, loose cuticle membrane ultrastructure, show increased permeability to water vapor and display enhanced disease severity to a virulent strain of the bacterial pathogen P.syringae.

3702:AT3G45030
gene id: 3702:AT3G45030
uniprot id: A0A178V9U8
uniprot id: P49200
names: Similarity
messages: Belongs to the universal ribosomal protein uS10 family.

3702:AT4G29160
gene id: 3702:AT4G29160
uniprot id: A0A178V100
uniprot id: Q9SZE4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF7 family.
messages: Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity).
messages: Component of the endosomal sorting required for transport complex III (ESCRT-III), composed at least of VPS2, VPS20, VPS24 and VPS32 (By similarity). Interacts with SKD1 (PubMed:20663085, PubMed:24812106). Interacts with BRO1/ALIX (PubMed:22639582, PubMed:26342016).
messages: Endosome
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G04310
gene id: 3702:AT5G04310
uniprot id: A0A1P8BF75
uniprot id: F4JW80
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT5G42520
gene id: 3702:AT5G42520
uniprot id: A0A178UIB6
uniprot id: A8MQG2
uniprot id: Q8L999
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Alanine-zipper domain is involved in homo- or hetero-dimerization via electrostatic interaction.
messages: Belongs to the BBR/BPC family.
messages: Expressed in seedlings, leaves and pistils. Detected in the base of flowers and tips of carpels, in sepal vasculature, in young rosette, in the lateral and tip of primary roots, and in ovule at the exception of the outer integument.
messages: Homodimer. Heterodimer with BPC4.
messages: Nucleus
messages: Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.
messages: nucleolus

3702:AT1G38065
gene id: 3702:AT1G38065
uniprot id: Q8LNP3
names: Caution
names: Similarity
messages: Belongs to the glycosyltransferase GT106 family.
messages: Lacks the transmembrane domain, which is one of the conserved feature of the family.

3702:AT1G17990
gene id: 3702:AT1G17990
uniprot id: A0A654EBL8
uniprot id: F4I949
uniprot id: P0DI08
uniprot id: P0DI09
names: Function
names: Similarity
messages: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.
messages: Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

3702:AT2G35450
gene id: 3702:AT2G35450
uniprot id: Q682E0
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily.

3702:AT5G47510
gene id: 3702:AT5G47510
uniprot id: F4JYJ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity).

3702:AT2G15240
gene id: 3702:AT2G15240
uniprot id: Q9SKL4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the unc-50 family.
messages: Membrane

3702:AT4G24890
gene id: 3702:AT4G24890
uniprot id: Q8H1R2
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted
messages: Specifically expressed in flowers.

3702:AT3G55672
gene id: 3702:AT3G55672
uniprot id: B3H595
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT3G26490
gene id: 3702:AT3G26490
uniprot id: A0A1I9LS37
uniprot id: Q9LIM6
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT5G40160
gene id: 3702:AT5G40160
uniprot id: Q9SQK3
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed during embryo development and after the bolting stage, in mature culine leaves and in flowers. Not detected at the protein level at the rosette stage of development.
messages: Expressed in roots, inflorescence stems, flowers, siliques, dry seeds and mature cauline leaves.
messages: Interacts with AKR. No homodimerization observed.
messages: Involved in the initial differentiation of the proplastid during the embryo development. Also required for correct cotyledon, true leaf and cauline leaf margin development.
messages: chloroplast

3702:AT5G10620
gene id: 3702:AT5G10620
uniprot id: Q9LXB4
names: Similarity
messages: Belongs to the RNA methyltransferase RlmH family.

3702:AT4G15920
gene id: 3702:AT4G15920
uniprot id: Q84WN3
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a vacuolar hexose transporter (PubMed:25988582). Regulates fructose (Fru) homeostasis in leaves and roots by exporting/importing Fru through the tonoplast regarding metabolic demand (PubMed:23583552, PubMed:24381066).
messages: Belongs to the SWEET sugar transporter family.
messages: Expressed in leaves at low levels, mostly in xylem and parenchyma (PubMed:23583552, PubMed:24381066). Highly expressed in the cortex of roots, predominantly in tips and mature regions, especially in tonoplasts. Accumulates also in cotyledons, stems, flowers, and siliques (PubMed:24381066).
messages: Forms homooligomers and heterooligomers with SWEET1, SWEET2, SWEET3, SWEET4, SWEET6, SWEET7, SWEET8, SWEET9, SWEET11, SWEET12, SWEET13, SWEET15 and SWEET16.
messages: High fructose levels in leaves, especially in vacuoles, due to impaired vacuolar fructose export (PubMed:23583552). Increased root sensitivity to high levels of fructose (PubMed:24381066).
messages: Slightly induced by the fungal pathogen B.cinerea. Accumulates in response to nitrogen deficiency and cold stress. Expression follows a diurnal rhythm with a peak in the middle of the day (PubMed:23583552). Induced in roots by fructose (Fru) and darkness, thus triggering accumulation and release of vacuolar Fru, respectively (PubMed:24381066).
messages: Vacuole membrane

3702:AT2G25060
gene id: 3702:AT2G25060
uniprot id: A0A178VWH0
uniprot id: Q9SK27
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the early nodulin-like (ENODL) family.
messages: Cell membrane
messages: In inflorescences, accumulates mainly in mature pistils (PubMed:27524487). In developing ovules, observed at the micropylar region in a polarized localization of the synergid cells and in inner integument surrounding the female gametophytes (at protein level) (PubMed:27524487). In mature ovules, present in the filiform apparatus and in the integuments at the micropylar region (PubMed:27524487). Levels fade out in ovules after pollination and subsequent fertilization (PubMed:27524487).
messages: Interacts strongly and specifically with the extracellular domain of FERONIA at the synergid cell surface.
messages: May act as a carbohydrate transporter (PubMed:24470637). Required, together with ENODL11, ENODL12, ENODL13, ENODL14 and ENODL15, for male-female communication and pollen tube reception and burst at the synergid cell surface of the female gametophyte (PubMed:27524487).
messages: Mostly expressed in seedlings and flowers, and, to a lower extent, in roots, stems and seeds, but barely in leaves.
messages: No visible phenotype (PubMed:27524487). Plants lacking ENODL11, ENODL12, ENODL13, ENODL14 and ENODL15 have a reduced seed set due to aborted ovules as a result of pollen tubes failling to rupture and release their sperm cell cargo (PubMed:27524487).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G18040
gene id: 3702:AT5G18040
uniprot id: Q9FJF8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the heat induced plant HTT protein family.
messages: Cytoplasm
messages: Expressed ubiquitously, including in seedlings, leaves, stems, inflorescences and siliques.
messages: Mediates both basal and acquired thermotolerance via HSFA1s-directed pathways (e.g. HSFA1A, HSFA1B, and HSFA1D). Triggers the expression of HSFA1A and HSFA1B.
messages: Nucleus
messages: Target of TAS1 (trans-acting siRNA precursor 1)-derived small interfering RNAs in response to temperature variations, thus reducing both basal and acquired thermotolerance (PubMed:24728648, PubMed:20622450). Up-regulated by cold (at 4 degrees Celsius) (PubMed:20622450). Repressed by trans-acting small interfering RNA (ta-siRNAs) siR850/siRNA255-mediated transcript cleavage (PubMed:16889646, PubMed:18753245). Highly up-regulated in seedlings exposed to heat shock. Induced by HSFA1s-mediated (e.g. HSFA1A, HSFA1B, and HSFA1D) promoter activation (PubMed:24728648).

3702:AT2G30050
gene id: 3702:AT2G30050
uniprot id: A0A178VM64
uniprot id: O64740
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat SEC13 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Nucleus envelope
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins. Interacts with MAG5, SEC31A and SEC31B.
messages: Required for protein transport from the endoplasmic reticulum to the Golgi apparatus.
messages: nuclear pore complex

3702:AT4G37320
gene id: 3702:AT4G37320
uniprot id: A0A654FWD0
uniprot id: O23156
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G39010
gene id: 3702:AT4G39010
uniprot id: A0A1P8B8U0
uniprot id: Q93YQ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.
messages: Secreted

3702:AT2G05830
gene id: 3702:AT2G05830
uniprot id: A8MRP9
uniprot id: Q9ZUG4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
messages: Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
messages: Cytoplasm
messages: Nucleus

3702:AT1G06460
gene id: 3702:AT1G06460
uniprot id: A0A5S9SZ36
uniprot id: Q208N7
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

3702:AT2G01900
gene id: 3702:AT2G01900
uniprot id: A0A1P8AXD3
uniprot id: A0A1P8AXI3
uniprot id: A0A654ESQ9
uniprot id: Q9SIS4
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Tissue Specificity
messages: Belongs to the inositol polyphosphate 5-phosphatase family.
messages: Has phosphatase activity toward PtdIns(4,5)P2 and at a lower extent toward PtdIns(3,4,5)P3 but not toward Ins(1,4,5)P3. Functions in salt stress response by regulating reactive oxygen species (ROS) production, endocytosis, Ca(2+) influx and stress-responsive genes expression.
messages: Increased salt sensitivity with reduced production of reactive oxygen species (ROS), reduced Ca(2+) influx, as well as decreased fluid-phase endocytosis.
messages: Sequencing errors.
messages: Specifically expressed in roots.

3702:AT3G49000
gene id: 3702:AT3G49000
uniprot id: A0A384KQ15
uniprot id: Q8LPK6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic RPC3/POLR3C RNA polymerase subunit family.
messages: Component of the RNA polymerase III (Pol III) complex consisting of 17 subunits.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G03620
gene id: 3702:AT3G03620
uniprot id: A0A5S9X923
uniprot id: F4J158
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT4G10100
gene id: 3702:AT4G10100
uniprot id: A0A178USP7
uniprot id: Q9S7A3
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin.
messages: Belongs to the MoaD family. MOCS2A subfamily.
messages: C-terminal thiocarboxylation occurs in 2 steps, it is first acyl-adenylated (-COAMP) via the hesA/moeB/thiF part of MOCS3, then thiocarboxylated (-COSH) via the rhodanese domain of MOCS3.
messages: Cytoplasm
messages: Heterotetramer; composed of 2 small (MOCS2A) and 2 large (MOCS2B) subunits.

3702:AT5G16190
gene id: 3702:AT5G16190
uniprot id: Q9LF09
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like A subfamily.
messages: Golgi apparatus membrane
messages: Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall.

3702:AT1G32060
gene id: 3702:AT1G32060
uniprot id: A0A178WLP9
uniprot id: P25697
names: Activity Regulation
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphoribulokinase family.
messages: Light regulated via thioredoxin by reversible oxidation/reduction of sulfhydryl/disulfide groups.
messages: chloroplast

3702:AT1G44980
gene id: 3702:AT1G44980
uniprot id: Q9MAL0
names: Function
names: Similarity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.

3702:AT5G26690
gene id: 3702:AT5G26690
uniprot id: Q8GWS3
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT4G03400
gene id: 3702:AT4G03400
uniprot id: A0A178UXE0
uniprot id: Q9ZNS2
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin (By similarity). Involved in red light-specific hypocotyl elongation. May act downstream of a red light signal transduction and determine the degree of hypocotyl elongation (PubMed:14581632).
messages: Expressed in cotyledons and hypocotyls.

3702:AT1G12440
gene id: 3702:AT1G12440
uniprot id: A0A178WB83
uniprot id: Q6NNI8
names: Function
messages: May be involved in environmental stress response.

3702:AT2G15630
gene id: 3702:AT2G15630
uniprot id: Q9ZQF1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G24220
gene id: 3702:AT3G24220
uniprot id: A0A7G2EN28
uniprot id: Q9LRM7
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the carotenoid oxygenase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed before fertilization in male and female gametophytes, and then immediately after pollination, restricted to seed endosperm.
messages: Expressed in seeds at early and mid-maturation stages.
messages: Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids. Contributes probably to abscisic acid synthesis for the induction of seed dormancy.
messages: Low induction by drought stress.
messages: Plants exhibit abscisic-acid-deficient phenotypes in seeds, but not in vegetative tissues.
messages: chloroplast stroma

3702:AT4G16420
gene id: 3702:AT4G16420
uniprot id: A0A5S9XTU9
uniprot id: A0A654FQ35
uniprot id: Q9ATB4
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acetylated in vitro by GCN5, but acetylation is not essential for biological activity.
messages: Expressed in roots, leaves, stems, flowers and siliques, with the strongest activity in the meristematic zones.
messages: Interacts in vitro with the HAT domain of GCN5 and with the DNA-binding domain of the transcriptional activator DREB1B/CBF1 (PubMed:11266554, PubMed:16603259). Interacts with BZIP11 (PubMed:24861440).
messages: Nucleus
messages: Plants have pleiotropic effects on plant growth and development, including dwarf size, aberrant root development, and short petals and stamens in flowers. ADA2a cannot rescue any of the mutant phenotypes.
messages: Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region. Mediates auxin and cytokinin signals in the control of cell proliferation and might be involved in repression of a freezing tolerance pathway at warm temperature (PubMed:12615937, PubMed:12747832). Involved in the positive regulation of salt-induced gene expression by maintaining locus-specific acetylation of histones H4 and H3 (PubMed:21193996).
messages: The middle domain of ADA2b is sufficient for interaction with the HAT catalytic domain of GCN5.

3702:AT1G43560
gene id: 3702:AT1G43560
uniprot id: Q8L7S9
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thioredoxin family. Plant Y-type subfamily.
messages: By light in leaves.
messages: Expressed in leaves.
messages: Expression decreases in developing seeds and increases during seed germination.
messages: Thiol-disulfide oxidoreductase that poorly activates chloroplastic malate dehydrogenase (NADP-MDH) and fructose-1,6-bisphosphatase. Provides reducing equivalents for peroxiredoxin Q.
messages: chloroplast stroma

3702:AT1G22930
gene id: 3702:AT1G22930
uniprot id: B3H5L7
uniprot id: O23129
names: Similarity
messages: Belongs to the TCP11 family.

3702:AT3G19220
gene id: 3702:AT3G19220
uniprot id: Q93YN0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino cotyledons but normal green true leaves.
messages: Expressed in roots, rosette and cauline leaves, stems, inflorescences and young siliques of light-grown plants, but not in etiolated seedlings or in senescing tissues.
messages: Homomer. Interacts with LHCB1 proteins, but is not part of the signal recognition particle protein targeting pathway.
messages: Its sequence is related to the DnaJ family but lacks the J domain. The CR-type-like region is similar to CR-type zinc-fingers.
messages: Protein disulfide-isomerase involved in chloroplast development in cotyledons. Involved in the process of vesicle-derived thylakoid formation, probably at the level of the integration and folding of LHCB proteins at the initial location of integration. Acts only in germinating seeds after dormancy, during the transition from heterotrophic to autotrophic growth.
messages: Very low expression in etiolated seedlings, but gradual increase upon illumination with a maximum after 6 hours. Expressed mainly in young plants grown under light conditions.
messages: chloroplast thylakoid membrane

3702:AT5G57130
gene id: 3702:AT5G57130
uniprot id: A0A178UNM9
uniprot id: Q9LU73
names: Caution
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ClpA/ClpB family.
messages: Detected in roots, seedlings and axillary branches.
messages: Interacts probably with TPL/TPR in an EAR-motif dependent manner.
messages: May function in a transcriptional corepressor complex.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G65080
gene id: 3702:AT1G65080
uniprot id: Q8L718
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OXA1/ALB3/YidC (TC 2.A.9.2) family.
messages: Probably required for the insertion of integral membrane proteins into the chloroplast thylakoid membranes.
messages: chloroplast thylakoid membrane

3702:AT3G01590
gene id: 3702:AT3G01590
uniprot id: A0A384KDP9
uniprot id: Q9SS96
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

3702:AT2G02870
gene id: 3702:AT2G02870
uniprot id: Q8L736
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G21050
gene id: 3702:AT5G21050
uniprot id: A0A178UIL3
uniprot id: Q3E983
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Hyccin family.
messages: Cell membrane
messages: Membrane
messages: cytosol

3702:AT2G35940
gene id: 3702:AT2G35940
uniprot id: A0A654F4I7
uniprot id: Q9SJ56
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TALE/BELL homeobox family.
messages: May form heterodimeric complexes with TALE/KNOX proteins KNAT2 and KNAT 5. Interacts with OFP1, OFP2, OFP3, OFP4, OFP5 and OFP15.
messages: Nucleus
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.

3702:AT2G23780
gene id: 3702:AT2G23780
uniprot id: O64824
names: Domain
names: Function
names: Subcellular Location Annotation
messages: E3 ubiquitin-protein ligase.
messages: Endoplasmic reticulum membrane
messages: The RING-type zinc finger domain is responsible for E3 ligase activity.

3702:AT4G26640
gene id: 3702:AT4G26640
uniprot id: A0A1P8B739
uniprot id: A0A1P8B753
uniprot id: A0A654FT11
uniprot id: Q6H942
uniprot id: Q93WV0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group I family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

3702:AT2G41190
gene id: 3702:AT2G41190
uniprot id: O80668
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.5) subfamily.
messages: Membrane

3702:AT2G25295
gene id: 3702:AT2G25295
uniprot id: P82790
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G20550
gene id: 3702:AT3G20550
uniprot id: Q8W4D8
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Delayed growth and reduced fertility. Defective roots, shoots and flowers. Reduced seed set. Reduced levels of primary miRNAs as well as mature miRNAs.
messages: Expressed in roots, lateral roots, vascular strands of roots and leaves, vegetative meristems, pollen and developing seeds.
messages: Interacts with DCL1 (via N-terminus).
messages: Involved in the microRNA (miRNA) and short interfering RNA (siRNA) biogenesis. May facilitate DCL1 to access or recognize primary miRNAs. Binds RNA non-specifically.
messages: Nucleus

3702:AT1G77930
gene id: 3702:AT1G77930
uniprot id: A0A178WJI9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G21990
gene id: 3702:AT3G21990
uniprot id: Q9LRK8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT5G54110
gene id: 3702:AT5G54110
uniprot id: A0A1P8BD09
uniprot id: A0A5S9YDT8
uniprot id: Q1ECE0
names: Function
names: Induction
names: Similarity
messages: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17) family.
messages: By treatment with mannitol.
messages: May play a role in vesicle trafficking.

3702:AT5G63370
gene id: 3702:AT5G63370
uniprot id: A0A1P8BE28
uniprot id: A0A654GDN4
uniprot id: Q9FGW5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aberrant callose deposition, defective pollen wall formation during microspore development, and severely reduced male fertility.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cyclin-dependent kinase involved in pre-mRNA splicing. Required for the correct splicing of the sixth intron of CALS5 pre-mRNA. May stabilize the binding of U1 snRNP to this rare type of intron with a GC 5'SS. Involved in chromosome pairing and is required for the completion of synapsis in male meiocytes at high ambient temperatures.
messages: Expressed in leaves and inflorescences. Lower levels of expression in roots and stems.
messages: Forms a complex with CYCL1-1. Associated with the spliceosome. Interacts with RS2Z33.
messages: Nucleus speckle

3702:AT5G66560
gene id: 3702:AT5G66560
uniprot id: A0A1P8B9C9
uniprot id: A0A1P8B9D2
uniprot id: A0A1P8B9D5
uniprot id: Q94A73
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT1G66750
gene id: 3702:AT1G66750
uniprot id: A0A178WBE6
uniprot id: Q9C9M7
names: Activity Regulation
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by phosphorylation by CDKF-1. Down-regulated by phosphorylation by WEE1.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Cytoplasm
messages: Expressed in suspension cell culture, but not in plant organs.
messages: Forms a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.
messages: Interacts with CYCH1-1. Binding to CYCH1-1 activates CDK kinase.
messages: Nucleus
messages: Phosphorylated by CDKF-1 at Ser-162 and Thr-168. Phosphorylated by WEE1 at Tyr-24. Autophosphorylated.

3702:AT5G09380
gene id: 3702:AT5G09380
uniprot id: A0A1P8BFX0
uniprot id: A0A384KIZ2
uniprot id: F4KCL0
uniprot id: Q9FY77
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G29470
gene id: 3702:AT1G29470
uniprot id: A0A178W7M1
uniprot id: Q6NPR7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G30690
gene id: 3702:AT4G30690
uniprot id: A0A5S9XXB9
uniprot id: F4JQD8
uniprot id: Q94B52
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-3 family.
messages: Chloroplast translation initiation factor that is essential for the coordination of leaf and chloroplast development (PubMed:27535792). IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (By similarity).
messages: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
messages: Monomer.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT1G78850
gene id: 3702:AT1G78850
uniprot id: Q9ZVA4
names: Caution
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
messages: Identified as a cargo protein of vacuolar sorting receptors (PubMed:23738689). This was based on interactions with truncated vacuolar sorting receptors and their co-secretion in the culture medium (PubMed:23738689). This function is however not supported by recent evidences.
messages: May be involved in a cell-to cell programmed cell death (PCD) signaling mechanism.
messages: Phosphorylated on tyrosine.
messages: Up-regulated by fungal elicitor (PubMed:12833529). Up-regulated in both heat- and senescence-induced programmed cell death (PCD) (PubMed:15276441).
messages: cell wall

3702:AT2G26510
gene id: 3702:AT2G26510
uniprot id: A0A1P8B238
uniprot id: F4IUL2
uniprot id: Q8GZD4
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Expressed in gynoecium development, disappearing after pollination.
messages: Expressed in the apical meristem 4 days after imbibition (DAI). Expressed in the major veins of rosette leaves and pedicels. Expressed in the root central cylinder, root meristems, root tips and lateral root primordia.
messages: Membrane

3702:AT5G03340
gene id: 3702:AT5G03340
uniprot id: Q9LZF6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family.
messages: Nucleus
messages: Probably functions in cell division and growth processes. Interacts with certain SNAREs as part of specialized membrane fusion events where vesicles from the same organelle fuse (homotypic fusion) (By similarity).
messages: phragmoplast

3702:AT4G36195
gene id: 3702:AT4G36195
uniprot id: A0A178V4U9
uniprot id: Q683F9
uniprot id: Q94CC6
names: Caution
names: Similarity
messages: Belongs to the peptidase S28 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G19855
gene id: 3702:AT5G19855
uniprot id: Q8L9X2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RbcX family.
messages: Chaperone involved in RuBisCO assembly process.
messages: Homodimer (PubMed:23295968). Interacts with rbcL, atpB and RBCS-1B (PubMed:21922322).
messages: Not regulated by cold, salt or desiccation.
messages: chloroplast stroma

3702:AT4G35260
gene id: 3702:AT4G35260
uniprot id: A0A178UVS2
uniprot id: Q8LFC0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Heterooligomer of catalytic and regulatory subunits.
messages: Mitochondrion
messages: Performs an essential role in the oxidative function of the citric acid cycle.
messages: Ubiquitous. Predominantly expressed in roots, stems and leaves.

3702:AT5G05650
gene id: 3702:AT5G05650
uniprot id: A0A178UD75
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G01870
gene id: 3702:AT5G01870
uniprot id: A0A178UD43
uniprot id: Q9LZV9
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

3702:AT3G49360
gene id: 3702:AT3G49360
uniprot id: A0A5S9XJ83
uniprot id: Q8LG70
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
messages: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
messages: No visible phenotype under normal growth conditions.
messages: cytosol

3702:AT4G13790
gene id: 3702:AT4G13790
uniprot id: A0A178UWH9
uniprot id: Q9SVN4
names: Caution
names: Similarity
messages: Belongs to the ARG7 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G13360
gene id: 3702:AT3G13360
uniprot id: Q94AV5
names: Developmental Stage
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of Ran complexes at least composed of WIT1 or WIT2, RANGAP1 or RANGAP2, and WIP1 or WIP2 or WIP3 (By similarity). Interacts with RANGAP1, WPP1/MAF1, and WPP2/MAF2 (PubMed:17600715). Interacts with SUN1 and SUN2 (PubMed:22270916). Core component of the LINC complex which is composed of inner nuclear membrane SUN domain-containing proteins coupled to outer nuclear membrane WIP and WIT proteins. The LINC complex also involves nucleoskeletal proteins CRWN/LINC and possibly KAKU4 and the cytoskeletal myosin KAKU1 (PubMed:25759303). Interacts with WIT2 (PubMed:25759303).
messages: Expressed in seedlings, roots, stems, leaves, and flowers.
messages: First observed in roots and cotyledons of young developing seedlings. Later confined to root tips and cauline leaves tips. In flowers, detected in the stamens and at the senescence region of developing siliques.
messages: Mediates and enhances the nuclear envelope docking of RANGAP proteins mediated by WIT1 and WIT2 in the undifferentiated cells of root tips (PubMed:17600715). As component of the SUN-WIP-WIT2-KAKU1 complex, mediates the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes (PubMed:25759303).
messages: Nucleus envelope
messages: Nucleus membrane
messages: The KASH domain, which contains a transmembrane domain, mediates the nuclear envelope targeting and is involved in the binding to the SUN proteins.

3702:AT1G27910
gene id: 3702:AT1G27910
uniprot id: Q9C7G1
names: Function
names: Subunit
messages: Binds to SD129.
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G13590
gene id: 3702:AT1G13590
uniprot id: Q9LMY9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phytosulfokine family.
messages: Expressed only in roots.
messages: PSK-beta is produced from PSK-alpha by exopeptidase digestion.
messages: Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
messages: Secreted
messages: Sulfation is important for activity and for the binding to a putative membrane receptor.

3702:AT4G20360
gene id: 3702:AT4G20360
uniprot id: A0A178UY83
uniprot id: P17745
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Interacts with PI5K2 (PubMed:19903693). Interacts with APD2 (PubMed:22897245).
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
messages: chloroplast

3702:AT1G64320
gene id: 3702:AT1G64320
uniprot id: A0A384LAL4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02875
gene id: 3702:AT3G02875
uniprot id: A0A654F537
uniprot id: P54968
names: Cofactor
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the peptidase M20 family.
messages: Expressed in leaves, stems, siliques, seeds and flowers. Detected in central regions of cotyledons, hypocotyl, radicle of mature embryos and seedlings, micropyle of siliques and in pollen.
messages: Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Phe, IAA-Leu and IAA-Tyr (PubMed:7792599, PubMed:10072397, PubMed:11923288). Can also use IAA-Ala, IAA-Gly, IAA-Met and IAA-Glu as substrates with low efficiency (PubMed:7792599, PubMed:10072397, PubMed:11923288). No activity with IAA-Ile, IAA-1-O-beta-D-glucose or IAA-myo-inositol (PubMed:7792599, PubMed:10072397, PubMed:11923288). Is the most efficient enzyme of the ILL family for IAA-Leu hydrolysis (PubMed:11923288). Important for IAA-Leu and IAA-Phe hydrolysis in roots (PubMed:15155875). May act with ILL2 to provide free IAA to germinating seedlings (PubMed:15155875).
messages: Manganese and/or Cobalt or Copper. The ion enhances activity.

3702:AT1G71860
gene id: 3702:AT1G71860
uniprot id: O82656
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt treatment. Down-regulated by cold.
messages: Expressed in roots, stems and flowers, and at low levels in leaves.
messages: Inhibited by hydrogen peroxide.
messages: Interacts with MPK6 (PubMed:19789277). Interacts with KIN10 (PubMed:27029354).
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Phosphorylated by KIN10.
messages: Protein-tyrosine-phosphatase that dephosphorylates and probably inhibits MPK6 in non-oxidative stress conditions. In association with MKP1, represses salicylic acid (SA) and camalexin biosynthesis, thus modulating defense response. May also repress MPK3. Dephosphorylates and inactivates MPK4 in vitro.
messages: cytosol

3702:AT3G54440
gene id: 3702:AT3G54440
uniprot id: A0A384L9U1
uniprot id: A0A5S9XL18
uniprot id: F4JCX0
uniprot id: F4JCX1
uniprot id: Q8RWQ2
names: Caution
names: Similarity
messages: Belongs to the glycosyl hydrolase 2 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G62960
gene id: 3702:AT3G62960
uniprot id: A0A178VEU0
uniprot id: Q9LYC5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).

3702:AT5G27030
gene id: 3702:AT5G27030
uniprot id: Q84JM4
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Nucleus
messages: Tetramer (PubMed:26601214). Interacts with NINJA/AFPH2 (PubMed:20360743). Interacts with SMXL6 (PubMed:22065421). Interacts with SPL (via EAR motif) (PubMed:25527103, PubMed:25378179). Interacts with SPEAR3/TIE1 (PubMed:23444332).
messages: The N-terminal TOPLESS domain (TPD) (1-209) binds directly to a 12-amino acid LxLxL EAR motif peptide.
messages: Transcriptional corepressor. Negative regulator of jasmonate responses (By similarity).

3702:AT1G05620
gene id: 3702:AT1G05620
uniprot id: A0A5S9STJ4
uniprot id: Q8LAC4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates during senescence.
messages: Belongs to the IUNH family.
messages: Component of the NSH heterocomplex made of URH1/NSH1 and URH2/NSH2 which exhibits strong xanthosine nucleosidase activity (PubMed:30787180). Interacts with URH1 (PubMed:30787180).
messages: Expressed in roots, seedlings and flowers.
messages: Involved in pyrimidine breakdown, especially in response to dark stress (PubMed:21599668, PubMed:30787180). In the presence of URH1, exhibits efficient inosine and xanthosine hydrolytic activities (PubMed:21599668, PubMed:30787180). Support inosine breakdown especially during the late phase of senescence (PubMed:21235647).
messages: Normal seedling germination and plant growth and development in standard conditions (PubMed:21599668). No abnormal levels of nucleoside intermediates (PubMed:21599668). The roots of the double mutant urh1 urh2 accumulates strong levels of xanthosine (PubMed:21599668, PubMed:30787180).
messages: cytosol

3702:AT4G25960
gene id: 3702:AT4G25960
uniprot id: Q8LPK2
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Interacts with 1-naphthylphthalamic acid (NPA).
messages: Membrane

3702:AT1G62350
gene id: 3702:AT1G62350
uniprot id: Q1PFH7
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT4G17750
gene id: 3702:AT4G17750
uniprot id: P41151
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HSF family. Class A subfamily.
messages: By heat stress.
messages: Constitutively expressed.
messages: Cytoplasm
messages: Exhibits temperature-dependent phosphorylation (By similarity). Phosphorylated by CRK1.
messages: Homotrimer (PubMed:11807141). Interacts with HSP70-1 and HSP70-4 (PubMed:11807141). Binds to CRK1 (PubMed:18466301). Binds to HSBP (PubMed:20388662, PubMed:20657173).
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motif is a transcriptional activator element.
messages: Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT5G43525
gene id: 3702:AT5G43525
uniprot id: A8MRC6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Expressed in the pistil. Detected exclusively in the synergid cells.
messages: Inactive pollen tube attractants guiding pollen tubes to the ovular micropyle.
messages: Lacks 2 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT4G01840
gene id: 3702:AT4G01840
uniprot id: Q9S6Z8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the two pore domain potassium channel (TC 1.A.1.7) family.
messages: Each of the two pore-forming region (also called P-domain or P-loop) is enclosed by two transmembrane segments (2P/4TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity.
messages: Expressed in hydathodes and the vascular tissues of roots, stems, leaves and flowers.
messages: Homodimer.
messages: Probable voltage-independent potassium-selective tonoplast ion channel.
messages: Vacuole membrane

3702:AT5G02110
gene id: 3702:AT5G02110
uniprot id: Q9LZM0
names: Similarity
messages: Belongs to the cyclin family. Cyclin D subfamily.

3702:AT5G14180
gene id: 3702:AT5G14180
uniprot id: A0A5S9Y4Q0
uniprot id: Q67ZU1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Secreted
messages: Triacylglycerol (TAG) lipase. May be involved for TAG storage breakdown during seed germination (By similarity).

3702:AT5G48430
gene id: 3702:AT5G48430
uniprot id: Q9LV70
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G80080
gene id: 3702:AT1G80080
uniprot id: Q9SSD1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Expressed in the stomatal precursor cells and in immature stomata (PubMed:19513241). Decreases as leaves matured and no expression in fully expanded leaves (PubMed:18979118).
messages: Forms heterodimer with ERECTA or ERL1 through their extracellular domains (PubMed:22241782, PubMed:28536146). Not able to form homodimer (PubMed:22241782). Interacts with EPF2 but not with EPF1 (PubMed:22241782). Interacts with SERK1, SERK2, SERK3/BAK1 and SERK4 (PubMed:26320950). Interacts with EPFL9/STOMAGEN (PubMed:26083750).
messages: In epidermal cells of developing shoots and leaves, but not in roots. Expressed in the stomatal cell lineage in the developing epidermis. Accumulates strongly in meristemoid mother cells (MMC) and meristemoids, somewhat less in meristemoid sister cells (stomatal-lineage ground cells, SLGC), and is barely detected in pavement cells (PubMed:26203655).
messages: Lack of stomata in stem, hypocotyl and on the adaxial side of the sepal. By contrast, cotyledons, anthers and abaxial side of the sepal have excess stomata, with many in direct contact and producing clusters. Altered responses to abscisic acid (ABA) (PubMed:18434605, PubMed:24553751). Enhanced susceptibility to the necrotrophic fungus Plectosphaerella cucumerina BMM (PcBMM) (PubMed:27446127).
messages: Promotes cell fate progression in stomatal development. In leaves, needed to correctly orient spacing divisions, to limit the number of asymmetric divisions in neighbor cells, and to promote the asymmetric (amplifying) divisions of meristemoids. In stems, promotes the conversion of meristemoids into guard mother cells (GMC) (PubMed:11090210, PubMed:12040198, PubMed:18979118). Positively regulates CAPRICE (CPC) expression in differentiating stomaless-forming cell files (PubMed:19513241). Forms constitutive complexes with ERECTA and ERL1 involved in the recognition of the stomatal regulatory peptides EPF1, EPF2 and EPFL9/STOMAGEN (PubMed:28536146). Modulates the activity of the ligand-receptor pairs EPF2-ERECTA and EPF1-ERL1 in stomatal development (PubMed:16002616, PubMed:22241782). Functions in a combinatorial specific manner with the ERECTA-family (ERf) receptor kinases in the regulation of the immune response (PubMed:27446127).
messages: TMM lacks an intracellular kinase domain and may participate in active signal transduction only through physical interaction with other proteins (PubMed:12040198). Overexpression of TMM leads to altered formation of trichomes (PubMed:24553751).
messages: Up-regulated by SPCH-SCRM module.

3702:AT2G05642
gene id: 3702:AT2G05642
uniprot id: F4IHC4
names: Similarity
messages: Belongs to the replication factor A protein 1 family.

3702:AT3G20760
gene id: 3702:AT3G20760
uniprot id: A0A178VC92
uniprot id: F4JET1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NSE4 family.
messages: Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
messages: Component of the SMC5-SMC6 complex.
messages: Interacts with SMC5, SMC6A or SMC6B. The SMC5-SMC6 complex is composed of the SMC5 and SMC6 heterodimer attached via their hinge domain and from the non-SMC subunit NSE4A or NSE4B (By similarity).
messages: Not expressed in seedlings, rosette leaves and floral buds.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G09010
gene id: 3702:AT4G09010
uniprot id: A0A1P8B8W6
uniprot id: A0A1P8B8Y3
uniprot id: A0A5S9XSG0
uniprot id: P82281
names: Caution
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family.
messages: Down-regulated during leaf senescence.
messages: Was originally thought to be an ascorbate peroxidase (PubMed:12068123, PubMed:16034597). PubMed:19828564 fails to show any peroxidase activity associated with TL29 and demonstrates that TL29 could bind neither heme nor ascorbate. TL29 lacks the heme-binding site, the proton acceptor and the transition state stabilizer, which are conserved features of the ascorbate peroxidase.
messages: chloroplast thylakoid lumen

3702:AT5G67260
gene id: 3702:AT5G67260
uniprot id: A0A1P8BEM5
uniprot id: A0A654GEV1
uniprot id: Q9FGQ7
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin D subfamily.
messages: Expressed in developing vegetative and floral primordia.
messages: Interacts with CDKA-1.
messages: Promotes divisions in the guard cells (GCs) after the guard mother cells (GMC) symmetric division when in the presence of CDKA-1.

3702:AT2G04940
gene id: 3702:AT2G04940
uniprot id: A0A654EWZ5
uniprot id: Q9SI32
names: Similarity
messages: Belongs to the phospholipid scramblase family.

3702:AT1G22860
gene id: 3702:AT1G22860
uniprot id: F4I312
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP1 family.
messages: Component of the class C core vacuole/endosome tethering (CORVET) complex. Their common core is composed of the class C Vps core proteins VPS11, VCL1, VPS18 and VPS33, which in CORVET further associates with VPS3 (PubMed:29463724). Interacts directly with VPS11. Binds to RABF2A and RABF2B (PubMed:29463724).
messages: Cytoplasm
messages: Embryonic lethality (PubMed:29463724). Heterozygous mutants produce some yellowish seeds with developmentally retarded or abnormally shaped embryos. Conditional dexamethasone (DEX)-inducible mutants exhibit abnormal root morphology (PubMed:29463724).
messages: Endosome membrane
messages: Essential protein required during embryogenesis. Believed to act as a component of the putative class C core vacuole/endosome tethering (CORVET) endosomal tethering complexes. CORVET is required for vacuolar transport of SYP22. Involved in root development (PubMed:29463724). Plays a role in vesicle-mediated protein trafficking of the endocytic membrane transport pathway (By similarity).

3702:AT2G38720
gene id: 3702:AT2G38720
uniprot id: Q9ZVJ3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MAP65/ASE1 family.
messages: Cytoplasm
messages: Expressed throughout the cell cycle.
messages: Forms a dimer (By similarity). Binds to MT, mostly with coaligned MT, both between parallel or antiparallel, forming thick bundles. Bundles polymerized MT via the formation of 25-nm crossbridges with cortical MT.
messages: Microtubule-associated protein that bundle and stabilize adjacent microtubules (MT) of the cell cortex. Confers MT resistance to the drug oryzalin. Promotes the formation of a planar network of antiparallel microtubules.
messages: Nucleus
messages: cell cortex
messages: phragmoplast
messages: plasmodesma
messages: spindle

3702:AT5G51860
gene id: 3702:AT5G51860
uniprot id: Q9FLH5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Expressed in the shoot apical meristem (SAM) during the vegetative phase and the floral transition. After floral transition, expressed in apical meristem (AM), inflorescence meristem (IM) and floral primordia.
messages: MADS-box transcription factor that acts with AGL42 and AGL71 in the control of flowering time. Promotes flowering at the shoot apical and axillary meristems. Seems to act through a gibberellin-dependent pathway. Interacts genetically with SOC1 and its expression is directly regulated by SOC1.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT4G13610
gene id: 3702:AT4G13610
uniprot id: Q9T0I1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
messages: Endosperm development arrested.
messages: Maintains chromatin CpG methylation that plays a role in genomic imprinting, regulation of embryogenesis and seed viability. Required for proper patterns of CG DNA methylation in dividing cells (By similarity). Required during the endosperm development in seeds.
messages: Nucleus

3702:AT3G18200
gene id: 3702:AT3G18200
uniprot id: Q9LV20
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT5G36180
gene id: 3702:AT5G36180
uniprot id: A0A178UJB4
uniprot id: A0A1P8BEM4
uniprot id: A0A1P8BEN8
uniprot id: A0A1P8BEP6
uniprot id: Q8RWJ6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings and roots.
messages: Probable carboxypeptidase.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G24330
gene id: 3702:AT3G24330
uniprot id: Q9LK11
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT1G10880
gene id: 3702:AT1G10880
uniprot id: A0A5S9TRG3
uniprot id: Q0WR07
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G23230
gene id: 3702:AT3G23230
uniprot id: A0A654F9Y2
uniprot id: Q9LTC5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Interacts with MED25.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G11900
gene id: 3702:AT3G11900
uniprot id: Q9SF09
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.8) subfamily.
messages: Endoplasmic reticulum membrane
messages: Sequencing errors.
messages: Translocates aromatic and neutral amino acids such as tyrosine, tryptophan, phenylalanine, histidine, proline, leucine, valine, glutamine, as well as arginine. Transports the auxins indole-3-acetic acid (IAA) and 2,4-dichlorophenoxyacetic acid (2,4-D).
messages: Ubiquitous (PubMed:27925655). Highly expressed in flowers and cauline leaves and at lower levels in stems, leaves and roots (PubMed:11299361).

3702:AT5G61810
gene id: 3702:AT5G61810
uniprot id: A0A178UGX9
uniprot id: F4K509
uniprot id: Q9FLS8
names: Activity Regulation
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: By stress conditions.
messages: Calcium-dependent mitochondrial carrier protein that catalyzes the import of ATP co-transported with metal divalent cations across the mitochondrial inner membrane in exchange for phosphate (Pi) (PubMed:22062157, PubMed:28695448, PubMed:26140942, PubMed:26444389). Can transport phosphate, AMP, ADP, ATP, adenosine 5'-phosphosulfate and, to a lesser extent, other nucleotides (PubMed:26140942, PubMed:26444389). Binds calcium ions Ca(2+) (PubMed:22062157). Mediates also calcium uptake (By similarity).
messages: Counter-exchange transport activity is saturable and inhibited by pyridoxal-5'-phosphate, EDTA and EGTA (PubMed:26140942). Activated by calcium Ca(2+) and manganese Mn(2+) ions, and slightly by iron Fe(2+) and zinc Zn(2+) ions (PubMed:26140942, PubMed:28695448). Repressed by copper ions Cu(2+) and slightly by magnesium Mg(2+) ions (PubMed:28695448). Magnesium Mg(2+) ions promotes slightly ATP uptake, ATP-Mg(2+) being exchanged with ATP(4-) (PubMed:26444389).
messages: Expressed at high levels in flowers, leaves, stems, roots and seedlings, mostly in flowers.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Slightly expressed in vascular tissues, in leaves of both seedlings and mature plants, stamen filaments and developing siliques.
messages: The N-terminal domain can bind calcium.

3702:AT2G43510
gene id: 3702:AT2G43510
uniprot id: A0A178VRC4
uniprot id: Q42328
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family. Protease inhibitor I18 (RTI/MTI-2) subfamily.
messages: Secreted
messages: Was thought to be a protease inhibitor (Ref.1, PubMed:15082560, PubMed:12369816).

3702:AT1G12350
gene id: 3702:AT1G12350
uniprot id: A0A5S9U0A8
uniprot id: Q8GXR5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PPC synthetase family.
messages: Catalyzes the first step in the biosynthesis of coenzyme A from vitamin B5/pantothenate, where cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine (PubMed:12860978). The catalytic activity is not CTP- but ATP-dependent (PubMed:12860978).
messages: Homodimer.

3702:AT2G24590
gene id: 3702:AT2G24590
uniprot id: A0A178VTR9
uniprot id: Q9SJA6
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family. RSZ subfamily.
messages: Component of the spliceosome.
messages: Extensively phosphorylated on serine residues in the RS domain.
messages: Nucleus
messages: Probably involved in intron recognition and spliceosome assembly.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G30080
gene id: 3702:AT4G30080
uniprot id: Q93YR9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT4G22485
gene id: 3702:AT4G22485
uniprot id: A8MRQ5
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT4G03100
gene id: 3702:AT4G03100
uniprot id: F4JI46
names: Function
names: Subunit
messages: Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state.
messages: Homodimerizes via its Rho-GAP domain and forms a tetrameric complex (2:2) with ARAC1/ROP3, ARAC2/ROP7, ARAC4/ROP2, ARAC5/ROP4, ARAC7/ROP9 or ARAC11/ROP1.

3702:AT3G02260
gene id: 3702:AT3G02260
uniprot id: A0A1I9LSK3
uniprot id: A0A1I9LSK4
uniprot id: A0A1I9LSK5
uniprot id: Q9SRU2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Altered expression of light-regulated genes; overexpression of CAB (photosystem II type I chlorophyll a/b-binding proteins) genes in the dark (e.g. CAB1 and CAB3). Reduced auxin transport. Under long-day growth conditions (18 hr light/6 hr dark), reduced apical dominance in mature plants. Reduced plant growth under both short-day (9 hr light/15 hr dark) and long-day conditions resulting in shorter plants. Strong deficiency in lateral root production. Reduced cell elongation in siliques, pedicels, roots, and the inflorescence leading to a compact rosette, more secondary corymb-like inflorescence, and small seeds. Delayed flowering. Reduced sensitivity to auxin transport inhibitors N-1-naphthylphthalamic acid (NPA), 2-carboxyphenyl-3-phenylpropane-l,2-dione (CPD), and methyl-2-chloro-9-hydroxyfluorene-9-carboxylate (CFM). Organ-specific defect in response to cytokinins, ethylene and gibberellic acid (GA). Increased expression of auxin transporters PIN1 and PIN6. Reduced growth-promotion and lateral root development stimulation mediated by the fungus T.virens.
messages: Belongs to the UBR4 family.
messages: Constitutively expressed in roots, rosette leaves, inflorescence stems, and flowers. Present in inflorescence meristems, floral meristems and vascular tissues.
messages: May be or regulate a N-1-naphthylphthalamic acid (NPA) binding protein (NBP), an auxin transport inhibitor.
messages: Membrane
messages: Required for auxin efflux and polar auxin transport (PAT) influencing auxin-mediated developmental responses (e.g. cell elongation, apical dominance, lateral root production, inflorescence architecture, general growth and development). Controls the elongation of the pedicels and stem internodes through auxin action. Involved in the expression modulation of light-regulated genes. Represses CAB1 and CAB3 genes expression in etiolated seedlings. Confers sensitivity to the auxin transport inhibitors N-1-naphthylphthalamic acid (NPA), 2-carboxyphenyl-3-phenylpropane-l,2-dione (CPD), and methyl-2-chloro-9-hydroxyfluorene-9-carboxylate (CFM). Influences the polarized subcellular distribution of the auxin transporter PIN1 in response to auxin transport inhibitors. Plays a role in the regulation of responses to phytohormones such as auxin, cytokinins, ethylene and gibberellic acid (GA), particularly during light-mediated stimuli (e.g. shade ovoidance, etiolation). Required for pericycle cell activation to form lateral root primordia (LRP) in both high and low phosphate P conditions. Necessary for the plant-growth promotion and lateral root development mediated by the fungus Trichoderma virens.

3702:AT5G25754
gene id: 3702:AT5G25754
uniprot id: A0A178U9L8
uniprot id: F4JY76
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit L family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3702:AT4G02670
gene id: 3702:AT4G02670
uniprot id: O22759
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.

3702:AT1G63850
gene id: 3702:AT1G63850
uniprot id: A0A178W5W9
uniprot id: Q9CAJ9
names: Domain
names: Function
names: Sequence Caution
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Wrong choice of frame.

3702:AT2G40650
gene id: 3702:AT2G40650
uniprot id: A0A178VVG9
uniprot id: Q8LB54
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PRP38 family.
messages: Interacts with SR45A.
messages: Nucleus
messages: Probably required for the first pre-mRNA cleavage reaction catalyzed by the spliceosome.
messages: Required for pre-mRNA splicing.

3702:AT1G37130
gene id: 3702:AT1G37130
uniprot id: A0A654EGF1
uniprot id: P11035
uniprot id: Q0WLH2
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the nitrate reductase family.
messages: Binds 1 FAD per subunit.
messages: Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.
messages: Binds 1 heme group per subunit.
messages: Homodimer.
messages: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
messages: Root, leaf, and shoot.
messages: When mutated confers resistance to the herbicide chlorate.

3702:AT1G27070
gene id: 3702:AT1G27070
uniprot id: Q9LFY0
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Contains a C-terminal (456-532) carbohydrate-binding domain (CBM).
messages: Interacts with PTST3 and SS4.
messages: Involved in starch granule initiation in leaf chloroplasts. Binds and delivers suitable maltooligosaccharide substrates to starch synthase 4 (SS4).
messages: No visible phenotype under normal growth conditions, but leaf chloroplasts exhibit reduced number of starch granules.
messages: chloroplast

3702:AT3G17712
gene id: 3702:AT3G17712
uniprot id: F4J6D7
uniprot id: F4J6D8
uniprot id: F4J6D9
names: Similarity
messages: Belongs to the NRDE2 family.

3702:AT3G54730
gene id: 3702:AT3G54730
uniprot id: P0DKG2
uniprot id: P0DKG3
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: Membrane
messages: Nucleus
messages: Plants over-expressing OFP9 have no visible phenotype.
messages: Probable transcriptional repressor that may regulate multiple aspects of plant growth and development.

3702:AT5G41280
gene id: 3702:AT5G41280
uniprot id: Q9FHD5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Membrane

3702:AT1G65790
gene id: 3702:AT1G65790
uniprot id: A0A1P8AQZ9
uniprot id: Q39086
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated on serine and threonine residues.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By wounding and Xanthomonas campestris pv. campestris.
messages: Cell membrane
messages: Interacts with PUB9, PUB13, PUB14 and PUB38.
messages: Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.
messages: Mostly expressed in leaves, and, to a lower extent, in stems and flower buds.
messages: Receptor domain alone.
messages: Reduced abscisic acid (ABA) sensitivity during seed germination.

3702:AT2G45980
gene id: 3702:AT2G45980
uniprot id: O82775
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: By salt stress.
messages: Endoplasmic reticulum membrane
messages: Interacts with ATG8F (PubMed:22253227, PubMed:22580699). Interacts with ATG8H (PubMed:22580699). Interacts with APE1 and PSBS/NPQ4 (PubMed:25281689).
messages: Involved in a special stress-induced plastid-to-vacuole protein trafficking pathway. Interacts with ATG8F in plastid bodies to subsequently enable their delivery to the vacuole by an autophagic pathway. Interacts with the plastid proteins APE1 and PSBS/NPQ4 and may recruit them as cargo into plastid bodies that may be recognized by the autophagy machinery for degradation in the vacuole. Involved in the alleviation of damage caused by salt stress during plant development, probably through its involvement in plastid-to-vacuole and ER-to-vacuole trafficking (PubMed:25281689). Plays a role in seed germination in response to exogenous abscisic acid (ABA) treatment (PubMed:22253227).
messages: Membrane
messages: Plants over-expressing ATI1 display increased ability of seed germination in presence of exogenous abscisic acid (ABA). Plants silencing ATI1 and ATI2 display decreased ability of seed germination in presence of exogenous ABA.
messages: chloroplast membrane

3702:AT1G53670
gene id: 3702:AT1G53670
uniprot id: Q9C8M2
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit.
messages: By photooxidative stress.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Specifically reduces the MetSO R-enantiomer. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. May play an essential function in association with MSRB2 in maintaining vegetative growth during environmental constraints, through the preservation of photosynthetic antennae. MSRB1 and MSRB2 account for most of the leaf peptide MSR capacity.
messages: Expressed at low levels in stems, leaves, floral buds, flowers and siliques (at protein level).
messages: Lacks the conserved cysteine (here Thr-132) required for the reduction by thioredoxins (TRX) through a dithiol-disulfide exchange involving both redox-active Cys of TRX and MSRB. Reduced by thioredoxin CDSP32 which regenerates MSRB1 through the direct reduction of the sulfenic acid formed on the catalytic Cys, without the help of any other thiol compound. Also reduced by the glutahione/glutaredoxin (GSH/GRX) system via a glutathionylation step of the sulfenic acid and then by GRX reduction of the GSH-MSR adduct.
messages: chloroplast

3702:AT1G78620
gene id: 3702:AT1G78620
uniprot id: A0A178W477
uniprot id: F4IBS8
uniprot id: Q9SYM0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM19 family.
messages: Lethal when homozygous. Tocopherol-deficient plants are unable to grow photoautotrophically and infertile. Vte5 and vte6 double mutants can grow photoautotrophically and display a stay-green phenotype with strongly delayed senescence and an extended lifetime.
messages: Membrane
messages: Overexpression of VTE6 results in increased phytyl-PP and tocopherol levels in seeds.
messages: Phytyl-phosphate kinase catalyzing the conversion of phytyl-monophosphate to phytyl-diphosphate (PubMed:26452599). Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol (vitamin E) biosynthesis (PubMed:26452599). Involved in the biosynthesis of phylloquinone (vitamin K), which is required for the photosystem I (PSI) complex stability (PubMed:28007557).
messages: chloroplast membrane

3702:AT1G09630
gene id: 3702:AT1G09630
uniprot id: O04486
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Endosome membrane
messages: Expressed in root tips.
messages: Intracellular vesicle trafficking and protein transport.
messages: trans-Golgi network membrane

3702:AT2G39810
gene id: 3702:AT2G39810
uniprot id: Q84JU6
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of the transcription factor ICE1. Acts as a negative regulator of cold signaling pathways (PubMed:16702557). Probably involved in recruiting the NUP107-160 subcomplex of the nuclear pore complex to chromatin (Probable). Controls flowering time in response to ambient temperatures (16 and 23 degrees Celsius) and intermittent cold, probably via the regulation of FT and TSF levels (PubMed:22960247).
messages: Early flowering, and insensitivity to ambient temperature and to intermittent cold, but normal responses to vernalization and gibberellic acid.
messages: Interacts with SCRM/ICE1, FLK and MSI4/FVE.
messages: Loss-of-function mutation (hos1) in the gene shows an early flowering phenotype due to a constitutive vernalization and a reduced freezing tolerance without cold acclimation.
messages: Nucleus
messages: Rapid and transient reduction of expression in response to brief cold treatment. After recovery, the level is maintained until 2 days after cold treatment, before declining again.
messages: The C-terminal part of HOS1 is involved in the interaction with ICE1.
messages: The RING domain is required for E3 ubiquitin ligase activity.
messages: Ubiquitously expressed with higher levels in leaf vasculature, roots and root tips.

3702:AT1G07930
gene id: 3702:AT1G07930
uniprot id: A0A178WJC9
uniprot id: F4HUA0
uniprot id: P0DH99
uniprot id: Q0WL56
uniprot id: Q8GTY0
uniprot id: Q8W4H7
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Interacts with ATX1 isoform 3 in the cytoplasm on the nuclear periphery.
messages: There are four genes for EF-1-alpha in Arabidopsis thaliana. The sequence of genes 1, 2, and 3 are identical.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
messages: Trimethylated on Lys-396 by ATX1 isoform 3.
messages: perinuclear region

3702:AT1G60690
gene id: 3702:AT1G60690
uniprot id: O22707
names: Similarity
messages: Belongs to the aldo/keto reductase family.

3702:AT2G37060
gene id: 3702:AT2G37060
uniprot id: A0A5S9X4P4
uniprot id: Q8VYK4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
messages: Expressed in flowers and mature rosettes.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Nucleus

3702:AT1G54580
gene id: 3702:AT1G54580
uniprot id: A0A7G2E3Y3
uniprot id: P25701
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group (By similarity).
messages: Belongs to the acyl carrier protein (ACP) family.
messages: By sucrose in the dark. Down-regulated by starvation.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: chloroplast

3702:AT2G32080
gene id: 3702:AT2G32080
uniprot id: A0A178VVW2
uniprot id: A0A178VXA3
uniprot id: Q9SKZ1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PUR DNA-binding protein family.
messages: Homodimer. Interacts with TCP20.
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: Transcription factor that specifically binds the purine-rich double-stranded telomeric repeated sequence 5'-AAACCCTAA-3' found in promoter telo boxes.

3702:AT3G13600
gene id: 3702:AT3G13600
uniprot id: A0A178VF87
uniprot id: Q9LHN9
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By light. Down-regulated by treatment with mannitol.
messages: Cytoplasm
messages: Expressed in rosette and cauline leaves, stems, flowers and siliques, and at lower levels in roots.
messages: Long hypocotyl phenotype.
messages: May be involved in biotic and abiotic stress responses.
messages: Nucleus

3702:AT3G09600
gene id: 3702:AT3G09600
uniprot id: Q8RWU3
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
messages: Circadian-regulation. Peak of expression in the afternoon. Down-regulated by cold.
messages: Delay and reduction in levels of evening-phased clock gene transcripts and long circadian period.
messages: Nucleus
messages: Subject to temperature associated alternative splicing producing mainly non-productive mRNAs.
messages: Transcriptional activator of evening element (EE)-containing clock-controlled genes. Forms a negative feedback loop with APRR5. Regulates the pattern of histone H3 acetylation of the TOC1 promoter.

3702:AT3G42830
gene id: 3702:AT3G42830
uniprot id: Q9M2B0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RING-box family.
messages: Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The SCF complex plays a crucial role in regulating response to auxin and is essential for growth and development. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme, to the complex and brings it into close proximity to the substrate (By similarity).
messages: Cytoplasm
messages: Not detected in floral buds, stems and roots.
messages: Nucleus
messages: Part of SCF complexes, which consist of a SKP1-related protein, a cullin, a RBX protein and a F-box protein.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity. It coordinates an additional third zinc ion.

3702:AT5G11490
gene id: 3702:AT5G11490
uniprot id: A0A1P8BB38
uniprot id: F4JXV9
uniprot id: Q9LDK9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complexes are heterotetramers composed of two large adaptins (beta-type subunit and alpha-type or delta-type or epsilon-type or gamma-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit) (By similarity). Interacts with AHK2.
messages: Adaptor protein complexes are heterotetramers composed of two large adaptins (beta-type subunit and alpha-type or delta-type or epsilon-type or gamma-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes large subunit family.
messages: Golgi apparatus
messages: Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity).
messages: Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
messages: clathrin-coated vesicle membrane
messages: trans-Golgi network

3702:AT3G44460
gene id: 3702:AT3G44460
uniprot id: Q8RYD6
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family. ABI5 subfamily.
messages: Could participate in abscisic acid-regulated gene expression during seed development.
messages: DNA-binding heterodimer with AREB3/DPBF3 or EEL/DPBF4. Interacts with the AFP proteins AFP1, AFP2 and AFP3.
messages: Expressed in embryo during the latest stages of seed maturation.
messages: Nucleus
messages: Predominantly expressed in seeds.

3702:AT2G23320
gene id: 3702:AT2G23320
uniprot id: A0A178VVT3
uniprot id: F4ILJ1
uniprot id: O22176
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-d family.
messages: By salicylic acid.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT1G25425
gene id: 3702:AT1G25425
uniprot id: Q6IWB1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Expressed at low levels in seedlings.
messages: Extracellular signal peptide that regulates cell fate (By similarity). Promotes pollen tube growth prolongation in a SKM1 and SKM2-dependent manner, especially under relatively high temperature (at 30 degrees Celsius), thus conferring tolerance against high temperature probably through the maintenance of mitochondrial activity (PubMed:23910659).
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-91 enhances binding affinity of the CLE43p peptide for its receptor.
messages: extracellular space

3702:AT3G61070
gene id: 3702:AT3G61070
uniprot id: A0A178VG67
uniprot id: Q84JW1
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-11 family.
messages: Can complement the yeast pex11 null mutant.
messages: Expressed in leaves and developing siliques.
messages: Homooligomer. Interacts with ARC5 and FIS1B on peroxisomes.
messages: Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.
messages: Peroxisome membrane
messages: Up-regulated during sensecence. Down-regulated in seedlings by transition from dark to light.

3702:AT2G40970
gene id: 3702:AT2G40970
uniprot id: O22210
names: Biotechnology
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots, leaves, stems, petioles, filaments, stigma, pedicels, sepals, anthers, petals, and siliques.
messages: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold.
messages: No visible phenotype under normal growth conditions, but mutant plants show increased tolerance to freezing.
messages: Nucleus
messages: Probable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway.
messages: Repression of MYBC1/MTF1 promotes Arabidopsis plant transformation by Agrobacterium tumefaciens.

3702:AT4G39180
gene id: 3702:AT4G39180
uniprot id: F4JVA9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Required for transport of secretory proteins from the Golgi complex (By similarity). Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

3702:AT5G54790
gene id: 3702:AT5G54790
uniprot id: Q5BPG5
names: Function
names: Miscellaneous
messages: Involved in the regulation of plant growth.
messages: Plants overexpressing VUP4 exhibit severe dwarfism.

3702:AT5G43730
gene id: 3702:AT5G43730
uniprot id: Q9FG91
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT5G67030
gene id: 3702:AT5G67030
uniprot id: Q9FGC7
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Sequence Caution
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By ABA and drought, salt and osmotic stresses.
messages: Expressed in leaves, stems and flowers, and at lower levels in roots and siliques.
messages: Increased endogenous level of zeaxanthin and reduced level of ABA. Reduced size of leaves, inflorescences and flowers, early flowering, increased number of wilted plants, premature seed germination and reduced osmotic water permeability and ability to close stomata. Reduced susceptibility to virulent isolates of P.parasitica and sensitivity to BABA-induced priming.
messages: Intron retention.
messages: Plants overexpressing ZEP show increased levels of violaxanthin and ABA and increased tolerance to salt and drought stresses.
messages: Zeaxanthin epoxidase that plays an important role in the xanthophyll cycle and abscisic acid (ABA) biosynthesis. Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Required for resistance to osmotic and drought stresses, ABA-dependent stomatal closure, seed development and dormancy, modulation of defense gene expression and disease resistance and non-photochemical quencing (NPQ). Through its role in ABA biosynthesis, regulates the expression of stress-responsive genes such as RD29A during osmotic stress and is required for normal plant growth during vegetative development. Is required for late skotomorphogenic growth through its role in the xanthophyll carotenoids neoxanthin, violaxanthin and antheraxanthin biosynthesis. Required for beta-aminobutyric acid (BABA)-induced priming in disease resistance, tolerance to salt and drought stresses and sterility. Participates in NPQ by regulating the level of zeaxanthin in photosynthetic energy conversion. NPQ is a process that maintains the balance between dissipation and utilization of light energy to minimize the generation of oxidizing molecules and the molecular damages they can generate.
messages: chloroplast

3702:AT2G45380
gene id: 3702:AT2G45380
uniprot id: A0A1P8B278
uniprot id: C0Z2Z6
uniprot id: F4IG49
uniprot id: F4IG50
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLF family.
messages: Cytoplasm

3702:AT1G16540
gene id: 3702:AT1G16540
uniprot id: A0A1P8AVE2
uniprot id: A0A1P8AVG9
uniprot id: Q9C5X8
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. MOCOS subfamily.
messages: Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
messages: Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. Modulates cold stress- and osmotic stress-responsive gene expression by acting as key regulator of abscisic acid (ABA) biosynthesis.
messages: Ubiquitously expressed.
messages: Up-regulated in response to drought, salt or ABA treatment.

3702:AT3G25950
gene id: 3702:AT3G25950
uniprot id: A0A384K9C5
uniprot id: Q6DR02
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G61250
gene id: 3702:AT3G61250
uniprot id: Q9M2D9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in cotyledon and hypocotyls of germinating seeds.
messages: Expressed in the shoot apex, young flower buds, developing carpels and siliques (PubMed:19232308). Expressed in floral meristem, initiating floral primordia and developing flowers (PubMed:21750030).
messages: Interacts with LFY.
messages: Meristem identity phenotype; increased number of cauline leaves and secondary inflorescences.
messages: Nucleus
messages: Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030).

3702:AT2G43180
gene id: 3702:AT2G43180
uniprot id: A0A178VQJ4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G37630
gene id: 3702:AT4G37630
uniprot id: A0A178UUR3
uniprot id: A0A2H1ZEQ4
uniprot id: A0A384K8C1
uniprot id: A0A5S9XZI1
uniprot id: Q2V3B2
names: Caution
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin D subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G44710
gene id: 3702:AT5G44710
uniprot id: A0A178UN57
uniprot id: Q8GXH5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mS33 family.
messages: Mitochondrion

3702:AT4G04850
gene id: 3702:AT4G04850
uniprot id: Q9M0Z3
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. KEA (TC 2.A.37.1) subfamily.
messages: Electroneutral K(+)/H(+) efflux antiporter assuring proton efflux from the thylakoid lumen to the plastid stroma, thus increasing the membrane potential at the expense of the proton gradient (delta pH) component of the proton motive force (PMF) (PubMed:25451040, PubMed:24278440, PubMed:27783435, PubMed:31053658, PubMed:31427465, PubMed:31296940). Promotes photosynthesis and growth in conditions where the chloroplast (cp)ATP synthase activity is low (e.g. cgl160 mutant background) by reducing the pH gradient across the thylakoid membrane (PubMed:32041909). Accelerates photosynthetic acclimation in fluctuating light environments by modulating two components of the proton motive force, the proton gradient and the electric potential (delta Psi) (PubMed:27335350, PubMed:25451040, PubMed:27783435, PubMed:31053658, PubMed:31427465). Promotes the relaxation of photoprotective energy-dependent non-photochemical quenching (NPQ) after transitions from high to low light, thus enhancing photosystem II (PSII) quantum efficiency in fluctuating light (PubMed:27335350). On transition from high to low light, slows down photoprotection by dissipating the pH gradient across the thylakoid membrane (PubMed:31201341). During photosynthetic response on transition from dark to low light, involved in a sequential mechanism of adaptation; VCCN1 and CLCe first trigger the activation of photoprotection, which is later down-regulated by KEA3 to a low steady state, while adjusting electron transport (PubMed:31201341). Together with the chloroplast NADH dehydrogenase-like (NDH) complex, maximizes photosynthesis efficiency after a long dark adaptation (PubMed:32978277). Required in roots for rapid hyperosmotic-induced Ca(2+) responses and for osmo-sensory potentiation in hyperosmotic conditions (PubMed:27528686).
messages: Expressed at low levels in flowers and leaves.
messages: Expressed at low levels in flowers, siliques and leaves.
messages: Expressed in shoots and roots.
messages: Golgi apparatus membrane
messages: Low K(+)/H(+) efflux antiporter activity (PubMed:31296940). Promotes non-photochemical quenching (NPQ) in high light conditions (PubMed:27335350).
messages: Low K(+)/H(+) efflux antiporter activity.
messages: Most abundant splice form in all organs, including siliques, flowers, leaves and roots (PubMed:27335350). Preferentially expressed in photosynthetically active tissues, including seedling cotyledons and mature leaves (PubMed:31053658).
messages: No visible phenotype (PubMed:25451040, PubMed:24794527, PubMed:31201341). Impaired rapid hyperosmotic-induced Ca(2+) responses in kea3 (PubMed:27528686, PubMed:25451040). Altered non-photochemical quenching (NPQ) and photosystem II (PSII) quantum efficiency after transitions from high to low light leading to a reduced growth rate (PubMed:27335350, PubMed:31053658, PubMed:31427465). Transiently increased NPQ upon transition from dark to low light (PubMed:31201341). Slightly faster NPQ induction on transition from low to high light (PubMed:31201341). Delayed NPQ relax on transition from high to low light (PubMed:31201341). In contrast to dpgr, the mutant kea3 has a high-NPQ phenotype during steady state in ambient air (PubMed:27783435). The kea3 pgr5 double mutant combines the phenotypes of the single mutants in NPQ induction upon overnight dark adaptation (PubMed:32978277). The double mutant crr2 kea3 enhances the kea3 single mutant phenotypes, and delays induction of CO(2) fixation after overnight dark adaptation (PubMed:32978277). Triple mutants kea1 kea2 kea3 are extremely stunted in size with entirely pale leaves and died before steeing seeds (PubMed:24794527). Lower photosynthetic performance in dark-adapted clce kea3 double mutant, as well as in the clce kea3 vccn1 triple mutant (PubMed:31201341). Altered NPQ upon transition from dark to low light in clce kea3 and kea3 vccn1 double mutants and in the clce kea3 vccn1 triple mutant (PubMed:31201341). Strong growth penalty in the cgl160 kea3 double mutant associated with a low lumenal pH leading to a reduced photosynthetic capacity (PubMed:32041909).
messages: Regulated by a mechanism involving lumenal C-terminus region; a fine-tuned balance between photoprotective energy dissipation in high light and a maximum quantum yield in low light involves a reduced activity under high light.
messages: Topology may be in opposite way (PubMed:27335350).
messages: Up-regulated by low K(+) stress.
messages: chloroplast membrane
messages: chloroplast thylakoid membrane

3702:AT1G51770
gene id: 3702:AT1G51770
uniprot id: A0A178WGY9
uniprot id: Q1G2Z9
uniprot id: Q1G300
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G46550
gene id: 3702:AT3G46550
uniprot id: A0A5S9XK06
uniprot id: Q9SNC3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: Expressed in all plant organs and tissues, including guard cells in the leaf.
messages: May be a cell surface adhesion protein that is required for normal cell expansion.
messages: Membrane
messages: Up-regulated by abscisic acid, cold and drought treatments, but not by high salt.

3702:AT2G20140
gene id: 3702:AT2G20140
uniprot id: A0A178VM16
uniprot id: Q9SL67
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AAA ATPase family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: No visible phenotype under normal growth conditions (PubMed:22158466). The double mutants rpt2a and rpt2b are blocked in both male and female gametogenesis (PubMed:22158466, PubMed:21784786).
messages: Nucleus
messages: Preferentially expressed in the root and shoot apical meristem.
messages: The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (PubMed:22158466). Acts redundantly with RPT2A in the regulation of gametogenesis (PubMed:21784786, PubMed:22158466). With RPT2A plays a critical role in 26S proteasome assembly (PubMed:22158466).

3702:AT4G15165
gene id: 3702:AT4G15165
uniprot id: A0A654FPL0
uniprot id: F4JJE5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity).
messages: Was not identified as subunit of the 26S proteasome complex (PubMed:20516081). Could be the product of a pseudogene.

3702:AT2G23985
gene id: 3702:AT2G23985
uniprot id: A0A384LC87
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G32800
gene id: 3702:AT2G32800
uniprot id: O48837
names: Induction
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Rapidly induced after both compatible and incompatible pathogen inoculations (e.g. Xanthomonas campestris pv. campestris and Pseudomonas syringae pv. tomato). Weakly and transiently induced in response to wounding, salicylic acid (SA) and jasmonic acid (JA).

3702:AT2G25650
gene id: 3702:AT2G25650
uniprot id: Q8VYD2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GeBP family.
messages: Expressed in the apical meristem and young leaf primordia. Detected in the vascular tissues of cotyledons and leaves, in hydathodes and at the base of flowers and siliques, but not in roots.
messages: Homo- and heterodimers. Interacts with GEBP, GPL2 and GPL3. Interacts with GEBP (PubMed:29192025).
messages: Nucleus
messages: Probable transcription factor. May play redundant roles with GEBP and GPL2 in cytokinin responses by regulating the transcript levels of type-A ARR response genes (PubMed:18162594). Involved in stress responses (PubMed:21875893). Plays a repressive role in cell expansion by counteracting the positive role of CPR5 in this process, but does not regulate cell proliferation or endoreduplication (PubMed:21875893).

3702:AT1G06790
gene id: 3702:AT1G06790
uniprot id: A0A178WGX6
uniprot id: F4HNT3
uniprot id: Q9M9Y6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family.
messages: DNA-dependent RNA polymerase which catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Nucleus

3702:AT2G37410
gene id: 3702:AT2G37410
uniprot id: Q9SP35
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: An internal targeting signal (103-117) is required for insertion into the mitochondrial inner membrane in a membrane potential-dependent manner. The C-terminal region is exposed on the outer surface of the outer membrane and is essential for protein import.
messages: Belongs to the Tim17/Tim22/Tim23 family.
messages: Component of the TIM17:23 complex at least composed of TIM23, TIM17 and TIM50. The complex interacts with the TIM44 component of the PAM complex (By similarity). Interacts with TIM23-2.
messages: Essential component of the TIM17:23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. Links the inner and outer membranes.
messages: Expressed in roots, flowers, leaves and young cotyledons.
messages: Lethal when homozygous.
messages: Mitochondrion inner membrane
messages: Mitochondrion outer membrane
messages: Peak of expression during cotyledon development.
messages: Up-regulated after antimycin A or rotenone treatments.

3702:AT4G15980
gene id: 3702:AT4G15980
uniprot id: A0A1P8B5T5
uniprot id: O23447
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in flower buds.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT3G27390
gene id: 3702:AT3G27390
uniprot id: A0A178VDA0
uniprot id: Q8GUM4
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G46510
gene id: 3702:AT3G46510
uniprot id: Q9SNC6
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Binds to SD11, SD16, SD17, SD18, SD113, SD129 and SD25.
messages: Cytoplasm
messages: Functions as an E3 ubiquitin ligase.
messages: Nucleus
messages: Phosphorylated by SD1-6 and SD1-7.

3702:AT1G01660
gene id: 3702:AT1G01660
uniprot id: A0A1P8AQW1
uniprot id: P0C6E7
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G54770
gene id: 3702:AT1G54770
uniprot id: A0A384KZR6
uniprot id: Q84K05
names: Subcellular Location Annotation
messages: nucleolus

3702:AT3G03800
gene id: 3702:AT3G03800
uniprot id: A0A1I9LQP3
uniprot id: A0A654F3U4
names: Similarity
messages: Belongs to the syntaxin family.

3702:AT1G22290
gene id: 3702:AT1G22290
uniprot id: F4I1B7
uniprot id: F4I1B8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 14-3-3 family.
messages: Nucleus

3702:AT1G49660
gene id: 3702:AT1G49660
uniprot id: Q9FX94
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in roots, leaves, stems, flowers and siliques.

3702:AT4G24930
gene id: 3702:AT4G24930
uniprot id: Q9SW33
names: Subcellular Location Annotation
messages: chloroplast thylakoid lumen

3702:AT2G47650
gene id: 3702:AT2G47650
uniprot id: A0A178VT54
uniprot id: C0Z2I3
uniprot id: Q8S8T4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.
messages: Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity).
messages: Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.
messages: Golgi stack membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G08210
gene id: 3702:AT1G08210
uniprot id: A0A178WLQ4
uniprot id: A0A1P8AM85
uniprot id: A0A1P8AM88
uniprot id: A0A1P8AM93
uniprot id: A0A5S9T8D1
uniprot id: Q9FPD6
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G24210
gene id: 3702:AT1G24210
uniprot id: A0A178W7N3
uniprot id: Q8LCT6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G22270
gene id: 3702:AT5G22270
uniprot id: A0A178UAZ0
uniprot id: Q9FMS4
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
messages: Increased sensitivity to salt.
messages: Involved in ethylene-dependent salt stress responses by reducing reactive oxygen species (ROS) accumulation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Triggered by EIN3.

3702:AT4G09510
gene id: 3702:AT4G09510
uniprot id: Q67XD9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 100 family.
messages: Cytosolic invertase that may cleave sucrose into glucose and fructose, and that is involved in the regulation of root growth. May regulate sugar-mediated root development by controlling sucrose catabolism in root cells.
messages: cytosol

3702:AT5G17300
gene id: 3702:AT5G17300
uniprot id: F4KGY6
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Circadian-regulation. Peak of transcript abundance near subjective dawn. Down-regulated and strongly decreased amplitude of circadian oscillation upon cold treatment.
messages: Morning-phased transcription factor integrating the circadian clock and auxin pathways. Binds to the evening element (EE) of promoters. Does not act within the central clock, but regulates free auxin levels in a time-of-day specific manner. Positively regulates the expression of YUC8 during the day, but has no effect during the night. Negative regulator of freezing tolerance.
messages: No effect on the regulation of core clock associated genes, but shorter hypocotyl length and higher freezing tolerance. Rve1 and rve2 double mutant has no alteration in the period or phase of the clock. Rve1, rve2 and rve7 triple mutant has no alteration in the period or phase of the clock.
messages: Nucleus

3702:AT3G13320
gene id: 3702:AT3G13320
uniprot id: A0A178VHU2
uniprot id: Q39254
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/proton exchanger (CAX) subfamily.
messages: Inhibited by excess of Ca(2+) and Cd(2+), Mn(2+), and Zn(2+).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.
messages: Vacuole membrane

3702:AT3G20880
gene id: 3702:AT3G20880
uniprot id: Q8W030
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Nucleus
messages: Probable transcriptional regulator.

3702:AT1G17350
gene id: 3702:AT1G17350
uniprot id: A0A178WGH6
uniprot id: F4I7I6
uniprot id: Q9LQI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CIA30 family.
messages: Chaperone protein involved in the assembly of the mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
messages: Mitochondrion

3702:AT1G14790
gene id: 3702:AT1G14790
uniprot id: A0A178WKG4
uniprot id: Q9LQV2
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: Belongs to the RdRP family.
messages: By salicylic acid (SA) and infection by a crucifer-infecting tobamovirus (TMV-cg).
messages: Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).
messages: RNA-dependent direct polymerase involved in antiviral silencing. Required for the production of some small RNAs (mainly 21 and some 22 nucleotides) derived from the crucifer-infecting tobamovirus (TMV-cg). Required for turnip mosaic virus (TuMV) silencing and accumulation of viral siRNAs. Involved in cucumber mosaic virus (CMV) silencing. Required for the biogenesis of viral secondary siRNAs, process that follows the production of primary siRNAs derived from viral RNA replication. Specifically targets the positive-strand of the 3 RNA genomes of CMV and preferentially amplifies the 5'-terminal siRNAs of each viral genomic RNA. Not involved in the production of siRNAs derived from a single-stranded 336-nucleotide satellite RNA of CMV.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Upon viral infection, increased levels of TMV-cg, tobacco rattle virus (TRV) and CMV genomic viral RNAs. Reduced levels of TMV-cg-derived small RNAs and CMV-derived siRNAs.

3702:AT1G66540
gene id: 3702:AT1G66540
uniprot id: A0A654ELJ6
uniprot id: A2RVN3
uniprot id: Q0WVW6
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G28060
gene id: 3702:AT5G28060
uniprot id: Q8LC83
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS24 family.

3702:AT4G16430
gene id: 3702:AT4G16430
uniprot id: A0A178V653
uniprot id: O23487
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By UV treatment.
messages: Homodimer.
messages: Nucleus

3702:AT1G69730
gene id: 3702:AT1G69730
uniprot id: A0A654EP20
uniprot id: Q9C9L5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
messages: The EGF-like region is specific to this family of proteins and seems to consist of the C-terminal of an EGF-like domain fused to the N-terminal of another one.

3702:AT5G01230
gene id: 3702:AT5G01230
uniprot id: A0A654FX87
uniprot id: Q8GUN8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. TRM7 subfamily.
messages: Cytoplasm
messages: Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.

3702:AT5G65470
gene id: 3702:AT5G65470
uniprot id: A0A178UQM7
uniprot id: Q0WUZ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT5G49320
gene id: 3702:AT5G49320
uniprot id: Q9FJ08
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Membrane

3702:AT2G34890
gene id: 3702:AT2G34890
uniprot id: O64753
names: Function
names: Similarity
messages: Belongs to the CTP synthase family.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.

3702:AT5G54290
gene id: 3702:AT5G54290
uniprot id: F4K0A8
uniprot id: Q9M5P3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DsbD family.
messages: High chlorophyll fluorescence and deficiency in the accumulation of the cytochrome b6f complex subunits. Dwarf due to very slow growth and pale green leaves.
messages: Required for the transfer of reducing equivalents from stroma to thylakoid lumen. Involved in the biogenesis of the plastid cytochrome b6f complex by probably transferring reducing equivalents from stromal m-type thioredoxin (Trx-m) to the lumenal thioredoxin HCF164.
messages: chloroplast thylakoid membrane

3702:ArthCp001
gene id: 3702:ArthCp001
uniprot id: A0A514YJ86
uniprot id: P62126
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Exons 2 and 3 are cis-spliced, while a trans-splicing reaction is required to link exons 1 and 2.
messages: Expressed in all plant tissues.
messages: Part of the 30S ribosomal subunit.
messages: With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
messages: With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.
messages: chloroplast

3702:AT1G80000
gene id: 3702:AT1G80000
uniprot id: A0A178WMN8
uniprot id: A0A1P8AV18
uniprot id: Q93ZJ9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CASC3 family.
messages: Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Stimulates the ATPase and RNA-helicase activities of EIF4A3.
messages: Cytoplasm
messages: Nucleus
messages: Weekly interacts with EIF4A3.

3702:AT2G18570
gene id: 3702:AT2G18570
uniprot id: A0A654ETZ0
uniprot id: Q9ZU72
uniprot id: W8Q3H0
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G33440
gene id: 3702:AT1G33440
uniprot id: Q56XQ6
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in shoots, roots and stems.
messages: Membrane

3702:AT2G36000
gene id: 3702:AT2G36000
uniprot id: A0A654F0P8
uniprot id: Q9SJ50
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the mTERF family.
messages: Embryo lethal arrested at the globular stage (PubMed:21139083, PubMed:31334862). Seedling-lethal with albino phenotype due to defects in chloroplast development, photosystem assembly, and associated with an accumulation of photosynthetic proteins (PubMed:33391315).
messages: Expressed in green aerial tissues such as cotyledons, leaves, flowers and siliques, but not in roots.
messages: In flowers, confined to green tissues, including sepals, stamens and carpels, but not in petals.
messages: Self-interacts (PubMed:33391315). Associates with the plastid-encoded RNA polymerase (PEP) complex (PubMed:33391315). Interacts directly with PTAC7/PAP12, PTAC12/HMR/PAP5 and PTAC14/PAP7 (PubMed:33391315).
messages: Transcription termination factor required for chloroplast gene expression and protein synthesis in chloroplasts (PubMed:33391315). Necessary for chloroplast photosynthetic complexes assembly by modulating the accumulation of photosynthetic proteins (PubMed:33391315). Essential for embryogenesis (PubMed:21139083, PubMed:31334862).
messages: chloroplast nucleoid
messages: chloroplast stroma

3702:AT5G40940
gene id: 3702:AT5G40940
uniprot id: Q9FGW0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT1G75880
gene id: 3702:AT1G75880
uniprot id: A0A178W4S4
uniprot id: A0A5S9WUQ3
uniprot id: Q94CH8
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Flower buds.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G11110
gene id: 3702:AT3G11110
uniprot id: Q9SRM0
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G55480
gene id: 3702:AT1G55480
uniprot id: Q94BS2
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Conditional reduced growth in fluctuating white light intensities conditions, with near complete blockage in photosystem II (PSII) supercomplex formation, and concomitant increase of unassembled psbC (CP43), thus leading to reduced PSII efficiency and biomass accumulation. Increased sensitivity to high light conditions, associated with the loss of PSII supercomplexes and accelerated D1 degradation.
messages: Expressed in leaves (at protein level) (PubMed:15914918). Mostly expressed in leaves, stems and siliques, and, to a lower extent, in flowers and senescent leaves, but not present in roots (at protein level) (PubMed:25587003).
messages: Interacts directly with stromal loops of photosystem II (PSII) core components psbB (CP47) and psbC (CP43). Associates with PSII subcomplexes formed during the PSII repair cycle (e.g. PSII dimers, PSII monomers, CP43-less PSII monomerand PSII reaction centers).
messages: Involved in photosystem II supercomplex formation and repair, probably acting as a psbB/psbC chaperone on the stromal side of the membrane.
messages: Phosophorylated rapidly (e.g. within 5 minutes) but transiently at threonine and serine residues after wounding.
messages: Repressed by wounding at the transcript level, but not at the protein level (PubMed:15914918). Strong level decrease during senescence. Low levels observed in etiolated leaves and accumulates rapidly during light-induced greening (PubMed:25587003).
messages: chloroplast membrane
messages: chloroplast thylakoid membrane

3702:AT4G18260
gene id: 3702:AT4G18260
uniprot id: Q0WPS2
names: Cofactor
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: Membrane

3702:AT3G56630
gene id: 3702:AT3G56630
uniprot id: A0A384LI94
uniprot id: Q9LXX7
names: Caution
names: Similarity
messages: Belongs to the cytochrome P450 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G37380
gene id: 3702:AT2G37380
uniprot id: Q9ZUS8
names: Subcellular Location Annotation
messages: Cell membrane

3702:AT1G16825
gene id: 3702:AT1G16825
uniprot id: A0A178W6B7
uniprot id: A0A384LEA4
uniprot id: P0C941
names: Caution
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G01340
gene id: 3702:AT3G01340
uniprot id: A0A178VCP4
uniprot id: Q9SRI1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat SEC13 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Interacts with MAG5, SEC31A and SEC31B.
messages: Required for protein transport from the endoplasmic reticulum to the Golgi apparatus.

3702:AT2G25690
gene id: 3702:AT2G25690
uniprot id: A0A1P8AX29
uniprot id: A0A654F144
uniprot id: Q9SL94
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FLZ family.
messages: Cytoplasm
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:29945970). Forms heterodimer with FLZ2 in vitro (PubMed:29945970).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.
messages: Nucleus
messages: Up-regulated in response to mild as well as prolonged energy depletion (PubMed:26442059). Induced by NaCl (PubMed:26442059).

3702:AT1G55350
gene id: 3702:AT1G55350
uniprot id: A0A5S9WQ51
uniprot id: F4I0A4
uniprot id: Q8RVL2
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although homology to other calpains is high within the protease domain, the lack of calcium-binding sites suggests that this protein is a protease that may not be activated by calcium ions.
messages: Autocatalytic proteolytic cleavage leading to the production of mainly cytoplasmic localized subproducts of about 85 and 120 kDa.
messages: Belongs to the peptidase C2 family.
messages: Cell membrane
messages: Cytoplasm
messages: Defective embryo arrested at preglobular/globular stage. Disturbed endosperm lacking the aleurone-like peripheral cell layer and unorganized embryo development displaying irregular mitotic divisions in the embryo proper and suspensor. In a partially disrupted phenotype, impaired meristems organization characterized by vacuolated cells, abnormal cotyledon epiderm made of chloroplast-containing cells, and radialized leaves. Decreased numbers of giant cells in sepal epidermis of dek1-4 (PubMed:25315606).
messages: Endoplasmic reticulum membrane
messages: Endosome membrane
messages: Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active. Required for the formation of giant cells in sepals by determining cell fate and promoting endoreplication (PubMed:25315606).
messages: Mostly expressed in meristems and organ primordia. Expressed at low levels in young and germinating seeds at 10 ppm and in seedling roots at 67 ppm. Present in most tissues at a low level.
messages: Mostly observed in vegetative, inflorescence and floral meristems as well as in young leaf and floral organ primordia. Strongly expressed in developing ovules and during early embryogenesis. Expressed evenly throughout the endosperm and the embryo in developing seed. Present in the embryo proper, but excluded from the suspensor, until the late heart stage, and fades out later, especially in the hypocotyl region, to be present at low levels throughout walking-stick embryos. Accumulates at the margins and in the tips of cotyledons and lateral organs, in the apical meristem, in a subset of cells at the root pole and in a restricted number of cells within the presumptive vasculature of the hypocotyls. Also detected during early endosperm development, prior to cellularization.
messages: The transmembrane regions are not required for calpain activity but may play regulatory roles.

3702:AT1G49475
gene id: 3702:AT1G49475
uniprot id: Q9XIB4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G46000
gene id: 3702:AT3G46000
uniprot id: A0A178V7X3
uniprot id: A0A1I9LRV3
uniprot id: A0A654FD75
uniprot id: C0Z352
uniprot id: Q39251
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers (PubMed:15563618, PubMed:19794115). Required for normal cell growth, plant development, cell organ expansion and flowering. Essential for root-knot nematode infection (PubMed:19794115).
messages: Belongs to the actin-binding proteins ADF family.
messages: By the root-knot nematode Meloidogyne incognita.
messages: Interacts with AIP1-1.
messages: Plants silencing ADF2 show net stabilization of F-actin that blocks cell maturation and root-knot nematode development and reproduction.
messages: cytoskeleton

3702:AT4G30320
gene id: 3702:AT4G30320
uniprot id: A0A178UUV4
uniprot id: Q9M0C8
names: Function
messages: Probably involved in the defense reaction of plants against pathogens.

3702:AT1G52825
gene id: 3702:AT1G52825
uniprot id: A0A384KBC7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G01830
gene id: 3702:AT5G01830
uniprot id: Q9LZW3
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G19340
gene id: 3702:AT1G19340
uniprot id: A0A654EB84
uniprot id: Q8LFA9
names: Function
names: Similarity
messages: Belongs to the MT-A70-like family.
messages: Probable methyltransferase.

3702:AT4G34590
gene id: 3702:AT4G34590
uniprot id: O65683
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A highly conserved upstream open reading frame (uORF) coding for 42 amino acids is essential for the BZIP11 sucrose-induced repression of translation (SIRT) (PubMed:15208401). Plants over-expressing BZIP11 show severe alterations of plant growth and development, reduced seed set and viability (PubMed:18088315).
messages: By light (PubMed:9620274). Induced by hypoosmolarity (PubMed:15047879). Repressed by sucrose (at protein level) (PubMed:9721683, PubMed:15208401).
messages: Forms heterodimers with BZIP1, BZIP9, BZIP10, BZIP25 and BZIP63 (PubMed:16709202). Interacts with ADA2B (PubMed:24861440).
messages: Highly expressed in stems and flowers (PubMed:9620274). Expressed in root tips, cotyledons, leaf vasculature, embryos, apical parts of siliques and funiculi (PubMed:9721683).
messages: Nucleus
messages: Transcription factor that binds to the DNA sequence 5'-ACTCAT-3' in target gene promoters. Promotes POX1/PRODH1 expression in response to hypoosmolarity stress (PubMed:15047879). Positively regulates the expression of ASN1 and POX2/PRODH2 genes, which are involved in amino acid metabolism (PubMed:18088315). Regulates several metabolic pathways such as myo-inositol, raffinose and trehalose. Regulates several trehalose metabolism genes, including TRE1, TPP5 and TPP6 (PubMed:21534971). Mediates recruitment of the histone acetylation machinery to activate auxin-induced transcription. Interacts with ADA2B adapter protein to promote ADA2B-mediated recruitment of SAGA-like histone acetyltransferase complexes to specific auxin-responsive genes (PubMed:24861440).

3702:AT3G26000
gene id: 3702:AT3G26000
uniprot id: Q9LU91
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with CUL1, SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G20250
gene id: 3702:AT5G20250
uniprot id: F4K470
uniprot id: Q8RX87
names: Developmental Stage
names: Function
names: Induction
names: Similarity
messages: Belongs to the glycosyl hydrolases 36 family.
messages: By oxidative stress and by dark treatment. Down-regulated by sucrose, but not by osmotic treatment.
messages: Expressed in 24 hours imbibed seeds and during leaf senescence.
messages: Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers (By similarity).
messages: Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.

3702:AT3G51280
gene id: 3702:AT3G51280
uniprot id: Q9SD20
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MS5 protein family.
messages: Nucleus
messages: Probably involved in the regulation of cell division.

3702:AT5G26950
gene id: 3702:AT5G26950
uniprot id: A0A654G4Q2
uniprot id: Q7X9H9
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in pollen.
messages: Nucleus
messages: Probable transcription factor.

3702:AT2G41280
gene id: 3702:AT2G41280
uniprot id: O81483
names: Developmental Stage
names: Function
messages: Expressed exclusively in seeds from late embryogenesis until 1 day after imbibition.
messages: May be involved in the acquisition of desiccation tolerance during late phase of embryogenesis.

3702:AT4G31390
gene id: 3702:AT4G31390
uniprot id: Q8RWG1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. ADCK protein kinase family.
messages: Expressed in all tissues (e.g. especially in leaves) at all developmental stages from seed germination to flowering, except in the root tips.
messages: High chlorophyll fluorescence and reduced non-photochemical quenching (NPQ) caused by defects in photosynthetic electron transport. Specifically deficient in the electron carrier plastoquinone, as well as in beta-carotene and the xanthophyll lutein, and defective in membrane antioxidant tocopherol metabolism. Altered plastoglobule protein composition (PubMed:24267661). Abnormal development with albino cotyledons and paler mesophyll cells leading to yellow-green leaves due to reduced contents of carotenoids and chlorophyll, as well as changes in the numbers of chlorophyll-binding proteins of the photosynthetic complexes (PubMed:22447966, PubMed:24267661, PubMed:25882344). In bdr1-1 and bdr1-2, increased accumulation of anthocyanin under red and blue light conditions. Exposure to red light for 5 days leads to dwarf plants with pale green rosette leaves. Reduced level of D1 protein, product of psbA, one of the four core subunits of the photosystem II (PSII) (PubMed:25882344). Increased levels of chlorophyll degradation products such as chlorophyllide (Chlide) a and pheophorbide a. Stronger photosynthetic and metabolic perturbations in response to high light stress and methyl viologen (paraquat, MV), a herbicide triggering photooxidative stress, strongly affecting carbohydrate metabolism (PubMed:22447966, PubMed:24267661). However, the mutant acclimates to high light after 7 days together with a recovery of carotenoid levels and a drastic alteration in the starch-to-sucrose ratio (PubMed:24267661). Lower transcript levels of the oxidative stress response genes FSD1, CSD1, CAT1, and UTG71C1 after MV treatment (PubMed:22447966). Conditional light stress phenotype in the double mutant abc1k1 abc1k3 that displays rapid chlorosis upon high light stress and slower, but irreversible, senescence-like phenotype during moderate light stress, drought or nitrogen limitation, but not cold stress. This senescence-like phenotype is associated with the degradation of the photosystem II…
messages: Interacts with ABC1K3 in plastoglobules (PG).
messages: Kinase that can phosphorylate the tocopherol cyclase VTE1, a key enzyme of tocopherol (vitamin E) metabolism and involved in the recycling of oxidated alpha-tocopherol quinone, possibly stabilizing it at plastoglobules. Regulates also plastoglobule protein composition (PubMed:24267661). Prevents photodamage of chloroplasts under continuous red light, thus working in opposition to ABC1K3 (PubMed:25882344). Together with ABC1K1, contributes to plastoglobule (PG) function in prenyl-lipid metabolism, stress response, and thylakoid remodeling (PubMed:23673981, PubMed:24267661). Involved in chlorophyll degradation and in the maintenance of the number of chlorophyll-binding photosynthetic thylakoid membranes (PubMed:22447966). Ensures photosynthetic electron transport by regulating the homeostasis of plastoquinone, beta-carotene and xanthophyll lutein, as well as membrane antioxidant tocopherol metabolism (PubMed:24267661). Seems to affect specifically stability or turnover of D1 protein, product of psbA, one of the four core subunits of the photosystem II (PSII) (PubMed:25882344). Required for photooxidative stress responses, including the induction of oxidative stress response genes (e.g. FSD1, CSD1, CAT1, and UTG71C1), to prevent photosystem II core and chlorophyll degradations (PubMed:22447966, PubMed:23673981, PubMed:24267661).
messages: Up-regulated by methyl viologen (paraquat, MV) treatment, a herbicide triggering photooxidative stress.
messages: chloroplast
messages: plastoglobule

3702:AT3G48110
gene id: 3702:AT3G48110
uniprot id: Q8L785
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of glycine to tRNA(Gly). Is also able produce diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs.
messages: Embryo defective. Developmental arrest of the embryo between the globular and heart stages (PubMed:9707529). Plants with partial loss of EDD1 display changes in patterning of margin and distal regions of leaves (PubMed:22791832).
messages: Homodimer.
messages: May be due to a competing donor splice site.
messages: Mitochondrion
messages: chloroplast

3702:AT5G58040
gene id: 3702:AT5G58040
uniprot id: A0A1P8BFZ5
uniprot id: A0A7G2FHX8
uniprot id: F4KDH9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FIP1 family.
messages: Component of the cleavage and polyadenylation specificity factor (CPSF) complex (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits CFIS1, CFIS2, CPSF30, CSTF50, CSTF64, CSTF77, FIPS3, PABN1, PABN2, PABN3, PAPS4, CFIM25 and PABN1. Binds RNA (PubMed:16282318, PubMed:17576667, PubMed:18479511, PubMed:18221017).
messages: Essential gene (PubMed:16282318). Component of the cleavage and polyadenylation specificity factor (CPSF) complex that plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. FIP1L1 contributes to poly(A) site recognition and stimulates poly(A) addition. Binds to U-rich RNA sequence elements surrounding the poly(A) site. May act to tether poly(A) polymerase to the CPSF complex (By similarity).
messages: Expressed in leaves, stems, flower tissues and roots.
messages: Lethal.
messages: Nucleus

3702:AT4G31850
gene id: 3702:AT4G31850
uniprot id: Q9SZ52
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Plays a role in the stabilization of the primary polycistronic transcript of the petL operon encoding subunits of the cytochrome b6-f complex.
messages: chloroplast

3702:AT5G02440
gene id: 3702:AT5G02440
uniprot id: A0A178UKG6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G16510
gene id: 3702:AT1G16510
uniprot id: A0A178WMN7
uniprot id: Q9SA49
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARG7 family.
messages: By auxin.
messages: Cytoplasm
messages: During lateral root development, expressed in the prospective quiescent center of lateral root primordia. In newly formed lateral roots, strongly expressed in the quiescent center and initial cells and weakly expressed in the endodermis.
messages: Plants over-expressing SAUR41 display pleiotropic auxin-related phenotypes. These phenotypes include elongated hypocotyls, increased length of primary roots, increased numbers of lateral roots, increased vegetative biomass, twisted inflorescence stems, overexpanded petals, reduced seed setting and increased basipetal auxin transport in hypocotyls.
messages: Plays a role in the regulation of cell expansion, root meristem patterning and auxin transport.
messages: Specifically expressed in the quiescent center and cortex or endodermis initials of root stem niches. Expressed in vascular tissues from hypocotyls, petioles and cotyledons.

3702:AT3G14100
gene id: 3702:AT3G14100
uniprot id: Q9LJH8
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-like protein that acts as a component of the pre-mRNA processing machinery. Functions at multiple steps to facilitate the nuclear maturation of plant pre-mRNAs (By similarity).
messages: Interacts with UBA1A and UBA2A.
messages: Nucleus

3702:AT1G72260
gene id: 3702:AT1G72260
uniprot id: Q42596
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant thionin (TC 1.C.44) family.
messages: Detected in rosette leaves and at a very high level in flowers and in siliques.
messages: Highly induced in seedlings by pathogens, wounding, silver nitrate, and methyl jasmonate.
messages: Secreted
messages: Seems to function as a defense factor. Thionins are small plant proteins which are toxic to animal cells. They seem to exert their toxic effect at the level of the cell membrane. Their precise function is not known.

3702:AT1G63450
gene id: 3702:AT1G63450
uniprot id: A0A178W9N1
uniprot id: Q9SH31
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: Lacks acidic xyloglucan and has short root hairs.
messages: Membrane
messages: Root hair specific (PubMed:19448035, PubMed:22253603). Expressed in roots and young leaves (PubMed:15020758).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Xyloglucan-specific galacturonosyltransferase that forms the beta-D-galactosyluronic acid-(1->2)-alpha-D-xylosyl linkage. Required for root hair development probably by providing important acidic xyloglucans.

3702:AT4G27650
gene id: 3702:AT4G27650
uniprot id: A0A178V176
uniprot id: Q9ZT87
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the eukaryotic release factor 1 family. Pelota subfamily.
messages: Component of the Pelota-HBS1L complex, a complex that recognizes stalled ribosomes and triggers the No-Go Decay (NGD) pathway. In the Pelota-HBS1L complex, pelo recognizes ribosomes stalled at the 3' end of an mRNA and engages stalled ribosomes by destabilizing mRNA in the mRNA channel.
messages: Component of the Pelota-HBS1L complex, a complex that recognizes stalled ribosomes and triggers the No-Go Decay (NGD) pathway. In the Pelota-HBS1L complex, pelo recognizes ribosomes stalled at the 3' end of an mRNA and engages stalled ribosomes by destabilizing mRNA in the mRNA channel. Following ribosome-binding, the Pelota-HBS1L complex promotes the disassembly of stalled ribosomes, followed by degradation of damaged mRNAs as part of the NGD pathway.
messages: Cytoplasm
messages: Expressed constitutively in seedlings, buds, stems, leaves and roots.
messages: Nucleus

3702:AT2G27730
gene id: 3702:AT2G27730
uniprot id: Q9ZUX4
names: Subcellular Location Annotation
messages: Mitochondrion

3702:AT4G08485
gene id: 3702:AT4G08485
uniprot id: Q2V3K7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT2G23960
gene id: 3702:AT2G23960
uniprot id: A0A1P8AXE1
uniprot id: A0A5S9X0U4
uniprot id: F4INN2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C26 family.
messages: Involved in glucosinolate biosynthesis. Hydrolyzes the gamma-glutamyl peptide bond of several glutathione (GSH) conjugates to produce Cys-Gly conjugates related to glucosinolates. The gamma-Glu-Cys-Gly-GSH conjugates are the sulfur-donating molecule in glucosinolate biosynthesis.
messages: cytosol

3702:AT5G07660
gene id: 3702:AT5G07660
uniprot id: Q9FLR5
names: Disruption Phenotype
names: Domain
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SMC family. SMC6 subfamily.
messages: Chromosome
messages: Core component of the SMC5-SMC6 complex that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
messages: Delayed root growth in seedlings.
messages: Expressed in seedlings, rosette leaves and floral buds.
messages: Forms a heterodimer with SMC5. The SMC5-SMC6 complex is composed of the SMC5 and SMC6 heterodimer attached via their hinge domain and from the non-SMC subunit NSE4A or NSE4B (By similarity).
messages: Intron retention.
messages: Nucleus
messages: The flexible hinge domain, which separates the large intramolecular coiled coil regions, allows the heterotypic interaction with the corresponding domain of SMC6, forming a V-shaped heterodimer.

3702:AT3G62000
gene id: 3702:AT3G62000
uniprot id: A0A384LJU8
uniprot id: A0A654FJX5
uniprot id: F4IX20
uniprot id: Q9M265
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family.

3702:AT1G10730
gene id: 3702:AT1G10730
uniprot id: A0A5S9TQV3
uniprot id: Q9SAC9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 1 (AP-1) is a heterotetramer composed of two large adaptins (gamma-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes medium subunit family.
messages: Golgi apparatus
messages: Growth retardation phenotype.
messages: Membrane
messages: Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. Functions redundantly with AP1M2 in multiple post-Golgi trafficking pathways leading from the TGN to the vacuole, the plasma membrane, and the cell-division plane.
messages: clathrin-coated vesicle membrane

3702:AT1G01100
gene id: 3702:AT1G01100
uniprot id: A0A178WHE0
uniprot id: A8MQK8
uniprot id: Q8LCW9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein P1/P2 family.
messages: P1 and P2 exist as dimers at the large ribosomal subunit.
messages: Plays an important role in the elongation step of protein synthesis.

3702:AT5G36280
gene id: 3702:AT5G36280
uniprot id: A0A178UFI5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02850
gene id: 3702:AT3G02850
uniprot id: A0A178VHK5
uniprot id: A0A1I9LLU0
uniprot id: A0A1I9LLU1
uniprot id: Q9M8S6
names: Caution
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.
messages: Expressed in root pericycle and xylem parenchyma, and in flower at a lower level.
messages: Highly selective outward-rectifying potassium channel. Involved in potassium release into the xylem sap toward the shoots. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by depolarization. The voltage-dependence of the channel is abolished by internal or external acidification. May interact with the cytoskeleton or with regulatory proteins.
messages: In roots, strongly inhibited by 2,4-dichlorophenoxyacetic acid (2,4-D), abscisic acid (ABA) and benzyladenine (BA) treatment or by potassium starvation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Loss-of-function mutation skor-1 leads to a reduced shoot potassium content.
messages: Membrane
messages: Potassium channel.
messages: The KHA domain (rich in hydrophobic and acidic residues) present in the C-terminal part is likely to be important for tetramerization.
messages: The potassium channel is composed of a homo- or heterotetrameric complex of pore-forming subunits.
messages: The potassium channel is probably composed of a homo- or heterotetrameric complex of pore-forming subunits.
messages: The segment S4 is probably the voltage-sensor and is characterized by a series of positively charged amino acids. The pore-forming region H5 is enclosed by the transmembrane segments S5 and S6 in the Shaker-type (1P/6TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity.

3702:AT5G12235
gene id: 3702:AT5G12235
uniprot id: Q3E9I4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance.
messages: Mostly expressed in stems and apex, and, to a lower extent, in seedlings, leaves, flowers and siliques.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-97 enhances binding affinity of the CLE22p peptide for its receptor.
messages: extracellular space

3702:AT1G76430
gene id: 3702:AT1G76430
uniprot id: A0A384KTV4
uniprot id: Q0WRM8
uniprot id: Q9S735
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Although related to the sugar transporter family, it does not transport sugars.
messages: Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.
messages: High-affinity transporter for external inorganic phosphate.
messages: Membrane
messages: Slightly induced in roots during phosphate starvation.

3702:AT4G39650
gene id: 3702:AT4G39650
uniprot id: Q680I5
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the gamma-glutamyltransferase family.
messages: By glutathione.
messages: Expressed in roots, immature trichomes and pollen. In developing siliques, specifically expressed in the embryo, endosperm, outer integument and a small portion of the funiculus.
messages: May be required for glutathione transport into developing seeds.
messages: No visible phenotype under normal growth conditions.
messages: apoplast

3702:AT3G03700
gene id: 3702:AT3G03700
uniprot id: A0A5S9X8W7
uniprot id: Q9S7M7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CTL (choline transporter-like) family.
messages: Cell membrane
messages: Choline transporter.
messages: Membrane

3702:AT1G32250
gene id: 3702:AT1G32250
uniprot id: Q9LQN4
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT2G18550
gene id: 3702:AT2G18550
uniprot id: C0SV50
uniprot id: Q9ZU70
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: By abscisic acid (ABA) and by salt stress.
messages: Nucleus
messages: Probable transcription factor.
messages: Transcription factor.
messages: Widely expressed.

3702:AT2G21390
gene id: 3702:AT2G21390
uniprot id: A0A654EW13
uniprot id: Q9SJT9
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3702:AT1G77010
gene id: 3702:AT1G77010
uniprot id: O49287
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT2G46810
gene id: 3702:AT2G46810
uniprot id: A0A178VN42
uniprot id: A0A1P8B1G0
uniprot id: A0A384KB27
uniprot id: A0A384KPF2
uniprot id: I2FGF6
uniprot id: O81037
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT2G28390
gene id: 3702:AT2G28390
uniprot id: Q9SKN1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MON1/SAND family.
messages: Due to the stability of its transcription during plant development, this gene is proposed as a reference gene for transcript normalization.
messages: Endosome
messages: Interacts with CCZ1A, CCZ1B and RABF2B.
messages: Plays an important role in membrane trafficking through the secretory apparatus. In complex with CCZ1, acts as a guanine exchange factor (GEF) for RABG3F of the Rab7 protein family. Promotes the exchange of GDP to GTP, converting RABG3F from an inactive GDP-bound form into an active GTP-bound form. The RABG3F active form is involved in protein trafficking from prevacuolar compartments (PVCs) to vacuoles. May serve as a linker between Rab5 and Rab7 protein families in PVCs and mediate PVC maturation.
messages: Prevacuolar compartment
messages: Severe plant growth defects, such as short root phenotype, retarded growth and dwarf phenotype.
messages: Widely expressed at stable levels.

3702:AT2G46760
gene id: 3702:AT2G46760
uniprot id: A0A5S9X8D2
uniprot id: O81032
names: Function
names: Similarity
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: May be involved in the biosynthesis of ascorbic acid.

3702:AT3G15570
gene id: 3702:AT3G15570
uniprot id: A0A7G2EL69
uniprot id: Q9LRP8
names: Similarity
messages: Belongs to the NPH3 family.

3702:AT1G54840
gene id: 3702:AT1G54840
uniprot id: A0A178W270
uniprot id: Q8RWL4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Expressed in cotyledons and hypocotyls in young seedlings.
messages: Homodimer or oligomer (PubMed:24920332). May form an 16-mer complex (PubMed:24920332). Interacts with MBD7 (via C-terminus) (PubMed:25684209, PubMed:25593350). Interacts with IDM1 (via N-terminus) (PubMed:25002145, PubMed:24920332, PubMed:25684209). Interacts with IMD3 (PubMed:25684209). Part of a complex made of MBD7, IDM1, IDM2, IDM3 and ROS1 (PubMed:24920332, PubMed:25684209).
messages: No visible growth or developmental defects under normal growth conditions (PubMed:24920332). DNA hypermethylation (PubMed:25002145).
messages: Not regulated by heat.
messages: Prevents DNA hypermethylation and transcriptional silencing of transgenes and of some endogenous genes (PubMed:25002145, PubMed:24920332). May act as a molecular chaperone of IDM1, regulating its H3K18 acetylation activity (PubMed:25002145, PubMed:24920332).
messages: nucleoplasm

3702:AT3G03520
gene id: 3702:AT3G03520
uniprot id: Q9SRQ6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the bacterial phospholipase C family.
messages: Expressed in root tips, cotyledons, on leaf margins, stems, young anthers and funiculus.
messages: Induced by auxin in roots. Not induced by inorganic phosphate deprivation.
messages: No visible phenotype under normal growth conditions.
messages: Possesses specific phosphatase activity toward lysophosphatidic acid (LPA) in vitro. Does not show phospholipase C activity. May play a role in signal transduction and storage lipid synthesis. May be involved in brassinolide-mediated signaling in root development.

3702:AT2G13810
gene id: 3702:AT2G13810
uniprot id: A0A178VQ02
uniprot id: Q9ZQI7
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aminotransferase involved in local and systemic acquired resistance (SAR) to the bacterial pathogen P.syringae. Required for salicylic acid (SA) and camalexin accumulation upon pathogen infection. Possesses aminotransferase activity in vitro and may generate amino-acid-derived defense signals in vivo. May be involved in ethylene-induced senescence signaling. Involved in the biosynthesis of pipecolate (Pip), a metabolite that orchestrates defense amplification, positive regulation of SA biosynthesis, and priming to guarantee effective local resistance induction and the establishment of SAR (PubMed:23221596, PubMed:27758894). Converts lysine to alpha-keto-epsilon-aminocaproate, which then can spontaneously cyclize to form delta-(1)-piperideine-2-carboxylate (P2C). P2C is converted to Pip by SARD4 (PubMed:27758894). May produce non-Pip metabolites that play roles in immunity. Involved in the synthesis of distinct metabolite signals that affect basal and early defenses, and later defense responses (PubMed:25372120).
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: By ozone, benzothiadiazole (BTH) and infection with the bacterial pathogen P.syringae pv. maculicola. Down-regulated by nitric oxide.
messages: Highly expressed in senescing leaves, flowers, siliques and seeds.
messages: No visible phenotype under normal growth conditions, but during infection with virulent strain of P.syringae, mutant plants have reduced levels of SA and camalexin, and show increased susceptibility to pathogen. Leaves show decreased ethylene-induced senescence.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Treatment with exogenous pipecolate (Pip) enhances disease resistance to Pseudomonas syringae pv. maculicola (PubMed:23221596). Plants over-expressing ALD1 exhibit resistance to Pseudomonas syringae pv. maculicola (PubMed:25372120).
messages: chloroplast

3702:AT1G29300
gene id: 3702:AT1G29300
uniprot id: A0A178WMX1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02790
gene id: 3702:AT1G02790
uniprot id: A0A178WH12
uniprot id: P49062
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: May function in depolymerizing pectin during pollen development, germination, and tube growth. Acts as an exo-polygalacturonase.
messages: Secreted
messages: cell wall

3702:AT3G19130
gene id: 3702:AT3G19130
uniprot id: Q0WW84
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the polyadenylate-binding RBP47 family.
messages: Cytoplasmic granule
messages: Expressed at low levels in leaves, stems, flowers, and seedlings.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
messages: Interacts with the poly(A) tail of mRNA in nucleus.
messages: Nucleus
messages: Repressed by ozone-induced oxidative stress.

3702:AT1G45050
gene id: 3702:AT1G45050
uniprot id: A0A1P8AWD8
uniprot id: P42743
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT4G26000
gene id: 3702:AT4G26000
uniprot id: Q9SZH4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Detected in roots, shoots, leaves, flowers and fruits.
messages: In seedlings, expressed in leaf primordia and young developing leaves. Progressively circumscribed to the adaxial side of developing leaves to become restricted to the veins in fully expanded leaves. In roots, confined to the vasculature. Present in floral buds and young developing flower organs. Accumulates in perianth organs and stamens before being restricted to the vascular system in later postanthesis stages. Strong expression throughout the young pistil. Disappears from the apical stigma during postanthesis fruit maturation. Detected in the style until later stages in fruit development, mainly in style vasculature, but progressively fades away from most of the ovary region.
messages: Interacts with HUA1 and HEN4.
messages: Nucleus
messages: Regulates vegetative and gynoecium development (PubMed:16356489). In concert with HUA2, antagonizes FLK by positively regulating FLC probably at transcriptional and post-transcriptional levels, and thus acts as a negative regulator of flowering (PubMed:19576878).
messages: Subtle morphological alterations in pep-2 and pep-4 such as leaf alterations, phyllotactic errors and sporadic presence of small fruits with multiple valves. Occasional asymmetry in valve growth and unfused carpels (PubMed:16356489). Rescues the flk mutant late-flowering phenotype with a concomitant decrease in FLC RNA levels (PubMed:19576878).

3702:AT1G16360
gene id: 3702:AT1G16360
uniprot id: A0A1P8AN78
uniprot id: A0A1P8AN80
uniprot id: A0A1P8AN88
uniprot id: A0A654EAG7
uniprot id: Q9SA35
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CDC50/LEM3 family.
messages: Expressed in flowers. May be restricted to pollen grains.
messages: Membrane

3702:AT1G68380
gene id: 3702:AT1G68380
uniprot id: Q9M9C3
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G29130
gene id: 3702:AT4G29130
uniprot id: A0A384KTL6
uniprot id: Q0WLE0
uniprot id: Q42525
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the hexokinase family.
messages: Fructose and glucose phosphorylating enzyme (PubMed:7610198). May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol (PubMed:16920781). Acts as sugar sensor which may regulate sugar-dependent gene repression or activation (PubMed:9014361, PubMed:12690200, PubMed:26528314). Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism (PubMed:9014361, PubMed:12690200). May regulate the execution of program cell death in plant cells (PubMed:16920781). Promotes roots and leaves growth (PubMed:26528314). Together with sugar, is involved in the regulation of the expression of aquaporin genes, and reduces leaf water conductance, to coordinate sugar levels with the loss of water through transpiration (PubMed:28390076). Regulates cell proliferation and expansion early during leaf development (PubMed:30511331). Involved in sucrose-induced leaf growth stimulation independently of GPT2 (PubMed:30511331). May participate to the stimulation of hypocotyl elongation under long-day (LD) conditions (PubMed:34155329). Forms a nuclear complex with CLF and EZA1/SWN to target common glucose-responsive genes and regulate glucose signaling (PubMed:35394700). Is required for CLF- and EZA1/SWN-mediated histone H3 trimethylation on 'Lys-27' (H3K27me3) and glucose-mediated gene repression (PubMed:35394700).
messages: Highly expressed in flowers and siliques, at intermediate levels in roots and stems, and at lower levels in rosette and cauline leaves.
messages: Interacts with RPT5B in nucleus. Interacts with RHIP1 (PubMed:26528314). Interacts with KING1 in mitochondria (PubMed:30511331). Interacts with CLF (via SANT domain) and EZA1/SWN (via SANT domain) in nucleus (PubMed:35394700).
messages: Mitochondrion outer membrane
messages: Nucleus
messages: Plants display a glucose-insensitive phenotype which allows them to grow on high glucose concentration medium (>6% glucose) (PubMed:12690200, PubMed:26528314, PubMed:30511331). Dwarf plants with reduced roots and leaves growth (PubMed:26528314, PubMed:30511331).

3702:AT5G13760
gene id: 3702:AT5G13760
uniprot id: A0A654G0T4
uniprot id: F4K425
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CTL (choline transporter-like) family.
messages: Cell membrane
messages: Choline transporter.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT3G50770
gene id: 3702:AT3G50770
uniprot id: Q8L3R2
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT1G32050
gene id: 3702:AT1G32050
uniprot id: Q9C6X2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SCAMP family.
messages: Cell membrane
messages: Probably involved in membrane trafficking.
messages: secretory vesicle membrane

3702:AT2G01960
gene id: 3702:AT2G01960
uniprot id: Q58G33
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tetraspanin (TM4SF) family.
messages: May be involved in the regulation of cell differentiation.
messages: Membrane

3702:AT2G47140
gene id: 3702:AT2G47140
uniprot id: Q94K41
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT2G39880
gene id: 3702:AT2G39880
uniprot id: O04192
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Abnormal male gametophyte (pollen) development including deformed cell wall, two-celled phenotype (one regular vegetative nucleus and one sperm cell-like nucleus, both in center) and semtimes leading to abortion.
messages: May be the target of the microRNA (miRNA) MIR393a.
messages: Nucleus
messages: Required for male gametophyte (pollen) development.

3702:AT1G62360
gene id: 3702:AT1G62360
uniprot id: A0A178WBW0
uniprot id: Q38874
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/KNOX homeobox family.
messages: Cell membrane
messages: Cytoplasm
messages: Endosome
messages: Expressed in all four types of shoot apical meristems (SAM) i.e. in vegetative, axillary, inflorescence and floral.
messages: First expressed in early to mid-globular-stage embryos. In late globular stage, detected as a stripe running medially across the top of the embryo. In heart stage embryo, expression is restricted to a notch between the cotyledons, in both hypodermal and protoderm cells. In the bending-cotyledon stage, localized in the SAM, but disappears from the boundary region of cotyledon margins (BCM). In seedlings and adult plants found in all shoot apical meristems. In the inflorescence meristem, expression disappears as floral buds are initiated and reappears in the later floral meristem where it is found in the central portion of the developing gyneocium. Also detected in the L1 layer of embryo.
messages: Forms homodimers (PubMed:17965274). May form heterodimeric complexes with TALE/BELL proteins BEL1, BLH2, BLH3, BLH8/PNF, BLH9/PNY and ATH1. Interacts with CCT8 (PubMed:21868675). Binds to MBP2C; this interaction reduces RNA binding capacity (PubMed:17965274). Interacts with FTIP3 and FTIP4 (PubMed:29742441).
messages: Nucleus
messages: Required for shoot apical meristem (SAM) formation during embryogenesis. Negatively regulates ASYMMETRIC LEAVES1 (AS1) and ASYMMETRIC LEAVES2 (AS2 or LBD6). Probably binds to the DNA sequence 5'-TGAC-3'. Binds to RNA (By similarity).
messages: plasmodesma

3702:AT3G08710
gene id: 3702:AT3G08710
uniprot id: Q9C9Y6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thioredoxin family. Plant H-type subfamily.
messages: Cell membrane
messages: Dwarf plants with short roots and small yellowish leaves.
messages: Probable thiol-disulfide oxidoreductase that may play a role in intercellular communication due to its ability to move from cell to cell.
messages: Ubiquitous.

3702:AT1G22070
gene id: 3702:AT1G22070
uniprot id: Q147Q9
uniprot id: Q39234
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Binds DNA as a dimer. Interacts with NPR1, NPR3 and NPR4. Interacts with GRXC7/ROXY1.
messages: Expressed in the whole plant.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

3702:AT5G63550
gene id: 3702:AT5G63550
uniprot id: A0A178U9G8
uniprot id: Q84JB7
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Chromatin-associated protein which contributes to the modulation of chromatin structure (such as super-helical structure of DNA) and function (By similarity). Binds to chromatin of protein-coding genes throughout the genome to regulate nucleosome occupancy and chromatin accessibility, and to modulate the expression of target genes (By similarity).
messages: Found in a mRNA splicing-dependent exon junction complex (EJC) (By similarity). Binds specifically histones H3 and H4 (By similarity).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus

3702:AT1G17950
gene id: 3702:AT1G17950
uniprot id: Q6R0C4
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By abscisic acid (PubMed:16463103, PubMed:21399993). Accumulates in response to salt (PubMed:21399993). Triggered by MYB46 and MYB83 in the regulation of secondary cell wall biosynthesis (PubMed:19674407, PubMed:22197883).
messages: Expressed in stamen (PubMed:19325888). Present in roots and siliques, and, at low levels, in leaves and flowers (PubMed:21399993). Expressed in stems, especially in fibers and, at lower levels, in xylems (PubMed:18952777, PubMed:21399993).
messages: Has been reported as both positive and negative regulator of secondary cell wall (SCW) biosynthesis by contradictory mutants phenotypes.
messages: Nucleus
messages: Secondary cell wall (SCW) defects including severe reduction in SCW thickening in both interfascicular fibers and xylary fibers of inflorescence stems (PubMed:18952777). Hyperlignified SCW in interfascicular fibers and xylary fibers (PubMed:23781226).
messages: Transcription factor that confers sensitivity to abscisic acid (ABA) and salt, but tolerance to drought (PubMed:21399993). Regulates secondary cell wall (SCW) biosynthesis, especially in interfascicular and xylary fibers (PubMed:18952777, PubMed:23781226).

3702:AT3G61740
gene id: 3702:AT3G61740
uniprot id: A0A654FJU8
uniprot id: F4JFG2
uniprot id: Q9M364
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
messages: Histone methyltransferase.
messages: Nucleus

3702:AT3G46430
gene id: 3702:AT3G46430
uniprot id: P0DO44
uniprot id: P0DO45
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase 6 subunit family.
messages: Induced by several abiotic stresses such as salt, mannitol, drought and cold (PubMed:18338219). Under oxidative stress caused by H(2)O(2), transient induction followed by strongly reduced levels (PubMed:18338219). Induced by sucrose (PubMed:15829605).
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain (Probable). F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk (Probable). During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (Probable). Part of the complex F(0) domain (Probable). Confers tolerance to several abiotic stresses (e.g. salt, mannitol, drought, oxidative and cold stresses), probably by providing additional energy needed for cell homeostasis (PubMed:18338219, PubMed:23096681).
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain (Probable). F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk (Probable). During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (Probable). Part of the complex F(0) domain (Probable). Confers tolerance to several abiotic stresses (e.g. salt, mannitol, drought, oxidative and cold stresses), probably by providing additional energy needed for cell homeostasis (PubMed:23096681).
messages: Mitochondrion inner membrane

3702:AT5G64630
gene id: 3702:AT5G64630
uniprot id: A0A654GE63
uniprot id: F4KF21
uniprot id: Q9SXY1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat HIR1 family.
messages: Component of the chromatin assembly factor 1 (CAF-1) complex, composed of FAS1, FAS2 and MSI1.
messages: Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including seedling growth and leaf hair differentiation. Plays a critical role in the organization of shoot apical meristem (SAM) and root apical meristem (RAM) during postembryonic development by facilitating stable maintenance of gene expression states. Seems not required to maintain transcriptional repression of heterochromatic genes. Involved in heterologous recombination.
messages: Fasciated plants with broad, flat stems and disrupted phyllotaxy. Shoot apical meristem enlargement and altered floral development. Reduced heterochromatin content, more open conformation of euchromatin and dramatic increase of homologous recombination.
messages: Nucleus

3702:AT5G03690
gene id: 3702:AT5G03690
uniprot id: A0A1P8BBB5
uniprot id: A0A5S9Y1D7
uniprot id: F4KGQ0
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: By glucose and fructose (PubMed:22561114). Induced by abiotic stresses (PubMed:22561114).
messages: Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis.
messages: Highly expressed in flowers.
messages: Homotetramer.
messages: S-glutathionylated at Cys-207.
messages: S-nitrosylated at Cys-207.
messages: cytosol

3702:AT4G13300
gene id: 3702:AT4G13300
uniprot id: Q9T0K1
names: Cofactor
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: By wounding.
messages: Cytoplasm
messages: Involved in sesquiterpene (C15) biosynthesis. The major product is (Z)-gamma-bisabolene with minor amounts of (E)-nerolidol and alpha-bisabolol.
messages: Predominantly expressed in roots. Expressed in the cortex and the sub-epidermal layers of roots. Also detected in leaf hydathodes and flower stigmata.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT5G50320
gene id: 3702:AT5G50320
uniprot id: A0A178UGS1
uniprot id: Q93ZR1
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ELP3 family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalytic tRNA acetyltransferase subunit of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine) (PubMed:20398216). In the elongator complex, acts as a tRNA uridine(34) acetyltransferase by mediating formation of carboxymethyluridine in the wobble base at position 34 in tRNAs (By similarity). Promotes organ development by modulating cell division rate (PubMed:20080602). Required for auxin distribution or signaling (PubMed:20080602). Required for meristem cell cycle activation at the time of germination (PubMed:23969312). Mediates the establishment of leaf polarity independently of AS2 and the ta-siRNA-related pathway (PubMed:21700721). Indirectly involved in negatively regulating the expression of genes that participate in UV-B responses, such as DNA repair enzymes and enzymes that participate in sunscreen pigment biosynthesis (PubMed:25907565).
messages: Catalytic tRNA acetyltransferase subunit of the elongator complex, which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine). In the elongator complex, acts as a tRNA uridine(34) acetyltransferase by mediating formation of carboxymethyluridine in the wobble base at position 34 in tRNAs.
messages: Component of the elongator complex which consists of ELP1/ELO2, ELP2, ELP3/ELO3, ELP4/ELO1, ELP5, and ELP6 (PubMed:20080602). Interacts with IYO (PubMed:21620701).
messages: Cytoplasm
messages: Expressed in meristematic tissues of in roots, leaves, seedlings, cotyledons, floral buds and shoot apices (PubMed:15894610, PubMed:20080602, PubMed:23969312). Expressed in the shoot meristem and the emerging leaves immediately after germination (PubMed:23969312). In the root, expressed in the transition zone and the upper meristematic zone (PubMed:23969312).
messages: Nucleus
messages: Slow growing rate associated with pale-green and downwardly curled narrow leaves and reduced root growth that results from a decreased cell division rate and a reduced apical dominance. Defect in tRNA wobble uridine modification. Filamentous leaves with abaxialized epidermis in AS2 defective plants.
messages: The elongator complex was originally thought to play a role in transcription elongation. However, it is no longer thought to play a direct role in this process and its primary function is thought to be in tRNA modification.

3702:AT4G26250
gene id: 3702:AT4G26250
uniprot id: A0A654FSV8
uniprot id: Q8H1S1
uniprot id: W8PV51
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Belongs to the glycosyltransferase 8 family. Galactosyltransferase subfamily.
messages: Cytoplasm
messages: Galactinol synthase involved in the biosynthesis of raffinose family oligosaccharides (RFOs) that function as osmoprotectants. May promote plant stress tolerance (By similarity).

3702:AT2G24150
gene id: 3702:AT2G24150
uniprot id: A0A1P8B2N4
uniprot id: A0A7G2EBE5
uniprot id: Q9ZUH8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ADIPOR family.
messages: Expressed in roots and flowers.
messages: May play a role in abiotic stress response.
messages: Membrane

3702:AT2G39960
gene id: 3702:AT2G39960
uniprot id: A0A178VMY0
uniprot id: P58684
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SPCS2 family.
messages: Component of the signal peptidase complex (SPC) composed of a catalytic subunit SEC11 and three accessory subunits SPCS1, SPCS2 and SPCS3. The complex induces a local thinning of the ER membrane which is used to measure the length of the signal peptide (SP) h-region of protein substrates. This ensures the selectivity of the complex towards h-regions shorter than 18-20 amino acids.
messages: Component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (By similarity). Enhances the enzymatic activity of SPC and facilitates the interactions between different components of the translocation site (By similarity).
messages: Component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Enhances the enzymatic activity of SPC and facilitates the interactions between different components of the translocation site.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G05520
gene id: 3702:AT2G05520
uniprot id: Q9SL15
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRP family.
messages: By salicylic acid. Transient induction by drought. Up-regulated by itself.
messages: GRP3 and GRP3S bind to WAK1, WAK3 and WAK5, but GRP2, GRP4,GRP6, GRP7 and GRP8 did not bind to any of the WAK isoforms.
messages: Interacts (via Cys-rich C-terminus) with WAK1 (via the extracellular domain). Component of a 500 kDa complex, composed of GRP3 or GRP3-S, WAK1 and KAPP.
messages: Predominantly expressed in leaves and stems.
messages: Regulates the function of the receptor protein kinase WAK1, and namely the phosphorylation of OEE2.
messages: The Cys-rich C-terminus (111-145) is essential for the interaction with WAK1.
messages: extracellular matrix

3702:AT5G06480
gene id: 3702:AT5G06480
uniprot id: A0A178UM37
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G33530
gene id: 3702:AT2G33530
uniprot id: Q8VY01
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Probable carboxypeptidase.
messages: Secreted
messages: Ubiquitous.

3702:AT3G17760
gene id: 3702:AT3G17760
uniprot id: A0A178VFR2
uniprot id: Q9LSH2
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the group II decarboxylase family.
messages: Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity).
messages: Expressed in flowers.
messages: Homohexamer. Interacts with calmodulin (By similarity).

3702:AT3G29400
gene id: 3702:AT3G29400
uniprot id: Q9LIA2
names: Function
names: Similarity
messages: Belongs to the EXO70 family.
messages: Component of the exocyst complex.

3702:AT5G57330
gene id: 3702:AT5G57330
uniprot id: A0A178UC08
uniprot id: Q9LVC5
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

3702:AT2G41710
gene id: 3702:AT2G41710
uniprot id: A0A1P8B1K7
uniprot id: F4IL00
uniprot id: Q8GWK2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G17970
gene id: 3702:AT2G17970
uniprot id: Q9SL49
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Interacts with the capsid protein ORF3b of the alfalfa mosaic virus (AMV).
messages: Belongs to the alkB family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cytoplasmic granule
messages: Dioxygenase that demethylates RNA by oxidative demethylation: specifically demethylates N(6)-methyladenosine (m6A) RNA, the most prevalent internal modification of messenger RNA (mRNA) in higher eukaryotes (PubMed:28923956). Modulates viral infection of the alfalfa mosaic virus (AMV) and the m6A abundance in its genomic RNAs (PubMed:28923956).
messages: P-body

3702:AT1G13330
gene id: 3702:AT1G13330
uniprot id: A0A178WCC4
uniprot id: Q9FX64
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HOP2 family.
messages: Expressed in vegetative and reproductive tissues. Found in seedlings, leaves and flowers.
messages: Interacts with MND1 and MIP1.
messages: Involved in bivalent formation and segregation of homologous chromosomes in meiosis.
messages: Nucleus
messages: Sterility due to failure of both male and female gametophyte development.

3702:AT1G15180
gene id: 3702:AT1G15180
uniprot id: A0A654EA48
uniprot id: B3H701
uniprot id: Q94AL1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT3G51470
gene id: 3702:AT3G51470
uniprot id: A0A178VD67
uniprot id: A0A384LDJ2
uniprot id: A0A7G2EVV0
uniprot id: Q9SD02
names: Caution
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G25610
gene id: 3702:AT4G25610
uniprot id: A0A384LH20
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G73720
gene id: 3702:AT1G73720
uniprot id: A0A178WHG8
uniprot id: Q8W117
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxiliary spliceosomal protein involved in splicing of specific pre-mRNAs that affect multiple aspects of development. Required for proper accumulation of SMU2.
messages: Belongs to the WD repeat SMU1 family.
messages: Component of the spliceosome B complex (By similarity). Interacts with SMU2 (PubMed:19734266).
messages: Expressed in actively dividing cells, such as newly emerged leaves and root tips. Detected in embryo, female gametophyte including egg cell, central cell, synergid cells and the antipodal cells, and mature pollen.
messages: Lethal when homozygous.
messages: Nucleus

3702:AT3G05360
gene id: 3702:AT3G05360
uniprot id: Q9MA83
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Induced by microbe-associated molecular patterns (MAMPs) such as LPS, HrpZ, flg22 and oomycete-(NPP1) (PubMed:18434605). Accumulates upon infection by the soil-borne necrotrophic pathogen F.oxysporum f. sp. lentis and associated with nitric oxide (NO) production; this induction is prevented by the plant growth promoting saprophytic fungus T.asperelloides (PubMed:24283937). Induced by NaCl and mannitol (PubMed:27099374).
messages: Receptor for microbe-associated molecular patterns (MAMPs) that induces a BAK1-dependent basal immune response to necrotrophic fungi (e.g. S.sclerotiorum) in the presence of MAMPs (e.g. flg22 and SCLEROTINIA CULTURE FILTRATE ELICITOR1 (SCFE1) from the necrotrophic fungal pathogen S. sclerotiorum). Functionality seems to depend on the presence of the receptor kinase SOBIR1 as an adapter protein (PubMed:24104566). Required for full non-host resistance to bacterial pathogens (e.g. P.syringae pv phaseolicola) (PubMed:18434605).
messages: Reduced basal defense leading to an increased susceptibility to the non-host bacteria such as P.syringae pv phaseolicola (Psp 1448A) (PubMed:18434605). Increased susceptibility to S.sclerotiorum strain 1980 and to the related fungus B.cinerea. Impaired SCLEROTINIA CULTURE FILTRATE ELICITOR1- (SCFE1) and flg22-dependent ethylene production (PubMed:24104566).

3702:AT4G39200
gene id: 3702:AT4G39200
uniprot id: A0A178UWL1
uniprot id: B3H4B6
uniprot id: Q9T029
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS25 family.

3702:AT2G18120
gene id: 3702:AT2G18120
uniprot id: A0A1P8AXA0
uniprot id: Q9SI19
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SHI protein family.
messages: Expressed in cotyledon tips, leaf primordia, hydathodes, stipules, and lateral root primordia and weakly at the edges of petals and sepals.
messages: No visible phenotype.
messages: Nucleus
messages: Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM).

3702:AT1G02475
gene id: 3702:AT1G02475
uniprot id: Q94K52
names: Function
names: Similarity
names: Subunit
messages: Belongs to the COQ10 family.
messages: Interacts with coenzyme Q.
messages: Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.

3702:AT5G08390
gene id: 3702:AT5G08390
uniprot id: A0A5S9Y2I7
uniprot id: F4KB17
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat KATNB1 family.
messages: Component of KTN80-KTN1 complexes composed of a hexamer of KTN1-KTN80 heterodimers that sense microtubule (MT) geometry to confer precise MT severing (PubMed:28978669). Interacts directly with AAA1/KTN1 and KTN80.1, and weakly with KTN80.4 (PubMed:28978669).
messages: Expressed in siliques, flowers, leaves, stems and roots.
messages: May participate in a complex which severs microtubules in an ATP-dependent manner (By similarity). Microtubule severing may promote rapid reorganization of cellular microtubule arrays (By similarity). Confers precision to microtubule (MT) severing by specific targeting of KTN1 to MT cleavage sites such as crossover or branching nucleation sites (PubMed:28978669). Together with other KTN80s, regulates cell elongation by modulating MT organization (PubMed:28978669).
messages: May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
messages: The double mutant ktn80.3 ktn80.4 exhibits normal growth, but the quadruple mutant ktn80.1 ktn80.2 ktn80.3 ktn80.4 has a severe dwarf phenotype, with small and round dark-green rosette leaves as well as wide and short petioles, probably due to cell elongation defects, and associated with a complex cortical microtubule (MT) network with stable entanglements (PubMed:28978669). Plants missing KTN80s have a disruption of KTN1 recruitment at MT crossover or branching nucleation sites, leading to an abolishment of MT severing (PubMed:28978669).
messages: cytoskeleton

3702:AT3G01140
gene id: 3702:AT3G01140
uniprot id: Q9LE63
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in trichomes, stems, carpels, petals and stamens.
messages: Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067).
messages: Nucleus
messages: Overbranched trichomes.

3702:AT1G21320
gene id: 3702:AT1G21320
uniprot id: F4HWF9
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Alternative splicing (AS) regulator that binds to specific mRNAs and modulates auxin effects on the transcriptome. Displaced from its targets upon binding to AS competitor long non-coding RNA (ASCO-RNA).
messages: Isoform 1: Expressed in root meristems, lateral root primordia, root vascular tissues and cotyledon vascular tissues. Isoform 2: Expressed in root meristems, lateral root primordia and root vascular tissues.
messages: No visible phenotype. Nsra and nsrb double mutants are less sensitive to auxin.
messages: Nucleus speckle
messages: Up-regulated by auxin treatment.

3702:AT5G05010
gene id: 3702:AT5G05010
uniprot id: A0A654FYU7
uniprot id: B9DGK9
uniprot id: Q93Y22
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes medium subunit family. Delta-COP subfamily.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3702:AT3G05970
gene id: 3702:AT3G05970
uniprot id: A0A5S9X9I0
uniprot id: Q8LPS1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation (Probable). Preferentially uses palmitate, palmitoleate, oleate, linoleate and eicosenoate as substrates (PubMed:12177484, PubMed:12366803). Can use myristate and linolenate as substrates (PubMed:12366803). May play a regulatory role both in fatty acid import into glyoxysomes and in fatty acid beta-oxidation (PubMed:12481085). Functions redundantly with LACS7 in lipid mobilization for beta-oxidation during seed germination, which is essential for postgerminative growth and seedling establishment (PubMed:14742880, PubMed:16844736).
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.
messages: Expressed in roots, stems, leaves flowers and germinating seedling (PubMed:12177484). Preferentially expressed in seeds and senescent leaves.
messages: Glyoxysome membrane
messages: Induced during seed germination.
messages: Peroxisome
messages: Seedlings of the lacs6 and lacs7 double mutant were arrested in postgerminative growth due to inability to mobilize fatty acids for beta-oxidation, a necessary process to pursue the development.
messages: Up-regulated by ozone.

3702:AT5G44870
gene id: 3702:AT5G44870
uniprot id: O48573
names: Domain
names: Function
names: Induction
names: Miscellaneous
messages: Plants over-expressing LAZ5 exhibit hypersensitive cell death and do not survive (PubMed:20949080). In the ecotype Estland (Est), which shows a sensitive response upon tobacco ringspot virus (TRSV) inoculation, the TTR1 allele is involved in the development of lethal systemic necrosis in response to TRSV (PubMed:22057987).
messages: TIR-NB-LRR receptor-like protein that may play a role in plant innate immunity. May trigger hypersensitive programmed cell death in response to pathogen attack (PubMed:20949080). Involved in tolerance to tobacco ringspot virus (TRSV) (PubMed:22057987).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.
messages: Up-regulated by ASHH2 via epigenetic chromatin H3K36me3 regulation during the vegetative development.

3702:AT2G22590
gene id: 3702:AT2G22590
uniprot id: Q940V3
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G06550
gene id: 3702:AT1G06550
uniprot id: A0A5S9SY24
uniprot id: Q9SHJ8
names: Function
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism.

3702:AT5G02530
gene id: 3702:AT5G02530
uniprot id: Q8L719
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ALYREF family.
messages: Export adapter involved in nuclear export of spliced and unspliced mRNA.
messages: Interacts with RH15 and RH56.
messages: nucleoplasm

3702:AT1G11905
gene id: 3702:AT1G11905
uniprot id: A0A178WH31
uniprot id: F4IAJ8
uniprot id: Q8L702
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.

3702:AT4G33980
gene id: 3702:AT4G33980
uniprot id: Q8L983
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Nucleus
messages: Period lengthening of various circadian output rhythms and affected central clock gene expression (PubMed:27837007). Derepressed expression of circadian-regulated and cold-responsive genes (PubMed:27990760). Delayed flowering under long days conditions, and slightly in short days (PubMed:27837007). Increased freezing tolerance (PubMed:27837007).
messages: Regulated by the circadian clock at warm growth temperatures as direct targets of CCA1, with highest levels from noon to dusk (PubMed:27837007, PubMed:27990760). Repressed by CCA1 at the transcription level via chromatin binding and in a temperature-dependent way (PubMed:27837007, PubMed:27990760). Induced by cold (PubMed:12172015, PubMed:16121258, PubMed:27837007). Induced by abscisic acid (ABA) (PubMed:17304219). Transcription is repressed by blue and red lights, but induced by darkness; by contrast, present at low levels in darkness but accumulates in blue light (at protein level) due to transcription auto-repression (PubMed:27837007).
messages: Together with COR27, involved in central circadian clock regulation and in flowering promotion, by binding to the chromatin of clock-associated evening genes TOC1, PRR5, ELF4 and cold-responsive genes in order to repress their transcription (PubMed:27837007, PubMed:27990760). Negative regulator of freezing tolerance (PubMed:27837007).

3702:AT3G47400
gene id: 3702:AT3G47400
uniprot id: A0A7G2EUL4
uniprot id: Q9STY3
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in siliques.
messages: Expressed throughout silique development.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT5G24410
gene id: 3702:AT5G24410
uniprot id: A0A178UFN1
uniprot id: Q9FIN1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
messages: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
messages: cytosol

3702:AT3G56020
gene id: 3702:AT3G56020
uniprot id: A0A654EIW4
uniprot id: P62120
uniprot id: Q682R5
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein eL41 family.
messages: Component of the large ribosomal subunit.

3702:AT1G28160
gene id: 3702:AT1G28160
uniprot id: A0A7G2DZX5
uniprot id: Q9FZ90
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G35710
gene id: 3702:AT2G35710
uniprot id: A0A178VQ31
uniprot id: Q8VZP6
names: Caution
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family. Glycogenin subfamily.
messages: Membrane
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G49100
gene id: 3702:AT5G49100
uniprot id: A0A178UH40
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G25090
gene id: 3702:AT5G25090
uniprot id: A0A178U9R8
uniprot id: Q8LC95
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the early nodulin-like (ENODL) family.
messages: Cell membrane
messages: In flowers, expressed only in developing ovules (e.g. in egg cells).
messages: May act as a carbohydrate transporter (PubMed:24470637). Required, together with ENODL11, ENODL12, ENODL13, ENODL14 and ENODL15, for male-female communication and pollen tube reception and burst at the synergid cell surface of the female gametophyte (PubMed:27524487).
messages: Mostly expressed in seedlings, siliques and flowers, and, to a lower extent, in roots, stems and seeds, but barely in leaves.
messages: No visible phenotype (PubMed:27524487). Plants lacking ENODL11, ENODL12, ENODL13, ENODL14 and ENODL15 have a reduced seed set due to aborted ovules as a result of pollen tubes failling to rupture and release their sperm cell cargo (PubMed:27524487).

3702:AT3G24850
gene id: 3702:AT3G24850
uniprot id: Q9LRX6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G10250
gene id: 3702:AT4G10250
uniprot id: Q38806
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small heat shock protein (HSP20) family.
messages: By heat shock.
messages: Endoplasmic reticulum
messages: May form oligomeric structures.

3702:AT1G17560
gene id: 3702:AT1G17560
uniprot id: A0A1P8AQK3
uniprot id: A0A5S9UV75
uniprot id: Q84JG5
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA in mitochondrion (By similarity). Required for the formation of the proximal region of the ovule primordium during floral organogenesis, thus participating in patterning and growth of ovule. Also regulates the initiation and/or maintenance of integument and embryo sac ontogenesis. Prevents inappropriate cell death in the young ovule.
messages: By brassinosteroid (BR), repressed by the BR biosynthesis inhibitor brassinazole (BRZ).
messages: Female-sterility due to abnormal gynoecium and ovule growth and development with highly reduced integuments and collapsed cells in the distal regions of the ovule primordia. Slight reduction in the rate of growth and size of the pistil.
messages: Mitochondrion
messages: Mostly expressed in pistils and inflorescences, including floral organs and meristems, and, to a lower extent, in leaves.
messages: Part of the mitochondrial 50S ribosomal subunit.

3702:AT3G46670
gene id: 3702:AT3G46670
uniprot id: Q9SNB1
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses low quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro.

3702:AT4G32120
gene id: 3702:AT4G32120
uniprot id: Q94A05
uniprot id: W8Q6I0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 31 family.
messages: Expressed in roots, rosette leaves, cauline leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth.
messages: Reduced levels of arabinogalactan proteins.

3702:AT2G21890
gene id: 3702:AT2G21890
uniprot id: Q9SJ10
names: Cofactor
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed in the root tips. Expressed in the apical meristematic regions, leaf veins and at the base of the trichomes. Expressed at the base of the stems. Expressed in the abscission zones of newly formed siliques.
messages: Homodimer.
messages: Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

3702:AT5G09950
gene id: 3702:AT5G09950
uniprot id: A0A1P8BCH0
uniprot id: Q9FIB2
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT3G53970
gene id: 3702:AT3G53970
uniprot id: A0A178VB57
uniprot id: A0A384KYJ5
uniprot id: F4JBP8
uniprot id: Q9M330
names: Caution
names: Function
names: Similarity
messages: Belongs to the proteasome inhibitor PI31 family.
messages: Could play an important role in control of proteasome function. Inhibits the hydrolysis of protein and peptide substrates by the 20S proteasome (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G26240
gene id: 3702:AT2G26240
uniprot id: A0A178W0J8
uniprot id: O64847
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM14 family.
messages: For all TMEM14 proteins, 4 hydrophobic alpha-helical domains are predicted. However, NMR structure determination of the human TMEM14A showed that only 3 of these helices are membrane-spaning while the amphiphilic N-terminal helix is probably located at the lipid micelle-water interface.
messages: May be involved in free fatty acids export.
messages: Membrane

3702:AT3G49620
gene id: 3702:AT3G49620
uniprot id: Q8H113
names: Cofactor
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By dark.
messages: Expressed in senescent leaves.

3702:AT5G37473
gene id: 3702:AT5G37473
uniprot id: Q2V329
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G14430
gene id: 3702:AT5G14430
uniprot id: A0A178UH64
uniprot id: F4K6T0
uniprot id: Q8VZV7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT3G05500
gene id: 3702:AT3G05500
uniprot id: A0A178VB80
uniprot id: A0A1I9LN84
uniprot id: Q9MA63
names: Similarity
messages: Belongs to the REF/SRPP family.

3702:AT5G65820
gene id: 3702:AT5G65820
uniprot id: Q9FH87
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G50260
gene id: 3702:AT3G50260
uniprot id: A0A178VN80
uniprot id: Q9SNE1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G16500
gene id: 3702:AT5G16500
uniprot id: Q1PDW3
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in mature pollen and in germinating pollen tubes.
messages: Interacts with PRK6.
messages: Involved in pollen tube guidance into micropyle. Participates in perception of the ovule-secreted peptide signal LURE1.
messages: No visible phenotype. Lip1 and lip2 double mutants have a reduced male transmission.
messages: Palmitoylated.

3702:AT4G10240
gene id: 3702:AT4G10240
uniprot id: O82617
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor that may be involved in seedling photomorphogenesis.

3702:AT1G23350
gene id: 3702:AT1G23350
uniprot id: A0A178W564
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G58970
gene id: 3702:AT3G58970
uniprot id: A0A178VB54
uniprot id: Q93ZD7
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.
messages: Expressed in the whole plant except roots.
messages: Has the ability to complement a mutant in yeast lacking magnesium transport capability.
messages: Magnesium transporter that may mediate the influx of magnesium.
messages: Membrane

3702:AT5G42300
gene id: 3702:AT5G42300
uniprot id: Q9FGZ9
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT1G37150
gene id: 3702:AT1G37150
uniprot id: F4I4W1
uniprot id: F4I4W2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the biotin--protein ligase family.
messages: Cytoplasm
messages: Highly expressed in seeds. Expressed in roots, leaves, stems, flowers and siliques.
messages: No visible phenotype under normal growth conditions.
messages: Seems to have no or limited implication in biotin-dependent carboxylase biotinylation in planta.

3702:AT3G26680
gene id: 3702:AT3G26680
uniprot id: A0A1I9LSS2
uniprot id: A0A5S9XFW9
uniprot id: Q38961
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DNA repair metallo-beta-lactamase (DRMBL) family.
messages: Induced by bleomycin, methyl methane sulphonate and hydrogen peroxide, which are known to induce oxidative lesions in DNA. Also induced by bacterial flagellin, which is known to elicit plant defense responses and a rapid oxidative burst, and by xylanase.
messages: May be required for repair of DNA lesions formed after exposure to oxidative stress.
messages: Nucleus

3702:AT4G34030
gene id: 3702:AT4G34030
uniprot id: A0A178UTZ4
uniprot id: Q9LDD8
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AccD/PCCB family.
messages: Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3-methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism.
messages: In roots, cotyledons, leaves, flowers, ovaries, siliques and embryos.
messages: Mitochondrion matrix
messages: Probably a heterodimer composed of biotin-containing alpha subunits and beta subunits.
messages: Temporal and spatial accumulation of the alpha and beta subunits during development at approximately equal molar ratios.

3702:AT1G10455
gene id: 3702:AT1G10455
uniprot id: A0A178W4P2
uniprot id: Q9XIK5
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G36940
gene id: 3702:AT4G36940
uniprot id: A0A178V5W0
uniprot id: Q8RWM2
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
messages: Activity is highest with Mn(2+).
messages: Belongs to the NAPRTase family.
messages: Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Helps prevent cellular oxidative stress via its role in NAD biosynthesis.
messages: Not regulated in the quinolinate synthase mutant old5 causing increased NAD steady state levels.
messages: Transiently phosphorylated on a His residue during the reaction cycle. Phosphorylation strongly increases the affinity for substrates and increases the rate of nicotinate D-ribonucleotide production. Dephosphorylation regenerates the low-affinity form of the enzyme, leading to product release.

3702:AT1G19700
gene id: 3702:AT1G19700
uniprot id: A0A654EBF2
uniprot id: Q9FXG8
names: Domain
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TALE/BELL homeobox family.
messages: Interacts with TLP1. May form heterodimeric complexes with TALE/KNOX proteins (By similarity). Interacts with OFP1, OFP2, OFP4 and OFP5.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.

3702:AT1G23000
gene id: 3702:AT1G23000
uniprot id: A2RVM8
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT1G23970
gene id: 3702:AT1G23970
uniprot id: Q94A88
names: Miscellaneous
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.
messages: May be due to a competing donor splice site.

3702:AT5G16740
gene id: 3702:AT5G16740
uniprot id: Q9LFE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.5) subfamily.
messages: Membrane

3702:AT4G21930
gene id: 3702:AT4G21930
uniprot id: A0A654FS04
uniprot id: Q8L864
names: Similarity
messages: Belongs to the senescence regulator S40 family.

3702:AT3G50440
gene id: 3702:AT3G50440
uniprot id: Q8S9K8
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Methylesterase shown to have methyl jasmonate (MeJA) esterase activity in vitro.

3702:AT1G78580
gene id: 3702:AT1G78580
uniprot id: Q9SYM4
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cytoplasm
messages: Embryonic lethality.
messages: Expressed in seedlings, leaves, roots, stems, flowers and siliques.
messages: In the C-terminal section; belongs to the trehalose phosphatase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 20 family.
messages: Low induction by sucrose after 24 hours. Down-regulated by dark incubation.
messages: Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development.
messages: The N-terminal part (1-88) has an inhibitory function on the enzymatic activity.
messages: Up-regulated during seed development.
messages: Vacuole
messages: cell wall

3702:AT3G57080
gene id: 3702:AT3G57080
uniprot id: A0A5S9XLJ5
uniprot id: Q9M1J2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the archaeal Rpo5/eukaryotic RPB5 RNA polymerase subunit family.
messages: Component of the RNA polymerase V complex.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase V involved in RNA-directed DNA methylation-dependent (RdDM) silencing of endogenous repeated sequences, including transposable elements. Required for establishment of DNA methylation.
messages: Expressed in roots, leaves, siliques and seeds, and to a lower level, in flower buds and flowers.
messages: Nucleus
messages: Partial loss of methylation and silencing of RdDM targets, probably due to the redundancy with NRPE5B.

3702:AT3G22930
gene id: 3702:AT3G22930
uniprot id: Q9LIK5
names: Function
names: Similarity
messages: Belongs to the calmodulin family.
messages: Potential calcium sensor.

3702:AT3G54990
gene id: 3702:AT3G54990
uniprot id: C0SVE8
uniprot id: Q6PV68
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: 'Schlafmuetze' means 'nightcap' in German.
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Repressor of flowering.
messages: Repressed by miR172 after photoperiod changement.

3702:AT5G14790
gene id: 3702:AT5G14790
uniprot id: A0A178UAC1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G43470
gene id: 3702:AT5G43470
uniprot id: Q8W4J9
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Polymorphism
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the disease resistance NB-LRR family. RPP8/HRT subfamily.
messages: By salicylic acid (SA) (PubMed:22072959, PubMed:20831409). Induced by Hyaloperonospora arabidopsidis, benzothiadiazole (BTH) and wounding (PubMed:20831409). Degraded in darkness and in blue-light (PubMed:20624951).
messages: Cell membrane
messages: Disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. The interaction with TIP (TCV-interacting protein) may be essential for the recognition of the avirulence proteins, and the triggering of the defense response. Triggers resistance to turnip crinkle virus (TCV) via a SAG101-dependent pathway.
messages: Has been shown to exist only in cv. Columbia so far.
messages: In cv. Columbia and cv. Landsberg erecta, RPP8 specifically recognizes the Emco5 avirulence protein from Hyaloperonospora parasitica, while it is not the case in cv. Di-17, where it confers resistance to Turnip Crinkle Virus upon recognition of the viral capsid protein.
messages: Interacts with the NAC protein TIP (PubMed:11041886). Interacts with MORC1/CRT1 (PubMed:18191794, PubMed:20332379). Interacts with COP1 and is subsequently degraded in a 26s proteasome dependent manner (PubMed:20624951).
messages: Mostly expressed in leaves, and, to a lower extent, in roots.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.
messages: The strong polymorphisms present in cv. Di-17 and cv. Columbia are probably due to an unequal crossing-over between the highly related RPP8 and RPH8A genes present in cv. Landsberg erecta. Such variations probably modify the specificity of pathogen recognition.

3702:AT2G45810
gene id: 3702:AT2G45810
uniprot id: A0A654F2A0
uniprot id: Q94BV4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping.
messages: Belongs to the DEAD box helicase family.
messages: Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily.
messages: P-body
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT5G22660
gene id: 3702:AT5G22660
uniprot id: Q9FNJ5
names: Miscellaneous
names: Sequence Caution
messages: May be due to an intron retention.
messages: Sequencing errors.

3702:AT5G47200
gene id: 3702:AT5G47200
uniprot id: Q9FPJ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Golgi apparatus membrane
messages: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER) (By similarity).
messages: trans-Golgi network membrane

3702:AT2G26010
gene id: 3702:AT2G26010
uniprot id: A0A178VSS6
uniprot id: O80995
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Confers broad-spectrum resistance to pathogens. Has antifungal activity in vitro.
messages: Secreted

3702:AT5G17770
gene id: 3702:AT5G17770
uniprot id: A0A178US77
uniprot id: Q9ZNT1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: Expressed in roots, stems, flowers and siliques. Detected in leaves.
messages: Mitochondrion outer membrane
messages: Monomer. Interacts with AKR2A (PubMed:20215589).
messages: Reductase transferring electrons from NADH to cytochrome b5. Required for the NADH-dependent electron transfer involved in the desaturation and hydroxylation of fatty acids and in the desaturation of sterol precursors. No activity with NADPH as electron donor.

3702:AT3G62810
gene id: 3702:AT3G62810
uniprot id: A0A384KE42
uniprot id: Q9LZI4
names: Subcellular Location Annotation
messages: Mitochondrion matrix

3702:AT1G60810
gene id: 3702:AT1G60810
uniprot id: O22718
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. May supply substrate to the cytosolic acetyl-CoA carboxylase, which generates the malonyl-CoA used for the synthesis of a multitude of compounds, including very long chain fatty acids and flavonoids. Required for normal growth and development and elongation of C18 fatty acids to C20 to C24 fatty acids in seeds. In contrast to all known animal ACL enzymes having a homomeric structure, plant ACLs are composed of alpha and beta chains (By similarity).
messages: Belongs to the succinate/malate CoA ligase beta subunit family.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: cytosol

3702:AT4G18210
gene id: 3702:AT4G18210
uniprot id: O49725
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT1G08845
gene id: 3702:AT1G08845
uniprot id: A0A384LLI2
uniprot id: F4HXR7
uniprot id: Q8GW22
names: Similarity
messages: Belongs to the universal ribosomal protein uL18 family.

3702:AT4G32890
gene id: 3702:AT4G32890
uniprot id: A0A654FVA0
uniprot id: O82632
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT2G21610
gene id: 3702:AT2G21610
uniprot id: A0A384LB06
uniprot id: Q9SIJ9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G13580
gene id: 3702:AT4G13580
uniprot id: Q9T0H8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT3G21360
gene id: 3702:AT3G21360
uniprot id: Q9LIG0
names: Cofactor
names: Miscellaneous
messages: Binds 1 Fe cation per subunit.
messages: May use 2-oxoglutarate as a cosubstrate.

3702:AT5G45360
gene id: 3702:AT5G45360
uniprot id: Q9FHK0
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT1G64820
gene id: 3702:AT1G64820
uniprot id: Q1PFG9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:ArthCp019
gene id: 3702:ArthCp019
uniprot id: A0A1B1W4U3
uniprot id: P56790
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbZ family.
messages: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.
messages: May control the interaction of photosystem II (PSII) cores with the light-harvesting antenna, regulates electron flow through the 2 photosystem reaction centers. PSII is a light-driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3702:AT2G47930
gene id: 3702:AT2G47930
uniprot id: Q94F57
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: O-glycosylated on the hydroxyproline residues.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT5G15630
gene id: 3702:AT5G15630
uniprot id: A0A178UK60
uniprot id: A0A1P8BE64
uniprot id: A0A1P8BE86
uniprot id: A0A384LH43
uniprot id: A0A5S9Y4Z5
uniprot id: Q9LFW3
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the COBRA family.
messages: Cell membrane
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G64065
gene id: 3702:AT1G64065
uniprot id: Q6DST1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LEA type 2 family.
messages: Membrane

3702:AT3G63480
gene id: 3702:AT3G63480
uniprot id: Q8GW44
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-1 subfamily.
messages: Homodimer. Interacts with WIP1 and WIP2.
messages: Kinesin-like motor protein that promotes synapsis and is required for proper crossover distribution in meiosis (PubMed:25330379). Plays a role in the nuclear division cycles during megagametogenesis (PubMed:24667993).
messages: Partial seed abortion due to defects in megagametogenesis (PubMed:24667993, PubMed:25330379). Defects in pollen viability (PubMed:25330379).
messages: Specifically expressed in ovules and anthers.

3702:AT2G38180
gene id: 3702:AT2G38180
uniprot id: A0A178VUP2
uniprot id: O80443
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Lacks the conserved active site 'GDSL' motif. Its enzyme activity is therefore unsure.
messages: Secreted

3702:AT2G38600
gene id: 3702:AT2G38600
uniprot id: Q9ZVI2
names: Function
names: Similarity
messages: Belongs to the APS1/VSP family.
messages: May function as somatic storage protein during early seedling development.

3702:AT5G64290
gene id: 3702:AT5G64290
uniprot id: A0A178UKA0
uniprot id: Q9FMF7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. DIT1 subfamily.
messages: Expressed in roots, rosette and cauline leaves, stems, flowers and siliques.
messages: Glutamate/malate translocator involved with DIT1 in primary ammonia assimilation and in the re-assimilation of ammonia generated by the photorespiratory pathway. Exports the end product of ammonia assimilation, glutamate, from plastids to the cytosol. The precursor for ammonia assimilation, 2-oxoglutarate, is imported from the cytosol by DIT1.
messages: Membrane
messages: Non-viable seedlings under normal atmospheric conditions, but grow normally under non-photorespiratory conditions high CO(2) conditions.
messages: chloroplast inner membrane

3702:AT1G21110
gene id: 3702:AT1G21110
uniprot id: Q9LPU6
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
messages: Involved in indole glucosinolate biosynthesis. Catalyzes methoxylation reactions of the glucosinolate indole ring. Converts the hydroxy intermediates 4-hydroxy-indol-3-yl-methylglucosinolate (4OH-I3M) and 1-hydroxy-indol-3-yl-methylglucosinolate (1OH-I3M) to 4-methoxy-indol-3-yl-methylglucosinolate (4MO-I3M) and 1-methoxy-indol-3-yl-methylglucosinolate(1MO-I3M), respectively.

3702:AT4G05590
gene id: 3702:AT4G05590
uniprot id: A0A178UZ36
uniprot id: A0A1P8B966
uniprot id: Q8LD38
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Abscisic acid (ABA) hypersensitivity of stomatal movements and enhanced drought tolerance.
messages: Abundant in leaf and particularly in the guard cells.
messages: Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.
messages: By abscisic acid (ABA) and drought stress.
messages: May be due to an intron retention.
messages: Mediates the uptake of pyruvate into mitochondria.
messages: Mediates the uptake of pyruvate into mitochondria. Negatively regulates ABA-induced guard cell signaling and mediates drought stress responses.
messages: Membrane
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT2G33870
gene id: 3702:AT2G33870
uniprot id: Q1PEX3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT1G65700
gene id: 3702:AT1G65700
uniprot id: A0A178W8C1
uniprot id: F4IBJ7
uniprot id: Q8VYI0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the snRNP Sm proteins family.
messages: Component of the heptameric LSM2-LSM8 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM8, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM8 subunit interacts only with its two neighboring subunits, LSM2 and LSM4 (PubMed:23221597). Interacts with the prefoldin co-chaperone subunits PFD1, PFD2, PFD3, PFD4, PFD5 and PFD6 (PubMed:32396196).
messages: Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs). LSM8 is essential for the formation of the nuclear LSM2-LSM8 complex involved in the accurate splicing of selected development-related mRNAs through the stabilization of the spliceosomal U6 snRNA (PubMed:32396196). Plays a critical role in the regulation of development-related gene expression.
messages: Developmental alterations, such as reduced root length, alterations in the shape and number of cotyledons, small rosette leaves with short petioles, early flowering, short siliques with reduced seed number and frequently aborted seeds (PubMed:23221597). Lower pre-mRNA splicing events and reduced levels of U6 snRNA, but elevated levels of U4 snRNA (PubMed:32396196).
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: LSm subunits form a heteromer with a doughnut shape.
messages: Nucleus
messages: Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.

3702:AT5G07010
gene id: 3702:AT5G07010
uniprot id: A0A178UG65
uniprot id: Q8L5A7
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Expressed in leaves.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to specifically catalyze the sulfate conjugation of hydroxyjasmonates, with a preference for 12-hydroxyjasmonate over 11-hydroxyjasmonate. No activity with 12-hydroxyjasmonic acid methyl ester, cucurbic acid, 7-iso-cucurbic acid, 6-epi-cucurbic acid, 6-epi-7-iso-cucurbic acid and their methyl esters, prostaglandin E2, arachidonyl alcohol and 11-eicosenol.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by methyljasmonate, 12 hydroxyjasmonate and 12-oxo-phytodienoic acid, but not by hormones.

3702:AT5G23240
gene id: 3702:AT5G23240
uniprot id: Q9FMX6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Altered root hair development and reduced hair length.
messages: Belongs to the DnaJ family.
messages: Expressed in roots, exclusively in the stele.
messages: Induced by salt stress.
messages: May function together with HSC70 chaperone to assist protein folding and prevent protein aggregation during salt stress in the chloroplast (Probable). Involved in root development. Required for the position-dependent cell fate determination during root hair development (PubMed:25339971).
messages: chloroplast

3702:AT3G21240
gene id: 3702:AT3G21240
uniprot id: Q9S725
names: Domain
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Both substrate-binding domains (SBD1 and SBD2) are involved in the substrate recognition, and are sufficient to confer the substrate specificity.
messages: By wounding, UV irradiation, and pathogen attack.
messages: Preferentially expressed in roots.
messages: Produces CoA thioesters of a variety of hydroxy- and methoxy-substituted cinnamic acids, which are used to synthesize several phenylpropanoid-derived compounds, including anthocyanins, flavonoids, isoflavonoids, coumarins, lignin, suberin and wall-bound phenolics (PubMed:10417722). Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioesters (By similarity).

3702:AT2G17670
gene id: 3702:AT2G17670
uniprot id: A0A654EV80
uniprot id: Q84J71
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G44240
gene id: 3702:AT5G44240
uniprot id: A0A654G7R8
uniprot id: F4K8T6
uniprot id: P98205
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
messages: Endoplasmic reticulum membrane
messages: Interacts with ALIS1, ALIS3 and ALIS5 in a heterologous system.
messages: Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Requires an interaction with a protein of the ALIS family for activity. Specific for phosphatidylserine and has no activity with lysolipid, phosphatidylcholine or phosphatidylethanolamine.
messages: Membrane
messages: Prevacuolar compartment membrane
messages: The intracellular targeting signals and lipid specificity determinants reside in the catalytic ALA subunit.

3702:AT2G46870
gene id: 3702:AT2G46870
uniprot id: O82799
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with BRX. Interacts with BZIP30 (PubMed:27402171).
messages: Nucleus
messages: Regulates lateral organ growth. Functionally redundant with NGA2, NGA3 and NGA4.

3702:AT2G34770
gene id: 3702:AT2G34770
uniprot id: A0A178W0P1
uniprot id: O48916
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Binds 2 Zn(2+) ions per subunit that likely form a catalytic dimetal center.
messages: Endoplasmic reticulum membrane
messages: Expressed in leaves, roots, flowers and seeds.
messages: Fatty acid 2-hydroxylase involved in the alpha-hydroxylation of sphingolipid-associated very long-chain fatty acids (VLCFA). Probably involved in the resistance response to oxidative stress.
messages: Interacts with CYTB5-A, CYTB5-B, CYTB5-C and CYTB5-D. Interacts indirectly with BI-1 via CYTB5-D.
messages: Membrane
messages: Up-regulated by H(2)O(2) treatment.

3702:AT4G34000
gene id: 3702:AT4G34000
uniprot id: Q9M7Q3
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family. ABI5 subfamily.
messages: Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.
messages: DNA-binding heterodimer (By similarity). Interacts with ABI3 and the AFP proteins AFP1, AFP2, AFP3 and AFP4.
messages: Defective in ABA and stress responses.
messages: Expressed in roots and flowers.
messages: May be due to intron retention.
messages: Nucleus
messages: Up-regulated by drought, salt, abscisic acid (ABA).

3702:AT1G28030
gene id: 3702:AT1G28030
uniprot id: A0A178W5X5
uniprot id: Q9C7F0
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT4G12480
gene id: 3702:AT4G12480
uniprot id: A0A178V1J0
uniprot id: Q39176
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.
messages: Increased tendency for freezing-induced cellular damage. Reduced cutin accumulation due to lower cutin biosynthesis. Early flowering in long-day conditions.
messages: Induced during germination in embryonic tissues, and strongly expressed in certain parts of young seedlings, in the tips of cotyledons and to a certain degree in developing leaves and roots.
messages: Mostly expressed in aerial part of seedlings, and, to a lower extent, in roots. Higher basal levels in early-flowering ecotypes.
messages: Probable lipid transfer protein (LTP). May improve freezing survival. Seems to control the flowering process and lignin synthesis. Has an auxiliary role for germinability and early seedling development under low temperature and salt stress conditions, probably in an abscisic acid- (ABA) dependent manner. Confers resistance to Botrytis cinerea and exhibits anti-fungal activity, at least against S.cerevisiae, B.cinerea and Fusarium oxysporum, probably by increasing their membrane permeability.
messages: Transient accumulation in response to toxic levels of aluminum (Al). Stably activated by vernalization; vernalization and subsequent growth in long-day photoperiods have an additive or synergistic effect on this activation. Induced by both cold and salt.
messages: cell wall

3702:AT5G14020
gene id: 3702:AT5G14020
uniprot id: A0A1P8BHC4
uniprot id: A0A1P8BHD4
uniprot id: Q0WSL5
names: Similarity
messages: Belongs to the BROX family.

3702:AT2G33550
gene id: 3702:AT2G33550
uniprot id: Q8VZ20
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: EAR motifs are involved in transcriptional repressor activity.
messages: Enhanced disease resistance to virulent bacterial pathogen infection such as P. syringae pv tomato (Pst) DC3000 and P. syringae pv maculicola (Psm) ES4326 associated with immune gene activation.
messages: Homodimer. Interacts directly with MPK4.
messages: Nucleus
messages: Phosphorylated on Thr-189 by MPK4 in response to microbe-associated molecular patterns (MAMPs, e.g. flg22, elf18, chitin, and LPS). This phosphorylation enhances DNA-binding and thus negatively regulates immune gene expression.
messages: Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression.

3702:AT5G20280
gene id: 3702:AT5G20280
uniprot id: A0A384KD86
uniprot id: Q94BT0
uniprot id: W8PUZ7
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activity is regulated by phosphorylation and moderated by concentration of metabolites and light.
messages: Belongs to the glycosyltransferase 1 family.
messages: Circadian-regulated, with the highest expression at the end of the light period and the lowest at the end of the dark period (in 12 hours light/12 hours dark cycle). Induced by cold (at protein level).
messages: Expressed in seeds, stems, rosette leaves, flowers and siliques. Highly expressed in maturing nectaries.
messages: Homodimer or homotetramer.
messages: Loss of nectar secretion accompanied by starch accumulation in nectaries.
messages: Phosphorylated at Ser-152 upon sucrose supply.
messages: Plants silencing SPS1 show reduced shoot growth, leaf fresh weight and dry weight, and decreased leaf starch, leaf sugar levels and sucrose export rates (PubMed:10998187, PubMed:21309792). Tobacco plants overexpressing Arabidopsis SPS1 show increased stem height and diameter, increased total dry weight and elevated concentrations of sink sucrose pools (PubMed:17415671).
messages: Plays a major role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Required for nectar secretion.
messages: Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation.

3702:AT2G17690
gene id: 3702:AT2G17690
uniprot id: Q3EBY8
names: Function
names: Induction
messages: By heat stress.
messages: Involved in heat stress response. Contributes to recovery from heat stress.

3702:AT3G13450
gene id: 3702:AT3G13450
uniprot id: Q9LDY2
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Barely detected in non senescent green leaves, accumulated slightly at the early stage of leaf senescence and strongly expressed at the late stage of leaf senescence.
messages: By dark treatment. Down-regulated by sucrose in a hexokinase dependent manner. Up-regulated by Leucine and its derivative alpha-keto acid (KIC).
messages: Expressed in the non-photosynthetic organs such as siliques, flowers and roots.
messages: Heterotetramer of alpha and beta chains.
messages: Mitochondrion matrix
messages: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). Required during sugar starvation and acts under the control of a sugar-sensing mechanism involving Ser/Thr kinases and phosphatases (PubMed:11080291, PubMed:11917081).

3702:AT1G61580
gene id: 3702:AT1G61580
uniprot id: P22738
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uL3 family.
messages: Cytoplasm

3702:AT2G34880
gene id: 3702:AT2G34880
uniprot id: O64752
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in roots, cotyledons, shoot apex, rosette and cauline leaves, stems, inflorescences and siliques (PubMed:18713399). Expressed at low levels during vegetative growth but to higher levels in young floral organs (PubMed:25009544).
messages: Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3 with a specific activity for H3K4me3 (PubMed:22555401). No activity on H3K4me2, H3K4me1, H3K9me3/2, H3K27me3/2 and H3K36me3/2 (PubMed:22555401). Involved in the control of flowering time by demethylating H3K4me3 at the FLC locus and repressing its expression (PubMed:22555401). The repression of FLC level and reduction in H3K4me3 at the FLC locus results in induction of the flowering activator FT, which is a downstream target of FLC (PubMed:22555401). Promotes salt tolerance by down-regulating the expression of several transcriptions factors involved in stress responses via H3K4me3 and H3K4me2 demethylation (PubMed:25009544).
messages: In seedlings, confined at the base of rosette leaves and in root vascular tissues (PubMed:25009544). Accumulates in pericycle cells precursors of lateral root meristems and remains at the base of growing lateral roots, but not in tips (PubMed:25009544). In the inflorescence, strongly expressed in young anthers and present in carpels (PubMed:25009544). Fades out in mature flowers (PubMed:25009544).
messages: No visible phenotype under normal growth conditions (PubMed:20202164, PubMed:22555401, PubMed:25009544). Increased sensitivity to salt (PubMed:25009544).
messages: Nucleus
messages: Plants over-expressing JMJ15 show early flowering phenotype.
messages: Slightly induced by salt.

3702:AT3G16560
gene id: 3702:AT3G16560
uniprot id: Q9LUS8
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT3G27680
gene id: 3702:AT3G27680
uniprot id: A0A654FBD6
uniprot id: Q9LVX2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G12130
gene id: 3702:AT5G12130
uniprot id: A0A178UPZ0
uniprot id: A0A1P8BDK4
uniprot id: F4JZG9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, rosette and cauline leaves, stems and flowers.
messages: Integral thylakoid membrane protein that plays a crucial role in thylakoid membrane biogenesis and thylakoid formation in early chloroplast development (PubMed:18429937). Is essential for de novo synthesis of photosystem II (PSII) core proteins and required for efficient insertion of thylakoid membrane proteins, presumably via interaction with ALB3. May assist synthesis of thylakoid membrane proteins at the membrane insertion step (PubMed:24612058).
messages: Interacts with ALB3.
messages: Membrane
messages: Pigment deficiency and seedling lethality.
messages: chloroplast thylakoid membrane

3702:AT1G61750
gene id: 3702:AT1G61750
uniprot id: Q9SYB1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT4G15670
gene id: 3702:AT4G15670
uniprot id: A0A178UXL8
uniprot id: Q6NLU2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.
messages: Nucleus

3702:AT1G49715
gene id: 3702:AT1G49715
uniprot id: Q2V4H7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G10440
gene id: 3702:AT2G10440
uniprot id: Q9SHV7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant Mediator complex subunit 15 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).
messages: Component of the Mediator complex.
messages: Nucleus

3702:AT3G15850
gene id: 3702:AT3G15850
uniprot id: A0A178VBZ6
uniprot id: Q949X0
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Fatty acid desaturase involved in the first desaturation step leading to the formation of hexadeca 7,10,13-trienoic acid (16:3(7Z,10Z,13Z)), the major functional components of thylakoid membranes (PubMed:15579662, PubMed:16666902, PubMed:15240892). Required for chloroplast biogenesis at low temperature (PubMed:16668849). Also indirectly involved in the production of the oxylipin dinor-oxo-phyto-dienoic acid implicated in wound signaling (PubMed:15579662).
messages: Highly expressed in young leaves. Low expression in roots.
messages: Membrane
messages: Substrate specificity shifts from delta-7 to delta-9 desaturation when the protein is retargeted to the cytoplasm.
messages: The histidine box domains are involved in binding the catalytic metal ions.
messages: chloroplast membrane

3702:AT3G07830
gene id: 3702:AT3G07830
uniprot id: A0A384KZ87
uniprot id: Q9SFD1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT1G20580
gene id: 3702:AT1G20580
uniprot id: A0A178WFE6
uniprot id: Q9LM92
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the snRNP core protein family.
messages: Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity). May play a major role in the splicing of cellular pre-mRNAs. Required for normal plant development (PubMed:21421416).
messages: Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
messages: Expressed in young seedlings, roots, leaves, flowers and immature siliques.
messages: Nucleus
messages: Pleiotropic phenotypes of delayed flowering time and seed production, reduced root growth, partially defective leaf venation, abnormal numbers of trichome branches and changed numbers of floral organs. The double mutants smd3-a and smd3-b display embryonic lethality.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT4G05140
gene id: 3702:AT4G05140
uniprot id: Q9M0Y1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.
messages: Cell membrane
messages: May be involved in nucleoside transport.

3702:AT3G53090
gene id: 3702:AT3G53090
uniprot id: Q9SCQ2
names: Function
names: Similarity
messages: Belongs to the UPL family.
messages: Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins.

3702:AT1G67070
gene id: 3702:AT1G67070
uniprot id: A0A1P8ARS3
uniprot id: A0A5S9WQH3
uniprot id: Q9FZH5
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the mannose-6-phosphate isomerase type 1 family.
messages: Binds 1 zinc ion per subunit.
messages: By sugar starvation, by dark and by 3-O-methyl-Glc (3-OMG). Down-regulated by sugars. Up-regulated by DCMU, an exogenous photosynthesis inhibitor.
messages: Expressed at the last stage of senescence in old leaves.
messages: Inhibited by EDTA, Zn(2+), Cd(2+), DTT, p-chloromercuribenzoate and L-ascorbic acid (AsA).
messages: Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.
messages: Not expressed in any organs under light (at protein level).

3702:AT3G27170
gene id: 3702:AT3G27170
uniprot id: A0A178VKG6
uniprot id: P92942
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the chloride channel (TC 2.A.49) family.
messages: Broadly expressed in the plant.
messages: Homodimer (By similarity). Interacts with PP2A5 (PubMed:27676158).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Voltage-gated chloride channel.

3702:AT1G69490
gene id: 3702:AT1G69490
uniprot id: O49255
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed at the base of the inflorescence meristem and at late stages of development in petals and stamens. Up-regulated during leaf senescence.
messages: Expressed in senescing leaves, petals and sepals.
messages: Induced by the heterodimer APETALA3 (AP3)/PISTILLATA (PI) (PubMed:9489703). Induced by senescence (PubMed:22184656, PubMed:24659488, PubMed:25516602). Induced by abscisic acid (ABA) (PubMed:22184656, PubMed:25516602). Induced by ethylene (PubMed:25516602).
messages: No visible phenotype, but delayed leaf senescence (PubMed:16640597, PubMed:22184656). No visible phenotype under normal growth conditions, but mutant leaves show a stay-green phenotype and deficiency in chlorophyll degradation during extended darkness.
messages: Nucleus
messages: Plants silencing NAC029 produce abnormally shaped seeds.
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.
messages: Transcription activator that binds to, and transactivates the promoter of the abscisic aldehyde oxidase AAO3. Promotes chlorophyll degradation in leaves by enhancing transcription of AAO3, which leads to increased levels of the senescence-inducing hormone abscisic acid (ABA) (PubMed:25516602). Involved in the control of dehydration in senescing leaves. Binds to the DNA sequence 5'-CACGTAAGT-3' of SAG113 promoter. SAG113 acts as negative regulator of ABA signaling for stomatal closure in leaves, and controls water loss during leaf senescence (PubMed:22184656). Transcription factor of the NAC family involved in senescence. May function in the transition between active cell division and cell expansion (PubMed:16640597). Required for normal seed development and morphology (PubMed:18849494).

3702:AT4G11180
gene id: 3702:AT4G11180
uniprot id: O82498
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism (By similarity). Required for seed accumulation of neolignans.
messages: Homodimer.
messages: Lacks seed-specific neolignans such as 3-{4-[2-hydroxy-2-(4-hexosyloxy- 3-methoxyphenyl)-1-hydroxymethylethoxy]-3,5-di-methoxyphenyl}acryloylcholine.
messages: Seed coat specific expression.
messages: apoplast

3702:AT4G34520
gene id: 3702:AT4G34520
uniprot id: A0A178UUK5
uniprot id: Q38860
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in upper part of roots, hypocotyls and cotyledons of developing embryo. Levels increase in early stages (torpedo, 4 days after flowering) and decrease during late stages of embryo development.
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: CLR.2, the major quantitative trait loci (QTL) involved in seed lipid metabolism is associated with the single point mutation L407V.
messages: Contributes to fatty acids elongation and stockage in developing seeds. Active on both saturated and mono-unsaturated acyl-CoAs of 16 and 18 carbons. Required for the elongation of C18 to C20 and of C20 to C22 fatty acids. Mediates also the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C22:1, C22, C24:1, C24, C26) (PubMed:15277688, PubMed:16765910, PubMed:7734965, PubMed:9263455, Ref.4, Ref.5, PubMed:12135493, PubMed:23145136). Has no activity with polyunsaturated C18:2 and C18:3 or with acyl-CoAs having 22 carbons or longer chain length (PubMed:12135493).
messages: Expressed specifically in seeds, especially in embryos (PubMed:11575726, PubMed:7734965). Expressed in siliques (PubMed:18465198).
messages: Inhibited by K3 herbicides such as allidochlor, cafenstrole and flufenacet (PubMed:15277688). Strongly inhibited by metazachlor and only slightly by mefluidide (PubMed:22284369).
messages: Microsome membrane
messages: Repressed by herbicides such as flufenacet and benfuresate.
messages: Strong fatty acid chain length ratio (CLR) reduction.

3702:AT4G12310
gene id: 3702:AT4G12310
uniprot id: A0A178UVW4
uniprot id: Q9STI0
names: Caution
names: Similarity
messages: Belongs to the cytochrome P450 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G09760
gene id: 3702:AT4G09760
uniprot id: Q9SZ92
names: Function
names: Induction
names: Similarity
messages: Belongs to the choline/ethanolamine kinase family.
messages: By wounding, and salt and osmotic stresses.
messages: Involved in phospholipid biosynthesis. Catalyzes the first step in phosphatidylcholine biosynthesis (By similarity).

3702:AT4G37370
gene id: 3702:AT4G37370
uniprot id: Q9SZT7
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G48610
gene id: 3702:AT3G48610
uniprot id: Q8H965
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the bacterial phospholipase C family.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Not induced by inorganic phosphate deprivation.
messages: Secreted

3702:AT1G25250
gene id: 3702:AT1G25250
uniprot id: A0A178WG74
uniprot id: A0A384L6U9
uniprot id: Q9FRH4
names: Caution
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Highly expressed in leaves, hypocotyls, roots, vasculature of cotyledons, floral organs and in the endodermis and vasculaturenof inflorescence stems.
messages: Not regulated by auxin.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor regulating lateral organ morphogenesis and gravitropic responses (PubMed:24039602). Has a redundant role with IDD14 in directing leaf and floral organ morphogenesis (PubMed:24039602). Acts cooperatively with IDD15 to control silique and branche orientation (PubMed:24039602). Involved in the establishment of auxin gradients through the regulation of auxin biosynthesis and transport (PubMed:24039602).

3702:AT5G65810
gene id: 3702:AT5G65810
uniprot id: Q0WPN7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Reduced homogalacturonan pectins (HG) methylesterification in cell walls (PubMed:21422118). Plants lacking both CGR2 and CGR3 (cgr2-1 cgr3-1) exihibit severe defects in plant growth and development (e.g. shorter hypocotyl and primary root length due to reduced cell elongation, and abnormal pollen tube elongation), as well as reduced levels of pectin methylesterification associated with decreased microsomal pectin methyltransferase activity. The double mutant cgr2-1 cgr3-1 also lacks uronic acids and methyl ester (PubMed:25704846). Reduced HG methylesterification in cgr2-1 cgr3-1 double mutant results in thin but dense leaf mesophyll that limits CO(2) diffusion to chloroplasts and reduces leaf area, thus impairing photosynthesis efficiency and carbon (C) partitioning (PubMed:27208234).
messages: Together with CGR2, required for homogalacturonan pectins (HG) methylesterification in the Golgi apparatus prior to integration into cell walls, essential for general growth and development (PubMed:21422118, PubMed:25704846, PubMed:27208234). Promotes petiole elongation (PubMed:21422118). Impacts photosynthesis and respiration efficiency by influencing leaf mesophyll morphology and physiology; pectin methylesterification modulates both expansion and positioning of cells in leaves, probably by changing cell walls plasticity (PubMed:27208234).

3702:AT5G58190
gene id: 3702:AT5G58190
uniprot id: A0A5S9YHG8
uniprot id: F4KDJ9
uniprot id: Q8VYH3
names: Function
names: Similarity
messages: Belongs to the YTHDF family.
messages: Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing.

3702:AT4G28815
gene id: 3702:AT4G28815
uniprot id: A0A1P8B4H3
uniprot id: Q7XHI7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bHLH protein family.
messages: Homodimer.
messages: Nucleus

3702:AT2G30220
gene id: 3702:AT2G30220
uniprot id: A0A654EXH1
uniprot id: O22918
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G18260
gene id: 3702:AT3G18260
uniprot id: Q9LJQ5
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3702:AT3G06550
gene id: 3702:AT3G06550
uniprot id: A0A178VHR8
uniprot id: A0A178VI55
uniprot id: Q0WW17
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PC-esterase family. CASD1 subfamily.
messages: Decreased levels of acetylated cell wall polymers and lower amounts of acetic acid in single mutant. Increased tolerance toward the necrotrophic fungal pathogen Botrytis cinerea (PubMed:21212300). Severe growth phenotypes (e.g. dwarf and abnormal flower organs) associated with reduction in the secondary wall thickening and the stem mechanical strength in the quadruple mutant rwa1 rwa2 rwa3 rwa4 and characterized by reduced xylan acetylation and altered ratio of non-methylated to methylated glucuronic acid side chains. Absence of interfascicular fibers and xylem cells differentiation (PubMed:21673009, PubMed:24019426). The double mutant rwa2 rwa4 and triple mutants rwa2 rwa3 rwa4, rwa1 rwa2 rwa3 and rwa1 rwa2 rwa4 are also dwarfs with abnormal morphology. Altered O-acetylated xyloglucans (XyG) oligosaccharides (XyGOs) composition (PubMed:24019426).
messages: Endoplasmic reticulum membrane
messages: Expressed in cells undergoing secondary wall thickeningin a SND1-dependent manner, such as xylem cells. Slightly elevated in the inflorescence stems (PubMed:21673009). Mainly observed in leaves and inflorescence stem tops, but present ubiquitously (PubMed:21212300).
messages: Golgi apparatus membrane
messages: Membrane
messages: Probable O-acetyltransferase involved in the acetylation of cell wall polymers (both pectic and nonpectic polysaccharides) and of xylan during secondary wall biosynthesis. Catalyzes the O-acetylation of xyloglucan.
messages: Seems required for infection by the necrotrophic fungal pathogen Botrytis cinerea.

3702:AT5G25540
gene id: 3702:AT5G25540
uniprot id: Q6NQH9
names: Domain
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.

3702:AT1G33360
gene id: 3702:AT1G33360
uniprot id: Q66GN9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent specificity component of the mitochondrial Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
messages: Belongs to the ClpX chaperone family.
messages: Mitochondrion

3702:AT2G39320
gene id: 3702:AT2G39320
uniprot id: O80949
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C85 family.
messages: Could be the product of a pseudogene.
messages: Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation.
messages: Nucleus

3702:AT1G13380
gene id: 3702:AT1G13380
uniprot id: A0A178WKX4
uniprot id: Q9FX59
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Membrane

3702:AT1G10095
gene id: 3702:AT1G10095
uniprot id: A0A1P8AUX8
uniprot id: A0A1P8AV10
uniprot id: A0A1P8AV19
uniprot id: O80601
names: Similarity
messages: Belongs to the protein prenyltransferase subunit alpha family.

3702:AT3G27010
gene id: 3702:AT3G27010
uniprot id: A0A178VAT1
uniprot id: Q9LSD5
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with PURA1 (PubMed:12631321). Interacts with SPL (PubMed:25527103).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor that binds to the site II motif (3'-TGGGCC/T-5') in the promoter of PCNA-2 and to 3'-GCCCG/A-5' elements in the promoters of cyclin CYCB1-1 and ribosomal protein genes.

3702:AT5G22380
gene id: 3702:AT5G22380
uniprot id: Q9FMR3
names: Domain
names: Subcellular Location Annotation
messages: Nucleus
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.

3702:AT3G05330
gene id: 3702:AT3G05330
uniprot id: Q84M91
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: In cv. Columbia, a naturally occurring frameshift at position 444 results in a shortened C-terminus. A complete sequence for TAN can be found in strain cv. Landsberg erecta (AC Q197W8).
messages: Interacts with POK1.
messages: Is required for spatial control cell division during plant development. Through an association with microtubules, acts both for the positioning of cytoskeletal arrays that establish planes of cell division during prophase and for spatial guidance of expanding phragmoplasts toward preestablished cortical division sites (CDS) during cytokinesis (By similarity).
messages: Nucleus
messages: nucleolus
messages: phragmoplast

3702:AT5G39740
gene id: 3702:AT5G39740
uniprot id: A0A178UJU5
uniprot id: P49227
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Component of the large ribosomal subunit (LSU).
messages: Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel. Seems involved in the regulation of cell proliferation (PubMed:19392710). Essential in leaf polarity establishment, probably having a role for translation in leaf dorsoventral patterning to specify leaf adaxial identity (PubMed:18305007).
messages: Cytoplasm
messages: Moderate reduction in cell number (PubMed:19392710). Abnormal leaf patterning, with the abaxial mesophyll features appearing in the adaxial mesophyll domain (PubMed:18305007). Double mutants oli2 oli7 have further reduced cell number but exhibit also excessive postmitotic cell enlargement in leaves (compensation phenotype) (PubMed:19392710). Plant missing both OLI7 and GIF1/AN3 have a strong compensation phenotype (PubMed:19392710).
messages: Nucleus
messages: nucleolus
messages: nucleoplasm

3702:AT3G60530
gene id: 3702:AT3G60530
uniprot id: A0A178VBD2
uniprot id: O49743
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Expressed in roots, flowers and leaves, and to a lower extent in stems.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

3702:AT1G08695
gene id: 3702:AT1G08695
uniprot id: A0A5S9TBG4
uniprot id: P82622
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G32550
gene id: 3702:AT1G32550
uniprot id: A0A178WJI4
uniprot id: Q9C7Y4
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (Probable). Mediates alternative electron partitioning in conditions of acceptor limitation at photosystem I (By similarity).
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: Slightly up-regulated in response to acceptor limitation at photosystem I (PSI) in plants lacking of photosynthetic [2Fe-2S] ferredoxin (Fd).
messages: chloroplast

3702:AT1G21880
gene id: 3702:AT1G21880
uniprot id: Q93ZH0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: GPI-anchored form.
messages: Impaired sensitivity to peptidoglycans (PGNs) leading to higher susceptibility to infection with virulent Pseudomonas syringae pv. tomato DC3000.
messages: Interacts with peptidoglycans.
messages: May be due to a competing donor splice site. Has no GPI-anchor.
messages: Required as a cell surface receptor for peptidoglycan (PGN) elicitor signaling leading to innate immunity. Plays an essential role in detecting PGNs and restricting bacterial growth (of Pseudomonas syringae pv. tomato DC3000 for example).
messages: Secreted

3702:AT5G07480
gene id: 3702:AT5G07480
uniprot id: A0A1R7T3F2
uniprot id: A0A654FZ95
uniprot id: F4K813
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT4G25550
gene id: 3702:AT4G25550
uniprot id: A0A178V0E0
uniprot id: Q8GXS3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Nudix hydrolase family. CPSF5 subfamily.
messages: Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.
messages: Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing. Involved in association with CPSF6 or CPSF7 in pre-MRNA 3'-end poly(A) site cleavage and poly(A) addition. NUDT21/CPSF5 binds to cleavage and polyadenylation RNA substrates. The homodimer mediates simultaneous sequence-specific recognition of two 5'-UGUA-3' elements within the pre-mRNA. Binds to, but does not hydrolyze mono- and di-adenosine nucleotides. May have a role in mRNA export.
messages: Homodimer. Component of the cleavage factor Im (CFIm) complex (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits FIPS5, PAPS4 and CPSF30 (PubMed:18479511).
messages: Homodimer. Component of the cleavage factor Im (CFIm) complex.
messages: Nucleus

3702:AT1G28335
gene id: 3702:AT1G28335
uniprot id: A7REE6
uniprot id: P82746
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G79360
gene id: 3702:AT1G79360
uniprot id: A0A5S9WVR0
uniprot id: O64515
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator (TC 2.A.1) superfamily. Organic cation transporter (TC 2.A.1.19) family.
messages: High affinity carnitine transporter involved in the active cellular uptake of carnitine. Also transports organic cations (By similarity).
messages: Membrane
messages: Vacuole membrane
messages: Weakly expressed in roots, including tips and initiation site of lateral roots, siliques and flowers, especially in pollen and stigma.

3702:AT1G11540
gene id: 3702:AT1G11540
uniprot id: A0A178WFG4
uniprot id: F4I8X6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Membrane

3702:AT1G79210
gene id: 3702:AT1G79210
uniprot id: A0A178W2F8
uniprot id: Q8L4A7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.

3702:AT5G27950
gene id: 3702:AT5G27950
uniprot id: A0A1P8BH75
uniprot id: Q8W0Y9
names: Caution
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT1G20810
gene id: 3702:AT1G20810
uniprot id: Q9LM71
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: chloroplast thylakoid lumen

3702:AT1G04280
gene id: 3702:AT1G04280
uniprot id: Q0WUY1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with calmodulin (CaM) in a calcium Ca(2+)-dependent manner in vitro.
messages: Mitochondrion outer membrane
messages: No visible phenotype under normal growth conditions.
messages: Phosphorylates NAD(+) to produces NADP(+) in a calmodulin calcium-dependent manner (PubMed:31554701). Does not possess activity toward NADH (PubMed:31554701). Has broad specificity for the phosphoryl donor, as ATP, CTP, GTP and UTP can be used interchangeably and produce similar efficiencies (PubMed:31554701). May play a role in producing NADP(H) needed to regulate the elicitor-induced reactive oxygen species (ROS) burst by sustaining the activity of NADPH oxidases (PubMed:31554701). Does not seem to play a role in photosynthesis-driven growth (PubMed:31554701).

3702:AT2G35910
gene id: 3702:AT2G35910
uniprot id: A0A178VUC2
uniprot id: Q8RX29
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10370
gene id: 3702:AT1G10370
uniprot id: A0A178WC98
uniprot id: Q9FUS8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: By dehydration stress, auxin, abscisic acid (ABA), jasmonate, ozone and transition from dark to far-red and red light.
messages: Delayed flowering, long-hypocotyl phenotype under low fluences of far-red light and insensitive to ABA-mediated inhibition of root elongation.
messages: Involved in light signaling, mainly phyA-mediated photomorphogenesis and in the integration of various phytohormone signals to modulate various aspects of plant development by affecting glutathione pools. In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB) and benzyl isothiocyanate (BITC).
messages: cytosol

3702:AT5G20190
gene id: 3702:AT5G20190
uniprot id: A0A178UT17
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G19080
gene id: 3702:AT5G19080
uniprot id: A0A5S9Y5G7
uniprot id: Q84ME1
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (in vitro).
messages: Belongs to the RING-type zinc finger family. LOG2 subfamily.
messages: Cytoplasm
messages: E3 ubiquitin ligase.
messages: Myristoylated (in vitro).
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G62080
gene id: 3702:AT1G62080
uniprot id: O04575
names: Similarity
messages: Belongs to the UPF0540 family.

3702:AT3G27140
gene id: 3702:AT3G27140
uniprot id: Q3EAZ3
names: Caution
names: Similarity
messages: Although related to the protein phosphatase 2C family, lacks some of the conserved residues that bind manganese, suggesting it has no phosphatase activity.
messages: Belongs to the PP2C family.
messages: Could be the product of a pseudogene.

3702:AT1G26798
gene id: 3702:AT1G26798
uniprot id: A0A5S9VZE4
uniprot id: Q6ID71
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G12020
gene id: 3702:AT5G12020
uniprot id: A0A178UMY5
uniprot id: P29830
names: Developmental Stage
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small heat shock protein (HSP20) family.
messages: By heat shock.
messages: Cytoplasm
messages: Expressed in seeds from 1 to 4 days after imbibition.
messages: May form oligomeric structures.

3702:AT1G60800
gene id: 3702:AT1G60800
uniprot id: A0A384LIN7
uniprot id: A0A654EJS3
uniprot id: Q93ZS4
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Enhanced susceptibility to geminivirus infection.
messages: Expressed in seedlings, leaves and flowers.
messages: Inhibited by the viral nuclear shuttle protein (NSP) that binds to the region required for oligomerization.
messages: Involved in defense response to geminivirus infection.
messages: Oligomer. Interacts with geminivirus nuclear shuttle protein (NSP).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G08100
gene id: 3702:AT5G08100
uniprot id: F4K9K7
uniprot id: P50287
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Acts in asparagine catabolism but also in the final steps of protein and degradation via hydrolysis of a range of isoaspartyl dipeptides. The affinity for Asn and at least 4 isoaspartyl dipeptides (L-beta-Asp-Ala, L-beta-Asp-Gly, L-beta-Asp-Leu, L-beta-Asp-Phe) is quite low, KM being greater than 4.0 mM. The enzyme is inactive on alpha-aspartyl dipeptides.
messages: Belongs to the Ntn-hydrolase family.
messages: Cleaved into an alpha and beta chain by autocatalysis; this activates the enzyme. The N-terminal residue of the beta subunit is responsible for the nucleophile hydrolase activity.
messages: Heterotetramer of two alpha and two beta chains arranged as a dimer of alpha/beta heterodimers.

3702:AT1G13900
gene id: 3702:AT1G13900
uniprot id: A0A178WAN1
uniprot id: Q9LMG7
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted

3702:AT1G72320
gene id: 3702:AT1G72320
uniprot id: Q9C552
names: Domain
names: Function
names: Miscellaneous
names: Sequence Caution
names: Subcellular Location Annotation
messages: May be due to a competing acceptor splice site.
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: Sequencing errors.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).
messages: nucleolus

3702:AT3G59140
gene id: 3702:AT3G59140
uniprot id: A0A5S9XMF1
uniprot id: Q9LYS2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: Membrane
messages: Pump for glutathione S-conjugates.
messages: Ubiquitous.

3702:AT2G01460
gene id: 3702:AT2G01460
uniprot id: A0A384LHU9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G24730
gene id: 3702:AT3G24730
uniprot id: Q6NMD4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DIM1 family.
messages: Nucleus

3702:AT1G68990
gene id: 3702:AT1G68990
uniprot id: A0A5S9WQX5
uniprot id: F4I0I3
uniprot id: P92969
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phage and mitochondrial RNA polymerase family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Mitochondrion

3702:AT5G41800
gene id: 3702:AT5G41800
uniprot id: Q8L4X4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane
messages: May be involved in the transport of GABA.

3702:AT5G15280
gene id: 3702:AT5G15280
uniprot id: Q9LXF4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G32500
gene id: 3702:AT1G32500
uniprot id: A0A384LFE4
uniprot id: Q9LQK7
names: Caution
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with NAP7.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Was originally (PubMed:11346655) thought to belong to the ABC transporter family. Lacks the conserved ABC domain, which is one of the features of the ABC transporter family.
messages: chloroplast

3702:AT2G35420
gene id: 3702:AT2G35420
uniprot id: Q6NKR1
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G67320
gene id: 3702:AT5G67320
uniprot id: Q9FN19
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Acts as repressor of cold stress-regulated gene expression. Interacts specifically with and promotes deacetylation of histone H4. Plays a role in gene regulation for plant acclimation and tolerance to cold stress.
messages: No visible phenotype under normal growth conditions, but mutant seedlings are hypersensitive to freezing.
messages: Nucleus

3702:AT1G72680
gene id: 3702:AT1G72680
uniprot id: A0A178WLT3
uniprot id: Q9CAI3
names: Cofactor
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed in the vasculature of the primary root and elongation regions. Expressed in the hypocotyl, cotyledon veins, vasculature of the first rosette leaves, hydathodes and at the base of the trichomes. In stems, expressed in the vascular cambium, interfascicular cambium developing xylem and cortex region. Expressed in the style, the vascular strands of the sepals pollen and anthers in flowers, in the abscission and stigmatic regions of siliques and seed funicule and testa.
messages: Homodimer.
messages: Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

3702:AT2G37925
gene id: 3702:AT2G37925
uniprot id: A0A5S9X520
uniprot id: Q8SAA5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.
messages: Down-regulated by treatment with high concentrations of copper.
messages: Highly expressed in roots and at lower levels in leaves, stems and flowers.
messages: Involved in the transport of copper.
messages: Membrane

3702:AT3G42550
gene id: 3702:AT3G42550
uniprot id: F4JF07
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT2G23550
gene id: 3702:AT2G23550
uniprot id: A0A1P8B065
uniprot id: A0A1P8B087
uniprot id: A0A5S9X0H7
uniprot id: F4IMK2
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Methylesterase.
messages: Putative methylesterase.

3702:AT5G61670
gene id: 3702:AT5G61670
uniprot id: Q9FKF4
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the orange-like family.
messages: Cytoplasm
messages: Decreased levels upon illumination, in both nucleus and plastids (PubMed:31604812). Induced by TCP14 (PubMed:31604812).
messages: Increased expression levels of ELIP1 and ELIP2, especially upon illumination (PubMed:31604812). Reduced cotyledons greening in deetiolated seedlings (PubMed:31604812).
messages: Interacts with the phytoene synthase PSY1 in chloroplast. Binds to the eukaryotic release factor eRF1-2 (PubMed:34405771). Interacts with the transcription factor TCP14 in the nucleus to repress chloroplast biogenesis in etiolated seedlings (PubMed:31604812). Associates to the E2 ubiquitin-conjugating enzyme UBC19 (PubMed:34405771).
messages: Involved in chromoplast differentiation. Associated with a cellular process that triggers the differentiation of pro-plastids or other non-colored plastids into chromoplasts for carotenoid accumulation (PubMed:24267591). Is associated with carotenoid accumulation in chromoplasts (PubMed:26224804). Functions as a major regulator of the phytoene synthase PSY1 protein level and activity. Modulates carotenoid biosynthesis by means of post-transcriptional regulation of PSY1 (PubMed:25675505). Modulates carotenoid biosynthesis in part by up-regulating a series of endogenous carotenogenic genes (PubMed:25857664). Regulates cell elongation in the petiole in an eRF1-2-dependent manner (PubMed:34405771). Binds to and represses TCP14 transactivation activity, thus preventing early light-induced proteins (ELIPs, e.g. ELIP1 and ELIP2) expression and delaying chloroplast biogenesis (e.g. lower chlorophyll biosynthesis and slower development of thylakoid membranes) in germinating cotyledons and etiolated seedlings; reduced levels upon illumination combined to TCP14 accumulation derepress chloroplast biogenesis during deetiolation (PubMed:31604812).
messages: Its sequence is related to the DnaJ family but lacks the J domain. The CR-type-like region is similar to CR-type zinc-fingers.
messages: Nucleus
messages: Ubiquitination at K-58 by UBC19 is essential for nuclear localization.
messages: chloroplast membrane

3702:AT3G49690
gene id: 3702:AT3G49690
uniprot id: Q9M2Y9
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in an adaxial ball-shaped set of cells in three to five cell layers around the L3 layer of the shoot apical meristem (SAM) in youg plantlets. In the inflorescence meristem, confined to the axils of flower primordia.
messages: Nucleus
messages: Transcription activator (By similarity). Positively regulates axillary meristems (AMs) formation and development, especially during inflorescence.
messages: Ubiquitous.

3702:AT5G56640
gene id: 3702:AT5G56640
uniprot id: A0A1P8BGX3
uniprot id: Q9FJU4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the myo-inositol oxygenase family.
messages: Binds 2 iron ions per subunit.
messages: Cytoplasm
messages: Expressed in flowers and siliques.
messages: Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.

3702:AT2G45330
gene id: 3702:AT2G45330
uniprot id: A0A178VNZ3
uniprot id: F4IW51
uniprot id: F4IW52
names: Function
names: Similarity
messages: Belongs to the KptA/TPT1 family.
messages: Catalyzes the last step of tRNA splicing, the transfer of the splice junction 2'-phosphate from ligated tRNA to NAD to produce ADP-ribose 1''-2'' cyclic phosphate.

3702:AT5G53170
gene id: 3702:AT5G53170
uniprot id: A0A178UR45
uniprot id: Q9FGM0
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Binds 1 zinc ion per subunit.
messages: By high light.
messages: Homooligomer.
messages: In contrast to fungi and metazoa, plant mitochondria have more than one i-AAA-like complexes.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the N-terminal section; belongs to the AAA ATPase family.
messages: Mitochondrion inner membrane
messages: Probable ATP-dependent zinc metallopeptidase. Involved in the assembly and/or stability of the complexes I and V. Involved in thermotolerance but not in high light stress resistance or in the assembly/stability of the complexes I and V of the mitochondrial oxidative phosphorylation system.
messages: chloroplast thylakoid membrane

3702:AT1G17500
gene id: 3702:AT1G17500
uniprot id: A0A178W5K3
uniprot id: Q9LNQ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
messages: Involved in transport of phospholipids.
messages: Membrane

3702:AT2G18245
gene id: 3702:AT2G18245
uniprot id: A0A178VZN4
uniprot id: Q8S8G6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM53 family.
messages: Membrane
messages: Nucleus outer membrane

3702:AT2G30160
gene id: 3702:AT2G30160
uniprot id: O64731
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT4G12970
gene id: 3702:AT4G12970
uniprot id: Q9SV72
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Expressed in immature organs, including leaves, stems and flower buds, but not in roots, shoot apical meristem and petals. Detected in the mesophyll tissues but not in the epidermal tissues where stomata develop.
messages: Interacts with ERECTA and TMM.
messages: Positively regulates stomatal density and patterning. Acts by competing with EPF2 (AC Q8LC53) for the same receptors, ERECTA (AC Q42371) and TMM (AC Q9SSD1). Not cleaved by the protease CRSP (AC Q9LNU1) (PubMed:25043023).
messages: Reduced stomatal densities in various organs.
messages: Secreted
messages: The loop (82-95) connecting the two anti-parallel beta-strands (76-81 and 96-101) confers the function to the peptide.
messages: apoplast

3702:AT1G69040
gene id: 3702:AT1G69040
uniprot id: A0A178WD79
uniprot id: A0A5S9WQR5
uniprot id: F4I0I7
uniprot id: Q8LJW3
names: Function
names: Induction
names: Tissue Specificity
messages: Binds amino acids.
messages: By the cytokinin benzyladenine (BA) and cold stress.
messages: Highly expressed in flowers and at lower levels in leaves and siliques.
messages: May bind amino acids.

3702:AT5G40880
gene id: 3702:AT5G40880
uniprot id: A0A384LLK6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G44160
gene id: 3702:AT5G44160
uniprot id: Q9FFH3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Delayed flowering (PubMed:21265895, PubMed:25929516). Roots of the triple mutant jkd mgp nuc contain patches of undivided ground tissue (GT), indicating that cortex and endodermis layers are not fully separated. The quadruple mutant line jkd mgp nuc scr has short root meristems, lacks endodermis and miss Casparian strip (PubMed:25829440).
messages: Expressed throughout development.
messages: Highly expressed in vegetative organs and at lower levels in flowers and siliques. Expressed predominantly in roots. In roots, present in cortex, endodermis, and pericycle layer (PubMed:25829440).
messages: Inhibition of transcription factor activity by KIN10-mediated phosphorylation at Thr-98, Ser-178 and Ser-182 under sugar deprivation conditions, thus delaying flowering.
messages: Interacts with AKIN10.
messages: Nucleus
messages: Transcription activator that binds to the DNA sequence 5'-CTTTTGTCC-3' (PubMed:21265895, PubMed:25929516). Regulates photoperiodic flowering by modulating sugar transport and metabolism (PubMed:21265895, PubMed:25929516). Regulates SUS1 and SUS4 (PubMed:21265895). Transcription factor that regulates tissue boundaries and asymmetric cell division (PubMed:25829440). Contributes to the sequestration of 'SHORT-ROOT' to the nucleus (PubMed:25829440).
messages: Up-regulated by 'SHORT-ROOT' (SHR)(PubMed:16640459). Strongly down-regulated by sugar deprivation, but not regulated by day-length.

3702:AT5G58820
gene id: 3702:AT5G58820
uniprot id: F4KGD4
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: The C-terminal propeptide is autocleaved.

3702:AT5G66960
gene id: 3702:AT5G66960
uniprot id: A0A5S9YI82
uniprot id: Q9FGD4
names: Similarity
messages: Belongs to the peptidase S9A family.

3702:AT4G04810
gene id: 3702:AT4G04810
uniprot id: A0A1P8B8L0
uniprot id: Q9M0Z5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer (By similarity).
messages: cytosol

3702:AT2G15042
gene id: 3702:AT2G15042
uniprot id: Q9ZUK7
names: Caution
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Enhanced susceptibility to pathogen Pseudomonas syringae pv. phaseolicola.
messages: Lacks the signal peptide, which is a conserved feature of the gene family.

3702:AT2G46910
gene id: 3702:AT2G46910
uniprot id: A0A178VMV4
uniprot id: Q8W4F1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAP/fibrillin family.
messages: plastoglobule

3702:AT4G30120
gene id: 3702:AT4G30120
uniprot id: A0A1P8B4Q4
uniprot id: P0CW77
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Could be the product of a pseudogene. In strain cv. Columbia, a naturally frameshift at position 543 results in a truncated HMA3 protein. Lacks the magnesium binding sites, suggesting that it has no cadmium/zinc-transporting ATPase activity. A complete sequence for HMA3 can be found in strain cv. Wassilewskija (AC P0CW78).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT3G49170
gene id: 3702:AT3G49170
uniprot id: Q5G1T1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: May play a role in embryogenesis.
messages: chloroplast

3702:AT4G23470
gene id: 3702:AT4G23470
uniprot id: A0A178UWB6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G66690
gene id: 3702:AT5G66690
uniprot id: A0A5S9YHL2
uniprot id: Q9LVR1
uniprot id: W8PUV8
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Expressed in seedlings and roots.
messages: Involved in the O-glucosylation of monolignols (alcohol monomers of lignin) (PubMed:11042211, PubMed:15907484, PubMed:16995900, PubMed:21149736, PubMed:24667164). Glucosylates coniferyl alcohol to form coniferyl alcohol 4-O-glucoside (PubMed:11042211, PubMed:15907484, PubMed:16995900, PubMed:21149736, PubMed:24667164). Glucosylates sinapyl alcohol to form sinapyl alcohol 4-O-glucoside (PubMed:11042211, PubMed:12721858, PubMed:15907484, PubMed:21149736, PubMed:24667164). Glucosylates coniferyl aldehyde to form coniferyl aldehyde 4-O-glucoside (PubMed:15907484). Glucosylates sinapyl aldehyde to form sinapyl aldehyde 4-O-glucoside (PubMed:15907484). Possesses low activity with sinapate and ferulate as substrates (PubMed:11042211, PubMed:15907484).
messages: Plants overexpressing UGT72E2 show increased accumulation of monolignol glucosides in roots and appearance of these glucosides in leaves.

3702:AT1G63580
gene id: 3702:AT1G63580
uniprot id: Q9SH42
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT5G44630
gene id: 3702:AT5G44630
uniprot id: Q4KSH9
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: Does not emit any sesquiterpene volatiles except (E)-beta-caryophyllene, alpha-copaene and alpha-humulene.
messages: Expressed exclusively in flowers. Expressed in intrafloral nectaries and in the funiculus within the ovules.
messages: Involved in the biosynthesis of over 15 sesquiterpenes (C15). The major products are (+)-alpha-barbatene (27.3%), (+)-thujopsene (17.8%) and (+)-beta-chamigrene (9.9%). Can use farnesyl diphosphate or geranyl diphosphate as substrates, but not geranylgeranyl diphosphate.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT1G06080
gene id: 3702:AT1G06080
uniprot id: A0A1P8AU64
uniprot id: O65797
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Down-regulated by cold.
messages: Endoplasmic reticulum membrane
messages: Involved in delta-9 desaturation of fatty acids (Probable) (PubMed:17156034, PubMed:15240892). Involved in the production of very-long-chain fatty acids (VLCFAs) (PubMed:23175755). May desaturate chloroplastic monogalactosyl diacylglycerol (MGDG) and alter chloroplast membrane fluidity, which is required to prime a cold acclimation response (PubMed:27062193).
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants display enhanced freezing tolerance upon cold acclimation.
messages: Strongly expressed in inflorescence meristems, leaves, and flowers, and weakly in roots and seedpods.
messages: Substrate specificity shifts from delta-9 to delta-7 desaturation when the protein is retargeted to the chloroplast.
messages: The histidine box domains are involved in binding the catalytic metal ions.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.
messages: chloroplast membrane

3702:AT5G20300
gene id: 3702:AT5G20300
uniprot id: F4K480
uniprot id: Q6S5G3
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. TOC159 subfamily.
messages: Binds 1 Mg(2+) ion by subunit.
messages: By light conditions.
messages: Cytoplasm
messages: Expressed in seedlings, leaves, flowers, and roots.
messages: GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis. Probably specialized in the import of nuclear encoded photosynthetic preproteins from the cytoplasm to the chloroplast.
messages: Homodimer (By similarity). Part of the TOC core complex that includes 1 protein for the specific recognition of transit peptides surrounded by a ring composed of four proteins forming translocation channels, and four to five GTP-binding proteins providing energy. This core complex can interact with components of the TIC complex to form a larger import complex. Chloroplastic protein precursor such as prSS (precursor of the RuBisCO small subunit) interacts with these complexes. The TOC complex contains a specific subset of polar lipids such as digalactosyldiacylglyceride (DGDG), phosphatidylcholine (PC) and phosphatidylglycerol (PG). Interacts with TOC33 and TOC75.
messages: Membrane
messages: chloroplast outer membrane

3702:AT5G44575
gene id: 3702:AT5G44575
uniprot id: Q8GWN6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates upon infection by generalist herbivores such as Spodoptera littoralis (PubMed:35401621). Induced by wounding (PubMed:35401621).
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:34535661). Inhibits root growth (PubMed:34535661).
messages: Cell membrane
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mostly expressed in roots, and, barely, in seedlings shoots.
messages: apoplast

3702:AT4G15780
gene id: 3702:AT4G15780
uniprot id: A0A2H1ZEN2
names: Similarity
messages: Belongs to the synaptobrevin family.

3702:AT5G27660
gene id: 3702:AT5G27660
uniprot id: A0A178UPC0
uniprot id: A0A384KP42
names: Similarity
messages: Belongs to the peptidase S1C family.

3702:AT4G34750
gene id: 3702:AT4G34750
uniprot id: A0A178UZ62
uniprot id: O65694
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G38420
gene id: 3702:AT5G38420
uniprot id: P10797
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: There are four genes coding for RBS in Arabidopsis thaliana.
messages: chloroplast

3702:AT3G05690
gene id: 3702:AT3G05690
uniprot id: A0A1I9LSX7
uniprot id: A0A654F9Q6
uniprot id: Q147N1
uniprot id: Q9M9X4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYA/HAP2 subunit family.
messages: Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.
messages: Heterotrimer.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC (By similarity). NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity). Component of a heat stress-inducible transcriptional complex with NF-YA and NF-YB subunits made, at least, of NFYA2, NFYB3 and DPB3-1 in cooperation with DREB2A (PubMed:25490919).
messages: In seedlings, first expressed in petioles and leaf blades of the cotyledons as well as tops and bottoms of the hypocotyls.
messages: Nucleus
messages: Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Promotes the expression of heat stress-inducible genes by contributing to the formation of a heat stress-specific transcriptional complex with NF-Y subunits (e.g. DPB3-1, NF-YA2 and NF-YB3) and DREB2A at the promoter of target genes, thus promoting heat tolerance (PubMed:25490919).
messages: Ubiquitous (PubMed:11250072, PubMed:9662544). Expressed in seedlings, roots, petioles, hypocotyls, reproductive organ tissues and leaves (PubMed:25490919).

3702:AT4G30110
gene id: 3702:AT4G30110
uniprot id: Q9SZW4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane
messages: Plays an important role in zinc transport and homeostasis. Could also be involved in cadmium detoxification.
messages: Predominantly expressed in the vascular tissues of roots, stems, and leaves. Also detected in developing anthers.

3702:AT1G74890
gene id: 3702:AT1G74890
uniprot id: Q7G8V2
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARR family. Type-A subfamily.
messages: By cytokinin (BA) in roots.
messages: Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.
messages: Nucleus
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT1G71370
gene id: 3702:AT1G71370
uniprot id: Q8GXD6
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX55/SPB4 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G32100
gene id: 3702:AT1G32100
uniprot id: Q9FVQ6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the NmrA-type oxidoreductase family. Isoflavone reductase subfamily.
messages: Expressed in roots and stems.
messages: Forms homodimers.
messages: No significant difference in lariciresinol content (PubMed:18347017). Prr1 and prr2 double mutants show a complete inhibition of lariciresinol biosynthesis (PubMed:18347017). Elevated levels of pinoresinol, reduced lignin content in the fiber cells, and a slightly altered lignin structure with low abundance of cinnamyl alcohol end groups (PubMed:25107662).
messages: Reductase involved in lignan biosynthesis (PubMed:18347017, PubMed:25107662). Involved in secondary cell wall biosynthesis in fiber cells (PubMed:25107662). Unlike conventional pinoresinol reductases that can reduce both pinoresinol and lariciresinol, PRR1 shows a strict substrate preference toward pinoresinol (PubMed:18347017). Active on both (+) and (-)-pinoresinol (PubMed:18347017). Abstracts the 4R-hydride from the NADPH cofactor during catalysis (PubMed:18347017).

3702:AT1G77740
gene id: 3702:AT1G77740
uniprot id: Q8L796
names: Activity Regulation
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Activated by binding to RABE1D.
messages: Cell membrane
messages: Interacts with RABE1A, TUFA, RABE1C, RABE1D and RABE1E.
messages: May be due to intron retention.
messages: Plants overexpressing PI5K2 exhibit severe dwarfism and are enriched in the plasma membrane of the root meristem.
messages: Possesses phosphatidylinositol (PtdIns) phosphate kinase activity (Probable). Phosphorylates PtdIns(4)P and PtdIns(3)P in vitro (PubMed:19903693). Doesn't phosphorylate PtdIns(5)P nor PtdIns(3,4)P2 in vitro (PubMed:19903693). Does not exhibit phosphatidylinositol kinase activity in vitro (PubMed:19903693).

3702:AT3G55650
gene id: 3702:AT3G55650
uniprot id: Q9M057
names: Similarity
messages: Belongs to the pyruvate kinase family.

3702:AT1G12610
gene id: 3702:AT1G12610
uniprot id: A0A178WLZ7
uniprot id: Q9LN86
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By high-salt stress.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold or dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation.

3702:AT5G56750
gene id: 3702:AT5G56750
uniprot id: A0A178UI60
uniprot id: A0A1P8BB26
uniprot id: Q9FJT7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NDRG family.
messages: Cytoplasm
messages: Expressed in root vasculature, cotyledons, leaves, petals, mature stamens and pollen grains.
messages: Induced by sucrose and glucose. Down-regulated by auxin.
messages: Interacts with GB1. Interacts with the heterodimers formed by GB1 and GG1, or GB1 and GG2. Interacts with RGS1.
messages: Interacts with the heterotrimeric G protein beta subunit GB1 and plays an significant role in GB1-dependent regulation of lateral root formation. Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1 (PubMed:19948787). Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL1 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment and maintenance of auxin gradients (PubMed:24223735).
messages: Slight reduction in length of primary root.

3702:AT1G61270
gene id: 3702:AT1G61270
uniprot id: O22719
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Amino acid transporter.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane

3702:AT1G27630
gene id: 3702:AT1G27630
uniprot id: A0A1P8AQH3
uniprot id: A0A384LFV3
uniprot id: A0A654ED97
uniprot id: Q8LBC0
names: Caution
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Abundantly expressed in flowers. Expressed in roots, seedlings, rosettes and stems.
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin T subfamily.
messages: Interacts with CDKC-1 and CDKC-2.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G24340
gene id: 3702:AT3G24340
uniprot id: Q9LK10
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF2/RAD54 helicase family.
messages: Interacts with NRPD1.
messages: Nucleus
messages: Probable chromatin remodeling factor.

3702:AT4G22130
gene id: 3702:AT4G22130
uniprot id: Q6R2J8
names: Disruption Phenotype
names: Domain
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cannot functionally replace STRUBBELIG.
messages: Expressed in seedlings, roots, stems, leaves, flowers and siliques.
messages: Membrane
messages: No visible phenotype.
messages: Over-expression of SRF8 may lead to seedling lethality in both cv. Landsberg and cv. Columbia.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT2G26820
gene id: 3702:AT2G26820
uniprot id: O81025
names: Developmental Stage
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. IAN subfamily.
messages: Expressed during the young seedling stage.
messages: Expressed in radicles of the germinating seeds.
messages: Up-regulated by brassinolides. Down-regulated by 2-aminoethoxyvinylglycine (AVG), high CO(2), isoxaben, and propiconazole treatments.

3702:AT1G73140
gene id: 3702:AT1G73140
uniprot id: A0A178WIY7
uniprot id: Q1PFD9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT5G11010
gene id: 3702:AT5G11010
uniprot id: Q8VYP6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Clp1 family. NOL9/GRC3 subfamily.
messages: Polynucleotide 5'-kinase involved in rRNA processing.
messages: nucleolus

3702:AT3G23810
gene id: 3702:AT3G23810
uniprot id: A0A178VEP9
uniprot id: Q9LK36
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
messages: Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine.
messages: Belongs to the adenosylhomocysteinase family.
messages: Binds 1 NAD(+) per subunit.
messages: In contrast to SAHH1, a mutation in the C-terminus of this protein is not sufficient to abolish transcriptional gene silencing.

3702:AT4G29033
gene id: 3702:AT4G29033
uniprot id: Q2V3D7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT2G07773
gene id: 3702:AT2G07773
uniprot id: P92528
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of the duplicated genes (At2g07773) is not demonstrated.
messages: Mitochondrion membrane

3702:AT3G22950
gene id: 3702:AT3G22950
uniprot id: A0A384KMJ2
uniprot id: Q9LIK1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Arf family.
messages: Golgi apparatus

3702:AT5G07630
gene id: 3702:AT5G07630
uniprot id: A0A1P8BG39
uniprot id: F4K836
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RFT1 family.
messages: May be involved in N-linked oligosaccharide assembly.
messages: Membrane

3702:AT3G42050
gene id: 3702:AT3G42050
uniprot id: Q9LX65
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase H subunit family.
messages: Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates the ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (By similarity).
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: Vacuole membrane

3702:AT1G20925
gene id: 3702:AT1G20925
uniprot id: F4HWB6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the auxin efflux carrier (TC 2.A.69.2) family.
messages: Endoplasmic reticulum membrane
messages: Expressed in flowers.
messages: Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.

3702:AT5G63540
gene id: 3702:AT5G63540
uniprot id: A0A654GDN1
uniprot id: B3H7H7
uniprot id: Q5XUX6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RMI1 family.
messages: Component of the RMI complex, containing at least TOP3A and RMI1. The RMI complex interacts with RECQL4A (By similarity).
messages: Essential component of the RMI complex, a complex that plays an important role in the resolution step of homologous recombination, in a process called Holliday Junction dissolution, to limit DNA crossover formation in cells. Together with TOP3A, is essential for the resolution of meiotic recombination intermediates, a step that prevents entanglement of the parental chromosomes.
messages: sterile due to extensive chromosome breakage in meiosis I.

3702:AT1G12240
gene id: 3702:AT1G12240
uniprot id: Q39041
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 32 family.
messages: Endoplasmic reticulum membrane
messages: Expressed during germination et seedling growth.
messages: Golgi apparatus membrane
messages: Induced by gibberellin (e.g. gibberellic acid GA) that accumulates in seeds after red light treatment (PubMed:15056893). Accumulates upon infection with virulent but not with avirulent P.syringae (PubMed:16807755). Degraded in a VPEgamma-dependent manner during senescence (PubMed:12773619).
messages: Inhibited by C/VIF1 and C/VIF2.
messages: May be present in two forms, a 70 kDa monomer and a heterodimer of the 30 kDa and 38 kDa subunits. The ratio of the levels of the two forms within cells appears to be regulated developmentally (By similarity).
messages: Mostly expressed in stems, roots and flowers, and, to a lower extent, in mature leaves.
messages: Possible role in the continued mobilization of sucrose to sink organs (PubMed:20207708). Regulates root elongation (PubMed:16481625).
messages: Prevacuolar compartment membrane
messages: Reduced carbon fixation rates during the day, but increased respiration during the night (PubMed:20207708). Shorter roots (PubMed:16481625).
messages: The LCPYTRL domain (18-24) is critical for trafficking from the trans-Golgi network to the prevacuolar compartment and from the prevacuolar compartment to the central vacuole (PubMed:21899678). The PRRRRP domain (36-41) is involved in sorting to the vacuole (PubMed:23737500). At least two Arg are needed for correct delivery and the presence of two neighboring Pro seems to contribute to the sorting efficiency (PubMed:23737500).
messages: Vacuole
messages: Vacuole lumen
messages: Vacuole membrane
messages: trans-Golgi network membrane

3702:AT3G14190
gene id: 3702:AT3G14190
uniprot id: Q9LJG6
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell cycle regulated with a peak at late M/early G1 phase mitosis (PubMed:24206843). Peak of expression during metaphase (PubMed:26261921). Strongly expressed up to mid-prophase I and decreases during late prophase (PubMed:26272661). Not induced by stress (PubMed:26261921).
messages: Cytoplasm
messages: Expressed in somatic and reproductive tissues (PubMed:24206843). Expressed in inflorescence, young buds, roots and basal portion of young leaves (PubMed:26272661). Expressed in proliferating cells such as apical meristems of roots and shoots, expanding cotyledons and leaves, root vascular tissues, and in stomatal precursor cells (PubMed:26261921).
messages: Interacts directly with the anaphase promoting complex/cyclosome (APC/C) through the CDC27B and CDC20-1 subunits.
messages: Nucleus
messages: Patronus is Latin for protector.
messages: Reduced fertility when homozygous (PubMed:24206843, PubMed:24506176). High level of gametophytic aneuploidy (PubMed:24506176, PubMed:26272661). Occurrence of split sister centromeres at metaphase I (PubMed:26272661). Pans1 and pans2 double mutants are lethal when homozygous (PubMed:24206843). Increased mono- or divalent ions sensitivity resulting in primary root growth inhibition and increased lateral root density (PubMed:24134393). Hypersensitivity to microtubule-depolymerizing drugs and higher frequency of anaphase bridges under stress conditions (PubMed:26261921).
messages: Required for the maintenance of centromeric cohesion during interkinesis, until meiosis II (PubMed:24206843, PubMed:26272661). Required for regular configuration and segregation of sister chromatids in meiosis II (PubMed:24506176). Also required for centromere cohesion during meiosis I (PubMed:26272661). Involved in spindle organization at the end of telophase I and in meiosis II (PubMed:24506176). Required to prevent precocious release of pericentromeric cohesins during meiosis, but not for cohesion establishment and monopolar orientation of kinetochores at meiosis I (PubMed:24206843). Involved also in somatic development (PubMed:24206843). Regulates mitotic cell division and ploidy stability in somatic cell types (PubMed:24506176). May be involved in the organization of microtubules dynamics (PubMed:24506176). Involved in abiotic stresses and mono- or divalent ions tolerance and may play a role in maintaining meristematic activity under saline conditions (PubMed:24134393). PANS1 and GIG1 are part of a network linking centromere cohesion and cell cycle progression through control of APC/C activity (PubMed:26272661). Regulates the number of dividing cells in root meristem and is necessary for the anaphase onset control through an APC/C-mediated pathway (PubMed:26261921). Involved in maintaining correct chromosome arm cohesion under stress conditions (PubMed:26261921).
messages: The DEN-box is not essential for the meiotic function.

3702:AT2G38490
gene id: 3702:AT2G38490
uniprot id: A0A178VWQ4
uniprot id: O80902
names: Domain
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT4G36290
gene id: 3702:AT4G36290
uniprot id: Q84WV6
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MORC ATPase protein family.
messages: Endosome
messages: Expressed constitutively.
messages: Homodimer and heterodimer with MORC6. Component of an RNA-directed DNA methylation (RdDM) complex that contains at least MORC6, MORC1/CRT1, MORC2, SWI3D and SUVH9. Binds directly to SUVH2 and SUVH9 (PubMed:24465213, PubMed:24799676). Interacts with the resistance proteins RCY1, RPM1, SNC1, RPP8, SSI4 and RPS2 (PubMed:18191794, PubMed:20332379). The interactions with various resistance proteins are disrupted when these resistance proteins are activated (PubMed:20332379). Interacts with the PAMP recognition receptor FLS2 (PubMed:23250427).
messages: Loss of ATPase activity. Increased sensitivity to turnip crinkle virus (TCV) leading to spreading hypersensitive response (HR) and impaired control of viral replication and spread. Suppression of HR-like cell death induced by Pseudomonas syringae avrRpt2. Suppression of lesion formation and partial suppression of stunted growth of ssi4 mutant (PubMed:18191794). In the double mutant crt1-2 crh1-1, compromised resistance to avirulent Pseudomonas syringae and Hyaloperonospora arabidopsidis associated with compromised cytosolic calcium accumulation upon infection (PubMed:20332379). Impaired gene silencing due to decondensation of chromocenters leading to the derepression of DNA-methylated genes and transposable elements (TEs); DNA and histone methylation seems normal (PubMed:22555433, PubMed:24799676). The double mutant crt1-2 crh1-1 exhibits also an increased sensitivity to turnip crinkle virus (TCV), and reduced defense mediated by flg22 against Pseudomonas syringae (Pst). Impaired non-host resistance toward P. infestans and altered systemic acquired resistance (SAR) triggered by P. syringae pv. maculicola (Psm) AvrRpt2 cor(-). Reduced sensitivity to the DNA-damaging agent mitomycin C (PubMed:23250427).
messages: Mediator of defense signaling triggered by distinct classes of R proteins. Required during hypersensitive response (HR) that confers disease resistance to turnip crinkle virus (TCV). Exhibits ATPase activity (PubMed:18191794, PubMed:19704828). Contributes to resistance against Pseudomonas syringae and Hyaloperonospora arabidopsidis, at early stages prior to cytosolic calcium ions Ca(2+) accumulation (PubMed:20332379). Required for pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI), basal resistance, non-host resistance and systemic acquired resistance (SAR). Binds DNA/RNA in a non-specific manner and exhibits endonuclease activity. Probably involved in DNA repair (PubMed:23250427). Required for both RPP8- and SSI4-mediated resistance responses, thus being involved in both TIR- and CC-NB-LRR pathways (PubMed:18191794). Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing (PubMed:24799676). May also be involved in the regulation of chromatin architecture to maintain gene silencing (PubMed:22555433, PubMed:24799676).
messages: Nucleus
messages: Uses preferentially Mn(2+) and, to a lesser extent, Mg(2+) as cofactors.

3702:AT1G79620
gene id: 3702:AT1G79620
uniprot id: A0A1P8ASB9
uniprot id: A0A1P8ASH0
uniprot id: A0A654F1C0
uniprot id: Q8GY50
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT1G76720
gene id: 3702:AT1G76720
uniprot id: F4I410
uniprot id: Q9SRE1
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.

3702:AT1G22885
gene id: 3702:AT1G22885
uniprot id: A0A178WEI5
uniprot id: Q8LE06
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:33514716, PubMed:34535661, PubMed:31001913). Promotes the expression of immune-related marker genes (e.g. WRKY30, WRKY33 and CYP81F2) in a MIK2-dependent manner (PubMed:34535661). Inhibits root growth and regulates root meristems (PubMed:34535661, PubMed:31001913). Prevents general growth and development (PubMed:31001913). Exhibits antibacterial effects against Pseudomonas syringae pv. tomato DC3000, Ralstonia solanacearum, Bacillus subtilis and Agrobacterium tumefaciens, thus being an antimicrobial peptide (AMP) (PubMed:31001913).
messages: Cell membrane
messages: Induced by cold, drought and salt stress, but repressed by pathogenic bacteria Pseudomonas syringae pv. tomato (Pst) DC3000, jasmonate (MeJA), ethylene (ET) and salicylic acid (SA), mainly in shoots.
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mostly expressed in stems and flowers and, to a lower extent, in seedlings shoots, roots, siliques, seeds and leaves.
messages: Slightly increased growth and fresh weight.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast

3702:AT3G52290
gene id: 3702:AT3G52290
uniprot id: Q9FT53
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus
messages: cytoskeleton
messages: nucleolus

3702:AT4G38540
gene id: 3702:AT4G38540
uniprot id: A0A654FWZ6
uniprot id: O81816
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the 3-hydroxybenzoate 6-hydroxylase family.
messages: Expressed in seeds, seedlings, roots, leaves, flowers, pollen and siliques.
messages: Monomer.

3702:AT1G74990
gene id: 3702:AT1G74990
uniprot id: A0A178WMB2
uniprot id: Q9S7D6
names: Domain
names: Function
names: Subcellular Location Annotation
messages: E3 ubiquitin-protein ligase.
messages: Endoplasmic reticulum membrane
messages: The RING-type zinc finger domain is responsible for E3 ligase activity.

3702:AT1G02140
gene id: 3702:AT1G02140
uniprot id: A0A178WA48
uniprot id: O23676
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the mago nashi family.
messages: Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). The MAGO-Y14 heterodimer inhibits the ATPase activity of EIF4A3, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The MAGO-Y14 heterodimer interacts with the EJC key regulator PYM leading to EJC disassembly in the cytoplasm (By similarity). Can increase in vitro the expression from reporter constructs that contain leader introns required for the expression of different genes. In association with MAGO and PYM, participates in intron-mediated enhancement of gene expression (PubMed:21676911). The MAGO-Y14 heterodimer works synergistically with the NMD pathway to regulate male gametophyte development (PubMed:26867216).
messages: Cytoplasm
messages: Expressed in root and shoot meristems, cotyledons, vascular tissues of leaves, receptacle of flowers and siliques, and pollen grains.
messages: Heterodimer with Y14 (PubMed:19435936, PubMed:26867216). Part of the mRNA splicing-dependent exon junction complex (EJC); the core complex contains MLN51/CASC3, EIF4A3, MAGO and Y14 (Probable). Interacts with PYM (PubMed:16953428, PubMed:21676911). The interaction with PYM is direct and dissociates the EJC from spliced mRNAs (Probable). Interacts with EIF4A3 (PubMed:26867216).
messages: Male sterility due to pollen abortion after meiosis.
messages: Nucleus
messages: Nucleus speckle
messages: P-body
messages: nucleolus

3702:AT1G53300
gene id: 3702:AT1G53300
uniprot id: Q9MAH1
names: Disruption Phenotype
names: Function
names: Induction
names: Tissue Specificity
messages: By salt and ABA treatments.
messages: Expressed in the root elongation zone, stele, root cap, embryo vascular system, leaf axilar buds, silique abscission zone and guard cells.
messages: Involved in responses to osmotic stress and abscisic acid (ABA). May act as a positive regulator of ABA signaling during germination and seedling development under stress.
messages: No visible phenotype under normal growth conditions, but mutant seedlings show reduced root elongation under salt stress and increased germination rates under osmotic stress and exogenous ABA treatments.

3702:AT5G59430
gene id: 3702:AT5G59430
uniprot id: Q8L7L8
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A N-terminal domain (80-269) is responsible for the interaction with KU70.
messages: Binds specifically to the plant telomeric double-stranded DNA sequences 5'-GGTTTAG-3'. At least 4 repeats of telomeric sequences are required for binding. Induces DNA bending.
messages: Expressed ubiquitously. Highest expression in flowers and leaves.
messages: Homodimer and heterodimer with TRP2 and TRP3. Interacts with KU70.
messages: No visible phenotype, probably due to redundancy.
messages: Nucleus
messages: The C-terminal domain (464-578) is sufficient for telomere binding.

3702:AT3G55950
gene id: 3702:AT3G55950
uniprot id: Q9LY50
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed in roots, leaves, shoot apical meristems (SAM), and floral buds.
messages: Homodimer.
messages: Membrane
messages: Serine/threonine-protein kinase.

3702:AT2G27370
gene id: 3702:AT2G27370
uniprot id: A0A178VTI8
uniprot id: Q9ZQI2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Disorganised deposition of Casparian strips.
messages: Homodimer and heterodimers with other CASP proteins. Interacts with CASP1, CASP2, CASP4 and CASP5.
messages: Homodimer and heterodimers.
messages: Membrane
messages: Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

3702:AT4G12750
gene id: 3702:AT4G12750
uniprot id: A0A2H1ZEL5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G21100
gene id: 3702:AT2G21100
uniprot id: A0A7G2E7X1
uniprot id: Q84TH6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT2G32600
gene id: 3702:AT2G32600
uniprot id: A0A178VXZ1
uniprot id: O80897
names: Similarity
messages: Belongs to the SF3A2 family.

3702:AT1G55775
gene id: 3702:AT1G55775
uniprot id: A0A384L4K4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G01140
gene id: 3702:AT2G01140
uniprot id: A0A178VVW3
uniprot id: Q9ZU52
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: Can be trimethylated at Lys-387 by LSMT-L, but the trimethylation has no effect in vitro.
messages: Down-regulated by oxidative stress (PubMed:12492832). Induced by fructose and sucrose (PubMed:22561114). Down-regulated by abiotic stresses (PubMed:22561114).
messages: Expressed in roots, and at low levels in rosettes leaves, cauline leaves, stems and flowers.
messages: Homotetramer.
messages: Plays a key role in glycolysis and gluconeogenesis.
messages: S-glutathionylated.
messages: plastoglobule

3702:AT5G25110
gene id: 3702:AT5G25110
uniprot id: Q8W1D5
names: Domain
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT4G30370
gene id: 3702:AT4G30370
uniprot id: Q9M0C3
names: Domain
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: Up-regulated by chitin.

3702:AT2G03760
gene id: 3702:AT2G03760
uniprot id: A0A654ERP0
uniprot id: P52839
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Dimer.
messages: Expressed in the aerial parts of seedlings, in roots, leaves and flowers. Not detected in stems and siliques.
messages: Hypersensitivity to NaCl and ABA in seed germination, and to salicylic acid (SA) in seedling growth.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the stereospecific sulfate conjugation of 24-epibrassinosteroids. Preferred substrates are 24-epicathasterone and 6-deoxo-24-epicathasterone. Low activity with 22-deoxy-24-epiteasterone. No activity with 24-epimers catasterone and brassinolide. Sulfonates salicylic acid. May be involved in detoxification. Enhances plant response to pathogen infection and contributes to long distance signaling in systemic acquired resistance (SAR).
messages: Up-regulated by pathogens, methyljasmonate, salicylic acid, salt, osmotic stress, cold, auxin, cytokinin and abscisic acid treatments. Not induced by desiccation and ethylene treatment.

3702:AT5G12190
gene id: 3702:AT5G12190
uniprot id: A0A178UGK3
uniprot id: Q9FMP4
names: Function
names: Subcellular Location Annotation
messages: May be necessary for the splicing of pre-mRNA.
messages: Nucleus

3702:AT4G10670
gene id: 3702:AT4G10670
uniprot id: F4JME7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M24 family. SPT16 subfamily.
messages: Chromosome
messages: Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.
messages: Component of the FACT complex.
messages: Nucleus

3702:AT1G17130
gene id: 3702:AT1G17130
uniprot id: A0A654EBL4
uniprot id: A8MR03
uniprot id: Q9SHH1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CWC16 family. YJU2 subfamily.
messages: Component of the spliceosome. Present in the activated B complex, the catalytically activated B* complex which catalyzes the branching, the catalytic step 1 C complex catalyzing the exon ligation, and the postcatalytic P complex containing the ligated exons (mRNA) and the excised lariat intron.
messages: Nucleus
messages: Part of the spliceosome which catalyzes two sequential transesterification reactions, first the excision of the non-coding intron from pre-mRNA and then the ligation of the coding exons to form the mature mRNA. Plays a role in stabilizing the structure of the spliceosome catalytic core and docking of the branch helix into the active site, producing 5'-exon and lariat intron-3'-intermediates.

3702:AT1G02520
gene id: 3702:AT1G02520
uniprot id: A0A178WK73
uniprot id: Q9FWX7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G49310
gene id: 3702:AT5G49310
uniprot id: Q9FJ09
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the importin alpha family.
messages: Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope.
messages: Forms a complex with importin subunit beta-1.
messages: Nucleus envelope

3702:AT5G02540
gene id: 3702:AT5G02540
uniprot id: F4KCF2
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT5G58440
gene id: 3702:AT5G58440
uniprot id: Q8L5Z7
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sorting nexin family.
messages: Cytoplasm
messages: Endosome membrane
messages: Homodimer. Heterodimer with SNX1 or SNX2A. Component of the retromer complex which consists of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C), VPS5/17 (SNX1 or SNX2A or SNX2B).
messages: Plays a role in vesicular protein sorting (By similarity). Acts at the crossroads between the secretory and endocytic pathways. Is involved in the endosome to vacuole protein transport and, as component of the membrane-associated retromer complex, is also involved in endosome-to-Golgi retrograde transport (By similarity). Also involved in the efficient sorting of seed storage protein globulin 12S.
messages: Prevacuolar compartment membrane
messages: Reduced rosette size and inflorescence length as well as root gravitropism defects in snx2a and snx2b double mutant. Accumulation of storage protein globulin 12S in dry seeds.
messages: The PX domain binds phosphatidylinositol 3-phosphate which is necessary for peripheral membrane localization.
messages: Ubiquitously expressed but at a lower level in flowers, siliques, and senescing leaves.
messages: trans-Golgi network membrane

3702:AT2G43390
gene id: 3702:AT2G43390
uniprot id: A0A178VN18
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G20585
gene id: 3702:AT2G20585
uniprot id: A0A178VQF9
uniprot id: Q93ZJ3
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Failure of fusion of the polar nuclei during megagametogenesis.
messages: Mitochondrion
messages: Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G16080
gene id: 3702:AT1G16080
uniprot id: A0A178WL48
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G55880
gene id: 3702:AT3G55880
uniprot id: A0A384LHH2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G17710
gene id: 3702:AT5G17710
uniprot id: A0A178U8H4
uniprot id: Q94K56
uniprot id: Q9XQC7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GrpE family.
messages: Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.
messages: Mitochondrion matrix

3702:AT3G20950
gene id: 3702:AT3G20950
uniprot id: Q9LIG8
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G55750
gene id: 3702:AT3G55750
uniprot id: A0A178V8C0
uniprot id: P51422
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL33 family.

3702:AT1G11840
gene id: 3702:AT1G11840
uniprot id: A0A178W7B0
uniprot id: O65398
names: Caution
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the glyoxalase I family.
messages: Binds 1 zinc ion per subunit. In the homodimer, two zinc ions are bound between subunits.
messages: Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
messages: Homodimer.
messages: Phosphorylated by SnRK2.8.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G72630
gene id: 3702:AT1G72630
uniprot id: A0A178WCV4
uniprot id: Q94BS8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EARLY FLOWERING 4 family.
messages: Component of the central CCA1/LHY-TOC1 feedback loop in the circadian clock that promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles.
messages: Follows a light-dependent circadian-regulated expression with a peak at midday, about 6 hours after dawn.
messages: Homodimer.
messages: Nucleus

3702:AT3G02960
gene id: 3702:AT3G02960
uniprot id: A0A654F546
uniprot id: Q9M8T7
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT1G15080
gene id: 3702:AT1G15080
uniprot id: A0A7G2DTU4
uniprot id: Q9XI60
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PA-phosphatase related phosphoesterase family.
messages: Constitutively expressed. Not induced by stress, mastoparan or hypersensitive response elicitor harpin. Down-regulated by ABA.
messages: Expressed in roots, stems, leaves, buds, flowers and siliques.
messages: May play a general 'housekeeping role' in lipid metabolism. Exhibits both diacylglycerol pyrophosphate (DGPP) phosphatase and phosphatidate (PA) phosphatase activities with no preference for either substrate. May play a role downstream of the ABA signaling pathway during seed germination and in stomatal movement in leaves.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants show hypersensitivity to ABA and significant PA accumulation during seed germination.
messages: PA phosphatase activity not inhibited by N-ethylmaleimide.

3702:AT3G55480
gene id: 3702:AT3G55480
uniprot id: F4IWW1
uniprot id: Q9M2T1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 3 (AP-3) is a heterotetramer composed of two large adaptins (delta-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes large subunit family.
messages: Cytoplasm
messages: Cytoplasmic vesicle membrane
messages: Golgi apparatus
messages: No obvious phenotype except defective lytic vacuoles with altered morphology and accumulation of proteins.
messages: Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles.

3702:AT2G35660
gene id: 3702:AT2G35660
uniprot id: F4IKT4
uniprot id: Q9ZQN9
names: Similarity
messages: Belongs to the 3-hydroxybenzoate 6-hydroxylase family.

3702:AT1G76320
gene id: 3702:AT1G76320
uniprot id: A0A178WLY2
uniprot id: A0A178WNR6
uniprot id: A0A384KV74
uniprot id: Q6NQJ7
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT3G27960
gene id: 3702:AT3G27960
uniprot id: Q9LII8
names: Similarity
messages: Belongs to the kinesin light chain family.

3702:AT1G07650
gene id: 3702:AT1G07650
uniprot id: C0LGE0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G24062
gene id: 3702:AT1G24062
uniprot id: Q2V4L5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G54180
gene id: 3702:AT3G54180
uniprot id: A0A178VIJ9
uniprot id: P25859
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Highly expressed in guard cells and stomatal precursor cells of cotyledons. Expressed in roots, stems, flowers and siliques.
messages: Interacts with CKS1 (PubMed:9276444, PubMed:11319029). Interacts with CYCU3-1 (PubMed:15197472). Interacts with SIM, SMR1 and SMR2 (PubMed:20706207).
messages: May control G2/M (mitosis) phase progression. Plays a role in regulating seedling growth in darkness via regulation of hypocotyl cell elongation and cotyledon cell development. Plays a role in stomatal development. Required to suppress endoreduplication. Together with CDKB1-2, promotes both the last division in the stomatal cell lineage as well as the number of stomata (PubMed:20675570). In collaboration with MYB124 and MYB88, restrict the G1/S transition and chloroplast and nuclear number during stomatal formation, and normally maintain fate and developmental progression throughout the stomatal cell lineage (PubMed:24123248, PubMed:24687979).
messages: No apparent stomatal abnormalities. The double mutant cdkb1;1 cdkb1;2 has a reduced number of abnormal stomata consisting in single guard cells (GC) (PubMed:20675570, PubMed:24123248, PubMed:24687979). CDKA-1 partially rescue abnormal stomata phenotype of cdkb1;1 cdkb1;2 (PubMed:24687979). The quadruple mutant flp-1 myb88 cdkb1;1 cdkb1;2 has a reduced number of large single guard cells blocked at mitosis, with strongly altered shape and size and characterized by enlarged nucleus due to endomitosis and endocycling, as well as extensive chloroplast replication (PubMed:24123248).
messages: Nucleus
messages: Phosphorylation at Thr-14 or Tyr-15 inactivates the enzyme, while phosphorylation at Thr-176 activates it.
messages: Preferentially expressed in the S and G2 phases. Expressed in actively dividing cells: root and shoot apical meristems, leaf primordia and emerging lateral root meristem. Expressed in light-grown seedlings from 1 up to 7 days after germination with a peak at 2 and 3 days. Observed in late guard mother cells (GMC), newly formed guard cells, and immature stomata, thus being expressed just before and after the symmetric division of stomatal differentiation (PubMed:20675570).
messages: Repressed by MYB88 and MYB124 during stomatal development.

3702:AT2G37630
gene id: 3702:AT2G37630
uniprot id: O80931
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A C-terminal domain (252-356) is required for dimerization.
messages: Circadian-regulation with an afternoon peak in long days and with a broad night peak in short days (PubMed:21950734). Expression of AS1 in stem cells of the shoot apical meristem is prevented by SHOOT MERISTEMLESS (STM). Expression is activated by GTE6 during leaf morphogenesis (PubMed:16166385).
messages: Expressed in roots, stems, leaves, flowers, siliques and in lateral organ promordia (PubMed:17559509). Found in the inner domain between the adaxial and abaxial domains of leaves (PubMed:17559509). Expressed in the phloem tissues of leaves, cotyledons, hypocotyls, and roots (PubMed:21950734).
messages: Homodimer (PubMed:12750468, PubMed:23271976). Heterodimer with LBD6 (PubMed:23271976). Interacts with LBD6/AS2, HIRA, a probable histone chaperone, and RIK, a predicted RNA binding protein (PubMed:12874130, PubMed:16243907). Part of the AS1 repressor complex composed of AS1, LBD6/AS2 and HDA6 (PubMed:23271976). Interacts with CO (PubMed:21950734).
messages: Nucleus
messages: Plants with double mutations in this protein and in RH10 or AS2 protein have abaxialized filamentous and trumpet-like leaves at high temperatures. In double mutants, shapes of epidermal cells of the filamentous leaves are simple and rectangular, similar to those of a petiole, but different from those of flat leaves of wild-type plants.
messages: Preferential expression in young and immature plant tissues. In embryos, expressed from the late globular stage onwards. After germination, detected in leaf founder cells and on flowering, in primordia of all floral organs.
messages: Transcription factor required for normal cell differentiation. Positively regulates LATERAL ORGAN BOUNDARIES (LOB) within the shoot apex, and the class III HD-ZIP genes REV, PHB, and PHV. Interacts directly with ASYMMETRIC LEAVES 2 (LBD6/AS2) to repress the knox homeobox genes BP/KNAT1, KNAT2, and KNAT6 and the abaxial determinants ARF3/ETT, KAN2 and YAB5. May act in parallel with the RDR6-SGS3-AGO7 pathway, an endogenous RNA silencing pathway, to regulate the leaf morphogenesis (PubMed:11076771, PubMed:11140682, PubMed:11882937, PubMed:12750468, PubMed:16006579, PubMed:16699177, PubMed:17395603, PubMed:17559509, PubMed:23271976). Binds directly to KNAT1, KNAT2, and KNATM chromatin, regulating leaf development (PubMed:23271976). LBD6 is required for this binding (PubMed:23271976). Positive regulator of flowering that binds to the promoter of FT (PubMed:21950734). Regulates FT expression by forming a functional complex with CO (PubMed:21950734). Involved in leaf polarity establishment by functioning cooperatively with NUCL1 to repress abaxial genes ARF3, ARF4, KAN1, KAN2, YAB1 and YAB5, and the knox homeobox genes KNAT1, KNAT2, KNAT6, and STM to promote adaxial development in leaf primordia at shoot apical meristems at high temperatures (PubMed:27334696).

3702:AT3G11440
gene id: 3702:AT3G11440
uniprot id: A0A178VKX5
uniprot id: Q9FR97
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: In germinating seeds, present in the root tip and in a linear array of up to 20 to 30 cells above the root tip. Strongly expressed in the inflorescence apex, and, to some extent, in the inflorescence stem, the vascular tissue, and the vascular tissue in leaf primordia (PubMed:11743113). In flowers, expressed in sepals, style, receptacle, anther filaments, and connective but not in anthers themselves (PubMed:15722475).
messages: Mostly expressed in roots (e.g. root tips), stems, pollen, shoot apices, flowers and floral shoot tips, and, to a lower extent, in leaves and siliques.
messages: Nucleus
messages: Reduced expression levels of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. The triple mutant myb33 myb65 myb101 has a male sterility and exhibits slower protein storage vacuoles (PSVs) vacuolation rate in aleurone layers upon seed germination (PubMed:20699403). The myb33 myb65 double mutant is defective in anther development, with a tapetum undergoing hypertrophy at the pollen mother cell stage, resulting in premeiotic abortion of pollen development and male sterility. This sterility is conditional, fertility being increased both under higher light or lower temperature conditions (PubMed:15722475).
messages: Repressed by microRNA159 (miR159a and miR159b) in vegetative tissues (PubMed:20699403, PubMed:17916625, PubMed:15226253). Specific expression in floral organs and in the shoot apices is regulated via miR159-mediated degradation (PubMed:15722475). Slightly induced by ethylene and salicylic acid (PubMed:16463103).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional activator of alpha-amylase expression that binds to 5'-CAACTGTC-3' motif in target gene promoter (PubMed:11743113). In vegetative tissues, inhibits growth by reducing cell proliferation. Promotes the expression of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. Together with MYB33 and MYB101, promotes the programmed cell death (PCD) the vacuolation of protein storage vacuoles (PSVs) in the aleurone layers during seed germination (PubMed:20699403). Together with MYB33, facilitates anther and tapetum development (PubMed:15722475).
messages: Transcriptional activator of alpha-amylase expression.

3702:AT2G29730
gene id: 3702:AT2G29730
uniprot id: O82383
uniprot id: W8PVN2
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses quercetin 3-O-glucosyltransferase activity in vitro.

3702:AT2G22920
gene id: 3702:AT2G22920
uniprot id: A0A1P8B1W3
uniprot id: F4IKI5
uniprot id: O81009
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in roots.
messages: May be due to a competing donor splice site.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT1G33790
gene id: 3702:AT1G33790
uniprot id: A0A1P8AS89
uniprot id: A0A1P8AS93
uniprot id: A0A1P8AS94
uniprot id: A0A1P8ASF2
uniprot id: Q9LQ31
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT2G19210
gene id: 3702:AT2G19210
uniprot id: O65924
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G27820
gene id: 3702:AT1G27820
uniprot id: A0A7G2DWE9
uniprot id: Q9SFX6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.

3702:AT4G32620
gene id: 3702:AT4G32620
uniprot id: A0A654FUW6
uniprot id: F4JV27
uniprot id: F4JV28
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enhancer of polycomb family.
messages: Nucleus

3702:AT5G45050
gene id: 3702:AT5G45050
uniprot id: A0A1P8BH45
uniprot id: A0A1P8BH86
uniprot id: F4KBS5
uniprot id: Q9FL92
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the disease resistance TIR-NB-LRR family.
messages: Interacts with RPS4B. RPS4B-RRS1B heterodimer interacts with the bacterial effectors AvrRps4 and PopP2.
messages: Nucleus
messages: The TIR domain is a signaling domain involved in cell death induction. It is involved in heterodimerization of RPS4B with RRS1B, but other domains also contribute to the interaction.
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Acts also as a disease resistance protein that specifically recognizes the AvrRps4 type III effector avirulence protein from P.syringae. Heterodimerization with RPS4B is required to form a functional complex to recognize AvrRps4 and to mediate the hypersensitive response (PubMed:25744164).

3702:AT2G40300
gene id: 3702:AT2G40300
uniprot id: A0A654F5U8
uniprot id: Q9S756
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ferritin family.
messages: Oligomer of 24 subunits. There are two types of subunits: L (light) chain and H (heavy) chain. The major chain can be light or heavy, depending on the species and tissue type. The functional molecule forms a roughly spherical shell with a diameter of 12 nm and contains a central cavity into which the insoluble mineral iron core is deposited (By similarity).
messages: Oligomer of 24 subunits. There are two types of subunits: L (light) chain and H (heavy) chain. The major chain can be light or heavy, depending on the species and tissue type. The functional molecule forms a roughly spherical shell with a diameter of 12 nm and contains a central cavity into which the insoluble mineral iron core is deposited.
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (By similarity).
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
messages: chloroplast

3702:AT5G36690
gene id: 3702:AT5G36690
uniprot id: P0DKC0
uniprot id: P0DKC1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant Proton pump-interactor protein family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: May regulate plasma membrane ATPase activity.

3702:AT1G15530
gene id: 3702:AT1G15530
uniprot id: A0A178WKM3
uniprot id: Q9M9E0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici and to the bacteria Pseudomonas syringae, characterized by stronger necrotic symptoms and higher bacterial proliferation.
messages: Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici and to the pathogenic bacteria Pseudomonas syringae.
messages: Membrane

3702:AT4G22745
gene id: 3702:AT4G22745
uniprot id: A0A178UWM3
uniprot id: Q5XEN5
names: Caution
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Mostly expressed in flowers and buds.
messages: Nucleus
messages: Probable transcriptional regulator.
messages: The methyl-CpG-binding domain (MBD) functions both in binding to methylated DNA and in protein interactions.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G32930
gene id: 3702:AT2G32930
uniprot id: O48772
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G52780
gene id: 3702:AT5G52780
uniprot id: Q9LTD9
names: Disruption Phenotype
names: Miscellaneous
names: Subcellular Location Annotation
messages: Has no redundant functions with PAM68.
messages: Membrane
messages: No visible phenotype.

3702:AT1G10360
gene id: 3702:AT1G10360
uniprot id: A0A5S9TPH6
uniprot id: Q9FUS9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT3G20270
gene id: 3702:AT3G20270
uniprot id: Q8VYC2
names: Similarity
messages: Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP (TC 1.C.40) family.

3702:AT2G34700
gene id: 3702:AT2G34700
uniprot id: A0A178W0Z3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79870
gene id: 3702:AT1G79870
uniprot id: A0A178W4H7
uniprot id: Q9CA90
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GyaR subfamily.
messages: Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate (HP) into glycolate and glycerate in the cytoplasm, thus providing a cytosolic bypass to the photorespiratory core cycle. Mostly active in the presence of NADPH and hydroxypyruvate.
messages: Cytoplasm
messages: Elevated levels of hydroxypyruvate and other metabolites in leaves. Under long-day conditions, slightly altered photosynthetic gas exchange. When associated with HPR1 disruption, strong air-sensitivity and dramatic reduction in photosynthetic performance.
messages: Homodimer.
messages: Strongly inhibited by oxalate.

3702:AT5G47540
gene id: 3702:AT5G47540
uniprot id: A0A384KVT7
uniprot id: B3LFB8
uniprot id: Q9FGK3
names: Caution
names: Similarity
messages: Belongs to the Mo25 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G24040
gene id: 3702:AT1G24040
uniprot id: Q9LR91
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autoacetylated.
messages: Belongs to the acetyltransferase family. GNAT subfamily.
messages: Expressed in green tissues.
messages: Oligomer.
messages: Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA), with a large spectrum of modified N-termini, including methionine, alanine, serine and to a lower extent threonine and valine as substrates, and epsilon-lysine acetylation (KA).
messages: chloroplast

3702:ArthCp027
gene id: 3702:ArthCp027
uniprot id: A0A1B1W4V1
uniprot id: P56751
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Mitochondrion membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3702:AT5G37370
gene id: 3702:AT5G37370
uniprot id: A0A1P8BAH4
uniprot id: A0A1P8BAH8
uniprot id: A0A384KYH6
uniprot id: A0A384LME1
uniprot id: A0A5S9Y932
uniprot id: C0Z324
uniprot id: F4K753
uniprot id: F4K754
uniprot id: Q8RWB1
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PRP38 family.
messages: May be required for pre-mRNA splicing (Probable). Confers salt tolerance to LiCl and NaCl (PubMed:12047626).
messages: Mostly expressed in siliques and leaves, also present in seedlings, flowers and stems, and, at low levels, in roots.
messages: Nucleus
messages: Phosphorylated.
messages: Required for pre-mRNA splicing.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G24540
gene id: 3702:AT1G24540
uniprot id: Q9FYL0
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G48080
gene id: 3702:AT3G48080
uniprot id: Q9SU71
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a second functional copy of EDS1. Can mediate HRT-mediated resistance to turnip crinkle virus.
messages: Cytoplasm
messages: Ecotypes cv. Landsberg erecta and cv. Di-17 express a probably non-functional truncated protein comprising of only the first 162 amino acids. This protein is not expressed in cv. Wassilewskija.
messages: Interacts (via N-terminus) with PAD4 and SAG101 (PubMed:22072959). Part of a nuclear complex made of EDS1, PAD4 and SAG101, that can be redirected to the cytoplasm in the presence of an extranuclear form of EDS1 (PubMed:22072959). Does not interact with itself or with EDS1 (PubMed:22072959).
messages: No effect on RPS4-mediated resistance against avrRps4 bacteria, due to the redundancy with EDS1.
messages: Nucleus
messages: Up-regulated by salicylic acid or upon turnip crinkle virus infection.

3702:AT2G39330
gene id: 3702:AT2G39330
uniprot id: A0A1P8AXC4
uniprot id: O80948
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the jacalin lectin family.
messages: Component of the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.
messages: Polymerizer-type lectin that may facilitate the correct polymerization and activation of BGLU23/PYK10 upon tissue damage.
messages: Smaller PYK10 complexes.

3702:AT3G10700
gene id: 3702:AT3G10700
uniprot id: Q8VYG2
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the GHMP kinase family.
messages: Expressed in roots, stems, leaves, flowers and young siliques. Higher expression in the elongating middle stem region than in the lower or upper stem region.
messages: Inhibited by EDTA and ADP.
messages: Magnesium. Can also use other divalent cations like manganese or calcium.
messages: Sugar-1-kinase with a strict substrate specificity for the alpha-anomeric configuration of D-galacturonic acid (D-GalA) and ATP. Involved in the biosynthesis of UDP-galacturonic acid (UDP-GalA) from the salvaged GalA that is released during growth-dependent cell wall restructuring.

3702:AT1G08800
gene id: 3702:AT1G08800
uniprot id: F4HXQ7
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Endomembrane system
messages: Expressed in leaf epidermal cells, roots and root hairs.
messages: Interacts with myosin XI-K, XI-I and XI-1.
messages: Membrane-anchored myosin receptors that define a distinct, plant-specific transport vesicle compartment.
messages: No visible phenotype. Myob1 and myob2 double mutant has no visible phenotype, but a delayed flowering. Myob1, myob2 and myob3 triple mutant has a significant height reduction and a delayed flowering. Myob1, myob2, myob3 and myob4 quadruple mutant has a significant height reduction, a reduced rosette diameter and a delayed flowering.
messages: The GTD-binding domain is sufficient for myosin binding. The transmembrane region (1-61) is sufficient for the membrane targeting.

3702:AT1G21140
gene id: 3702:AT1G21140
uniprot id: A0A178W9M6
uniprot id: Q9LPU9
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CCC1 family.
messages: Can mediate sequestration of iron ions into vacuoles when expressed in the yeast ccc1 mutant.
messages: Down-regulated under iron deficiency (PubMed:21411332, PubMed:25360591). Induced by iron supply (PubMed:25360591).
messages: Expressed in the vascular bundles of the shoot and the stele of the root. Expressed in inflorescences and at lower levels in leaves.
messages: Membrane
messages: Probable vacuolar iron transporter involved in the transfer of iron ions from the cytosol to the vacuole for intracellular iron storage (PubMed:25360591). Involved in regulation of cellular iron homeostasis (PubMed:25360591). Vacuolar iron storage is required for seed embryo and seedling development (PubMed:25360591).
messages: Vacuole membrane

3702:AT1G20693
gene id: 3702:AT1G20693
uniprot id: A0A5S9VCX2
uniprot id: O49596
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HMGB family.
messages: Binds preferentially double-stranded DNA. Confers sensitivity to salt and drought stresses.
messages: Mostly expressed in cotyledons, hypocotyls, leaves, and flowers (excluding pedicels), also present in roots and stems.
messages: Nucleus
messages: Up-regulated by cold stress, but down-regulated by drought and salt stress.
messages: cytosol

3702:AT4G36790
gene id: 3702:AT4G36790
uniprot id: O23203
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Spinster (TC 2.A.1.49) family.
messages: Membrane

3702:AT1G13460
gene id: 3702:AT1G13460
uniprot id: Q8LF36
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B56 family.
messages: Highly expressed in dry seeds. Expressed in roots, cotyledons, rosette leaves and flowers.
messages: Induced by epibrassinolide.
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (By similarity). Interacts with BZR1 (PubMed:21258370). Interacts with PP2A2, PP2A5 and PP2AA2 (PubMed:25489022).
messages: Peroxisome
messages: Reduced plant size and fresh weight.
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment (By similarity). Associates with the serine/threonine-protein phosphatase PP2A catalytic subunit C and regulatory subunit A to positively regulates beta-oxidation of fatty acids and protoauxins in peroxisomes by dephosphorylating peroxisomal beta-oxidation-related proteins (PubMed:25489022). Required for the formation of the PP2A holoenzyme that negatively regulates brassinosteroid signaling by dephosphorylating and inactivating BRI1 in the cytoplasm (PubMed:26517938).
messages: cytosol

3702:AT3G60340
gene id: 3702:AT3G60340
uniprot id: A0A384KPB2
uniprot id: Q9LY31
names: Similarity
messages: Belongs to the palmitoyl-protein thioesterase family.

3702:AT2G36880
gene id: 3702:AT2G36880
uniprot id: A0A178VXF8
uniprot id: Q9SJL8
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate (By similarity).
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate (By similarity). Can utilize magnesium, manganese or cobalt (in vitro) (By similarity).
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate (PubMed:12087191, PubMed:16365035). Involved in the biosynthesis of lignin (PubMed:11844113).
messages: Cytoplasm
messages: Homotetramer (By similarity). Interacts with GRF3.
messages: Inhibited by 5,5'-dithiobis-2-nitrobenzoic acid (DTNB) and N-ethylmaleimide (NEM) (in vitro).

3702:AT2G41997
gene id: 3702:AT2G41997
uniprot id: A8MQN0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G60420
gene id: 3702:AT1G60420
uniprot id: A0A654EJN4
uniprot id: O80763
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the nucleoredoxin family.
messages: Disruption of pollen tube growth in the pistil and reduction in the ability to target ovules.
messages: Probable thiol-disulfide oxidoreductase required for pollen tube growth and pollen function in the pistil. Seems not to be required for in vitro pollen tube growth. May be involved in the generation of lipid signaling molecules in pistil.

3702:AT1G63930
gene id: 3702:AT1G63930
uniprot id: A0A654EMC0
uniprot id: Q9CAK4
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Roh' means corner in Czech.
messages: Belongs to the ROH1 family.
messages: Interacts with EXO70A1 and EXO70C1 (PubMed:20618910, PubMed:28356503). Binds to EXO70C2 (PubMed:33519861, PubMed:28356503).
messages: Mainly expressed in cells expanding in a polar manner such as pollen and root hairs.
messages: Membrane
messages: Reduced pectin deposition leading to reduced seed coat mucilage thickness (PubMed:20618910). Characteristic pattern of pectin deposition to the corners of seed coat volcano cells (PubMed:20618910).
messages: Required for seed coat mucilage deposition.
messages: cytosol

3702:AT5G04347
gene id: 3702:AT5G04347
uniprot id: A0A1P8B9Z0
uniprot id: Q1G3H7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G66030
gene id: 3702:AT5G66030
uniprot id: Q8S2T0
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Golgi apparatus
messages: Golgi matrix protein playing a role in tethering of vesicles to Golgi membranes and in maintaining the overall structure of the Golgi apparatus.
messages: Interacts with the GTP-bound ARF3/ARL1, but not with the GDP-bound ARF3/ARL1.
messages: The C-terminal GRIP domain (711-788) is necessary and sufficient for Golgi targeting.

3702:AT5G06140
gene id: 3702:AT5G06140
uniprot id: Q9FG38
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sorting nexin family.
messages: Cytoplasm
messages: Endosome membrane
messages: Homodimer. Heterodimer with SNX2A or SNX2B. Component of the retromer complex which consists of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C), VPS5/17 (SNX1 or SNX2A or SNX2B). Interacts with BLOS1 and BLOS2.
messages: Plays a role in vesicular protein sorting. Acts at the crossroads between the secretory and endocytic pathways. Is involved in the endosome to vacuole protein transport via its interaction with the BLOS1/2 proteins and, as component of the membrane-associated retromer complex, is also involved in endosome-to-Golgi retrograde transport. Required for the auxin-carrier protein PIN2 sorting to the lytic vacuolar pathway and the trafficking of several plasma membrane proteins. Also involved in the efficient sorting of seed storage protein globulin 12S.
messages: Prevacuolar compartment membrane
messages: Shorter primary roots, fewer secondary roots and an altered root gravitropic response. Accumulation of storage protein globulin 12S in dry seeds.
messages: The PX domain binds phosphatidylinositol 3-phosphate which is necessary for peripheral membrane localization.
messages: Ubiquitously expressed.
messages: trans-Golgi network membrane

3702:AT4G11820
gene id: 3702:AT4G11820
uniprot id: P54873
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. HMG-CoA synthase family.
messages: Defect in pollen adhesion to the stigma resulting in male sterility under normal growth conditions.
messages: Highly expressed in flower buds, pollen grains and anthers in the tapetal cells, at an intermediate levels in roots and weakly in leaves.
messages: This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. Devoided of acetoacetyl-CoA thiolase (AACT) activity. Required for the development of both tapetosomes and elaioplasts in tapetal cells and for pollen viability during pollen tube elongation.

3702:AT4G16370
gene id: 3702:AT4G16370
uniprot id: O23482
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.
messages: Expressed 2 to 4 hours after fertilization in the embryo sac and subsequently in developing maternal tissues. By the globular stage, expression is observed in the developing endosperm, integument layers, the embryo proper, and the suspensor of the developing embryo. From the heart stage onward, expression observed in the embryo but neither in the suspensor nor in the endosperm and integument tissues.
messages: Highly induced by iron, copper and manganese deficiencies.
messages: May be involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner. Acts also as a metal transporter that could be a component of the copper transport machinery. Essential for early embryo development.
messages: Membrane
messages: Strong expression in flowers, leaves and roots. Preferentially expressed in the vascular tissues of seedlings and mature plants as well as in pollen and developing embryos.

3702:AT3G50410
gene id: 3702:AT3G50410
uniprot id: A0A178VFT5
uniprot id: Q39088
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By auxin and salicylic acid (SA).
messages: Constitutively expressed in the whole plant.
messages: Interacts with OBF4 or OBF5.
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements.

3702:AT5G62630
gene id: 3702:AT5G62630
uniprot id: Q94F08
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PQQ oxidoreductase GdhB family.
messages: Cell membrane

3702:AT4G37050
gene id: 3702:AT4G37050
uniprot id: A0A654FW91
uniprot id: O23181
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the patatin family.
messages: By abscisic acid (ABA) or phosphate deficiency in roots.
messages: Cytoplasm
messages: Expressed specifically in the stigma, ovary and funiculus of the ovary.
messages: Lipolytic acyl hydrolase (LAH).
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit an impaired response to phosphate deficiency during root development.
messages: Possesses non-specific lipolytic acyl hydrolase (LAH) activity. Catalyzes the hydrolysis of the neutral lipids monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and phosphatidylglycerol (PG), and less efficiently the polar lipids phosphatidylcholine (PC) and phosphatidylinositol (PI), but not the storage lipid triacylglycerol (TAG). May play a role in root development.
messages: The nitrogen atoms of the two glycine residues in the GGXR motif define the oxyanion hole, and stabilize the oxyanion that forms during the nucleophilic attack by the catalytic serine during substrate cleavage.

3702:AT1G52220
gene id: 3702:AT1G52220
uniprot id: A0A178WBD4
uniprot id: A0A1P8ASY4
uniprot id: Q9M812
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CURT family.
messages: Determines thylakoid architecture by inducing membrane curvature.
messages: Homo- and heterodimers and trimers. Interacts with PSAD2.
messages: Membrane
messages: No effect on growth behavior, leaf coloration, grana stacks or photochemical efficiency of photosystem II. Curt1a, curt1b, curt1c and curt1d quadruple mutant shows disorganized thylakoids with extended stretches of unstacked membranes and broader stacks made up of fewer layers.
messages: chloroplast thylakoid membrane

3702:AT3G06930
gene id: 3702:AT3G06930
uniprot id: Q84W92
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
messages: Chimeric cDNA. Its C-terminal part is derived from gene At1g80500, which oded for an intracellular transporter.
messages: Cytoplasm
messages: Increased sensitivity to paraquat-triggered oxidative stress. Slower root elongation after cadmium ion CdCl(2) treatment. Decreased histone H3 methylation (H3R17me2a) leading to reduced levels of APX1 and GPX1.
messages: Interacts with PQT3 in the nucleus.
messages: May be due to competing acceptor splice site.
messages: Methylates (mono- and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in several proteins involved in DNA packaging, transcription regulation, and mRNA stability (By similarity). Recruited to promoters upon gene activation, methylates histone H3 and activates transcription via chromatin remodeling (PubMed:27676073). Positive regulator in the oxidative stress tolerance that promotes the expression of enzymes preventing oxidative stress such as APX1 and GPX1 by histone methylation (H3R17me2a). Confers tolerance to cadmium CdCl(2) and salt NaCl stresses (PubMed:27676073).
messages: Nucleus
messages: Targeted by PQT3 to degradation via 26S proteasome. Induced by proteasome inhibitor MG132 treatment (at protein level).
messages: Ubiquitinated by PQT3.

3702:AT5G38250
gene id: 3702:AT5G38250
uniprot id: F4KA51
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT3G12690
gene id: 3702:AT3G12690
uniprot id: Q9LTW5
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by PDPK1/PDK1.
messages: Autophosphorylated and phosphorylated by PDPK1/PDK1.
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Functions redudantly with AGC1-7 as signaling component in the pollen tube. Required for polarized growth of pollen tubes.
messages: Interacts with PDPK1/PDK1.
messages: No visible phenotype under normal growth conditions, but pollen of the double mutants agc1.5 and agc1.7 is impaired in polarized growth of pollen tube.
messages: Specifically expressed in pollen grains.

3702:AT4G11080
gene id: 3702:AT4G11080
uniprot id: Q9T012
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HMGB family.
messages: Nucleus

3702:AT3G59610
gene id: 3702:AT3G59610
uniprot id: Q9M1A7
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT4G01000
gene id: 3702:AT4G01000
uniprot id: Q9SV28
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SDE2 family.
messages: Cytoplasm
messages: Nucleus

3702:AT1G31450
gene id: 3702:AT1G31450
uniprot id: Q9C864
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G73080
gene id: 3702:AT1G73080
uniprot id: Q9SSL9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates pathogen-associated molecular pattern (PAMP)-inducible plant responses. Involved in PAMP-triggered immunity (PTI) signaling. Interacts with and phosphorylates the kinase BIK1, a central rate-limiting kinase in PTI signaling (PubMed:23431184).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with PEP1 and BAK1 (PubMed:16785433, PubMed:18824048, PubMed:20018402). Interacts with BIK1 and PBL1 (PubMed:23431184).
messages: N-glycosylated.

3702:AT1G26840
gene id: 3702:AT1G26840
uniprot id: A0A178WC62
uniprot id: Q9ZVH3
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ORC6 family.
messages: Component of the origin recognition complex (ORC) composed of at least ORC1 (ORC1A or ORC1B), ORC2, ORC3, ORC4, ORC5 and ORC6. ORC is regulated in a cell-cycle and development dependent manner. It is sequentially assembled at the exit from anaphase of mitosis and disassembled as cells enter S phase. Interacts directly with ORC2, ORC3, ORC4 and ORC5.
messages: Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
messages: Follow a cell-cycle regulation with a peak at the G1/S-phase (PubMed:16179646). Mostly expressed in siliques, flowers, flower buds and mature leaves, and, to a lower exent, in roots, leaves and stems (PubMed:16179646, PubMed:15358564).
messages: Nucleus
messages: Regulated by E2F (PubMed:16179646, PubMed:16126853). Accumulates rapidly after cell cycle reactivation by sucrose addition following cell cycle arrest mediated by sucrose deprivation (PubMed:16179646, PubMed:15358564).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G73060
gene id: 3702:AT1G73060
uniprot id: Q8H0W0
names: Caution
names: Subcellular Location Annotation
messages: An article reported a role in essential for photosystem II assembly; however, this paper was later retracted.
messages: chloroplast

3702:AT3G51630
gene id: 3702:AT3G51630
uniprot id: Q9SCU5
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.
messages: Interacts with AHK4.
messages: Plants display early flowering and altered expression of genes involved in the photoperiod flowering pathway, such as ELF4, TOC1, CO and FT.
messages: Regulates flowering time by modulating the photoperiod pathway.
messages: Was named WNK/'with no lysine(K)' because key residues for catalysis, including the lysine involved in ATP binding, are either not conserved or differ compared to the residues described in other kinase family proteins.

3702:AT5G13860
gene id: 3702:AT5G13860
uniprot id: A0A178UAW5
uniprot id: Q9FFY6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin-conjugating enzyme family. UEV subfamily.
messages: Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs).
messages: Component of the endosomal sorting required for transport complex I (ESCRT-I), composed of ELC, VPS28 and VPS37 (By similarity). Interacts with FREE1 (PubMed:25438943). Interacts with TOL9/TOM1D (PubMed:22639582).
messages: Endosome
messages: Prevacuolar compartment

3702:AT4G16650
gene id: 3702:AT4G16650
uniprot id: A0A178UUT3
uniprot id: Q8LPF8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT2G26660
gene id: 3702:AT2G26660
uniprot id: O48781
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: May inhibit PHR1 DNA-binding activity in a Pi-dependent manner.
messages: No effect on Pi accumulation, due to the redundancy with SPX1. Spx1 and spx2 double mutants have an increased root-to-shoot growth ratio and a reduced rot hair size when grown in Pi-sufficient conditions.
messages: Nucleus
messages: Up-regulated under phosphate starvation.

3702:AT5G47980
gene id: 3702:AT5G47980
uniprot id: Q9FI40
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant acyltransferase family.
messages: Constitutes with three contiguous genes an operon-like gene cluster that is involved in the thalianol pathway.
messages: Expressed primarily in the root epidermis.
messages: Probably involved in the modification of desaturated thalian-diol.

3702:AT3G45830
gene id: 3702:AT3G45830
uniprot id: A0A654FI82
uniprot id: Q9LZU7
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G11520
gene id: 3702:AT3G11520
uniprot id: A0A1I9LQ45
uniprot id: Q39069
names: Developmental Stage
names: Similarity
names: Tissue Specificity
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Expressed in roots, stems and flowers.
messages: Starts to be expressed at the end of S phase, reaches a peak at mitosis and then decreases.

3702:AT4G13700
gene id: 3702:AT4G13700
uniprot id: A0A1P8B627
uniprot id: Q6TPH1
names: Cofactor
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate.
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 Mn(2+) ion per subunit.
messages: First observed in the floral apical meristem (FAP). In flowers, observed in petals and anthers, particularly in anther filaments.
messages: Homodimer.
messages: Secreted
messages: Specifically expressed in flowers.

3702:AT1G61310
gene id: 3702:AT1G61310
uniprot id: O64789
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT4G35280
gene id: 3702:AT4G35280
uniprot id: O65499
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by the transcription factor DUO1.
messages: Expressed exclusively in pollen.
messages: Expressed in the germ cells following microspore division, increases during development and persists into mature pollen.
messages: Interacts (via the EAR motif) with TPL.
messages: Mediates the regulation of male germ cell division by DUO1.
messages: Nucleus

3702:AT4G03510
gene id: 3702:AT4G03510
uniprot id: O64425
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase that promotes the ubiquitination and proteasomal degradation of aquaporin PIP2-1. Forms a ubiquitin ligase complex in cooperation with the E2 enzymes UCB8/UCB10.
messages: Endoplasmic reticulum membrane
messages: No visible phenotype and no effect on drought stress response, probably due to the redundancy with RMA2 and RMA3.
messages: The C-terminal transmembrane is dispensable for the ubiquitin ligase activity in vitro, but is critical for correct subcellular localization and substrate recognition in vivo.
messages: The RING-type zinc finger domain is required for E3 ligase activity.
messages: Ubiquitous. Highly expressed in roots.

3702:AT1G29490
gene id: 3702:AT1G29490
uniprot id: Q29Q96
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals.

3702:AT1G29170
gene id: 3702:AT1G29170
uniprot id: A0A178WGL1
uniprot id: B3H466
uniprot id: B3H7L7
uniprot id: Q9LP46
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activates the Arp2/3 complex and binds actin through the C-terminal VCA (verprolin homology/cofilin homology/acidic) domain consisting of a WH2 domain followed by an Arp2/3-binding acidic motif (A), separated by a conserved linker region (C). Binds BRK1 through the N-terminal Scar homology domain (SHD).
messages: Belongs to the SCAR/WAVE family.
messages: Binds BRK1. Interacts with SPK1, ABI1, ABI2, ABI3 and ABI4.
messages: Expressed in expanding cotyledons, expanding leaves and expanding siliques containing developing embryos. Detected in unopened flower buds. Reduced expression in mature leaves and mature cotyledons.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex. Regulates trichome branch positioning and expansion.
messages: cytoskeleton

3702:AT4G15415
gene id: 3702:AT4G15415
uniprot id: A0A1P8B4K9
uniprot id: A0A384KCM2
uniprot id: Q0WNY8
uniprot id: Q8RW96
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B56 family.
messages: Belongs to the phosphatase 2A regulatory subunit.
messages: By heat shock.
messages: Expressed ubiquitously at low levels (PubMed:9128737). Expressed in roots, emerging lateral roots, cotyledons, leaves, floral stalks and flowers (PubMed:26012558).
messages: Nucleus
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (Probable). Interacts with BRI1 (PubMed:26517938). Interacts with IGMT1 and IGMT4 (PubMed:27598402). Interacts with ACO3 in the cytosol (PubMed:25307043).
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment (By similarity). Required for the formation of the PP2A holoenzyme that negatively regulates brassinosteroid signaling by dephosphorylating and inactivating BRI1 in the cytoplasm (PubMed:26517938). Seems to be functionally connected with CPR5 and may mediate the negative regulation of defense reactions and senescence under low irradiances. May contribute to the epigenetic regulation of defense gene expression (PubMed:21571669). Involved in the control of methoxylation of indole glucosinolates and formation of 4-methoxy- indol-3-yl-methyl glucosinolate in leaves, through direct interaction with indole glucosinolate methyltransferases (PubMed:27598402). Involved in growth regulation and stress signaling (PubMed:26012558). Involved in the regulation of reactive oxygen species (ROS) signaling and maintenance of cellular ROS homeostasis (PubMed:26012558, PubMed:25307043). Required to control the level of ACO3 phosphorylation in the cytoplasm. Regulates hydrogen peroxide metabolism by controlling the abundance of AOX1A and AXO3/AOX1D in leaf mitochondria (PubMed:25307043). May mediate dephosphorylation of CRT1 and promote the degradation of unfolded proteins in endoplasmic reticulum (ER) (PubMed:22041935). Involved in the regulation of flowering time by repressing FLC, the main flowering repressor gene (PubMed:23976921).
messages: The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
messages: Wrinkled leaves, stunted growth, delayed flowering and formation of age-dependent yellowing lesions (PubMed:21571669, PubMed:22041935, PubMed:23976921). Conditional phenotype with premature yellowing and constitutive reactive oxygen species (ROS) production in distinct peripheral areas of mature leaves when grown under moderate light intensity and low humidity. May partially evade the accumulation of H(2)O(2) via alternative oxidases (AOX) activity. Increased levels of AOX1A and AOX1D in leaf mitochondria. Increased level of ACO3 phosphorylation.
messages: cytosol

3702:AT3G16420
gene id: 3702:AT3G16420
uniprot id: O04314
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the jacalin lectin family.
messages: Component of the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.
messages: Cytoplasm
messages: Expressed exclusively in roots.
messages: Induced by NAI1 (at protein level).
messages: Inhibitor-type lectin that may regulate the correct polymerization of BGLU23/PYK10 upon tissue damage. Activates BGLU21, BGLU22 and BGLU23.
messages: PubMed:18467340 shows that PBP1 inhibits polymerization of PYK10 complex, while in PubMed:19965874, PBP1 activates purified PYK10.
messages: Reduced tissue damage-mediated BGLU23/PYK10 activation. Larger PYK10 complexes.

3702:AT3G13900
gene id: 3702:AT3G13900
uniprot id: A0A1I9LT85
uniprot id: A0A1I9LT86
uniprot id: A0A5S9XDB8
uniprot id: Q9LVK9
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Ala6 and ala7 double mutants are hypersensitive to temperature stress and are impaired in pollen fitness with an altered lipid composition and short and slow pollen tubes.
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
messages: Cell membrane
messages: Endomembrane system
messages: Involved in transport of phospholipids and in regulation of pollen plasma membrane lipid asymmetry.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT5G10570
gene id: 3702:AT5G10570
uniprot id: A0A5S9Y3C4
uniprot id: Q9LXA9
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in leaves and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT5G48240
gene id: 3702:AT5G48240
uniprot id: B3H5R1
uniprot id: B6EUA7
uniprot id: F4K087
names: Similarity
messages: Belongs to the RRP15 family.

3702:AT2G39975
gene id: 3702:AT2G39975
uniprot id: A0A178VZY4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G29670
gene id: 3702:AT1G29670
uniprot id: A0A178WMD1
uniprot id: A0A1P8ASL8
uniprot id: Q9C7N4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT1G72010
gene id: 3702:AT1G72010
uniprot id: A0A178W3Z1
uniprot id: Q9C7G4
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G61390
gene id: 3702:AT3G61390
uniprot id: Q8GZ84
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G31885
gene id: 3702:AT1G31885
uniprot id: A0A1P8AWT2
uniprot id: A0A1P8AWV8
uniprot id: Q9C6T0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.
messages: Membrane

3702:AT1G31050
gene id: 3702:AT1G31050
uniprot id: A0A178W315
uniprot id: A0A1P8ASA7
uniprot id: A0A1P8ASB7
uniprot id: A0A1P8ASD5
uniprot id: A0A1P8ASG1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G56440
gene id: 3702:AT3G56440
uniprot id: Q0WPK3
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat PROPPIN family.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Down-regulated during senescence.
messages: Expressed in roots, stems, flowers and leaves.
messages: Preautophagosomal structure membrane
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy (By similarity).
messages: The first protein part may form a beta-propeller domain involved in specific binding to phosphatidylinositol 3,5-bisphosphate (PIP2), leading to the association of the protein to the membrane.
messages: Vacuole membrane

3702:AT5G25610
gene id: 3702:AT5G25610
uniprot id: Q08298
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Tissue Specificity
messages: Acts to suppress chlorophyll degradation under moisture stress.
messages: Enhanced drought tolerance.
messages: Expressed during the early and middle stages of seed development (PubMed:8479424). Abundant throughout plant development in the aerial part of the plant (PubMed:25333723).
messages: Expressed in seed (PubMed:8479424). Highest expression in leaves and guard cells (PubMed:25333723).
messages: The BURP domain located at the C-terminus has not been identified in non-plant proteins.
messages: Up-regulated by dehydration, salt stress and abscisic acid (ABA). Not regulated by cold.

3702:AT1G48580
gene id: 3702:AT1G48580
uniprot id: A0A384KLI7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G19920
gene id: 3702:AT2G19920
uniprot id: A0A1P8B184
uniprot id: A0A1P8B192
uniprot id: A0A1P8B1A9
uniprot id: O82189
names: Function
names: Similarity
messages: Belongs to the RdRP family.
messages: Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).

3702:AT3G55780
gene id: 3702:AT3G55780
uniprot id: A0A5S9XLF6
uniprot id: F4IY34
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT4G34200
gene id: 3702:AT4G34200
uniprot id: A0A178UWV4
uniprot id: O49485
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Embryo lethal when homozygous.
messages: Involved in the plastidial phosphorylated pathway of serine biosynthesis (PPSB). Required for mature pollen development.
messages: Partially inhibited by 5 mM serine.
messages: Ubiquitous, but highly expressed in roots. Expressed in vasculature, root and shoot meristems, distal part of cotyledons and leaves, anther, stigma and pollen grains. Detected at the tip of the cotyledons in late embryos.
messages: Up-regulated in the aerial parts by dark treatment, high CO(2) levels and necrotrophic pathogen infection.
messages: chloroplast

3702:AT2G36620
gene id: 3702:AT2G36620
uniprot id: A0A178W0L3
uniprot id: Q42347
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein eL24 family.
messages: Interacts with the cauliflower mosaic virus transactivator TAV to form a TAV/60S complex (PubMed:11572778). Interacts with REIL1 AND REIL2 (PubMed:24603461).
messages: Might have an extraribosomal function in reinitiation of translation.

3702:AT5G48900
gene id: 3702:AT5G48900
uniprot id: A0A654G988
uniprot id: Q93WF1
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT1G72170
gene id: 3702:AT1G72170
uniprot id: A0A178W4U8
uniprot id: Q8GWC7
names: Function
names: Similarity
messages: Belongs to the MICOS complex subunit Mic10 family.
messages: Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.

3702:AT4G14480
gene id: 3702:AT4G14480
uniprot id: A0A178V2D7
uniprot id: O23304
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
messages: Defective in leaf temperature decreases and stomatal opening in response to blue light.
messages: Expressed in guard cells. Not detected in mesophyll cells.
messages: Interacts with PHOT1 in the presence and absence of blue light.
messages: Phosphorylated at Ser-348 by both PHOT1 and PHOT2.
messages: Ser/Thr protein kinase mediating a primary step for phototropin signaling in guard cells. Essential for stomatal opening.
messages: cytosol

3702:AT1G74000
gene id: 3702:AT1G74000
uniprot id: A0A654EQ99
uniprot id: P92976
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the strictosidine synthase family.
messages: Catalyzes the stereospecific condensation of tryptamine with secologanin to form strictosidine, the key intermediate of indole alkaloid biosynthesis.
messages: It is uncertain whether Met-1 or Met-2 is the initiator.
messages: Vacuole

3702:AT1G55090
gene id: 3702:AT1G55090
uniprot id: A0A178W7V9
uniprot id: Q9C723
names: Similarity
messages: In the C-terminal section; belongs to the NAD synthetase family.

3702:AT4G34910
gene id: 3702:AT4G34910
uniprot id: A0A654FVM3
uniprot id: Q9SW44
names: Domain
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily.
messages: RNA helicase.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT5G42870
gene id: 3702:AT5G42870
uniprot id: A0A1P8BB14
uniprot id: F4K347
uniprot id: Q9FMN2
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the lipin family.
messages: Contains 1 Asp-Xaa-Asp-Xaa-Thr (DXDXT) motif, a catalytic motif essential for phosphatidate phosphatase activity.
messages: Expressed in roots, leaves, stems, flowers, siliques, embryos and mature seeds.
messages: Magnesium-dependent phosphatidate phosphatase which catalyzes the dephosphorylation of phosphatidate to yield diacylglycerol. Acts redundantly with PAH1 to repress phospholipid biosynthesis at the endoplasmic reticulum (ER). May function indirectly as repressor of multiple enzymes involved in phospholipid biosynthesis. Is involved in the pathway of galactolipid synthesis in the ER, which is required for the membrane lipid remodeling, an essential adaptation mechanism to cope with phosphate starvation.
messages: No visible phenotype under normal growth conditions, but the double mutants pah1 and pah2-1 show reduced growth.
messages: cytosol

3702:AT3G50630
gene id: 3702:AT3G50630
uniprot id: A0A178VKK7
uniprot id: Q9SCR2
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CDI family. ICK/KRP subfamily.
messages: Binds and inhibits CYCD2-1/CDKA-1 complex kinase activity. Regulates cell division which is crucial for plant growth, development and morphogenesis. May regulate early lateral root initiation by blocking the G1/S phase transition. Controls the mitosis-to-endocycle transition and the onset of the endoreduplication cycle during leaf development through inhibition of mitotic CDKA-1 kinase complexes. Specifically targets CDKA-1.
messages: Down-regulated by auxin in roots.
messages: Highly expressed in root pericycle and cell suspension culture during cell cycle arrest. Expressed early in the G1 phase and then disappears. More abundant in endoreduplicating than in mitotically dividing tissues (at protein level).
messages: Phosphorylated.
messages: Specifically interacts with CDKA-1, but not with CDKB1-1.
messages: Treatment with auxin induces lateral root initiation. ICK2/KRP2 protein abundance is regulated post-transcriptionally through CDK phosphorylation and proteasomal degradation.
messages: nucleoplasm

3702:AT5G58380
gene id: 3702:AT5G58380
uniprot id: A0A5S9YHI7
uniprot id: Q9C562
names: Domain
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: By salt stress.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: Interacts with CBL4/SOS3.
messages: Mostly expressed in roots.
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT1G19180
gene id: 3702:AT1G19180
uniprot id: A0A178W7G1
uniprot id: Q3ED96
uniprot id: Q9LMA8
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Acetylated by Pseudomonas syringae HopZ1a.
messages: (Microbial infection) Interacts with the pathogenic Pseudomonas syringae HopZ1a protein.
messages: (Microbial infection) Triggered to degradation by the pathogenic Pseudomonas syringae HopZ1a protein in a COI1-dependent manner, thereby activating host jasmonate signaling.
messages: Belongs to the TIFY/JAZ family.
messages: Cell membrane
messages: Homo- and heterodimer. Interacts with TIFY10B/JAZ2, TIFY6B/JAZ3, TIFY6A/JAZ4, TIFY11A/JAZ5, TIFY11B/JAZ6, TIFY5A/JAZ8, TIFY7/JAZ9, TIFY9/JAZ10, TIFY3A/JAZ11 and TIFY3B/JAZ12. Interacts with COI1, MYC2, MYC3, MYC4, MYB21 and MYB24. Interacts (via tify domain) with AFPH2/NINJA.
messages: Nucleus
messages: Repressor of jasmonate responses.
messages: Repressor of jasmonate responses. Jasmonoyl-isoleucine (JA-Ile) specifically promotes COI1-TIFY10A/JAZ1 interaction. Interacts with COI1 and inositol pentakisphosphate to form a high-affinity jasmonates coreceptor.
messages: Srtongly expressed in root tips.
messages: The jas domain (202-227) is necessary and sufficient for interaction with COI1 and is required for TIFY 10A/JAI1 instability in response to jasmonate (PubMed:17675405, PubMed:18547396). The jas domain (202-227) is required for interaction with Pseudomonas syringae HopZ1a (By similarity).
messages: The jas domain is required for interaction with COI1.
messages: Ubiquitinated. Targeted for degradation by the SCF(COI1) E3 ubiquitin ligase-proteasome pathway during jasmonate signaling.
messages: Up-regulated by jasmonate, wounding and herbivory.

3702:AT5G10220
gene id: 3702:AT5G10220
uniprot id: Q9LX08
names: Domain
names: Induction
names: Similarity
names: Tissue Specificity
messages: A pair of annexin repeats may form one binding site for calcium and phospholipid.
messages: Belongs to the annexin (TC 1.A.31.1) family.
messages: Expressed in flowers.
messages: Up-regulated by heat shock, dehydration and salt stresses.

3702:AT1G24070
gene id: 3702:AT1G24070
uniprot id: Q9LR87
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like A subfamily.
messages: Golgi apparatus membrane
messages: Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall.

3702:AT3G16110
gene id: 3702:AT3G16110
uniprot id: Q66GQ3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.
messages: Belongs to the protein disulfide isomerase family.
messages: Endoplasmic reticulum lumen
messages: Widely expressed.

3702:AT5G27670
gene id: 3702:AT5G27670
uniprot id: A0A178UFF2
uniprot id: Q94F49
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Contains one SPKK motif which may interact with the minor groove of A/T-rich DNA sites. Phosphorylation of this motif may regulate DNA binding. This motif is reiterated in both termini of histone H1 and in the N-terminus of sea urchin histones H2B, but its presence in the C-terminus seems to be unique to plant H2A.
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Not ubiquitinated.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3702:AT2G41160
gene id: 3702:AT2G41160
uniprot id: A0A178VPB4
uniprot id: A0A1P8B0Y3
uniprot id: Q8RXQ2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane
messages: Might be an inactive rhomboid-type serine protease due to mismatches with the consensus active sites.
messages: Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G64230
gene id: 3702:AT1G64230
uniprot id: A0A178WCS7
uniprot id: F4I5B8
uniprot id: F4I5C0
uniprot id: Q94F47
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Expressed in seeds, pistils, siliques, hypocotyls and leaves.
messages: Interacts with SINAT5.

3702:AT2G23230
gene id: 3702:AT2G23230
uniprot id: O22184
names: Cofactor
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT5G09550
gene id: 3702:AT5G09550
uniprot id: A0A654G025
uniprot id: Q9LXC0
names: Function
names: Similarity
messages: Belongs to the Rab GDI family.
messages: Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP.

3702:AT2G25290
gene id: 3702:AT2G25290
uniprot id: F4IRM4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Carboxylate clamp type tetratricopeptide repeat protein that may act as a potential Hsp90/Hsp70 co-chaperone (PubMed:20856808). Contributes to polar growth of root hairs (PubMed:28096376).
messages: Cytoplasmic vesicle membrane
messages: Interacts with myosin XI-1 and XI-K.
messages: No clumped-chloroplasts phenotype (PubMed:22025705). 31% reduction in root hair growth (PubMed:28096376). Phox1 and phox4 double mutants show no clumped-chloroplasts phenotype, but a 46% reduction in root hair growth (PubMed:22025705, PubMed:28096376). Phox1, phox3 and phox4 triple mutants and phox1, phox2, phox3 and phox4 quadruple mutants show a 70% reduction in root hair growth (PubMed:28096376).

3702:AT5G48905
gene id: 3702:AT5G48905
uniprot id: A0A654G994
uniprot id: P82727
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G38600
gene id: 3702:AT5G38600
uniprot id: A0A1P8BEL3
uniprot id: A0A1P8BEL7
uniprot id: Q93YW4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZCCHC8 family.
messages: nucleoplasm

3702:AT2G19170
gene id: 3702:AT2G19170
uniprot id: A0A178VWQ1
uniprot id: O64481
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the peptidase S8 family.
messages: By methyl jasmonate.
messages: Expressed in roots, leaves and flowers of mature plants.

3702:AT4G24974
gene id: 3702:AT4G24974
uniprot id: B3H7A6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G19180
gene id: 3702:AT4G19180
uniprot id: F4JSH1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GDA1/CD39 NTPase family.
messages: By wounding and drought stress.
messages: Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates (By similarity). Involved in the regulation of pollen and anther development.
messages: Detected in mature pollen grains. Also expressed in more diverse tissues such as roots, leaves, stems, pistils and sepals. More particularly expressed in the vascular bundle.
messages: Membrane
messages: No visible phenotype. Apy6 and dapy7 double mutant exhibits late anther dehiscence and low male fertility. Pollen grains of double mutant are largely deformed in shape and in most cases, the cell walls of the pollen grains are interconnected.

3702:AT3G46680
gene id: 3702:AT3G46680
uniprot id: Q9SNB0
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT4G08310
gene id: 3702:AT4G08310
uniprot id: Q9SUE9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G50430
gene id: 3702:AT1G50430
uniprot id: A0A384L6G7
uniprot id: A8MS34
uniprot id: Q0WU95
uniprot id: Q9LDU6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERG4/ERG24 family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Production of cholesterol by reduction of C7-C8 double bond of 7-dehydrocholesterol (7-DHC). Lesions in the gene coding for the enzyme cause dwarfism.

3702:AT4G08875
gene id: 3702:AT4G08875
uniprot id: A0A178USS8
uniprot id: Q2V3K2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G67510
gene id: 3702:AT1G67510
uniprot id: O64794
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT1G71980
gene id: 3702:AT1G71980
uniprot id: A0A178W9F2
uniprot id: Q8VZ14
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Golgi apparatus membrane
messages: Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) (By similarity).
messages: Membrane
messages: Protein storage vacuole membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G17530
gene id: 3702:AT2G17530
uniprot id: A0A654ETM7
uniprot id: F4INJ2
uniprot id: Q9SHL5
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G36260
gene id: 3702:AT5G36260
uniprot id: Q4V3D2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase A1 family.
messages: Cell membrane
messages: Displays aspartic proteolytic activity (PubMed:27872247). Together with A39, contributes to pollen and ovule development, including the apical cell wall constitution of the growing pollen tubes (PubMed:27872247).
messages: Highly expressed in pollen and pollen tubes (PubMed:27872247). Mostly expressed in roots, flowers and inflorescence, and at lower levels in stems, seedlings and siliques (PubMed:27872247).
messages: In flowers, expressed exclusively in the pollen and growing pollen tubes (PubMed:27872247). During microspore development, confined to tricellular pollen (PubMed:27872247).
messages: Reduced pollen activity and germination rate leading to a decreased male transmission efficiency (PubMed:27872247). The double mutant a36 a39 produces inviable pollen which undergoes apoptosis-like programmed cell death, exhibits a compromised pollen tubes micropylar guidance and has degenerated female gametes (PubMed:27872247). The double mutant a36 a39 accumulates abnormally highly methylesterified homogalacturonans and xyloglucans in the apical pollen tube wall (PubMed:27872247).
messages: cytosol

3702:AT5G09660
gene id: 3702:AT5G09660
uniprot id: A0A178UMW0
uniprot id: A0A1P8BBQ0
uniprot id: A8MRP1
uniprot id: B3H560
uniprot id: F4KDZ4
uniprot id: Q9ZP05
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organelle compartments (Probable). Peroxisomal NAD-dependent malate dehydrogenase involved in fatty acid beta-oxidation. Reoxidizes NADH from the beta-oxidation and provides NAD for the conversion of fatty acyl-CoA to acetyl-CoA. Does not participate directly in the glyoxylate cycle (PubMed:17376163, PubMed:19812894). Required for maintenance of photosynthetic rates under photorespiratory conditions, and carbon flow during photorespiration. Supplies NADH reductant to the peroxisomal hydroxypyruvate reductase (HPR), which reduces hydroxypyruvate into glycerate in the photorespiratory cycle (PubMed:18685043).
messages: Expressed in rosette leaves.
messages: Homodimer.
messages: No visible phenotype under normal growth conditions, but the double mutant plants pmdh1 and pmdh2 show seedling growth arrest 5 days after seed imbibition.
messages: Peroxisome

3702:AT2G32830
gene id: 3702:AT2G32830
uniprot id: A0A5S9X3W9
uniprot id: Q8GYF4
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although related to the sugar transporter family, it does not transport sugars.
messages: Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.
messages: High-affinity transporter for external inorganic phosphate.
messages: Mainly expressed in shoots, First throughout cotyledons and hypocotyls and later restricted to vascular tissues, mostly in phloem. Present in senescing leaves. Also expressed in floral buds and sepals.
messages: Membrane
messages: Slightly induced in roots during phosphate starvation.

3702:AT3G53300
gene id: 3702:AT3G53300
uniprot id: A0A178VKE3
uniprot id: Q9SCN2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT5G37970
gene id: 3702:AT5G37970
uniprot id: Q9FKD0
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the methyltransferase superfamily. Type-7 methyltransferase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.

3702:AT2G29710
gene id: 3702:AT2G29710
uniprot id: O82385
uniprot id: W8PV06
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT2G46710
gene id: 3702:AT2G46710
uniprot id: Q8GYY5
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state. Involved in secondary wall pattern formation. In association with ROPGEF4, mediates local activation of ARAC10/ROP11 to initiate the distinct pattern of secondary cell walls in xylem cells.
messages: Cell membrane
messages: Expressed in differentiating xylem cells.

3702:AT4G33630
gene id: 3702:AT4G33630
uniprot id: Q93YW0
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Down-regulated by H(2)O(2).
messages: Together with EX2, enables higher plants to perceive singlet oxygen as a stress signal in plastid that activates a genetically determined nuclear stress response program which triggers a programmed cell death (PCD). This transfer of singlet oxygen-induced stress-related signals from the plastid to the nucleus that triggers genetically controlled PCD pathway is unique to photosynthetic eukaryotes and operates under mild stress conditions, impeding photosystem II (PSII) without causing photooxidative damage of the plant.
messages: chloroplast

3702:AT5G13370
gene id: 3702:AT5G13370
uniprot id: Q8GZ29
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: Expressed in seedlings, roots, and parts of the siliques.
messages: Expressed widely in young seedling, including roots, shoots, and cotyledons. In older seedlings, present the primary root, shoots, and cotyledons, but not in the root epidermal cells or root hairs. Later observed in the cotyledons and the shoots, but not in the true leaves. In adult plants, accumulates in the primary root and lateral root tips and in the roots near the root/shoot junction. In mature siliques, confined to the tip of the silique in the style just below the stigma and at the base of the silique in the replum and abscission zone of siliques.
messages: Indole-3-acetic acid-amido (IAA) synthetase that catalyzes the conjugation of amino acids to auxin specifically using the auxin precursor indole-3-butyric acid (IBA) and glutamine and, possibly, cysteine as substrates (PubMed:29462792, PubMed:30315112). Displays high catalytic activity with the auxinic phenoxyalkanoic acid herbicides 4-(2,4-dichlorophenoxy)butyric acid (2,4-DB) and to some extent 2,4-dichlorophenoxylacetic acid (2,4-D) as substrates, thus confering resistance to herbicides (PubMed:30315112).
messages: No visible phenotype in normal conditions (PubMed:29462792). Slight reduction in root length when grown on media containing indole-3-butyric acid (IBA) (PubMed:29462792). Hypersensitivity to the auxinic phenoxyalkanoic acid herbicide 4-(2,4-dichlorophenoxy)butyric acid (2,4-DB) (PubMed:30315112).

3702:AT1G66410
gene id: 3702:AT1G66410
uniprot id: P0DH95
uniprot id: P0DH96
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the calmodulin family.
messages: Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
messages: Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Activates MPK8 through direct binding and in an calcium-dependent manner.
messages: Cell membrane
messages: Cytoplasm
messages: Interacts with KCBP. Interacts with MPK8 in an calcium-dependent manner.
messages: Interacts with ZAR1 (via CaMBD domain) (PubMed:27014878). Binds to IQD1 (PubMed:23204523). Binds to MEE62 in a calcium-dependent manner (PubMed:14720124).
messages: This protein has four functional calcium-binding sites.

3702:AT1G52110
gene id: 3702:AT1G52110
uniprot id: F4IBA0
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT1G52910
gene id: 3702:AT1G52910
uniprot id: A0A178W7B3
uniprot id: Q9C930
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Membrane

3702:AT2G23300
gene id: 3702:AT2G23300
uniprot id: O22178
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G29870
gene id: 3702:AT4G29870
uniprot id: A0A178UUN9
uniprot id: Q9SZQ8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OSTC family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G60600
gene id: 3702:AT1G60600
uniprot id: Q0WUA3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MenA family. Type 2 subfamily.
messages: Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4-naphthoquinone.
messages: Slower growth and dwarfism. Albino phenotype in aging leaves. Decreased number of chloroplasts, but normal lamellar structure retained. Absence of phylloquinone and 97% decrease in the content of plastoquinone.
messages: chloroplast membrane

3702:AT3G02980
gene id: 3702:AT3G02980
uniprot id: Q9M8T9
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the acetyltransferase family.
messages: Histone acetyltransferase that probably regulates acetylation status of histone H3 during meiosis. Histone acetylation may influence recombination and chromosome segregation.
messages: The gain-of-function mutant mcc1 (T-DNA tagging) has elongated rosette leaves, increased stem length elongation, early flowering and reduced fertility and seed number due to defects in meiosis.

3702:AT1G63940
gene id: 3702:AT1G63940
uniprot id: P92947
names: Activity Regulation
names: Biotechnology
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FAD-dependent oxidoreductase family.
messages: Catalyzes the conversion of monodehydroascorbate (MDA) to ascorbate, oxidizing NADH in the process. Can also use 2,4,6-trinitrotoluene (TNT) and 1-chloro-2,4-dinitrobenzene (CDNB) as substrates, but not 1-chloro-4-nitrobenzene (CNB).
messages: Interacts in vitro with TRXy.
messages: Mitochondrion
messages: No visible phenotype, but enhanced 2,4,6-trinitrotoluene (TNT) tolerance.
messages: Redox regulation of the activity by thioredoxin TRXy1.
messages: The main mechanism for TNT toxicity in plants is the production of superoxide in the mitochondria by MDAR5 with TNT as a substrate. Inactivation of MDAR5 enhance TNT tolerance, thus enabling revegetation and remediation of explosives-contaminated sites.
messages: The use of alternative transcription starts causes dual targeting of the same mature MDAR protein to both mitochondria and chloroplast.
messages: chloroplast

3702:AT4G22940
gene id: 3702:AT4G22940
uniprot id: F4JMQ0
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT3G57160
gene id: 3702:AT3G57160
uniprot id: Q8LCL8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CYSTM1 family.
messages: Membrane

3702:AT3G19180
gene id: 3702:AT3G19180
uniprot id: Q8VY16
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the plastid division machinery required for PDV1 localization to constriction sites. Involved in chloroplast division site placement (PubMed:28984364, PubMed:23936263). Required for the proper formation of FtsZ rings at the division site in nongreen plastids (e.g. etioplasts) (PubMed:23936263). Inhibits FtsZ assembly, functioning as an antagonistic regulator of FtsZ dynamics against ARC6, by recruiting ARC3 to the middle of the plastid to facilitates its interaction with FtsZ proteins (PubMed:26527658, PubMed:30824505). Required during stromule biogenesis in the leaf epidermis, especially in non-mesophyll cells plastids (PubMed:28984364).
messages: Defects of chloroplast and FtsZ filament morphology (e.g. long FtsZ filaments formed by multiple rings or spirals); elongated chloroplasts with multiple division sites (PubMed:19453460, PubMed:19564892, PubMed:23936263). Aberrant stromule biogenesis in the leaf epidermis associated with giant and pleomorphic amoeboid chloroplasts, typically having one or more constrictions as well as one or more extremely long stromules (PubMed:28984364). Reduced number of enlarged etioplasts in cotyledons associated with the formation of multiple FtsZ-rings (PubMed:23936263).
messages: Exclusively expressed in young green tissues such as young cotyledons, shoot apex, emerging leaves and budding inflorescence.
messages: Self-interacts (PubMed:19564892, PubMed:28984364). Interacts (via N-terminus) with ARC3 (via MORN domains) (PubMed:19453460, PubMed:19564892, PubMed:26527658). Binds (via N-terminus) to FTSZ2 proteins, FTSZ2-1 and FTSZ2-2 (PubMed:26527658, PubMed:28984364, PubMed:30824505). Recruited ARC3 to the middle of the plastid where subsequent complex made of CDP1/PARC6, ARC3 and FtsZ proteins can form; this complex enhances the dynamics of Z rings during chloroplast division (PubMed:30824505). Interacts (via C-terminus) with PDV1 (via C-terminus) (PubMed:26527658). Interacts with MIND1 (PubMed:28984364).
messages: chloroplast inner membrane

3702:AT4G08840
gene id: 3702:AT4G08840
uniprot id: Q9LDW3
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT1G66920
gene id: 3702:AT1G66920
uniprot id: A0A178WKZ8
uniprot id: F4HQ22
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38680
gene id: 3702:AT2G38680
uniprot id: F4ITW1
names: Similarity
messages: Belongs to the pyrimidine 5'-nucleotidase family.

3702:AT5G59740
gene id: 3702:AT5G59740
uniprot id: A0A178U9N4
uniprot id: Q6NMB6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleotide-sugar transporter family. UDP-galactose:UMP antiporter (TC 2.A.7.11) subfamily.
messages: Membrane
messages: Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

3702:AT1G05010
gene id: 3702:AT1G05010
uniprot id: A0A178WHU2
uniprot id: Q06588
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Enzyme involved in the ethylene biosynthesis. May promote stem elongation by maximizing the extensibility cells, possibly by activating ethylene biosynthesis, in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0).
messages: Expressed in vegetative tissues. Expressed constitutively at a low level in leaves and blades.
messages: Strongly induced by wounding, ethrel, iron, ethylene and 1-amino-cyclopropane-carboxylic acid (ACC). Accumulates in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0).

3702:AT5G23440
gene id: 3702:AT5G23440
uniprot id: A0A178U6Q9
uniprot id: Q9FHL4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ferredoxin thioredoxin reductase alpha subunit family.
messages: Heterodimer of subunit A (variable subunit) and subunit B (catalytic subunit). Heterodimeric FTR forms a complex with ferredoxin and thioredoxin.
messages: Subtle developmental changes including slow development of young seedlings, an increased sensitivity to fluctuating culture conditions, and slightly delayed flowering time (PubMed:16328792). High light induces rapidly chlorosis in leaves (PubMed:16328792).
messages: Variable subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
messages: chloroplast

3702:AT5G42900
gene id: 3702:AT5G42900
uniprot id: A0A178UCU0
uniprot id: Q8L8T7
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Nucleus
messages: Period lengthening of various circadian output rhythms and affected central clock gene expression (PubMed:27837007). Derepressed expression of circadian-regulated and cold-responsive genes (PubMed:27990760). Delayed flowering under long days conditions, and slightly in short days (PubMed:27837007). Increased freezing tolerance (PubMed:27837007).
messages: Regulated by the circadian clock at warm growth temperatures as direct targets of CCA1, with highest levels from noon to dusk (PubMed:19566593, PubMed:27837007, PubMed:27990760). Repressed by CCA1 at the transcription level via chromatin binding and in a temperature-dependent way (PubMed:27837007, PubMed:19566593, PubMed:27990760). 6 hours after inoculation with the yellow strain of cucumber mosaic virus [CMV(Y)], strongly induced in resistant cultivars (cv. C24) but repressed in sensitive cultivars (cv. Columbia) (PubMed:15111722). Strongly induced by abscisic acid (ABA) (PubMed:17304219). Rapidly induced by cold, but in a circadian rythm-dependent manner and regulated by CCA1 (PubMed:19566593, PubMed:27837007). Transcription is repressed by blue and red lights, but induced by darkness; by contrast, present at low levels in darkness but accumulates in blue light (at protein level) due to transcription auto-repression (PubMed:27837007).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Together with COR28, involved in central circadian clock regulation and in flowering promotion, by binding to the chromatin of clock-associated evening genes TOC1, PRR5, ELF4 and cold-responsive genes in order to repress their transcription (PubMed:27837007, PubMed:27990760). Negative regulator of freezing tolerance (PubMed:27837007).

3702:AT3G49340
gene id: 3702:AT3G49340
uniprot id: A0A7G2ESN7
uniprot id: Q9SG15
names: Similarity
messages: Belongs to the peptidase C1 family.

3702:AT3G03750
gene id: 3702:AT3G03750
uniprot id: Q9SRV2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily.
messages: Chromosome
messages: Histone methyltransferase.
messages: In the pre-SET domain, Cys residues bind 3 zinc ions that are arranged in a triangular cluster; some of these Cys residues contribute to the binding of two zinc ions within the cluster.
messages: Nucleus

3702:AT5G02270
gene id: 3702:AT5G02270
uniprot id: Q9LZ98
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCI family.
messages: By sucrose.
messages: Cytoplasm

3702:AT1G73400
gene id: 3702:AT1G73400
uniprot id: Q9FX35
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT4G04340
gene id: 3702:AT4G04340
uniprot id: Q9XEA1
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by mechanical pressure.
messages: Acts as a hyperosmolarity-gated non-selective cation channel that permeates Ca(2+) ions (PubMed:25162526, PubMed:30190597). Shows the following permeability sequence: K(+) > Ba(2+) = Ca(2+) > Na(+) = Mg(2+) = Cs(+) (PubMed:25162526). Mechanosensitive ion channel that converts mechanical stimuli into a flow of ions (PubMed:30190597).
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Cell membrane
messages: Expressed in leaves, flowers, roots and guard cells.
messages: Homodimer.
messages: Impaired osmotic Ca(2+) signaling in guard cells and root cells, and attenuated water transpiration regulation and root growth in response to osmotic stress.

3702:AT5G63135
gene id: 3702:AT5G63135
uniprot id: A0A178UEH7
uniprot id: Q8LC33
names: Similarity
messages: Belongs to the APC15 family.

3702:AT5G37540
gene id: 3702:AT5G37540
uniprot id: A0A5S9Y9A8
uniprot id: Q9FGI3
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT2G39445
gene id: 3702:AT2G39445
uniprot id: A0A178VX89
uniprot id: A0A384L1W7
uniprot id: A0A384LLP6
uniprot id: B3H5S3
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G23395
gene id: 3702:AT5G23395
uniprot id: Q8GYJ4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Mitochondrion intermembrane space
messages: No visible phenotype under normal growth conditions.
messages: Peroxisome matrix
messages: Required for the import and folding of small cysteine-containing proteins in the mitochondrial intermembrane space (Probable). Involved in the mitochondrial oxidative folding of the copper-zinc superoxide dismutase CSD1, the copper chaperone for superoxide dismutase CCS, and subunits of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I). Involved in the peroxisomal oxidative folding of the copper-zinc superoxide dismutase CSD3, and the fatty acid beta-oxidation multifunctional protein AIM1 (PubMed:20829360).

3702:AT3G63370
gene id: 3702:AT3G63370
uniprot id: Q9M1V3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Involved in RNA editing event in chloroplasts. Required for the editing of a single site in rps14 transcript.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT1G22700
gene id: 3702:AT1G22700
uniprot id: B9DHG0
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Induced by light.
messages: Interacts with PSA3.
messages: Nuclear genome-encoded factor required for the accumulation of photosystem I (PSI). Functions as PSI biogenesis factor (PubMed:16679416, PubMed:28522455). Cooperates with PSA3 to promote the stable assembly of PSI in the thylakoid membrane. May target primarily the PsaC subunit (PubMed:28522455).
messages: Seedling lethality when homozygous. Dwarf and pale yellowish phenotype when grown on MS medium supplemented with 2% sucrose.
messages: chloroplast thylakoid membrane

3702:AT5G60210
gene id: 3702:AT5G60210
uniprot id: A0A1P8BH66
uniprot id: A0A654GDS7
uniprot id: Q9LSS5
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as a scaffold, mediating interaction of ROPs with different proteins.
messages: Belongs to the ICR family.
messages: Expressed in flowers.
messages: Interacts with ARAC11 in vitro.

3702:AT5G46400
gene id: 3702:AT5G46400
uniprot id: F4KHG8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRP39 family.
messages: Involved in pre-mRNA splicing.
messages: Nucleus

3702:AT3G11700
gene id: 3702:AT3G11700
uniprot id: A0A178VEM3
uniprot id: Q93W32
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: May be a cell surface adhesion protein.
messages: Secreted

3702:AT5G18030
gene id: 3702:AT5G18030
uniprot id: A0A178UFM7
uniprot id: Q9FJF9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: Functions as positive effectors of cell expansion through modulation of auxin transport.
messages: Strongly induced by auxin.

3702:AT2G01755
gene id: 3702:AT2G01755
uniprot id: A0A178W0C2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G06530
gene id: 3702:AT3G06530
uniprot id: A0A1I9LP28
uniprot id: A0A1I9LP29
uniprot id: F4JAY0
uniprot id: F4JAY1
uniprot id: Q9C8Z4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HEATR1/UTP10 family.
messages: Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity).
messages: nucleolus

3702:AT3G07040
gene id: 3702:AT3G07040
uniprot id: Q39214
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the disease resistance NB-LRR family.
messages: Cell membrane
messages: Disease resistance (R) protein that specifically recognizes the AvrRpm1 type III effector avirulence protein from Pseudomonas syringae (PubMed:9861059). Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein (PubMed:9861059). That triggers a defense system including the hypersensitive response (HR), which restricts the pathogen growth (PubMed:9861059). Acts via its interaction with RIN4, and probably triggers the plant resistance when RIN4 is phosphorylated by AvrRpm1. It is then degraded at the onset of the hypersensitive response (PubMed:9861059).
messages: Endomembrane system
messages: Interacts directly with RIN4 via its N-terminal region. Interacts (via N-terminus) with RIN2 and RIN3 (via C-terminus). Interacts with TIP49A, a protein known to interact with the TATA binding protein complex (TBP) (PubMed:11955429, PubMed:12062092, PubMed:16212605). Binds to MORC1/CRT1 (PubMed:20332379). Interacts, via its NB-ARC domain, with RIN13 (PubMed:15722472).
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT4G17710
gene id: 3702:AT4G17710
uniprot id: Q8L7H4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Expressed in flowers.
messages: Nucleus
messages: Probable transcription factor.

3702:AT3G06510
gene id: 3702:AT3G06510
uniprot id: A0A178VES5
uniprot id: Q93Y07
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Expressed in hypocotyls, cotyledons, stems, leaves, pedicels, sepals, anthers and pistils. Limited expression in roots. Not detected in petals or filaments.
messages: Glycosyl hydrolase family protein acting primarily as a highly specific galactosyltransferase (PubMed:25100720). Synthesizes digalactosyldiacylglycerol from monogalactosyldiacylglycerol in the absence of UDP-galactose in vitro (PubMed:14600212). Hydrolyzes o- and p-nitrophenyl beta-D-glucoside in vitro (PubMed:15258268). Plays a role in freezing tolerance (PubMed:15258268, PubMed:18466306, PubMed:20798281). May play a role in chloroplast protection (PubMed:18466306).
messages: Induced by MgCl(2).
messages: Not induced by cold, dehydration, salt or abscisic acid.
messages: Sensitive to freezing (PubMed:15258268, PubMed:20798281). Loss of tri- and tetragalactosyldiacylglycerol accumulation during freezing (PubMed:20798281).
messages: chloroplast
messages: chloroplast outer membrane

3702:AT4G15248
gene id: 3702:AT4G15248
uniprot id: Q1G3I2
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Circadian-regulation. Peak of expression toward the end of the dark period in both long day and short day photoperiods.
messages: Developmental regulator acting by forming heterodimeric complexes, that sequester CO and CO-like (COL) proteins into non-functional complexes. Engages CO and the transcriptional repressor TPL in a tripartite complex. Involved in the CO-mediated long-day flowering-promotion pathway.
messages: Highly expressed in shoot apical meristems and in vascular tissues of leaves. Also detected in petioles.
messages: Interacts with CO (via B-box) and with TPL (via PFVFL motif).
messages: Nucleus
messages: The PFVFL motif is required for interaction with TPL.

3702:AT3G51895
gene id: 3702:AT3G51895
uniprot id: A0A1I9LNF9
uniprot id: Q9SV13
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: By nitrogen starvation, but not by sulfate starvation.
messages: Expressed only in leaves.
messages: H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
messages: Membrane

3702:AT1G64690
gene id: 3702:AT1G64690
uniprot id: F4I878
names: Disruption Phenotype
names: Function
names: Subunit
messages: Acts as a key regulator of trichome branching. Could participate with STI in the same pathway. Also plays a role in integrating endoreplication levels with cell shape.
messages: Interacts with STI.
messages: Shows trichomes with no branching.

3702:AT5G60410
gene id: 3702:AT5G60410
uniprot id: A0A654GD76
uniprot id: A0A7G2FHN3
uniprot id: A0A7G2FNS4
uniprot id: Q680Q4
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autosumoylated at Lys-100 and Lys-488.
messages: Belongs to the PIAS family.
messages: Dwarf phenotype. Heat-sensitive phenotype. Early flowering under short day. Elevated level of salicylic acid (SA), increased expression of pathogenesis-related (PR) genes and increased resistance to the bacterial pathogen P.syringae. ABA hypersensitivity during seed germination primary root growth. Exaggerated prototypical Pi-starvation responses, including increased root-shoot mass ratio and greater anthocyanin accumulation (PubMed:15894620).
messages: E3 SUMO protein ligase involved in regulation processes. Mediates SUMO/ attachment to PHR1, a MYB transcriptional activator controlling the phosphate deficiency responses (PubMed:15894620). Functions as an upstream negative regulator of salicylic acid (SA) accumulation and subsequent SA-mediated systemic acquired resistance (SAR) signaling. Probably not involved in jasmonic acid (JA)-mediated defense response. Participates in abiotic stress-induced sumoylation. Controls heat shock-induced SUMO1 and SUMO2 conjugation and facilitates basal thermotolerance. Involved in freezing tolerance by mediating sumoylation of ICE1, a transcription activator of the cold signaling regulator CBF3/DREB1A. Acts as positive regulator of drought stress tolerance. Acts as floral repressor that promotes FLC expression by repressing FLD activity through sumoylation. Acts as negative regulator of abscisic acid (ABA) signaling through ABI5 sumoylation. Mediates sumoylation of SCE1, GTE3 and GTE5. Functions as negative regulator of SnRK1 signaling through sumoylation of several components of the SnRK1 complex (PubMed:26662259).
messages: Interacts (via PHD domain) with SCE1, GTE3 and GTE5.
messages: Nucleus speckle
messages: The PHD-type zinc finger mediates interaction with SCE1, GTE3 and GTE5 and is required for E3 activity.
messages: Ubiquitous.

3702:AT1G01200
gene id: 3702:AT1G01200
uniprot id: Q9LNK1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Endosome membrane
messages: Expressed in root tips.
messages: Intracellular vesicle trafficking and protein transport.
messages: trans-Golgi network membrane

3702:AT2G47280
gene id: 3702:AT2G47280
uniprot id: Q4PSQ5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: cell wall

3702:AT1G78955
gene id: 3702:AT1G78955
uniprot id: A0A178WKN4
uniprot id: A0A1P8ARV5
uniprot id: A0A1P8ARV6
uniprot id: A0A1P8ARW8
uniprot id: A0A384L012
uniprot id: P0C8Y0
names: Caution
names: Function
names: Similarity
messages: Belongs to the terpene cyclase/mutase family.
messages: Converts oxidosqualene to camelliol C. Minor production of achilleol and beta-amyrin.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G32690
gene id: 3702:AT4G32690
uniprot id: A0A178V2G3
uniprot id: Q67XG0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the truncated hemoglobin family. Group II subfamily.
messages: Binds 1 heme group per subunit.
messages: Expressed ubiquitously, with higher levels in root tissue than in shoot tissue.
messages: Hemoglobin-like protein that exhibits an unusual concentration-independent binding of O(2) and CO. May promote shoot organogenesis from root explants in vitro (PubMed:11526234, PubMed:21741261). Inhibits RGLG3 and RGLG4 ubiquitination activity (PubMed:27497447).
messages: Homodimer when ferric (Probable). Interacts with RGLG3 and RGLG4 (PubMed:27497447).
messages: Slight reduction of the number of shoots produced by root explants in vitro; root explants are first cultured on an initial auxin-rich callus induction medium (CIM) followed by a transfer onto a cytokinin-containing shoot induction medium (SIM).

3702:AT1G26450
gene id: 3702:AT1G26450
uniprot id: Q9FZD0
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in the sieve elements.
messages: Regulated by the transcription factors NAC045 and NAC086.

3702:AT5G06130
gene id: 3702:AT5G06130
uniprot id: A0A178UJC5
uniprot id: Q8VYD8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the orange-like family.
messages: Interacts with PSY1.
messages: May be associated with accumulation of carotenoids in chromoplasts.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast membrane

3702:AT1G03445
gene id: 3702:AT1G03445
uniprot id: A0A178WIX8
uniprot id: A0A1P8AQ82
uniprot id: Q9LR78
names: Activity Regulation
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by phosphorylation at Ser-764 by CDG1.
messages: Belongs to the PPP phosphatase family. BSU subfamily.
messages: Binds 2 manganese ions per subunit.
messages: Interacts with CDG1, CDL1 and ASK7/BIN2.
messages: Mainly expressed in young, elongating tissues. In young seedlings, it is expressed at the base of the hypocotyl, at the tip and most peripheral cell layers of cotyledons, and in the vascular cylinder of roots, particularly in the elongation zone and at the point of emergence of lateral roots. In mature plants, it is still present in the root vasculature, but almost completely absent in fully expanded stems and leaves. In flowers, it is mainly expressed in sepal veins, anther filaments, and in the style, suggesting that BSU1 is expressed in actively growing regions and apparently enriched in vascular tissues.
messages: Nucleus
messages: Phosphatase that acts as a positive regulator of brassinosteroid (BR) signaling (PubMed:14977918, PubMed:21855796). Dephosphorylates BES1, a transcription factor that regulates the expression of BR-response genes, thereby playing an important role in the regulation of response to BRs (PubMed:14977918). Inactivates the negative regulator of BR signaling ASK7/BIN2 by dephosphorylation at 'Tyr-200' (PubMed:21855796).
messages: Phosphorylated at Ser-395 and Ser-444. Phosphorylated at Ser-764 by CDG1 and CDL1.

3702:AT5G28730
gene id: 3702:AT5G28730
uniprot id: F4KA06
names: Similarity
messages: Belongs to the HARBI1 family.

3702:AT1G09245
gene id: 3702:AT1G09245
uniprot id: Q8GX02
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G13345
gene id: 3702:AT4G13345
uniprot id: A0A1P8B544
uniprot id: A0A1P8B546
uniprot id: A0A1P8B559
uniprot id: F4JT04
uniprot id: Q93YS8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TDE1 family.
messages: Membrane

3702:AT3G06230
gene id: 3702:AT3G06230
uniprot id: Q9M8J5
names: PTM
names: Similarity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily.
messages: Phosphorylation at Ser-195 and Ser-201 by MAP kinase kinase kinases positively regulates kinase activity.

3702:AT2G04560
gene id: 3702:AT2G04560
uniprot id: F4IF99
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LpxB family.
messages: Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses (Potential).
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions, but plants lacking LPXB accumulate high levels of 2,3-diacylglucosamine-1-phosphate and UDP-2,3-diacylglucosamine.

3702:AT3G61900
gene id: 3702:AT3G61900
uniprot id: Q9M275
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT1G06310
gene id: 3702:AT1G06310
uniprot id: A0A654E9A3
uniprot id: Q9LMI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acyl-CoA oxidase family.
messages: Catalyzes the desaturation of acyl-CoAs to 2-trans-enoyl-CoAs.
messages: Peroxisome

3702:AT2G28520
gene id: 3702:AT2G28520
uniprot id: Q8RWZ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase 116 kDa subunit family.
messages: Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. Required during cell expansion.
messages: Lethal.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: Vacuole membrane
messages: trans-Golgi network membrane

3702:AT3G06400
gene id: 3702:AT3G06400
uniprot id: A0A178VF59
uniprot id: A0A178VGV3
uniprot id: F4JAV9
uniprot id: Q8RWY3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
messages: Highly expressed in growing tissues such as inflorescence and flower meristems, young leaves and floral organs. Expressed in roots, rosette and cauline leaves, stems, flowers, inflorescences and siliques.
messages: In developing ovule, expressed in all cells of the young nucellus, including the functional megaspore. After the initiation of megagametogenesis, expressed in most cells of the ovule, including the integuments, the developing megagametophyte, and the funiculus. In mature ovules, strongly expressed in the cellularized megagametophyte. After double fertilization, expressed in the developing embryo and the free nuclear endosperm until seed maturity. Expressed in developing male gametophytes and mature pollen grains.
messages: Interacts with RLT1 and RLT2 (PubMed:22694359). Interacts (via C-terminus) with RLT1 (via the DDT domain), RLT2 (via the DDT domain), PTM (via the DDT domain) and DDR4 (via the DDT domain) (PubMed:23691993). Binds to FGT1 (PubMed:27680998).
messages: Nucleus
messages: Plants silencing CHR11 display reduced plant height and small cotyledonary embryos with limited cell expansion. Plants silencing CHR11 specifically at the onset of female gametogenesis (megagametogenesis) have defective female gametophytes arrested before the completion of the mitotic haploid nuclear divisions.
messages: Possesses intrinsic ATP-dependent nucleosome-remodeling activity. Constitutes the catalytic subunit of several complexes capable of forming ordered nucleosome arrays on chromatin (By similarity). Involved in the formation of nucleosome distribution patterns (PubMed:24606212). Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte (PubMed:16286646). Required for the maintenance of the plant vegetative phase. In association with RLT1 or RLT2 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC (PubMed:22694359). Necessary to acquire heat stress (HS) memory (PubMed:27680998).
messages: Reduced heat stress (HS) memory. Premature decline of expression of HSA32, HSP18.2, HSP21, HSP22 and HSP101 after HS in the double mutant plants chr11-1 and chr17-1 (PubMed:27680998). No visible phenotype under normal growth conditions, but the double mutant plants chr11-1 and chr17-1 are very small and display early flowering and sterility (PubMed:22694359).

3702:AT4G24120
gene id: 3702:AT4G24120
uniprot id: A0A178V2Q5
uniprot id: Q6R3L0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the YSL (TC 2.A.67.2) family.
messages: Highly expressed during leaf senescence.
messages: Involved in iron loading of the seeds. Acts probably as a transporter of iron- and metal-nicotianamine chelates.
messages: Low levels of expression in leaves and shoots, but not detected in roots. Restricted to the vasculature, in the xylem parenchyma surrounding xylem tubes. Expressed in pollen grains, in the vasculature of petals and sepals, in the carpel veins, in the style underneath the stigmatic papillae, in the vascular tissue of the funiculus and in the chalazal endosperm.
messages: Membrane
messages: Plants do not show visible phenotype, but a decreased iron and nicotianamine content in seeds resulting in a transient defect in germination.
messages: Slight induction by manganese, copper or zinc deficiency. Inhibited upon iron deficiency and induced by iron overload.

3702:AT4G18050
gene id: 3702:AT4G18050
uniprot id: A0A1P8B3X8
uniprot id: A0A654FQK4
uniprot id: Q9M0M2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT5G16450
gene id: 3702:AT5G16450
uniprot id: A0A384KR22
uniprot id: B9DH14
uniprot id: Q9FFE0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class II aldolase/RraA-like family.
messages: Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity).
messages: Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
messages: Divalent metal cation.
messages: Homotrimer.

3702:AT1G22510
gene id: 3702:AT1G22510
uniprot id: F4I1E4
uniprot id: Q0WWX8
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G07760
gene id: 3702:AT5G07760
uniprot id: A0A1P8BDL7
uniprot id: P0C5K5
names: Similarity
messages: Belongs to the formin-like family.
messages: Belongs to the formin-like family. Class-II subfamily.

3702:AT3G53760
gene id: 3702:AT3G53760
uniprot id: A0A178V4Y7
uniprot id: A0A1I9LLT7
uniprot id: A0A1I9LLT8
uniprot id: Q9M350
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TUBGCP family.
messages: Gamma-tubulin complex is composed of gamma-tubulin and GCP proteins.
messages: Gamma-tubulin complex is essential for the control of microtubular network remodeling in the course of initiation and development of giant-feeding cells, and for the successful reproduction of nematodes (e.g. Meloidogyne spp.) in their plant hosts (By similarity).
messages: Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.
messages: Gamma-tubulin complex is necessary for microtubule nucleation at the microtubule organizing centers (MTOCs).
messages: Up-regulated in galls upon nematode infection.
messages: microtubule organizing center
messages: spindle

3702:AT5G42340
gene id: 3702:AT5G42340
uniprot id: Q681N2
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G35680
gene id: 3702:AT1G35680
uniprot id: P51412
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to 23S ribosomal RNA in the presence of protein L20.
messages: chloroplast

3702:AT5G03290
gene id: 3702:AT5G03290
uniprot id: Q945K7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: Heterooligomer of catalytic and regulatory subunits.
messages: Mitochondrion
messages: Performs an essential role in the oxidative function of the citric acid cycle.
messages: Ubiquitous.

3702:AT3G09930
gene id: 3702:AT3G09930
uniprot id: A0A654F5L9
uniprot id: Q9SF94
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT1G65320
gene id: 3702:AT1G65320
uniprot id: Q8GZA4
names: Subcellular Location Annotation
messages: Vacuole membrane

3702:AT1G44090
gene id: 3702:AT1G44090
uniprot id: A0A178WC38
uniprot id: Q4PT02
names: Caution
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA20OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in 3-day-old seedlings and siliques. Detected in dry seeds, roots, old leaves and inflorescences.
messages: Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton.
messages: Not controlled by the level of physiologically active gibberellin.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G43720
gene id: 3702:AT3G43720
uniprot id: Q9LZH5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in seeds after imbibition (PubMed:23893219). Mainly present in elongating or expanding tissues (PubMed:21558309). Strongly expressed in the aerial portions and root tips of seedlings. Present in stem and leaf epidermis, including the trichomes, leaf mesophyll cells, and stem cortex and xylem. In flowers, observed in the upper portion of the styles, anther filament, and veins of the sepals and petals, silique walls and developing seeds (PubMed:23893219).
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Lipid transfer protein that, together with LTPG1, binds to lipids and functions as a component of the cuticular lipid export machinery that performs extensive export of intracellular lipids (e.g. C29 alkane) from epidermal cells to the surface to build the cuticular wax layer and silique walls (PubMed:22891199). Contributes to pre-invasive defense against some non-host powdery mildew pathogens by preventing the penetration of the epidermal cell wall by the fungal agents (e.g. Blumeria graminis f. sp. hordei (Bgh)) (PubMed:30102837). Involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition (PubMed:24460633).
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Reduced cuticular wax load on the stem surface and in silique walls, with altered cuticular lipid composition (especially C29 alkane) associated with diffuse cuticular layer structure (PubMed:22891199). Increased susceptibility to penetration of the epidermal cell wall by the non-host mildew fungal agent Blumeria graminis f. sp. hordei (Bgh) (PubMed:30102837). Some early aborted seeds and infertile ovules, and increased salt permeability in seeds (PubMed:24460633).
messages: Up-regulated in the epidermis of top stems. Expressed in roots, cotyledons, seedlings, leaves, stems, buds, flower and silique walls (PubMed:23893219). Preferentially expressed in the shoot apical meristem and the root meristem (PubMed:21558309). Also detected in expanding leaves and petals, developing flowers, and elongating pistils, stamens and siliques (PubMed:21558309).

3702:AT2G27040
gene id: 3702:AT2G27040
uniprot id: Q9ZVD5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the argonaute family. Ago subfamily.
messages: Cajal body
messages: Decreased DNA cytosine methylation at CpNpG and asymmetric positions at different DNA loci corresponding to retroelements, transposons and repetitive DNA sequences (PubMed:12522258, PubMed:17993621, PubMed:21738482). Reduced H3K9me2 at IGN5 and IGN26 loci (PubMed:21738482).
messages: Expressed in embryos, mature leaves, vascular tissue of the sepals, stamens and stigma, at the tip of the style and siliques.
messages: Interacts with NRPE1 (via C-terminus). Binding to NRPE1 is required for its function in RdDM. Interacts with turnip crinkle virus (TCV) capsid protein P38; this interaction inhibits probably RNA silencing ability of AGO4. Interacts with SDE3 (PubMed:16839879, PubMed:17938239, PubMed:19377477, PubMed:20439431, PubMed:22940249). Binds to RDM3 (PubMed:19410546, PubMed:19343051). Binds chromatin at loci subject to transcriptional silencing (PubMed:21738482). Interacts with MBD6 (PubMed:28229965).
messages: Together with RDM3, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci (PubMed:21738482). Component of the RISC complex that associate with the small interfering RNA (siRNA) pathway involved in direct cytosine methylation at endogenous DNA repeats. Forms a AGO4/NRPE1/siRNA complex in cajal body, facilitating its function in RNA-directed gene silencing of target loci. Required for CpNpG and asymmetric DNA methylation as well as histone H3 'Lys-9' methylation (H3K9me) at SUP and SN1 loci. May be not required for CpG methylation. Required for the production and maintenance of retrotransposon SN1 and Copia and ribosomal 5S 25 nucleotide siRNAs specialized in gene silencing at chromatin level. Involved in de novo methylation of FWA gene and required for the maintenance of RNA-directed DNA methylation (RdDM) triggered by inverted repeat transgenes. Interacts with miRNA miR390 and miR172, targeting respectively TAS3 and AP2 mRNAs, and mediates cleavage of miRNA targets. Associates mainly with small RNAs of 24 nucleotide in length and preferentially recruits small RNAs with a 5' terminal adenosine. Targeted by the turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO4 function in RNA silencing. Required for resistance to the bacterial pathogen P.syringae. Works independently of the RdDM pathway in mediating resistance to P.syringae. RdDM is involved in viral genome methylation as an epigenetic defense against geminiviruses (PubMed:12522258, PubMed:14988555, PubMed:15242620, PubMed:16839878, PubMed:16839879, PubMed:16998468, PubMed:17869110, PubMed:17938239, PubMed:17993621, PubMed:18342361, PubMed:18596098, PubMed:19377477, PubMed:20173091).
messages: nucleolus
messages: nucleoplasm

3702:AT3G06220
gene id: 3702:AT3G06220
uniprot id: Q1PES7
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G27480
gene id: 3702:AT2G27480
uniprot id: Q9ZQH1
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.5, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT1G48310
gene id: 3702:AT1G48310
uniprot id: A0A178W6Q2
uniprot id: A0A178W7P0
uniprot id: A0A1P8AQE4
uniprot id: A0A1P8AQF7
uniprot id: A0A384KCX3
uniprot id: A0A7G2DW50
uniprot id: F4HWU9
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G51200
gene id: 3702:AT1G51200
uniprot id: A0A178W307
uniprot id: Q8H0X0
names: Caution
names: Function
messages: May be involved in environmental stress response.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G15440
gene id: 3702:AT2G15440
uniprot id: A0A178VWF3
uniprot id: Q9SJN8
names: Subcellular Location Annotation
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G23760
gene id: 3702:AT2G23760
uniprot id: A0A1P8AZ70
uniprot id: A0A5S9X0S1
uniprot id: Q94KL5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/BELL homeobox family.
messages: Expressed in lateral organs.
messages: May form heterodimeric complexes with TALE/KNOX proteins (By similarity). Interacts with OFP1, OFP2 and OFP5 (PubMed:15781858). Interacts with KNATM, isoform KNATM-B (PubMed:18398054).
messages: Nucleus
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.
messages: Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.

3702:AT4G20440
gene id: 3702:AT4G20440
uniprot id: A0A384KCA8
uniprot id: Q9SUN5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP SmB/SmN family.
messages: Nucleus

3702:AT3G16440
gene id: 3702:AT3G16440
uniprot id: A0A1I9LLA7
uniprot id: O04312
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the jacalin lectin family.
messages: Defects in female gametophyte development. Arrested during endosperm development.
messages: Involved in gametophytic development.

3702:AT4G10680
gene id: 3702:AT4G10680
uniprot id: O82494
names: Similarity
messages: Belongs to the TFIIB family.

3702:ArthCp051
gene id: 3702:ArthCp051
uniprot id: P62113
uniprot id: Q7HIW7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbN family.
messages: May play a role in photosystem I and II biogenesis.
messages: Membrane
messages: Originally thought to be a component of PSII; based on experiments in Synechocystis, N.tabacum and barley, and its absence from PSII in T.elongatus and T.vulcanus, this is probably not true.
messages: chloroplast thylakoid membrane

3702:AT5G36110
gene id: 3702:AT5G36110
uniprot id: Q9LVY7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: Possesses triterpene oxidizing activity. Catalyzes the C28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Catalyzes the C28 carboxylation of alpha- and beta-amyrin.

3702:AT1G28550
gene id: 3702:AT1G28550
uniprot id: Q9S810
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT2G03410
gene id: 3702:AT2G03410
uniprot id: Q9ZQ77
names: Similarity
messages: Belongs to the Mo25 family.

3702:AT1G27360
gene id: 3702:AT1G27360
uniprot id: A0A178WBN1
uniprot id: Q9FZK0
names: Caution
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed constitutively during plant development, weak increase during flowering.
messages: Negatively regulated by microRNAs miR156 and miR157.
messages: Nucleus
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

3702:AT4G37530
gene id: 3702:AT4G37530
uniprot id: A0A7G2F6L9
uniprot id: A8MRF4
uniprot id: Q9SZE7
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT5G39630
gene id: 3702:AT5G39630
uniprot id: A0A654G6K4
uniprot id: Q1PDQ2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the VTI1 family.
messages: Membrane

3702:AT4G16440
gene id: 3702:AT4G16440
uniprot id: A0A178V110
uniprot id: Q94CL6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NARF family.
messages: Coordinates probably two (Fe-S) clusters with different magnetic properties (PubMed:18329103). Knockdown mutants have a dwarf phenotype, but are indistinguishable from wild type under hypoxic conditions (PubMed:18329103, PubMed:23639116).
messages: Cytoplasm
messages: Embryonic lethality when homozygous (PubMed:23104832, PubMed:23734982, PubMed:23639116).
messages: Essential component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery (PubMed:23104832). Required for the maturation of extramitochondrial Fe/S proteins (By similarity). Required for expression of the imprinted FWA gene, for seed development and is involved in the oxidative stress response in vegetative tissues (PubMed:23734982). Involved in the regulation of cell size, ploidy and cell cycle progression (PubMed:23639116). Required for growth under normoxic conditions and necessary for recovery after hypoxic treatment but its action is reactive oxygen species (ROS) independent (PubMed:23639116).
messages: Expressed in developing tissues, including shoot apex, young leaves, vascular tissues, root tips, pedicels, carpels and developing seeds.
messages: Expressed throughout plant development.
messages: Nucleus
messages: Part of a complex composed of AE7, CIA1, MMS19 and NAR1. Interacts with CIA1.

3702:AT5G51880
gene id: 3702:AT5G51880
uniprot id: A0A178UU40
uniprot id: Q9LT92
names: Caution
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G39480
gene id: 3702:AT4G39480
uniprot id: A0A654FXF2
uniprot id: Q9SVB0
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G03170
gene id: 3702:AT5G03170
uniprot id: A0A178UN19
uniprot id: Q8LEJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: Expressed in the sclerenchyma cells of inflorescence stems and siliques.
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT2G40440
gene id: 3702:AT2G40440
uniprot id: A0A654F1V9
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

3702:AT3G28430
gene id: 3702:AT3G28430
uniprot id: Q8W4P9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Abnormal pale brown color of seed coat (testa) due to low flavonoid accumulation levels.
messages: Belongs to the CLEC16A/gop-1 family.
messages: Golgi apparatus membrane
messages: Involved in membrane trafficking and vacuole development through membrane fusion at the vacuole. Required for membrane trafficking machinery and accumulation of flavonoids in the seed coat.

3702:AT1G01780
gene id: 3702:AT1G01780
uniprot id: Q1ECF5
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds to actin filaments and promotes cross-linking into thick bundles. Has an actin-stabilizing activity. The actin regulatory activities are inhibited by pH > 6.8 but are [Ca(2+)] independent.
messages: Cross-links actin with a constant of dissociation of 1.7 uM.
messages: Interacts with F-actin.
messages: Predominantly expressed in flowers and in pollen grains. Detected in vasculature and roots.
messages: cytoskeleton

3702:AT5G08530
gene id: 3702:AT5G08530
uniprot id: A0A178UJ45
uniprot id: Q9FNN5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 51 kDa subunit family.
messages: Binds 1 FMN.
messages: Binds 1 [4Fe-4S] cluster.
messages: Complex I is composed of at least 49 different subunits. This is a component of the flavoprotein-sulfur (FP) fragment of the enzyme.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor. Essential for the catalytic activity and assembly of complex I.
messages: Mitochondrion inner membrane

3702:AT3G19290
gene id: 3702:AT3G19290
uniprot id: A0A1I9LNE0
uniprot id: F4JB53
uniprot id: F4JB55
uniprot id: Q9M7Q2
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family. ABI5 subfamily.
messages: DNA-binding heterodimer (By similarity). Interacts with CPK32 and the AFP proteins AFP1, AFP2 and AFP3. Interacts with FREE1 (via C-terminus) (PubMed:30962512).
messages: Defective in ABA and stress responses.
messages: Expressed in roots, leaves, flowers and immatures siliques.
messages: Functions as transcriptional activator in the ABA-inducible expression of LTI65/RD29B (AC Q04980). Binds specifically to the ABA-responsive element (ABRE) of the LTI65/RD29B (AC Q04980) gene promoter (PubMed:11005831, PubMed:11884679, PubMed:15361142, PubMed:16463099). Binds to the promoter of FREE1 and activates its transcription (PubMed:32540007).
messages: Nucleus
messages: Phosphorylated by CPK4 and CPK11 in vitro.
messages: Up-regulated by drought, salt, abscisic acid (ABA) and cold.

3702:AT5G26060
gene id: 3702:AT5G26060
uniprot id: A0A178UHY6
uniprot id: Q680N1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT3G56910
gene id: 3702:AT3G56910
uniprot id: Q9LER7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chloroplast-specific ribosomal protein cL37 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT3G58470
gene id: 3702:AT3G58470
uniprot id: A0A384KCH1
uniprot id: Q93Z55
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
messages: Cytoplasm
messages: S-adenosyl-L-methionine-dependent protein-lysine N-methyltransferase that methylates elongation factor 1-alpha.

3702:AT5G28288
gene id: 3702:AT5G28288
uniprot id: Q2V337
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G48720
gene id: 3702:AT5G48720
uniprot id: Q6NLW5
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: By X-rays and bleomycin treatment.
messages: Complete sterility.
messages: Interacts (via C-terminal domain) with MIP1.
messages: Nucleus
messages: Required for mitotic division of the generative cell nucleus and the development of mature tricellular pollen grains, and for male and female meiosis.
messages: The induction by X-rays is dependent on DNA damage signaling by ATM.

3702:AT4G32540
gene id: 3702:AT4G32540
uniprot id: A0A654FUX5
uniprot id: Q9SZY8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the FMO family.
messages: Expressed in the apical meristems and young floral primordia. Detected in the floral meristems and at the base of the floral organs.
messages: Expression relatively broad during early stages of embryogenesis and more restricted to discrete groups of cells in mature embryos. Later, expression mainly restricted to the cotyledons and the apical meristem.
messages: Involved in auxin biosynthesis, but not in the tryptamine or the CYP79B2/B3 branches. Catalyzes in vitro the N-oxidation of tryptamine to form N-hydroxyl tryptamine. Involved during embryogenesis and seedling development. Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots.
messages: No visible phenotype, due to the redundancy with the other members of the YUCCA family.
messages: Was initially (PubMed:11209081) thought to be involved in the tryptamine pathway for the biosynthesis of indole-3-acetic acid (IAA), but it has been shown (PubMed:20974893) that this is not the case. It is now admitted (PubMed:22025724, PubMed:22108406) that the YUCCA family is implicated in the conversion of indole-3-pyruvic acid (IPA) to indole-3-acetic acid (IAA).

3702:AT5G47760
gene id: 3702:AT5G47760
uniprot id: Q8GWU0
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
messages: Dephosphorylates 2-phosphoglycolate, but does not contribute to photorespiratory metabolism.
messages: No visible phenotype.

3702:AT2G20420
gene id: 3702:AT2G20420
uniprot id: A0A654EW41
uniprot id: O82662
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the succinate/malate CoA ligase beta subunit family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterodimer of an alpha and a beta subunit.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: Mitochondrion
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.

3702:AT2G20120
gene id: 3702:AT2G20120
uniprot id: F4IUE7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant COV1 protein family.
messages: Involved in the regulation of vascular patterning in the stem, probably by negatively regulating the differentiation of vascular tissue.
messages: Membrane
messages: Mostly expressed in flowers and stems, and, to a lower extent, in roots and leaves.

3702:AT3G19040
gene id: 3702:AT3G19040
uniprot id: A0A1I9LSR7
uniprot id: Q6PUA2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAF1 family.
messages: Component of the TFIID complex. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa.
messages: Expressed in roots, shoots, leaves and inflorescences.
messages: Nucleus
messages: Plants show reduced acetylation of histone H3 in light-responsive promoters, decreased chlorophyll accumulation and altered expression of about 9% of genes in young leaves.
messages: TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Core scaffold of the TFIID complex. Acts as a histone acetyltransferase involved in the light regulation of growth and gene expression. Required for H3K9, H3K27, and H4K12 acetylation on the target promoters.

3702:AT1G34500
gene id: 3702:AT1G34500
uniprot id: Q4PT07
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the wax synthase family.
messages: Catalyzes the final step in the synthesis of long-chain linear esters (waxes).
messages: Membrane

3702:AT1G24140
gene id: 3702:AT1G24140
uniprot id: Q5XF51
names: Activity Regulation
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase M10A family. Matrix metalloproteinases (MMPs) subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cell membrane
messages: Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Active on McaPLGLDpaAR-NH(2) (QF24) and beta-casein and, to some extent, on myelin basic protein (MBP) (PubMed:24156403).
messages: Mostly expressed in leaves and roots, and, to a lower extent, in flowers and stems.
messages: Repressed by acetohydroxamic acid (AHA).
messages: The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme.

3702:AT3G07100
gene id: 3702:AT3G07100
uniprot id: A0A178V9J3
uniprot id: Q9SFU0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Contributes to viral systemic infection of turnip mosaic virus (TuMV) by triggering the formation of host endoplasmic reticulum (ER)-derived viral vesicles that carry the viral RNA (vRNA) to plasmodesmata for cell-to-cell viral movement.
messages: (Microbial infection) Interacts with turnip mosaic virus (TuMV) 6K2 in COPII-coated vesicles.
messages: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
messages: COPII-coated vesicle membrane
messages: Component of the coat protein complex II (COPII), composed of at least five proteins: the Sec23/24 complex, the Sec13/31 complex and Sar1 (By similarity). Interacts with SEC221, SEC23E/SEC23A, SEC23B, SEC23G/SEC23C and SEC23F/SEC23D (PubMed:25315606).
messages: During pollen development, mainly expressed in uninucleate microspores (UNMS) and bicellular pollen (BICP), and fades out after the immature tricellular pollen (TRCP) stage (PubMed:21705385). Mostly observed in rapidly growing tissues through all developmental stages, such as shoot apices, distal root regions, and developing sepals (PubMed:25315606).
messages: Endoplasmic reticulum membrane
messages: Essential protein (PubMed:19933202). Component of the coat protein complex II (COPII), that covers ER-derived vesicles involved in transport from the endoplasmic reticulum to the Golgi apparatus (PubMed:19933202, PubMed:24587212). COPII is composed of at least five proteins: the SEC23/24 complex, the SEC13/31 complex, and the protein SAR1 (By similarity). Acts in the cytoplasm to promote the transport of secretory, plasma membrane, and vacuolar proteins from the endoplasmic reticulum to the Golgi complex (PubMed:19933202). Involved in maintaining the dynamic identity of organelles of the early secretory pathway (PubMed:19933202). Regulates cell size patterning, and prevents CDKA;1-, DEK1- and ACR4-dependent endoreduplication and giant cells formation in sepals (PubMed:25315606). Required for male gametophytes (pollen grains) development and transmission (PubMed:21705385).
messages: Golgi apparatus membrane
messages: Lethal in homozygotes (PubMed:19933202, PubMed:21705385). Non-Mendelian segregation of the mutant allele sec24a-1 due to defective male gametophytes (pollen grains) leading to a male-specific transmission defect (PubMed:21705385). In the missense recessive mutant sec24A (G92 mutation), altered endoplasmic reticulum (ER) structure with an abnormal distribution of critical component at ER export sites, thus leading to the partial accumulation of Golgi membrane proteins and a soluble secretory marker in globular structures composed of a mass of convoluted ER tubules that maintain a connection with the bulk ER (PubMed:19933202).
messages: Mainly expressed in pollen, leaves, inflorescences, roots and stems, and, to a lower extent, in cotyledons, petioles and hypocotyls.
messages: cytosol

3702:AT4G00893
gene id: 3702:AT4G00893
uniprot id: A0A178UVY7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35620
gene id: 3702:AT2G35620
uniprot id: A0A178VLP0
uniprot id: C0LGL9
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Fei' means fat in Chinese.
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in the root meristem and elongation zone, and in hypocotyls of etiolated seedlings.
messages: Interacts with the ACC synthases ACS5 and ACS9 but not ACS2, via the kinase domain.
messages: Involved in the signaling pathway that regulates cell wall function, including cellulose biosynthesis, likely via an 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated signal (a precursor of ethylene).
messages: No visible phenotype. Fei1 and fei2 double mutants exhibit disrupted anisotropic expansion (e.g. during hypocotyl elongation), impaired synthesis of cell wall polymers, and abnormal cellulose biosynthesis.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G74200
gene id: 3702:AT1G74200
uniprot id: F4HTV6
names: Caution
names: Similarity
messages: Belongs to the RLP family.
messages: Could be the product of a pseudogene. Lacks the signal peptide and the transmembrane domain, which are conserved features of the family.

3702:AT3G17510
gene id: 3702:AT3G17510
uniprot id: A0A178VIP5
uniprot id: Q8RWC9
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
messages: Interacts with CBL1 (PubMed:10590166, PubMed:11115898, PubMed:14730064). Interacts with CBL2 (PubMed:11230129). Interacts with CBL3 (PubMed:11115898, PubMed:11230129). Interacts with CBL9 (PubMed:14730064). Interacts with ECT1 and ECT2 (PubMed:16113215).
messages: May be due to intron retention.
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).
messages: Ubiquitous.

3702:AT2G18980
gene id: 3702:AT2G18980
uniprot id: A0A384KTF9
uniprot id: Q0WTC2
uniprot id: Q96518
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Expressed in the whole plant, but preferentially in roots and leaves.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT5G60970
gene id: 3702:AT5G60970
uniprot id: Q9FME3
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed during ovule development (PubMed:25378179).
messages: Expressed in cotyledons, particularly in the vascular region, in leaves, buds, flowers and immature siliques.
messages: Interacts with SPL.
messages: Nucleus
messages: Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule develpment (PubMed:25378179).

3702:AT4G39230
gene id: 3702:AT4G39230
uniprot id: Q9T030
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the NmrA-type oxidoreductase family. Isoflavone reductase subfamily.
messages: Expressed in apical meristem and cotyledon veins of young seedlings. Expressed in vascular tissues of roots, leaves, stems and petals. Expressed in pollen grains. Expressed at low levels in cauline leaves and siliques.
messages: Induced by wounding.
messages: Oxidoreductase involved in lignan biosynthesis. Catalyzes the NADPH-dependent reduction of phenylcoumaran benzylic ethers. Converts dehydrodiconiferyl alcohol (DDC) to isodihydrodehydrodiconiferyl alcohol (IDDDC), and dihydrodehydrodiconiferyl alcohol (DDDC) to tetrahydrodehydrodiconiferyl alcohol (TDDC). Plays an important role in the biosynthesis of secondary metabolites. In addition to the 8-5'-linked neolignan DDC, can reduce the 8-8'-linked lignans, pinoresinol, and lariciresinol, but with lower activities.

3702:AT2G30740
gene id: 3702:AT2G30740
uniprot id: O49339
names: Activity Regulation
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Autophosphorylated and phosphorylated by OXI1.
messages: Belongs to the protein kinase superfamily. Tyr protein kinase family.
messages: Interacts with OXI1.
messages: Probable tyrosine-protein kinase involved in oxidative burst-mediated signaling leading to specific genes expression.
messages: Strongly activated in response to phosphatidic acid (PA) and xylanase in a OXI1- and PDK1-dependent manner, and, to a lesser extent, by hydrogen peroxide and flagellin in a OXI1-dependent manner.

3702:AT4G25530
gene id: 3702:AT4G25530
uniprot id: A0A5S9XW58
uniprot id: B5BPE6
uniprot id: Q9FVI6
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Detected in siliques from 3 days after pollination until maturity of seeds.
messages: Expressed in siliques, ovules and germinating seeds.
messages: Interacts with FT.
messages: Nucleus
messages: Probable transcription factor involved in the regulation of time of flowering through the photoperiod flowering pathway. May repress FT.
messages: Under epigenetic control. In wild-type plant, FWA is silenced in the sporophyte. The epi-allele fwa mutants (which do not have a change in the nucleotide sequence of FWA) cause a late-flowering phenotype due to ectopic FWA expression in sporophytic tissues. Repression of FWA is dependent on histone H3 'Lys-4' methylation and cytosine methylation which are partly controlled by the lysine-specific demthylase 1 (LSD1) homologs, LDL1 and LDL2.

3702:AT2G41705
gene id: 3702:AT2G41705
uniprot id: A0A384L9T7
uniprot id: Q8RYE2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fluoride channel Fluc/FEX (TC 1.A.43) family.
messages: Fluoride channel required for the rapid expulsion of cytoplasmic fluoride.
messages: Membrane

3702:AT5G05130
gene id: 3702:AT5G05130
uniprot id: Q9FF61
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
messages: Nucleus
messages: Possesses intrinsic ATP-dependent nucleosome-remodeling activity. This activity may be required for transcriptional activation or repression of specific target promoters (By similarity).

3702:AT2G30370
gene id: 3702:AT2G30370
uniprot id: A0A178VW02
uniprot id: A0A178VXD7
uniprot id: A0A1P8B1K2
uniprot id: A0A5S9X353
uniprot id: F4IMT0
uniprot id: Q1PEY6
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts primarily as positive regulator of inflorescence growth. Endodermal expression is sufficient for proper inflorescence architecture (PubMed:22474391). Redundantly involved with EPFL4 in procambial development regulation. Acts also as tissue-specific regulator of epidermal pattern. Controls stomatal patterning by repressing stomatal production. TMM (AC Q9SSD1) functions to dampen or block CHAL signaling. Not processed by SDD1 (AC O64495). Acts as growth-regulatory ligand for ERECTA family receptors.
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Controls stomatal patterning.
messages: Expressed in the internal layers of the root, hypocotyl and stems, and in the midrib of developing rosette leaves. Detected in a ring of cells surrounding the vascular elements. Expressed in developing stems soon after bolting, in inflorescence stems, near the root apex and in the chalazal region of ovules. Not found in cotyledons or in stomatal precursors or stomata.
messages: Interacts with ERECTA.
messages: No visible phenotype in wild-type background, but restores stomata to hypocotyls in a tmm background. Chal and cll2 double mutants are defective in growth, with a short stature, shortened pedicells and compact inflorescence.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G00690
gene id: 3702:AT4G00690
uniprot id: A0A654FKM6
uniprot id: O65278
names: Caution
names: Function
names: Similarity
messages: Belongs to the peptidase C48 family.
messages: Could be the product of a pseudogene.
messages: Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins.

3702:AT2G42070
gene id: 3702:AT2G42070
uniprot id: A0A178VYY0
uniprot id: A0A1P8AZL7
uniprot id: P93740
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives. Can use FAD and ADP-ribose as substrates.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT5G61770
gene id: 3702:AT5G61770
uniprot id: Q9ASU7
names: Function
names: Similarity
messages: Belongs to the PPAN family.
messages: May play a role in cell growth, differentiation and cell cycle progression.

3702:AT2G18290
gene id: 3702:AT2G18290
uniprot id: A0A178VXG8
uniprot id: Q9ZPW2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the APC10 family.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating the ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several other aspects of development. Involved in the control of endoreduplication.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), which is composed of at least 10 subunits. Interacts with CDC20-1, CDC20-2, CDC27A and CDC27B.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G53210
gene id: 3702:AT1G53210
uniprot id: A0A7G2E1X1
uniprot id: Q8L636
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
messages: Cell membrane
messages: Expressed in roots, leaves, stems, petals, stamens, ovules and siliques.
messages: Induced by salt stress (PubMed:23148213, PubMed:26296956). Induced by cold stress, heat shock and abscisic acid (ABA) (PubMed:23148213). Induced by calcium and magnesium chloride, and osmotic shock (PubMed:26296956).
messages: Membrane
messages: No visible phenotype under normal growth conditions (PubMed:23148213). No visible phenotype under short day (SD) conditions, but early flowering under long day (LD) conditions (PubMed:26296956).
messages: Possesses sodium/calcium exchanger (NCX) activity when expressed in a heterologous mammalian CHO-K1 cell system (PubMed:23148213). Does not possess cation/proton exchanger (CAX) or sodium/proton (NHX) activity when expressed in a heterologous yeast cell system. Has the ability to bind calcium in vitro. Participates in the maintenance of calcium homeostasis (PubMed:23148213, PubMed:26296956). May play a role in auxin response, diurnal rhythm and flowering time (PubMed:26296956). Involved in salt stress response (PubMed:23148213).
messages: Vacuole membrane

3702:AT3G43740
gene id: 3702:AT3G43740
uniprot id: Q6NQP4
names: Function
messages: Probably involved in plant defense response.

3702:AT1G16900
gene id: 3702:AT1G16900
uniprot id: A0A654EAJ3
uniprot id: Q9FZ49
uniprot id: W8QPA0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 22 family.
messages: Endoplasmic reticulum membrane
messages: In the absence of ALG9 activity, the N-glycans transferred to proteins are aberrant, indicating that the oligosaccharyltransferase (OST) complex is substrate-tolerant.
messages: Membrane
messages: Required for N-linked oligosaccharide assembly. Adds the seventh and the ninth mannose residues in an alpha-1,2 linkage onto the dolichol-PP-oligosaccharide precursors dolichol-PP-Man(6)GlcNAc(2) and dolichol-PP-Man(8)GlcNAc(2).

3702:AT3G42473
gene id: 3702:AT3G42473
uniprot id: P82762
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: Sequencing errors.

3702:AT2G26500
gene id: 3702:AT2G26500
uniprot id: A0A178VXY8
uniprot id: O48717
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G33780
gene id: 3702:AT2G33780
uniprot id: A0A654EYJ3
uniprot id: O23660
names: Function
names: PTM
names: Subcellular Location Annotation
messages: May modulate WRKY transcription factor activities.
messages: Nucleus
messages: Phosphorylated on serine and threonine residues by MPK6.

3702:AT5G47000
gene id: 3702:AT5G47000
uniprot id: A0A654G8Z3
uniprot id: Q9FJR1
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT5G58670
gene id: 3702:AT5G58670
uniprot id: Q39032
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By abscisic acid, osmotic stress and environmental stresses such as dehydration, salinity and low temperature.
messages: Cell membrane
messages: Expressed in stems, leaves, roots, flowers and siliques. Predominant in the vascular tissues of roots and leaves.
messages: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Required for secondary responses to abscisic acid signals.

3702:AT1G53110
gene id: 3702:AT1G53110
uniprot id: Q8VZN4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant Proton pump-interactor protein family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: May regulate plasma membrane ATPase activity.

3702:AT3G51660
gene id: 3702:AT3G51660
uniprot id: A0A384L4Y9
uniprot id: Q8LG92
names: Similarity
messages: Belongs to the MIF family.

3702:AT5G62560
gene id: 3702:AT5G62560
uniprot id: Q0WUF6
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT5G53140
gene id: 3702:AT5G53140
uniprot id: A0A5S9YEP9
uniprot id: Q94AT1
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT1G58210
gene id: 3702:AT1G58210
uniprot id: Q8RWD7
names: Function
messages: Required for normal embryo development.

3702:AT3G23110
gene id: 3702:AT3G23110
uniprot id: Q9LS80
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT1G80390
gene id: 3702:AT1G80390
uniprot id: A0A2H1ZEF6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Belongs to the Aux/IAA family.
messages: Homodimers and heterodimers.
messages: Nucleus

3702:AT1G12770
gene id: 3702:AT1G12770
uniprot id: Q8W4E1
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEAD box helicase family.
messages: Embryogenesis mostly arrested at globular stage and cotyledon stage. Altered size exclusion limit of PD; abnormally maintained dilated PD at the torpedo stage and increased formation of secondary branched PD. Chlorosis (PubMed:11779812, PubMed:11874921, PubMed:19805190, PubMed:20434343). Altered plastid development (PubMed:22106293).
messages: Essential protein required during embryogenesis. Required for mitochondrial metabolism. Necessary for normal plasmodesmata (PD) development and aperture regulation.
messages: Mitochondrion
messages: Mostly expressed in leaves and flowers, and, to a lower extent, in roots, seedlings and siliques, especially in meristematic regions.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT4G12620
gene id: 3702:AT4G12620
uniprot id: A0A178UTR9
uniprot id: Q9SU24
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ORC1 family.
messages: Component of the origin recognition complex (ORC) composed of at least ORC1 (ORC1A or ORC1B), ORC2, ORC3, ORC4, ORC5 and ORC6. ORC is regulated in a cell-cycle and development dependent manner. It is sequentially assembled at the exit from anaphase of mitosis and disassembled as cells enter S phase. Interacts directly with ORC2 and ORC5 (PubMed:15358564, PubMed:16179646). Binds mostly unmodified histone H3, and, with lower efficiency, H3K4me1 H3K4me2 and H3K4me3 (PubMed:19171893, PubMed:26876097).
messages: Component of the origin recognition complex (ORC) composed of at least ORC1, ORC2, ORC3, ORC4, ORC5 and ORC6. ORC is regulated in a cell-cycle and development dependent manner. It is sequentially assembled at the exit from anaphase of mitosis and disassembled as cells enter S phase. Binds unmodified and methylated histone H3.
messages: Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
messages: Essential protein required for ovules fertilization (PubMed:15634699, PubMed:19171893). Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication (By similarity). H3K4me3 effector that regulates positively the transcription of a subset of genes (PubMed:19171893).
messages: Follow a cell-cycle regulation with a peak at the G1/S-phase (PubMed:16179646). Mostly expressed in flower buds, and, to a lower exent, in roots, leaves and stems (PubMed:16179646, PubMed:15358564).
messages: Lethal (PubMed:19171893). Unfertilized ovules but normal pollen tube attraction (PubMed:15634699).
messages: Nucleus
messages: Regulated by E2F (PubMed:16179646, PubMed:16126853). Accumulates rapidly after cell cycle reactivation by sucrose addition following cell cycle arrest mediated by sucrose deprivation (PubMed:16179646, PubMed:15358564).
messages: Restricted to proliferating cells. First active during embryogenesis, but inactive in mature embryos. Expressed in shoot and root apical meristems. Later observed in lateral root primordia and meristems. Detected in young flower buds, developing anthers and mature pollen.

3702:AT1G49260
gene id: 3702:AT1G49260
uniprot id: Q5BPX4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Membrane

3702:AT2G48100
gene id: 3702:AT2G48100
uniprot id: A0A7G2EL42
uniprot id: F4IN68
uniprot id: Q9ZU79
names: Similarity
messages: Belongs to the REXO1/REXO3 family.
messages: Belongs to the REXO4 family.

3702:AT5G10970
gene id: 3702:AT5G10970
uniprot id: A0A178UDF9
uniprot id: Q9LEU3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G49560
gene id: 3702:AT1G49560
uniprot id: A0A178WF13
uniprot id: A0A1P8AUH8
uniprot id: Q9FX84
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor involved in phosphate signaling in roots.

3702:AT1G14440
gene id: 3702:AT1G14440
uniprot id: Q9M9S0
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Homo- and heterodimer with other ZFHD proteins. Interacts with ZHD1, ZHD2, ZHD5, ZHD7, ZHD8, ZHD10 and ZHD11.
messages: Induced by exposure to long days.
messages: Mostly expressed in flowers and inflorescence.
messages: Not detected in the meristem prior to exposure to long days (LDs), but after exposure to three LDs, stable accumulation on the flanks of the meristem adjacent to floral primordia, during floral induction.
messages: Nucleus
messages: Putative transcription factor. Probably involved in the regulation of floral induction.
messages: The homeodomain differs form the typical one by having namely 4 instead of 3 extra amino acids inserted in the loop between helix 1 and helix 2.

3702:AT2G28370
gene id: 3702:AT2G28370
uniprot id: A0A178VX25
uniprot id: Q9SKN3
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT4G15500
gene id: 3702:AT4G15500
uniprot id: A0A654FPN8
uniprot id: O23402
uniprot id: W8PUL7
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: UDP-glucosyltransferase that forms glucose esters with phenylpropanoids (PubMed:11187886). Glucosylates 4-coumarate, ferulate, caffeate, sinapate and cinnamate (PubMed:11187886).

3702:AT3G57540
gene id: 3702:AT3G57540
uniprot id: A0A654FIN7
uniprot id: Q93YN8
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the remorin family.
messages: Cell membrane
messages: Collaborates with REM4.2 to positively regulate the BCTV and BSCTV susceptibility.
messages: Forms homodimer and heterodimer with REM4.2 (PubMed:25289013). Interacts with KIN11 (PubMed:25289013).
messages: Induced by mannitol, NaCl, drought, as well exogenous abscisic acid (ABA) application.
messages: Phosphorylated by KIN11.
messages: Predominantly detected in bud, stem, root, flower, silique, and leaves, and enhanced dramatically in senescence leaf.
messages: Probably ubiquitinated and degraded by the 26S proteasome pathway.
messages: Slightly reduced susceptibility to Beet Curly Top Virus (BCTV) and Beet Severe Curly Top Virus (BSCTV). The double mutant rem4.1 rem4.2 displays resistance to BCTV and BSCTV.

3702:AT5G42960
gene id: 3702:AT5G42960
uniprot id: Q8H0Y1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plastid outer envelope porin OEP24 (TC 1.B.28) family.
messages: High-conductance voltage-dependent solute channel with a slight selectivity for cations transporting triosephosphates, dicarboxylic acids, ATP, inorganic phosphate (Pi), sugars, and positively or negatively charged amino acids.
messages: Homooligomers form large rather nonselective pores in plastidial outer membranes.
messages: chloroplast outer membrane
messages: etioplast membrane

3702:AT3G44320
gene id: 3702:AT3G44320
uniprot id: A0A178VEJ6
uniprot id: P46010
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family.
messages: Can convert indole-3-acetonitrile to the plant hormone indole-3-acetic acid.
messages: Cell membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G70110
gene id: 3702:AT1G70110
uniprot id: O04534
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.

3702:AT4G21570
gene id: 3702:AT4G21570
uniprot id: A0A178V0I1
uniprot id: A0A1P8B7M3
uniprot id: O65422
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G24706
gene id: 3702:AT1G24706
uniprot id: A0A178W886
uniprot id: A0A1P8ARY6
uniprot id: A0A1P8ARZ0
uniprot id: A0A1P8AS05
uniprot id: A0A1P8AS07
uniprot id: A0A384KN02
uniprot id: A0A384L8X5
uniprot id: F4IAT2
uniprot id: F4IAT3
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export.
messages: Belongs to the THOC2 family.
messages: Component of the THO complex, which is composed of THO1, THO2, THO3, THO5, THO6 and THO7.
messages: Embryonic lethality when homozygous.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G50050
gene id: 3702:AT3G50050
uniprot id: Q9SN13
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G55870
gene id: 3702:AT1G55870
uniprot id: A0A1P8AUW2
uniprot id: Q9LG26
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 3'-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs. Essential for early development, possibly by participating in silencing certain maternal mRNAs translationally. May have a pivotal role in stress response.
messages: Belongs to the CAF1 family.
messages: Cytoplasm
messages: May be due to a competing acceptor splice site.
messages: May be due to intron retention.
messages: Nucleus
messages: Widely expressed. Expressed in roots, stems, leaves and flowers.

3702:AT5G53390
gene id: 3702:AT5G53390
uniprot id: A0A178UHJ7
uniprot id: Q5KS41
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity). Required for petals development, probably by mediating the production of fatty acids at the plasma membrane in the petal epidermis acting as lubricants that makes petal elongation smooth in narrow space between the sepals and the anthers inside floral buds (PubMed:27135508, PubMed:23314942).
messages: Cell membrane
messages: Disturbed petal development during their growth through the narrow space between sepals and anthers, leading to stuck petals in the bud during elongation, and resulting in the formation of folded petals in the open flower (PubMed:27135508, PubMed:23314942). Flattened conical-shaped petal epidermal cells associated with abnormal contacts of petals with the sepal surface (PubMed:23314942).
messages: Endoplasmic reticulum membrane
messages: First observed in sepal primordia and floral meristems (PubMed:23314942). High levels in petal primordia and elongating petals margins but weak expression in the other floral organs (PubMed:23314942). In mature flowers, accumulates in the marginal region of petals and in ovules (PubMed:23314942).
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Membrane
messages: Mostly expressed in inflorescences and flowers, especially at the periphery of petal epidermal cells.

3702:AT5G42950
gene id: 3702:AT5G42950
uniprot id: Q9FMM3
names: Disruption Phenotype
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Required for early steps of plantago asiatica mosaic virus (PlAMV, genus Potexvirus) infection (PubMed:27402258). Facilitates pathogenic growth of avirulent hemi-biotrophic bacteria P.syringae pv. tomato (Pst) DC3000 (e.g. AvrRps4 and AvrRpm1) and of the compatible oomycete H.arabidopsidis Noco2 (PubMed:28362261, PubMed:29073135).
messages: Associates with eIF4E initiation factors and the ribosome complex, thus likely contributing to the proper translation of target proteins (PubMed:28362261). Interacts directly with RPL18B and eIF4E1 (PubMed:28362261). Binds to SMG7 (PubMed:29073135).
messages: Expressed in all tissues, mostly in flowers, leaves and stems, and, to a lower extent, in roots (at protein level).
messages: P-body
messages: Quickly phosphorylated at Ser-39 after treatment of seedlings with the pathogen-associated molecular pattern (PAMP) flg22.
messages: Reduced size with a curly leaf phenotype associated with an abnormal constitutive PR1 expression (PubMed:28362261, PubMed:29073135). No spontaneous lesions, but enhanced cell death independent of salicylic acid (SA) biosynthesis or reactive oxygen species (ROS) production during pathogen infection (e.g. P.syringae and F.moniliforme) (PubMed:29073135). Heightened nucleotide-binding leucine-rich repeat protein (NLR, e.g. SNC1, RPS4, RPM1 and RPS2) accumulation and enhanced resistance against virulent pathogens (PubMed:28362261). Enhanced snc1-mediated autoimmunity including stunted growth, increased expression of pathogenesis related (PR, e.g. PR1 and PR2) genes and enhanced disease resistance against the virulent oomycete pathogen H.arabidopsidis Noco2, and reduced hemi-biotrophic bacterial growth of P.syringae pv. tomato (Pst) DC3000 expressing avirulent effectors AvrRps4 and AvrRpm1 (PubMed:28362261, PubMed:29073135). Abnormal resistance to plantago asiatica mosaic virus (PlAMV, genus Potexvirus) with the absence of infection foci prior to cell-to-cell movement (PubMed:27402258). Increased oxidative bursts, mitogen-activated protein kinase activation and callose deposition in response to the pathogen-associated molecular pattern (PAMP) flg22 (PubMed:29073135).
messages: Translational repressor involved in the negative regulation of immune receptor accumulation via the inhibition of nucleotide-binding leucine-rich repeat (NLR) receptor mediated defense (PubMed:28362261). Represses NLR protein accumulation (e.g. SNC1, RPS4, RPM1 and RPS2) (PubMed:28362261). Together with SMG7, helps to restrict effector-triggered immunity (ETI) cell death induction during pathogen infection in a salicylic acid- (SA) and reactive oxygen species- (ROS) independent manner (PubMed:29073135). Required for pathogen-associated molecular pattern (PAMP)-induced suppression of necrotrophic fungal (e.g. F.moniliforme) pathogen-derived mycotoxin-triggered (e.g. fumonisin B1) cell death (PubMed:29073135).
messages: cytosol

3702:AT5G51130
gene id: 3702:AT5G51130
uniprot id: A0A178UG11
uniprot id: A0A1P8BAK4
uniprot id: Q6NPC9
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily.
messages: Probable RNA methyltransferase.

3702:AT5G55290
gene id: 3702:AT5G55290
uniprot id: A0A178UKT6
uniprot id: Q9FLN5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase e1/e2 subunit family.
messages: Membrane
messages: Subunit of the integral membrane V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity).
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: trans-Golgi network membrane

3702:AT1G28150
gene id: 3702:AT1G28150
uniprot id: Q9FZ89
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0426 family.
messages: plastoglobule

3702:AT1G09010
gene id: 3702:AT1G09010
uniprot id: A0A178WLW7
uniprot id: Q75W54
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the glycosyl hydrolase 2 family.
messages: Glycosidase that specifically hydrolyzes the Man-beta-1,4-GlcNAc linkage in the trimannosyl core structure of N-glycans. Does not hydrolyzes pyridylamino derivatives sugar chains containing Man-alpha-1,3-Man-beta or Xylose-beta-1,2-Man-beta.
messages: Heterotrimer of 31 kDa, 28 kDa and 42 kDa subunits.
messages: The mature enzyme is proteotically cleaved into 3 subunits of 31 kDa, 28 kDa and 42 kDa.

3702:AT1G13750
gene id: 3702:AT1G13750
uniprot id: A0A178WDI0
uniprot id: Q9LMX4
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G55210
gene id: 3702:AT1G55210
uniprot id: A0A178WLS2
uniprot id: Q9C891
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT5G03580
gene id: 3702:AT5G03580
uniprot id: A0A178UIW8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G04450
gene id: 3702:AT2G04450
uniprot id: A0A654ERV1
uniprot id: Q9SJC4
names: Cofactor
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Divalent metal cations. Mg(2+) or Mn(2+).
messages: Expressed in stems and leaves. Weakly or not expressed in roots.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives, possibly using both NADH and ADP-ribose as substrates.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. In vitro, it can use both NADH and ADP-ribose as substrates; however the relevance of such substrates in vivo is unclear.

3702:AT2G45160
gene id: 3702:AT2G45160
uniprot id: A0A384KUR0
uniprot id: B7ZWR8
uniprot id: Q7XJM8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in seedlings, roots, cotyledons, leaves and flowers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT1G53920
gene id: 3702:AT1G53920
uniprot id: A0A178WKF5
uniprot id: Q9SSA7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G52315
gene id: 3702:AT1G52315
uniprot id: A0A1P8APL3
uniprot id: A0A5S9WNY7
uniprot id: F4ICV8
names: Similarity
messages: Belongs to the IST1 family.

3702:AT1G68810
gene id: 3702:AT1G68810
uniprot id: A0A5S9WTN3
uniprot id: Q9S7Y1
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer (Probable). Interacts with LHW.
messages: Nucleus

3702:AT1G15360
gene id: 3702:AT1G15360
uniprot id: A0A178WNC4
uniprot id: Q9XI33
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Detected in sepals of very young closed buds. Later, expressed in sepals and petals veins and epidermis, as well as in developing gynoecium but not in stamens. At anthesis, confined to the gynoecium, commenced in the anther, and slightly expressed in the anther filament. When petals and sepals withered, strong expression at the bottom of the silique, in the abscission zone, and in the pedicel region below it. At silique maturity, detected in the same region but only at the nectaries.
messages: Expressed in aerial organs, mostly in flowers, and in roots. Also observed at the branch points of pedicels of most young flowers, and in a patchy pattern in roots of mature plants and very young leaves in the rosette, including support cells of their trichomes.
messages: Nucleus
messages: Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G47580
gene id: 3702:AT2G47580
uniprot id: Q39244
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RRM U1 A/B'' family.
messages: Component of the spliceosome where it is associated with snRNP U1.
messages: Involved in nuclear pre-mRNA splicing (By similarity). Seems to not be involved in polyadenylation.
messages: nucleolus

3702:AT2G32980
gene id: 3702:AT2G32980
uniprot id: A0A178VQV7
uniprot id: O48767
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HAUS2 family.
messages: Contributes to the assembly of the acentrosomal spindle and phragmoplast microtubule arrays as part of the augmin complex.
messages: Lethal when homozygous.
messages: Part of the augmin complex composed of 8 subunits. The complex acts on microtubules and interacts with gamma-tubulin in spindles and the phragmoplast.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G23900
gene id: 3702:AT5G23900
uniprot id: A0A178UBD6
uniprot id: Q9FF90
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL13 family.

3702:AT1G27260
gene id: 3702:AT1G27260
uniprot id: F4HR62
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G20440
gene id: 3702:AT1G20440
uniprot id: A0A384KK16
uniprot id: P31168
uniprot id: Q0WL48
names: Induction
names: Similarity
messages: Belongs to the plant dehydrin family.
messages: By cold shock, abscisic acid (ABA) and drought stress.

3702:AT4G33465
gene id: 3702:AT4G33465
uniprot id: A0A178V1A4
uniprot id: A0A1P8B4S7
uniprot id: P82641
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Expressed at least in stem, root, rosette leaves and flower buds.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G15380
gene id: 3702:AT5G15380
uniprot id: Q9LXE5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. DRM-methyltransferase family.
messages: DRM2 is expressed at much higher levels than DRM1, which is scarcely detected, suggesting that DRM2 is the predominant de novo methylase.
messages: Involved in de novo DNA methylation. Controls asymmetric and CpNpG methylation. Required for FWA gene silencing but not for the maintenance of SUP gene silencing. Functionally redundant to CMT3 to maintain non-CpG methylation. Involved in RNA-directed DNA methylation.
messages: Nucleus

3702:AT4G00830
gene id: 3702:AT4G00830
uniprot id: Q9ASP6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: In young plants, expressed in the distal regions of cotyledons, throughout leaves and root apical meristem, lateral root meristems and young floral buds. Strongly detected in the vascular tissues of various organs (e.g. roots, leaves, hypocotyls, sepals, petals, anther filaments) as well as in the gynophore. In the gynoecium, mainly detected in apical and basal regions as well as in the developing ovules in these regions.
messages: Interacts with LHP1 in the nucleus on a common set of chromatin regions.
messages: Microsome
messages: Mild early flowering phenotype, reduced rosette diameter, abnormal floral developmental homeostasis and altered gynoecium growth determination associated with indeterminate ovaries growth. Production of ectopic inflorescences with severely affected flowers showing proliferation of ectopic stigmatic papillae and ovules in short-day conditions. Repression of FLC accompanied by an increase in histone H3 trimethylation on lysine 27 (H3K27me3). Altered expression of several genes, including LHP1-regulated genes (PubMed:21304947). Basal primed defense state due to changes in the basal expression of the salicylic acid (SA)- and jasmonic acid (JA)- dependent defense marker genes PR1 and PDF1.2, and altered composition of glucosinolates, a class of defense-related secondary metabolites. Reduced susceptibility to the hemi-biotrophic bacteria pathogen P.syringae and the necrotrophic ascomycete B.cinerea (PubMed:24914891).
messages: Nucleus
messages: Predominantly expressed in vascular and meristematic tissues. Expressed throughout development in seedlings, roots, leaves, floral buds and siliques.
messages: Slighty induced upon pathogen infection (e.g. P.syringae) (PubMed:24914891). Rapidly recruited to chromatin upon methyl jasmonate treatment (MeJA) to mediate transcriptional gene activation (PubMed:27495811).
messages: Transcriptional activator that binds DNA on GAGA-like motif and 5'-(C/G)ACGTG(G/T)C(A/G)-3' consensus motif in the promoters of target genes (PubMed:27495811). Component of ribonucleosomes, which are complexes of at least 20 other different heterogeneous nuclear ribonucleoproteins (hnRNP). hnRNP play an important role in processing of precursor mRNA in the nucleus (By similarity). Required during flower development and for cell fate determination (PubMed:21304947). Acts both as an antagonist and as a promoter of polycomb LHP1 gene regulation activity, depending of target genes, to regulate the transcription of stress-responsive and flowering genes (PubMed:21304947, PubMed:27495811). May regulate histone H3 trimethylation on lysine 27 (H3K27me3) (PubMed:21304947). Recognizes and binds histone H3 tails methylated at 'Lys-4' (H3K4me) and acetylated at 'Lys-9' (H3K9ac), leading to epigenetic activation. When in complex with LHP1, recognizes and binds histone H3 tails methylated at 'Lys-4' (H3K4me) and 'Lys-27' (H3K27me), mostly corresponding to stress-responsive genes (PubMed:27495811). May function as a suppressor of cell-autonomous immune responses involving glucosinolates, salicylic acid (SA) and jasmonic acid (JA) pathways toward pathogenic bacteria and fungi (PubMed:24914891).

3702:AT3G29780
gene id: 3702:AT3G29780
uniprot id: Q9LH43
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT2G17210
gene id: 3702:AT2G17210
uniprot id: Q9SII7
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G30820
gene id: 3702:AT1G30820
uniprot id: A0A178WJZ2
uniprot id: F4I6G9
names: Function
names: Similarity
messages: Belongs to the CTP synthase family.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.

3702:AT1G60630
gene id: 3702:AT1G60630
uniprot id: Q84MA9
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT5G40150
gene id: 3702:AT5G40150
uniprot id: A0A5S9Y9S1
uniprot id: Q9FL16
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT5G60100
gene id: 3702:AT5G60100
uniprot id: A0A1P8BEW7
uniprot id: A0A654GCP5
uniprot id: F4JXG7
uniprot id: Q9LVG4
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ARR-like family.
messages: Controls photoperiodic flowering response. Component of the circadian clock. Controls the degradation of APRR1/TOC1 by the SCF(ZTL) complex. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of APRR9, APRR7, APRR5, APRR3 and APPR1 result to circadian waves that may be at the basis of the endogenous circadian clock.
messages: Expressed with a circadian rhythm showing a peak in the evening.
messages: Interacts with APRR1/TOC1 (via N-terminus).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Lacks the phospho-accepting Asp (here Glu-116), present in the receiver domain, which is one of the conserved features of two-component response regulators (ARRs) family.
messages: Nucleus
messages: Phosphorylated by WNK1; during the night. Phosphorylation is required for optimal interaction with APRR1/TOC1.
messages: Shorter clock period but no effect on clock phase.

3702:AT2G23570
gene id: 3702:AT2G23570
uniprot id: F4IMK4
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Putative methylesterase.

3702:AT1G03910
gene id: 3702:AT1G03910
uniprot id: A0A178WHR8
uniprot id: F4I2J8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CACTIN family.
messages: Embryo lethality when homozygous.
messages: Interacts with At5g63440.
messages: Nucleus speckle
messages: Plays a role in pre-mRNA splicing by facilitating excision of a subset of introns (By similarity). Required for embryogenesis (PubMed:23454656).

3702:AT3G56110
gene id: 3702:AT3G56110
uniprot id: A0A178VNJ7
uniprot id: Q9LYN0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PRA1 family.
messages: Can form homodimer. Interacts with PRA1B2, PRA1B3, PRA1B4, PRA1B5, PRA1B6 and PRA1E.
messages: Endosome membrane
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane

3702:AT3G57710
gene id: 3702:AT3G57710
uniprot id: A0A384L127
uniprot id: Q9SVY5
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. ZRK subfamily.
messages: Component of a stable high-order oligomeric complex made of RKS1 and RPP13L4/ZAR1 which recruits Xanthomonas campestris effector XopAC/AvrAC-mediated uridylylated PBL2 in the presence of ATP to form a wheel-like pentameric resistosome; this complex triggers immunity toward X.campestris in vascular tissues (PubMed:26355215, PubMed:30948527, PubMed:30948526). Interacts with RPP13L4/ZAR1 and uridylylated PBL2 (PubMed:26355215, PubMed:30948526).
messages: Expressed at high levels in germinating seeds and at lower levels in adult leaves.
messages: Increased sensitivity to the pathogenic biotrophic bacteria Xanthomonas campestris pv. campestris (Xcc).
messages: Induced by elevated temperature (e.g. at 25 degrees Celsius).
messages: Serine/threonine-protein kinase that confers a broad-spectrum quantitative disease resistance (QDR) to the pathogenic biotrophic bacteria Xanthomonas campestris (e.g. pv. campestris (Xcc), pv. raphani, pv. armoriaceae and pv. incanae) by restricting bacterial spread to the vascular system from the infection site; X.campestris causes black rot disease in crops (PubMed:24068949, PubMed:26355215, PubMed:30948526). Seems to not have any kinase activity (PubMed:24068949).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10070
gene id: 3702:AT1G10070
uniprot id: B9DHH5
uniprot id: Q2V4P2
uniprot id: Q9M439
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Branched-chain amino acids are synthesized in chloroplasts, whereas the degradation takes place in mitochondria.
messages: Converts 2-oxo acids to branched-chain amino acids. Shows activity with L-Leu, L-Ile and L-Val as amino donors and 2-oxoglutarate as an amino acceptor, but no activity for D-isomers of Leu, Ile, Val, Asp, Glu or Ala.
messages: chloroplast

3702:AT1G55580
gene id: 3702:AT1G55580
uniprot id: A0A178WEV4
uniprot id: Q9ZWC5
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in roots and flowers.
messages: Expressed in the axils of leaf primordia and leaves from P1 to P20/22. In the axil of P1, expressed in 3 to 5 cell layers including the L1 to L3 layers of the shoot apical meristem (SAM). Then, extends from 1 or 2 cell layers in the adaxial-abaxial dimension. From P5 to P22, expression is restricted to a 1 to 2 cell-layer domain located within primordium. In the axils of older leaf primordia, expression decreases until it is no longer detectable in the axils of primordia older than P20/P22.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Plants fail to initiate axillary meristems and do not form lateral shoots during vegetative development.
messages: Probable transcription factor required for axillary (lateral) shoot meristem formation during vegetative development. Seems to act upstream of REVOLUTA.

3702:AT5G54270
gene id: 3702:AT5G54270
uniprot id: A0A178USW4
uniprot id: Q9S7M0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: In koLhcb3, accumulation of LHCB1 and LHCB2 apoproteins to adjust photosystem II (PSII) (PubMed:19880802, PubMed:26562806). However, altered macrostructural arrangement of the LHCII antenna and increased rate of PSII transition from state 1 to state 2. Increased phosphorylation level of LHCII (PubMed:19880802). Reduced responsiveness of stomatal movement to abscisic acid (ABA), therefore resulting in a decrease in tolerance to drought stress (PubMed:22143917). Deceleration of the fast phase of excitation dynamics in grana cores (PubMed:26562806).
messages: Present in M heterotrimers (PubMed:23274453). Forms heterotrimers with LHCB1, LHCB2, and LHCB5 proteins (PubMed:16551629, PubMed:15208324). The LHC complex consists of chlorophyll a-b binding proteins (PubMed:11245797).
messages: Repressed by high-light (HL) in a CAO-dependent manner (at protein level) (PubMed:16170635, PubMed:23598180). Reduced levels relative to CP43 during high light acclimation, thus helping photosystem II (PSII) structural re-arrangement (PubMed:23274453). Repressed by the herbicide bromacil (BRO) (PubMed:26802342).
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (PubMed:26562806). Modulates the rate of photosystem II (PSII) state transitions and influences PSII macrostructure (PubMed:19880802). Involved in PSII excitation energy transfer and charge separation during photosynthesis in thylakoids (PubMed:26562806).
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT2G33980
gene id: 3702:AT2G33980
uniprot id: O22951
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.
messages: chloroplast

3702:AT1G69920
gene id: 3702:AT1G69920
uniprot id: Q6NMS0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: By fungal elicitor.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: Nucleus

3702:AT5G58770
gene id: 3702:AT5G58770
uniprot id: A0A384LEU3
uniprot id: B5X0P4
uniprot id: Q56Y11
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.
messages: May be due to an intron retention.

3702:AT3G24430
gene id: 3702:AT3G24430
uniprot id: A0A178VG47
uniprot id: Q6STH5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Mrp/NBP35 ATP-binding proteins family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Expressed in aerial tissues exposed to light. Very low expression in roots.
messages: Required for photosystem I (PSI) biosynthesis and assembly. May serve as a chloroplast scaffold protein that specifically assembles iron-sulfur (4Fe-4S) clusters and transfers them to the chloroplast PSI and ferredoxin-thioredoxin (FTR) complexes. Can assemble a 4Fe-4S cluster and transfer it to apoproteins in yeast cells. Probably not required for assembly or stability of plastidic 2Fe-2S clusters.
messages: Seedling lethality when homozygous due to impaired photosystem I (PSI).
messages: chloroplast stroma

3702:AT3G44480
gene id: 3702:AT3G44480
uniprot id: F4J339
names: Domain
names: Function
names: Induction
names: Similarity
messages: Belongs to the disease resistance TIR-NB-LRR family.
messages: By infection with Hyaloperonospora arabidopsidis isolate Emco5.
messages: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis (By similarity). Probably acts as a NAD(+) hydrolase (NADase): in response to activation, catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggering a defense system that promotes cell death (PubMed:31439792, PubMed:31439793).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT2G46390
gene id: 3702:AT2G46390
uniprot id: Q9SKE0
names: Subcellular Location Annotation
names: Subunit
messages: Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.
messages: Mitochondrion inner membrane

3702:AT1G01560
gene id: 3702:AT1G01560
uniprot id: A0A178W1B0
uniprot id: A0A1P8ASZ4
uniprot id: Q9LMM5
names: Activity Regulation
names: Domain
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-198 and Tyr-200, which activates the enzyme.
messages: Interacts with MKK1, MKK2 and MKK6.
messages: May be due to introns retention.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT1G51320
gene id: 3702:AT1G51320
uniprot id: A0A178W4R9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G31650
gene id: 3702:AT1G31650
uniprot id: Q56WM6
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in pollen grains.
messages: Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP.
messages: Interacts with ARAC11/ROP1.
messages: The PRONE (plant-specific Rop nucleotide exchanger) domain is responsible for the GEF activity.

3702:AT5G37060
gene id: 3702:AT5G37060
uniprot id: Q1HDT2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane
messages: Specifically expressed in pollen.

3702:AT2G41420
gene id: 3702:AT2G41420
uniprot id: Q8S8M0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: During ovule development, expressed in the nucellus from early stage until embryo sac maturity. In mature ovules, expressed in the nucellus and the outer integument.
messages: Expressed in floral organ primordia.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but flowers of the double mutants wih1-1 and wih2-1 have defect in megasporgogenesis. Doubl mutant plants display retarded growth, and twisted leaves, siliques and roots.
messages: Required for the promotion of megasporogenesis, or promotion of germ cell formation from somatic precursor cells. Acts redundantly with WIH1. Functions in a genetic pathway downstream of SPL/NZZ and WUS and together with TRN2 in promoting megasporogenesis.

3702:AT3G19400
gene id: 3702:AT3G19400
uniprot id: A0A5S9XDU8
uniprot id: F4JB71
uniprot id: Q9LT77
names: Function
names: Similarity
messages: Belongs to the peptidase C1 family.
messages: Probable thiol protease.

3702:AT1G54510
gene id: 3702:AT1G54510
uniprot id: Q9SLI2
names: Function
names: Sequence Caution
names: Similarity
messages: Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
messages: May be involved in plant development processes.
messages: Sequencing errors.

3702:AT1G68060
gene id: 3702:AT1G68060
uniprot id: A0A5S9WQS3
uniprot id: Q9C9X0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MAP70 family.
messages: Down-regulated during senescence.
messages: Interacts with MAP70.5 and itself.
messages: Plant-specific protein that interact with microtubules. In association with MAP70.5, is essential for the normal banding pattern of secondary cell wall and for the proper development of xylem tracheary elements and wood formation.
messages: cytoskeleton
messages: phragmoplast
messages: spindle

3702:AT1G78970
gene id: 3702:AT1G78970
uniprot id: A0A5S9WVL5
uniprot id: Q9C5M3
names: Function
names: Similarity
messages: Belongs to the terpene cyclase/mutase family.
messages: Multifunctional enzyme that converts oxidosqualene to lupeol and 3,20-dihydroxylupane. Minor production of beta-amyrin, germanicol, taraxasterol and psi-taraxasterol.

3702:AT3G18370
gene id: 3702:AT3G18370
uniprot id: A0A384KVL8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G70550
gene id: 3702:AT1G70550
uniprot id: A0A178WHU8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G10450
gene id: 3702:AT5G10450
uniprot id: A0A178UDW2
uniprot id: F4KGV2
uniprot id: F4KGV5
uniprot id: P48349
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: By cold.
messages: Cell membrane
messages: Cytoplasm
messages: Increased length of hypocotyls under dark-grown conditions. Altered actin arrays in hypocotyl cells. Enhanced freezing tolerance associated with enhanced cold induction of cold-responsive C-repeat-binding factor (CBF) target genes in the double mutant lacking both GRF6 and GRF8, probably due to the suppression of ubiquitin-mediated degradation DREB1A and DREB1B degradation by the 26S proteasome pathway (PubMed:28344081, PubMed:31297122). Increased sensitivity to cold in plants lacking both B1L and GRF6 (PubMed:31297122). But enhanced freezing tolerance in the triple mutant lacking B1L, GRF6 and GRF8 (PubMed:31297122).
messages: Interacts with SERK1 in the cell membrane. Component of the SERK1 signaling complex, composed of KAPP, CDC48A, GRF6 or GRF7, SERK1, SERK2, SERK3/BAK1 and BRI1 (PubMed:15592873). Interacts with TPK1 (PubMed:17764516). Interacts with ADF1 (PubMed:26345162). Binds to CRPK1 at the plasma membrane. Interacts with DREB1A and DREB1B in the nucleus when activated by CRPK1-mediated phosophorylation upon freezing (PubMed:28344081). Interacts with CINV1 (PubMed:25256212). Binds to the N-terminal region of B1L (PubMed:31297122).
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes (By similarity). Specific negative regulator of slow-vacuolar (SV) ion channel. Mediates F-actin dynamics possibly through inhibiting ADF1 phosphorylation (PubMed:26345162). Negative regulator of freezing tolerance that modulates cold-responsive C-repeat-binding factors (CBF) DREB1A and DREB1B proteins stability by facilitating their ubiquitin-mediated degradation when activated by CRPK1-mediated phosophorylation in freezing conditions; this processus is counteracted by B1L (PubMed:28344081, PubMed:31297122).
messages: Nucleus
messages: Phosphorylated by CRPK1 in response to cold.
messages: Transphosphorylated by SERK1.

3702:AT1G48900
gene id: 3702:AT1G48900
uniprot id: A0A178WMZ2
uniprot id: A8MSA9
uniprot id: P49967
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Component of a signal recognition particle (SRP) complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). As part of the SRP complex, associates with the SRP receptor (SR) component SRPRA to target secretory proteins to the endoplasmic reticulum membrane. Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes. Displays basal GTPase activity, and stimulates reciprocal GTPase activation of the SR subunit SRPRA. Forms a guanosine 5'-triphosphate (GTP)-dependent complex with the SR subunit SRPRA. SR compaction and GTPase mediated rearrangement of SR drive SRP-mediated cotranslational protein translocation into the ER (By similarity). Requires the presence of SRP9/SRP14 and/or SRP19 to stably interact with RNA (By similarity).
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). As part of the SRP complex, associates with the SRP receptor (SR) component SRPRA to target secretory proteins to the endoplasmic reticulum membrane. Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes. Displays basal GTPase activity, and stimulates reciprocal GTPase activation of the SR subunit SRPRA. Forms a guanosine 5'-triphosphate (GTP)-dependent complex with the SR subunit SRPRA. SR compaction and GTPase mediated rearrangement of SR drive SRP-mediated cotranslational protein translocation into the ER (By similarity). Requires the presence of SRP9/SRP14 and/or SRP19 to stably interact with RNA.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). As part of the SRP complex, associates with the SRP receptor (SR) component SRPRA to target secretory proteins to the endoplasmic reticulum membrane. Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes. Displays basal GTPase activity, and stimulates reciprocal GTPase activation of the SR subunit SRPRA. Forms a guanosine 5'-triphosphate (GTP)-dependent complex with the SR subunit SRPRA. SR compaction and GTPase mediated rearrangement of SR drive SRP-mediated cotranslational protein translocation into the ER. Requires the presence of SRP9/SRP14 and/or SRP19 to stably interact with RNA.
messages: Cytoplasm
messages: Endoplasmic reticulum
messages: The M domain binds the 7SL RNA in presence of SRP19 and binds the signal sequence of presecretory proteins.
messages: The NG domain, also named G domain, is a special guanosine triphosphatase (GTPase) domain, which binds GTP and forms a guanosine 5'-triphosphate (GTP)-dependent complex with a homologous NG domain in the SRP receptor subunit SRPRA. The two NG domains undergo cooperative rearrangements upon their assembly, which culminate in the reciprocal activation of the GTPase activity of one another. SRP receptor compaction upon binding with cargo-loaded SRP and GTPase rearrangement drive SRP-mediated cotranslational protein translocation into the ER.

3702:AT5G59650
gene id: 3702:AT5G59650
uniprot id: C0LGW2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Binds to the ammonium transporter AMT1-1.
messages: Membrane
messages: Partially lethal. Survivors turn pale green and show a stunted growth. Affected in photosynthesis; difference in the quantum efficiency of PS11.
messages: Required for accurate photosynthesis.

3702:AT3G08610
gene id: 3702:AT3G08610
uniprot id: A0A178VFT6
uniprot id: Q9C9Z5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA1 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane

3702:AT2G43310
gene id: 3702:AT2G43310
uniprot id: A0A178VSY2
uniprot id: O22846
names: Similarity
messages: Belongs to the universal ribosomal protein uL18 family.

3702:AT1G04080
gene id: 3702:AT1G04080
uniprot id: A0A384LP66
uniprot id: Q93ZR3
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Altered pre-messenger RNA (pre-mRNA) splicing (PubMed:28971960). Delayed flowering under both long and short days, and slightly reduced responsiveness to gibberellin (GA) and vernalization treatment (PubMed:17380304, PubMed:28971960). Short stature and reduced seed set (PubMed:28971960). Reduced levels of FLC but increased levels of FT and SOC1 transcripts (PubMed:17380304).
messages: Belongs to the PRP39 family.
messages: Expressed ubiquitously at low levels, with highest expression in seedling roots, developing siliques and germinating seeds, and, to a lower extent, in flowers, shoot meristems, inflorescence stems, developing seeds and leaves.
messages: Involved in pre-mRNA splicing (PubMed:28971960). Involved in the determination of flowering time probably via the modulation of flowering associated genes (e.g. FLC, FT and SOC1) expression (PubMed:17380304).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G52280
gene id: 3702:AT1G52280
uniprot id: Q9C820
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT3G25110
gene id: 3702:AT3G25110
uniprot id: Q42561
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acyl-ACP thioesterase family.
messages: Plays an essential role in chain termination during de novo fatty acid synthesis. Possesses high thioesterase activity for oleoyl-ACP versus other acyl-ACPs. Substrate preference is 18:1 > 18:0 > 16:1.
messages: chloroplast

3702:AT1G51220
gene id: 3702:AT1G51220
uniprot id: A0A178WMC8
uniprot id: Q8W031
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Nucleus
messages: Probable transcriptional regulator.

3702:AT1G22015
gene id: 3702:AT1G22015
uniprot id: A0A384KFJ9
uniprot id: Q9LM60
uniprot id: W8Q3R8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G45660
gene id: 3702:AT2G45660
uniprot id: A0A178VY71
uniprot id: A0A178VZL4
uniprot id: A0A384KGG7
uniprot id: O64645
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Forms a heterodimer with AGL24 through MADS-box domain. Interacts with AGL15, AGL16 and AGL19 (PubMed:15805477, PubMed:18466303). Interacts with OXS3 in the nucleus (PubMed:31540691).
messages: Nucleus
messages: Plants are late-flowering.
messages: Rapidly up-regulated in apical meristems during the transition to flowering. Transiently expressed in inflorescence meristem. Re-appears in stage 3 flowers, in the central dome that later will develop into stamens and carpels.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription activator active in flowering time control. May integrate signals from the photoperiod, vernalization and autonomous floral induction pathways. Can modulate class B and C homeotic genes expression. When associated with AGL24, mediates effect of gibberellins on flowering under short-day conditions, and regulates the expression of LEAFY (LFY), which links floral induction and floral development.
messages: Up-regulated by gibberellins, vernalization and under long-day conditions. Gradual increase during vegetative growth. Induced by AGL24 at the shoot apex at the floral transitional stage. Repressed by SVP during the early stages of flower development. Inhibited by AP1 in emerging floral meristems (PubMed:17428825, PubMed:18339670, PubMed:19656343). Repressed by SHL to prevent flowering (PubMed:25281686).
messages: Widely expressed. Not found in the apical meristem of short-day grown plants in vegetative stage.

3702:AT4G36780
gene id: 3702:AT4G36780
uniprot id: Q94A43
names: PTM
names: Similarity
messages: Belongs to the BZR/LAT61 family.
messages: Phosphorylated. Phosphorylation increases protein degradation.

3702:AT5G35530
gene id: 3702:AT5G35530
uniprot id: A0A178U7F3
uniprot id: Q9FJA6
names: Similarity
messages: Belongs to the universal ribosomal protein uS3 family.

3702:AT3G10670
gene id: 3702:AT3G10670
uniprot id: Q9CAF5
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCI family.
messages: During seed development, first expressed in developing endosperm, embryo and suspensor and later restricted to the embryo. In seedlings, confined to apical meristems and vascular tissues. In flowers, mostly present in floral meristem, in filaments of the stamen and in the style.
messages: Essential protein. Required during embryo development, especially at early stages. Involved in chloroplast differentiation.
messages: Interacts with NAP6.
messages: Present in all organs, with higher levels in aerial parts.
messages: chloroplast

3702:AT3G49730
gene id: 3702:AT3G49730
uniprot id: P0C8A0
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G13550
gene id: 3702:AT3G13550
uniprot id: Q9LJD7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes (E2s). Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5, HYH and LAF1. Although strongly related to ubiquitin-conjugating enzyme, it has no catalytic activity by itself due to the absence of the conserved Cys active site at position 120. It can however enhance the activity of E2 conjugating enzymes.
messages: Component of the CDD complex, at least composed of COP10, DET1 and DDB1A (PubMed:15342494, PubMed:24563205). Interacts with E3 ubiquitin ligase COP1. Interacts with E2 ubiquitin conjugating UBC5. Interacts with CSN3, CSN4 and CSN8 subunits of the COP9 complex.
messages: Expressed in flower, leaf, stem and seedling. Expressed at lower level in root.
messages: Nucleus

3702:AT3G47760
gene id: 3702:AT3G47760
uniprot id: A0A1I9LMY5
uniprot id: Q9STT7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Membrane

3702:AT5G59270
gene id: 3702:AT5G59270
uniprot id: A0A1P8BBV6
uniprot id: A0A1P8BBW2
uniprot id: A0A654GCJ9
uniprot id: Q9FIF0
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Membrane

3702:AT4G30420
gene id: 3702:AT4G30420
uniprot id: A0A178V090
uniprot id: A0A384L6B8
uniprot id: Q9M0B8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT1G63970
gene id: 3702:AT1G63970
uniprot id: A0A2H1ZEF4
uniprot id: A0A654EQW8
uniprot id: Q9CAK8
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Albino phenotype and seedling lethal when homozygous. The phenotype is caused by an early arrest in chloroplast differentiation.
messages: Belongs to the IspF family.
messages: Binds 1 divalent metal cation per subunit.
messages: Circadian-regulated with a peak in the late period of dark phase and early period of the light phase.
messages: Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate into 2C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP. Is essential for chloroplast development.
messages: Homotrimer.
messages: May be due to a competing acceptor splice site.
messages: chloroplast stroma

3702:AT5G23530
gene id: 3702:AT5G23530
uniprot id: A0A178UGJ5
uniprot id: Q9LT10
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in roots, flowers and siliques.

3702:AT3G25400
gene id: 3702:AT3G25400
uniprot id: A0A384KKH6
uniprot id: Q9LSW0
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homotetramer.
messages: Hydrolyzes deoxynucleoside triphosphates (dNTPs) to the corresponding nucleoside monophosphates. Has a strong preference for dCTP and its analogs including 5-iodo-dCTP and 5-methyl-dCTP for which it may even have a higher efficiency. May protect DNA or RNA against the incorporation of these genotoxic nucleotide analogs through their catabolism.
messages: cytosol

3702:AT3G15353
gene id: 3702:AT3G15353
uniprot id: O22433
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the metallothionein superfamily. Type 15 family.
messages: Expressed in leaf mesophyll cells, root tips, and at low levels in anthers.
messages: Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Functions as metal chelator of copper (Cu) and zinc (Zn) (PubMed:18287486). Plays a role in Cu homeostasis, specifically in the remobilization of Cu from senescing leaves. The mobilization of Cu from internal sources is important for seed development (PubMed:24635746).

3702:AT5G19200
gene id: 3702:AT5G19200
uniprot id: F4JZN6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Required for sphingolipid biosynthesis. In plants, sphingolipids seems to play a critical role in mineral ion homeostasis, most likely through their involvement in the ion transport functionalities of membrane systems in the root. Is stereospecific for D-erythro-DHS production and does not produce L-threo-DHS.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems and flowers.
messages: No visible phenotype under normal growth conditions, but the double mutants tsc10a and tsc10b are not viable.

3702:AT4G34730
gene id: 3702:AT4G34730
uniprot id: O65693
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RbfA family.
messages: chloroplast

3702:AT3G18500
gene id: 3702:AT3G18500
uniprot id: Q9LS39
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.
messages: Belongs to the CCR4/nocturin family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Sequencing errors.

3702:AT1G29460
gene id: 3702:AT1G29460
uniprot id: A0A1P8AMQ0
uniprot id: Q0WPR6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals.

3702:AT1G76710
gene id: 3702:AT1G76710
uniprot id: Q84WW6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
messages: Histone methyltransferase involved in regulation of flowering time. Required for the expression of the SOC1/AGL20 gene. Required for histone H3 trimethylation on 'Lys-4' (H3K4me3) at the SOC1 locus. Prevents trimethylation on 'Lys-27' (H3K27me3) at the same locus.
messages: Late flowering.
messages: Nucleus
messages: centromere

3702:AT3G56400
gene id: 3702:AT3G56400
uniprot id: Q9LY00
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WRKY group III family.
messages: Expressed in leaves and flowers.
messages: In flowers, first observed in both stigmatic papillae and the flower abscission zone, later confined to the abscission zone (PubMed:17310369). In leaves, level increases gradually up to the point of leaf senescence (PubMed:17310369, PubMed:22268143).
messages: Interacts with WRKY30 (PubMed:22268143). Binds to BZR2/BES1 to cooperatively regulate the expression of target genes (PubMed:28576847).
messages: Nucleus
messages: Phosphorylated and destabilized by ASK7/BIN2.
messages: Regulated by MYB44 (PubMed:23067202, PubMed:23603962). Basal expression levels require the presence of endogeneous salicylic acid (SA) (PubMed:14742872, PubMed:17310369). Induced by reactive oxygen species (ROS) (PubMed:22268143). Early but transient accumulation after osmotic stress (e.g. polyethylene glycol, PEG) (PubMed:23815736). Induced by SA; early induction is NPR1-independent, but full-scale induction is NPR1-dependent (PubMed:14742872, PubMed:22325892, PubMed:22268143, PubMed:26433201). Up-regulated by benzothiadiazole (BTH) (PubMed:26433201). Repressed by jasmonic acid (MeJA) by both COI1-dependent and COI1-independent pathways (PubMed:14742872, PubMed:18713432). Triggered by the pathogenic compatible bacteria E.carotovora subsp. carotovora SCC3193 (PubMed:14742872). Induced by P.syringae pv. tomato DC3000 (PubMed:17965588, PubMed:22325892). Stimulated by ATX1 (PubMed:17965588). Up-regulated by E.amylovora (PubMed:22316300). Accumulates during leaf and flower senescence (PubMed:17310369). Induced expression upon simultaneous feeding by caterpillars (e.g. P.xylostella) and aphids (e.g. B.brassicae) at a low density, but lower levels in plants induced with both caterpillars and a high aphid density (PubMed:25339349). Responsive to rhizobacterium B.cereus AR156 in leaves (PubMed:26433201). Regulated by ATX1 by epigenetic histone H3 methylation (PubMed:18375658).
messages: Slightly reduced in size (PubMed:17310369). In wrky70-1 mutant, not alteration of responses to both JA and SA (PubMed:18713432). Activation of jasmonic acid (JA)-responsive genes in a COI1-dependent manner (PubMed:14742872). Enhanced disease susceptibility to the necrotrophic bacterial pathogen E.carotovora subsp. carotovora SCC3193. Impaired resistance to the salicylic acid (SA)-monitored fungal pathogen E.cichoracearum. Enhanced JA-induced accumulation of anthocyanins (PubMed:16623907). Compromised basal defense and reduced RPP4-dependent late up-regulation (LURP) of resistance genes (e.g. CML10/CaBP22 and LURP1) upon infection by H.parasitica. Reduced INA- (2,6-dichloroisonicotinic acid, SA analog) mediated resistance toward H.parasitica (PubMed:17313163). Promotion of both developmentally and dark-induced leaf senescence associated with abnormal expression levels of several senescence-associated markers genes (PubMed:17310369, PubMed:22268143). The double mutant wrky54 wrky70 exhibits stronger leaf senescence symptoms (PubMed:22268143). Almost no symptoms in response to E.amylovora (PubMed:22316300). Increased susceptibility to P.syringae associated with reduced PR1 induction in double mutants wrky46 wrky70 and wrky46 wrky53, and triple mutant wrky46 wrky70 wrky53. In these mutants, higher induction of PDF1.2 upon jasmonic acid (MeJA) treatment (PubMed:22325892). The double mutant wrky54 wrky70 exhibits an enhanced tolerance to osmotic stress associated with improved water retention and enhanced stomatal closure as well as salicylic acid (SA) accumulation, but a reduced induction of osmotic stress-responsive genes and reduced accumulation of the osmoprotectant proline (PubMed:23815736). Unstressed wrky54 wrky70 double mutant exhibits increased levels of SA, moderate accumulation of hydrogen peroxide H(2)O(2) and up-regulated expression of both SA and JA/ethylene (ET) responsive defense related genes; thus promoting cell wall fortification and consequently enhanc…
messages: Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (PubMed:14742872, PubMed:16623907, PubMed:17310369, PubMed:28576847). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Binds to the 5'-[CT]GACTTTT-3' motif in promoters of target genes to induce their expression (PubMed:24104863). Plays an important but not indispensable role in jasmonate and salicylic acid signaling (PubMed:18713432). Regulates positively the salicylic acid (SA)-mediated signal pathway, but negatively the jasmonic acid (JA)-mediated signal pathway, thus determining the balance between these mutually antagonistic pathways (PubMed:14742872, PubMed:16623907, PubMed:18713432, PubMed:28837631). Together with WRKY46, WRKY53 and WRKY54, prevents defense response to the necrotrophic pathogens P.carotovorum and B.cinerea, but promotes defense responses (including SA-induced pathogenesis-related (PR) genes expression) against biotrophic/hemibiotrophic SA-monitored pathogens (e.g. P.syringae, E.carotovora subsp. carotovora SCC3193 and E.cichoracearum), probably by regulating negatively the JA/ET and positively the SA signaling pathways (PubMed:28837631, PubMed:16623907, PubMed:22325892). Contributes to the suppression of jasmonic acid (MeJA)-induced expression of JA-responsive genes (e.g. PDF1.2) (PubMed:22325892, PubMed:16623907). Promotes susceptibility to JA-monitored pathogens (e.g. A.brassicicola), probably by facilitating SA-controlled suppression of JA-mediated defense. Represses the biosynthesis of the phytoalexin camalexin and indol-3-ylmethyl glucosinolate (IGS) (PubMed:16623907). Represses both SA and JA/ethylene (ET) mediated defense marker genes expression (PubMed:17310369). Negative regulator of SA biosynthesis (PubMed:28837631). Negative regulator of EDS1-dependent defense against E.amylovora (PubMed:22316300). Required for…

3702:AT2G27100
gene id: 3702:AT2G27100
uniprot id: A0A178VZD4
uniprot id: Q9ZVD0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a mediator between the cap-binding complex (CBC) and both the pre-mRNA splicing and primary microRNAs (miRNAs) processing machinery. Required for proper processing of primary miRNAs to miRNAs, thereby playing a role in RNA-mediated gene silencing (RNAi) by miRNAs. Does not participate in sense post-transcriptional gene silencing. Acts as a regulator of meristem activity and adaxial leaf fate via the miRNA gene-silencing pathway by regulating the expression of PHB and by limiting the competence of shoot tissue to respond to KNOX expression. Its function is however not limited to miRNA-mediated repression of leaf polarity genes, but rather acts as a general regulator of primary microRNAs processing. Also critical for the accumulation of the trans-acting small interfering RNA (ta-siRNA). Required for pre-mRNA splicing.
messages: Belongs to the ARS2 family.
messages: Death during embryogenesis. Weaker mutants (se-1, se-2 and se-3) also exist. Mutant se-1 displays defects in shoot and leaf development. Mutants se-2 and se-3 show adaxial leaf curling, loss of asymmetric differentiation of abaxial and adaxial cell types and development of trumpet-shaped or radial leaves. Vascular polarity of se-3 leaves is also perturbed, with xylem elements forming both adaxially and abaxially in the vascular bundle.
messages: Expressed in shoot meristems and in emerging organ primordia throughout development.
messages: Interacts with HYL1 (PubMed:16889646, PubMed:16977334). Interacts with RCF3, RS40 and RS41 (PubMed:26227967).
messages: Nucleus
messages: Nucleus speckle

3702:AT3G23870
gene id: 3702:AT3G23870
uniprot id: A0A178VIA3
uniprot id: A0A1I9LPT2
uniprot id: Q9LIR9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity).
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).
messages: Belongs to the NIPA (TC 2.A.7) family.
messages: Cell membrane
messages: Early endosome
messages: Endosome
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT5G64230
gene id: 3702:AT5G64230
uniprot id: A0A654GE29
uniprot id: F4KDK4
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

3702:AT2G31990
gene id: 3702:AT2G31990
uniprot id: A0A1P8AZR3
uniprot id: A0A1P8AZT3
uniprot id: Q5XF04
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Expressed in roots, hypocotyls, cotyledons, leaves, stems and sepals.
messages: Functions in xyloglucan synthesis by adding side chains to the xylosylated glucan backbone. Involved in the galactosylation of hemicellulose xyloglucan.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT4G38400
gene id: 3702:AT4G38400
uniprot id: A0A178V2B6
uniprot id: Q9SVE5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family.
messages: Belongs to the expansin family. Expansin-like A subfamily.
messages: Secreted

3702:AT5G10770
gene id: 3702:AT5G10770
uniprot id: A0A654G013
uniprot id: Q8S9J6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A1 family.
messages: Cell membrane
messages: Probably not redundant with AED1 and not involved in restriction of salicylic acid (SA) or systemic acquired resistance (SAR) signaling.
messages: Up-regulated in AED1 mutants.

3702:AT2G24540
gene id: 3702:AT2G24540
uniprot id: Q8LAW2
names: Domain
names: Function
names: Induction
names: Subunit
messages: Component of SCF (ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Part of the phyA-mediated signaling transduction pathway leading to the regulation of gene expression and hypocotyls elongation in response to red and far-red light exposure.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A.
messages: Rhythmic expression with highest levels at the end of the dark phase, just before the transition to light. Induction by far-red light requires phyA.
messages: The F-box is required for the interaction with SKP1A.
messages: The kelch repeats form a beta-propeller structure involved in protein-protein interaction.

3702:AT2G18720
gene id: 3702:AT2G18720
uniprot id: A0A384LFM7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G29090
gene id: 3702:AT1G29090
uniprot id: A0A178W9Z1
uniprot id: Q84W75
names: Caution
names: Similarity
messages: Belongs to the peptidase C1 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G47290
gene id: 3702:AT3G47290
uniprot id: A0A1I9LSP9
uniprot id: Q9STZ3
names: Caution
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Contains substitutions of several amino acids thought to be essential for catalytic activity. Its enzyme activity is therefore unsure.
messages: Expressed in leaves, roots, flowers and siliques.
messages: Membrane
messages: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

3702:AT1G34320
gene id: 3702:AT1G34320
uniprot id: Q9XID5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Promotes seedling growth probably via the regulation of phytosulfokine (PSK) signaling; PSK are peptide phytohormones acting as growth factors (PubMed:25062973). Together with PSI2 and PSI3, required during vegetative growth and reproduction (PubMed:25062973). May also have a function in carbohydrate metabolism (PubMed:25062973).
messages: Short roots and hypocotyls due to both a reduced cell number and reduced cell elongation (PubMed:25062973). Plants missing both PSI1 and PSI3 are dwarf and contain reduced starch levels; these phenotypes are partially rescued by sucrose (PubMed:25062973).

3702:AT5G23360
gene id: 3702:AT5G23360
uniprot id: A0A178UFJ7
uniprot id: Q9FMW5
names: Similarity
messages: Belongs to the GEM family.

3702:AT5G53060
gene id: 3702:AT5G53060
uniprot id: A0A178UIE3
uniprot id: Q8W4B1
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as negative regulator of osmotic stress-induced gene expression (PubMed:10504578). Involved in the regulation of thermotolerance responses under heat stress. Functions as an upstream regulator of heat stress transcription factor (HSF) genes. Negatively regulates HSFA1A, HSFA1B and HSFA1D, but positively controls the expression of HSFA1E, HSFA3, HSFA9, HSFB3, and DREB2C (PubMed:23087326). Forms a complex with CPL1 that modulates co-transcriptional processes such as mRNA capping and polyadenylation, and functions to repress stress-inducible gene expression (PubMed:23874224). Regulates pre-mRNA processing under salt stress (PubMed:24146632). Involved in primary miRNA processing and pri-miRNA biogenesis (PubMed:26227967, PubMed:26512101). Binds both intronless and intron-containing pri-miRNAs (PubMed:26227967). Acts as a regulator of biotic stress response gene expression and basal JA-mediated responses involved in defense. Acts as negative regulator of resistance to the fungal pathogen Fusarium oxysporum (PubMed:25985302).
messages: Expressed in roots, cotyledons, leaves, flowers and siliques.
messages: Homodimer (PubMed:24146632). Interacts with CPL1 (PubMed:23874224, PubMed:24146632, PubMed:24303021, PubMed:26512101). Interacts with RS40 and RS41 (PubMed:24146632). Interacts with DRB1/HYL1 and SE (PubMed:26227967). Interacts with CPL2 (PubMed:26512101).
messages: No visible phenotype under normal growth conditions (PubMed:23087326, PubMed:23874224, PubMed:24146632, PubMed:25985302). Mutant seedlings show increased tolerance to heat stress (PubMed:23087326, PubMed:25985302). Mutant seedlings show increased sensitivity to salt stress and abscisic acid (ABA) (PubMed:24146632). Mutant plants exhibit increased resistance to the fungal pathogen Fusarium oxysporum (PubMed:25985302).
messages: Nucleus
messages: Nucleus speckle
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transiently down-regulated by heat stress (PubMed:23087326). Down-regulated by salt stress, osmotic shock, treatment with lithium or abscisic acid (ABA), and low or high pH (PubMed:23874224).

3702:AT3G49200
gene id: 3702:AT3G49200
uniprot id: Q9M3B2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Mostly expressed in flowers and siliques.

3702:AT4G27960
gene id: 3702:AT4G27960
uniprot id: A0A178UV17
uniprot id: F4JKF3
uniprot id: P35132
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin-like protein SUMO/SMT3 from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Highest expression in young stems and old leaves. Lowest levels in floral buds, anthers and young leaves.
messages: Interacts with CHIP.
messages: Not induced by heat shock or wounding.
messages: Up-regulated during senescence, but not during the G0 to S phase transition.

3702:AT1G14660
gene id: 3702:AT1G14660
uniprot id: Q3YL57
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
messages: Cell membrane
messages: May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity.

3702:AT2G43680
gene id: 3702:AT2G43680
uniprot id: A0A178VPG7
uniprot id: A0A178VRE6
uniprot id: B3H4F6
uniprot id: Q8LPG9
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: Expressed in hypocotyls, cotyledons, leaves and petioles.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (PubMed:28115582). Regulates cell and organ shapes (prevents twisting) in aerial parts probably by regulating transverse microtubules (MT) arrays alignment (PubMed:28115582). Regulates the formation of oval xylem secondary cell-wall deposition pits through microtubule-dependent lateral inhibition of Rho GTPase domains, thus confining the area of active ROP domains within the lattice of the cortical microtubules (PubMed:28803875). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: The double mutant iqd13 iqd14 exhibits abnormally large and round secondary cell-wall pits in roots metaxylem vessels.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytoskeleton

3702:AT5G15250
gene id: 3702:AT5G15250
uniprot id: F4K9Q6
uniprot id: Q1PDW5
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the N-terminal section; belongs to the AAA ATPase family.
messages: No visible phenotype.
messages: Probable ATP-dependent zinc metallopeptidase. Involved in the degradation of the light-harvesting complex of photosystem II (LHC II) during senescence or high light acclimation.
messages: The conserved lumenal (CL) domain (84-162) is present only in some FtsH homologs from organisms performing oxygenic photosynthesis.
messages: chloroplast thylakoid membrane

3702:AT3G53740
gene id: 3702:AT3G53740
uniprot id: A0A178VA59
uniprot id: Q9M352
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL36 family.

3702:AT5G06070
gene id: 3702:AT5G06070
uniprot id: Q9LHS9
names: Developmental Stage
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Contains a slightly degenerated ERF-associated amphiphilic repression (EAR) motif, which may be involved in the activity of transcriptional repression.
messages: Not expressed in the inflorescence meristem or in the flowers at stages 1 and 2. First expressed in the precursor cells of petal primordia in stage 3 flowers and in the developing petal primordia up to stage 6. Not expressed at later stages.
messages: Nucleus
messages: Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.
messages: Strongly expressed in inflorescences and flowers, and weakly in siliques, seedlings and roots. In flowers, it is expressed in petal primordia and their precursor cells. Also expressed in the lateral root caps and the basal cells of lateral roots.

3702:AT5G26810
gene id: 3702:AT5G26810
uniprot id: A0A384KMH9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G12610
gene id: 3702:AT3G12610
uniprot id: Q00874
names: Function
messages: This protein is able to complement bacterial recA mutations, but its native function in the plant is not known.

3702:AT5G12000
gene id: 3702:AT5G12000
uniprot id: A0A178UHL6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G60140
gene id: 3702:AT3G60140
uniprot id: A0A1I9LT24
uniprot id: A0A654FJF6
uniprot id: Q9M1C9
names: Induction
names: Sequence Caution
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.
messages: By sucrose starvation, dark and senescence.
messages: Intron retention.

3702:AT3G47630
gene id: 3702:AT3G47630
uniprot id: A0A1I9LR92
uniprot id: A0A1I9LR93
uniprot id: A0A654FIA1
uniprot id: F4JBM0
uniprot id: Q9SN75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TAM41 family.
messages: Mitochondrion inner membrane

3702:AT3G63510
gene id: 3702:AT3G63510
uniprot id: A8MRX7
names: Function
names: Similarity
messages: Belongs to the dus family.
messages: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.

3702:AT2G17820
gene id: 3702:AT2G17820
uniprot id: Q9SXL4
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated predominantly on His residues. Activation probably requires a transfer of a phosphate group between a His in the transmitter domain and an Asp of the receiver domain (By similarity).
messages: Cell membrane
messages: Functions as an osmosensor histidine kinase that detects water stress and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. Positive regulator of drought and salt stress responses, and abscisic acid (ABA) signaling. Confers drought tolerance, probably by regulating levels of ABA accumulation. Plays a redundant role in regulating plant growth and development. Required for the regulation of desiccation processes during seed formation.
messages: Insensitivity to ABA, but hypersensitivity to drought and high salinity stresses. Loss of seed viability over time dur to altered desiccation.
messages: Interacts with AHP2, depending of the phosphorylation state of Asp-1075 in the receiver domain, but probably not with AHP1 and AHP3.
messages: Mostly expressed in roots, and, to a lower extent, in stems, leaves and flowers.
messages: Up-regulated in response to changes in external osmolarity, low temperature, cytokinin (CK) treatment, and dehydration.

3702:AT3G45880
gene id: 3702:AT3G45880
uniprot id: A0A1I9LMI3
uniprot id: A0A654FD51
uniprot id: A0A7G2EVH0
uniprot id: Q0WVR4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cytoplasm
messages: Endoplasmic reticulum
messages: Expressed ubiquitously including in vasculatures, leaves, siliques, roots and inflorescences (PubMed:25267112, PubMed:18713399). Present in the root meristem (PubMed:30859592). Accumulates in cotyledons and root tips of young seedlings (PubMed:33324437).
messages: Histone demethylase that demethylates 'Lys-27' (H3K27me) of histone H3 with a specific activity for H3K27me3 and H3K27me2, and involved in the regulation of gene expression (PubMed:25267112, PubMed:33324437). No activity on H3K27me1 (PubMed:25267112). Together with JMJ30, regulates the flowering-repressor FLOWERING LOCUS C (FLC) locus by removing the repressive histone modification H3 lysine 27 trimethylation (H3K27me3), especially at elevated temperatures (e.g. 29 degrees Celsius), thus preventing extreme precocious flowering (PubMed:25267112). JMJ30 and JMJ32 are regulators involved in the integration of abscisic acid (ABA) and brassinosteroids (BR) signaling pathways (PubMed:33324437). Together with JMJ30, controls ABA-mediated growth arrest during the post-germination stage in unfavorable conditions, and responses to ABA during root development, via the removal of repressive histone mark (H3K27me3) from the SnRK2.8 promoter, thus promoting SnRK2.8 expression and subsequent kinase-dependent ABI3 activation (PubMed:30859592, PubMed:30983495). In addition, removes the repressive histone marks (H3K27me3) from the BZR1 locus in response to stress and ABA, thus activating the BR signaling pathway which, in turn, inhibits the ABA signaling pathway (PubMed:33324437).
messages: No visible phenotype under normal growth conditions (PubMed:30859592). Reduced abscisic acid (ABA)-mediated growth arrest during the post-germination stage, with stronger effect in plants lacking both JMJ30 and JMJ32 (PubMed:30859592). The double mutant missing JMJ30 and JMJ32 exhibits an early-flowering phenotype at elevated temperatures (e.g. 29 degrees Celsius), associated with increased H3K27me3 levels at the FLC locus and decreased FLC expression (PubMed:25267112). The double mutant jmj30 jmj32 has longer primary roots (PubMed:30983495). In jmj30-2 jmj32-1 double mutants, reduced brassinosteroids (BR) mediated repression of ABA-inducible genes (e.g. ABI5, ABF2, ABF3 and ABF4) (PubMed:33324437).
messages: Nucleus

3702:AT1G15240
gene id: 3702:AT1G15240
uniprot id: F4HZJ6
uniprot id: F4HZJ7
names: Similarity
messages: Belongs to the sorting nexin family.

3702:AT5G09600
gene id: 3702:AT5G09600
uniprot id: A0A654FV46
uniprot id: A8MSF5
uniprot id: P0DKI0
uniprot id: P0DKI1
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.
messages: Expressed in flowers, inflorescences and stems.
messages: Membrane-anchoring subunit of succinate dehydrogenase (SDH).
messages: Mitochondrion inner membrane

3702:AT3G10540
gene id: 3702:AT3G10540
uniprot id: Q4V3C8
names: Domain
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PDPK1 subfamily.
messages: Cytoplasm
messages: Interacts with the C-terminal PIF domain of OXI1/AGC2-1.
messages: Membrane
messages: Phosphorylation on Thr-212 in the activation loop is required for full activity. PDK2 itself can autophosphorylate Thr-212, leading to its own activation (By similarity).
messages: The PH domain is responsible for the interaction with the 3-phosphoinositides. The activation loop within the kinase domain is the target of phosphorylation. The PIF-binding region on the kinase domain of PDK2 acts as a docking site, enabling it to interact with and enhance the phosphorylation of substrates containing the PIF motif (By similarity).
messages: The PIF-pocket is a small lobe in the catalytic domain required by the enzyme for the binding to the hydrophobic motif of its substrates. It is an allosteric regulatory site that can accommodate small compounds acting as allosteric inhibitors.

3702:AT1G14560
gene id: 3702:AT1G14560
uniprot id: A0A178WH98
uniprot id: A0A1P8AQ10
uniprot id: A0A1P8AQ47
uniprot id: F4HW79
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Expressed throughout the plant.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Required for the accumulation of coenzyme A in the mitochondrial matrix.

3702:AT1G68800
gene id: 3702:AT1G68800
uniprot id: A0AQW4
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Detected in axillary mersitems which appears in the axils of leaves after flowering. During bud vegetative development, down-regulated in the outer layers of the meristem, but accumulates transiently in young leaf primordia. In buds bearing flowers, restricted to the provascular tissue underlying the bud. Accumulates in axillary buds, but disappears at the time of bud outgrowth.
messages: Expressed in axillary buds, and, to a lower extent, in axillary structures such as flowers and siliques.
messages: Nucleus
messages: Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance).
messages: Transcription factor that prevents axillary bud outgrowth. May also delay early axillary bud development. Probably involved in the auxin-induced control of apical dominance.

3702:AT1G31820
gene id: 3702:AT1G31820
uniprot id: Q9C6S4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Polyamine:cation symporter (PHS) (TC 2.A.3.12) family.
messages: Cell membrane
messages: Probable cell membrane polyamine/proton symporter involved in the polyamine uptake in cells.

3702:AT2G32760
gene id: 3702:AT2G32760
uniprot id: Q8S9J3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of a complex made of VPS38/USL1 and PI3K main subunits such as VPS15, ATG6/VPS30 and VPS34 (PubMed:29897620). Interacts directly with ATG6/VPS30 and VPS34 (PubMed:29897620, PubMed:29184027).
messages: Cytoplasm
messages: Dispensable for autophagy but essential for efficient targeting and degradation of biosynthetic and endocytic cargo to the vacuole (PubMed:29184027). Required for seedling development and plant growth as well as for seed storage proteins (SSPs) vacuolar trafficking (PubMed:29184027). Controls multiple aspects of development by affecting late endosome morphology and by regulating vacuolar and endocytic cargos (e.g PIN1 and PIN2) trafficking and distributions (e.g. polarity), thus influencing auxin transport orientation (PubMed:29897620, PubMed:29184027).
messages: Endosome
messages: Late endosome membrane
messages: Multiple aspects of auxin-related developmental defects in leaves, embryogenesis, cotyledons, silique phyllotaxy and lateral roots in addition to unflattened and small leaves associated with an altered genes expression profile (PubMed:29897620, PubMed:29184027). Altered morphology of the VPS29-associated late endosomes (PubMed:29897620). Enlarged multivesicular endosomes and reduced level of organelles enriched in PI3P, associated with abnormal trafficking of vacuolar cargo and its receptor VSR2 leading to erroneous cytoplasmic distributions of endocytic cargo (e.g PIN1 and PIN2) and seed storage proteins (SSPs) (PubMed:29184027). Slightly inhibited starvation-induced autophagy, but normal constitutive autophagy (PubMed:29184027).
messages: Predominantly expressed in the shoot apical meristem (SAM) and in the leaf vascular tissues (PubMed:29897620). Also observed in roots, pollen and flowers (PubMed:29897620).
messages: Prevacuolar compartment membrane
messages: Strongly expressed in nascent leaves and, as leaves grow, progressively restricted to the vasculatures, leaves tips and hydathodes along leaves margins (PubMed:29897620). In roots, accumulates in the tips, vasculatures and lateral root initiation sites (PubMed:29897620). In flowers, present in anthers, pollen and pistils (PubMed:29897620).
messages: multivesicular body membrane

3702:AT4G38840
gene id: 3702:AT4G38840
uniprot id: A0A178V379
uniprot id: Q9T0J2
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT4G36420
gene id: 3702:AT4G36420
uniprot id: A0A178UYP0
uniprot id: O23238
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL12 family.

3702:AT2G27035
gene id: 3702:AT2G27035
uniprot id: F4IVN9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the early nodulin-like (ENODL) family.
messages: Cell membrane
messages: May act as a carbohydrate transporter.

3702:AT4G23950
gene id: 3702:AT4G23950
uniprot id: F4JPE9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Encodes a member of the mid-SUN subfamily of SUN-domain proteins. It is involved in early seed development and nuclear morphology. [TAIR].
messages: Forms homomers. Interacts with SUN3 and TIK.
messages: Membrane
messages: No visible phenotype. Embryo lethal when associated with disruption mutants SUN3 and SUN4.

3702:AT2G20580
gene id: 3702:AT2G20580
uniprot id: A0A178VZC8
uniprot id: Q9SIV2
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins (By similarity). Required during embryogenesis (PubMed:16169895). Required for optimal plant growth and stress responses (PubMed:19605416). Required for innate immunity (PubMed:22577987). Prevents JMJ27 accumulation in non-drought conditions (PubMed:34197643).
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the proteasome subunit S2 family.
messages: By salicylic acid (SA) (PubMed:22577987). Repressed by drought (PubMed:34197643).
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively. Interacts with JMJ27 (PubMed:34197643).
messages: Cytoplasm
messages: Detected in the floral meristem and primordia of floral organs. During early stages of flower development, expressed in the whole floral meristem, especially in emerging primordia. Later present in developing carpels, particularly in emerging ovule primordia. After fertilization, observed in the embryo and the chalazal endosperm. High levels at the early embryogenesis stages that fade out later. Also present in the developing seed coat, the septum, and the silique wall. In the stamens, detected at high levels in the anthers. Observed in sporogenous cells and then in tetrads of microspores.
messages: Embryo lethality due to development arrest at the globular stage with defects in the formation of the embryonic root, the protoderm, and procambium (PubMed:16169895). Increased cell sizes, anthocyanin accumulation, reduced growth rate, reduced fertility, decreased heat shock tolerance, increased oxidative stress tolerance (PubMed:19605416). Mutant displays enhanced susceptibility to the fungal pathogen G. cichoracearum and to virulent and avirulent bacterial Pto DC3000 strains, which indicated defects in basal defense and resistance (R) protein-mediated defense (PubMed:22577987).
messages: Expressed in stems, leaves, buds, flowers, siliques and developing seeds.
messages: Nucleus
messages: The embryo lethal disruption phenotype (PubMed:16169895) could be confirmed (PubMed:19605416).

3702:AT1G64620
gene id: 3702:AT1G64620
uniprot id: Q84JQ8
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

3702:AT4G35850
gene id: 3702:AT4G35850
uniprot id: Q8VYR5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G04360
gene id: 3702:AT5G04360
uniprot id: Q8GTR4
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 13 family.
messages: Double mutant shows that PU1 and ISA3 have redundant function for starch degradation. The involvement of PU1 in amylopectin synthesis is infered from the phenotype of double mutant in PU1 and ISA2.
messages: Involved in starch degradation and also probably in the trimming of pre-amylopectin chains during starch synthesis.
messages: No effect on the starch level in leaves and slight increase of water-soluble polysaccharides. No alteration of the amylase-to-amylopectin ratio. ISA3 is able to fully compensate for the loss of PU1.
messages: chloroplast stroma

3702:AT1G65780
gene id: 3702:AT1G65780
uniprot id: A0A178W8G1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G23660
gene id: 3702:AT3G23660
uniprot id: A0A384KXP3
uniprot id: F4J462
uniprot id: Q9LUG1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SEC23/SEC24 family. SEC23 subfamily.
messages: COPII-coated vesicle membrane
messages: Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER) (PubMed:24587212). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (PubMed:24587212).
messages: Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.
messages: Component of the coat protein complex II (COPII), composed of at least five proteins: the Sec23/24 complex, the Sec13/31 complex and Sar1 (By similarity). Interacts with SEC24A (PubMed:25315606).
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G63700
gene id: 3702:AT5G63700
uniprot id: A0A178U8L2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G08590
gene id: 3702:AT1G08590
uniprot id: A0A178WET4
uniprot id: Q9FRS6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with HIRD11.
messages: Involved in the regulation of procambium maintenance and polarity during vascular-tissue development (PubMed:17570668). Phosphorylates HIRD11 and LHCA1 in vitro (PubMed:25602612).
messages: Reduced procambial cells number, and adjacent or interspersed xylem and phloem formation.

3702:AT3G54050
gene id: 3702:AT3G54050
uniprot id: A0A654FGI2
uniprot id: P25851
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FBPase class 1 family.
messages: Binds 3 Mg(2+) ions per subunit.
messages: Catalyzes the irreversible reaction from fructose-1,6-bisphosphate to fructose-6-phosphate and inorganic phosphate, to regenerate the primary CO(2) acceptor molecule, ribulose-1,5-bisphosphate (Probable). Involved in the regulation of photosynthetic electron flow and sucrose synthesis (PubMed:15448173, PubMed:20081115). Its activity is critical for normal plant development and important for the regulation of a wide range of metabolic processes (PubMed:25743161).
messages: Homotetramer.
messages: In plants there are two FBPase isozymes: one in the cytosol and the other in the chloroplast.
messages: Light activation through pH changes, Mg(2+) levels and also by light-modulated reduction of essential disulfide groups via the ferredoxin-thioredoxin f system.
messages: Reduced growth rate, dwarf phenotype and delayed flowering.
messages: chloroplast stroma

3702:AT5G49840
gene id: 3702:AT5G49840
uniprot id: F4K7F6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent specificity component of the mitochondrial Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
messages: Belongs to the ClpX chaperone family.
messages: Mitochondrion

3702:AT4G15560
gene id: 3702:AT4G15560
uniprot id: A0A178V5I0
uniprot id: Q38854
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino phenotype and seedling lethal when homozygous. The phenotype is caused by an early arrest in chloroplast differentiation.
messages: Belongs to the transketolase family. DXPS subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development.
messages: Circadian-regulated with a peak in the late period of dark phase and early period of the light phase.
messages: Homodimer.
messages: Plants over-expressing CLA1 show increased levels of plastid isoprenoids derived from the methylerythritol 4-phosphate (MEP) pathway, such as chlorophylls, tocopherols, carotenoids, abscisic acid, and gibberellin (PubMed:11264287). Mutant plants treated with exogenous mevalonic acid partially recover chlorophyll accumulation and plastid development (PubMed:12447549).
messages: Widely expressed.
messages: chloroplast stroma

3702:AT1G51040
gene id: 3702:AT1G51040
uniprot id: Q9C680
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts on phosphatidylinositol (PtdIns) in the first committed step in the production of the second messenger inositol-1,4,5,-trisphosphate.
messages: Belongs to the PI3/PI4-kinase family. Type III PI4K subfamily.
messages: Membrane

3702:AT1G04210
gene id: 3702:AT1G04210
uniprot id: A0A178W6H8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G06180
gene id: 3702:AT3G06180
uniprot id: A0A384KZ76
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G09720
gene id: 3702:AT1G09720
uniprot id: F4I131
names: Function
names: Similarity
messages: Belongs to the NET family.
messages: Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex.

3702:AT3G13560
gene id: 3702:AT3G13560
uniprot id: A0A654F6U5
uniprot id: Q94CD8
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: Cell membrane
messages: Contains two additional disulfide bonds.

3702:AT2G25830
gene id: 3702:AT2G25830
uniprot id: A0A178VXB7
uniprot id: O82314
names: Similarity
messages: Belongs to the TACO1 family.

3702:AT4G02810
gene id: 3702:AT4G02810
uniprot id: Q9SY06
names: Developmental Stage
names: Function
names: Similarity
names: Tissue Specificity
messages: Able to repress WUS when constitutively overexpressed, but have no effect on CLV3.
messages: Belongs to the fantastic four family.
messages: Expressed in the shoot apex, stamens, anthers and young siliques. Detected in provascular and vascular tissue.
messages: Expressed throughout development. During germination, initially restricted to the hypocotyl, but expression gradually shifts to the root and on day 6, to the vasculature of the cotyledons and then of the leaves. Increased expression in the shoot apex during the transition to flowering. Induced in the inflorescence vasculature and young flower buds as flowering commenced. Expressed in developing embryos from the early heart stage until torpedo stage.

3702:AT4G33430
gene id: 3702:AT4G33430
uniprot id: A0A178UUK2
uniprot id: F4JIX9
uniprot id: Q94F62
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: An article reported the role of autophosphorylation of Tyr-610 in brassinosteroid signaling; however, this paper was later retracted. A second article from the same group reported the role of phosphorylation; however, this paper was also retracted.
messages: Autophosphorylated on Ser-290, Thr-312, Thr-446, Thr-449, Thr-455 and Tyr-610. Probable autophosphorylation on additional Tyr residues. Transphosphorylated by BRI1. It is not sure whether Thr-589 or Ser-595 is the target of the phosphorylation. The phosphorylations on Thr and Tyr are induced by brassinolide. Phosphorylation at Ser-286, Ser-290 Thr-446 or Thr-449 is not critical for flagellin signaling. Phosphorylated on Ser-612 upon SCOOP12 detection; a post-translational modification required for immune signaling (PubMed:33514716).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Contains one leucine-zipper motif and one pair of conservatively spaced Cys (Cys pair) involved in forming heterodimers.
messages: Dual specificity kinase acting on both serine/threonine- and tyrosine-containing substrates. Controls the expression of genes associated with innate immunity in the absence of pathogens or elicitors. Involved in brassinosteroid (BR) signal transduction. Phosphorylates BRI1. May be involved in changing the equilibrium between plasma membrane-located BRI1 homodimers and endocytosed BRI1-BAK1 heterodimers. Interaction with MSBP1 stimulates the endocytosis of BAK1 and suppresses brassinosteroid signaling. Acts in pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) via its interactions with FLS2 and EFR, and the phosphorylation of BIK1. Involved in programmed cell death (PCD) control. Positively regulates the BR-dependent plant growth pathway and negatively regulates the BR-independent cell-death pathway (PubMed:17583510, PubMed:17600708, PubMed:18667726, PubMed:18694562, PubMed:19124768, PubMed:20018402, PubMed:20404519, PubMed:21693696). Phosphorylates BIR2 and thus promotes interaction with BIR2 (PubMed:24388849, PubMed:24556575). This interaction prevents interaction with FLS2 in the absence of pathogen-associated molecular patterns (PAMP) (PubMed:24388849, PubMed:24556575). Component of the RLP23-SOBIR1-BAK1 complex that mediates NLP-triggered immunity (PubMed:27251392). Required for PSK promotion of seedling growth and protoplast expansion (PubMed:26071421). CNGC17 and AHAs form a functional cation-translocating unit that is activated by PSKR1/BAK1 and possibly other BAK1/RLK complexes (PubMed:26071421). Required during SCOOP small peptides (e.g. RGF1, SCOOP10 and SCOOP12) perception and signaling; associates with MIK2 as a coreceptor upon MIK2 perception of SCOOP peptides, and relays the signaling through the activation of receptor-like cytosolic kinases (RLCKs) BIK1 and PBL1 (Probable) (PubMed:30715439, PubMed:34535661).
messages: Endosome membrane
messages: Expressed ubiquitously.
messages: Interaction with BRI1 activates both receptor kinases and the full activation of either receptor kinase requires transphosphorylation by their partners. This interaction in vitro is magnesium dependent. Instantaneous heteromeric complex formation between FLS2 and BAK1 and reciprocal transphosphorylation after binding of the flagellin flg22 ligand to FLS2. The kinase activity is not required for the complex formation.
messages: Interacts constitutively with BIR2, thereby preventing interaction with the ligand-binding LRR-RLK FLS2. Upon infection, pathogen-associated molecular patterns (PAMP) perception leads to BIR2 release from the BAK1 complex and enables the recruitment of BAK1 into the FLS2 complex (PubMed:24388849, PubMed:24556575). Heterodimer with FLS2 (PubMed:24114786). Monomer. Heterodimer with BRI1 in the endosomes. Component of the SERK1 signaling complex, composed of KAPP, CDC48A, GRF6 or GRF7, SERK1, SERK2, SERK3/BAK1 and BRI1. Interacts with the P.syringae AvrPto and hopAB2/AvrPtoB, ERD13, PEPR1 and PEPR2. Interacts (via extracellular region) with MSBP1. Interacts with the EF-Tu receptor EFR and FLS2 in a specific ligand-induced manner. Interacts with TMK4/BARK1. Part of a functional complex containing PSKR1, BAK1, CNGC17, and AHA (PubMed:26071421). Interacts with CNGC17 and PSKR1 (PubMed:26071421). Binds to IOS1 which triggers FLS2-BAK1 complex formation upon microbe-associated molecular patterns (MAMPs) treatment (PubMed:27317676). Interacts with ERECTA in a EPF2-induced manner. Interacts with ERL1 in a EPF1-induced manner. Interacts with TMM (PubMed:26320950). Component of a trimeric complex composed of RLP23, SOBIR1 and BAK1. BAK1 is recruited into a pre-formed RLP23-SOBIR1 complex in a ligand-dependent manner (PubMed:27251392). In the presence of the signal peptide RGF1, interacts with RGI3/RGFR1 and RGI4/RGFR2/SKM2 (PubMed:27229311). Forms a complex with MIK2 in response to SCOOP12 perception (PubMed:33514716, PubMed:34535661).
messages: Phosphorylated residues T-450 and T-455 have stronger functional effects than other phosphorylated residues by interacting with both the catalytic and activation loops to achieve a conformational stability, locking BAK1 kinase in the active conformation.
messages: Semi-dwarfed phenotype, altered leaf morphology and reduced sensitivity to brassinolide and flagellin. Enhanced chlorosis and lesion formation upon pathogen infection. Bak1 and bkk1 double mutants are seedling lethal. Impaired SCOOP12-mediated growth inhibition (PubMed:30715439). Partially compromised SCOOP10- and SCOOP12-induced root growth inhibition and reactive oxygen species (ROS) production; fully compromised in the double mutant bak1-5 serk4 (PubMed:34535661).
messages: The interaction with the bacterial effectors AvrPto and AvrPtoB/hopAB2 interfers with FLS2 binding and plant immunity.
messages: Up-regulated by flagellin and harpin.

3702:AT2G30440
gene id: 3702:AT2G30440
uniprot id: O04348
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family.
messages: Cleaves the thylakoid-transfer domain from a chloroplast protein.
messages: chloroplast thylakoid membrane

3702:AT5G02060
gene id: 3702:AT5G02060
uniprot id: A0A654FXQ9
uniprot id: Q9LZM5
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Expressed in leaves, exclusively in hair cells (e.g. differentiated trichomes and immature cells).
messages: Homodimer and heterodimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT3G23590
gene id: 3702:AT3G23590
uniprot id: Q9LUG9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 33 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator.
messages: Component of the Mediator complex.
messages: No visible phenotype, but higher levels of sinapate esters in leaves.
messages: Nucleus

3702:AT5G49665
gene id: 3702:AT5G49665
uniprot id: Q9LTA6
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase involved in the regulation of root growth. Acts as positive regulator of root gravitropism. Possesses E3 protein ligase activity in vitro.
messages: Expressed in root tips and leaf primordia.
messages: Interacts with SINAT1, SINAT2, SINAT3, SINAT4, SINAT5, TOR1/SPR2 and FIP2.
messages: No visible phenotype under normal growth conditions, but mutant seedlings exhibit enhanced root wavy growth and curvature in response to gravitropism.

3702:AT1G13020
gene id: 3702:AT1G13020
uniprot id: Q9SAD7
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-4 subunit B family.
messages: Homodimer (By similarity). Nonspherical monomer. mRNA-discriminating component of initiation complexes (PubMed:19493973).
messages: Nucleus
messages: Over-expression in sns-D leads to programmed cell death (PCD) in the leaves characterized by spontaneous necrotic spots on the rosette leaves under aseptic conditions. Embryo lethal when homozygote.
messages: Phosphorylated.
messages: Promotes the eIF4F and eIF4A RNA-dependent ATP-hydrolysis activity with different efficiency depending on mRNAs, thus providing mRNA discrimination during initiation of translation.

3702:AT1G17190
gene id: 3702:AT1G17190
uniprot id: A0A654EAG6
uniprot id: Q9SHH8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: By alachlor, metolachlor and benoxacor.
messages: In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB). May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: Is involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.
messages: cytosol

3702:AT5G27490
gene id: 3702:AT5G27490
uniprot id: F4K4B8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YIP1 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT4G30030
gene id: 3702:AT4G30030
uniprot id: Q9SZV6
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G69840
gene id: 3702:AT1G69840
uniprot id: Q9CAR7
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: Self-interacts and forms heteromers. Interacts with AHK2. Interacts with NB-LRR class of R proteins (e.g. RPS2 or RPM1) before R proteins are activated by the effectors.

3702:AT2G46340
gene id: 3702:AT2G46340
uniprot id: Q9SYX2
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By PHYA under continuous far-red light. Circadian-regulation under constant light. Up-regulated by red, far-red and blue light, and during the night phase under short-day conditions.
messages: Controls normal photoperiodic flowering and regulates circadian rhythms. Required for suppression of photomorphogenesis in dark-grown seedlings and for normal elongation growth of adult plants. Integral component of the COP1/SPA E3 ubiquitin-protein ligase complex. Involved in HY5, HFR1, LAF1 and CO degradation.
messages: Interacts with CO, COP1, HFR1, HY5 and PHYA. Light induces dissociation of the SPA1/COP1 complex. Binds to CRY1 in response to blue light, this interaction prevents SPA1/COP1 complex formation but stimulate CRY2/COP1 complex, and thus avoid COP1-dependent degradation of the transcription factor HY5 by the proteasome and promotes hypocotyl elongation (PubMed:21514160, PubMed:21511872, PubMed:21511871, PubMed:22739826).
messages: Nucleus
messages: Nucleus speckle
messages: PML body
messages: Reduced hypocotyl elongation in blue light.
messages: The coiled-coil domain (557-589) and the WD-repeat domain are sufficient for SPA1 function. The coiled-coil domain is necessary and sufficient for interactions with HFR1 and COP1. The protein kinase domain may play a role in promoting destabilization of SPA1 under far-red light. The DWD box is required for interaction with DDB1A (By similarity).

3702:AT3G24590
gene id: 3702:AT3G24590
uniprot id: Q8H0W1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family.
messages: Involved in the maturation of the plastid protein translocation channel. Required for the biogenesis of plastid internal membranes. May also function as a thylakoidal processing peptidase.
messages: Plants are albino and seedling lethal.
messages: chloroplast envelope
messages: chloroplast thylakoid membrane

3702:AT3G13080
gene id: 3702:AT3G13080
uniprot id: A0A178VHA7
uniprot id: A0A1I9LTU2
uniprot id: F4JB38
uniprot id: Q9LK64
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: By 1-chloro-2,4-dinitrobenzene (CDNB), primisulfuron (PS), aminotriazole, benoxacor, oxabetrinil and IRL 1803, and, to a lower extent, by cloquintocet, fenchlorazol and fluorazol.
messages: Glutathione-conjugate transport is inhibited by decyl-glutathione and, to a lower extent, by GS-GS, but not by GSH. All transports are inhibited by vanadate.
messages: Membrane
messages: Pump for glutathione S-conjugates. Mediates the transport of glutathione conjugates such as chlorodinitrobenzene-GS (DNB-GS), and of chlorophyll catabolites such as Bn-NCC-1. Transports also heavy metals such as cadmium (Cd).
messages: Ubiquitous.

3702:AT2G30360
gene id: 3702:AT2G30360
uniprot id: A0A5S9X2L0
uniprot id: O22932
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Acts as a negative regulator of the plasma membrane proton pump AHA2 by preventing its interaction with 14-3-3 protein.
messages: Expressed in hypocotyls and roots upon germination. As seedlings mature, detected in the vascular tissue of both the stem and leaf.
messages: Expressed in roots and stems, but barely detectable in flowers and siliques.
messages: Increased proton extrusion and resistance to high external pH.
messages: Interacts with CBL1, CBL2, CBL3, CBL4/SOS3, and CBL5.
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).
messages: Up-regulated by salt, drought, abscisic acid and glucose, but not by cold.

3702:AT5G40840
gene id: 3702:AT5G40840
uniprot id: A0A1P8B9P6
uniprot id: Q9FQ20
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the rad21 family.
messages: Component of the cohesin complex.
messages: Intron 9 uses an acceptor splice site 3 nucleotides downstream of the one used in isoform 1.
messages: Low expression in shoots, buds, siliques, leaves and roots. Found in, but not limited to, actively dividing cells: in procambium, protoderm and ground meristem in roots, and in shoot and floral meristems.
messages: May be involved in sister chromatid cohesion during mitosis.
messages: Nucleus

3702:AT3G07300
gene id: 3702:AT3G07300
uniprot id: A0A384L2N7
uniprot id: B3H7H1
uniprot id: Q9SFW0
names: Similarity
messages: Belongs to the eIF-2B alpha/beta/delta subunits family.

3702:AT4G12080
gene id: 3702:AT4G12080
uniprot id: A0A178V7H8
uniprot id: Q8VYJ2
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Chromosome
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). May play a function in the positioning of chromatin fibers within the nucleus.
messages: nucleoplasm

3702:AT4G39100
gene id: 3702:AT4G39100
uniprot id: Q9FEN9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SHL1/EBS protein family.
messages: Chromatin remodeling factor that binds to methylated histone (e.g. H3K4me2/3) to prevent their acetylation (e.g. H3K9K14Ac), likely by recruiting histone deacetylase (HDAC) complexes, and thus regulate the transcription of target genes (PubMed:25281686). Required during development and for fertility, probably by modulating developmental gene expression (PubMed:11129039, PubMed:15082927, PubMed:25281686). Promotes development speed, but at fitness cost (PubMed:11129039). Involved in the chromatin-mediated repression of floral initiation and controls genes regulating flowering. Negatively regulates the expression of the floral integrator SOC1, by preventing high levels of H3 acetylation, thus maintaining an inactive chromatin conformation (PubMed:25281686).
messages: Expressed at all stages of development, from seedlings to adult reproductive phase.
messages: Expressed ubiquitously (PubMed:25281686). Mostly expressed in roots, stems, leaves and flowers, and, to a lower extent, in siliques (PubMed:11129039).
messages: In antisense plants, dwarf phenotype characterized by stunted axis, dark-green leaves, compact rosette structure, less small leaves, fewer flowers and seeds, and associated with a delayed development and late flowering (PubMed:11129039). In shl-2, acceleration of flowering, especially in short-days (SD), associated with a shorter adult vegetative phase. Other developmental defects include premature senescence, smaller leaves and siliques. Higher H3K9K14 acetylation in the genomic region of the SOC1 locus (PubMed:25281686).
messages: Nucleus
messages: Recognizes di- and trimethylated histone H3 at lysine 4 (PubMed:25281686). Interacts with HDA6 (PubMed:25281686). Interacts with DEK3 (PubMed:25387881).

3702:AT2G19620
gene id: 3702:AT2G19620
uniprot id: A0A178VUN2
uniprot id: A0A1P8AYR3
uniprot id: A8MRP5
uniprot id: Q9ZUN1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDRG family.
messages: Cytoplasm
messages: Interacts with the heterodimers formed by GB1 and GG1, or GB1 and GG2. Interacts with RGS1.
messages: Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1 (PubMed:19948787). Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL3 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment and maintenance of auxin gradients (PubMed:24223735).

3702:AT5G20165
gene id: 3702:AT5G20165
uniprot id: A0A178UA21
uniprot id: A0A384L7N9
uniprot id: A8MSB3
uniprot id: F4K459
uniprot id: Q6IDB1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KISH family.
messages: Golgi apparatus membrane
messages: Involved in the early part of the secretory pathway.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G16130
gene id: 3702:AT5G16130
uniprot id: A0A178UHM5
uniprot id: Q8LD03
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS7 family.

3702:AT5G65110
gene id: 3702:AT5G65110
uniprot id: A0A178UA38
uniprot id: F4KGI8
uniprot id: O65201
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the acyl-CoA oxidase family.
messages: Binds 1 FAD per subunit.
messages: Catalyzes the desaturation of long-chain acyl-CoAs to 2-trans-enoyl-CoAs. Active on substrates longer than C14 and mostly with C18-CoA. Activity on long-chain mono-unsaturated substrates is double than with the corresponding saturated substrates.
messages: Expressed mainly in flowers and young seedlings. Lower expression in roots, leaves and bracts.
messages: Homodimer.
messages: Induced by dehydration and abscisic acid (ABA).
messages: Induced by seed imbibition with a peak at day 2 and then declines steadily until day 8.
messages: Peroxisome

3702:AT2G41630
gene id: 3702:AT2G41630
uniprot id: A0A178VYM4
uniprot id: P48512
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Associates with TFIID-IIA (DA complex) to form TFIID-IIA-IIB (DAB-complex) which is then recognized by polymerase II (By similarity). Interacts with TBP2 (PubMed:19376835). Interacts with ATHB-7 and ATHB-12 (PubMed:24531799).
messages: Belongs to the TFIIB family.
messages: Embryonic lethality and aborted seed when homozygous.
messages: General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II (By similarity). Interacts with TBP2 and is required for activated transcription and possibly basal transcription (PubMed:10634912). Plays important roles in pollen tube growth, guidance, and reception as well as endosperm development. Is partially functionally different from TFIIB2 and PBRP2 (PubMed:23547107).
messages: Nucleus

3702:AT5G41340
gene id: 3702:AT5G41340
uniprot id: A0A1P8BD13
uniprot id: A0A654G6Z0
uniprot id: P42748
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Expressed in antipodal cells of developing seeds and in the vascular junction between the cotyledons or leaves and the hypocotyl. Not expressed in pollen.
messages: Not induced by heat shock.

3702:AT1G54010
gene id: 3702:AT1G54010
uniprot id: Q8W4H8
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Endoplasmic reticulum
messages: Expressed in 10-day-old seedlings.
messages: Expressed mainly in roots.
messages: Involved in the control of the PYK10 complex size and possibly substrate specificity. May be exported from the endoplasmic reticulum upon interaction with MVP1.
messages: Lacks the conserved active site 'GDSL' motif. Its enzyme activity is therefore unsure.
messages: Part of the PYK10 complex. Interacts with MVP1.

3702:AT2G18480
gene id: 3702:AT2G18480
uniprot id: A0A178VVM0
uniprot id: Q9ZNS0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Plasma membrane sugar-proton symporter.

3702:AT1G07080
gene id: 3702:AT1G07080
uniprot id: Q93VQ6
names: Similarity
messages: Belongs to the GILT family.

3702:AT3G06483
gene id: 3702:AT3G06483
uniprot id: A0A178VP66
uniprot id: Q9SBJ1
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated on Ser residues near N-terminus.
messages: Belongs to the PDK/BCKDK protein kinase family.
messages: Elevation of the mitochondrial pyruvate dehydrogenase (PDH) complex (mtPDC) activity. Altered vegetative growth with reduced accumulation of vegetative tissues, early flower development and shorter generation time. Increased seed oil content and seed weight at maturity.
messages: Expressed constitutively and ubiquitously.
messages: Homodimer.
messages: Mitochondrion
messages: Mitochondrion matrix
messages: Serine protein kinase that inhibits the mitochondrial pyruvate dehydrogenase (PDH) complex (mtPDC) by phosphorylation of the E1 alpha subunit on Ser residues, thus contributing to the regulation of glucose metabolism.
messages: Treatment with the His-directed reagents diethyl pyrocarbonate (DEPC) and dichloro-(2,2*:6*,2(-terpyridine))-platinum(II) dihydrate inhibits kinase activity, including autophosphorylation.

3702:AT3G62930
gene id: 3702:AT3G62930
uniprot id: A0A178V922
uniprot id: Q9LYC8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.

3702:AT2G43920
gene id: 3702:AT2G43920
uniprot id: A0A178VP08
uniprot id: O80562
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.
messages: No visible phenotype under normal growth conditions.
messages: S-adenosyl-L-methionine-dependent methyltransferase. Involved in glucosinolate metabolism and defense against phytopathogens (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G15358
gene id: 3702:AT3G15358
uniprot id: A0A384LBZ8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G18330
gene id: 3702:AT2G18330
uniprot id: A0A654EV73
uniprot id: Q9ZPW5
names: Similarity
messages: Belongs to the AAA ATPase family.

3702:AT2G31985
gene id: 3702:AT2G31985
uniprot id: A0A178VMF4
uniprot id: Q8GWR2
names: Similarity
messages: Belongs to the OBAP family.

3702:AT4G34580
gene id: 3702:AT4G34580
uniprot id: F4JLE5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Exhibits short branched root hairs.
messages: Golgi apparatus membrane
messages: Predominantly expressed in roots. Detected solely in root trichoblast cell files engaged in root hair growth, hydathodes, shoot apical meristem, and apical cells of the root cap.
messages: Required for transport of secretory proteins from the Golgi complex (By similarity). Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro. Plays a role in root hair tip elongation as a key regulator of polarized membrane trafficking. May promote the PtdIns(4,5)P2 synthesis and organization in root hair membrane.

3702:AT2G03750
gene id: 3702:AT2G03750
uniprot id: A0A178VL58
uniprot id: Q8RV79
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: No effect on sensitivity to salicylic acid.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G60740
gene id: 3702:AT3G60740
uniprot id: Q8L5R3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the PILZ group of genes that disrupt, when mutated, the microtubule cytoskeleton and produce mushroom-shaped ('pilz' in German) embryos.
messages: Belongs to the TBCD family.
messages: Embryo lethality. Embryo development limited to the formation of a few giant cells lacking microtubules but not actin filaments, each with one to several nuclei. Failure to localize KNOLLE in mitotic cells. Presence of abnormal endosperm with giant polyploid nuclei.
messages: Regulates microtubule function in seed development. Required for development of both embryo and endosperm tissue. Not essential for cell viability. Probably involved in the binding of beta-tubulin in the multimeric supercomplex.
messages: Supercomplex made of cofactors A to E. Cofactors A and D function by capturing and stabilizing tubulin in a quasi-native conformation. Cofactor E binds to the cofactor D-tubulin complex; interaction with cofactor C then causes the release of tubulin polypeptides that are committed to the native state (By similarity).

3702:AT1G08770
gene id: 3702:AT1G08770
uniprot id: A0A178W4Z3
uniprot id: Q9FRR1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PRA1 family.
messages: Endosome membrane
messages: Expressed in hypocotyls, roots, lateral roots, columella cells, leaves and shoot apex.
messages: Interacts with PRA1B1, PRA1B2, PRA1B3, PRA1B4, PRA1B5 and PRA1B6.
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane

3702:AT4G20550
gene id: 3702:AT4G20550
uniprot id: P0CJ60
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT2G04550
gene id: 3702:AT2G04550
uniprot id: A0A178VVJ8
uniprot id: Q84JU4
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein-tyrosine phosphatase family.
messages: During flower development, detected in sepals, anther filaments, and carpels. During germination, levels decline slightly two days after imbibition.
messages: Expressed in root tips and vasculature, cotyledons, stems, leaves vasculature and hydathodes, flowers, siliques, and seeds.
messages: Impaired responses to phytohormones such as indole-3-butyric acid, indole-3-acetic acid (auxin), synthetic auxins, auxin transport inhibitors, and abscisic acid (ABA). Plants exhibit long roots and short hypocotyls when grown in the light, with aberrant vascular patterning, increased leaf serration, and reduced accumulation of auxin-inducible genes.
messages: Interacts with SKP1A/ASK1 and with MPK12.
messages: Nucleus
messages: Required for the transduction of auxin and abscisic acid (ABA) signaling pathways. Dephosphorylates and inactivates the MAP kinase MPK12.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G04400
gene id: 3702:AT1G04400
uniprot id: G4WTR2
uniprot id: Q96524
names: Biotechnology
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DNA photolyase class-1 family.
messages: Binds 1 5,10-methenyltetrahydrofolate (MTHF) per subunit.
messages: Binds 1 FAD per subunit.
messages: Binds 1 FAD per subunit. The flavin in the dark is in the oxidized (bright yellow) redox state, whereas it becomes reduced subsequent to light activation and formation of the neutral radical (pale yellow).
messages: Confers resistance to turnip crinkle virus (TCV) by preventing COP1-mediated proteasome-mediated degradation of RPP8/HRT, thus promoting its stability in light. Exposure to darkness or blue-light induces degradation of CRY2, and in turn of RPP8/HRT, resulting in susceptibility to TCV.
messages: Cytoplasm
messages: Daily oscillation of protein abundance in plants grown in short days (SD) but not in long days (LD) (PubMed:12578985). Expression levels display circadian oscillations under constant conditions, with a low amplitude and a late phase, with maximal expression around the end of the light phase. Repressed by light (PubMed:11743105). In response to blue light and darkness, phosphorylated, ubiquitinated, and subsequently degraded (at protein level) in a SPA proteins-dependent manner (PubMed:20624951, PubMed:25792146, PubMed:22739826, PubMed:22311776). Transcripts levels oscillate weakly and proportionally to temperature, but protein levels are stable (PubMed:23511208). Accumulates in response to low blue light (LBL) and in low light (PubMed:26724867, PubMed:20935177).
messages: Homodimer (PubMed:11089975, PubMed:11509693, PubMed:17438275, PubMed:27846570). Blue-light dependent dimerization (PubMed:27846570). Interacts with COP1 and PHYB in the nucleus (PubMed:11089975, PubMed:11509693, PubMed:17438275, PubMed:20624951). Binds reversibly to CIBs proteins such as BHLH63/CIB1, BHLH78/CIB2, BHLH74/CIB4 and BHLH76/CIB5 after blue light illumination to stimulate their transcription factor activities (PubMed:18988809, PubMed:22139370, PubMed:24130508, PubMed:24780222). Interacts with PIF4 and PIF5 in the nucleus in response to low blue light (LBL) (PubMed:26724867). Binds to SPA1 in response to blue light, this interaction prevents SPA1/COP1 complex formation but stimulates interaction with COP1, and thus avoid COP1-dependent degradation of the transcription factors CO and HY5 by the proteasome and promotes hypocotyl elongation and floral initiation (PubMed:21514160, PubMed:22139370, PubMed:21511872, PubMed:22739826). Binding to ATP mediates conformational changes which facilitate flavin binding (PubMed:17073458). Interacts with BIC1 in both darkness and light (PubMed:27846570, PubMed:11089975, PubMed:11509693, PubMed:17073458, PubMed:17438275, PubMed:18988809, PubMed:20624951, PubMed:21511872, PubMed:21514160, PubMed:22139370, PubMed:22739826, PubMed:24130508, PubMed:24780222, PubMed:26724867). Interacts with NRP (PubMed:28633330).
messages: Mostly expressed in the shoot meristems and root tips, and, to a lower extent, in the cotyledons, hypocotyls, and roots.
messages: Nucleus
messages: PML body
messages: Phosphorylated by CK1.3 and CK1.4; in response to blue light. Required for degradation (PubMed:12066190, PubMed:17438275, PubMed:17965271, PubMed:9651577, PubMed:25792146, PubMed:23897926). Adopts an open conformation when phosphorylated upon photoexcitation and thus interacts with signaling partner proteins (PubMed:21841916). Not autophosphorylated, even in complex with FAD cofactor (PubMed:17073458).
messages: Phosphorylation of the C-terminal tail and resulting derepression of NC80 domain may both depend on homodimerization.
messages: Photoreceptor that mediates primarily blue light inhibition of hypocotyl elongation and photoperiodic control of floral initiation, and regulates other light responses, including circadian rhythms, tropic growth, stomata opening, guard cell development, root development, bacterial and viral pathogen responses, abiotic stress responses, cell cycles, programmed cell death, apical dominance, fruit and ovule development, seed dormancy, and magnetoreception. Photoexcited cryptochromes interact with signaling partner proteins to alter gene expression at both transcriptional and post-translational levels and, consequently, regulate the corresponding metabolic and developmental programs (PubMed:21841916). Blue-light absorbing flavoprotein that activates reversible flavin photoreduction via an electron transport chain comprising a tryptophan triad (W-321, W-374 and W-397), or via an alternative electron transport that involves small metabolites, including NADPH, NADH, and ATP. The half-life of the activated signaling state is about 16 minutes (PubMed:25428980, PubMed:23398192). Perceives low blue light (LBL) and responds by directly contacting two bHLH transcription factors, PIF4 and PIF5, at chromatin on E-box variant 5'-CA[CT]GTG-3' to promote their activity and stimulate specific gene expression to adapt global physiology (e.g. hypocotyl elongation and hyponastic growth in low blue light) (PubMed:26724867, PubMed:19558423). In response to blue light, binds to CIB proteins (e.g. BHLH63/CIB1 and BHLH76/CIB5) to activates transcription and floral initiation (PubMed:24130508). Mediates blue light-induced gene expression, floral initiation and hypocotyl elongation through the interaction with SPA1 that prevents formation of SPA1/COP1 complex but stimulates COP1 binding, and thus inhibits COP1-mediated degradation of transcription factors (e.g. CO and HY5) (PubMed:21514160, PubMed:21511872, PubMed:16093319). Promotes flowering time in continuous light (LL) (PubMed:21296763). In…
messages: Plants show increased root elongation in blue light (PubMed:16703358, PubMed:21511872). Reduced attenuating effect of high fluence rates of blue light in the cry1 cry2 double mutant. Slow rate of curvature at low fluence rates of blue light in cry1 cry2 (PubMed:12857830). The double mutant cry1 cry2 exhibits a reduced impact of near-null magnetic field on flowering in lower blue light intensity and short days (PubMed:26095447). Little detectable phenotype on circadian clock in blue light (BL). The double mutant cry1 cry2 is impaired in blue light signaling, resulting in long-period, lower-amplitude oscillations at 12 and 17 degrees Celsius and completely abolishing rhythms at 27 degrees Celsius (PubMed:23511208). Reduced hyponastic growth (differential growth-driven upward leaf movement) in low blue light fluence (PubMed:19558423). The double mutant cry1 cry2 is hyposensitive to the strigolactone analog GR24 (PubMed:24126495). The mutant cry2 exposed to a background of red light show severely impaired stomatal opening responses to blue light. The double mutant cry1 cry2 has reduced stomatal conductance, transpiration, and photosynthesis, particularly under the high irradiance of full sunlight at midday, associated with elevated abscisic acid levels (PubMed:22147516). Mutation sel20 suppresses the inhibitory effect of continuous light (LL) on the hypocotyl elongation of elf3-1. The double mutant elf3 sel20 exhibits a late-flowering phenotype (PubMed:21296763). Impaired chromatin decondensation during the floral transition and in low light conditions (PubMed:20935177). Increased sensitivity to turnip crinkle virus (TCV) and associated with reduced HRT levels and stability, and characterized by hypersensitive response (HR) symptoms (PubMed:20624951).
messages: The NC80 domain (486-565) contains a major active site responsible for the signal transduction processes regulating both hypocotyl inhibition and floral promotion. The C-terminal tail (564-612) is not required for physiological activity of the protein.
messages: The rapid blue light-mediated reversible interaction between CRY2 and BHLH63/CIB1 is used to design an optogenetic control of target proteins or organelles.
messages: Ubiquitinated; in response to blue light.
messages: Was originally thought to be a DNA photolyase.

3702:AT4G25840
gene id: 3702:AT4G25840
uniprot id: F4JTE7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a glycerol-3-phosphatase with higher stereospecificity for L-glycerol-3-phosphate than DL-glycerol-3-phosphate (PubMed:17136424). Can also dephosphorylate in vitro 5-amino-6-(5-phospho-D-ribitylamino)uracil, also known as ARPP (PubMed:27490826).
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.
messages: Mitochondrion
messages: Ubiquitous with highest expression in siliques. Mainly restricted to the meristem of immature flower and vascular elements of the root, shoot, leave, siliqua and developing embryo (at the protein level).

3702:AT3G51260
gene id: 3702:AT3G51260
uniprot id: A0A178VPE4
uniprot id: P30186
uniprot id: Q2V3Q0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel. Interacts with KIN10 and KIN11 SnRK subunits, and with the SKP1A/ASK1 subunit of the SCF E3 ubiquitin ligase complex.
messages: Cytoplasm
messages: During cell proliferation.
messages: Expressed in roots, leaves and flowers.
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. Mediates the association of the SCF(TIR1) E3 ubiquitin ligase complex with the proteasome.

3702:AT5G22130
gene id: 3702:AT5G22130
uniprot id: A0A1P8BHL0
uniprot id: F4K8F7
uniprot id: Q0WVX1
uniprot id: Q500W7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PIGM family.
messages: Endoplasmic reticulum membrane
messages: Expressed in influorescence meristem. Present at low level in roots, hypocotyls, leaves and stems.
messages: Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN-acyl-PI during GPI precursor assembly.
messages: Membrane
messages: Plants display cell walls with decreased crystalline cellulose, increased pectins and irregular and ectopic deposition of pectins, xyloglucans and callose.

3702:AT5G15070
gene id: 3702:AT5G15070
uniprot id: A0A1P8BBK5
uniprot id: A0A1P8BBL1
uniprot id: A0A1P8BBN0
uniprot id: A0A7G2F7R8
uniprot id: A0A7G2F803
uniprot id: Q84WW3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the histidine acid phosphatase family. VIP1 subfamily.
messages: Bifunctional inositol kinase that acts in concert with the IP6K kinases to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, may regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, and exocytosis. Phosphorylates inositol hexakisphosphate (InsP6) at position 1 to produce PP-InsP5 which is in turn phosphorylated by IP6Ks to produce (PP)2-InsP4. Alternatively, phosphorylates PP-InsP5 at position 1, produced by IP6Ks from InsP6, to produce (PP)2-InsP4 (PubMed:25231822). Probably involved in vitamin E homeostasis via the regulation of gamma-tocopherol biosynthesis (By similarity).
messages: Bifunctional inositol kinase that acts in concert with the IP6K kinases to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, may regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, and exocytosis. Phosphorylates inositol hexakisphosphate (InsP6).
messages: Mostly expressed at low levels in roots and reproductive tissues (e.g. flowers and siliques), and, to a lower extent, in vegetative tissues (e.g. roots, shoots, leaves and stems) (PubMed:25231822). Also present in mature pollen (PubMed:25231822, PubMed:25901085).
messages: cytosol

3702:AT5G59200
gene id: 3702:AT5G59200
uniprot id: Q9FIF7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Involved in RNA editing event in chloroplasts. Required for the editing of a single site in rpl23 transcript.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT4G22230
gene id: 3702:AT4G22230
uniprot id: Q8L7G7
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: May be due to a competing acceptor splice site.
messages: Secreted

3702:AT1G49005
gene id: 3702:AT1G49005
uniprot id: A0A178W8Y5
uniprot id: Q3ECU1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed in seedlings, roots and siliques, and, to a lower extent, in leaves, flowers, stems and apex.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-94 enhances binding affinity of the CLE11p peptide for its receptor.
messages: extracellular space

3702:AT1G70760
gene id: 3702:AT1G70760
uniprot id: A0A178W3E4
uniprot id: Q9CAC5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDH complex subunit L family.
messages: Malfunction of the NDH complex.
messages: Membrane
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits. Component of the NDH subcomplex A, at least composed of ndhH, ndhI, ndhJ, ndhK, ndhL, ndhM, ndhN and ndhO.
messages: chloroplast thylakoid membrane

3702:AT1G64440
gene id: 3702:AT1G64440
uniprot id: A0A178W7Z8
uniprot id: Q9C7W7
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Catalyzes the interconversion between UDP-glucose and UDP-galactose. Involved in channeling UDP-D-galactose (UDP-D-Gal) into cell wall polymers. Required for the galactosylation of xyloglucan (XyG) and type II arabinogalactan (AGII). Cooperates with UGE2 in cell wall carbohydrate biosynthesis and growth.
messages: Cytoplasm
messages: Golgi stack
messages: Homodimer. Heterodimer.
messages: Inhibited by NaCl. Enhanced activity by NAD(+). Slightly inhibited by UDP.
messages: Root epidermal bulging. Partially deficient in cell wall arabinogalactan-protein (AGP). Abnormal trichoblast cell wall. Uge2 and uge4 double mutant displays a reduction in rosette and root growth, hypocotyl elongation, and secondary hypocotyl thickening (PubMed:17496119).
messages: Ubiquitous.

3702:AT5G44635
gene id: 3702:AT5G44635
uniprot id: A0A178UK72
uniprot id: A0A1P8BEG0
uniprot id: F4KAB8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.
messages: Belongs to the MCM family.
messages: Component of the MCM2-7 complex.
messages: Component of the minichromosome maintenance (MCM) complex, a heterotetramer composed of MCM2, MCM3, MCM4, MCM5, MCM6 and MCM7. Interacts with ETG1.
messages: Expressed in shoot apex and flower buds.
messages: Nucleus
messages: Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.

3702:AT5G63160
gene id: 3702:AT5G63160
uniprot id: Q9FMK7
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Interacts with CUL3A. Interacts with GTE9/BET9 and GTE11/BET10 through the BTB domain.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Also targeted for degradation by the 26S proteasome pathway. May be involved in gametophyte development.
messages: Nucleus
messages: Preferentially expressed in young leaves, roots and stems.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Up-regulated by auxin (IAA). Down-regulated by salicylic acid (SA) and hydrogen peroxide.

3702:AT5G26340
gene id: 3702:AT5G26340
uniprot id: A0A178UHA7
uniprot id: Q94AZ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Cell membrane
messages: Mediates an active uptake of hexoses, probably by sugar/hydrogen symport.
messages: Membrane

3702:AT4G23650
gene id: 3702:AT4G23650
uniprot id: Q42479
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Cytoplasm
messages: Expressed in both guard cells and mesophyll cells.
messages: Interacts with GHR1.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion- and Ca(2+)-permeable channels and stomatal closure.
messages: Nucleus
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (342-372) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT3G24513
gene id: 3702:AT3G24513
uniprot id: Q2V3S7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G38880
gene id: 3702:AT5G38880
uniprot id: Q9FMB4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAUS5 family.
messages: Involved in microtubules reorganization during spindle and phragmoplast development.
messages: Lethal when homozygous.
messages: Part of the augmin complex composed of 8 subunits. The complex acts on microtubules and interacts with gamma-tubulin in spindles and the phragmoplast.
messages: phragmoplast
messages: spindle

3702:AT5G24010
gene id: 3702:AT5G24010
uniprot id: Q9FLW0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT3G23840
gene id: 3702:AT3G23840
uniprot id: Q9LIS1
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant acyltransferase family.
messages: Highly expressed in flowers. Expressed in leaves.
messages: Involved in biosynthesis of the epicuticular wax. Plays a role in very-long-chain fatty acid (VLCFA) biosynthesis and is required for VLCFA elongation in leaf. Despite its classification as a BAHD acyltransferase based on sequence homology, CER26L does not seem to share the catalytic mechanism of the members of the BAHD family (By similarity).

3702:AT3G29050
gene id: 3702:AT3G29050
uniprot id: Q9LJW1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT3G58040
gene id: 3702:AT3G58040
uniprot id: A0A178VHN9
uniprot id: Q9M2P4
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:28351989, PubMed:32786047). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:28351989, PubMed:32786047). It probably triggers the ubiquitin-mediated degradation of different substrates (PubMed:28351989, PubMed:32786047). Mediates the proteasomal-dependent degradation of ATG6, a component of the autophagosome complex (PubMed:28351989). Requires TRAF1A/MUSE14 and TRAF1B/MUSE13 to target ATG6 for ubiquitination and subsequent regulation of autophagosome assembly (PubMed:28351989). Modulates directly the ubiquitination and proteasomal-dependent degradation of FREE1, a component of the ESCRT-I complex (PubMed:32786047, PubMed:32753431). Modulates directly the ubiquitination and proteasomal-dependent degradation of ELC/VPS23A, a component of the ESCRT-I complex (PubMed:32753431).
messages: Induced by drought stress, salt stress, osmotic shock and abscisic acid (ABA).
messages: Interacts with RAP2-2 (PubMed:17873090). Interacts with SINAT6 (PubMed:24350984). Interacts with ATG6 and TRAF1A (PubMed:28351989). Interacts with WAV3 (PubMed:22122664). Interacts with FREE1 (PubMed:32786047, PubMed:32753431). Interacts with ELC/VPS23A (PubMed:32753431).
messages: May be due to intron retention.
messages: No visible phenotype, may be due to the existence of 4 homologous proteins.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.
messages: autophagosome
messages: multivesicular body

3702:AT1G25230
gene id: 3702:AT1G25230
uniprot id: A0A178W1Q8
uniprot id: A0A1P8AQV6
uniprot id: C0Z3F1
uniprot id: Q8VYU7
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 iron ions per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G20010
gene id: 3702:AT5G20010
uniprot id: A0A178UC18
uniprot id: P41916
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Ran family.
messages: Found in a nuclear export complex with RanGTP, exportin and pre-miRNA (By similarity). Interacts with RANBP1A and RANBP1B (PubMed:9025305). Interacts with TRN1 (PubMed:14756317). Interacts with ATX1 (PubMed:17223078). Interacts with KPNB1 (PubMed:23582042). Binds to XPO1 (PubMed:10652141). Interacts with MOS14 (PubMed:21738492). Binds to NTF2B (PubMed:16428596).
messages: GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).
messages: GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle.
messages: Nucleus
messages: Regulated by light.

3702:AT3G56891
gene id: 3702:AT3G56891
uniprot id: B3H6D0
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT1G28360
gene id: 3702:AT1G28360
uniprot id: A0A178WCW0
uniprot id: Q94ID6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Contains a slightly degenerated ERF-associated amphiphilic repression (EAR) motif, which may be involved in the activity of transcriptional repression.
messages: Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity).
messages: Nucleus

3702:AT1G72416
gene id: 3702:AT1G72416
uniprot id: A0A178WL21
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G17550
gene id: 3702:AT4G17550
uniprot id: A0A178V1L1
uniprot id: O23596
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
messages: Membrane

3702:AT4G34540
gene id: 3702:AT4G34540
uniprot id: O65679
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NmrA-type oxidoreductase family. Isoflavone reductase subfamily.
messages: Dimer.
messages: Probable reductase that might be involved in the reduction of lariciresinol into secoisolariciresinol. In most plant species, a single enzyme is able to reduce both pinoresinol and lariciresinol efficiently while in Arabidopsis, PRR1 and PRR2 show a strict substrate selectivity for pinoresinol.

3702:AT3G16380
gene id: 3702:AT3G16380
uniprot id: O04319
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: A.thaliana contains 8 PABP genes.
messages: Belongs to the polyadenylate-binding protein type-1 family.
messages: Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation (By similarity).
messages: Cytoplasm
messages: Expressed at low levels in leaves and young seedlings.
messages: Lacks the PABC domain, which is one of the conserved features of the PAPB family.
messages: Nucleus

3702:AT5G24120
gene id: 3702:AT5G24120
uniprot id: A0A178URC9
uniprot id: Q9ZNX9
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sigma-70 factor family.
messages: Essential protein. Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites (e.g. psbA and psbD) and are then released. Essential for blue light-mediated transcription of psbD, which encodes the photosystem II reaction center protein D2. Plays a role in reproduction. Required during female gametophyte development (PubMed:21123745).
messages: Highly expressed in the male and female gametophytes and in seedlings.
messages: Induced by blue light illumination (470 nm), especially after dark adaptation. Induction is mediated through both cryptochrome 1 and cryptochrome 2 at lower light intensities and mainly through cryptochrome 1 at higher light intensities.
messages: Interacts with PIA2/ANK6 in mitochondrion.
messages: Lethal. In heterozygous plants, aborted embryos and unfertilized ovules. Defects in female gametophyte development at the one-nucleate stage and white shriveled ovule (PubMed:12805603, PubMed:14976253, PubMed:21123745). Loss of transcription activation of psbD in chloroplasts in response to light (PubMed:12805603, PubMed:14976253).
messages: Mitochondrion
messages: Mostly expressed in siliques and flowers, to a lesser extent in leaves and stems, and barely expressed in roots (at protein level). Isoform 2 accumulates specifically in flowers, whereas isoform 1 is expressed in both leaves and flowers. Present in old seedlings (8 days).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G60930
gene id: 3702:AT1G60930
uniprot id: Q9FT70
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 3'-5' DNA helicase that may play a role in the repair of DNA (By similarity). Required to promote but not to suppress crossovers.
messages: Belongs to the helicase family. RecQ subfamily.
messages: Mostly expressed in roots, seedlings, shoots, shoot apical mersitem, flowers, and siliques.
messages: Not mutagen-sensitive, and impaired in hyperrecombination (HR).
messages: Nucleus
messages: Repressed by cold.

3702:AT5G10510
gene id: 3702:AT5G10510
uniprot id: A0A1P8BDC1
uniprot id: A0A2H1ZE66
uniprot id: F4KGW7
uniprot id: F4KGW9
uniprot id: Q52QU2
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Detected in inflorescence and youg floral mersitems, and in stem procambial cells. In floral mersitems, mostly expressed in the central dome. Disappears progressively from sepal primordia, but accumulates in second, third and fourth whorl organ primordia. Later, confined to occasional patches in stamens and in petal before disparearing progressively from flowers.
messages: Expressed in roots, seedlings, hypocotyl, inflorescence, siliques, and pistils. Also detected at low levels in leaves.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

3702:AT3G52990
gene id: 3702:AT3G52990
uniprot id: A8MR07
uniprot id: Q94KE3
names: Similarity
messages: Belongs to the pyruvate kinase family.

3702:AT4G02630
gene id: 3702:AT4G02630
uniprot id: A0A178UZ74
uniprot id: O22764
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT4G16146
gene id: 3702:AT4G16146
uniprot id: F4JLP3
names: Similarity
messages: Belongs to the endosulfine family.

3702:AT1G60986
gene id: 3702:AT1G60986
uniprot id: A0A654EJT9
uniprot id: P82623
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Flower buds and roots.
messages: Secreted

3702:AT5G18000
gene id: 3702:AT5G18000
uniprot id: Q9FJG2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G12810
gene id: 3702:AT3G12810
uniprot id: Q7X9V2
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily.
messages: Component of the SWR1 chromatin-remodeling complex composed of at least ARP6/ESD1/SUF3, PIE1, SWC6, SWC2 and H2AZs (HTA8, HTA9, HTA11). Interacts (via c-terminus) with SWC6 and ARP6 and (via N-terminus) with H2AZs.
messages: Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling. Probable DNA-dependent ATPase. Not involved in the repression of FLC in gametophytes, but required for the reactivation of FLC in early embryos and for the maintenance of full activation of FLC in late embryos.
messages: Early flowering. Loss of H2A.Z from chromatin.
messages: Expressed in ovules, but not in stamens.
messages: Not regulated by vernalization.
messages: Nucleus

3702:AT4G13780
gene id: 3702:AT4G13780
uniprot id: Q9SVN5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: cytosol

3702:AT4G21150
gene id: 3702:AT4G21150
uniprot id: F4JIM7
uniprot id: Q93Z16
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SWP1 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Short pollen tube growth and failure to exit the style.
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT1G42680
gene id: 3702:AT1G42680
uniprot id: F4I9H4
names: Caution
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT2G47240
gene id: 3702:AT2G47240
uniprot id: A0A1P8B2B8
uniprot id: O22898
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Acts in both the wax and cutin pathways. Preferentially uses palmitate, palmitoleate, linoleate and eicosenoate. Seems to have a specific activity against very long-chain fatty acid (VLCFA) class with acids longer than 24 carbons (C(24)).
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.
messages: Endoplasmic reticulum
messages: Epidermal-specific expression along the entire stem. In cauline leaves, was expressed over the entire leaf surface, most strongly in trichomes and guard cells, but not in mesophyll cells. In flowers, the expression was detected in the stigma and filaments of the stamens, and in the carpel was expressed specifically in ovaries. In roots, was expressed in primary and lateral roots, but not in the root tips.
messages: In stem, fewer and flatter wax crystals and disorganized cuticle proper and thinner cuticular layer. Reduced amount of wax in all chemical classes on the stem and leaf, except in the very long-chain fatty acid (VLCFA) class with acids longer than 24 carbons (C(24)).

3702:AT3G13330
gene id: 3702:AT3G13330
uniprot id: A0A178VC52
uniprot id: F4JC97
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subunit
messages: Associated component of the proteasome that specifically recognizes acetylated histones and promotes ATP- and ubiquitin-independent degradation of core histones during DNA damage response. Recognizes and binds acetylated histones via its bromodomain-like (BRDL) region and activates the proteasome by opening the gated channel for substrate entry. Binds to the core proteasome via its C-terminus, which occupies the same binding sites as the proteasomal ATPases, opening the closed structure of the proteasome via an active gating mechanism. involved in DNA damage response: binds to acetylated histones and promotes degradation of histones (By similarity).
messages: Belongs to the BLM10 family.
messages: Interacts with the 26S proteasomes.
messages: No visible phenotype.
messages: The bromodomain-like (BRDL) region specifically recognizes and binds acetylated histones.
messages: Upon MG132 treatment.

3702:AT3G23620
gene id: 3702:AT3G23620
uniprot id: A0A178VDC5
uniprot id: Q9LUG5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RPF2 family.
messages: nucleolus

3702:AT5G15090
gene id: 3702:AT5G15090
uniprot id: Q9SMX3
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.
messages: Cell membrane
messages: Consists mainly of membrane-spanning sided beta-sheets.
messages: Expressed in leaf tips, anthers and stigma.
messages: Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity).
messages: Induced during the hypersensitive response to X.campestris pv campestris and by the bacterial pathogen P.syringae pv. tomato.
messages: Interacts with KIN14F/KP1 (PubMed:21406623). Interacts with FBA6 and GAPC1 (PubMed:23316205).
messages: Mitochondrion outer membrane
messages: No visible phenotype under normal growth conditions.

3702:AT5G51760
gene id: 3702:AT5G51760
uniprot id: A0A1P8BDH5
uniprot id: A0A654GAC6
uniprot id: Q9FLI3
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: By ABA.
messages: During germination, expressed in the embryo, vascular bundles and the root cap. In 6-day-old seedlings, expression in seed coat/endosperm disappears is detected only at the bases of the lateral root buds. Expressed in developing an mature siliques from 10 to 16 days after flowering (DAF).
messages: Hypersensitivity to ABA, salt and sucrose during seed germination.
messages: Negative regulator of abscisic acid (ABA) responses during seed germination.

3702:AT5G52250
gene id: 3702:AT5G52250
uniprot id: Q9LTJ6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Circadian-regulation. Expression increases during the dark phase with a peak at the beginning of the light phase and then decreases to reach the lowest expression at the end of the light phase. Induced by UV-B.
messages: Functions in association with RUP2 as repressor of UV-B-induced photomorphogenesis mediated by UVR8 and HY5, likely in coordination with DHU1 (PubMed:28735869). Plays a crucial negative feedback regulatory role downstream of UVR8-COP1 to inhibit UVR8 function, balance UV-B-specific responses and ensure normal plant growth. Is involved in the regulation of photoperiodic flowering and vegetative development.
messages: Interacts with UVR8 (PubMed:21041653, PubMed:22988111). Interacts directly with DHU1 (PubMed:28735869).
messages: No visible phenotype under normal growth conditions (PubMed:21242318). The UV-B responsiveness of the double mutant dhu1-1 rup1-1 is similar to that of the single mutants dhu1-1 and rup1-1 (PubMed:28735869).
messages: Nucleus
messages: Overexpression of RUP1 confers an early flowering phenotype.
messages: cytosol

3702:AT4G12570
gene id: 3702:AT4G12570
uniprot id: Q9SU29
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accelerated senescence.
messages: Belongs to the UPL family.
messages: By jasmonate. Down-regulated by hydrogen peroxide.
messages: Cytoplasm
messages: E3 ubiquitin protein ligase that regulates leaf senescence through ubiquitination and subsequent degradation of WRKY53.
messages: Interacts with WRKY53.

3702:AT4G32980
gene id: 3702:AT4G32980
uniprot id: A0A654FVB6
uniprot id: P48731
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/BELL homeobox family.
messages: By light. In etiolated seedlings, maximally expressed after 3 days of illumination.
messages: Down-regulated in the shoot apical meristem (SAM) upon floral induction.
messages: May form heterodimeric complex with the TALE/KNOX protein STM.
messages: Most abundant in flowers.
messages: Nucleus
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.
messages: Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM).

3702:AT5G42450
gene id: 3702:AT5G42450
uniprot id: Q9FIH2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT1G49730
gene id: 3702:AT1G49730
uniprot id: Q9FX99
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT5G44150
gene id: 3702:AT5G44150
uniprot id: A0A178UQS0
uniprot id: F4K8S5
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Endoplasmic reticulum
messages: Expressed in taproots, lateral roots, root tips, leaf veins, cauline leaves, inflorescences, flowers, and siliques.
messages: Interacts with RST1.
messages: Shrunken non viable seeds due to arrested embryo development when homozygous (PubMed:31455787). Alteration in cuticular waxes (PubMed:31455787, PubMed:31941670). Decreased production wax with dramatically fewer alkanes (PubMed:31941670).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Together with RST1, acts as cofactor of the cytoplasmic exosome and connects the cytosolic RNA exosome to the SKI complex (PubMed:31455787). Acts as post-transcriptional gene silencing (PTGS) suppressor (PubMed:31455787, PubMed:31941670). CER16/RIPR can, like RST1 suppress the production of small interfering RNAs (siRNAs) from the CER3 locus, which is involved in cuticule membrane and wax production, and in the typhine and sporopollenin biosynthesis of pollen (PubMed:31455787, PubMed:31941670).
messages: cytosol

3702:AT3G60020
gene id: 3702:AT3G60020
uniprot id: A0A178VPE2
uniprot id: Q9M1X4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: In young buds, confined to sepals and pedicels.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with PP2A13.
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.
messages: Restricted to inflorescences, especially in the inflorescence meristem (IM).

3702:AT3G17060
gene id: 3702:AT3G17060
uniprot id: Q9LSP1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in flower buds.
messages: cell wall

3702:AT2G20463
gene id: 3702:AT2G20463
uniprot id: A0A178VYH8
uniprot id: Q2V476
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G33475
gene id: 3702:AT1G33475
uniprot id: A0A178WEZ1
uniprot id: Q84WF5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the synaptobrevin family.
messages: Membrane
messages: Non-SNARE longin protein involved in membrane-trafficking machinery.

3702:AT2G26890
gene id: 3702:AT2G26890
uniprot id: F4IVL6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 'Katamari' means 'aggregate' in Japanese.
messages: Constitutively expressed in roots, hypocotyls, leaves (e.g. vascular tissues), stems, flowers (e.g. petals and stigmas), siliques and pollen.
messages: Endosome membrane
messages: Expressed at the early to middle stages of seed maturation.
messages: Reduced shoot phototropism and gravitropism, and impaired embryo growth axis (e.g. between the late torpedo-shaped embryo stage and the walking stick-shaped embryo stage). Abnormal amyloplasts position and sedimentation in endodermal cells. Defect in the organization of endomembranes characterized by aggregated endomembrane structures accompanied by a missorting of storage proteins.
messages: Required for endosome formation, vacuolar protein sorting and determination of the embryo growth axis. Necessary for the transport of proteins into protein storage vacuoles (PSVs). Participates in vesicle trafficking from the endosome to the central vacuole. Involved in the regulation of shoot phototropism and gravitropism, probably through the positioning of specialized amyloplasts (statoliths) in endodermal cells.

3702:AT3G26540
gene id: 3702:AT3G26540
uniprot id: Q9LRV2
names: Similarity
messages: Belongs to the PPR family. PCMP-A subfamily.

3702:AT1G68830
gene id: 3702:AT1G68830
uniprot id: Q9S713
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Phosphorylated.
messages: Serine/threonine protein kinase required for state transition by phosphorylating light-harvesting complex II outer antennae (LCHII). State transition plays a central role in response to environmental changes and allows to adjust to changing light conditions via the redistribution of light excitation energy between photosystem II (PSII) and photosystem I (PSI). Phosphorylates the minor light harvesting protein LHCB4.2/CP29 and is involved in the light-dependent phosphorylation of TSP9. Acts as a key component of the long-term response (LTR) signaling pathway. Mediates phosphorylation-dependent PTAC16 subcellular localization to regulate plastid gene expression (PubMed:22616989).
messages: chloroplast thylakoid membrane

3702:AT4G36160
gene id: 3702:AT4G36160
uniprot id: O65508
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant vascular related NAC-domain protein family.
messages: Detected in root protoxylem and metaxylem poles and in vessels of protoxylems, outermost metaxylems, inner metaxylems, shoots and hypocotyls (PubMed:18445131). Expressed in roots, hypocotyls, cotyledons and leaves. Present in developing xylems (PubMed:16103214, PubMed:16581911). Specifically expressed in vessels but not in interfascicular fibers in stems (PubMed:25148240).
messages: Interacts with NAC030/VND7.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:25148240).
messages: Up-regulated during xylem vessel element formation. Expressed preferentially in procambial cells adjacent to root meristem.

3702:AT2G36210
gene id: 3702:AT2G36210
uniprot id: A0A178VXK7
uniprot id: Q8L8B9
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT1G51590
gene id: 3702:AT1G51590
uniprot id: A0A178W2E7
uniprot id: Q9C512
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 47 family.
messages: Ca(2+) or Mn(2+). Mg(2+) can be used to a lesser extent.
messages: Class I alpha-mannosidase essential for early N-glycan processing. Progressively trims alpha-1,2-linked mannose residues. Produces Man(5)GlcNAc(2) from Man(8)GlcNAc(2), but only Man(6)GlcNAc(2) from Man(9)GlcNAc(2). Has difficulty acting on the terminal mannose of the b-branch. Involved in root development and cell wall biosynthesis.
messages: Expressed in flowers, siliques, stems, leaves, roots, pollen grains, shoot apical meristems, hypocotyls and upper region of the root.
messages: Golgi apparatus membrane
messages: Inhibited by kifunensine and 1-deoxymannojirimycin, but not by swainsonine.
messages: No visible phenotype; due the redundancy with MNS2. Lack of complex N-glycans, shorter roots and increased lateral root formation in mns1 and mns2 double mutants.

3702:AT2G41500
gene id: 3702:AT2G41500
uniprot id: O22212
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: During female gametophyte development, preferentially expressed in the gametic cells.
messages: Gametophytic lethality due to female gametophyte defect, when homozygous.
messages: Nucleus speckle
messages: Participates in pre-mRNA splicing. Part of the U4/U5/U6 tri-snRNP complex, one of the building blocks of the spliceosome (By similarity). Essential for reproduction. In female gametophyte, is necessary for the egg cell and central cell fate determination and hence reproductive success. Involved in a mechanism that prevents accessory cells from adopting gametic cell fate (PubMed:17326723). Modulates egg cell signaling center that regulates the development of all female gametophytic cells (PubMed:22190635).

3702:AT1G69450
gene id: 3702:AT1G69450
uniprot id: A0A097NUQ3
uniprot id: A0A1P8AP05
uniprot id: A0A384KS87
uniprot id: F4I248
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as an osmosensitive calcium-permeable cation channel.
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Membrane

3702:AT4G01370
gene id: 3702:AT4G01370
uniprot id: Q39024
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by threonine and tyrosine phosphorylation. Activated by the MAP kinase kinases MKK1 and MKK2. Activated in response to touch, wounding, low temperature, low humidity, salt stress and the bacterial elicitors flagellin and harpin. Activated upon Pseudomonas syringae pv. tomato DC3000 infection. Repressed by the protein phosphatase 2C AP2C1. Repressed by DSPTP1-mediated dephosphorylation. Activated by the MAP kinase kinase MKK6 in vitro.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Cytoplasm
messages: Dually phosphorylated on Thr-201 and Tyr-203, which activates the enzyme. Autophosphorylated on serine and tyrosine residues. Dephosphorylated by DSPTP1. Phosphorylated by MKK6 in vitro.
messages: Dwarf plants with cytokinetic defects in leaf epidermal cells. Abnormally developed and branched root hairs. Retarded root growth with the protrusion of many epidermal cells from roots. Heavily bundled and disoriented cortical microtubules resistant to oryzalin. Exhibits a seedling-lethality phenotype. Defects in the formation of the cell plate. Abnormal mature pollen grains. Abolished CO(2)-mediated stomatal closure (PubMed:27694184).
messages: Interacts with MEKK1, MKK1, MKK2 and MKK6. May form a ternary complex composed of MEKK1 and MKK1/MKK2 and MPK4. Interacts with MKS1 and AP2C1. May form a ternary or larger complex with MKS1 and WRKY25 and/or WRKY33. Interacts with MAP65-1 (PubMed:15225555, PubMed:15990873, PubMed:17630279, PubMed:18982020, PubMed:19513235, PubMed:20215588, PubMed:20802223, PubMed:21575092, PubMed:9878570). No interactions with RACK1A, RACK1B or RACK1C (PubMed:25731164). Interacts directly with ASR3 and mediates its phosphorylation (PubMed:25770109). Binds to MEKK2 (PubMed:22643122). Interacts with PAT1 (PubMed:25603932). Binds to HT1 (PubMed:27694184).
messages: Nucleus
messages: Observed in root epidermal cells and root hairs, especially in the root hair formation zone. During root hair development, both observed in root hair bulges and in young outgrowing root hairs.
messages: The ANPs-MKK6-MPK4 module is involved in the regulation of plant cytokinesis during meiosis and mitosis. Essential to promote the progression of cytokinesis and for cellularization (formation of the cell plate) during male-specific meiosis. Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1. Involved in root hair development process. Negative regulator of systemic acquired resistance (SAR) and salicylic acid- (SA) mediated defense response. Required for jasmonic acid- (JA) mediated defense gene expression. May regulate activity of transcription factor controlling pathogenesis-related (PR) gene expression. Seems to act independently of the SAR regulatory protein NPR1 (Nonexpresser of PR1). Phosphorylates MKS1 and transcription factors WRKY25 and WRKY33. The MEKK1, MKK1/MKK2 and MPK4 function in a signaling pathway that modulates the expression of genes responding to biotic and abiotic stresses and also plays an important role in pathogen defense by negatively regulating innate immunity (PubMed:11163186, PubMed:15225555, PubMed:15358537, PubMed:15990873, PubMed:18982020, PubMed:20215588, PubMed:20802223, PubMed:21098735, PubMed:21575092, PubMed:25770109). Phosphorylates MEKK2 upon treatment with flg22 (PubMed:22643122). Involved in stomatal movement regulation by repressing HT1 and HT1-mediated GHR1 phosphorylation (PubMed:27694184, PubMed:27923039).
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.
messages: Ubiquitous. Expressed in the veins and stomatal guard cells of leaf plates, petioles, stem, roots and flowers.
messages: cytoskeleton

3702:AT1G08620
gene id: 3702:AT1G08620
uniprot id: A0A1P8AMS3
uniprot id: A0A654E8Z6
uniprot id: A0A7G2DRN2
uniprot id: C0SUT9
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Confined to inflorescences.
messages: Fades out gradually during aging.
messages: Functions as histone H3 'Lys-4' (H3K4me) demethylase involved in the negative regulation of gene expression (PubMed:30712008, PubMed:32572214). Active on H3K4me1, H3K4me2 and H3K4me3 (PubMed:30712008, PubMed:32572214). Not active on mono-, di- and trimethylated H3K9, H3K27 and H3K36 in somatic cells (PubMed:30712008, PubMed:32572214). However, also active on H3K9 when in complex with MMD1, a meiocyte-specific histone reader (PubMed:32572214). Together with MMD1, promotes gene expression in male meiocytes in an H3K9me3-dependent manner, and contributes to meiotic chromosome condensation by triggering some condensin promoters (e.g. CAP-D3 and CAP-H) (PubMed:32572214). Together with JMJ14 and JMJ17, required for plant growth and development (PubMed:31038749). Represses leaf senescence in an age-dependent manner by demethylating H3K4me3 activating histone marks at senescence-associated genes (SAGs) loci, including WRKY53 and SAG201, thus preventing their premature expression (PubMed:30712008).
messages: Interacts with MMD1 in the nucleus of male meiocytes, especially on pachytene chromosomes.
messages: No visible phenotype under normal growth conditions (PubMed:20202164). Abnormal accumulation of reactive oxygen species (ROS) (PubMed:30712008). Hypermethylation of histone H3 'Lys-4' (H3K4me3) (PubMed:30712008, PubMed:32572214). Enhanced expression of genes involved in leaf senescence (e.g. WRKY53 and SAG201) associated with H3K4me3 leading to an early leaf senescence phenotype (PubMed:30712008, PubMed:32572214). Partial sterility with abnormally short siliques and dead pollen grains leading to silique abortion (PubMed:30712008, PubMed:32572214). Male meiocytes are defective in meiotic chromosome condensation (PubMed:32572214). Slightly early flowering (PubMed:30712008). Increased H3K9me3 levels specifically in male meiocytes leading to greater number of down-regulated than up-regulated genes (PubMed:32572214). The double mutant jmj17-1 jmj16-1 has an early flowering phenotype (especially in long day conditions) (PubMed:31038749).
messages: Nucleus

3702:AT1G55810
gene id: 3702:AT1G55810
uniprot id: A0A1P8AWK0
uniprot id: A0A1P8AWM1
uniprot id: Q8VYB2
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
messages: Allosterically activated by GTP.
messages: Belongs to the uridine kinase family.
messages: Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.
messages: In the C-terminal section; belongs to the UPRTase family.
messages: In the N-terminal section; belongs to the uridine kinase family.
messages: Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure.
messages: No visible phenotype. No decrease in uracil phosphoribosyltransferase activity.

3702:AT2G18140
gene id: 3702:AT2G18140
uniprot id: Q9SI17
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT5G51600
gene id: 3702:AT5G51600
uniprot id: A0A178UES8
uniprot id: Q9FHM4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MAP65/ASE1 family.
messages: Cytoplasm
messages: Expressed in all tissues enriched in dividing cells, such as the root and shoot apical meristem, foliar primordia, and young leaves, and embryos.
messages: Forms a dimer (By similarity). Binds to microtubules (MT) during cell division. Bundles polymerized MT via the formation of 25-nm crossbridges with centrally located endocytic MT, and midline phragmoplast MT.
messages: Irregular root expansion. Defects in karyokinesis and cytokinesis. Cytokinesis defects before the embryo dermatogen stage and in roots. Embryos with enlarged nuclei, often containing multiple nucleoli. Some abnormal stomata with pores attached to a single side of the mother cell. Long root hairs. In roots, multinucleated cells, cell wall stubs, and synchronized cell divisions in incompletely separated cells. Normal anaphase spindle, but distorted phragmoplast. Abnormal formation of nematode-mediated giant cells leading to impaired maturation of nematode larvae.
messages: Microtubule-associated protein that plays a critical role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs. Essential for the cytokinesis, especially in roots, by maintaining the integrity of the overlapped microtubules in the phragmoplast. Required during root morphogenesis. Needed for giant cell development during root knot nematode infection, where cytokinesis is initiated but not completed.
messages: Nucleus
messages: Present in dividing tissues during all stages of embryonic development.
messages: phragmoplast

3702:AT5G25580
gene id: 3702:AT5G25580
uniprot id: A0A178UG69
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26340
gene id: 3702:AT3G26340
uniprot id: A0A178VFG8
uniprot id: Q9LIP2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1B family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.

3702:AT5G26860
gene id: 3702:AT5G26860
uniprot id: A0A2H1ZE77
uniprot id: A0A654G4C9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: Homohexamer or homoheptamer. Organized in a ring with a central cavity.
messages: Mitochondrion matrix

3702:AT5G63140
gene id: 3702:AT5G63140
uniprot id: Q9FMK9
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted

3702:AT5G54080
gene id: 3702:AT5G54080
uniprot id: Q9ZRA2
names: Similarity
messages: Belongs to the homogentisate dioxygenase family.

3702:AT5G65730
gene id: 3702:AT5G65730
uniprot id: Q0WUU2
uniprot id: Q8LF99
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT4G01850
gene id: 3702:AT4G01850
uniprot id: A0A178V3V9
uniprot id: P17562
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate (By similarity).
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate (By similarity). Can utilize magnesium, manganese or cobalt (in vitro) (By similarity).
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.
messages: Cytoplasm
messages: Highly expressed in stems and roots (PubMed:2482229). Detected in trichomes (at the protein level) (PubMed:15276459).
messages: Homotetramer (By similarity). Interacts with GRF3.
messages: Inhibited by 5,5'-dithiobis-2-nitrobenzoic acid (DTNB) and N-ethylmaleimide (NEM) (in vitro).

3702:AT1G58350
gene id: 3702:AT1G58350
uniprot id: A0A654EL18
uniprot id: F4IBC0
uniprot id: Q9SLU9
names: Similarity
messages: Belongs to the FAM135 family.

3702:AT3G47930
gene id: 3702:AT3G47930
uniprot id: Q9SU56
names: Cofactor
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Binds FAD non-covalently.
messages: Delayed germination, chlorotic cotyledons and death at the cotyledon stage.
messages: Involved in the biosynthesis of ascorbate (PubMed:18190525). Catalyzes the final step of ascorbate biosynthesis (PubMed:18190525). Uses L-galactono-1,4-lactone and L-gulono-1,4-lactone as substrates, but not D-galactono-1,4-lactone, D-gulono-1,4-lactone, L-mannono-1,4-lactone or D-galactonic acid (PubMed:18190525). Also active with phenazine methosulfate and 1,4-benzoquinone as electron acceptors (PubMed:18190525). Involved in the regulation of the accumulation of the mitochondrial respiratory complex I (PubMed:18799460, PubMed:33060577). Structural part of one of the plant-specific mitochondrial complex I assembly intermediates, lacking the whole distal (PD) module (PubMed:33060577). Prevents the binding of the plant specific P1 protein (CPN60/HSP60), responsible for the linkage of the proximal (PP) to the distal (PD) module (PubMed:33060577).
messages: Mitochondrion membrane

3702:AT5G11020
gene id: 3702:AT5G11020
uniprot id: A0A1P8BBK3
uniprot id: A0A1P8BBK9
uniprot id: A0A1P8BBL4
uniprot id: A0A654G040
uniprot id: F4JWD4
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G09490
gene id: 3702:AT5G09490
uniprot id: A0A384L6V7
uniprot id: Q1PDY1
uniprot id: Q9FY66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Cytoplasm

3702:AT1G28120
gene id: 3702:AT1G28120
uniprot id: Q8LG98
names: Activity Regulation
names: Function
names: Similarity
messages: Belongs to the peptidase C65 family.
messages: Cleavage activities for 'Lys-48'- and 'Lys-63'-linked ubiquitin (UB) tetramers is inhibited by UB aldehyde and N-ethylmaleimide but not by the metalloprotease inhibitors 1,10-phenanthroline and EDTA, and the serine protease inhibitor phenylmethylsulfonyl fluoride.
messages: Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (PubMed:24659992). Cysteine protease with a preference for Met-1 and 'Lys-48' over 'Lys-63'-linked ubiquitin (UB) tetramers (e.g. Ub2, Ub3 and Ub4) as substrates (PubMed:24659992).

3702:AT5G22900
gene id: 3702:AT5G22900
uniprot id: Q9FFB8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane

3702:AT5G22790
gene id: 3702:AT5G22790
uniprot id: A0A178UC54
uniprot id: Q9FGP9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RETICULATA family.
messages: Expressed in root vasculature, distal region of young leaf primordia, leaf bundle sheath cells, hydathodes and pollen grains.
messages: May play a role in leaf development.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast membrane

3702:AT4G27880
gene id: 3702:AT4G27880
uniprot id: A0A384KY39
uniprot id: B3LF90
uniprot id: Q9STN8
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:32786047). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:32786047). It probably triggers the ubiquitin-mediated degradation of different substrates (PubMed:32786047). Modulates directly the ubiquitination and proteasomal-dependent degradation of FREE1, a component of the ESCRT-I complex (PubMed:32786047, PubMed:32753431). Modulates directly the ubiquitination and proteasomal-dependent degradation of ELC/VPS23A, a component of the ESCRT-I complex (PubMed:32753431).
messages: Induced by drought stress, salt stress, osmotic shock and abscisic acid (ABA).
messages: Interacts with SINAT6 (PubMed:24350984). Interacts with WAV3 (PubMed:22122664). Interacts with FREE1 (PubMed:32786047, PubMed:32753431). Interacts with ELC/VPS23A (PubMed:32753431).
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.
messages: autophagosome
messages: multivesicular body

3702:AT1G77080
gene id: 3702:AT1G77080
uniprot id: A0A1P8ARA3
uniprot id: A0A1P8ARA9
uniprot id: A0A1P8ARE3
uniprot id: A0A654ER95
uniprot id: Q9AT76
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in most plant tissues, embryo, seedlings, roots, leaves, stems, inflorescence, pollen, siliques and flowers.
messages: Interacts with AGL39, AGL97 and AGL74.
messages: Nucleus
messages: Probable transcription factor involved in the negative regulation of flowering time in both long and short days, probably through the photoperiodic and vernalization pathways. Prevents premature flowering.
messages: Slightly repressed by vernalization. Negatively regulated at the chromatin level by VIL1 through the photoperiod and vernalization pathways. Requires EARLY FLOWERING 7 (ELF7) and ELF8 to be expressed. Up-regulated by HUA2.
messages: Suppress the late-flowering phenotype of photoperiod-pathway mutants. Affects natural variation in flowering behavior in both long and short days.
messages: The early flowering of cv. Nd-1 (especially in short days) is due to a deletion of AGL27. This deletion is associated with the QTL 'FLOWERING 1' (FLW1) (PubMed:15695584).

3702:AT3G10690
gene id: 3702:AT3G10690
uniprot id: A0A178VFU0
uniprot id: Q9CAF6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.
messages: Belongs to the type II topoisomerase GyrA/ParC subunit family.
messages: Made up of two chains. The A chain is responsible for DNA breakage and rejoining; the B chain catalyzes ATP hydrolysis (By similarity). Associated with the mediator complex.
messages: Mitochondrion
messages: Nucleus
messages: chloroplast

3702:AT4G04490
gene id: 3702:AT4G04490
uniprot id: Q9XEC6
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: By ozone and light stress (PubMed:20500828). Induced by salt stress, drought stress and abscisic acid (ABA) (PubMed:22225700).
messages: Cell membrane
messages: Forms a complex with CRK45 that may negatively control abscisic acid (ABA) and osmotic stress signal transduction. Can phosphorylate CRK45 in vitro (PubMed:22225700).
messages: Interacts with CRK45.
messages: Seedlings silencing CRK36 show increased sensitivity to abscisic acid (ABA) and salt stress during post-germinative growth.

3702:AT5G21950
gene id: 3702:AT5G21950
uniprot id: A0A384LGU9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G14835
gene id: 3702:AT2G14835
uniprot id: Q944Q6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZFPL1 family.
messages: Membrane

3702:AT1G10630
gene id: 3702:AT1G10630
uniprot id: A0A384LQJ7
uniprot id: Q6ID97
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Arf family.
messages: GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.
messages: Golgi apparatus

3702:AT3G23090
gene id: 3702:AT3G23090
uniprot id: A0A1I9LQY2
uniprot id: A0A1I9LQY3
uniprot id: A0A1I9LQY4
uniprot id: A0A654FB52
uniprot id: F4J2V3
uniprot id: Q84WL6
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPX2 family.
messages: By light (at protein level). Down-regulated by dark (at protein level).
messages: Expressed in roots, root hairs, cotyledons, hypocotyls, trichomes, flowers and siliques.
messages: Microtubule-associated protein (MAP) that regulates the orientation of interphase cortical microtubules. Binds to, bundles and stabilizes microtubules. Required for the organization and stability of cortical microtubules in hypocotyls. Required for normal hypocotyl cell elongation. Acts as negative regulator of hypocotyl cell elongation in the light.
messages: Ubiquitinated (Probable). Proteasomal-dependent degradation in the dark (PubMed:23653471).
messages: cytoskeleton

3702:AT1G50930
gene id: 3702:AT1G50930
uniprot id: Q9C6I7
names: Function
names: Miscellaneous
messages: Involved in the regulation of plant growth.
messages: Plants overexpressing VUP2 exhibit severe dwarfism.

3702:AT2G37320
gene id: 3702:AT2G37320
uniprot id: Q9ZUT4
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT3G48860
gene id: 3702:AT3G48860
uniprot id: Q8RWD5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Defects in seedling development, root elongation, leaf expansion, flower morphogenesis and fertility due to defective cytokinesis in epidermal cells.
messages: Expressed in the mature region of the primary root, tips of short, young lateral roots, guard cells in the epidermis of cotyledons and rosette leaves, the socket cells surrounding the base of trichomes and hydathodes of fully expanded rosette leaves.
messages: Involved in growth and development through its role in cytokinesis and polarized cell expansion. Required for plasma membrane internalization. May function in clathrin-mediated membrane trafficking, including plasma membrane endocytosis, essential to both cytokinesis and cell expansion.
messages: clathrin-coated vesicle

3702:AT5G43280
gene id: 3702:AT5G43280
uniprot id: A0A5S9YB50
uniprot id: Q9FHR8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Converts 3,5-dienoyl-CoAs to the corresponding 2,4-dienoyl-CoAs. Involved in degradation of unsaturated fatty acids.
messages: Expressed in roots, leaves, stems and flowers.
messages: Peroxisome

3702:AT5G04690
gene id: 3702:AT5G04690
uniprot id: A0A1P8BCP0
uniprot id: A0A1P8BCP7
uniprot id: A0A654FYH3
uniprot id: Q9LZ28
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G32950
gene id: 3702:AT4G32950
uniprot id: O82637
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT2G33255
gene id: 3702:AT2G33255
uniprot id: Q8RYE9
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.

3702:AT5G45400
gene id: 3702:AT5G45400
uniprot id: A0A654G8I4
uniprot id: Q9FHJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the replication factor A protein 1 family.
messages: Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (By similarity).
messages: Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
messages: Heterotrimer of RPA1, RPA2 and RPA3 (canonical replication protein A complex).
messages: Nucleus

3702:AT5G08000
gene id: 3702:AT5G08000
uniprot id: Q9SD84
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Able to bind (1->3)-beta-D-glucans (laminarin).
messages: Cell membrane
messages: Contains two additional disulfide bonds.
messages: Down-regulated by heat treatment.
messages: Expressed in the shoot apical region and in young leaves but also detected in the laminar and vasculature of mature leaves.
messages: plasmodesma

3702:AT3G55210
gene id: 3702:AT3G55210
uniprot id: A0A384KY99
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G69935
gene id: 3702:AT1G69935
uniprot id: F4I3V6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in young seedlings (e.g. hypocotyl and cotyledons) and in green tissues (e.g. leaves, stems, sepals, and young siliques).
messages: In seedlings, expressed in hypocotyl and cotyledons up to the fifth day after germination. Levels decrease gradually in hypocotyl to become undetectable in 8 days old seedlings. In cotyledons, repartition becomes later patchy. In adult plants, observed in green tissues, with a gradual decrease during aging leading to patchy distribution. Also detected in seeds still partly green but disappear in dry seeds.
messages: Induced by white light (WL). Barely detectable in dark and in various wavelengths of light such as red light (RL), far red light (FR), and blue light (BL).
messages: Interacts with HY5 and COP1 in the nucleus.
messages: Negative regulator of photomorphogenesis modulating both light and abscisic acid (ABA) signaling pathways (PubMed:19704523, PubMed:18375596, PubMed:26474641). Regulates negatively the light-mediated inhibition of hypocotyl elongation, probably in a PHYB-mediated signaling pathway, but promotes flowering time (especially in long days) and lateral root formation (PubMed:18375596, PubMed:19704523). Enhances light-regulated gene expression (PubMed:18375596). Promotes COP1-mediated degradation of HY5 during seedling development (e.g. hypocotyl growth) through enhanced ubiquitination in the darkness. Also involved in root gravitropism (PubMed:26474641, PubMed:18375596).
messages: Nucleus membrane
messages: Short hypocotyl in dark with drastic reduction in apical hook curvature. Enhanced inhibition in hypocotyl elongation in white light (WL), especially at lower fluence rates (PubMed:18375596, PubMed:26474641). Delayed flowering under long-day conditions (PubMed:18375596). Reduced lateral roots formation (PubMed:18375596, PubMed:26474641). Reduced chlorophyll accumulation and expression of light-regulated genes. Increase in the anthocyanin level in the dark (PubMed:18375596). Reduced sensitivity to abscisic acid (ABA) leading to impaired ABA-mediated reduction of seed germination (PubMed:19704523, PubMed:26474641). The double mutant shw1 phyB exhibits a strongly reduced hypocotyl length in WL (PubMed:19704523). The double mutant shw1 cop1 displays an enhanced photomorphogenic growth in the darkness as well as abnormal accumulation of HY5 (PubMed:26474641, PubMed:18375596). The double mutant shw1 hy5 has altered root growth, hypocotyl length and hook angle similar to the single mutant shw1 in the darkness and far red light (FR), but shorter hypocotyl in WL, red light (RL) and blue light (BL). In addition, shw1 hy5 is recued for gravitropic root growth defect observed in hy5 single mutant (PubMed:26474641).

3702:AT5G36940
gene id: 3702:AT5G36940
uniprot id: Q8GYB4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Expressed in roots, stems, flowers, and leaves.
messages: Mitochondrion membrane
messages: Permease involved in the transport of the cationic neutral or acidic amino acids.

3702:AT5G07290
gene id: 3702:AT5G07290
uniprot id: Q9LYN7
names: Developmental Stage
names: Disruption Phenotype
names: Function
messages: Early flowering.
messages: Expressed throughout the meristem during embryonic and vegetative development. Expressed in floral organogenic regions.
messages: Probable RNA-binding protein that plays a role in meiosis and vegetative growth.

3702:AT2G21290
gene id: 3702:AT2G21290
uniprot id: A0A178VPU6
uniprot id: Q9SJU8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bTHX family.
messages: Component of the mitochondrial ribosome small subunit.
messages: Mitochondrion

3702:AT1G06110
gene id: 3702:AT1G06110
uniprot id: Q9LND7
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1, SKP1B/ASK2, ASK4, ASK11 and ASK13.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G03940
gene id: 3702:AT5G03940
uniprot id: A0A178UD49
uniprot id: P37107
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Component of the cpSRP complex, composed of a FFC/cpSRP54 monomer and a CAO/cpSRP43 dimer. Interacts (via C-terminus) with CAO/cpSRP43 and with CPFTSY. Interacts with the third transmembrane domain of LHCP. Interacts with the PSBA/D1 nascent chain, but only when it is attached to the 70S ribosome and if it is shorter than 189 amino acid residues.
messages: Involved in cotranslational and post-translational sorting of thylakoid proteins. Binds GTP specifically. Activates the GTPase activity of CPFTSY when bound together. Required for light-harvesting chlorophyll a/b-binding protein (LHCP) integration into thylakoids.
messages: Most abundant in green shoot tissue and lower levels seen in the roots and etiolated buds.
messages: Pale green with delayed development.
messages: The C-terminal residues (539-564) are required for interaction with CAO/cpSRP43.
messages: The M-domain stimulates the interaction between CPFTSY and the chloroplast signal recognition particle (cpSRP).
messages: Unlike eukaryotic or prokaryotic signal recognition particle (SRP), the chloroplast SRP from higher plants lacks an SRP-RNA component. It targets both chloroplast-encoded and nucleus-encoded substrates to the thylakoid membrane, post-translationally for the nucleus-encoded proteins and co-translationally for the chloroplast-encoded proteins.
messages: chloroplast stroma

3702:AT5G40860
gene id: 3702:AT5G40860
uniprot id: A0A178UMW3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G21880
gene id: 3702:AT4G21880
uniprot id: A0A178UWX3
uniprot id: O49711
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G14010
gene id: 3702:AT3G14010
uniprot id: Q94AM9
names: Domain
names: Tissue Specificity
messages: Contains a tandem repeat of a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Expressed in cauline leaves, stems, rosette leaves, immature siliques and primary inflorescences.

3702:AT1G59530
gene id: 3702:AT1G59530
uniprot id: Q9LQ65
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109.

3702:AT3G20015
gene id: 3702:AT3G20015
uniprot id: A0A178VJL3
uniprot id: Q9LHE3
names: Disruption Phenotype
names: Function
names: Similarity
messages: Aspartic protease that may be involved in drought avoidance through abscisic acid signaling.
messages: Belongs to the peptidase A1 family.
messages: No effect on stomatal closure.

3702:AT4G28800
gene id: 3702:AT4G28800
uniprot id: A0A1P8B7L8
uniprot id: A0A2H1ZEQ1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G28140
gene id: 3702:AT4G28140
uniprot id: A0A654FTZ4
uniprot id: Q9M0J3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G62670
gene id: 3702:AT3G62670
uniprot id: Q9LZJ8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARR family. Type-B subfamily.
messages: Binds the target DNA as a monomer.
messages: Nucleus
messages: Predominantly expressed in mature pistil tip. Also detected in the shoot apical meristem as well as vascular tissue and hydathodes of the leaves.
messages: Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity).
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT5G28510
gene id: 3702:AT5G28510
uniprot id: Q9LKR7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Endoplasmic reticulum lumen

3702:AT5G64120
gene id: 3702:AT5G64120
uniprot id: A0A178UAR8
uniprot id: Q43387
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Induced in response of mechanical wounding. Induced by methyl jasmonate, a plant defense-related signaling molecule. Expressed under a diurnal rhythm (circadian clock control).
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: Slightly expressed in roots.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT3G61820
gene id: 3702:AT3G61820
uniprot id: A0A5S9XPM5
uniprot id: Q9M356
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G04150
gene id: 3702:AT1G04150
uniprot id: O64492
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MCTP family.
messages: Endoplasmic reticulum membrane
messages: Highly expressed in roots meristems, shoot apical meristems (SAMs) and in incipient leaf primordia (PubMed:29259105). Observed in flowers (PubMed:29259105).
messages: May function as a signaling molecule by regulating the trafficking of other regulators.
messages: Present in developing flowers, particularly in pistils.

3702:AT2G16510
gene id: 3702:AT2G16510
uniprot id: A0A178VXD8
uniprot id: P0DH92
uniprot id: P0DH93
uniprot id: P0DH94
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the V-ATPase proteolipid subunit family.
messages: Expressed in leaf, root, flower and silique.
messages: Expressed in leaf, root, flower and silique. Expression is lower in roots.
messages: Membrane
messages: Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e). The proteolipid components c and c'' are present as a hexameric ring that forms the proton-conducting pore.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.
messages: Vacuole membrane

3702:AT3G49420
gene id: 3702:AT3G49420
uniprot id: A0A384KRW6
uniprot id: Q9SCL4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GOT1 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G27145
gene id: 3702:AT2G27145
uniprot id: A0A5S9X1T4
uniprot id: P82724
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G16860
gene id: 3702:AT4G16860
uniprot id: F4JNA9
names: Domain
names: Function
names: Subunit
messages: Interacts with RSH1.
messages: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis isolates Emoy2 and Emwa1 (downy mildew disease) (PubMed:11846877). Plays a role in the regulation of temperature response during plant growth and survival (PubMed:20699401).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT1G56680
gene id: 3702:AT1G56680
uniprot id: A0A1P8AME8
uniprot id: A0A654EJ26
uniprot id: Q9FXB8
names: Similarity
messages: Belongs to the glycosyl hydrolase 19 family. Chitinase class I subfamily.

3702:AT3G27970
gene id: 3702:AT3G27970
uniprot id: B3LFC1
names: Similarity
messages: Belongs to the REXO1/REXO3 family.
messages: Belongs to the REXO4 family.

3702:AT4G35920
gene id: 3702:AT4G35920
uniprot id: Q8L7E9
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Calcium-permeable stretch-activated channel component. Involved in mechano-stimulated calcium uptake mechanism and in mechanosensing in the primary root.
messages: Cell membrane
messages: Expressed in roots, leaves, stems, flowers and siliques. Expressed in vascular tissues of cotyledons, leaves and primary root, in the promeristem and adjacent elongation zone of the primary root and in the shoot apical meristem. Detected in the stele and endodermis, but not in the cortex, epidermis or root cap, including the columella. Not expressed in root hairs or in mesophyll cells of leaves and cotyledons.
messages: Inhibited by GdCl(3), but not by verapamil.
messages: No visible phenotype when grown under normal conditions; due to partial redundancy with MCA2. The roots are unable to sense a change in the hardness of the growth medium. Mca1 and mca2 double mutant shows a strong growth defect.

3702:AT1G80180
gene id: 3702:AT1G80180
uniprot id: Q9SSC1
names: Function
names: Tissue Specificity
messages: Expressed in developing cotyledons, mature cotyledons, cotyledon epidermis and stomata.
messages: May play a role in the regulation of stomata patterning.

3702:AT1G51340
gene id: 3702:AT1G51340
uniprot id: A0A178W9H8
uniprot id: A0A1P8AU65
uniprot id: Q9SYD6
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in parallel but independently of ALMT1, an aluminum-activated root malate transporter.
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Cell membrane
messages: Citrate transporter critical for aluminum tolerance. Responsible for citrate exudation into the rhizosphere to protect roots from aluminum toxicity.
messages: Expressed in roots, but not in shoots (PubMed:18826429, PubMed:22413742). Detected in the mature regions of the root, extending from above the root-hair region to the root-shoot junction (PubMed:22413742).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May be due to a competing donor splice site. Aberrant spliced mRNA with a premature translation termination codon (PTC) that could be the target of the NMD degradation pathway.
messages: Membrane
messages: No visible phenotype when grown under normal conditions. Strong reduction of aluminum-activated citrate release and small decrease in aluminum tolerance.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by aluminum (PubMed:18826429, PubMed:22413742). The STOP1 transcription factor is required for MATE expression (PubMed:18826429).

3702:AT4G20840
gene id: 3702:AT4G20840
uniprot id: A0A178UZ42
uniprot id: Q9SVG3
names: Caution
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G57300
gene id: 3702:AT5G57300
uniprot id: A0A178U865
uniprot id: Q9LVC8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.
messages: Component of a multi-subunit COQ enzyme complex.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Methyltransferase required for the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).
messages: Mitochondrion inner membrane

3702:AT1G19350
gene id: 3702:AT1G19350
uniprot id: A0A654ECR7
uniprot id: F4HP45
uniprot id: Q9LN63
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the BZR/LAT61 family.
messages: Cytoplasm
messages: Functions in brassinosteroid signaling. May function as transcriptional repressor.
messages: Interacts with ASK7/BIN2 through its C-terminal domain and with the bHLH transcription factors BIM1, BIM2 and BIM3 through its C- and N-terminal domains. Interacts (via N-terminus) with REF6 and ELF6 (PubMed:12427989, PubMed:15680330, PubMed:18467490). Interacts with MYB30 (PubMed:19170933). Interacts with IWS1 (PubMed:20139304). Interacts with ASHH2/SDG8 (PubMed:24838002). Binds to MYB56 when dephosphorylated in the nucleus of quiescent center (QC) cells (PubMed:24981610). Binds to WRKY46, WRKY54 and WRKY70 to cooperatively regulate the expression of target genes (PubMed:28576847).
messages: Nucleus
messages: Phosphorylated by ASK7/BIN2. Phosphorylation increases protein degradation and/or interferes with the nuclear localization.
messages: Positive regulator of brassinosteroid (BR) signaling. Transcription factor that activates target gene expression by binding specifically to the DNA sequence 5'-CANNTG-3'(E box) through its N-terminal domain. Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BIM1, BIM2 or BIM3. The C-terminal domain is probably involved in transcriptional activation (PubMed:12007405, PubMed:15680330, PubMed:18467490, PubMed:19170933). Recruits the transcription elongation factor IWS1 to control BR-regulated gene expression (PubMed:20139304). Forms a trimeric complex with IWS1 and ASHH2/SDG8 to regulate BR-regulated gene expression (PubMed:24838002). Promotes quiescent center (QC) self-renewal by cell divisions in the primary root. Binds to the E-boxes of the BRAVO promoter to repress its expression (PubMed:24981610).
messages: Reduced brassinosteroid (BR)-mediated quiescent center (QC) cells division.
messages: The central part (140-272) is important for interaction with MYB30.
messages: Ubiquitously expressed in cotyledons, leaves, hypocotyls and roots.

3702:AT2G35345
gene id: 3702:AT2G35345
uniprot id: A0A178VUG8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G52400
gene id: 3702:AT3G52400
uniprot id: A0A178VEE7
uniprot id: Q9SVC2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the syntaxin family.
messages: Membrane
messages: Part of the t-SNARE complex.
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT2G44420
gene id: 3702:AT2G44420
uniprot id: O64876
names: Function
messages: N-terminal asparagine deamidase that mediates deamidation of N-terminal asparagine residues to aspartate. Required for the ubiquitin-dependent turnover of intracellular proteins that initiate with Met-Asn. These proteins are acetylated on the retained initiator methionine and can subsequently be modified by the removal of N-acetyl methionine by acylaminoacid hydrolase (AAH). Conversion of the resulting N-terminal asparagine to aspartate by NTAN1 renders the protein susceptible to arginylation, polyubiquitination and degradation as specified by the N-end rule. This enzyme does not act on substrates with internal or C-terminal asparagines and does not act on glutamine residues in any position (By similarity). Does not seem to be involved in immune response, unlike the N-terminal glutamine amidohydrolase NTAQ1 (PubMed:30117535).

3702:AT3G56120
gene id: 3702:AT3G56120
uniprot id: Q93YU6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family.
messages: Cytoplasm
messages: Mitochondrion matrix
messages: Monomer.
messages: Nucleus
messages: Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding.

3702:AT5G15060
gene id: 3702:AT5G15060
uniprot id: A0A654G179
uniprot id: P59469
names: Similarity
messages: Belongs to the LOB domain-containing protein family.

3702:AT1G11580
gene id: 3702:AT1G11580
uniprot id: A0A1P8ARX5
uniprot id: A0A654EA26
uniprot id: Q1JPL7
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin. Inhibits the elongation phase of protein synthesis.
messages: Expressed during early seed development and late developmental phases of siliques.
messages: Expressed in siliques, flowers, floral stems, rosette leaves and roots.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT2G47700
gene id: 3702:AT2G47700
uniprot id: O82239
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Levels are following a circadian rhythm oscillated under day/night cycles with higher levels during the night.
messages: Mediates phytochrome (phyA and phyB)-controlled seedling deetiolation responses such as hypocotyl elongation in response to red and far-red light (PubMed:16709197, PubMed:16384903). Required for light-induced expression of LHCB3 and CHALCONE SYNTHASE (CHS) (PubMed:16384903). Regulates negatively CONSTANS (CO) and FLOWERING LOCUS T (FT) expression and photoperiodic flowering (PubMed:16709197).
messages: Nucleus
messages: Photomorphogenic mutant insensitive to red and far-red light leading to long hypocotyls. Flowers early particularly under long days (PubMed:16709197, PubMed:16384903). Also impaired in phytochrome-mediated end-of-day far-red light response, cotyledon expansion, far-red light block of greening, and light-induced expression of LHCB3 and CHALCONE SYNTHASE (CHS) (PubMed:16384903). Enhanced expression of CONSTANS (CO) and FLOWERING LOCUS T (FT) under long days and short days (PubMed:16709197).

3702:AT3G05960
gene id: 3702:AT3G05960
uniprot id: A0A5S9X9K6
uniprot id: Q9SFG0
names: Activity Regulation
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: First observed in pollen right before the opening of floral buds. Levels increase during pollen maturation.
messages: Inhibited by uncouplers such as 2,4-dinitrophenol and carbonyl cyanide-m-chlorophenyl-hydrazone.
messages: Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Can transport glucose, 3-O-methylglucose, mannose, fructose and galactose, and, to a lower extent, xylose and ribulose.
messages: Membrane
messages: Pollen specific.

3702:AT4G14560
gene id: 3702:AT4G14560
uniprot id: P49677
uniprot id: Q67YC2
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers.
messages: Homodimers and heterodimers. Interacts with the auxin-responsive protein IAA2. Interacts with TPL.
messages: Nucleus
messages: Phosphorylated by phytochrome A in vitro.
messages: Preferentially expressed in stems, leaves and flowers.
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT2G18950
gene id: 3702:AT2G18950
uniprot id: A0A178VWH1
uniprot id: A0A1P8B2S8
uniprot id: Q8VWJ1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family.
messages: Involved in the synthesis of tocopherol (vitamin E). Catalyzes the condensation of homogentisate and phytyl diphosphate to form dimethylphytylhydrquinone. Low activity with geranylgeranyl diphosphate as substrate, but no activity with farnesyl diphosphate or solanesyl diphosphate. Tocopherol functions to limit lipid oxidation during seed desiccation, quiescence and germination and early seedling development. Protects thylakoid membrane lipids from photooxidation and is required for low-temperature adaptation.
messages: Reduced seed longevity, severe seedling growth defects during germination and high levels of lipid hydroperoxides and hydroxy fatty acids.
messages: Seeds and plants overexpressing HPT1 accumulate increased levels of tocopherol.
messages: chloroplast membrane

3702:AT5G42240
gene id: 3702:AT5G42240
uniprot id: Q9FH05
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expression not detected.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT4G13380
gene id: 3702:AT4G13380
uniprot id: A0A178UXC4
uniprot id: Q9T0K9
names: Caution
names: Developmental Stage
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Expressed very early during embryo and endosperm formation and during the proliferative stage of endosperm development at 4 days after pollination.
messages: Probable heavy-metal-binding protein (By similarity). Required for female gametophyte development and function (PubMed:15634699).
messages: The HMA domain lacks the core conserved Cys-X-X-Cys motif.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G04050
gene id: 3702:AT3G04050
uniprot id: Q9SQQ7
names: Similarity
messages: Belongs to the pyruvate kinase family.

3702:AT2G45450
gene id: 3702:AT2G45450
uniprot id: F4IG60
names: Function
names: Induction
names: Subunit
names: Tissue Specificity
messages: Competitive inhibitor of the HD-ZIPIII transcription factors in shoot apical meristem (SAM) development. Acts by forming non-functional heterodimers. Part of a negative feedback loop. Essential for proper functioning of stem cells in the SAM.
messages: Expressed in the adaxial epidermis of the cotyledons and in the vascular cylinder of wild-type torpedo stage embryos.
messages: Interacts with REV.
messages: Up-regulated in response to increased HD-ZIPIII activity (PubMed:18055602). Up-regulated by REV (PubMed:22781836).

3702:AT5G39160
gene id: 3702:AT5G39160
uniprot id: F4KD16
uniprot id: F4KD18
uniprot id: P92999
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT3G57230
gene id: 3702:AT3G57230
uniprot id: A0A178VIZ5
uniprot id: A2RVQ5
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed at high levels in leaves, moderate levels in roots, seedlings and stems, and at low levels in flowers, pollen and siliques. Accumulates in leaf guard cells and trichomes. Also present in epidermal cells of roots (PubMed:11115127, PubMed:12837945, PubMed:12949148). Expressed in mature guard cells (PubMed:17704216).
messages: Homodimer. Interacts with AGL15, AGL24, AP1, AGL6, AG, AGL1, AGL11, AGL5, SEP3, SEP1, AGL63, AGL14, SOC1 and AGL21 (PubMed:15805477). Interacts with AGL63 (PubMed:20598091). Interacts with SVP (PubMed:24876250).
messages: Nucleus
messages: Probable transcription factor involved in the regulation of flowering time in long-day photoperiod. Participates in the repression of FT expression and floral transition, by interacting closely with the FLC-SVP pathways (PubMed:24876250). Functions in the satellite meristemoid lineage of stomatal development (PubMed:17704216).
messages: Repressed by the micro RNA miR824.

3702:AT1G56440
gene id: 3702:AT1G56440
uniprot id: A0A178WG02
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G05720
gene id: 3702:AT3G05720
uniprot id: A0A654F618
uniprot id: Q9M9X7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the importin alpha family.
messages: Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (By similarity). Acts as cellular receptor for the nuclear import of the virD2 protein of Agrobacterium, but is not essential for Agrobacterium-mediated root transformation (PubMed:18836040).
messages: Binds to conventional NLS motifs.
messages: Forms a complex with importin subunit beta-1.
messages: Nucleus envelope

3702:AT5G10380
gene id: 3702:AT5G10380
uniprot id: Q9LX93
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Auto-ubiquitinated.
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Cell membrane
messages: E3 ubiquitin-protein ligase that may be involved in positive regulation of programmed cell death (PCD) by facilitating degradation of negative regulators of PCD. May be involved in the early steps of the plant defense signaling pathway. Undergoes auto-ubiquitination.
messages: Hyposensitivity to the fungal toxin fumonisin B1 (FB1).
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: Up-regulated by chitin. Up-regulated by the fungal toxin fumonisin B1 (FB1) treatment and pathogen infection.

3702:AT1G09270
gene id: 3702:AT1G09270
uniprot id: A0A178WMY7
uniprot id: O80480
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the importin alpha family.
messages: Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope. Acts as cellular receptor for the nuclear import of the virD2 protein of Agrobacterium and is essential for Agrobacterium-mediated root transformation.
messages: Binds to conventional NLS motifs.
messages: Forms a complex with importin subunit beta-1 (By similarity). Interacts with A.tumefaciens VirD2 and VirE2 (PubMed:18836040).
messages: Forms a complex with importin subunit beta-1.
messages: Nucleus envelope

3702:AT1G62720
gene id: 3702:AT1G62720
uniprot id: A0A178WIB7
uniprot id: Q9SI78
names: Caution
names: Similarity
messages: Belongs to the PPR family. P subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G16520
gene id: 3702:AT4G16520
uniprot id: A0A1P8B738
uniprot id: Q8VYK7
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG8 family.
messages: Constitutively expressed.
messages: Interacts with ATG4 (By similarity). Interacts with NBR1 (PubMed:21606687). Interacts with ATI1 and ATI2 (PubMed:22253227). Interacts with SH3P2 (PubMed:24249832).
messages: The C-terminal 4 residues are removed by ATG4 to expose Gly-117 at the C-terminus. This Gly-117 forms then a thioester bond with the 'Cys-558' of ATG7 (E1-like activating enzyme) before being transferred to the 'Cys-258' of ATG3 (the specific E2 conjugating enzyme), in order to be finally amidated with phosphatidylethanolamine. This lipid modification anchors ATG8 to autophagosomes.
messages: Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
messages: Vacuole membrane
messages: autophagosome membrane
messages: cytoskeleton

3702:AT3G24050
gene id: 3702:AT3G24050
uniprot id: Q8LAU9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Mostly expressed in roots. Also expressed in stems, flowers and leaves.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

3702:AT1G76970
gene id: 3702:AT1G76970
uniprot id: A0A1P8AQI3
uniprot id: A0A1P8AQI5
uniprot id: Q6NQK0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TOM1 family.
messages: Cytoplasm
messages: Membrane
messages: Might contribute to the loading of the ESCRT machinery.
messages: Ubiquitously expressed.

3702:AT2G16835
gene id: 3702:AT2G16835
uniprot id: Q8RUB7
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G37510
gene id: 3702:AT5G37510
uniprot id: B9DFQ9
uniprot id: Q9FGI6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 75 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Complex I is composed of at least 49 different subunits. This is a component of the iron-sulfur (IP) fragment of the enzyme.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). This is the largest subunit of complex I and it is a component of the iron-sulfur (IP) fragment of the enzyme. It may form part of the active site crevice where NADH is oxidized (By similarity).
messages: Mitochondrion inner membrane

3702:AT2G35930
gene id: 3702:AT2G35930
uniprot id: A0A654F0N2
uniprot id: Q84TG3
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Auto-ubiquitinated.
messages: By cold, drought and salt stresses, bacterial elicitor flg22, and bacterial and oomycete pathogens.
messages: Cytoplasm
messages: E3 ubiquitin-protein ligase that negatively regulates water stress response. May control in coordination with PUB23 a drought signaling pathway by ubiquitinating cytosolic RPN12a. Acts as negative regulator of the immunity triggered by the pathogen-associated molecular patterns (PAMPs), in association with PUB22 and PUB24.
messages: Functions as an E3 ubiquitin ligase.
messages: Increased tolerance to drought stress.
messages: Interacts with RPN12A.

3702:AT4G39810
gene id: 3702:AT4G39810
uniprot id: F4JJ23
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in the sieve elements and phloem pole pericycle cells.
messages: Nucleus
messages: Probable exonuclease required for enuclation of sieve elements.
messages: Regulated by the transcription factors NAC045 and NAC086.
messages: Shorter root phenotype and impaired phloem function.

3702:AT1G34065
gene id: 3702:AT1G34065
uniprot id: A0A1P8ATX1
uniprot id: F4HT41
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Expressed at low levels in seedlings, leaves, flowers, stems and roots.
messages: Membrane
messages: Probable S-adenosylmethionine (SAM) transporter able to catalyze both uniport and exchange reactions through membranes.
messages: chloroplast membrane

3702:AT1G56220
gene id: 3702:AT1G56220
uniprot id: A0A178WNF8
uniprot id: A0A1P8ASR5
uniprot id: A0A2H1ZEE3
uniprot id: A0A2H1ZEE5
uniprot id: Q8LD26
names: Caution
names: Similarity
messages: Belongs to the DRM1/ARP family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G75470
gene id: 3702:AT1G75470
uniprot id: Q9LQZ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT1G65352
gene id: 3702:AT1G65352
uniprot id: Q2V4F0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G52790
gene id: 3702:AT5G52790
uniprot id: A0A1P8BGS5
uniprot id: A0A1P8BGT2
uniprot id: A0A1P8BGT4
uniprot id: A0A5S9YDE8
uniprot id: Q9LTD8
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G42200
gene id: 3702:AT2G42200
uniprot id: Q700W2
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Expressed constitutively during plant development, with a strong increase during flower development.
messages: Negatively regulated by microRNAs miR156 and miR157.
messages: Nucleus
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

3702:AT1G50050
gene id: 3702:AT1G50050
uniprot id: A0A384LK78
uniprot id: F4I4X9
uniprot id: Q9LPM6
names: Function
messages: Probably involved in the defense reaction of plants against pathogens.

3702:AT3G18940
gene id: 3702:AT3G18940
uniprot id: A0A5S9XDH9
uniprot id: Q9LJ72
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PSMG2 family.
messages: Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1.
messages: Forms a heterodimer with PSMG1.

3702:AT4G25990
gene id: 3702:AT4G25990
uniprot id: A0A654FT00
uniprot id: C0SVJ8
uniprot id: Q94KJ2
uniprot id: Q9SZH3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G73655
gene id: 3702:AT1G73655
uniprot id: Q8LB65
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: chloroplast thylakoid lumen

3702:AT2G43900
gene id: 3702:AT2G43900
uniprot id: A0A1P8AX44
uniprot id: O80560
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the inositol polyphosphate 5-phosphatase family.
messages: Has phosphatase activity toward Ins(1,4,5)P3 (PubMed:15574849). Controls Ins(1,4,5)P3/Ca(2+) levels that is crucial for maintaining pollen dormancy and regulating early germination of pollen (PubMed:22573619).
messages: Mostly expressed in leaves and flowers and only weakly expressed in roots, stem and young seedlings. More precisely detected in cotyledon tips, hydathodes of leaves and mature pollen grains.
messages: Not induced by stresses.
messages: Precocious pollen germination within anthers. Hypersensitivity to abscisic acid (ABA) during seed germination. Elevated levels of Ins(1,4,5)P3 and cytosolic Ca(2+).

3702:AT4G21680
gene id: 3702:AT4G21680
uniprot id: Q8GXN2
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Expressed in xylem parenchyma cells within the vasculature. Expressed in siliques and flowers. Higher expression in shoots than in roots.
messages: Low-affinity nitrate transporter. Involved in nitrate removal from xylem sap. Not involved in oligopeptides transport.
messages: No visible phenotype. Higher nitrate concentration in xylem sap and increased cadmium sensitivity. A greater proportion of nitrate accumulates in shoots under cadmium stress.
messages: Up-regulated by cadmium and nitrate.

3702:AT5G63020
gene id: 3702:AT5G63020
uniprot id: Q8RXS5
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT3G20470
gene id: 3702:AT3G20470
uniprot id: Q9LTP5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in response to flooding stress (PubMed:2152168). Induced by salicylic acid (SA) and abscisic acid (ABA) (PubMed:2152168, PubMed:18657431). Stimulated by 16-hydroxypalmitic acid (HPA), a major component of cutin (PubMed:18657431).
messages: Expressed during somatic embryogenesis, especially in cells undergoing the first anatomical modifications leading to somatic embryo development. Accumulates also during zygotic embryo development. First detected at heart-shape-torpedo transition in the whole embryos. Developmentally regulated in cotyledons and hypocotyl, being restricted to the radicule in early and late torpedo, until the embryo reaches maturity. Gradual decrease at the seed coat during seed development. After fertilization, restricted to the seed coat and endosperm.
messages: Involved in organ growth by promoting cell elongation processes.
messages: Mostly expressed in immature seed pods, and, to a lower extent, in stems and leaves (PubMed:2152168). Present in phloem and epiderm in leaves, stems, flowers and fruits (PubMed:20195610).
messages: Reduced organ length (e.g. inflorescence axis and roots).
messages: Vacuole

3702:AT5G02120
gene id: 3702:AT5G02120
uniprot id: O81208
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ELIP/psbS family.
messages: High light sensitivity leading to stunted growth with pale-green leaves on agar plates, but unable to grow on soil (PubMed:29438089). Impaired photosystem II (PSII) core protein function and reduced levels of photosystem I core proteins (PubMed:29438089).
messages: Highly expressed in seedling cotyledons and shoot apices in young and mature plants.
messages: Induced by exposure to high light (PubMed:10794534, PubMed:29438089, PubMed:30489183). Expression follows circadian diurnal fluctuations with highest levels before and shortly after the light phase (PubMed:10794534).
messages: May bind chlorophyll and form dimers in the thylakoid membrane (Probable). Component of a high molecular weight complex containing OHP1, OHP2 and HCF244, and PSII core proteins D1/D2, HCF136 and HCF173 (PubMed:29438089). Interacts with HCF244 (PubMed:29438089) (Probable). Forms a trimeric complex with OHP2 and HCF244 that mutually stabilizes each subunit (PubMed:29930106, PubMed:30397023).
messages: May play a photoprotective role in the thylakoid membrane in response to light stress (Probable). Involved in photosystems I (PSI) and II (PSII) core proteins function (PubMed:29438089). Forms a trimeric complex with OHP2 and HCF244 that is required to promote PSII core subunit assembly (PubMed:29930106, PubMed:30397023). The trimeric complex forms a transient PSII reaction center-like complex with PsbA, PsbD, PsbE, PsbF and PsbI subunits in thylakoids for early assembly of PSII as well as PSII repair (PubMed:30397023). The trimeric complex is required for the recruitment of ribosomes to the psbA mRNA during PSII biogenesis and repair (PubMed:31991763). Forms an heterodimer with OHP1 that binds chlorophylls and carotenoids, and that may function in the delivery of pigments to the PsbA subunit of PSII (PubMed:32071152).
messages: Mostly expressed in cotyledons and shoot apices.
messages: chloroplast thylakoid membrane

3702:AT1G13650
gene id: 3702:AT1G13650
uniprot id: A0A178WE38
uniprot id: A0A384L148
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G11680
gene id: 3702:AT4G11680
uniprot id: Q93Z92
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Mediates E2-dependent protein ubiquitination in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT3G03540
gene id: 3702:AT3G03540
uniprot id: Q9S816
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the bacterial phospholipase C family.
messages: No visible phenotype under normal growth conditions, but mutant plants accumulates reduced levels of digalactosyldiacylglycerol (DGDG) during phosphate limitation.
messages: Non-specific phospholipase C (PLC) which assumes minor PLC activity during inorganic phosphate starvation. Can hydrolyze both phosphatidylcholine (PC) and phosphatidylethanolamine (PE). Required for normal accumulation of digalactosyldiacylglycerol (DGDG) during phosphate limitation and may contribute to the conversion of phospholipids to diacylglycerol, the substrate for galactolipid synthesis.
messages: Slightly induced by inorganic phosphate deprivation.
messages: Specifically expressed in flowers.
messages: cytosol

3702:AT1G18740
gene id: 3702:AT1G18740
uniprot id: Q9M9U5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ROH1 family.
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in roots, stems, leaves, flowers, siliques and seedlings, with highest levels in roots.
messages: In roots, observed in all tissues with highest levels in the vascular cylinder, the meristematic zone of the primary root tissue, and lateral root (LR) primordia.
messages: Interacts with GRF6/14-3-3lambda via its N-terminal region (PubMed:31297122). Binds to TTL (PubMed:32664862). Associates to the exocyst at the plasma membrane and in small vesicles; binds directly to SEC3A, SEC5A, SEC6, SEC10, SEC15B, EXO70B1, EXO70C1, EXO70E1, EXO70F1 AND EXO84B (PubMed:35249253).
messages: No visible phenotype (PubMed:26485022, PubMed:31297122). Longer hypocotyls and greater fresh weight (PubMed:32664862). Greater production of lateral roots due to increased lateral root primordium initiation and associated with a stronger auxin signal in stage I lateral root primordia where PIN1 and PIN3 accumulates abnormally, as a result of defective PIN-FORMED (PIN) auxin efflux carrier proteins exocytosis (PubMed:35249253). Strongly inhibited by the auxin influx inhibitor 2-naphthoxyacetic acid (2-NOA); this impact is partially eliminated by the auxin efflux inhibitor N-naphthylphthalamic acid (NPA) (PubMed:35249253). Plants impaired for both B1L and EXO70B1 produce more lateral roots than single mutants (PubMed:35249253). Increased sensitivity to freezing treatment in cold-acclimated (CA) conditions leading to higher ion leakage, and associated with a reduced expression of C-repeat binding factors (CBFs) and CBF target genes, including the promotion of CBF3 degradation (PubMed:31297122). Reduced brassinolide-promoted hypocotyl elongation and lower allantoin accumulation only under cold conditions (PubMed:32664862). Increased sensitivity to cold in plants lacking both B1L and GRF6 (PubMed:31297122). But enhanced freezing tolerance in the triple mutant lacking B1L, GRF6 and GRF8 (PubMed:31297122). The double mutant b1l ttl exhibits a developmental phenotype and freezing tolerance comparable to the single mutant ttl (PubMed:32664862).
messages: Nucleus
messages: Rapidly induced by cold.
messages: Together with TRANSTHYRETIN-LIKE protein (TTL), prevents plant growth and development, but by opposition to TTL, regulates positively cold tolerance, probably in a brassinosteroid (BR) and allantoin-dependent manner (PubMed:32664862). Controls lateral root initiation by modulating exocytic vesicular trafficking-mediated PIN-FORMED (PIN, e.g. PIN1 and PIN3) auxin efflux carrier proteins recycling, thus influencing polar auxin efflux transport in lateral root primordia (PubMed:35249253). Contributes to freezing acclimation via the C-repeat binding factor (CBF) pathway, probably by stabilizing CBF and promoting the expression of CBF pathway genes; this regulation involves the suppression of ubiquitin-mediated degradation of CBF3 triggered by GRF6/14-3-3lambda and GRF8/14-3-3kappa (PubMed:31297122).
messages: Vesicle

3702:AT3G15660
gene id: 3702:AT3G15660
uniprot id: A0A178VHP8
uniprot id: Q8LBK6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glutaredoxin family. CGFS subfamily.
messages: May only reduce GSH-thiol disulfides, but not protein disulfides. Participates probably to the maturation of iron-sulfur proteins and to the regulation of the redox state of the BOLA proteins.
messages: Mitochondrion
messages: [2Fe-2S]-bridged holo-homodimer (By similarity). Interacts in vitro with SUFE1, BOLA1, BOLA2 and BOLA4 (PubMed:24203231). Interacts in vivo only with BOLA4 (PubMed:24203231).

3702:AT5G64470
gene id: 3702:AT5G64470
uniprot id: A0A1P8BA20
uniprot id: A0A5S9YH00
uniprot id: Q9FGE9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT4G13520
gene id: 3702:AT4G13520
uniprot id: Q9T0H2
names: Disruption Phenotype
names: Domain
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, flowers, siliques, stems, leaves and seeds. In flowers, detected in petals, anthers and pistils.
messages: Interacts with the COP9 signalosome.
messages: Mediates responses to the synthetic auxin 2,4-dichlorophenoxyacetic acid (2,4-D). Not involved in the response to indole-3-acetic acid (IAA). Interacts with RUB modification-related components and may regulate the cullin-ring ubiquitin E3 ligase complex (CRL) activity.
messages: No visible phenotype, except a longer hypocotyl in light-grown seedlings.
messages: The F/D-rich region (45-62) is necessary but not sufficient for SMAP1 function.

3702:AT5G20980
gene id: 3702:AT5G20980
uniprot id: Q0WNZ5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the vitamin-B12 independent methionine synthase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation.
messages: Expressed in seeds.
messages: chloroplast

3702:AT1G73650
gene id: 3702:AT1G73650
uniprot id: A0A654ENR0
uniprot id: A8MQG9
uniprot id: B3H655
uniprot id: B9DFE9
uniprot id: F4HRY1
uniprot id: Q940M8
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G20340
gene id: 3702:AT2G20340
uniprot id: A0A1P8B021
uniprot id: Q8RY79
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the group II decarboxylase family.
messages: Bifunctional enzyme that catalyzes the decarboxylation of L-phenylalanine to 2-phenylethylamine, which is then oxidized to form 2-phenylacetaldehyde, a constituent of floral scent (PubMed:21284755, PubMed:23204519). 2-phenylacetaldehyde is a precursor of 2-phenylethanol, another constituent of floral scent (PubMed:21284755). Catalyzes both the decarboxylation and deamination of L-dopa to 3,4-dihydroxylphenylacetaldehyde (DHPAA) (PubMed:21284755).
messages: Expressed in roots, rosette leaves, stems, cauline leaves and flowers.
messages: Homodimer.
messages: Induced by wounding and methyl jasmonate in leaves.

3702:AT4G23750
gene id: 3702:AT4G23750
uniprot id: A0A178V319
uniprot id: Q9SUQ2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By cytokinins.
messages: Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
messages: Cytoplasm
messages: Nucleus

3702:AT2G04540
gene id: 3702:AT2G04540
uniprot id: A0A178VUN0
uniprot id: Q8L3X9
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Catalyzes all the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (PubMed:17616510, PubMed:28202596). Able to elongate saturated acyl chains from 4 to at least 16 carbons (PubMed:17616510, PubMed:28202596). Uses malonyl-CoA but not acetyl-CoA as primer substrate (PubMed:17616510). When expressed in a heterologous system, reveals a bimodal distribution of products, with peaks at C8 and C14-C16 (PubMed:17616510). The major product of the reaction (octanoyl-ACP) is required for the lipoylation of essential mitochondrial proteins (PubMed:17616510, PubMed:28202596). Required for mitochondrial fatty acid synthesis (mtFAS) (PubMed:28202596). MtFAS are essential for photorespiration and plant development, probably by influencing mitochondrial membrane lipid composition and other lipid metabolic pathways (PubMed:28202596).
messages: Expressed at the same level in leaves, roots, siliques and flowers.
messages: Homodimer.
messages: Inhibited by cerulenin.
messages: Mitochondrial protein lipoylation in leaves does not exclusively depend on the lipoate biosynthesis by KAS and may occur independently of this pathway in roots.
messages: Mitochondrion
messages: Slow growth and bleached leaf phenotype when grown under ambient air, but normal growth under CO(2)-enriched air (PubMed:17616510, PubMed:28202596). Thicker leaves due to enlarged mesophyll cells when grown in ambient air and associated with altered thylakoid membrane assembly and starch granule ultrastructure; these phenotypes are partly reversed when grown in 1 percent CO(2) atmosphere (PubMed:28202596). Highly prevents lipoylation of the H-protein subunit of the glycine decarboxylase (GDC) in leaves, but has only a limited effect on the lipoylation of the E2 subunits of pyruvate dehydrogenase (PDH) and alpha-ketoacid dehydrogenase (KGDH) complexes in leaves and even no effect in roots (PubMed:17616510, PubMed:28202596). Depleted 3-hydroxytetradecanoic acid levels (PubMed:28202596).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G49845
gene id: 3702:AT3G49845
uniprot id: F4IZ80
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: Cell membrane
messages: Cytoplasm
messages: Heterodimers (PubMed:29272523). Interacts with CYSTM7 and WIH1/CYSTM13 (PubMed:29272523).
messages: Induced by heat and oxidation stress in shoots (PubMed:29272523). Induced in roots in response to cold and salt (PubMed:29272523).
messages: Involved in resistance to abiotic stress.
messages: Mostly expressed in stems and,at low levels, in stems, roots, flowers, siliques and leaves.

3702:AT5G12290
gene id: 3702:AT5G12290
uniprot id: A0A178UP20
uniprot id: A0A1P8BBA3
uniprot id: Q8GUK1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of a mitochondrial large protein complex that contains, at least, MIC60, DGS1, TOM40 (e.g. TOM40-1), TOM20 proteins (e.g. TOM20-2), and petC/RISP.
messages: Involved in galactoglycerolipid biosynthesis (PubMed:18208519). Contributes to an intracellular signal that regulates an alternative DGD1-independent galactoglycerolipid biosynthesis pathway in chloroplasts (PubMed:18208519, PubMed:20181751). Being involved in mitochondrial lipid homeostasis, modulates mitochondrion biogenesis and physiology, as well as stress responses (PubMed:31118221).
messages: Membrane
messages: Mitochondrion outer membrane
messages: No effect on plant growth, AOX levels, mitochondrial protein content, and lipid composition.

3702:AT3G50980
gene id: 3702:AT3G50980
uniprot id: A0A178VG83
uniprot id: P25863
names: Induction
names: Similarity
messages: Belongs to the plant dehydrin family.
messages: Not induced by low temperature, abscisic acid or drought stress.

3702:AT2G40290
gene id: 3702:AT2G40290
uniprot id: A0A178VYF4
uniprot id: A2RVK1
uniprot id: Q9SIZ2
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the eIF-2-alpha family.
messages: Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.
messages: Heterotrimer composed of an alpha, a beta and a gamma chain.
messages: Phosphorylated at Ser-56 by GCN2.

3702:AT5G05410
gene id: 3702:AT5G05410
uniprot id: A0A7G2FAJ0
uniprot id: A8MSB1
uniprot id: O82132
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By high-salt and drought stresses.
messages: Expressed preferentially in roots and stems, and at a lower level in leaves.
messages: Interacts with MED25 (PubMed:18552202, PubMed:21536906). Binds to DPB3-1 in the nucleus during heat-stress (PubMed:25490919).
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' (PubMed:11798174). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (PubMed:11798174). Promotes the expression of heat stress-inducible genes by contributing to the formation of a heat stress-specific transcriptional complex with NF-Y subunits (e.g. DPB3-1, NF-YA2 and NF-YB3) at the promoter of target genes, thus promoting heat tolerance (PubMed:25490919).
messages: Ubiquitinated by DRIP1 and DRIP2. Ubiquitination probably leads to its subsequent degradation, thus negatively regulating response to drought.

3702:AT1G70190
gene id: 3702:AT1G70190
uniprot id: A0A654EMR9
uniprot id: O04527
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL12 family.

3702:AT2G02740
gene id: 3702:AT2G02740
uniprot id: A0A178VLN3
uniprot id: Q66GR6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Whirly family.
messages: By salicylic acid (SA).
messages: Homotetramer.
messages: May be due to a competing acceptor splice site.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. In the nucleus, is recruited to a distal element upstream of the kinesin KP1 to mediate the transcriptional repression of KP1. Can bind double-stranded DNA in vivo.
messages: chloroplast

3702:AT3G16540
gene id: 3702:AT3G16540
uniprot id: A0A654FHA9
uniprot id: Q9LK71
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S1C family.
messages: Mitochondrion membrane
messages: Putative serine protease.

3702:AT2G36680
gene id: 3702:AT2G36680
uniprot id: A0A178VWM6
uniprot id: Q3EBL9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VPS37 family.
messages: Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs) (By similarity).
messages: Component of the endosomal sorting required for transport complex I (ESCRT-I), composed of ELC, VPS28 and VPS37. Interacts with ELC.
messages: Endosome
messages: May be due to a competing acceptor splice site.

3702:AT5G36150
gene id: 3702:AT5G36150
uniprot id: Q9LVY2
names: Function
names: Similarity
messages: Belongs to the terpene cyclase/mutase family.
messages: Converts oxidosqualene to tirucalladienol.

3702:AT1G53990
gene id: 3702:AT1G53990
uniprot id: Q9SYF5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G60010
gene id: 3702:AT3G60010
uniprot id: A0A178VIM9
uniprot id: Q9M1X5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.
messages: Mostly expressed in inflorescences, and, to a lower extent, in seedlings and siliques. Also detected in cotyledons, leaves, pollen and seeds.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with ADO3/FKF1, EBF1, PP2A13, SKIP15, SKIP16, CPR1/CPR30, At1g55000, At3g61590, At1g67340, At1g78100, At3g04660, At4g38940, At4g39550 and At5g49610.
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.

3702:AT3G57030
gene id: 3702:AT3G57030
uniprot id: Q4V3D9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the strictosidine synthase family.
messages: Vacuole

3702:AT5G11060
gene id: 3702:AT5G11060
uniprot id: A0A178UC59
uniprot id: P48001
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TALE/KNOX homeobox family.
messages: May form heterodimeric complex with the TALE/BELL proteins (By similarity). Interacts with OFP1, OFP2, OFP4 and OFP12 (PubMed:15781858). Interacts with KNATM-B (PubMed:18398054).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G62800
gene id: 3702:AT1G62800
uniprot id: A0A1P8APT9
uniprot id: F4I0D4
uniprot id: P46646
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Cytoplasm
messages: Homodimer.
messages: Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.
messages: In eukaryotes there are cytoplasmic, mitochondrial and chloroplastic isozymes.

3702:AT4G08480
gene id: 3702:AT4G08480
uniprot id: O81472
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
messages: Down-regulated by MPK4.
messages: Expressed at least in rosette leaves (at protein level).
messages: Interacts with MPK4.
messages: No visible phenotype (PubMed:20668060, PubMed:23695980). Suppresses the cell death and defense responses not only in mkk1 mkk2 but also in mekk1 and mpk4 mutants (PubMed:22643122, PubMed:23695980). In the triple mutant mekk1 mekk2 mekk3, no apparent phenotype, but meek1-like dwarf phenotype when complemented by MEKK2 (PubMed:23695980). The triple mutant mekk1 mekk2 mekk3 is almost insensitive to external glutamate (L-Glu) on root growth (PubMed:23574009).
messages: Phosphorylated by MPK4 upon treatment with flg22.
messages: Triggers SUMM2-mediated immune responses, including cell death and defense responses. Probably inhibited by the MEKK1-MKK1/ MKK2-MPK4 kinase cascade to adjust plant defense (PubMed:22643122, PubMed:23695980). Seems to contribute in transducing external glutamate (L-Glu) signal that elicits large-scale changes in root architecture (PubMed:23574009).

3702:AT1G23250
gene id: 3702:AT1G23250
uniprot id: A0A1P8ATG9
uniprot id: F4I4P8
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the caleosin family.
messages: Lipid droplet
messages: The proline-knot motif (79-88) may be involved in targeting to lipid bodies.
messages: Transmembrane regions are predicted by sequence analysis tools, but these regions probably constitute hydrophobic domains associated to phospholipids.

3702:AT3G25280
gene id: 3702:AT3G25280
uniprot id: Q9LSE8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in siliques.
messages: Involved in abscisic acid transport.
messages: Membrane

3702:AT2G40330
gene id: 3702:AT2G40330
uniprot id: A0A178VRV8
uniprot id: Q8S8E3
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Membrane
messages: Monomer (PubMed:21658606). Homodimer. Binds ABA on one subunit only (By similarity). Interacts with HAB1, ABI1 and ABI2, and possibly with other PP2Cs (PubMed:19624469, PubMed:19874541, PubMed:19898420). Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus. Interacts directly with CAR1 and CAR4 (PubMed:25465408). Interacts with MYC2 in the nucleus. Interaction with MYC2 is increased in the presence of abscisic acid (PubMed:27357749).
messages: No visible phenotype under normal growth conditions, but mutant seedlings exhibit increased sensitivity to abscisic acid-induced inhibition of cotyledon expansion. The inhibition effect is more severe with the combination of abscisic acid and jasmonate.
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) in an ABA-independent manner but more efficiently when activated by ABA (PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015). May link ABA and jasmonate signaling pathways by modifying MYC2 transcriptional activity, and regulation of JAZ6 and JAZ8 gene expression by MYC2 (PubMed:27357749).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT1G17550
gene id: 3702:AT1G17550
uniprot id: A0A178WLC3
uniprot id: Q9LNP9
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Expressed in seeds.
messages: Interacts with PYL13.
messages: Key component and repressor of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as stomatal closure, seed germination and inhibition of vegetative growth.
messages: Repressed by MYB44. Induced by ABA.

3702:AT5G52750
gene id: 3702:AT5G52750
uniprot id: Q9LTE2
names: Caution
names: Function
names: Induction
names: Similarity
messages: Belongs to the HIPP family.
messages: Contains an apparent HMA-like domain but lacks the core conserved Cys-X-X-Cys motif.
messages: Probable heavy-metal-binding protein.
messages: Up-regulated by cadmium.

3702:AT5G59950
gene id: 3702:AT5G59950
uniprot id: A0A178U8W3
uniprot id: Q8L773
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ALYREF family.
messages: Export adapter involved in nuclear export of spliced and unspliced mRNA.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus
messages: nucleoplasm

3702:AT1G69200
gene id: 3702:AT1G69200
uniprot id: F4I0K2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the carbohydrate kinase PfkB family.
messages: Interacts with CITRX/TRXz (PubMed:20511297). Binds to FLN1 and PTAC5. Associates with the plastid-encoded RNA polymerase (PEP) complex (PubMed:24019900).
messages: Plants display chlorosis prior to leaf expansion, but exhibit slow greening, remain autotrophic, can grow to maturity, and set viable seed (PubMed:22770232). Albino phenotype of seedlings grown on sucrose-free medium associated with reduced plastid-encoded RNA polymerase (PEP)-dependent gene expression and altered chloroplast development. Delayed greening of seedlings grown on sucrose-containing medium (PubMed:24019900).
messages: RNAi plants display abnormal plastids lacking internal membrane structures.
messages: Required for proper chloroplast development, most likely through regulating plastid-encoded polymerase (PEP) dependent chloroplast transcription. Acts as a component of the transcriptionally active plastid chromosome that is required for plastid gene expression.
messages: chloroplast

3702:AT5G41080
gene id: 3702:AT5G41080
uniprot id: Q9FLM1
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: By phosphate starvation.
messages: Expressed in roots, shoots, flowers and siliques.

3702:AT1G28040
gene id: 3702:AT1G28040
uniprot id: Q9C7E9
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT2G32730
gene id: 3702:AT2G32730
uniprot id: A0A5S9X3M3
uniprot id: O48844
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the proteasome subunit S1 family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700).
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Ubiquitous with highest expression in flowers.

3702:AT1G25490
gene id: 3702:AT1G25490
uniprot id: Q38845
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit A family.
messages: Each HEAT repeat appears to consist of two alpha helices joined by a hydrophilic region, the intrarepeat loop. The repeat units may be arranged laterally to form a rod-like structure (By similarity).
messages: Mostly expressed in cell-dividing tissues such as apical meristems. Ubiquitous, with higher levels in roots and flowers (at protein level).
messages: Nucleus
messages: PP2A consists of a common heterodimeric core enzyme, composed of a 36 kDa catalytic subunit (subunit C) and a 65 kDa constant regulatory subunit (subunit A), that associates with a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) and the regulatory subunits TON2. Interacts with CYP20-1/ROC7. Also interacts with phosphatidic acid (PA), a lipid signaling molecule. Interacts with CHIP. Interacts with SIC/RON3 (PubMed:26888284).
messages: The A subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of the catalytic subunit and a variable regulatory B subunit. Seems to act as a positive regulator of PP2A catalytic activity. Confers resistance to phosphatase inhibitors such as okadaic acid and cantharidin. Involved during developmental process such as seedling and floral developments, root gravitropism, and stomatal opening regulation. Involved in the regulation of auxin efflux, especially during basipetal (tips to base) auxin transport in roots, and appears to contribute to the perception of auxin efflux inhibitors such as 1-N-naphthylphthalamic acid (NPA) and to semicarbazone I (substituted phenylsemicarbazone of 2-acetylarylcarboxylic acids) (SCB-I). Modulates the magnitude of ethylene response in the hypocotyl and stem, and functions as a general positive transducer of early ABA signaling. The holoenzyme composed of PP2AA1, PP2A4 and B'ZETA or B'ETA acts as negative regulator of plant innate immunity by controlling BAK1 phosphorylation state and activation in surface-localized immune receptor complexes (PubMed:25085430).
messages: Ubiquitinated. CHIP-mediated ubiquitination enhances phosphatase activity after an abiotic stress such as low temperature or darkness.
messages: cytosol

3702:AT3G57510
gene id: 3702:AT3G57510
uniprot id: A0A178V9D7
uniprot id: O23147
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 28 family.
messages: Cytoplasm
messages: Expressed in flower buds and siliques, in the dehiscence zone of anthers (stomium cells) and maturing siliques. Expressed in stigma during pollen tube growth. Not expressed in seeds or in the floral part or leaf abscission zone but found at the junction between the seed and the funiculus at the site of seed abscission.
messages: Impaired pod shatter.
messages: Polygalacturonase involved in cell separation in the final stages of pod shatter and in anther dehiscence. Not involved in floral organ abscission.
messages: cell wall

3702:AT2G38110
gene id: 3702:AT2G38110
uniprot id: O80437
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GPAT/DAPAT family.
messages: Esterifies acyl-group from acyl-ACP to the sn-2 position of glycerol-3-phosphate, a step in cutin biosynthesis.
messages: Membrane
messages: Specifically expressed in flower buds.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.

3702:AT3G58190
gene id: 3702:AT3G58190
uniprot id: A0A178VM67
uniprot id: Q9M2J7
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: By auxin.
messages: Expressed in roots.
messages: Involved in lateral root formation. Regulated by the transcriptional activators ARF7 and ARF19.

3702:AT1G72570
gene id: 3702:AT1G72570
uniprot id: Q1PFE1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Expressed in roots, seedlings, inflorescence, and siliques. Also detected at low levels in leaves.
messages: Interacts with ANL2, HDG2 and HDG10, and possibly with GL2, HDG3, ATML1 and PDF2.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

3702:AT3G55810
gene id: 3702:AT3G55810
uniprot id: Q9M044
names: Similarity
messages: Belongs to the pyruvate kinase family.

3702:AT4G18130
gene id: 3702:AT4G18130
uniprot id: P42498
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the phytochrome family.
messages: Contains one covalently linked phytochromobilin chromophore.
messages: Homodimer.
messages: Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion.

3702:AT1G04040
gene id: 3702:AT1G04040
uniprot id: A0A178WEF3
uniprot id: Q9ZWC4
names: Function
names: Similarity
messages: Belongs to the APS1/VSP family.
messages: May function as somatic storage protein during early seedling development.

3702:AT5G17810
gene id: 3702:AT5G17810
uniprot id: A0A178U995
uniprot id: A0A1P8BCH3
uniprot id: Q8GY25
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WUS homeobox family.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor which may be involved in developmental processes.

3702:AT4G31800
gene id: 3702:AT4G31800
uniprot id: A0A1P8B913
uniprot id: F4JSS8
uniprot id: Q0WTZ3
uniprot id: Q9C5T4
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-a family.
messages: By salicylic acid and pathogens.
messages: Constitutive expression at high level causes severe abnormality in plant growth.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Positively modulates defense-related gene expression and disease resistance.

3702:AT1G14290
gene id: 3702:AT1G14290
uniprot id: A0A178WPE2
uniprot id: A0A1P8APD5
uniprot id: Q9AST3
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Endoplasmic reticulum membrane
messages: Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Can use C18- and C20-sphinganine as substrates to produce C18- and C20-phytosphinganines (D-ribo-2-amino-1,3,4-trihydroxyoctadecane and -eicosane).
messages: No visible phenotype; due to the redundancy with SBH1. Sbh1 and sbh2 double mutants are severely dwarfed, do not progress from vegetative to reproductive growth and have enhanced expression of programmed cell death associated-genes.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.
messages: Ubiquitous, with higher levels in flowers and roots.

3702:AT5G61580
gene id: 3702:AT5G61580
uniprot id: A0A178UCI3
uniprot id: Q9FKG3
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Allosterically activated by AMP.
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Expressed in leaves, stems and flowers.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: chloroplast

3702:AT1G07745
gene id: 3702:AT1G07745
uniprot id: A0A1P8AT83
uniprot id: A0A654E7Y7
uniprot id: A3QS62
uniprot id: A3QS64
uniprot id: A8MSF8
uniprot id: Q9LQQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family. RAD51 subfamily.
messages: Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents.
messages: Nucleus

3702:AT5G57150
gene id: 3702:AT5G57150
uniprot id: A0A1P8BCX2
uniprot id: F4KAJ4
uniprot id: F4KAJ5
uniprot id: Q2HIV9
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT4G23790
gene id: 3702:AT4G23790
uniprot id: A0A178UXI7
uniprot id: A0A346P849
uniprot id: Q8H1R3
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT4G26483
gene id: 3702:AT4G26483
uniprot id: F4JUZ6
names: Function
names: Similarity
messages: Belongs to the nicotianamine synthase (NAS)-like family.
messages: Synthesizes nicotianamine, a polyamine which serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.

3702:AT5G12910
gene id: 3702:AT5G12910
uniprot id: A0A5S9Y4A3
uniprot id: Q9LXU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity).
messages: Expressed in roots, seedlings, leaves buds and open flowers.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA (By similarity).

3702:AT2G27580
gene id: 3702:AT2G27580
uniprot id: A0A178VV29
uniprot id: Q9ZNU9
names: Function
messages: May be involved in environmental stress response.

3702:AT2G36740
gene id: 3702:AT2G36740
uniprot id: A0A1P8AZV3
uniprot id: A0A5S9X4Q4
uniprot id: F4IP06
names: Function
names: Similarity
names: Subunit
messages: Belongs to the VPS72/YL1 family.
messages: Component of the SWR1 chromatin-remodeling complex composed of at least ARP6/ESD1/SUF3, PIE1, SWC6, SWC2 and H2AZs (HTA8, HTA9, HTA11). Interacts directly with SWC6 and H2AZs, but not with ARP6.
messages: Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling.

3702:AT5G44582
gene id: 3702:AT5G44582
uniprot id: A8MRU6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation.
messages: Cell membrane
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mostly expressed in seedlings shoots and roots, and, to a lower extent, in leaves.
messages: apoplast

3702:AT1G65990
gene id: 3702:AT1G65990
uniprot id: A0A178W9X6
uniprot id: Q7G959
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the peroxiredoxin family. Prx5 subfamily.
messages: Monomer.
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this 1-Cys peroxiredoxin, no C(R) is present and C(P) instead forms a disulfide with a cysteine from another protein or with a small thiol molecule. C(P) is reactivated by glutathionylation and subsequent reduction by glutaredoxin (Grx), or by thioredoxin (Trx).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides (By similarity). May be involved in intracellular redox signaling (Probable).

3702:AT3G56510
gene id: 3702:AT3G56510
uniprot id: A0A5S9XM27
uniprot id: Q6NM71
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ESF2/ABP1 family.
messages: nucleolus

3702:AT1G18220
gene id: 3702:AT1G18220
uniprot id: Q3ED99
names: Caution
names: Tissue Specificity
messages: Could be the product of a pseudogene. Truncated purine permease that is probably not expressed.
messages: Not detected in seedlings, leaves, embryos or root and shoot meristems.

3702:AT4G14850
gene id: 3702:AT4G14850
uniprot id: Q0WSH6
names: Function
names: Similarity
messages: Acts as a regulatory factor of isoprenoid biosynthesis. Could bind RNA.
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT5G10400
gene id: 3702:AT5G10400
uniprot id: A0A384L1I5
uniprot id: P59226
uniprot id: Q0WRA9
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Can be acetylated to form H3K9ac, H3K14ac, H3K18ac and H3K23ac. H3K9ac could compete with H3K9me and prevent gene silencing. H3K9acK14ac molecules are 30-fold less abundant than H3K9ac or H3K14ac. Very low level of H3K9meK14ac. H3K14 is specifically acetylated by HAG1 and deacetylated by HDA6. H3K9ac is deacetylated by HDT1. H3K9ac is restricted to euchromatin. H3K18ac, but not H3K9ac, is cell-cycle dependent and linked to replication. Reduced H4R3me2s increases H3K14ac in the FLC chromatin and activates or maintains its transcription. Vernalization decreases H3K9/14ac in the promoter region of FLC.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Expressed during the S phase.
messages: Expressed in inflorescences, buds and seedlings.
messages: In meta- and anaphase, H3T11ph is found on the entire length of the condensed chromosomes, whereas H3S10ph and H3S28ph are confined to the pericentromeric regions. During the first meiotic division, H3S10ph and H3S28ph are found on the entire length of the chromosome. Both sites may be involved in sister chromatid cohesion. No phosphorylation detected during interphase. AUR1 and AUR2 phosphorylate only H3S10, while AUR3 phosphorylates both H3S10 and H3S28.
messages: Mono-, di- or trimethylated to form mainly H3K4me1/2/3, H3K9me1/2/3, H3K27me1/2/3 and H3K36me1/2/3. Very low monomethylation at H3K18me1 or H3K23me1. H3K4me1/2/3, H3K9me3, H3K27me3 and H3K36me1/2/3 are typical marks for euchromatin, whereas heterochromatic chromocenters are enriched in H3K9me1/2 and H3K27me1/2. H3K27me3 is largely restricted to the transcribed regions of single genes and not associated with low-nucleosome density regions. SUVR1 to SUVR5, ASHH1 to ASHH3, ASHR1 to ASHR3, and ATXR5 and ATXR6 methylate H3, with ASHH2 methylating specifically H3K4 and H3K36 and ATXR5 and ATXR6 monomethylating specifically H3K27me1 (PubMed:35298257). The Su(var)3-9 homolog proteins (SUVH1 to SUVH10) are H3K9-specific methyltransferases. Among them, KRYPTONITE (SUVH4) is only involved in di- or trimethylation. Regarding H3K9, the major forms are H3K9me1 (20%) and H3K9me2 (10%), while H3K9me3 is rare (0.2%). H3K9me is controlled by DNA methylation and is not required for the formation of constitutive heterochromatin, but double methylation H3K9meK27me is required for the recruitment of CMT3 to methylate heterochromatin and silence euchromatic loci. Very low level of H3K9meK14ac. 60% of H3K27 is found under the form of H3K27me1, 16% of H3K27me2 and 5% of H3K27me3. When associated with H3K27me, H3K36 can only be mono- or di-methylated. H327me2K36me1 or H3K27me1K36me2 are both found in 3% of the proteins. When not associated with H3K27me, H3K36 is only trimethylated. H3K36me3 is found in 3% of the proteins. H2BK143ub1 is probably prerequisite for H3K4me. Elevated H3K4me3 and H3K36me2 formed by ASHH2 are required for high FLC expression. Vernalization increases H3K9me2 and H3K27me2/3 and decreases H3K4me2 at the FLC locus, resulting in the epigenetic silencing of this floral repressor.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. The H3K9meK27me dimethylated N-terminal tail of histone H3 can directly interact with the chromodomains of CMT3 and/or LHP1 (PubMed:11898023, PubMed:15457214). Interacts with ORTH2 (PubMed:17242155). Interacts (in absence of H3K27me) with TSK (PubMed:35298257).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4me1/2/3 = mono-, di- and trimethylated Lys-5; H3K9me1/2/3 = mono-, di- and trimethylated Lys-10; H3K9ac = acetylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14ac = acetylated Lys-15; H3K18ac = acetylated Lys-19; H3K18me1 = monomethylated Lys-19; H3K23ac = acetylated Lys-24; H3K23me1 = monomethylated Lys-24; H3K27me1/2/3 = mono-, di- and trimethylated Lys-28; H3S28ph = phosphorylated Ser-29; H3K36me1/2/3 = mono-, di- and trimethylated Lys-37.

3702:AT4G25490
gene id: 3702:AT4G25490
uniprot id: B6DTR3
uniprot id: P93835
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By cold stress (PubMed:9735350). Subject to degradation by the 26S proteasome pathway in freezing conditions (PubMed:28344081).
messages: Interacts with 14-3-3 proteins GRF1, GRF3, GRF5, GRF6, GRF7, GRF9 and GRF10 in the nucleus upon freezing.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation.

3702:AT5G01220
gene id: 3702:AT5G01220
uniprot id: Q8S4F6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
messages: By phosphate depletion (PubMed:11960029). Repressed by phosphate (Pi) and phosphite (Phi), with a faster suppression in roots than in shoots (PubMed:25697796).
messages: Catalyzes the transfer of the sulfoquinovose moiety from UDP-sulfoquinovose to diacylglycerol during sulfolipid biosynthesis (PubMed:11960029). Sulfolipid contributes to maintaining a negatively charged lipid-water interface, a requirement for proper function of photosynthetic membranes (PubMed:11960029). Sulfolipid may also function as a substitute of anionic phospholipids under phosphate-limited growth conditions (PubMed:11960029).
messages: Lack of sulfolipid leading to reduced growth under phosphate-limited growth conditions.
messages: chloroplast membrane

3702:AT4G36950
gene id: 3702:AT4G36950
uniprot id: A0A178V4X4
uniprot id: Q6K1M3
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT1G74260
gene id: 3702:AT1G74260
uniprot id: Q9M8D3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Essential to the male gametophyte development. Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
messages: In the N-terminal section; belongs to the FGAMS family.
messages: Lethal to the male gametophyte.
messages: Mitochondrion
messages: chloroplast

3702:AT5G37415
gene id: 3702:AT5G37415
uniprot id: B3H4N9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G03210
gene id: 3702:AT2G03210
uniprot id: A0A1P8B2Z3
uniprot id: A0A1P8B2Z4
uniprot id: O81053
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 37 family.
messages: Expressed in roots, stems, leaves, flowers, siliques and seedlings.
messages: Golgi stack membrane
messages: May be involved in cell wall biosynthesis.
messages: May be involved in cell wall biosynthesis. May act as a fucosyltransferase.

3702:AT1G70310
gene id: 3702:AT1G70310
uniprot id: A0A384L9M6
uniprot id: O48661
uniprot id: Q5PNT7
names: Similarity
names: Subunit
messages: Belongs to the spermidine/spermine synthase family.
messages: Heterodimer. Component of a multiprotein complex. Interacts with SPMS and SPDSYN1.

3702:AT4G19035
gene id: 3702:AT4G19035
uniprot id: A0A2H1ZEN1
uniprot id: A0A654FQT6
names: Similarity
messages: Belongs to the DEFL family.

3702:AT4G38680
gene id: 3702:AT4G38680
uniprot id: Q41188
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Active in meristematic tissues. During vegetative growth, expressed in root and shoot apical regions, leaves and roots primordia, root vascular cylinder and procambium. In reproductive organs, present in developing floral meristem, meristematic tissues of young flower buds, and placentae, pollen, ovules and seeds, mostly in embryos. High expression in the earliest stage of silique development, with a decrease during the middle stages of silique development and subsequently an increase during the later stages. In mature seeds, mostly localized in hypocotyl and radicule. During seed germination, first observed in the tip of the radicule and, upon opening of the cotyledons, expressed in the radicule and hypocotyl/radicule transition zone.
messages: Belongs to the cold shock protein (CSP) family.
messages: Chaperone that binds to RNA, single- (ssDNA) and double-stranded (dsDNA) DNA, and unwinds nucleic acid duplex. Accelerates seed germination and seedling growth under cold stress, and contributes to enhancement of cold and freezing tolerance. Regulates flowering transition, and flower and seed development. Promotes seed germination under salt stress. May regulate respiratory oxygen uptake.
messages: Cytoplasm
messages: Early flowering, altered stamen number and impaired seed development.
messages: Induced by abscisic acid (ABA), transiently by ethylene, salicylic acid and water fload, but down-regulated by dehydration stress. Accumulates during cold acclimation. Accumulation during silique development is AGL15-dependent.
messages: Mostly expressed in shoot apices, seeds and siliques, and, to a lower extent, in roots, cotyledons, stems, shoots, leaves, floral buds and flowers. Present in shoot apical meristems and siliques (at protein level).
messages: nucleolus

3702:AT3G16780
gene id: 3702:AT3G16780
uniprot id: A0A654F975
uniprot id: Q9LUQ6
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL19 family.

3702:AT3G11945
gene id: 3702:AT3G11945
uniprot id: A0A178VMS7
uniprot id: F4J8K0
uniprot id: Q1ACB3
names: Activity Regulation
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family.
messages: Inhibited by haloxydine (3,5-dichloro-2,6-difluoro-4-haloxypyridine).
messages: Involved in the synthesis of plastoquinone-9. Can use both homogentisic acid and 2,5-dihydroxyphenylacetic acid gamma-lactone as prenyl acceptors, and solanesyl diphosphate > farnesyl diphosphate > geranylgeranyl diphosphate >> phytyl diphosphate as prenyl donors. Do not catalyze the decardoxylation of homogentisate uncoupled from prenylation.
messages: Seeds overexpressing HST accumulate increased levels of tocopherol.
messages: Was initially thought to have a homogentisate phytyltransferase activity and to be involved in tocopherol biosynthesis.
messages: chloroplast membrane

3702:AT4G08685
gene id: 3702:AT4G08685
uniprot id: A0A178UVW6
uniprot id: Q9SZY5
names: Similarity
messages: Belongs to the Ole e I family.

3702:AT2G01690
gene id: 3702:AT2G01690
uniprot id: A0A178VZH4
uniprot id: F4IPA6
uniprot id: Q9ZU97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VAC14 family.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14. VAC14 nucleates the assembly of the complex and serves as a scaffold (By similarity).
messages: Cytoplasm
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Regulates the synthesis of PtdIns(3,5)P2 by positive activation of FAB1 and by controlling SAC/FIG4 localization (By similarity).
messages: Vacuole membrane

3702:AT2G44340
gene id: 3702:AT2G44340
uniprot id: O64868
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: May function as positive regulator of plant growth.
messages: Nucleus
messages: Plants over-expressing VQ18 show stunted growth phenotype.

3702:AT2G25850
gene id: 3702:AT2G25850
uniprot id: A0A178VXR1
uniprot id: A0A1P8B067
uniprot id: A0A1P8B088
uniprot id: A0A384L4S8
uniprot id: O82312
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the poly(A) polymerase family.
messages: Binds 2 magnesium ions. Also active with manganese.
messages: Cytoplasm
messages: Essential protein (PubMed:19956626). Polymerase that creates the 3'-poly(A) tail of mRNA's (PubMed:15297145). Also required for the endoribonucleolytic cleavage reaction at some polyadenylation sites. May acquire specificity through interaction with a cleavage and polyadenylation specificity factor (CPSF) at its C-terminus (By similarity). Mediates the polyadenylation of RNAs that are associated with polynucleotide phosphorylase (e.g. PNP1) (PubMed:10872823).
messages: Lethal.
messages: Monomer (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits CPSF100, CPSF30, FIPS5 and PABN2 (PubMed:18479511).
messages: Mostly expressed in flowers (highly in the style, receptacle and pedicel, but weakly in the vasculature of sepals) and hypocotyls, and, to a lower extent, in roots and stems. Barely detected in leaves (petioles and vascular system) (PubMed:15297145, PubMed:19956626).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G47120
gene id: 3702:AT2G47120
uniprot id: A0A178VYF5
uniprot id: O80714
names: Caution
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35130
gene id: 3702:AT2G35130
uniprot id: O82178
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G33520
gene id: 3702:AT3G33520
uniprot id: A0A178U6Y1
uniprot id: Q8LGE3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the actin family.
messages: Belongs to the actin family. ARP6 subfamily.
messages: Component of the SWR1 chromatin-remodeling complex composed of at least ARP6/ESD1/SUF3, PIE1, SWC6, SWC2 and H2AZs (HTA8, HTA9, HTA11). Interacts directly with SWC6/SEF and PIE1. Also interacts with H2A.F/Z proteins.
messages: Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling. Binds to the promoter region of FLC chromatin. Required for the activation of FLC and FLC/MAF genes expression to levels that inhibit flowering, through both histone H3 and H4 acetylation and methylation mechanisms. Involved in several developmental processes including organization of plant organs, leaves formation, flowering time repression, and fertility. Modulates photoperiod-dependent epidermal leaves cell development; promotes cell division in long days, and cell expansion/division in short days. May be involved in the regulation of pathogenesis-related proteins (PRs).
messages: Cytoplasm
messages: Early flowering, leaf serration, production of extra petals and weak apical dominance.
messages: Mostly expressed in flowers, and, to a lower extent, in seedlings, shoot apex, stems, siliques, seeds, and roots (at protein level).
messages: Nucleus

3702:AT1G63900
gene id: 3702:AT1G63900
uniprot id: A0A5S9WS89
uniprot id: F4I570
uniprot id: Q8L7N4
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Auto-ubiquitinated.
messages: By infection with the bacterial pathogen Pseudomonas syringae pv. tomato, and treatment with fumonisin B1, a mycotoxin inducing apoptosis-like programmed cell death (PCD).
messages: E3 ubiquitin-protein ligase involved in the regulation of protein import in the chloroplast. Associates with TOC complexes and mediates ubiquitination of TOC components, promoting their degradation via the ubiquitin-proteasome system (UPS). Plays a role in the reorganization of the TOC machinery. Involved in a mechanism that regulates plastid biogenesis via UPS (PubMed:23118188). Promotes stress tolerance by depleting the chloroplast protein import apparatus, which limits photosystem assembly and the potential for reactive oxygen species (ROS) formation (PubMed:26387714). May act as negative regulator of programmed cell death (PCD) during biotic stress (PubMed:20972793).
messages: Interacts with TOC33, TOC75-3 and TOC159.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants show increased disease symptoms and cell death after inoculation with an avirulent strain of Pseudomonas syringae pv. tomato DC3000 (PubMed:20972793). Pale-green phenotype with low survival rates during de-etiolation (PubMed:23118188). Hypersensitivity to salt, osmotic, and oxidative stresses (PubMed:26387714).
messages: The zinc finger domain is required for E3 ligase activity.
messages: chloroplast outer membrane

3702:AT5G44780
gene id: 3702:AT5G44780
uniprot id: O48582
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MORF family.
messages: Heterodimers with MORF8/RIP1, MORF1/RIP8 and MORF3/RIP3.
messages: Involved in organellar RNA editing. Required for the processing of few RNA editing site in mitochondria.
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions.

3702:AT1G78280
gene id: 3702:AT1G78280
uniprot id: A0A5S9WVF0
uniprot id: Q9M9E8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: May function as histone H3 lysine demethylase and be involved in regulation of gene expression.
messages: Mostly expressed in leaves, and, to a lower extent, in inflorescences, roots, siliques and stems.
messages: Nucleus

3702:AT5G13820
gene id: 3702:AT5G13820
uniprot id: Q9FFY9
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds specifically to the plant telomeric double-stranded DNA sequences 5'-TTTAGGG-3'. At least 2 repeats of telomeric sequences are required for binding. Induces DNA bending.
messages: By salt stress.
messages: Expressed ubiquitously. Highest expression in flowers and roots.
messages: Homomultimer. Interacts with SNL1 (via PAH2). Interacts with STO.
messages: Nucleus
messages: The Myb-extension domain (593-622) is critical for telomere binding.
messages: Viable, but deregulation of telomere length control.

3702:AT3G49900
gene id: 3702:AT3G49900
uniprot id: A0A5S9XJE4
uniprot id: F4IZ87
uniprot id: Q9M2W8
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT3G59760
gene id: 3702:AT3G59760
uniprot id: B9DFR6
uniprot id: F4J9F7
uniprot id: Q0WWQ5
uniprot id: Q43725
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a cysteine synthase. Plays a role in the sulfide detoxification in mitochondria.
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.
messages: Homodimer (By similarity). Interacts with SAT3. Component of the cysteine synthase complex (CSC) composed of two OAS-TL dimers and one SAT hexamer.
messages: Mitochondrion
messages: No visible phenotype but displays lower levels of thiols in roots (PubMed:18024555). Growth retardation (PubMed:18223034). Defects in root hair formation (PubMed:22511607).

3702:AT4G25630
gene id: 3702:AT4G25630
uniprot id: A0A178UZ20
uniprot id: Q94AH9
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Baeckstroem et al identified FIB2 in a Mediator complex pull-down assay and suggested that FIB2 could be a plant specific component of the Mediator complex (PubMed:17560376). However, no experimental evidence has been brought so far to confirm this hypothesis (Probable).
messages: Belongs to the methyltransferase superfamily. Fibrillarin family.
messages: Component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles (By similarity). Interacts with groundnut rosette virus long-distance movement protein; this interaction is required for virus long-distance movement protein transiting through host Cajal body and nucleolus, relocalization of fibrillarin to the cytoplasm, and in presence of viral RNA, leads to the formation of stable RNPs (PubMed:17576925). Interacts (via GAR domain) with the hordeivirus TGB1 movement protein (via the first 82 amino acid residues) (PubMed:22349738). Interacts with PRMT11 and PRMT12 (PubMed:17666011). Interacts with MED19A (PubMed:30307032).
messages: Expressed in roots and flowers (PubMed:10829025, PubMed:10806224). Expressed in leaves and stems (PubMed:10806224). Expression levels decrease during aging (PubMed:10806224).
messages: Methylated by PRMT11 and PRMT12.
messages: Repressed by abscisic acid (ABA).
messages: S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins (Probable). Involved in pre-rRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in pre-ribosomal RNA (Probable). Site specificity is provided by a guide RNA that base pairs with the substrate (Probable). Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (Probable). Also acts as a protein methyltransferase by mediating methylation of 'Gln-105' of histone H2A (H2AQ105me), a modification that impairs binding of the FACT complex and is specifically present at 35S ribosomal DNA locus (By similarity). Acts as negative regulator of expression of immune responsive genes, including pathogenesis-related gene 1 (PR1), and of resistance against bacterial pathogen (PubMed:30307032). Binds to MED19A, a positive regulator of PR1 expression, to repress the activator activity of MED19A (PubMed:30307032). In response to the bacterial pathogen-associated molecular pattern (PAMP) elf18, associates with the long non-coding RNA (lncRNA) ELENA1 (At4g16355), and releases its repression of MED19A (PubMed:30307032). Possesses ribonuclease activity toward rRNA in vitro (PubMed:29163603). Binds phosphoinositides, phospholipids and phosphatidic acid in vitro (PubMed:29163603).
messages: The N-terminal DMA/Gly-rich region (also called GAR domain) is rich in Gly and Arg and functions in nucleolar targeting (By similarity). The central (138-179) and C-terminal (225-281) part of the protein exhibit cooperative RNA-binding activities.
messages: nucleolus

3702:AT5G61350
gene id: 3702:AT5G61350
uniprot id: Q9FLJ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT3G22110
gene id: 3702:AT3G22110
uniprot id: A0A178VJ65
uniprot id: O81148
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Ubiquitous low levels, higher expression in siliques and flowers.

3702:AT3G13682
gene id: 3702:AT3G13682
uniprot id: A0A5S9XCC8
uniprot id: Q9LID0
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the flavin monoamine oxidase family.
messages: Expressed in the shoot and root apical regions of young seedlings. Expressed in inflorescences.
messages: Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA (PubMed:17921315). Seems to act in partial redundancy with FLOWERING LOCUS D (FLD) to repress FLC expression (PubMed:17921315). Required for cytosine methylation of FWA (PubMed:17921315). Controls primary seed dormancy by regulating DOG1 and abscisic acid signaling-related genes (PubMed:25852712).

3702:AT5G14170
gene id: 3702:AT5G14170
uniprot id: Q9FMT4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SMARCD family.
messages: Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology).
messages: Nucleus
messages: Part of a SWI-SNF complex.

3702:AT2G02955
gene id: 3702:AT2G02955
uniprot id: Q5XVF0
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although it shares weak sequence similarity with GTF2B/TFIIB, displays a similar subdomain organization as GTF2B/TFIIB, with a N-terminal zinc finger, a connecting region (composed of B-reader and B-linker regions), followed by 2 cyclin folds.
messages: Belongs to the RRN7/TAF1B family.
messages: Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). Required for the development of the one-cell zygote and endosperm in embryos (PubMed:15634699). Required for micropylar pollen tube guidance, but has no effect on ovule development and gametophytic cell fate specification (PubMed:18055609). May regulate the transcription of secreted cysteine-rich peptide (CRP) genes in the embryo sac (PubMed:26462908).
messages: Disrupted function of the female gametophyte. Defective in micropylar pollen tube guidance leading to zygotic lethality.
messages: Expressed at high levels in seedlings, inflorescences and young siliques and at lower levels in roots. Not detected in leaves and stems. Detected in root tips and shoot apical meristems, in anthers, primarily in microspores with weaker expression in mature pollen grains and in the central cell of the mature female gametophyte. Not expressed in synergids, egg cells, antipodal cells, endosperm cells and fertilized egg cells.
messages: Expression in central cell of the mature female gametophyte is pollination independent.
messages: Expression of MEE12 in the central cell alone is sufficient to restore the normal pollen tube guidance phenotype.
messages: Interacts with TFIIF (PubMed:18055609, PubMed:26462908). Interacts with MEE14/CBP1, TBP1 and NRPB1 (via CTD) (PubMed:26462908).
messages: Nucleus
messages: nucleolus

3702:AT1G74650
gene id: 3702:AT1G74650
uniprot id: A0A384KT80
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G61470
gene id: 3702:AT3G61470
uniprot id: A0A654FJS0
uniprot id: Q9SYW8
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: Depletion of LHCA3 levels (at protein level).
messages: Induced by low light (LL) but repressed by high light (HL). Inhibited by cold.
messages: Photoregulated by reversible phosphorylation of its threonine residues.
messages: The LHC complex consists of chlorophyll a-b binding proteins (PubMed:19139095). Red-emitting heterodimers with LHCA3 and LHCA5 (PubMed:17107674, PubMed:21083539, PubMed:15356385). Binds to carotenoids (PubMed:17326666).
messages: The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated, here photosystem I.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT4G09350
gene id: 3702:AT4G09350
uniprot id: Q9SMS0
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Malfunction of the NDH complex.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (Probable). Required for the accumulation of both the NDH subcomplex A and NDHS (PubMed:21505067).
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits (PubMed:21785130). Component of the electron donor-binding subcomplex, at least composed of NDHS, NDHT and NDHU (PubMed:21505067, PubMed:24225949).
messages: chloroplast thylakoid membrane

3702:AT5G65495
gene id: 3702:AT5G65495
uniprot id: Q8GWU7
names: Subunit
messages: Interacts with SPK1B/ASK2.

3702:AT5G63970
gene id: 3702:AT5G63970
uniprot id: Q8RX26
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Induced by the mycotoxin fumonisin B1.
messages: Interacts with UBC30, GRXS17 and GLB3 (PubMed:27497447). Binds to and coactivates GAF1/IDD2 and ENY/IDD1 (PubMed:25035403).
messages: No visible phenotype under normal growth conditions. The double mutant plants rglg3 and rglg4 show decreased sensitivity to jasmonate.
messages: Nucleus
messages: Possesses E3 ubiquitin-protein ligase in vitro. Acts as upstream modulator of jasmonate (JA) signaling in response to various stimuli, such as JA-inhibited root growth, JA-inductive gene expression, coronatine-mediated pathogen susceptibility, wound-stimulated expression of JA-responsive genes and wound-induced JA biosynthesis (PubMed:22898498). Controls fumonisin B1 (FB1)-triggered programmed cell death (PCD) by modulating the JA signaling pathway. May mediate salicylic acid (SA) suppression of JA signaling in FB1-induced responses (PubMed:25788731). May mediate the formation of 'Lys-48'-linked multiubiquitin chains. Mediates the polyubiquitination and subsequent proteasomal degradation of the target protein GRXS17 (PubMed:27497447).
messages: Widely expressed.

3702:AT1G13040
gene id: 3702:AT1G13040
uniprot id: Q9SAD9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G04990
gene id: 3702:AT1G04990
uniprot id: Q94AD9
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Possesses RNA-binding and ribonuclease activities in vitro.

3702:AT2G47570
gene id: 3702:AT2G47570
uniprot id: O22254
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL18 family.

3702:AT4G17770
gene id: 3702:AT4G17770
uniprot id: A0A384LAK9
uniprot id: O23617
uniprot id: W8PUL2
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: 2-deoxyglucose, but not phenformin, enhances the phosphorylation of TPS5.
messages: 90-fold induction by sucrose after 24 hours and by heat stress.
messages: Binds to the phosphopeptide-binding site of GRF/14-3-3 and to MBF1c.
messages: Both Ser-5 and Thr-32 must be phosphorylated for binding to GRF/14-3-3.
messages: In the C-terminal section; belongs to the trehalose phosphatase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 20 family.
messages: Low expression in leaves, stems, flower buds, flowers and siliques.

3702:AT3G21060
gene id: 3702:AT3G21060
uniprot id: A0A7G2EK45
uniprot id: Q5E915
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Eearly flowering (PubMed:23284292). Significantly reduced trimethylated 'Lys-4' of histone H3 (H3K4me3) levels at the 5'-ends of WRKY70 and LTP7 genes leading to reduced transcript accumulation (PubMed:23284292).
messages: Nucleus
messages: Part of a complex composed of TRO, RBL and WDR5A. Interacts with TRO and WDR5A, but not with WDR5B. This complex is formed during both vegetative and reproductive development.
messages: Promotes the expression of FLC and FLC homologs to repress the floral transition (PubMed:21423667). Promotes WRKY70 and LTP7 genes epigenetic methylation (e.g. H3K4me3) and subsequent expression (PubMed:23284292).
messages: Strongly expressed in root tips, shoot apices, vascular tissues, developing embryos and endosperms.

3702:AT1G80420
gene id: 3702:AT1G80420
uniprot id: A0A654EQQ4
uniprot id: Q24JK4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Corrects defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents (By similarity). Involved in DNA demethylation pathway by stimulating cytosine methylation (5-meC) excision, gap tailoring, and DNA ligation.
messages: Homodimer. Interacts with polynucleotide kinase (PNK), DNA polymerase-beta (POLB) and DNA ligase III (LIG3) (By similarity). Interacts with ZDP and ROS1. Binds to various forms of double-stranded DNA (e.g. methylated, unmethylated, with single-nucleotide gap flanked by 3'-phosphate or 5'-phosphate ends).
messages: Nucleus
messages: Reduced capacity to complete DNA demethylation initiated by ROS1.

3702:AT1G32090
gene id: 3702:AT1G32090
uniprot id: A0A097NUQ2
uniprot id: A0A384KC93
uniprot id: Q9FVQ5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as an osmosensitive calcium-permeable cation channel.
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Membrane

3702:AT1G51630
gene id: 3702:AT1G51630
uniprot id: A0A5S9WLD9
uniprot id: Q0WPA5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase GT106 family.
messages: Glycosyltransferase involved in mannan biosynthesis.
messages: Golgi apparatus membrane
messages: Widely expressed.

3702:AT5G13270
gene id: 3702:AT5G13270
uniprot id: Q9LYU9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: chloroplast

3702:AT1G44110
gene id: 3702:AT1G44110
uniprot id: A0A178W0H5
uniprot id: Q9C6Y3
names: Developmental Stage
names: Similarity
names: Subunit
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Expressed in the G2/M phases. Remains high in early G1 phase.
messages: Interacts with FZR2/CCS52A1, FZR1/CCS52A2 and FZR3/CCS52B.

3702:AT3G22170
gene id: 3702:AT3G22170
uniprot id: A0A178VJL5
uniprot id: Q9LIE5
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FHY3/FAR1 family.
messages: Down-regulated after exposure to far-red light. Subject to a negative feedback regulation by PHYA signaling. Up-regulated by white light.
messages: Homodimer and heterodimer with FAR1. Interacts (via N-terminus) with PIF1 and with underphosphorylated PHYA.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: Reduced protochlorophyllide levels in darkness and less photobleaching in the light.
messages: The FAR1 domain is involved in direct DNA binding, the SWIM-type zinc finger is essential for transcriptional activation activity and both the MULE and SWIM domains are essential for dimerization.
messages: Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CACGCGC-3'. Activates the expression of FHY1 and FHL involved in light responses. When associated with PHYA, protects it from being recognized and degraded by the COP1/SPA complex. Positive regulator of chlorophyll biosynthesis via the activation of HEMB1 gene expression.

3702:AT1G77090
gene id: 3702:AT1G77090
uniprot id: O49292
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbP family.
messages: chloroplast thylakoid lumen

3702:AT1G31772
gene id: 3702:AT1G31772
uniprot id: Q2V4J8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Could be the product of a pseudogene. Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G13609
gene id: 3702:AT1G13609
uniprot id: Q2V4N4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT4G01160
gene id: 3702:AT4G01160
uniprot id: A0A178UYH5
uniprot id: O04615
names: Caution
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G44440
gene id: 3702:AT5G44440
uniprot id: A0A1P8BFF2
uniprot id: Q9FI21
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: By salt stress, specifically in the root.
messages: Involved in adaptation to salt stress.
messages: No obvious developmental defects but reduced biomass and reduced leaves number. Increased sensitivity to salt stress.
messages: cell wall

3702:AT1G33100
gene id: 3702:AT1G33100
uniprot id: F4HPH2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT5G60540
gene id: 3702:AT5G60540
uniprot id: A0A178UA48
uniprot id: Q8LAD0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutaminase PdxT/SNO family.
messages: Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PDX1. Involved in the indirect resistance to singlet oxygen-generating photosensitizers.
messages: Cytoplasm
messages: Embryonic lethality when homozygous.
messages: In plants, synthesis of vitamin B6 does not involve deoxyxylulose 5-phosphate but utilizes intermediates from the pentose phosphate pathway and from glycolysis.
messages: Interacts with PDX1.1 or PDX1.3, but not with PDX1.2. Binds to RPA2A.
messages: Strongly expressed in roots, stems, leaves and flowers.
messages: Vitamin B6 is an essential quencher of singlet oxygen in plants, that can protect cellular membranes from lipid peroxidation.

3702:AT4G29600
gene id: 3702:AT4G29600
uniprot id: Q9SU87
names: Cofactor
names: Function
names: Sequence Caution
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: Sequencing errors.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

3702:AT1G68870
gene id: 3702:AT1G68870
uniprot id: A0A5S9WR10
uniprot id: Q9CA45
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SOFL plant protein family.
messages: Cytoplasm
messages: Domains SOFL-A and SOFL-B are required for function in cytokinin-mediated development.
messages: In seedlings, strong levels in the hydathode region of cotyledons as well as in the upper part of hypocotyls and weak content in the vascular tissue of cotyledons (PubMed:20011053). In developing leaves, strongly expressed in the midrib of leaf veins, but weak levels in the hydathode regions (PubMed:20011053). In developing flower buds, accumulates in pistil tips and the vascular tissue of stamens and sepals (PubMed:20011053). In mature flowers, detected in the vascular bundles between the two anther locules, the central vascular cylinders of the filaments, vascular tissues of tips of the pistils, and sepal vascular tissue (PubMed:20011053). Also present in tips and bases of developing siliques, and progressively restricted to the vascular tissues at the silique tips (PubMed:20011053).
messages: Involved in cytokinin-mediated development (PubMed:20011053, PubMed:29467189). Together with SOFL2, triggers the endogenous content of specific bioactive cytokinins derived from the biosynthetic intermediates trans-zeatin riboside monophosphate (tZRMP) and N(6)-(Delta(2)-isopentenyl)adenosine monophosphate (iPRMP) such as N-glucosides trans-zeatin 7-glucoside (tZ7G), cis-zeatin 7-glucoside (cZ7G) and N(6)-(Delta(2)-isopentenyl)adenine 7-glucoside (iP7G) (PubMed:20011053).
messages: No obvious developmental defects (PubMed:20011053). Plants missing both SOLF1 and SOLF2 have reduced endogenous cytokinin levels and accumulate lower levels of trans-zeatin riboside monophosphate (tZRMP) and N(6)-(Delta(2)-isopentenyl)adenosine monophosphate (iPRMP), biosynthetic intermediates of bioactive cytokinins as well as decreased response to exogenous cytokinin in both callus-formation and inhibition-of-hypocotyl-elongation assays (PubMed:20011053).
messages: Nucleus
messages: Predominantly expressed in the vascular tissues of seedlings, developing leaves, flowers and siliques, but barely detectable in roots and stems.

3702:AT1G22620
gene id: 3702:AT1G22620
uniprot id: A0A178WK36
uniprot id: Q7XZU3
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Golgi apparatus
messages: Phosphoinositide phosphatase which catalyzes the hydrolysis of phosphatidylinositol-3,5-bisphosphate (PtdIns(3,5)P2) (PubMed:15805481). Can also catalyze the hydrolysis of phosphatidylinositol 3-phosphate (PtdIns(3)P) and phosphatidylinositol 4-phosphate (PtdIns(4)P) (By similarity). Required for normal cell morphogenesis, cell wall synthesis, and actin organization (PubMed:15805481).
messages: The phosphatase catalytic core motif (or RXNCXDCLDRTN motif) from the SAC domain is found in metal-independent protein phosphatases and inositol polyphosphate phosphatases.
messages: Ubiquitous with higher expression level in both young elongating and nonelongating stems. Detected in vascular tissues.
messages: Vacuole membrane

3702:AT1G78710
gene id: 3702:AT1G78710
uniprot id: A0A654EQ50
uniprot id: Q9ZV89
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT4G36890
gene id: 3702:AT4G36890
uniprot id: A0A384KJH8
uniprot id: Q8L707
uniprot id: W8Q2W9
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 43 family.
messages: Expressed in developing interfascicular fibers and xylem cells in stems and developing secondary xylem in roots.
messages: Expressed in the seed coat at the linear cotyledon and mature green stages, when mucilage synthesis occurs.
messages: Golgi apparatus membrane
messages: Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.
messages: Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls (PubMed:17944810, PubMed:20595206, PubMed:20335400, PubMed:20424005). Involved in the elongation of glucuronoxylan xylosyl backbone (PubMed:17944810, PubMed:20595206, PubMed:20335400, PubMed:20424005). Xylan xylosyltransferase that acts cooperatively with IRX9 to achieve the successive addition of xylosyl residues during xylan backbone elongation (PubMed:22080591, PubMed:25118690). Required for the proper composition and structural properties of released seed coat mucilage (PubMed:26482889, PubMed:26834178). Required for the production of highly branched xylan polymers in seed coat mucilage (PubMed:26482889, PubMed:26834178). Xylan with xylose side chains seems to be necessary for pectin attachment to the seed surface (PubMed:26482889, PubMed:26834178). Together with MUCI70, required for xylan and pectin synthesis in seed coat epidermal (SCE) cells (PubMed:26482889, PubMed:26834178, PubMed:30228108).
messages: Membrane
messages: Reduced xylan content in cell wall (PubMed:17944810). Reduced amount and altered composition of seed coat mucilage (PubMed:26482889, PubMed:26834178). Plants missing both MUCI70 and IRX14 exhibit a severe reduction in both xylan- and pectin-related sugars in total seed mucilage extracts (PubMed:30228108).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G56690
gene id: 3702:AT3G56690
uniprot id: Q9LET7
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the AAA ATPase family.
messages: Expressed in the whole plant.
messages: Interacts with CAM2.

3702:AT1G10060
gene id: 3702:AT1G10060
uniprot id: A0A1P8APA3
uniprot id: A0A1P8APA5
uniprot id: A0A1P8APB7
uniprot id: A0A1P8APE4
uniprot id: B3H7M6
uniprot id: B9DFH1
uniprot id: F4I2Q0
uniprot id: Q93Y32
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Branched-chain amino acids are synthesized in chloroplasts, whereas the degradation takes place in mitochondria.
messages: Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity).
messages: Mitochondrion

3702:AT5G09460
gene id: 3702:AT5G09460
uniprot id: Q9FY69
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT2G38230
gene id: 3702:AT2G38230
uniprot id: A0A178VZ00
uniprot id: O80448
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PdxS/SNZ family.
messages: Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by PDX2. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Also plays an indirect role in resistance to singlet oxygen-generating photosensitizers.
messages: Cytoplasm
messages: Expressed in flowers, shoots, leaves and weakly in roots.
messages: Homodimer or heterodimer with PDX1.2 or PDX1.3. Interacts with PDX2.
messages: Vitamin B6 is an essential quencher of singlet oxygen in plants, that can protect cellular membranes from lipid peroxidation.

3702:AT1G26810
gene id: 3702:AT1G26810
uniprot id: A0A178WHF1
uniprot id: Q8L7F9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of N-glycans containing Lewis a structures (with the combination of FUT13).
messages: Expressed in stems and siliques.
messages: Golgi apparatus membrane
messages: Interacts with GMII.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G41410
gene id: 3702:AT2G41410
uniprot id: A0A178VYJ0
uniprot id: P30188
names: Caution
names: Function
names: Induction
messages: Although assigned as a calmodulin family member by Ref.6, it only contains EF-hand domains.
messages: During darkness conditions.
messages: Potential calcium sensor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G62500
gene id: 3702:AT1G62500
uniprot id: Q9SXE7
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT4G39860
gene id: 3702:AT4G39860
uniprot id: A0A178UXJ5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G71750
gene id: 3702:AT1G71750
uniprot id: A0A178WFM2
uniprot id: F4IA25
uniprot id: Q8L8L7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

3702:AT1G43100
gene id: 3702:AT1G43100
uniprot id: Q9C8C2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G39340
gene id: 3702:AT5G39340
uniprot id: A0A178URE5
uniprot id: A0A1P8BBL0
uniprot id: A0A1P8BBL2
uniprot id: Q9SAZ5
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt, cold and drought stress.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.
messages: Histidine-containing phosphotransfer domain (HPt) contains an active histidine that mediates the phosphotransfer.
messages: Interacts with the B-type response regulators ARR1, ARR2 and ARR9. Binds to ETR1, AHK2, AHK3, AHK4, AHK5 and CKI1.
messages: Nucleus
messages: Strongly expressed in roots. Detected also in flowers, leaves, siliques and stems.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.
messages: cytosol

3702:AT5G61830
gene id: 3702:AT5G61830
uniprot id: A0A384KQ31
uniprot id: Q501A2
names: Caution
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G66470
gene id: 3702:AT5G66470
uniprot id: A0A178U8I7
uniprot id: Q8VZ74
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
messages: Nuclear genome-encoded probable GTPase involved in ribosome biogenesis in chloroplasts. Plays a role in 16S rRNA maturation in plastids and may contribute to the assembly of the small (30S) ribosomal subunit.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast nucleoid

3702:AT3G48570
gene id: 3702:AT3G48570
uniprot id: A0A384L6E4
uniprot id: Q2HIR4
uniprot id: Q9SMP2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Endoplasmic reticulum membrane
messages: Heterotrimeric complex composed of SEC61-alpha, SEC61-beta and SEC61-gamma.
messages: Membrane
messages: Necessary for protein translocation in the endoplasmic reticulum.

3702:AT2G38480
gene id: 3702:AT2G38480
uniprot id: A0A178VRT0
uniprot id: Q8LE26
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT4G11760
gene id: 3702:AT4G11760
uniprot id: Q9T0E3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G19760
gene id: 3702:AT3G19760
uniprot id: Q94A52
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Functions as host RNA helicase that is co-opted by the tombusvirus (TBSV) RNA replication enhancer to greatly enhance tombusvirus replication. Interacts with the viral minus-strand RNA and the replication proteins within the viral replicase.
messages: ATP-dependent RNA helicase. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Its RNA-dependent ATPase and RNA-helicase activities are induced by MLN51/CASC3, but abolished in presence of the MAGO-Y14 heterodimer, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The inhibition of ATPase activity by the MAGO-Y14 heterodimer increases the RNA-binding affinity of the EJC (By similarity). Plays a role in abiotic stress adaptation. Can regulate abiotic stress resistance partially via the control of acetoacetyl-CoA thiolase 2 (AC Q8S4Y1) expression (PubMed:26883227).
messages: Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily.
messages: Cytoplasm
messages: Induced by cold and heat stresses.
messages: Interacts with ALY4 (PubMed:19435936). Interacts with MAGO (PubMed:26867216). Interacts with CPL1/FRY2 (PubMed:26887918).
messages: No visible phenotype under normal growth conditions, but mutant seedlings show increased sensitivity to cold and heat stresses.
messages: Nucleus
messages: Nucleus speckle
messages: Phosphorylated at Ser-100 and Ser-101. Phosphorylation status of Ser-100 and Ser-101 largely determines the subcellular localization of EIF4A3.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: nucleolus
messages: nucleoplasm

3702:AT1G20696
gene id: 3702:AT1G20696
uniprot id: A0A178W6Y6
uniprot id: A0A1P8ATG5
uniprot id: A0A1P8ATJ7
uniprot id: A0A2H1ZEC3
uniprot id: A0A5S9VCC0
uniprot id: P93047
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HMGB family.
messages: Binds preferentially double-stranded DNA.
messages: Expressed in lateral roots, root tips, stems, cotyledons, leaves and flowers (excluding ovary and pedicels).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by cold stress, but down-regulated by drought and salt stress.
messages: cytosol

3702:AT1G54060
gene id: 3702:AT1G54060
uniprot id: Q9SYG2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Induced by seed imbibition with a peak after 1 hour and then steadily decreases to be barely detectable at day 3.
messages: Nucleus
messages: Reduced growth of leaves, petioles, stems and siliques. Delayed flowering.
messages: Transcription repressor that binds specific DNA sequence such as the GT-box-like motif 5'-CGTGATT-3' in the AT2S3 promoter. Negative regulator of seed maturation genes during seed germination and seedling development. May target GT-box-containing embryonic genes by competing with the binding of transcriptional activators to this promoter region (PubMed:19155348). Contributes to the maintenance and control of seed filling (PubMed:22231199) and may repress the maturation program during early embryogenesis (PubMed:21330492).

3702:AT3G46900
gene id: 3702:AT3G46900
uniprot id: A0A178VCX7
uniprot id: Q9STG2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.
messages: By copper deficiency. Down-regulated by treatment with high concentrations of copper.
messages: Highly expressed in leaves and at lower levels in roots, stems and flowers.
messages: Involved in the transport of copper.
messages: Membrane

3702:AT4G02410
gene id: 3702:AT4G02410
uniprot id: O81292
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.

3702:AT3G09010
gene id: 3702:AT3G09010
uniprot id: A0A1I9LME7
uniprot id: A0A384L9A3
uniprot id: Q8LF75
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT2G42330
gene id: 3702:AT2G42330
uniprot id: A0A178VSI9
uniprot id: Q9SLC6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFP11/STIP family.
messages: Identified in the spliceosome C complex.
messages: Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT3G14362
gene id: 3702:AT3G14362
uniprot id: Q6IM82
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT4G12430
gene id: 3702:AT4G12430
uniprot id: Q9SU39
names: Function
names: Induction
names: Similarity
messages: Belongs to the trehalose phosphatase family.
messages: By trehalose.
messages: Participates in the regulation of trehalose metabolism.
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).

3702:AT1G67750
gene id: 3702:AT1G67750
uniprot id: A0A5S9WTM1
uniprot id: Q9FXD8
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT5G38820
gene id: 3702:AT5G38820
uniprot id: F4KBM7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.6) subfamily.
messages: Membrane

3702:AT2G23430
gene id: 3702:AT2G23430
uniprot id: A0A178VXT6
uniprot id: Q67Y93
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CDI family. ICK/KRP subfamily.
messages: Binds and inhibits CYCD2-1/CDKA-1 kinase complex activity. Regulates cell division which is crucial for plant growth, development and morphogenesis. Functions in turning cells from a mitotic to an endoreplicating cell cycle mode. Acts cell- and non-cell-autonomously to regulate endoreduplication by allowing S phase progression, but blocking entry into mitosis. Keeps on the one hand the plant cell cycle locally controlled, and on the other hand provides a possibility of linking cell cycle control in single cells with the supracellular organization of a tissue or an organ. May target specifically CDKA-1.
messages: By abscisic acid (ABA).
messages: Expressed at low levels in roots, stems, leaves and flowers.
messages: Highly expressed in root pericycle and cell suspension culture during cell cycle arrest. Expressed early in the G1 phase, disappears quickly and starts to increase again to reach a peak before mitosis.
messages: No visible phenotype.
messages: Plants overexpressing ICK1/KRP1 show altered morphology (including flowers) with a reduction in plant size, cell numbers, pollen germination, seed production and CDK kinase activity. Trichome cells misexpressing ICK1/KRP1 show reduced endoreduplication and cell size, and undergo cell death. ICK1/KRP1 degradation is regulated by the AXR1-dependent RUB conjugation pathway that is required for the function of the SCF complexes.
messages: Specifically interacts with CDKA-1, but not with CDKB1-1. Interacts with CYCD2-1 and CYCD3-1.
messages: Ubiquitinated independently by RKP and SCF (SKP1-CUL1-FBL5/SKP2B) protein ligase complex, leading to proteasomal degradation.
messages: nucleoplasm

3702:AT5G18380
gene id: 3702:AT5G18380
uniprot id: A0A178UFG3
uniprot id: A8MRX2
uniprot id: F4JWM1
uniprot id: Q42340
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS9 family.
messages: Cytoplasm

3702:AT5G26160
gene id: 3702:AT5G26160
uniprot id: Q7Y219
names: Function
messages: Seems not necessary for chloroplast and nuclear photorelocation movements.

3702:AT5G48450
gene id: 3702:AT5G48450
uniprot id: A0A1P8BGY1
uniprot id: A0A654G9G3
uniprot id: F4K1P9
names: Similarity
messages: Belongs to the multicopper oxidase family.

3702:AT1G01120
gene id: 3702:AT1G01120
uniprot id: A0A178W124
uniprot id: Q9MAM3
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Contributes to cuticular wax and suberin biosynthesis. Involved in both decarbonylation and acyl-reduction wax synthesis pathways. Elongase condensing enzyme mostly active with saturated fatty acids, especially with 16:0, 16:1, 18:0, and 20:0. Mediates the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C22, C24 and C26).
messages: Endoplasmic reticulum membrane
messages: Inhibited by K3 herbicides such as alachlor, allidochlor, anilofos, cafenstrole, fentrazamide and flufenacet (PubMed:15277688). Strongly inhibited by metazachlor and mefluidide (PubMed:22284369).
messages: It is uncertain whether Met-1 or Met-9 is the initiator.
messages: Plants have thinner stems with an altered wax composition, and are more sensitive to dehydration.
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Down-regulated by darkness and low temperature, and up-regulated by salt, drought and osmotic stress (PubMed:18465198).
messages: Ubiquitous (PubMed:10074711). Expressed in siliques, flowers, leaves and stems. Barely detected in roots (PubMed:18465198).

3702:AT5G58600
gene id: 3702:AT5G58600
uniprot id: Q9LUZ6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Expressed in flowers, siliques, stems and leaves.
messages: Membrane
messages: Required for nonhost resistance (NHR) during plant-microbe interactions. Plants mutated in PMR5 are resistant to powdery mildew species (PubMed:15584961, PubMed:19810803). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).

3702:AT4G20230
gene id: 3702:AT4G20230
uniprot id: Q8L7G4
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: Involved in terpene biosynthesis in roots. Possesses diterpene (C20) synthase activity in vitro. Does not seem to be involved in sesquiterpene (C15) biosynthesis.
messages: Predominantly expressed in roots but also in stems, leaves and flowers.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT1G09080
gene id: 3702:AT1G09080
uniprot id: A0A178WHW4
uniprot id: Q8H1B3
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.
messages: Binding to ERDJ3A activates the ATPase activity of BIP3.
messages: Bip1, bip2 and bip3 triple mutation is pollen lethal (PubMed:24486762). Bip1, bip2 and bip3 triple mutation affects female gametophyte development during the early stages (PubMed:26186593).
messages: Endoplasmic reticulum lumen
messages: Expressed in mature pollen grains, and pollen tubes.
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable). Required for pollen development and pollen tube growth (PubMed:24486762). May be required for the early stages of female gametophyte development, but not for polar nuclei fusion during female gametophyte (PubMed:26251880). Possesses ATPase activity in vitro (PubMed:26186593).
messages: Induced by tunicamycin and DTT.
messages: Interacts with BZIP28 (via C-terminus) (PubMed:23624714). Interacts with ERDJ3A (PubMed:26186593).
messages: Nucleus

3702:AT1G34780
gene id: 3702:AT1G34780
uniprot id: A0A7G2E192
uniprot id: Q9SA00
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G04760
gene id: 3702:AT1G04760
uniprot id: Q9MAS5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the synaptobrevin family.
messages: Cell membrane
messages: Early endosome membrane
messages: Expressed in flowers, leaves, stems and roots.
messages: Involved in the targeting and/or fusion of transport vesicles to their target membrane.

3702:AT1G51480
gene id: 3702:AT1G51480
uniprot id: Q9C8K0
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT3G58560
gene id: 3702:AT3G58560
uniprot id: Q8W0Z9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.
messages: Belongs to the CCR4/nocturin family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus

3702:AT1G63880
gene id: 3702:AT1G63880
uniprot id: Q9CAK1
names: Disruption Phenotype
names: Domain
names: Function
messages: No visible phenotype under normal growth conditions, but mutant plants are susceptible to the pathogen Leptosphaeria maculans.
messages: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Leptosphaeria maculans (blackleg disease).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT5G03680
gene id: 3702:AT5G03680
uniprot id: Q9LZS0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Confined to flowers, at low levels. Also present in 7-days-old seedlings. Barely detectable in other tissues such as young seedlings, roots, stems, leaves and siliques (PubMed:15269176). Expressed in flower primordia, more precisely between newly arisen sepal primordia and also at the basal margins of developing sepals (PubMed:25697797).
messages: Disrupted perianth development, particularly petal initiation and orientation, sometimes leading to petal fusion.
messages: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway.
messages: First observed in the early-developing flower, in four zones between the initiating sepals and in their developing margins. Later detected in the margins of expanding sepals, petals and stamens, and in the leaf margins.
messages: Interacts with KIN10.
messages: Nucleus
messages: Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux.

3702:AT2G05220
gene id: 3702:AT2G05220
uniprot id: A0A178VP20
uniprot id: Q9SJ36
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS17 family.

3702:AT5G23450
gene id: 3702:AT5G23450
uniprot id: Q9LRB0
names: Function
names: Induction
names: Tissue Specificity
messages: Expressed in roots, stems, leaves and at higher levels in flowers.
messages: Involved in the production of sphingolipid metabolites. Active on sphingosine, phytosphingosine (PHS, 4-hydroxysphinganine), D-erythro-dihydrosphingosine, D-erythro-sphingosine and trans-4, trans-8-sphingadienine, an LCB found exclusively in plants, but not on N-acetyl-dihydrosphingosine (C2-dihydroceramide) and D-threo-dihydrosphingosine.
messages: Not induced by low-humidity stress or by abscisic acid treatment.

3702:AT5G53030
gene id: 3702:AT5G53030
uniprot id: A0A178UEK8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G14860
gene id: 3702:AT1G14860
uniprot id: Q9LQU5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, stems and inflorescences.
messages: Mitochondrion
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.

3702:AT3G25650
gene id: 3702:AT3G25650
uniprot id: Q1PEL7
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: Expressed at low levels in seedlings and leaves.
messages: Highly expressed in the pith and vascular bundle in the stem. Found in the pedicel of young buds. Also expressed in the inner epidermis of carpels and pedicels in mature flowers. In siliques, mostly expressed in inner epidermis of the valve.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.

3702:AT4G28650
gene id: 3702:AT4G28650
uniprot id: A0A178V5Y0
uniprot id: Q9M0G7
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylation induced by the interaction with LURE1.2.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in pollen tubes.
messages: Homodimer. Interacts with MDIS1 and LURE1.2.
messages: Involved in the regulation of procambium maintenance and polarity during vascular-tissue development (PubMed:17570668). Involved in the pollen tube perception of the female signal (PubMed:26863186). Phosphorylates MDSI1 (PubMed:26863186).
messages: Reduced procambial cells number, and adjacent or interspersed xylem and phloem formation.

3702:AT3G51700
gene id: 3702:AT3G51700
uniprot id: Q9SCT8
names: Similarity
messages: Belongs to the helicase family.

3702:AT5G09830
gene id: 3702:AT5G09830
uniprot id: A0A178UCW4
uniprot id: Q9FIC3
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BolA/IbaG family.
messages: Belongs to the bolA/yrbA family.
messages: Can be either glutathionylated or forming covalent homodimers, depending on the oxidation state.
messages: Cytoplasm
messages: Homodimer (PubMed:24203231). Interacts in vitro with GRXS14, GRXS15, GRXS16 and GRXS17, but not with GRXC5 (PubMed:24203231). Interacts in vivo only with GRXS17 (PubMed:24203231, PubMed:24714563).
messages: May act either alone or in interaction with glutaredoxin as a redox-regulated transcriptional regulator, or as a factor regulating Fe-S cluster biogenesis (Probable). The GRXS17-BOLA2 heterodimer binds a labile, oxygen sensitive iron-sulfur cluster (PubMed:24714563).
messages: Nucleus
messages: The putative nucleic acid binding region (34-77) coincides with the interaction surface with glutaredoxin.

3702:AT3G53180
gene id: 3702:AT3G53180
uniprot id: F4J9A0
names: Similarity
messages: Belongs to the glutamine synthetase family.

3702:AT4G39350
gene id: 3702:AT4G39350
uniprot id: A0A384LAI4
uniprot id: O48947
uniprot id: W8QPD2
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the primary cell wall formation.
messages: Cell membrane
messages: Expressed throughout the embryo during all steps of embryogenesis, and decrease toward the bent-cotyledon stage.
messages: Homodimer. Interaction through zinc finger domain.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Plants display reduced cellulose synthesis affecting microtubule orientation, general cell size, hypocotyl growth and seeds production. Partially redundant with CESA6.
messages: Strongly and ubiquitously expressed. Localized in some dividing and expanding cells, as well as in vascular tissues.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02230
gene id: 3702:AT3G02230
uniprot id: A0A178VK37
uniprot id: Q9SRT9
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RGP family.
messages: Golgi apparatus
messages: Heteromers with RGP2, RGP3, RGP4 and RGP5.
messages: No visible phenotype under normal growth condition, but significant reduction in total cell wall arabinose. Rgp1 and rgp2 double mutant is male gametophyte lethal, with an arrest in pollen mitosis (PubMed:17071651). RNAi-mediated knockdown of both RGP1 and RGP2 causes severe developmental defects and strong reduction in total cell wall arabinose (PubMed:21478444).
messages: Predominantly expressed in shoot and root apical meristems. Expressed in epidermal cells of leaves, inflorescence stems and seed coat. Expressed in pollen.
messages: Probable UDP-L-arabinose mutase involved in the biosynthesis of cell wall non-cellulosic polysaccharides.
messages: Reversibly glycosylated in vitro by UDP-glucose, UDP-xylose and UDP-galactose, but not UDP-mannose.
messages: The conserved DXD motif is involved in enzyme activity.
messages: UDP-L-arabinose mutase involved in the biosynthesis of cell wall non-cellulosic polysaccharides. Catalyzes the interconvertion of UDP-L-arabinopyranose (UDP-Arap) and UDP-L-arabinofuranose (UDP-Araf) in vitro. Preferentially catalyzes the formation of UDP-Arap from UDP-Araf. At thermodynamic equilibrium in vitro the ratio of the pyranose form over the furanose form is 95:5. Is not active on other UDP-sugars (UDP-Gal, UDP-Xyl, UDP-Glc, GDP-Man and GDP-Fuc) (PubMed:21478444). Functions redundantly with RGP2 and is essential for proper cell walls and pollen development. Probably involved in the formation of the pectocellulosic cell wall layer intine. Is probably active as heteromer in vivo (PubMed:17071651).
messages: cytosol

3702:AT2G02710
gene id: 3702:AT2G02710
uniprot id: O64511
names: Caution
names: Miscellaneous
names: PTM
names: Subunit
messages: Contains Gly-74 instead of the conserved Cys required for the covalent attachment of FMN in the first PAS domain.
messages: FMN binds covalently to cysteine after exposure to blue light and is reversed in the dark.
messages: Interacts with VTC2, VTC5 and BLH10.
messages: May be due to competing acceptor splice site.
messages: Was originally thought to contain a F-box domain.

3702:AT1G60989
gene id: 3702:AT1G60989
uniprot id: A0A5S9WNF8
uniprot id: P82626
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G12420
gene id: 3702:AT1G12420
uniprot id: A0A178WEK2
uniprot id: A0A1P8AQK2
uniprot id: Q9LNA5
names: Function
names: Induction
names: Tissue Specificity
messages: Binds amino acids.
messages: By abscisic acid (ABA), and cold and salt stresses.
messages: Expressed in roots, leaves, flowers and siliques.
messages: May bind amino acids.

3702:AT1G56385
gene id: 3702:AT1G56385
uniprot id: B3H6X7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G28610
gene id: 3702:AT2G28610
uniprot id: A0A384LML6
uniprot id: Q1PEZ2
uniprot id: Q9SIB4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the WUS homeobox family.
messages: Expressed in aerial parts of seedlings, inflorescences and flowers at low level. Expressed in a restricted number of L1 cells at the lateral regions of flower primordia.
messages: First expressed in the L1 cells of the lateral regions of a flower primordium at early stage 1, in which the lateral sepals are expected to develop at a later stage. It then rapidly decreases at the late stage 1 and disappears at stage 2. At stage 3, it reappears in all four-sepal young primordia. Not detected at the central zone of the inflorescence meristem and the floral meristem. In stages 4 through 6, when four sepals develop to enclose the flower bud, it is localized at the lateral edges of the four sepals and forms an arch of the L1 cells at the margin of sepals. Expressed in the young primordia of petals and stamens. As the petals and stamens develop, it is limited at the margins of petals and stamens in a way similar to that of sepals. In the vegetative phase, it is expressed at the lateral regions of young leaf primordia, as well as in flowers and floral organs.
messages: Nucleus
messages: Probable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in the lateral sepal axis-dependent development of flowers, probably by regulating the proliferation of L1 cells at the lateral region of flower primordia. Required for the formation of the margin cells of the first and second whorl organs.

3702:AT5G20550
gene id: 3702:AT5G20550
uniprot id: A0A5S9Y5V8
uniprot id: Q8LF12
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT1G09794
gene id: 3702:AT1G09794
uniprot id: A0A178WLR3
uniprot id: F4I2K8
names: Similarity
messages: Belongs to the CMC4 family.

3702:AT5G26250
gene id: 3702:AT5G26250
uniprot id: Q9SBA7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Mediates an active uptake of hexoses, probably by sugar/hydrogen symport.
messages: Membrane

3702:AT4G35830
gene id: 3702:AT4G35830
uniprot id: A0A178V2T4
uniprot id: B3H5Y0
uniprot id: Q42560
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the aconitase/IPM isomerase family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Contributes to oxidative stress tolerance (PubMed:17013749). May have a role in respiration (PubMed:25061985).
messages: Cytoplasm
messages: Mitochondrion
messages: Monomer.
messages: Mostly expressed in roots, stems and leaves, also present in stems and flowers.
messages: Reduced cytosolic and mitochondrial aconitase (ACO) activities by 70 and 20 precent, respectively (PubMed:17013749, PubMed:17437406). Increased tolerance to oxidative stress mediated by paraquat, a superoxide-generating agent (PubMed:17013749). Slightly higher production of CO(2) (PubMed:25061985).
messages: Slight level decrease after 3 days of iron starvation.

3702:AT2G03280
gene id: 3702:AT2G03280
uniprot id: A0A654ERH9
uniprot id: Q6E279
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Glycosyltransferase involved in the formation of rhamnogalacturonan I (RG-I) oligosaccharides in the seed coat mucilage, which is a specialized cell wall with abundant RG-I (By similarity). Transfers the rhamnose residue from UDP-beta-L-rhamnose to RG-I oligosaccharides (PubMed:30082766).
messages: Golgi apparatus membrane

3702:AT4G35970
gene id: 3702:AT4G35970
uniprot id: A0A178V4R4
uniprot id: A0A1P8B5P9
uniprot id: Q7XZP5
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds one cation per subunit; probably K(+), but might also be Ca(2+).
messages: Interacts with AKR2A and AKR2B.
messages: Peroxisome membrane
messages: Plays a key role in hydrogen peroxide removal.

3702:AT4G11730
gene id: 3702:AT4G11730
uniprot id: Q9T0E0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Membrane
messages: This protein is not an active H(+)-ATPase in its current form as there is a deletion in a conserved domain crucial for P-type ATPase function.

3702:AT1G41880
gene id: 3702:AT1G41880
uniprot id: A0A178WCY4
uniprot id: Q9FZH0
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL33 family.

3702:AT1G49220
gene id: 3702:AT1G49220
uniprot id: A0A178W5U7
uniprot id: P0C034
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G26220
gene id: 3702:AT5G26220
uniprot id: A0A1R7T3I6
uniprot id: A0A5S9Y7V9
uniprot id: Q8GY54
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the gamma-glutamylcyclotransferase family.
messages: Binds 2 Mn(2+) ions per subunit.
messages: By cadmium and lead (PubMed:15708574). Induced by arsenite (PubMed:24214398).
messages: Catalyzes the formation of 5-oxoproline from gamma-glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis.
messages: Catalyzes the formation of 5-oxoproline from gamma-glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis. Converts both GSH and gamma-glutamyl-L-alanine to 5-oxoproline in vitro. Plays a role in detoxification of heavy metals and metalloids by recycling glutamate and maintaining GSH homeostasis.
messages: Cytoplasm
messages: Expressed in the central vascular bundle of roots, leaf veins, hydathodes, cauline leaves, shoot apex, sepal veins, flower receptacles and developing seeds.
messages: No visible phenotype under normal growth conditions, but mutant plants show increased tolerance to arsenite and cadmium.

3702:AT1G21410
gene id: 3702:AT1G21410
uniprot id: Q9LPL4
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell-cycle regulated expression with higher levels during early S-phase and G2/M stages. Repressed by auxin through a ubiquitin-dependent pathway (at protein level). Only biologically active auxin promotes proteolysis of SKP2A.
messages: Component of SCF(SKP2A) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins (including cell cycle repressors). Acts as an auxin receptor; one active auxin is indole-3-acetate. Regulates the stability of the transcription factors E2FC and DPB, repressors of cell proliferation. Confers increase tolerance to osmotic stress by promoting cell division, especially in meristems. Promotes the formation of lateral root primordia.
messages: Expressed in embryo, seedlings, hypocotyl, roots, leaves and flowers.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex. Interacts with CUL1 (RUB1-modified and non-modified isoforms), SKP1A, SKP1B and ASK18. Recruit DPB and phosphorylated E2FC. Interacts with auxin. Auxin controls the interaction with DPB.
messages: Polyubiquitinated and subsequently targeted to proteasome. Auxin promotes this ubiquitination-mediated degradation.
messages: The F-box is necessary for the interaction with ASK proteins.
messages: Widely expressed during the first stages of germination. In seedling, more intense in dividing areas, such as meristems and young organs. In leaves, confined to vascular tissue and stomatal cells. In roots, detected in tips, vascular cylinder of the distal part, and in lateral roots emerging primordia. Low levels in specific cells of root meristems.

3702:AT1G68000
gene id: 3702:AT1G68000
uniprot id: A0A178WC27
uniprot id: Q8LBA6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Catalyzes the biosynthesis of phosphatidylinositol (PtdIns) as well as PtdIns:inositol exchange reaction. May thus act to reduce an excessive cellular PtdIns content. The exchange activity is due to the reverse reaction of PtdIns synthase and is dependent on CMP, which is tightly bound to the enzyme.
messages: Expressed in stems, flowers, shoots and roots. Present in epidermal tissues.
messages: Membrane

3702:AT2G10550
gene id: 3702:AT2G10550
uniprot id: Q9SI87
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
messages: Mitochondrion
messages: Probable inactive paralog of AtUNG (AC Q9LIH6) generated by a gene duplication event and subsequently disrupted by at least two transposon insertions.

3702:AT1G13560
gene id: 3702:AT1G13560
uniprot id: A0A178WA43
uniprot id: A0A1P8AWM4
uniprot id: F4HQU9
uniprot id: O82567
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Catalyzes both phosphatidylcholine and phosphatidylethanolamine biosynthesis from CDP-choline and CDP-ethanolamine, respectively. Has a higher cholinephosphotransferase activity than ethanolaminephosphotransferase activity.
messages: Membrane

3702:AT3G56450
gene id: 3702:AT3G56450
uniprot id: Q9LXZ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNAP family.
messages: Binds to the syntaxin SYP21 and to NSF.
messages: Membrane
messages: Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Binds to SNARE complex and then recruits NSF to disassemble it (By similarity).

3702:AT3G61175
gene id: 3702:AT3G61175
uniprot id: P82766
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G14510
gene id: 3702:AT3G14510
uniprot id: Q9LRR0
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.
messages: Could be the product of a pseudogene.
messages: Monomer.
messages: chloroplast

3702:AT3G03773
gene id: 3702:AT3G03773
uniprot id: A0A178VFM3
uniprot id: F4J2B8
uniprot id: Q6ID70
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a co-chaperone for HSP90 (PubMed:20349287). Controls root development through the modulation of auxin distribution in the root meristem (PubMed:26163704).
messages: Acts as a co-chaperone for HSP90.
messages: Belongs to the p23/wos2 family.
messages: Cytoplasm
messages: Inhibited by heat shock treatment.
messages: Interacts with HSP90 in an ATP-dependent manner.
messages: Nucleus
messages: Phosphorylated by casein kinase 2 in vitro.
messages: Short root length. Impaired cell division in the root meristem.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Widely expressed but preferentially in the root meristem.

3702:AT3G61120
gene id: 3702:AT3G61120
uniprot id: A0A5S9XND8
uniprot id: Q38837
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.

3702:AT3G12020
gene id: 3702:AT3G12020
uniprot id: A0A178VNW3
uniprot id: F4J8L2
uniprot id: F4J8L3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT4G13810
gene id: 3702:AT4G13810
uniprot id: A0A1P8B683
uniprot id: F4JTT5
uniprot id: Q9SVN2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.

3702:AT3G49960
gene id: 3702:AT3G49960
uniprot id: Q0WTI3
uniprot id: Q96510
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: Slightly expressed in roots.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated transiently by a cold treatment.
messages: Vacuole

3702:AT1G77260
gene id: 3702:AT1G77260
uniprot id: Q94KE1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane

3702:AT1G20920
gene id: 3702:AT1G20920
uniprot id: Q8H0U8
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily.
messages: Helicase required for pre-mRNA splicing, cold-responsive gene regulation and cold tolerance.
messages: Nucleus
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: Up-regulated by cold.

3702:AT4G02740
gene id: 3702:AT4G02740
uniprot id: Q0WRC9
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT3G05625
gene id: 3702:AT3G05625
uniprot id: A0A384L7B2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02180
gene id: 3702:AT3G02180
uniprot id: A0A178VFA1
uniprot id: B3H6W7
uniprot id: Q9S7P8
names: Function
names: Similarity
names: Tissue Specificity
messages: Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
messages: Belongs to the SPIRAL1 family.
messages: Ubiquitous. Preferentially expressed in above-ground organs.

3702:AT3G24880
gene id: 3702:AT3G24880
uniprot id: A0A1I9LL80
uniprot id: F4J7T3
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the EAF1 family.
messages: Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A.
messages: Component of the NuA4 histone acetyltransferase complex. Interacts with ARP4 and SWC4, and (via HSA domain) with TAF14 and TAF14B.
messages: Decreased expression of EAF1A leads to decreased levels of H4K5 acetylation in the promoter region of major flowering regulator genes, decreased FLC expression and early flowering.
messages: Expressed in leaves.
messages: Nucleus

3702:AT2G46495
gene id: 3702:AT2G46495
uniprot id: A0A178VPW8
uniprot id: A0A178VRD3
uniprot id: A0A384KKB6
uniprot id: P0CH01
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G57980
gene id: 3702:AT1G57980
uniprot id: Q9C654
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT4G37180
gene id: 3702:AT4G37180
uniprot id: A0A178V5G1
uniprot id: A0A178V7R0
uniprot id: A0A384LM69
uniprot id: F4JRB0
names: Caution
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, inflorescence apex, floral primordia, stamen primordia, carpel primordia and ovules.
messages: Increased number of sepals and petals in flowers. Loss of organ boundary and identity, producing fused sepals, petaloid stamens and branching stamens fused along the filament.
messages: Interacts with ULT1.
messages: Nucleus
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional repressor that functions with ULT1 in a pathway which regulates floral meristem homeostasis and organ number in the flower. Binds specifically to the DNA sequence motif 5'-GTAGATTCCT-3' of WUS promoter, and may be involved in direct regulation of WUS expression. Binds specifically to the DNA sequence motif 5'-AAGAATCTTT-3' found in the promoters of AG and the NAC domain genes CUC1, CUC2 and CUC3, and may be involved in direct regulation of these gene expressions.
messages: cytosol

3702:AT5G24320
gene id: 3702:AT5G24320
uniprot id: A0A178U7I0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G01880
gene id: 3702:AT5G01880
uniprot id: A0A654FXP2
uniprot id: Q0WP64
uniprot id: Q9LZV8
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G05250
gene id: 3702:AT1G05250
uniprot id: P0DI10
uniprot id: Q67Z07
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: Slightly expressed in roots.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated transiently by a cold treatment.

3702:AT2G21190
gene id: 3702:AT2G21190
uniprot id: Q9SKP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERD2 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G06830
gene id: 3702:AT1G06830
uniprot id: A0A178W5R9
uniprot id: Q9M9Y9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.

3702:AT1G78680
gene id: 3702:AT1G78680
uniprot id: F4IBT7
uniprot id: O65355
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase C26 family.
messages: Cleaves the polyglutamate sidechains of folate polyglutamates in the vacuole. Is important for polyglutamyl tail length determination before vacuolar exit. Plays a role on folate stability and intracellular folate content. Has endopeptidase activity against 4-amino-10-methylpteroyl penta-, tetra-, tri- and di-gamma-L-glutamate substrates and is responsible for the production of folic acid, also called pteroylglutamic acid (PteGlu) from teroylpolyglutamates.
messages: Expressed in roots, in leaves, stems and siliques.
messages: No visible phenotype under normal growth conditions.
messages: Vacuole
messages: cell wall
messages: extracellular space

3702:AT2G07741
gene id: 3702:AT2G07741
uniprot id: A0A384KI37
uniprot id: P93298
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07741) is not demonstrated. It is also probably not RNA edited and therefore differs in all the positions known to be edited.
messages: Belongs to the ATPase A chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Key component of the proton channel; it may play a direct role in the translocation of protons across the membrane (By similarity).
messages: Mitochondrion inner membrane
messages: The atp6 gene is located on the border of one of the mitochondrial DNA repeats resulting in two identical copies of the mature protein with different propeptide extensions.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G48140
gene id: 3702:AT1G48140
uniprot id: A0A178WDH1
uniprot id: F4HWT0
uniprot id: Q8LEQ4
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DPM3 family.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex composed of DPMS1, DPMS2 and DPMS3; in the complex interacts directly with DPMS1 and DPMS2.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: No visible phenotype under normal growth conditions.
messages: Regulates the biosynthesis of dolichol phosphate-mannose. Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization and stable expression of DPMS1.
messages: Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER.

3702:AT3G63280
gene id: 3702:AT3G63280
uniprot id: Q8RXT4
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
messages: May be involved in plant development processes.

3702:AT5G25040
gene id: 3702:AT5G25040
uniprot id: A0A1P8BCU0
uniprot id: A0A2H1ZE79
uniprot id: F4KIL8
uniprot id: F4KIL9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Folate-biopterin transporter (TC 2.A.71) family.
messages: Could mediate folate transport.
messages: Membrane

3702:AT5G64670
gene id: 3702:AT5G64670
uniprot id: A0A178UPM8
uniprot id: Q9FLF3
names: Similarity
messages: Belongs to the universal ribosomal protein uL15 family.

3702:AT1G64950
gene id: 3702:AT1G64950
uniprot id: A0A5S9WSE9
uniprot id: Q9XIQ1
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G13060
gene id: 3702:AT5G13060
uniprot id: B7U179
names: Developmental Stage
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Detected in developing leaves during proliferation stage (9-day-old plants) and expression rapidly declines in leaves of 13 till 21-day-old plants. Also expressed during stomatal cell differentiation.
messages: Forms a heterodimeric complex with TCP24 (PubMed:18818695). Interacts with the origin recognition complex (preRC) components ORC1A, ORC1B, CDT1A and CDT1B (PubMed:18818695). Interacts with DUF7/AIP1 (PubMed:26538092).
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). In association with TCP24, exerts a negative role in cell proliferation in leaves, possibly by inhibiting mitotic DNA replication.
messages: Nucleus
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Weakly expressed in the emerging lateral roots and mainly expressed in the shoot apex, young leaves and flower buds.

3702:AT3G14360
gene id: 3702:AT3G14360
uniprot id: A0A384L5U4
uniprot id: F4JFU8
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acid lipase that can hydrolyze a range of triacylglycerols without a clear preference for acyl-chains (PubMed:29178188). Can also cleave 1,2-diacylglycerol, 1,3-diacylglycerol and 1-monoacylglycerol, but not phosphatidylcholine, phosphatidylethanolamine, or sterol esters (PubMed:29178188). Required for pollen tube growth (PubMed:29178188). Triacylglycerol hydrolysis by OBL1 may provide acyl groups for the synthesis of membrane lipids in growing pollen tubes (Probable).
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Expressed in pollen grains, pollen tubes, developing embryos, developing seeds and germinating seeds.
messages: Lipid droplet
messages: Membrane
messages: Reduced pollen tube growth.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G55010
gene id: 3702:AT3G55010
uniprot id: Q05728
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AIR synthase family.
messages: chloroplast

3702:AT2G31865
gene id: 3702:AT2G31865
uniprot id: A0A1P8B1V5
uniprot id: A0A5S9X312
uniprot id: Q8VYA1
names: Caution
names: Function
names: Similarity
messages: Belongs to the poly(ADP-ribose) glycohydrolase family.
messages: Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase.
messages: Was previously assigned to At2g31870.

3702:AT1G68600
gene id: 3702:AT1G68600
uniprot id: Q93Z29
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Endoplasmic reticulum membrane
messages: Malate transporter.

3702:AT5G56160
gene id: 3702:AT5G56160
uniprot id: A0A178UD46
uniprot id: F4K6D3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G10450
gene id: 3702:AT4G10450
uniprot id: A0A178V0L6
uniprot id: A0A1P8B5B3
uniprot id: Q9SZX9
names: Similarity
messages: Belongs to the universal ribosomal protein uL6 family.

3702:AT2G24820
gene id: 3702:AT2G24820
uniprot id: Q9SK50
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Highly expressed in green tissues and very low levels in non-photosynthetic tissues such as roots and etiolated seedlings.
messages: Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.
messages: No visible phenotype.
messages: Part of the Tic complex. Interacts with TIC62 and TIC110 (By similarity).
messages: Up-regulated by light.
messages: chloroplast inner membrane

3702:AT2G20825
gene id: 3702:AT2G20825
uniprot id: Q8S8I2
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cytoplasm
messages: Expressed in influorescence, pollen and siliques, with a higher expression in influorescence.
messages: Nucleus
messages: Putative transcription factor that acts as a key negative regulator of cell accumulation in shoot and floral meristems. Negatively regulates the size of the WUSCHEL (WUS)-expressing organizing center in inflorescence meristems. May act by down-regulating expression of WUS. Can compensate for mutant ULT1 protein when overexpressed.
messages: Specifically expressed during the reproductive developmental stage. Expressed in embryonic shoot apical meristems, in inflorescence and floral meristems, and in developing stamens, carpels and ovules.

3702:AT2G39790
gene id: 3702:AT2G39790
uniprot id: A0A178VVX4
uniprot id: O22288
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MAM33 family.
messages: Mitochondrion matrix
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G33330
gene id: 3702:AT2G33330
uniprot id: O22784
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Interacts with Grapevine fanleaf virus (GFLV) 2B-MP.
messages: Belongs to the cysteine-rich repeat secretory protein family. Plasmodesmata-located proteins (PDLD) subfamily.
messages: Both pdlp2 and pdlp3, and pdlp1 and pdlp3 double mutants show altered protein diffusion (measured using GFP). In pdlp1, pdlp2 and pdlp3 triple mutant there is inhibition of GFLV 2BMP tubule formation. Virus cell-to-cell movement is negatively affected. There is a 22% reduction in mean surface area of infection foci by GFLV and an approximately 12-hour-delay in long distance movement in comparison to wild-type plants. There is also a systemic delay in Cauliflower mosaic virus (CaMV) spread.
messages: Cell membrane
messages: Expression in the epidermis of floral primordia changes through development from being weakly expressed in the youngest the floral organs, with possibly a stronger expression on the abaxial side (P1, P2 stage) to being relatively strongly expressed in both the adaxial and abaxial epidermis at later stages.
messages: Highly expressed in inflorescence pedacel and shoot apex. Expressed in the outermost L1 layer of the shoot apical meristem and in the epidermis of bulging floral primordia. Within the L1, expression was restricted to the peripheral zone (at protein level).
messages: Modulates cell-to-cell trafficking.
messages: PDLPs were initially named Cysteine-rich secretory proteins based on a classification work that failed to predict the transmembrane region at the C-terminus (PubMed:11402176). However, it was later shown that PDLPs are membrane proteins.
messages: plasmodesma

3702:AT1G18350
gene id: 3702:AT1G18350
uniprot id: A0A178W604
uniprot id: Q9LPQ3
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily.
messages: By Pseudomonas syringae pv. tomato (Pst) DC3000/avrRpt2 infection.
messages: Expressed in all tissues, with a relatively higher level in leaves and lower level in roots and flowers.
messages: Interacts with MPK15.
messages: May function as a negative regulator of polar auxin transport. Positively regulates plant basal and systemic acquired resistance (SAR). Activates MPK3 and MPK6 in vitro.
messages: Overexpression of MKK5 (mutant bud1) causes deficiency in polar auxin transport and leads to plant architectural abnormality (PubMed:16377756). The bud1 mutant accumulates elevated levels of SA, and exhibits constitutive PR gene expression and enhanced resistance to both bacterial and oomycete pathogens (PubMed:17908155).
messages: Phosphorylation at Ser-193 and Ser-199 by MAP kinase kinase kinases positively regulates kinase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G04600
gene id: 3702:AT1G04600
uniprot id: F4I5Q6
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily.
messages: Homodimer.
messages: IQ domain mediates interaction with calmodulin.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity).
messages: The tail domain is a globular cargo-binding domain.

3702:AT5G44020
gene id: 3702:AT5G44020
uniprot id: A0A178UIR5
uniprot id: Q9FNC4
names: Function
names: Similarity
messages: Belongs to the APS1/VSP family.
messages: May function as somatic storage protein during early seedling development.

3702:AT1G08060
gene id: 3702:AT1G08060
uniprot id: Q9M658
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer (PubMed:27113777, PubMed:22346760). Interacts with PHD1, PIAL1 and PIAL2 to form a high molecular mass complex which mediates transcriptional silencing at heterochromatin regions (PubMed:27113777). Binds to AIPP3/BDT1 (PubMed:27113777).
messages: Nucleus
messages: Reactivated transcription of heavily methylated silent loci, independently of chromatin demethylation. Releases TSI, 5S ribosomal RNA genes as well as 180-bp and 106B repeats of chromocenters silencing independently of chromatin properties. Partial derepression of 35S promoter homology-dependent TGS in transgenic plants. Abnormal aberrant mRNA transcriptional read-through. Increased expression of minor 5S rRNA species. No nuclear organization alteration. Lost ability to form a high molecular mass complex with PIAL1 and PIAL2 (PubMed:27113777). Released transcriptional silencing of target genes (e.g. pFWA-LUC) but unchanged DNA methylation levels (PubMed:27113777).
messages: Requires for the complete maintenance of the 35S promoter homology-dependent TGS induced by T-DNA construct insertion.
messages: Together with PIAL1 and PIAL2, regulates transcriptional gene silencing (TGS) independently of changes in DNA methylation (PubMed:27113777, PubMed:22346760). Required for the heritable maintenance of transcriptional gene silencing (TGS) in heterochromatin, and particularly in the intermediate bivalent heterochromatin, characterized by an unsual methylation pattern consisting in hypermethylated DNA and histone H3 'Lys-4' methylation (H3K4me) together with depletion of histone H3 'Lys-9' methylation (H3K9me), in a chromatin methylation-independent manner, in a non-CG methylation context. May play a role in the RNA polymerase IV/V (Pol-IV/V)-mediated RNA-directed DNA methylation (RdDM) leading to TGS (also called siRNA-mediated TGS pathway), probably by modulating small interfering RNA (siRNA) accumulation. Especially involved in the gene silencing of the transcriptionally silent information region (TSI), 5S ribosomal RNA genes (localized in the pericentromeric heterochromatin of chromosomes 3, 4, and 5) and of 180-bp satellite repeats and 106B long terminal repeat (LTR)-like repeats of the chromocenters. Prevents the aberrant mRNA transcriptional read-through.

3702:AT5G63800
gene id: 3702:AT5G63800
uniprot id: A0A178URV0
uniprot id: Q9FFN4
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Expressed at low levels in siliques.
messages: apoplast

3702:AT3G05590
gene id: 3702:AT3G05590
uniprot id: A0A178V8M9
uniprot id: A0A1I9LT16
uniprot id: P42791
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the eukaryotic ribosomal protein eL18 family.
messages: Cytoplasm
messages: Interacts with NIK1 (PubMed:19112492). Interacts directly with EXA1 (PubMed:28362261).
messages: Ubiquitous.

3702:AT3G17810
gene id: 3702:AT3G17810
uniprot id: Q9LVI9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the dihydropyrimidine dehydrogenase family.
messages: Expressed in roots, leaves, stems, siliques and flowers. Highly expressed ion dry seeds.
messages: Involved in pyrimidine base degradation. Catalyzes the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate and the reduction of thymine to 5,6-dihydrothymine (DHT). Involved in the recycling of nitrogen from nucleobases to general nitrogen metabolism.
messages: No visible phenotype, but impaired degradation of both thymine and uracil (PubMed:19413687, PubMed:21865177). Slower germination and 2 days delay in seedling development (PubMed:21865177).
messages: Up-regulated at days 4 and 5 after germination and during senescence.
messages: Up-regulated by nitrogen limitation.
messages: chloroplast

3702:AT2G44065
gene id: 3702:AT2G44065
uniprot id: A0A384KKH3
uniprot id: Q8VZU4
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

3702:AT4G38340
gene id: 3702:AT4G38340
uniprot id: Q9SVF1
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.
messages: Up-regulated by nitrate.

3702:AT3G16480
gene id: 3702:AT3G16480
uniprot id: A0A654F7S8
uniprot id: O04308
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M16 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Does not seem to have a protease activity as it lacks one of the conserved zinc-binding sites.
messages: Heterodimer of alpha and beta subunits, forming the mitochondrial processing protease (MPP) in which subunit alpha is involved in substrate recognition and binding and subunit beta is the catalytic subunit (By similarity). Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341, PubMed:18305213). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493). Interacts with TIM23-2 (PubMed:22730406).
messages: Mitochondrion inner membrane
messages: Mitochondrion matrix
messages: Substrate recognition and binding subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins.
messages: chloroplast stroma

3702:AT5G40770
gene id: 3702:AT5G40770
uniprot id: A0A178UKZ2
uniprot id: O04331
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the prohibitin family.
messages: Cell membrane
messages: Component of a prohibitin multimeric complex in mitochondrial membranes.
messages: Cytoplasm
messages: Extreme constitutive ethylene response in air associated with a partial loss of ethylene-inducible gene expression and an increased ethylene production. Mitochondrial swelling, decreased meristematic cell production, increased cell division time and reduced cell expansion rates, leading to severe growth retardation. Reduced sensitivity to salt stress and defective in H(2)O(2)-induced nitric oxide (NO) accumulation, light-induced NO in cotyledons, abscisic acid (ABA)-induced NO accumulation and stomatal closure, and in auxin-induced lateral root formation.
messages: Mitochondrion inner membrane
messages: Mostly expressed in proliferative tissues, including vasculature, shoot and root apical tissues. Expressed in roots, stems, leaves and flowers (at protein level).
messages: Nucleus
messages: Prohibitin probably acts as a holdase/unfoldase for the stabilization of newly synthesized mitochondrial proteins (By similarity). Necessary for mitochondrial and cell metabolism and biogenesis. Required to regulate the ethylene-mediated signaling; involved in growth maintenance in the presence of ethylene. Functions in nitric oxide (NO)-mediated responses and in hydrogen peroxide-induced NO accumulation.

3702:AT2G39590
gene id: 3702:AT2G39590
uniprot id: A0A5S9X5G1
uniprot id: O80646
names: Similarity
messages: Belongs to the universal ribosomal protein uS8 family.

3702:AT3G10160
gene id: 3702:AT3G10160
uniprot id: F4J2K2
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: A monovalent cation.
messages: Belongs to the folylpolyglutamate synthase family.
messages: Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis.
messages: Mitochondrion inner membrane
messages: Mitochondrion matrix
messages: Vegetative phenotype does not differ visually from wild-type. No obvious defects in root development. Polyglutamylated folates still detectable, but loss of activity leads to a significant reduction (45%) in total foliar folate abundance compared to wild-type. The reduced total folate content is a result of reduced levels of 5-formyl-THF, 10-formyl and 5,10-methenyl-THF, 5-methyl-THF and THF (42, 42, 53 and 48%, respectively) compared to wild-type. The plastid and mitochondrial folate levels are also reduced by approximately 50 and 55%, respectively compared to wild-type. Folate polyglutamylation levels are significantly reduced but not abolished within the respective compartments. Combined loss of FPGS2 and FPGS1 result in embryo lethality. This double mutant has abnormal seeds that are readily distinguishable as albinos which do not proceed beyond the globular stage of embryogenesis. The absence of a developing embryo lead to collapse of seed walls, leaving shrivelled seed reamnants. Combined loss of FPGS2 and FPGS3 results in seedling lethality. Seedlings fail to proceed beyond the expanded cotyledon stage, exhibit an albino phenotype and are unable to thrive beyond germination.

3702:AT5G09820
gene id: 3702:AT5G09820
uniprot id: A0A1P8B9Y9
uniprot id: Q5M755
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PAP/fibrillin family.
messages: Essential for plastoquinone-9 (PQ-9) biosynthesis (PubMed:26432861, PubMed:29741733). Interacts with the diphosphate synthases SPS1 and SPS2, and binds to the hydrophobic solanesyl moiety, which is generated by SPS1 and SPS2, in FBN5-SPS homodimeric complexes to stimulate the enzyme activity of SPS1 and SPS2 (PubMed:26432861).
messages: Expressed in developing roots, developing leaves, young stems and sepals.
messages: Interacts with SPS1 and SPS2.
messages: Seedling lethality (PubMed:26432861, PubMed:28751900). Severe reduced growth, strong reduction of levels of plastoquinone-9 (PQ-9), and loss of plastochromanol-8 (PC-8) in leaves when grown on MS medium supplemented with sucrose (PubMed:26432861, PubMed:28751900). Severe decrease of photosynthetic performance and higher levels of reactive oxygen species (ROS) under cold stress (PubMed:26432861, PubMed:29741733).
messages: chloroplast stroma

3702:AT3G25920
gene id: 3702:AT3G25920
uniprot id: A0A178VFT9
uniprot id: P25873
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT3G21860
gene id: 3702:AT3G21860
uniprot id: Q9LSX8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: Expressed in young seedlings, roots, leaves, floral stems, inflorescences, and siliques.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with CPR1/CPR30.

3702:AT5G61110
gene id: 3702:AT5G61110
uniprot id: Q9FNQ4
names: Disruption Phenotype
names: Function
names: Subunit
messages: Interacts directly with AIPP3/BDT1.
messages: No obvious developmental defects (PubMed:33433058). Plants missing all PHD finger-containing proteins (e.g. PHD1, PAIPP2/PHD2, AIPP2/PHD3, PHD4, PHD5 and PHD6) exhibit an increased expression of flowering genes leading to an early flowering phenotype under long-day conditions as well as growth retardation (PubMed:33433058).
messages: Together with AIPP3/BDT1, cooperates to form a BAH-PHD bivalent histone reader complex able to read histone H3 lysine 27 trimethylation (H3K27me3) histone marks in order to regulate transcription, especially to prevent early flowering; promotes AIPP3/BDT1 binding to H3K27me3.

3702:AT3G47000
gene id: 3702:AT3G47000
uniprot id: A0A1I9LR68
uniprot id: A0A1I9LR69
uniprot id: Q9SD73
names: Similarity
messages: Belongs to the glycosyl hydrolase 3 family.

3702:AT1G20570
gene id: 3702:AT1G20570
uniprot id: A0A1P8AUV6
uniprot id: A0A1P8AUZ0
uniprot id: A0A1P8AUZ6
uniprot id: F4HUK8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TUBGCP family.
messages: Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.
messages: microtubule organizing center

3702:AT1G18550
gene id: 3702:AT1G18550
uniprot id: A0A178W9U1
uniprot id: F4ICA0
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-8 subfamily.

3702:AT3G63170
gene id: 3702:AT3G63170
uniprot id: A0A178V7B2
uniprot id: Q9M1X2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the chalcone isomerase family.
messages: Expressed in developing cotyledons, young seedlings, roots, seeds, embryos, macrospores, preanthesis and tapetum. Restricted to developing and reproductive tissues.
messages: Fatty-acid-binding protein. Interacts preferentially with saturated fatty acid. May be involved in alpha-linolenic (C18:3) metabolism.
messages: No visible phenotype during vegetative growth, but shorter siliques containing a reduced number of viable seeds. Elevated total fatty-acid levels in leaves and seeds of plants grown at 15 and 22 degrees Celsius.
messages: chloroplast stroma

3702:AT5G20635
gene id: 3702:AT5G20635
uniprot id: A0A384LBJ1
uniprot id: Q6AWT8
names: Caution
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed in flowers and siliques.
messages: G proteins are composed of 3 units, alpha, beta and gamma.
messages: Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
messages: Leaves with a roundish shape as well as rounder and smaller flowers.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G35470
gene id: 3702:AT4G35470
uniprot id: Q9SVW8
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the SHOC2 family.
messages: Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.
messages: Widely expressed.

3702:AT1G01750
gene id: 3702:AT1G01750
uniprot id: A0A178WJX4
uniprot id: A0A1P8AMT9
uniprot id: Q9LQ81
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.
messages: Belongs to the actin-binding proteins ADF family.
messages: cytoskeleton

3702:AT2G36910
gene id: 3702:AT2G36910
uniprot id: Q9ZR72
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxin efflux transporter that acts as a negative regulator of light signaling to promote hypocotyl elongation. Mediates the accumulation of chlorophyll and anthocyanin, as well as the expression of genes in response to light. Participates directly in auxin efflux and thus regulates the polar (presumably basipetal) auxin transport (from root tips to root elongating zone). Transports also some auxin metabolites such as oxindoleacetic acid and indoleacetaldehyde. Involved in diverse auxin-mediated responses including gravitropism, phototropism and lateral root formation. Confers resistance to herbicides such as dicamba, pendimethalin, oryzalin, and monosodium acid methanearsonate (MSMA), but not to herbicides such as glyphosate, atrazine, bentazon and fluazifop-p-butyl. Mediates also resistance to xenobiotics such as cycloheximide and the cytokinin N6-(2-isopentenyl)adenine (2IP).
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: By auxin.
messages: Cell membrane
messages: Interacts with 1-naphthylphthalamic acid (NPA) and FKBP42/TWD1.
messages: Transport activity inhibited by 1-N-naphthylphthalamic acid (NPA), cyclopropyl propane dione (CPD), cyclosporin A, verapamil and quercetin.
messages: Ubiquitous, with high levels in peduncles. Mostly localized in young developing tissues, including meristems, as well as root and shoot apices.

3702:AT4G27900
gene id: 3702:AT4G27900
uniprot id: A0A178UZH8
uniprot id: Q9SUE8
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G21850
gene id: 3702:AT1G21850
uniprot id: A0A178W9U5
uniprot id: Q9SFF2
names: Similarity
messages: Belongs to the multicopper oxidase family.

3702:AT1G52190
gene id: 3702:AT1G52190
uniprot id: A0A5S9WP68
uniprot id: Q9M817
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Expressed in shoots, stems, leaves, flowers and siliques. Mainly detected in larger expanded leaves, in the companion cells of major veins.
messages: Low-affinity nitrate transporter involved in xylem-to-phloem transfer for redistributing nitrate into developing leaves. Not involved in dipeptides transport.
messages: Nrt1.11 and nrt1.12 double mutant is defective in high-nitrate-enhanced growth.

3702:AT3G10420
gene id: 3702:AT3G10420
uniprot id: F4J3R7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Albino seedlings with defects in etioplast and amyloplast development leading to degenerate organelle-like structures, but normal green vegetative tissues (PubMed:21045120). Reduced hypocotyl gravitropism probably due to the lack of amyloplasts (PubMed:21045120).
messages: Belongs to the ycf45 family.
messages: Required during eoplast (a highly reduced plastid type present during the degreening and dehydration stages of seed maturation) development in embryos and early stages of eoplast redifferentiation during seedling growth.
messages: chloroplast envelope
messages: chloroplast membrane

3702:AT2G26100
gene id: 3702:AT2G26100
uniprot id: A0A1P8B0L1
uniprot id: A0A384KC83
uniprot id: Q66GS2
uniprot id: W8PV11
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G38880
gene id: 3702:AT2G38880
uniprot id: A0A384KRF5
uniprot id: A0A654F1G8
uniprot id: A0A7G2ECN1
uniprot id: A6XB86
uniprot id: B6EUB6
uniprot id: F4ITZ0
uniprot id: F4ITZ4
uniprot id: F4ITZ6
uniprot id: Q3EBK1
uniprot id: Q9SLG0
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex (By similarity). The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity).
messages: Enhanced by dehydration stress but repressed by heat stress.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC (By similarity). NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity). Binds directly with DPB3-1 (PubMed:25490919).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous. Predominantly expressed in leaves, flowers and siliques.

3702:AT5G13440
gene id: 3702:AT5G13440
uniprot id: A0A178U9B8
uniprot id: Q9LYR2
names: Caution
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Rieske iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster per subunit (By similarity). Binds to divalent metal cations (PubMed:12606038).
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:11870776, PubMed:18189341, PubMed:18305213). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c. The Rieske protein is a catalytic core subunit containing a [2Fe-2S] iron-sulfur cluster. It cycles between 2 conformational states during catalysis to transfer electrons from the quinol bound in the Q(0) site in cytochrome b to cytochrome c1.
messages: Membrane
messages: Mitochondrion inner membrane
messages: The Rieske protein is a high potential 2Fe-2S protein.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G11670
gene id: 3702:AT1G11670
uniprot id: A0A178WD87
uniprot id: Q9SAB0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT5G39730
gene id: 3702:AT5G39730
uniprot id: A0A654G6I0
uniprot id: Q9FIX1
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the gamma-glutamylcyclotransferase family.
messages: Cell membrane
messages: Constitutive expression with an increase during flowering.
messages: Expressed constitutively.
messages: Expressed in flowerss, leaves, stems, seeds and roots.
messages: Putative gamma-glutamylcyclotransferase.

3702:AT4G35040
gene id: 3702:AT4G35040
uniprot id: Q8VY76
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Induced by zinc deficiency.
messages: No visible phenotype under normal growth conditions (PubMed:20479230, PubMed:26306426). Mutant seedlings grown under normal conditions accumulate reduced levels of zinc in roots. Mutant seedlings grown in zinc-depleted medium have reduced root length (PubMed:26306426).
messages: Nucleus
messages: Transcription factor involved in the response to zinc ion deficiency. Binds to the consensus sequence 5'-[AG]TGTCGACA[CT]-3' also called zinc deficiency response element (ZDRE). The ZDRE sequence is conserved in the plant kingdom and present in the promoters of genes that constitute the primary response to zinc deficiency, comprising additional ZIP metal transporter genes (PubMed:20479230, PubMed:26306426). Required for zinc accumulation in roots. Mediates the expression of the zinc transporters ZIP3, ZIP4, ZIP5 and ZIP9 during growth in zinc-deficient conditions. ZIP9 transporter is involved in zinc uptake in roots (PubMed:26306426).

3702:AT2G29760
gene id: 3702:AT2G29760
uniprot id: A0A5S9X2I9
uniprot id: O82380
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Involved in RNA editing event in chloroplasts. Required for the editing of a single site in rps12 transcript.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT2G33835
gene id: 3702:AT2G33835
uniprot id: Q84VG7
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the transcription activator complex FRI-C composed of FRI, FRL1, SUF4, FLX and FES1. Interacts with FLX, (via C-terminus) with FRI (via C-terminus), and with RIN1, a component of the SWR1 chromatin-remodeling complex.
messages: Expressed in root and shoot apices and vasculature.
messages: Nucleus
messages: The zinc-finger motif is essential for transcription activation.
messages: Transcriptional activator involved in the FRIGIDA-mediated vernalization pathway, but not in the autonomous flowering pathway. Acts cooperatively with FRI (FRIGIDA) or FRL1 (FRIGIDA-LIKE 1) to promote FLC (FLOWERING LOCUS C) expression. Required for the stabilization of the FRI-C complex.

3702:AT1G23480
gene id: 3702:AT1G23480
uniprot id: Q9LQC9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like A subfamily.
messages: Golgi apparatus membrane
messages: Probable mannan synthase which consists of a 4-beta-mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall.

3702:AT3G56900
gene id: 3702:AT3G56900
uniprot id: Q8GWR1
names: Subcellular Location Annotation
names: Subunit
messages: Nucleus envelope
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins.
messages: nuclear pore complex

3702:AT2G44290
gene id: 3702:AT2G44290
uniprot id: A0A5S9X6Y6
uniprot id: O64864
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: By abscisic acid (ABA).
messages: Cell membrane
messages: Expressed preferentially in expanding leaves and sepals, restricted to the distal side (PubMed:21558309). Expressed at low levels in roots and stems (PubMed:21558309).
messages: Membrane
messages: Probable lipid transfer protein.
messages: Up-regulated in leaves during natural senescence.

3702:AT4G03410
gene id: 3702:AT4G03410
uniprot id: F4JI90
uniprot id: Q5XEV3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3702:AT1G35850
gene id: 3702:AT1G35850
uniprot id: Q9C8B8
names: Caution
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Could be the product of a pseudogene.
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT2G22610
gene id: 3702:AT2G22610
uniprot id: A0A1P8B002
uniprot id: F4IJK6
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.

3702:AT5G24530
gene id: 3702:AT5G24530
uniprot id: A0A5S9Y747
uniprot id: Q9FLV0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: (Microbial infection) Required for susceptibility to Pseudomonas syringae pv. tomato DC3000.
messages: (Microbial infection) Required for susceptibility to the downy mildew pathogen Hyaloperonospora arabidopsidis.
messages: (Microbial infection) Required for susceptibility to the oomycete Phytophthora capsici.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Converts salicylic acid (SA) to 2,3-dihydroxybenzoic acid (2,3-DHBA) (By similarity). Suppressor of immunity. Regulates negatively defense associated genes expression (e.g. PR-1, PR-2, and PR-5) (PubMed:18248595, PubMed:25376907). Negative regulator of defense against Hyaloperonospora arabidopsidis (PubMed:25376907).
messages: In the double mutant eds1-2 dmr6-1 and in dmr6-2, reduced susceptibility to the downy mildew pathogen Hyaloperonospora arabidopsidis (PubMed:15986928, PubMed:18248595, PubMed:25376907). Reduced hyphal growth due to immature haustoria, often with aberrant shapes (PubMed:15986928, PubMed:18248595). Reduced susceptibility to Pseudomonas syringae pv. tomato DC3000 and the oomycete Phytophthora capsici, associated with enhanced defense gene expression and elevated salicylic acid levels (PubMed:25376907). Normal susceptibility to P. syringae pv. tomato and Golovinomyces orontii (PubMed:15986928). Enhanced expression of a subset of defense-associated genes (PubMed:18248595).
messages: Locally induced during infections with both compatible and incompatible Hyaloperonospora arabidopsidis isolates, specifically in cells containing haustoria or directly surrounding the intercellular hyphae (PubMed:18248595, PubMed:25376907). Induced by the salicylic acid analog BTH. Accumulates in constitutive defense mutants (e.g. sid2 and npr1 mutants) (PubMed:18248595). Accumulates upon infection with the downy mildew Hyaloperonospora arabidopsidis, the powdery mildew Erysiphe orontii, and the bacterium Pseudomonas syringae as well as salicylic acid (SA) treatment (PubMed:25376907).

3702:AT5G10930
gene id: 3702:AT5G10930
uniprot id: A0A654G031
uniprot id: Q9LEU7
names: Domain
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT5G53600
gene id: 3702:AT5G53600
uniprot id: A0A178UL68
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G22220
gene id: 3702:AT1G22220
uniprot id: Q9LM18
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Not induced by auxin.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT3G27331
gene id: 3702:AT3G27331
uniprot id: B3H5H4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G23580
gene id: 3702:AT2G23580
uniprot id: A0A5S9X0X2
uniprot id: F4IMK6
uniprot id: O80474
names: Activity Regulation
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Esterase activity is down-regulated by salicylic acid (SA).
messages: Methylesterase shown to have carboxylesterase activity and methyl salicylate (MeSA) esterase activity in vitro.
messages: Methylesterase.

3702:AT1G31670
gene id: 3702:AT1G31670
uniprot id: P0DN99
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the C-terminally encoded plant signaling peptide (CEP) family.
messages: Extracellular signaling peptide that may regulate primary root growth rate and systemic nitrogen (N)-demand signaling.
messages: Induced by jasmonic acid (JA).
messages: Interacts with CEP receptors (e.g. CEPR1 and CEPR2).
messages: The mature small signaling peptide is generated by proteolytic processing of the longer precursor.
messages: apoplast

3702:AT3G57890
gene id: 3702:AT3G57890
uniprot id: F4J4K6
uniprot id: Q940S9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TBCC family.
messages: centrosome
messages: spindle pole

3702:AT4G29280
gene id: 3702:AT4G29280
uniprot id: A0A178V0L8
uniprot id: Q9M0F3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G60460
gene id: 3702:AT1G60460
uniprot id: Q5Q0E6
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TOP6B-like family.
messages: Chromosome
messages: Component of a topoisomerase 6 complex specifically required for meiotic recombination (PubMed:26917763, PubMed:28855712). Together with SPO11 (SPO11-1 and SPO11-2), mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination (PubMed:26917763, PubMed:28855712). The complex promotes relaxation of negative and positive supercoiled DNA and DNA decatenation through cleavage and ligation cycles (PubMed:26917763).
messages: Cytoplasm
messages: Defective in meiosis (PubMed:28855712). Sterility due to male and female gamete developmental defects leading to disturbed embryo sac development and abnormal pollen formation (PubMed:26917763, PubMed:28855712). Strong reduction in bivalent formation at metaphase I caused by defects in meiotic double-strand breaks (DSB) formation (PubMed:26917763, PubMed:28855712). Impaired homologous chromosome synapsis and recombination (PubMed:28855712).
messages: Despite a weak sequence similarity, retains most of the structural features of the ancestral archaeal Top6B subunit (AC O05207), including the transducer domain that interacts with the SPO11 subunit and the ATP-binding fold, also named GHKL fold.
messages: Expressed ubiquitously in different tissues, including roots, stems, leaves, seedlings, inflorescences, siliques and pollen grains, specially as a higher level in inflorescence.
messages: Heterotetramer of 2 SPO11 (SPO11-1 and/or SPO11-2) and 2 MTOPVIB chains (Probable). Interacts with SPO11-1 and SPO11-2 (PubMed:26917763, PubMed:28855712). Binds to PRD1 (PubMed:28855712).
messages: Nucleus

3702:AT1G67650
gene id: 3702:AT1G67650
uniprot id: Q9FXD1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SRP72 family.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER).
messages: Cytoplasm

3702:AT1G11720
gene id: 3702:AT1G11720
uniprot id: A0A178W4M9
uniprot id: F4IAG1
uniprot id: F4IAG2
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Expressed in leaves and flowers.
messages: Involved in the synthesis of glycan chains within amylopectin in leaves. May play a regulatory role in the control of starch accumulation in plastids.
messages: No visible phenotype under normal growth conditions, but mutant plants accumulate increased levels of starch and have starch granules with alterated morphology.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: amyloplast
messages: chloroplast

3702:AT4G13640
gene id: 3702:AT4G13640
uniprot id: A0A178UXZ1
uniprot id: Q8LAJ7
names: Disruption Phenotype
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MYB-CC family.
messages: Embryo lethal.
messages: Homo- and heterodimers (PubMed:26586833). Interacts with PHL2, but not with PHR1 (PubMed:26586833).
messages: Intron retention.
messages: Nucleus
messages: Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699).
messages: Up-regulated in roots by low Pi.

3702:AT5G19660
gene id: 3702:AT5G19660
uniprot id: A0A178UNR0
uniprot id: A0A1P8BD04
uniprot id: Q0WUG6
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase S8 family.
messages: Expressed in the vasculature of roots, cotyledons and leaves.
messages: Golgi apparatus membrane
messages: Interacts with PME1 and PME5.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Serine protease that catalyzes the first step (site-1 cleavage) in the proteolytic activation of various factors, prior to site-2 cleavage. Part of a regulated intramembrane proteolysis (RIP) cascade. Cleaves BZIP17 and BZIP28 after the Arg-Arg-Ile-Leu (RRIL) motif. May cleave BZIP49 after the RRIL motif. Targets the membrane-associated BZIP17 factor, which functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Cleaves the pectinesterases PME1 after the Arg-Arg-Leu-Met (RRLM) and Arg-Arg-Leu-Leu (RRLL) motifs, and PME5 after the Arg-Arg-Leu-Leu (RRLL) and Arg-Lys-Leu-Met (RKLM) motifs. This processing and C-terminus release occurs in the Golgi apparatus and is required for cell wall targeting of pectinesterases. Thus, SBT6.1 mediates the regulated release of mature pectinesterases from the Golgi (PubMed:19144003). Cleaves the peptide growth factor RALF23 after the Arg-Arg-Ile-Leu (RRIL) motif. This processing is required for RALF23 function in the negative regulation of brassinolide (BL)-mediated signaling pathway (e.g. BL-induced hypocotyl elongation and branching limitation) (PubMed:19473327).
messages: Short root (PubMed:20876872). Mutant plants have increased sensitivity to salt-induced osmotic stress (PubMed:17662035).

3702:AT1G56553
gene id: 3702:AT1G56553
uniprot id: Q2V4G5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G49360
gene id: 3702:AT5G49360
uniprot id: Q9FGY1
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 3 family.
messages: By sugar starvation.
messages: Delayed seeds germination resulting from an altered mucilage composition. No visible growth defects; probably due to partial redundancy with BXL2. Bxl1 and bxl2 double mutants have shortened siliques and curled leaf edges.
messages: Expressed in leaves, stems, seedlings, roots, inflorescences, siliques and developing seeds. Expressed in the vasculature of the roots, leaves, flowers and silique. Expressed in tissues undergoing secondary cell wall thickening such as protoxylem, metaxylem, intrafascicular cambium and fibers.
messages: Involved in pectic arabinan modification in mucilage secretory cells. Acts also as a beta-D-xylosidase during the remodeling of xylans in vascular development.
messages: Might be processed at the C-terminus.
messages: extracellular matrix

3702:AT3G09900
gene id: 3702:AT3G09900
uniprot id: Q9SF91
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Interacts with PI5K2.
messages: Involved in membrane trafficking from the Golgi to the plasma membrane.

3702:AT3G55040
gene id: 3702:AT3G55040
uniprot id: Q9M2W2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Lambda family.
messages: Catalyzes the glutathione-dependent reduction of S-glutathionylquercetin to quercetin. In vitro, possesses glutathione-dependent thiol transferase activity toward 2-hydroxyethyl disulfide (HED).
messages: chloroplast

3702:AT4G11830
gene id: 3702:AT4G11830
uniprot id: A0A1P8B5I3
uniprot id: A0A1P8B5J2
uniprot id: Q9T051
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by wounding, heavy metal, methyl salicylate, osmotic and salt stresses (PubMed:11090221, PubMed:17098468). Up-regulated by aluminum stress (PubMed:22163277).
messages: Belongs to the phospholipase D family. C2-PLD subfamily.
messages: C2 domain is a calcium-binding fold, and the binding promotes the protein association with membranes. In PLD gamma, all the calcium-coordinating acidic amino acids are conserved.
messages: Ca(2+). Requires micromolar level (PIP2-dependent).
messages: Cytoplasm
messages: Highly expressed in roots and flowers, moderately in stems, leaves and seedlings and low in siliques. Not detected in seeds.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Plays an important role in various cellular processes, including phytohormone action, vesicular trafficking, secretion, cytoskeletal arrangement, meiosis, tumor promotion, pathogenesis, membrane deterioration and senescence. Can use phosphatidylserine but prefers ethanolamine-containing lipids as substrates. Can use phosphatidylcholine (PC) as substrates in the presence of phosphatidylethanolamine (PE) and PIP2 (PubMed:17098468). Involved in membrane lipid modulation under aluminum (Al) stress and negatively modulate plant tolerance to Al (PubMed:22163277).
messages: Inhibited by neomycin.
messages: Membrane
messages: No effect on tolerance to aluminum.

3702:AT1G24320
gene id: 3702:AT1G24320
uniprot id: A0A1P8ARK2
uniprot id: Q84M89
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 63 family.
messages: Cleaves the distal alpha 1,2-linked glucose residue from the Glc(3)Man(9)GlcNAc(2) oligosaccharide precursor.
messages: Endoplasmic reticulum membrane

3702:AT5G27380
gene id: 3702:AT5G27380
uniprot id: P46416
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic GSH synthase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.
messages: chloroplast

3702:AT1G65620
gene id: 3702:AT1G65620
uniprot id: A0A178WIA0
uniprot id: O04479
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in young shoots, roots, stems, leaves, flowers and adaxial domains of cotyledonary and leaves primordia.
messages: Gain-of-function mutants iso1-D and iso-2D (T-DNA tagging) show completely curled up hyponastic rosette leaves.
messages: Homo- and heterodimer with AS1 (PubMed:23271976). Interacts with AS1 (PubMed:12874130, PubMed:23271976). Part of the AS1 repressor complex composed of AS1, LBD6/AS2 and HDA6 (PubMed:23271976, PubMed:12874130). Interacts with LFR (PubMed:29775508).
messages: Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation. Positively regulates LATERAL ORGAN BOUNDARIES (LOB) within the shoot apex, and the class III HD-ZIP genes REV, PHB, and PHV. Interacts directly with ASYMMETRIC LEAVES 1 (AS1) to repress the knox homeobox genes KNAT1, KNAT2, and KNAT6 and the abaxial determinants ARF3, KAN2 and YAB5. May act in parallel with the RDR6-SGS3-AGO7 pathway, an endogenous RNA silencing pathway, to regulate the leaf morphogenesis (PubMed:11311158, PubMed:12787254, PubMed:12874130, PubMed:14508003, PubMed:16006579, PubMed:16699177, PubMed:17395603, PubMed:17559509). Required for the binding of AS1 to the KNOX genes (PubMed:23271976). Involved in leaf polarity establishment by functioning cooperatively with RH10 or RID2 to repress abaxial genes ARF3, ARF4, KAN1, KAN2, YAB1 and YAB5, and the knox homeobox genes KNAT1, KNAT2, KNAT6, and STM to promote adaxial development in leaf primordia at shoot apical meristems at high temperatures (PubMed:27334696).
messages: Negatively regulated by SHOOT MERISTEMLESS (STM).
messages: Nucleus
messages: Plants are indistinguishable from that of wild-type at 16 degrees Celsius, however they generate a weak phenotype of pointed leaves at 22 degrees Celsius which become narrower at 26 degrees Celsius. In the leaves of plants grown at 26 degrees Celsius, the xylems are located on the adaxial sides and the phloems are on the abaxial sides, similar to those in the wild-type. Plants with double mutations in this protein and in RH10 or AS1 protein have abaxialized filamentous and trumpet-like leaves with loss of the adaxial domain at high temperatures. In double mutants, shapes of epidermal cells of the filamentous leaves are simple and rectangular, similar to those of a petiole, but different from those of flat leaves of wild-type plants. The filamentous leaves of the double mutant at 26 degrees Celsius show primitive or no vascular tissue without apparent xylem cells inside the bundle sheath, suggesting defects in differentiation of xylem cells on the adaxial side.

3702:AT2G28220
gene id: 3702:AT2G28220
uniprot id: A0A654F1Z1
uniprot id: F4IHR5
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT4G14510
gene id: 3702:AT4G14510
uniprot id: F4JVH1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds specific group II introns in chloroplasts and facilitates their splicing (PubMed:18799595, PubMed:32143506). Exhibits non-specific action during plastid rRNA biogenesis; RFC3 prevents unaccurate splicing to improve the accuracy of plastid rRNA processing (PubMed:32143506). Acts on subgroup IIB introns (PubMed:18799595). The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3B and CAF1 or CAF2 (PubMed:18799595). Required for seed development (PubMed:18799595).
messages: Expressed at low levels in roots and shoots.
messages: Interacts with RNA (By similarity). Part of large ribonucleo-protein particles that contain CAF1 and/or CAF2, and RNC1 (By similarity). Interacts with RFC3 in plastids (PubMed:32143506).
messages: No visible phenotype under normal growth conditions, but the seeds of the double mutant plants cfm3a-4 and cfm3b-2 fail to germinate (PubMed:18799595). The double mutant rfc3-2 sprt2-1 is rescued for primary and lateral root development, intracellular distributions of plastids in roots, as well as for plastid rRNA level compared to the single mutant rfc3-2 (PubMed:32143506).
messages: Plastid
messages: chloroplast

3702:AT1G11700
gene id: 3702:AT1G11700
uniprot id: A0A178W9R3
uniprot id: Q9SAA7
names: Developmental Stage
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Accumulates during senescence.
messages: Belongs to the senescence regulator S40 family.
messages: Cytoplasm
messages: Slightly induced by dark, abscisic acid (ABA) and salicylic acid (SA).

3702:AT4G24490
gene id: 3702:AT4G24490
uniprot id: Q8VYB7
names: Activity Regulation
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein prenyltransferase subunit alpha family.
messages: Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2 (PubMed:26589801). In vitro, can prenylate PGGTI targets with the C-terminal Cys-aliphatic-aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the alpha subunit is associated with a beta subunit (RGTB1 or RGTB2) (PubMed:26589801).
messages: Heterotrimer composed of the alpha subunit RGTA, the beta subunit RGTB and REP; within this trimer, RGTA and RGTB form the catalytic component, while REP mediates peptide substrate binding.
messages: The enzymatic reaction requires the aid of the Rab escort protein REP.

3702:AT3G01120
gene id: 3702:AT3G01120
uniprot id: A0A178VB36
uniprot id: P55217
names: Activity Regulation
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: A DNA region of the first exon coding for a conserved motif of 11 amino acids in CGS1 (positions 77-87) is required for post-transcriptional autoregulation and acts in cis to down-regulate its own mRNA stability in response to excess methionine. This conserved motif is dispensable for CGS enzymatic activity and only found in plant CGSs (PubMed:10558994, PubMed:12121993). It is unclear whether the transit peptide cleavage site is between Phe-68 and Val-69 (PubMed:9531508) or Ala-90 and Ala-91 (PubMed:25146485).
messages: Belongs to the trans-sulfuration enzymes family.
messages: Binds 1 pyridoxal 5'-phosphate per subunit.
messages: Catalyzes the first committed step of methionine (Met) biosynthesis. Catalyzes the formation of L-cystathionine from homoserine esters and L-cysteine, via a gamma-replacement reaction. Substrate preference for cystathionine synthesis is O-phospho-L-homoserine (OPH) > O(4)-succinyl-L-homoserine (OSH) >> O-acetyl-L-homoserine (OAH). Is able, at extremely low rate, to catalyze a gamma-elimination of OPH in the absence of cysteine to produce inorganic phosphate (Pi), 2-oxobutanoate and ammonia.
messages: Down-regulated by methionine.
messages: Inhibited by propargylglycine.
messages: chloroplast

3702:AT4G35790
gene id: 3702:AT4G35790
uniprot id: A0A178UUU1
uniprot id: A0A5S9XYZ0
uniprot id: F4JNU6
uniprot id: Q9C5Y0
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by free oleic acid in a dose-dependent manner and less effectively by other unsaturated fatty acids such as linoleic and linolenic acids (PubMed:11706190). Not activated by the saturated fatty acids stearic and palmitic acids (PubMed:11706190). PIP2 and Ca(2+) stimulate activity by promoting lipid substrate binding to the active site (PubMed:12397060). Activated by H(2)O(2) and by binding to GAPC (PubMed:14508007, PubMed:22589465).
messages: Belongs to the phospholipase D family. C2-PLD subfamily.
messages: By salt stress or dehydration, in vascular tissues of roots, cotyledons and leaves (PubMed:11489173, PubMed:19017627). Not induced cold stress (PubMed:11489173). Up-regulated by abscisic acid in rosette leaves (PubMed:22932846, PubMed:22392280).
messages: C2 domain is a calcium-binding fold, and the binding promotes the protein association with membranes. In PLD delta, all the calcium-coordinating acidic amino acids are conserved.
messages: Ca(2+). Requires millimolar level (PIP2-dependent).
messages: Cell membrane
messages: Expressed in roots, leaves, stems, siliques and flowers (PubMed:11706190, PubMed:11489173). Strongly expressed in the vascular tissues of cotyledons and leaves under dehydration stress conditions (PubMed:11489173). Expression is higher in old leaves than in young leaves (PubMed:11706190). Expressed in leaves and guard cells (PubMed:22932846). The isoform 2 may not be present in siliques.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). May be involved in PA accumulation in the dehydration stress response and in the transduction of hormonal and environmental signals to the microtubules cytoskeleton (PubMed:11549769, PubMed:11489173, PubMed:12881496). Prefers phosphatidylethanolamine to phosphatidylcholine as substrate (PubMed:12397060). Involved in H(2)O(2) and abscisic acid (ABA)-induced stomatal closure (PubMed:22589465, PubMed:22392280). Involved in nitric oxide (NO) signaling during stomatal closure (PubMed:22932846). Plays a positive role in ABA-promoted senescence (PubMed:23762411). Involved in basal defense and nonhost resistance (PubMed:23979971).
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
messages: Interacts with GAPC1 and GAPC2. Increased interaction in the presence of H(2)O(2).
messages: No visible phenotype when grown under standard conditions (PubMed:22932846). Loss of oleate-activated PLD activity and increased sensitivity to stress damage and to H(2)O(2)-induced cell death (PubMed:14508007). Hypersensitivity to hyperosmotic stress (PubMed:19017627). Impaired stomatal closure in response to nitric oxide donor (PubMed:22932846). Attenuated lipid degradation retarding abscisic acid (ABA)-promoted leaf senescence (PubMed:23762411). Decreased penetration resistance against non-host fungi (PubMed:23979971). No effect on ABA-induced stomatal closure (PubMed:22392280). Pldalpha1 and plddelta double mutants have a suppressed ABA-induced stomatal closure (PubMed:22392280).

3702:AT4G38700
gene id: 3702:AT4G38700
uniprot id: F4JUF8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT2G20360
gene id: 3702:AT2G20360
uniprot id: Q9SK66
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Belongs to the complex I NDUFA9 subunit family.
messages: Binds 1 FAD per subunit.
messages: Complex I is composed of at least 49 different subunits. This a component of the hydrophobic protein fraction.
messages: Mitochondrion matrix

3702:AT1G18890
gene id: 3702:AT1G18890
uniprot id: Q9M9V8
names: Activity Regulation
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: By drought and high-slat stress, but not by low-temperature, heat stress or abscisic acid treatment.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger. May be a positive regulator controlling stress signal transduction.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (327-357) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT4G22760
gene id: 3702:AT4G22760
uniprot id: P0C8Q5
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT2G22000
gene id: 3702:AT2G22000
uniprot id: A0A654EV09
uniprot id: Q9SIZ9
names: Function
names: Similarity
messages: Belongs to the brassicaceae elicitor peptide family.
messages: Elicitor of plant defense.

3702:AT1G06660
gene id: 3702:AT1G06660
uniprot id: F4IDQ5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Sequence Caution
messages: Diploid male spores in jason mutants give rise to viable diploid pollen grains and spontaneous triploid plants in the next generation.
messages: Diploid pollen grains (dyads of spores instead of tetrads) due to defective meiosis II. Abnormal spindle orientation at meiosis II.
messages: Required for normal spindle orientation at male meiosis II and normal formation of tetrad of microspores. Acts as positive regulator of PS1 in male sporogenesis. Not involved in female meiosis.
messages: Sequencing erros.

3702:AT4G26210
gene id: 3702:AT4G26210
uniprot id: A0A178V5J1
uniprot id: Q9STR3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase g subunit family.
messages: Membrane

3702:AT4G20310
gene id: 3702:AT4G20310
uniprot id: A0A0F6SCX9
uniprot id: A0A1P8B655
uniprot id: A0A1P8B657
uniprot id: A0A1P8B660
uniprot id: A0A384L4B3
uniprot id: F4JUU5
uniprot id: F4JUU6
uniprot id: F4JUU7
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase M50A family.
messages: Expressed in the vasculature of roots, cotyledons and leaves.
messages: Golgi apparatus membrane
messages: Metalloprotease that catalyzes the second step (site-2 cleavage) in the proteolytic activation of various factors, after site-1 cleavage. Part of a regulated intramembrane proteolysis (RIP) cascade. After ER stress, cleaves BZIP17 and BZIP28 proteins which functions as stress sensors and transducers in ER stress signaling pathway. The N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as proteins involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth.
messages: Short root and increased root branching. Mutant plants have increased sensitivity to salt-induced osmotic stress and tunicamycin.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G16090
gene id: 3702:AT3G16090
uniprot id: Q9LW77
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HRD1 family.
messages: Endoplasmic reticulum membrane
messages: Probable component of the HRD1 ubiquitin ligase complex that mediates the rapid degradation of misfolded endoplasmic reticulum (ER) proteins, a process called ER-associated degradation (ERAD). Targets the misfolded LRR receptor kinase BRI1. Functions redundantly with HRD3B.

3702:AT5G17620
gene id: 3702:AT5G17620
uniprot id: Q0WTP1
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Contributes to the assembly of the acentrosomal spindle and phragmoplast microtubule arrays as part of the augmin complex. Regulates the association of gamma-tubulin with the spindle and phragmoplast microtubules.
messages: Part of the augmin complex composed of 8 subunits. The complex acts on microtubules and interacts with gamma-tubulin in spindles and the phragmoplast.
messages: phragmoplast
messages: spindle

3702:AT2G46950
gene id: 3702:AT2G46950
uniprot id: F4IK45
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By salt stress.
messages: Highly expressed in siliques and at lower levels in flowers and rosette leaves.
messages: Involved in stress response (By similarity). Does not function as cytokinin hydroxylase in yeast heterologous system (Probable).
messages: It is uncertain whether Met-1 or Met-56 is the initiator.
messages: Membrane
messages: No visible phenotype under normal growth conditions.

3702:AT1G55640
gene id: 3702:AT1G55640
uniprot id: Q9ZWD1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PRA1 family.
messages: Endosome membrane
messages: Expressed in roots and lateral roots.
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.

3702:AT1G73560
gene id: 3702:AT1G73560
uniprot id: Q1PFD8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Expressed in ovules.
messages: Probable lipid transfer protein.

3702:AT3G55470
gene id: 3702:AT3G55470
uniprot id: Q9M2T2
names: Cofactor
names: Function
names: Induction
messages: Binds 3 Ca(2+) ions per C2 domain.
messages: Binds to both sense and antisense RNA (PubMed:29320165). Can also bind sheared DNA and dodecamer DNA with a low affinity (PubMed:29320165). Interacts with mesophyll plasmodesmata to mediate its own cell-to-cell transport and potentiate RNA trafficking (By similarity). May play a role in plant defense signaling (By similarity).
messages: Regulated by ARR2.

3702:AT2G24610
gene id: 3702:AT2G24610
uniprot id: A0A178VRA0
uniprot id: A0A1P8B1L6
uniprot id: Q9SJA4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Membrane
messages: Probable cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT1G19565
gene id: 3702:AT1G19565
uniprot id: P0C8P5
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.

3702:AT1G60660
gene id: 3702:AT1G60660
uniprot id: A0A5S9WRA3
uniprot id: O22704
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome b5 family.
messages: Membrane

3702:AT5G17850
gene id: 3702:AT5G17850
uniprot id: A0A5S9Y5Q9
uniprot id: Q9FKP2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/calcium exchanger (CCX) subfamily.
messages: Membrane
messages: Membrane-localized H(+)-dependent K(+) and Na(+) transporter.

3702:AT5G22070
gene id: 3702:AT5G22070
uniprot id: A0A178U8M9
uniprot id: Q9C581
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G11550
gene id: 3702:AT3G11550
uniprot id: A0A178VDH7
uniprot id: Q9CAX3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers with other CASP proteins. Interacts with CASP1, CASP3 and CASP4.
messages: Homodimer and heterodimers.
messages: Membrane
messages: Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

3702:AT1G05940
gene id: 3702:AT1G05940
uniprot id: A0A178WG13
uniprot id: A0A1P8AU02
uniprot id: A0A1P8AU13
uniprot id: A0A1P8AU30
uniprot id: Q9C5D6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Expressed in roots, stems, flowers, and leaves.
messages: Membrane
messages: Permease involved in the transport of the cationic amino acids.
messages: chloroplast membrane

3702:AT2G21470
gene id: 3702:AT2G21470
uniprot id: A0A5S9WZW4
uniprot id: F4IHI1
uniprot id: Q9SJT1
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin-activating E1 family.
messages: Embryonic lethal.
messages: Heterodimer of SAE1A or SAE1B and SAE2. The complex binds SUMO proteins via SAE2 (By similarity).
messages: Heterodimer.
messages: Nucleus
messages: Sequencing errors.
messages: The dimeric enzyme acts as an E1 ligase for SUMO1 and SUMO2. It mediates ATP-dependent activation of SUMO proteins and formation of a thioester with a conserved cysteine residue on SAE2.

3702:AT2G29150
gene id: 3702:AT2G29150
uniprot id: Q9ZW03
names: Function
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.
messages: Enantiospecific reductase active on cyclic monoterpenes and small flexible lipophilic carbonyls. No activity with tropinone, nitrogen-containing tropinone analogs, tropine or pseudotropine as substrate.

3702:AT1G61110
gene id: 3702:AT1G61110
uniprot id: Q8GY42
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed during pollen development and maturation.
messages: Expressed specifically in the tapetum.
messages: Nucleus
messages: Plants silencing NAC025 produce abnormally shaped seeds.
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.
messages: Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494).

3702:AT2G39770
gene id: 3702:AT2G39770
uniprot id: A0A178VW16
uniprot id: O22287
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family.
messages: Cytoplasm
messages: Embryo defective arrested at the cotyledon stage (PubMed:15266054). Deficient in N-glycosylation, altered in cytokinesis and cell wall architecture during embryogenesis. Mutants vtc1 and hsn1 with reduced enzyme activity show reduced root length and leaf cell size, reduced accumulation of ascorbate, increased sensitivity to ozone, UV-B and oxidative stresses, increased levels of abscisic acid (ABA), salicylic acid (SA) and resistance to virulent pathogens and root growth inhibition in the presence of NH(4)(+).
messages: Essential protein during embryogenesis (PubMed:15266054). Catalyzes a reaction of the Smirnoff-Wheeler pathway, the major route to ascorbate biosynthesis in plants. Plays an essential role in plant growth and development and cell-wall architecture. Provides GDP-mannose, used for cell wall carbohydrate biosynthesis, protein N-glycosylation, as well as for the biosynthesis of the antioxidant ascorbate.
messages: Interacts in vitro with CSN5A and CSN5B, but in planta only with CSN5B, which targets CYT1 for degradation in the dark by the 26S proteasome (PubMed:23424245). Forms homodimers in the unliganded structure (PubMed:35677252). The product-bound structure is composed of six dimers that form a dodecameric assembly (PubMed:35677252).
messages: Nucleus
messages: The N-terminus (1-40) is necessary for interaction with CNS5B.

3702:AT5G12060
gene id: 3702:AT5G12060
uniprot id: A0A178UE67
uniprot id: Q9FMQ4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G11830
gene id: 3702:AT5G11830
uniprot id: A0A178UEM1
uniprot id: Q9LYE8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT3G19000
gene id: 3702:AT3G19000
uniprot id: A0A384L8W2
uniprot id: F4J9Y8
uniprot id: Q9LJ66
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT1G08430
gene id: 3702:AT1G08430
uniprot id: A0A654E8W9
uniprot id: Q9SJE9
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: A reversible phosphorylation acting both at the transcriptional and post-transcriptional levels is required to activate malate release in response to aluminum.
messages: Activated by external aluminum.
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Cell membrane
messages: Essential factor for aluminum (Al) tolerance but does not represent the major Al tolerance QTL also found on chromosome 1. Acts in parallel but independently of MATE, an aluminum-activated root citrate transporter.
messages: Expressed in roots, but not in shoots. Detected in the root apex in absence of aluminum stress and in root apices, the stele and endodermis of the elongating zone of primary and lateral roots after aluminum stress. Not expressed in cortical and epidermal cells.
messages: Malate transporter critical for aluminum tolerance. The STOP1 transcription factor is required for ALMT1 expression.
messages: Membrane
messages: No visible phenotype when grown under normal conditions. Lack of aluminum-activated malate release and shorter roots when submitted to aluminum stress.
messages: Phosphorylated. A reversible phosphorylation is required for activation (By similarity).
messages: Up-regulated by aluminum. Small induction by erbium (Er) and low pH stress, but no induction by cadmium, copper, lanthanum or sodium.

3702:AT2G23660
gene id: 3702:AT2G23660
uniprot id: O64836
names: Similarity
messages: Belongs to the LOB domain-containing protein family.

3702:AT5G46290
gene id: 3702:AT5G46290
uniprot id: A0A178UMH0
uniprot id: F4KHF4
uniprot id: P52410
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids (By similarity).
messages: Homodimer.
messages: chloroplast stroma

3702:AT1G77570
gene id: 3702:AT1G77570
uniprot id: Q67XK8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HSF family.
messages: Nucleus

3702:AT2G44840
gene id: 3702:AT2G44840
uniprot id: Q8L9K1
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Strongly induced by wounding. Induced by Pseudomonas syringae tomato (both virulent and avirulent avrRpt2 strains), independently of PAD4. Also induced by methyl jasmonate (MeJA) independently of JAR1, but seems to not be affected by ethylene. Induction by salicylic acid (SA) is controlled by growth and/or developmental conditions, and seems to be more efficient and independent of PAD4 in older plants.
messages: Ubiquitously expressed after ethylene treatment.

3702:AT1G43080
gene id: 3702:AT1G43080
uniprot id: Q9C8C4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT3G13100
gene id: 3702:AT3G13100
uniprot id: A0A1I9LLY2
uniprot id: Q9LK62
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: By salicylic acid (SA).
messages: Membrane
messages: Pump for glutathione S-conjugates.
messages: Ubiquitous.

3702:AT1G43860
gene id: 3702:AT1G43860
uniprot id: A0A178W856
uniprot id: Q9MAR2
names: Similarity
messages: Belongs to the SDO1/SBDS family.

3702:AT3G18773
gene id: 3702:AT3G18773
uniprot id: A0A178VIT2
uniprot id: Q9LS99
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT3G26230
gene id: 3702:AT3G26230
uniprot id: Q9LTL8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT2G26400
gene id: 3702:AT2G26400
uniprot id: A0A1P8AZL0
uniprot id: A0A1P8AZL9
uniprot id: A0A1P8AZM1
uniprot id: O48707
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acireductone dioxygenase (ARD) family.
messages: Binds either 1 Fe or Ni cation per monomer. Iron-binding promotes an acireductone dioxygenase reaction producing 2-keto-4-methylthiobutyrate, while nickel-binding promotes an acireductone dioxygenase reaction producing 3-(methylsulfanyl)propanoate.
messages: Catalyzes 2 different reactions between oxygen and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
messages: Cytoplasm
messages: Nucleus

3702:AT2G05060
gene id: 3702:AT2G05060
uniprot id: Q9SI22
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G47870
gene id: 3702:AT5G47870
uniprot id: Q9FIJ4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RAD52 family.
messages: Expressed in roots and shoots. Expressed at low levels in cauline leaves, flower buds, flowers and siliques.
messages: Involved in double-stranded DNA break repair.
messages: Reduced fertility, increased sensitivity to mitomycin C, and decreased levels of intrachromosomal recombination.
messages: chloroplast

3702:AT1G07550
gene id: 3702:AT1G07550
uniprot id: C0LGD8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G06960
gene id: 3702:AT1G06960
uniprot id: A0A384LMW6
uniprot id: Q8H1S6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RRM U1 A/B'' family.
messages: Cajal body
messages: Component of the spliceosome where it is associated with snRNP U2.
messages: Cytoplasm
messages: Involved in nuclear pre-mRNA splicing.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleoplasm

3702:AT1G74470
gene id: 3702:AT1G74470
uniprot id: A0A178W817
uniprot id: Q9CA67
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the geranylgeranyl reductase family. ChlP subfamily.
messages: Catalyzes the reduction of geranylgeranyl diphosphate to phytyl diphosphate, providing phytol for both tocopherol and chlorophyll synthesis.
messages: Expressed during deetiolation and during chloroplast to chromoplast transformation.
messages: Part of the FLU-containing chloroplast membrane complex composed of FLU, CRD1, PORB, PORC, CHLP and HEMA1.
messages: chloroplast membrane

3702:AT2G45420
gene id: 3702:AT2G45420
uniprot id: A0A178VVX7
uniprot id: O22131
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: By auxin.
messages: During lateral root formation, expressed in the lateral root primordia, and the developing, emerged, and mature lateral roots.
messages: Expressed in roots, stems, leaves and flowers (PubMed:12068116, PubMed:24484953). Expressed in vascular tissues of hypocotyls, leaves, roots, developing floral organs and siliques (PubMed:19088331).
messages: Homodimer and heterodimer with LBD16 (PubMed:23430048). Interacts with GIP1 (PubMed:24484953).
messages: Involved in the positive regulation of tracheary element (TE) differentiation. Involved in a positive feedback loop that maintains or promotes NAC030/VND7 expression that regulates TE differentiation-related genes (PubMed:19088331). Functions in the initiation and emergence of lateral roots, in conjunction with LBD16, downstream of ARF7 and ARF19 (PubMed:19717544, PubMed:23749813). Transcriptional activator that directly regulates EXPA14, a gene encoding a cell wall-loosening factor that promotes lateral root emergence. Activates EXPA14 by directly binding to a specific region of its promoter (PubMed:22974309). Transcriptional activator that directly regulates EXPA17, a gene encoding a cell wall-loosening factor that promotes lateral root emergence (PubMed:23872272). Acts downstream of the auxin influx carriers AUX1 and LAX1 in the regulation of lateral root initiation and development (PubMed:26059335).
messages: Nucleus
messages: Plants over-expressing LBD18 have a dwarf and bushy phenotype, with short petioles, curled downward leaves, ectopic shoots from the adaxial side of cotyledons, shrunken root tips and disorganized columella cells.
messages: Reduced number of lateral roots.

3702:AT5G53680
gene id: 3702:AT5G53680
uniprot id: A0A178URQ3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G32720
gene id: 3702:AT4G32720
uniprot id: Q93ZV7
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds to the 3' poly(U) terminus of nascent RNA polymerase III transcripts, protecting them from exonuclease digestion and facilitating their folding and maturation.
messages: Embryonic-lethal with deficient embryos arrested at early globular stage of development characterized by nucleolar hypertrophy.
messages: Expressed ubiquitously (at protein level).
messages: nucleolus
messages: nucleoplasm

3702:AT1G69240
gene id: 3702:AT1G69240
uniprot id: A0A178W505
uniprot id: F4I0K9
names: Caution
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Methylesterase.
messages: Putative methylesterase.
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT3G17940
gene id: 3702:AT3G17940
uniprot id: A0A384KAZ8
uniprot id: Q9LVH6
names: Similarity
messages: Belongs to the aldose epimerase family.

3702:AT3G53150
gene id: 3702:AT3G53150
uniprot id: Q9SCP6
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT3G12360
gene id: 3702:AT3G12360
uniprot id: A0A178V8T3
uniprot id: A0A384LMN5
uniprot id: A0A654F7H2
uniprot id: Q9C7A2
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt and drought stresses.
messages: Cell membrane
messages: Expressed in roots, shoots, leaf vasculature and stems.
messages: Interacts with REM19/RTV1.
messages: Involved in salt stress tolerance. May act through abscisic acid (ABA) signaling pathways and promote reactive oxygen species (ROS) production.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant seedlings show increased salt-stress tolerance.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G54150
gene id: 3702:AT1G54150
uniprot id: A0A1P8AN81
uniprot id: A0A5S9WPM0
uniprot id: Q9SYH3
names: Function
names: Subcellular Location Annotation
messages: Membrane
messages: Possesses E3 ubiquitin-protein ligase activity.
messages: chloroplast outer membrane

3702:AT5G17070
gene id: 3702:AT5G17070
uniprot id: A0A1P8BA22
uniprot id: Q8VY58
names: Similarity
messages: Belongs to the PPP4R2 family.

3702:AT2G27130
gene id: 3702:AT2G27130
uniprot id: A0A178W142
uniprot id: Q9ZVC7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Membrane
messages: Preferentially expressed in the endodermis of hypocotyls and roots of seedlings, and in petals and anthers of inflorescences (PubMed:21558309). May also be expressed in siliques, carpels and pedicels (PubMed:21558309).
messages: Probable lipid transfer protein.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G61020
gene id: 3702:AT5G61020
uniprot id: A0A178UM32
uniprot id: A0A178UNW2
uniprot id: F4K1Z0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aberrant trichome branching with an increase in number of spikes (PubMed:29643069). The double mutant plants ect2 and ect3 exhibit delayed timing of leaf formation and altered leaf morphology (PubMed:29643069).
messages: Belongs to the YTHDF family.
messages: Cytoplasm
messages: Expressed in the shoot apex, at the sites of leaf formation, and in emerging leaves.
messages: Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability (Probable). M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (Probable). Required for the correct timing of leaf formation and normal leaf morphology (PubMed:29643069). Required for proper trichome branching and morphology (PubMed:29643069). Functions redundantly with ECT2 (PubMed:29643069).
messages: Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing.

3702:AT3G45470
gene id: 3702:AT3G45470
uniprot id: Q9M1G0
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT2G47500
gene id: 3702:AT2G47500
uniprot id: A0A178VYA6
uniprot id: A0A1P8B319
uniprot id: F4IL57
names: Caution
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02850
gene id: 3702:AT1G02850
uniprot id: A0A178W6X9
uniprot id: A0A2H1ZE91
uniprot id: A0A654E681
uniprot id: B3H5Q1
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT4G01600
gene id: 3702:AT4G01600
uniprot id: A0A1P8B757
uniprot id: Q9M122
names: Miscellaneous
names: Similarity
messages: Belongs to the GEM family.
messages: May be due to a competing donor splice site.

3702:AT2G29065
gene id: 3702:AT2G29065
uniprot id: P0C884
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GRAS family.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT3G45190
gene id: 3702:AT3G45190
uniprot id: A0A1I9LLZ2
uniprot id: A0A384KE02
uniprot id: F4J5I0
names: Similarity
messages: Belongs to the SAPS family.

3702:AT4G04090
gene id: 3702:AT4G04090
uniprot id: O81432
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT5G37450
gene id: 3702:AT5G37450
uniprot id: A0A1R7T3G3
uniprot id: C0LGU1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT5G64440
gene id: 3702:AT5G64440
uniprot id: A0A654GDY6
uniprot id: Q7XJJ7
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the amidase family.
messages: Catalyzes the hydrolysis of bioactive endogenous fatty acid amides to their corresponding acids (PubMed:12824167). The hydrolysis of endogenous amidated lipids terminates their participation as lipid mediators in various signaling systems (Probable). Converts a wide range of N-acylethanolamines (NAEs) to their corresponding free fatty acids and ethanolamine (PubMed:12824167, PubMed:16624618, PubMed:16738862, PubMed:16880402). Can use oleamide as substrate, but not indole-3-acetamide, 1-naphtalene-acetamide, nicotinic acid amide or L-asparagine (PubMed:16738862). Can use 2-arachidonylglycerol as substrate (PubMed:19801664). Participates in the regulation of plant growth (PubMed:16880402). Hydrolyzes N-dodecanoylethanolamine, which is has a growth inhibitory effect on seedling growth (PubMed:28112243). Involved in plant defense signaling (PubMed:18643971). Involved in abscisic acid (ABA) signaling through mechanisms that are independent of the catalytic activity (PubMed:19801664). Involved in the regulation of flowering time (PubMed:22645580). Catalyzes the hydrolysis of N-acyl L-homoserine lactones (AHLs), which are a class of signaling molecules produced by bacteria for quorum sensing (PubMed:24918118). Accumulation of L-homoserine appears to encourage plant growth at low concentrations by stimulating transpiration, but higher concentrations inhibit growth by stimulating ethylene production (PubMed:24918118).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves and flowers (PubMed:16738862). Expressed in seedlings, flowers, roots, siliques, seeds and leaves (PubMed:16880402).
messages: Forms homodimers.
messages: Inhibited by methyl arachidonyl fluorophosphonate (MAFP).
messages: No visible phenotype under normal growth conditions (PubMed:16880402). Enhanced sensitivity to inhibition of seedling growth induced by exogenous N-acylethanolamine.
messages: Plants overexpressing FAAH exhibit accelerated seedling growth (PubMed:16880402). Plants overexpressing FAAH exhibit enhanced susceptibility to the bacterial pathogen Pseudomons syringae pv tomato (PubMed:18643971). Plants overexpressing FAAH exhibit enhanced sensitivity to abscisic acid (ABA) (PubMed:19801664). Plants overexpressing FAAH exhibit early flowering (PubMed:22645580).
messages: Up-regulated during seed germination and early postgerminative seedling growth.

3702:AT3G27920
gene id: 3702:AT3G27920
uniprot id: P27900
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in leaves, stems and flowers (PubMed:11437443). Expressed in trichome cells and in leaf primordia (PubMed:9625690).
messages: Homodimer and heterodimer with MYB82 (PubMed:24803498). Interacts directly with GL3 and BHLH2. Part of a complex made of GL1, GL3 or BHLH2, and TTG1. Interacts also with BHLH2/EGL3/MYC146 and BHLH12/MYC1. Interacts with MYB82 (PubMed:24803498).
messages: Nucleus
messages: Transcription activator, when associated with BHLH2/EGL3/MYC146 or BHLH12/MYC1. Involved in epidermal cell fate specification in leaves. Together with TTG1 and GL3, promotes trichome formation and endoreplication. Regulates the production of a signal that induces hair (trichome) precursor cells on leaf primordia to differentiate. Binds to the WER-binding sites (WBS) promoter regions and activates the transcription of target genes (By similarity).
messages: Ubiquitous in young leaves primordia. Becomes more prominent in developing trichome cells but disappears progressively when trichomes begin to initiate branches.
messages: Up-regulated by gibberellins (PubMed:9625690). May be regulated by GEBP and GEBP-like proteins (PubMed:12535344).

3702:AT1G59650
gene id: 3702:AT1G59650
uniprot id: A0A178W611
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G25090
gene id: 3702:AT2G25090
uniprot id: A0A178W078
uniprot id: Q9SEZ7
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Downstream of CBL1, CBL2, CBL3 and CBL9, regulates by phosphorylation the K(+) conductance and uptake of AKT1.
messages: Part of a K(+)-channel calcium-sensing kinase/phosphatase complex composed by a calcium sensor CBL (CBL1, CBL2, CBL3 or CBL9), a kinase CIPK (CIPK6, CIPK16 or CIPK23), a phosphatase PP2C (AIP1) and a K(+)-channel (AKT1). Interacts with AKT1, CBL1, CBL2, CBL3 and CBL9.
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT1G27950
gene id: 3702:AT1G27950
uniprot id: A0A178WLV2
uniprot id: Q9C7F7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in seeds after imbibition (PubMed:23893219). High levels in the aerial portion of 10 days old seedlings. Accumulates in the epidermis during cuticle biosynthesis (e.g. in inflorescence stems). Also detected in flowers, in upper portion of the styles, pollen, veins of the sepals and petals, silique walls and seeds in the early stages of development (PubMed:23893219). In epidermis, present in trichomes, leaf mesophyll cells, and stem cortex and xylem.
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Lipid transfer protein that, together with LTPG2, binds to lipids and functions as a component of the cuticular lipid export machinery that performs extensive export of intracellular lipids (e.g. C29 alkane) from epidermal cells to the surface to build the cuticular wax layer and silique walls. Involved in the establishment of resistance to the necrotrophic fungal pathogen Alternaria brassicicola. Contributes to pre-invasive defense against some non-host powdery mildew pathogens by preventing the penetration of the epidermal cell wall by the fungal agents (e.g. Blumeria graminis f. sp. hordei (Bgh)) (PubMed:30102837). Maybe involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition (By similarity).
messages: Membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Reduced cuticular wax load on the stem surface and in silique walls, with altered cuticular lipid composition (especially C29 alkane) associated with diffuse cuticular layer structure. Increased number of plastoglobules in the stem cortex and leaf mesophyll cells, protrusions of the cytoplasm into the vacuole in the epidermis, and enhanced susceptibility to infection by the necrotrophic fungal pathogen Alternaria brassicicola. Increased susceptibility to penetration of the epidermal cell wall by the non-host mildew fungal agent Blumeria graminis f. sp. hordei (Bgh) (PubMed:30102837).
messages: Up-regulated in the epidermis of stems and leaves. Expressed in the epidermis, stem cortex, vascular bundles and mesophyll cells in root tips, cotyledons, seedlings, leaves, caulines, flowers, siliques, pollen, and early-developing seeds.
messages: cell wall

3702:AT1G59740
gene id: 3702:AT1G59740
uniprot id: A0A654EJH1
uniprot id: Q93VV5
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Down-regulated upon nematode infection.
messages: Expressed in flowers. Detected in roots and siliques.
messages: Membrane

3702:AT2G21300
gene id: 3702:AT2G21300
uniprot id: F4IGL2
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.

3702:AT1G14600
gene id: 3702:AT1G14600
uniprot id: A0A178WCG0
uniprot id: Q700D9
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Putative transcription factor.

3702:AT3G14230
gene id: 3702:AT3G14230
uniprot id: A0A5S9XC16
uniprot id: A0A7G2EI37
uniprot id: Q9LUM4
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Constitutive in flowers, leaves, stems, and roots.
messages: Interacts with MED25 and SINAT2.
messages: Lethal when homozygous.
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: Transcription factor involved in carotenoid biosynthesis regulation. Binds to the 5'-ATCTA-3' element present in the promoter of phytoene synthase (PSY) and phytoene desaturase (PDS). Involved in ethylene response and resistance to necrotrophic pathogens. Acts as a downstream regulator in the ethylene signaling pathway. Partially redundant with RAP2-12.
messages: Up-regulated by darkness, ethylene and Botrytis cinerea.

3702:AT4G30430
gene id: 3702:AT4G30430
uniprot id: A0A5S9XXA2
uniprot id: Q9M0B7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tetraspanin (TM4SF) family.
messages: May be involved in the regulation of cell differentiation.
messages: Membrane

3702:AT4G05180
gene id: 3702:AT4G05180
uniprot id: A0A178UX57
uniprot id: Q41932
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbQ family.
messages: Required for photosystem II assembly/stability and photoautotrophic growth under low light conditions.
messages: chloroplast thylakoid membrane

3702:AT3G61540
gene id: 3702:AT3G61540
uniprot id: Q9M314
names: Similarity
messages: Belongs to the peptidase S33 family.

3702:AT2G20660
gene id: 3702:AT2G20660
uniprot id: A0A178VPQ1
uniprot id: Q9SIU6
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Proteolytically cleaved, probably by S1P, a subtilisin-like serine protease (subtilase).
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G20100
gene id: 3702:AT4G20100
uniprot id: A0A178UX92
uniprot id: O49437
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G12360
gene id: 3702:AT5G12360
uniprot id: Q94CK6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Tissue Specificity
messages: Constitutive expression with no clear cell-cycle regulation.
messages: Expressed in somatic and reproductive tissues.
messages: No visible phenotype and no meiotic or pollen development defects. Pans1 and pans2 double mutants are lethal when homozygous.
messages: Not required for protection of centromeric cohesion.
messages: Patronus is Latin for protector.

3702:AT2G38390
gene id: 3702:AT2G38390
uniprot id: O80912
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: By methyl jasmonate, a plant defense-related signaling molecule.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT5G48170
gene id: 3702:AT5G48170
uniprot id: Q9LUB6
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Essential component of a SCF-type E3 ligase complex that positively regulates the gibberellin signaling pathway. Upon gibberellin treatment, such complex probably mediates the ubiquitination and subsequent degradation of DELLA proteins (GAI, RGA and RGL2), some repressors of the gibberellin pathway, leading to activate the pathway. Can partially complement the absence of GID2/SLY1.
messages: Highly expressed in flowers and at much lower level in seedlings, rosette leaves and green siliques.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex. Interacts directly with SKP1A and SKP1B.

3702:AT3G55340
gene id: 3702:AT3G55340
uniprot id: A0A384KSV0
uniprot id: Q9M3B8
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: Interacts with phragmoplastins (e.g. DRP1A, DRP1B, DRP1C, DRP1D and DRP1E) and with GTP-bound ARAC11/ROP1 as well as with Ran2 transcripts.
messages: Nucleus
messages: RNA-binding protein which mediates polarized mRNA (e.g. Ran2 transcripts mRNA) transport from the nucleus to the vicinity of the cell plate during cytokinesis and phragmoplast formation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: phragmoplast

3702:AT5G53950
gene id: 3702:AT5G53950
uniprot id: O04017
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By BRM and SYD, at the chromatin level, and conferring a very specific spatial expression pattern. Precise spatial regulation by post-transcriptional repression directed by the microRNA miR164.
messages: First expressed in early to mid-globular-stage embryos. In late globular stage, detected as a stripe running medially across the top of the embryo. In heart stage embryo, expression is restricted to a stripe between the cotyledon primordia, but confined to hypodermal cells. In the bending-cotyledon stage, localized in a region surrounding the SAM, that correspond to the boundary region of cotyledon margins (BCM) and the boundaries between SAM and cotyledons, including protoderm cells. Observed in the margins of leaf primordia, and later restricted to the leaf sinus region, with a diminution in outgrowing teeth. Restricted to the proximal part of mature leaves. Expressed at the boundaries between the inflorescence meristem (IM) and flower primordia. Once the flower starts to grow out and the internode begin to elongates, restricted to the axils of the floral pedicels through several nodes. Detected within floral primordia, between sepal primordia and the floral meristem. Also present at the boundaries of individual sepal primordia, as well as in the region surrounding each petal and stamen primordium. Later detected transiently at the boundaries between locules of each theca in anthers. Expression at the inner part of presumtive septal regions that raises to include presumptive placenta, at the tips of septal primordia, as septum grow. Localized in the fused region of the septum. Found at the boundaries of ovule primordia, and later at the boundary between the nucellus and the chalaza.
messages: Mostly expressed in buds and flowers, and, to a lower extent, in the aerial parts of seedling, inflorescence and old silique. In a general manner, present at the boundaries between mersitems and araising primordia.
messages: Nucleus
messages: The NAC domain includes a DNA-binding domain and a dimerization domain, and confers the specificity of the transactivated target genes.
messages: Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

3702:AT3G43670
gene id: 3702:AT3G43670
uniprot id: Q9M2B9
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the copper/topaquinone oxidase family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Binds 1 copper ion per subunit (By similarity). Can also use zinc ion as cofactor (By similarity).
messages: Contains 1 topaquinone per subunit.
messages: Copper amine oxidase that can use putrescine and spermidine as substrates.
messages: Expressed in roots, leaves and cotyledons.
messages: Homodimer.
messages: In young seedlings, expressed in hydathodes of new emerging leaves and cotyledons as well as in columella cells (PubMed:31862580). Also observed in hypocotyl/root junction, hypocotyls and in root apex (PubMed:31862580).
messages: Induced transiently by auxin (IAA) (PubMed:31862580). Induced during wounding, dehydration recovery, and treatment with putrescine (Put) (PubMed:31862580). Slightly and transiently repressed by jasmonic acid (MeJA), abscisic acid (ABA) and salicylic acid (SA), and drought (PubMed:31862580).
messages: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue.
messages: apoplast

3702:AT1G68290
gene id: 3702:AT1G68290
uniprot id: A0A5S9WQP7
uniprot id: Q9C9G4
names: Activity Regulation
names: Biotechnology
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the nuclease type I family.
messages: Binds 3 divalent metal cations (PubMed:23620482, Ref.7, PubMed:25157844). Use Mn(2+) and Ca(2+) as cofactors with ssDNA as substrate in basic conditions (pH 8) (PubMed:23620482). Can use Zn(2+) with lower efficiency with dsDNA and ssDNA as substrates in acidic conditions (pH 5.5) (PubMed:23620482, Ref.7, PubMed:25157844).
messages: Can be applied to high-throughput detection of single base mutation.
messages: Endonuclease mostly active on RNA and ssDNA, and to a lower extent, on dsDNA (PubMed:22506810, PubMed:23620482). Can cleave mismatch regions in heteroduplex DNA containing single base pair mismatches or insertion/deletion bases (PubMed:22506810). In contradiction with PubMed:22506810, cannot hydrolyze single-stranded DNA and does not cleave mismatches (PubMed:17651368).
messages: Monomer.
messages: N-glycosylation is required for enzymatic stability and activity.
messages: ssDNase activity is inhibited by the divalent cation chelator EDTA and the reducing agent DTT (PubMed:22506810). Divalent metal ions (e.g. Ca(2+), Mg(2+) and Zn(2+)) and DTT represses RNase activity (PubMed:22506810, PubMed:25157844). RNase activity is enhanced by EDTA (PubMed:22506810). Also repressed by vanadate (VO(4)(3-)) and phosphate (PO(4)(3-)) by occupying the active site (PubMed:25157844).

3702:AT3G20860
gene id: 3702:AT3G20860
uniprot id: A0A5S9XE52
uniprot id: Q9LT35
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
messages: May be involved in plant development processes.

3702:AT2G33670
gene id: 3702:AT2G33670
uniprot id: A0A178VYQ1
uniprot id: O22815
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT5G39050
gene id: 3702:AT5G39050
uniprot id: Q940Z5
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the plant acyltransferase family. Phenolic glucoside malonyltransferase subfamily.
messages: Malonyltransferase acting on xenobiotic glucosides. Has activity toward 2-Naphthol glucoside (2NAG), 1-Naphthol glucoside (1NAG), kaempferol 7-O-glucoside, kaempferol 3-O-glucoside, hydroxycoumarin glucosides, phenol-glucosides and isoflavone glucoside (daidzin), but not toward 4-coumaroyl glucoside, kaempferol 3,7-O-diglucoside, salicylic acid glucoside and phlorizin. In vivo, seems to be involved in the malonylation of 2-Naphthol glucoside while PMAT2 would be involved in the malonylation of 4-methylumbelliferone glucoside or 4-nitrophenyl glucoside.
messages: No visible phenotype, but no malonylation of glucosides.

3702:AT5G62000
gene id: 3702:AT5G62000
uniprot id: A0A654GD70
uniprot id: F4K536
uniprot id: Q94JM3
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Promotes flowering, stamen development, floral organ abscission and fruit dehiscence. Functions independently of ethylene and cytokinin response pathways. May act as a repressor of cell division and organ growth.
messages: Belongs to the ARF family.
messages: Expressed in the sepals and carpels of young flower buds. At stage 10 of flower development, expression in the carpels becomes restricted to the style. Also expressed in anthers and filaments. At stage 13, expressed in the region at the top of the pedicel, including the abscission zone. Expressed in developing siliques.
messages: Expressed in the whole plant.
messages: Homodimers and heterodimers.
messages: Homodimers and heterodimers. Interacts with ARF1.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Large, dark green rosette leaves, delayed flowering, thick and long inflorescence, abnormal flower morphology and sterility in early formed flowers, but fertility in late-formed flowers. Delayed senescence and abscission. Increased seed size and weight, and extra cell division and expansion in many organs.
messages: Nucleus
messages: Was originally erroneously termed IAA26 and IAA30 (Ref.5).

3702:AT2G19870
gene id: 3702:AT2G19870
uniprot id: Q8W497
names: Similarity
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.

3702:AT2G02050
gene id: 3702:AT2G02050
uniprot id: A0A178VYI9
uniprot id: Q9SKC9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFB7 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Contains two C-X9-C motifs that are predicted to form a helix-coil-helix structure, permitting the formation of intramolecular disulfide bonds.
messages: Membrane
messages: Mitochondrion
messages: Mitochondrion inner membrane
messages: Mitochondrion intermembrane space

3702:AT4G36130
gene id: 3702:AT4G36130
uniprot id: A0A178UYN8
uniprot id: Q42064
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

3702:AT5G45560
gene id: 3702:AT5G45560
uniprot id: Q8VZF6
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Binds to phosphatidylinositol-4-phosphate (PtdIns(4)P). May regulate the salicylic acid- (SA-) mediated resistance to pathogens (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Endosome membrane
messages: The pleckstrin homology domain (3-110) binds to phosphatidylinositol-4-phosphate (PtdIns(4)P).

3702:AT5G17560
gene id: 3702:AT5G17560
uniprot id: A0A178UCM7
uniprot id: Q9LF68
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BolA/IbaG family.
messages: Belongs to the bolA/yrbA family.
messages: Interacts in vitro with GRXS14, GRXS15, GRXS16 and GRXS17, but not with GRXC5 (PubMed:24203231). Interacts in vivo only with GRXS14, GRXS15 and GRXS16 (PubMed:24203231).
messages: May act either alone or in interaction with glutaredoxin as a redox-regulated transcriptional regulator, or as a factor regulating Fe-S cluster biogenesis.
messages: Mitochondrion
messages: chloroplast

3702:AT1G69460
gene id: 3702:AT1G69460
uniprot id: A0A178WJ06
uniprot id: Q8VY92
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EMP24/GP25L family.
messages: Endoplasmic reticulum membrane
messages: Golgi stack membrane
messages: Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side (By similarity).
messages: Membrane
messages: Probably oligomerizes with other members of the EMP24/GP25L family. Associates with the COPI vesicle coat (coatomer). Associates with the COPII vesicle coat (coatomer).
messages: The cytoplasmic C-terminal domain contains a functional dilysine-retrieval motif, which is involved in the retrograde Golgi-to-ER transport of the protein.
messages: The lumenal coiled-coil domain is required for the Golgi subcellular location.
messages: cis-Golgi network membrane

3702:AT5G13230
gene id: 3702:AT5G13230
uniprot id: A0A178UQD2
uniprot id: Q9LYV3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Mitochondrion

3702:AT4G38300
gene id: 3702:AT4G38300
uniprot id: Q9SVF5
names: Similarity
messages: Belongs to the glycosyl hydrolase 10 (cellulase F) family.

3702:AT4G09320
gene id: 3702:AT4G09320
uniprot id: A0A178UXQ6
uniprot id: P39207
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Interacts with CAT1, CAT2 and CAT3.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. Plays a role in response to reactive oxygen species (ROS) stress.
messages: Nucleus
messages: Peroxisome
messages: Plants over-expressing NDK1 are more tolerant to paraquat and have increased ability to eliminate exogenous H(2)O(2).

3702:AT5G21920
gene id: 3702:AT5G21920
uniprot id: Q9C595
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YggT family.
messages: No visible phenotype under normal growth conditions.
messages: Not required for the biogenesis and accumulation of native cytochrome b6 in the thylakoid membrane. Not functionally involved in the pathway for covalent binding of the c-type heme to cytochrome b6.
messages: chloroplast thylakoid membrane

3702:AT5G48520
gene id: 3702:AT5G48520
uniprot id: A0A1P8BBQ1
uniprot id: Q0WQE7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAUS3 family.
messages: Involved in microtubules reorganization during spindle and phragmoplast development. Required for gamma-tubulin localization during mitosis.
messages: Lethal when homozygous.
messages: Part of the augmin complex composed of 8 subunits (PubMed:22505726). The complex acts on microtubules and interacts with gamma-tubulin in spindles and the phragmoplast (PubMed:22505726). Interacts with AUG1 (PubMed:21750235).
messages: phragmoplast
messages: spindle

3702:AT4G33240
gene id: 3702:AT4G33240
uniprot id: Q0WUR5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A number of isoforms are produced. According to EST sequences.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Endosome membrane
messages: Leaf-curling phenotype. Root growth inhibition, root gravitropic response, and hyposensitivity to exogenous auxin. Fab1a and fab1b double mutant displays an abnormal vacuolar phenotype late in pollen development leading to inviable pollen (PubMed:19846542).
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity). Plays an important role in maintenance of endomembrane homeostasis including endocytosis, vacuole formation, and vacuolar acidification processes. Required for development of viable pollen. Might mediate recycling of auxin transporters.
messages: Ubiquitous with highest expression levels in pollen, seed, and senescent leaves.

3702:AT2G39705
gene id: 3702:AT2G39705
uniprot id: A0A178VQG8
uniprot id: Q8S8S3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT3G03470
gene id: 3702:AT3G03470
uniprot id: A0A654F4W3
uniprot id: Q9SRQ1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Impaired accumulation of non-fluorescent dioxobilin-type chlorophyll catabolites (NDCCs) compensated by higher amounts of non-fluorescent chlorophyll catabolites (NCCs) in senescing leaves.
messages: Involved in the chlorophyll breakdown by its action in nonpolar primary fluorescent chlorophyll catabolite (pFCC) decarbonylation (Ref.6, PubMed:23723324). Involved in the formation of major chlorophyll breakdown products, including non-fluorescent dioxobilin-type chlorophyll catabolites (NDCCs), during leaf senescence (PubMed:23723324).

3702:AT1G53520
gene id: 3702:AT1G53520
uniprot id: Q9C8L2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the chalcone isomerase family.
messages: Embryo lethal.
messages: Expressed in developing cotyledons, young seedlings, roots, seeds, embryos, macrospores, preanthesis and tapetum. Restricted to developing and reproductive tissues.
messages: Fatty-acid-binding protein. Interacts with most fatty acids tested and has maximal relative affinity for C16:0.
messages: chloroplast stroma

3702:AT5G61170
gene id: 3702:AT5G61170
uniprot id: A0A384KY83
uniprot id: Q67ZX8
uniprot id: Q9FNP8
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS19 family.

3702:AT5G52350
gene id: 3702:AT5G52350
uniprot id: F4KG58
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Alteration of root gravitropic responses (e.g. delay, auxin-dependent root directional growth and larger variation of root tip angles) resulting in deeper root system architecture (RSA) and enhanced drought resistance (PubMed:31299202). Disturbed PIN4 distribution in columella cells associated with a perturbation of the auxin distribution pattern and an asymmetric accumulation of DR5 in the downward peripheral layer under gravistimulus (PubMed:31299202).
messages: Associated with natural variation of agravitropic root growth upon auxin transport perturbation with N-1-naphtylphthalamic acid (NPA).
messages: Belongs to the EXO70 family.
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion (PubMed:31299202). Involved in PIN4 exocytosis and gravitropic responses in columella cells (PubMed:31299202). By monitoring PIN4 distribution in columella cells, modulates auxin repartition and subsequently regulates the root system architecture (RSA), thus being a component of the auxin-dependent root directional growth (ARD) (PubMed:31299202).
messages: Confined to the outer layer of the columella cells in the root tips of young seedlings.
messages: Membrane
messages: Subunit of the exocyst complex.

3702:AT5G19120
gene id: 3702:AT5G19120
uniprot id: A0A654G2T9
uniprot id: Q93VG3
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT5G01160
gene id: 3702:AT5G01160
uniprot id: Q9LFC0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Hakai family.
messages: Interacts with MTB and VIR (PubMed:28503769). Associates with MTA, MTB, FIP37 and VIR to form the m6A writer complex which is essential for adenosine methylation at specific mRNA sequences (PubMed:28503769).
messages: Nucleus speckle
messages: Probable E3 ubiquitin-protein ligase which is a subunit of the N6-methyltransferase complex, a multiprotein complex that mediates N6-methyladenosine (m6A) methylation at the 5'-[AG]GAC-3' consensus sites of some mRNAs (PubMed:28503769). Associates with MTA, MTB, FIP37 and VIR to form the m6A writer complex which is essential for adenosine methylation at specific mRNA sequences (PubMed:28503769). N6-methyladenosine (m6A) plays a role in mRNA stability, processing, translation efficiency and editing (PubMed:28503769).
messages: nucleoplasm

3702:AT3G49250
gene id: 3702:AT3G49250
uniprot id: Q94A79
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of the RNA-directed DNA methylation (RdDM) machinery, probably by facilitating an RNAi-mediated epigenetic modification involving secondary siRNAs and spreading of DNA methylation, thus leading to gene silencing. Involved in the assembly of RNA polymerase V (Pol V) transcription initiation or elongation complexes at the chromatin, as a component of the DDR complex. Required for de novo DNA methylation.
messages: Homodimer. Part of the chromatin-remodeling complex (DDR complex) that contains at least DRD1, DMS3 and RDM1. Interacts with CPL1. The DDR complex recruits/activates the RNA polymerases V and acts during siRNA-directed DNA methylation (RdDM) (PubMed:18541146, PubMed:20409711, PubMed:22560611). Interacts with SUVH2 (PubMed:24465213). Binds to DMS11 and stimulates its ATPase activity (PubMed:22560611).
messages: Nucleus
messages: Very low levels of RNAi-mediated methylation and derepression of silenced genes. Impaired RNA polymerase V-chromatin associations (Pol V). The mutant idn1-1 fails to establish DNA methylation and exhibits a late-flowering phenotype.

3702:AT4G36190
gene id: 3702:AT4G36190
uniprot id: A4VCL8
names: Similarity
messages: Belongs to the peptidase S28 family.

3702:AT1G58360
gene id: 3702:AT1G58360
uniprot id: Q42400
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Amino acid-proton symporter. Stereospecific transporter with a broad specificity for histidine, glutamate and neutral amino acids. Reduced affinities for asparagine and valine. Involved in amino acid uptake from the apoplastic cavity into the embryo cells for storage protein accumulation and in root amino acid uptake.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane
messages: Expressed in endosperm during early stages of seed development. Strongly induced at heart stage of embryogenesis.
messages: Highly expressed in developing pods. Found in the endosperm and in the storage parenchyma and the outer epidermis cells of the developing embryo. Lower levels of expression in flowers, in the vascular system of the cotyledon and in the root epidermal cells, including root hairs and throughout the root tip.
messages: Inhibited by carbonylcyanide m-chlorophenylhydrazone and diethylpyrocarbonate (DEPC).
messages: No effect on plant growth or seed germination, but reduced seed weight and total seed yield. Resistant to toxic concentrations of amino acids in the growth medium.

3702:AT5G56140
gene id: 3702:AT5G56140
uniprot id: Q9FKT4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G36480
gene id: 3702:AT4G36480
uniprot id: Q94IB8
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
messages: Defective Embryo and pollen lethality. RNAi mutants display plant size reduction, altered leaf morphology and increases in relative amounts of saturated sphingolipid long-chain bases.
messages: Endoplasmic reticulum membrane
messages: Heterodimer with LCB2 (LCB2a or LCB2b). Component of the serine palmitoyltransferase (SPT) complex, composed of LCB1 and LCB2 (LCB2a or LCB2b).
messages: Serine palmitoyltransferase (SPT). The heterodimer formed with LCB2 constitutes the catalytic core. Involved in the regulation of the programmed cell death (PCD) signaling pathway. Plays an important role during male gametogenesis and embryogenesis.
messages: The fbr11-1 mutant is incapable of initiating programmed cell death (PCD) after induction by fumonisin B1 (FB1), a specific inhibitor of ceramide synthase.
messages: Ubiquitous.

3702:AT2G46320
gene id: 3702:AT2G46320
uniprot id: A0A1P8B2F4
uniprot id: A0A5S9X878
uniprot id: F4II70
uniprot id: F4II71
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT3G19770
gene id: 3702:AT3G19770
uniprot id: Q9LT31
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Embryonic lethality when homozygous. Embryogenesis arrested at the torpedo stage.
messages: Functions as guanine nucleotide exchange factor (GEF) for Rab small GTPases. Activates specifically RABF1, RABF2A and RABF2B proteins. Required for early stages of embryogenesis, cytokinesis, embryogenesis, and organ development. Is essential for the establishment or maintenance of the polar localization of the auxin efflux carrier PIN1.
messages: Homodimer. The homodimer interacts with RABF2B. Interacts with RABF1 and RABF2A.
messages: Widely expressed.

3702:AT5G07190
gene id: 3702:AT5G07190
uniprot id: Q9LYP6
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed from the late torpedo stage to late cotyledon stage in developing embryo.
messages: Expressed in seeds. Expression is restricted to the developing embryo.
messages: May play a role during embryo development.
messages: Secreted

3702:AT5G48410
gene id: 3702:AT5G48410
uniprot id: A0A1P8BHG9
uniprot id: A0A1P8BHH2
uniprot id: A0A1P8BHI4
uniprot id: Q9FH75
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane

3702:AT4G09110
gene id: 3702:AT4G09110
uniprot id: A0A178V1A5
uniprot id: Q9M0R6
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G20480
gene id: 3702:AT3G20480
uniprot id: Q8LEA0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LpxK family.
messages: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses (Potential).
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions, but plants lacking LPXK accumulate high levels of disaccharide-1-phosphate (DS-1-P).

3702:AT1G15790
gene id: 3702:AT1G15790
uniprot id: A0A1P8AV92
uniprot id: A0A1P8AVD7
uniprot id: A0A384K8Y6
uniprot id: Q9LMQ5
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G04920
gene id: 3702:AT3G04920
uniprot id: A0A178VB55
uniprot id: A0A1I9LMY7
uniprot id: Q9SS17
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS24 family.

3702:AT1G75540
gene id: 3702:AT1G75540
uniprot id: Q9LQZ7
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Enhanced number of emerged lateral roots.
messages: Interacts with COP1, HY5 and BBX32. Interacts with FLZ1 (PubMed:24901469).
messages: Nucleus
messages: Transcription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414).

3702:AT2G18450
gene id: 3702:AT2G18450
uniprot id: A0A178VRF6
uniprot id: Q9ZPX5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
messages: Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.
messages: Expressed at a low level.
messages: Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
messages: Mitochondrion inner membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G41520
gene id: 3702:AT2G41520
uniprot id: A0A178VZX6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G46900
gene id: 3702:AT5G46900
uniprot id: A0A178U9G5
uniprot id: Q39100
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT1G63810
gene id: 3702:AT1G63810
uniprot id: Q0WVM5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NRAP family.
messages: nucleolus

3702:AT1G34470
gene id: 3702:AT1G34470
uniprot id: A0A178W3W5
uniprot id: Q9LNK7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity).
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).
messages: Belongs to the NIPA (TC 2.A.7) family.
messages: Cell membrane
messages: Early endosome
messages: Endosome
messages: Homodimer.
messages: Membrane

3702:AT4G38970
gene id: 3702:AT4G38970
uniprot id: A0A178UW98
uniprot id: F4JUJ5
uniprot id: Q944G9
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: By glucose and sucrose (PubMed:22561114). Induced by drought stress (PubMed:22561114).
messages: Can be trimethylated at Lys-394 by LSMT-L. The methylation level has no influence on the ologomerization state or on the kinetic properties of the enzyme.
messages: Highly expressed in rosettes leaves.
messages: Homotetramer.
messages: Phosphorylated on tyrosine residues in response to abscisic acid (ABA) in germinating seeds.
messages: Plays a key role in glycolysis and gluconeogenesis.
messages: Reduced growth rate. Unability to accumulate starch in leaves during daylight.
messages: chloroplast stroma
messages: plastoglobule

3702:AT4G00040
gene id: 3702:AT4G00040
uniprot id: O81305
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Endoplasmic reticulum
messages: Homodimer.
messages: Plant type III polyketide synthases (PKSs) that catalyzes the condensation of malonyl-CoA units with various CoA ester starter molecules to generate a diverse array of natural products including long-chain alkyl alpha-pyrones.

3702:AT1G68660
gene id: 3702:AT1G68660
uniprot id: Q9SX29
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ClpS family.
messages: Expressed exclusively in photosynthetic green tissues with high levels in young, developing leaf tissues.
messages: Interacts with CLPC1 (via N-terminus) and CLPC2, but not with CLPt1 or CLPT2 (PubMed:23898032). Binds to ClpF; this interaction stimulates their association with ClpC (PubMed:26419670).
messages: No visible phenotype (Ref.6, PubMed:23898032). Weak chloroplast phenotype under short-day conditions (PubMed:23898032).
messages: Not detected in senescing leaves.
messages: Small adapter protein that modulate the activity of CLPC (By similarity). Involved in plastid biogenesis in particular when chloroplast protein synthesis capacity is a limiting factor (PubMed:23898032). Probably involved in substrate selection for plastid Clp protease system (PubMed:23898032). Recruitment to ClpC chaperones is facilitated by CLPF thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC) (PubMed:26419670).
messages: chloroplast stroma

3702:AT1G27250
gene id: 3702:AT1G27250
uniprot id: O04572
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G45070
gene id: 3702:AT3G45070
uniprot id: A0A1I9LRV5
uniprot id: A0A1I9LRV6
uniprot id: Q9M1V2
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Expressed in inflorescence stems, roots and siliques.
messages: Expressed mostly in 5-day old seedlings, at developmental stage 1.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to specifically catalyze the sulfate conjugation of flavones and flavonols. Strictly specific for the position 7. Substrate preference is kaempferol 3-sulfate > isorhamnetin > kaempferol.
messages: Up-regulated by trans-zeatin, but not by cold, heat, hypoxia, salt stress, auxins, gibberellins, wounding, etiolation and salicylic acid or methyl jasmonate treatments.

3702:AT3G17850
gene id: 3702:AT3G17850
uniprot id: F4J6F6
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: May be involved in root hair elongation.

3702:AT4G38090
gene id: 3702:AT4G38090
uniprot id: A0A178UZY7
uniprot id: B3H5Q9
uniprot id: B9DG41
uniprot id: Q84WL1
names: Similarity
messages: Belongs to the IMPACT family.

3702:AT2G04305
gene id: 3702:AT2G04305
uniprot id: A0A178VUA2
uniprot id: Q8RY06
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
messages: Membrane

3702:AT5G06600
gene id: 3702:AT5G06600
uniprot id: F4K3X1
uniprot id: Q9FPT1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the peptidase C19 family.
messages: Interacts with SIC/RON3.
messages: May be due to a competing acceptor splice site.
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity). Positive regulator of root meristem development that, together with UBP13, prevents the ubiquitination and turnover of RGFR1 induced by the RGF1 hormone peptide, thus influencing PLT1 and PLT2 expression (PubMed:29339500).
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.
messages: The double mutant ubp12 ubp13 roots are completely insensitive to exogenous applied hormone peptide RGF1 associated with an accelerated RGF1-induced ubiquitination and turnover of RGFR1 and are characterized by a reduced number of cortical meristem cells and disturbed PLT1 and PLT2 expression.

3702:AT1G80340
gene id: 3702:AT1G80340
uniprot id: A0A654ES55
uniprot id: Q9ZT84
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA3OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Converts the inactive gibberellin (GA) precursors GA9 and GA20 in the bioactives gibberellins GA4 and GA1 (PubMed:9836749). Involved in the production of bioactive GA for vegetative growth and development (PubMed:16460513).
messages: Expressed in germinating seeds and in very young seedlings. Declines to low levels during later stages of development.
messages: Highly expressed in seedlings but also expressed in roots, leaves, stems, flowers, siliques and seeds. Detected predominantly in the hypocotyl and roots of young seedlings and in the petioles and vasculature of leaves. Not expressed in the shoot apical meristem, but found in the elongation zone, the quiescent center cells and the columella cells of the root tips. Found in the cortex and the endodermis of the embryo axis in germinating seeds.
messages: No visible phenotype; probably due to redundancy with GA3OX1. Ga3ox1 and ga3ox2 double mutant has a severe defect in seed germination and root growth, and a dwarf phenotype.
messages: Not under feedback regulation. Regulated by phytochrome. Induced by red light pulse and reaches its maximum level after 12 hours. Transcriptionally regulated by LEAFY COTYLEDON2 and FUSCA3. Not regulated by cold treatment or auxin. Up-regulated by paclobutrazol.

3702:AT2G34350
gene id: 3702:AT2G34350
uniprot id: Q0WMV5
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G05165
gene id: 3702:AT3G05165
uniprot id: A0A1I9LTG5
uniprot id: A0A654F9J0
uniprot id: B9DGB5
uniprot id: F4J661
uniprot id: Q94AF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT2G20230
gene id: 3702:AT2G20230
uniprot id: Q93XY5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the tetraspanin (TM4SF) family.
messages: Expressed in rosette leaves.
messages: Homodimer. Constituent of tobamovirus replication complex (By similarity).
messages: May be involved in the regulation of cell differentiation.
messages: Membrane
messages: Promotes intracellular multiplication of tobamoviruses, probably being a component of the replication complex.
messages: Slightly reduced efficiency of intracellular multiplication of tobamoviruses (e.g. crucifer strain TMV-Cg), characterized by a reduced amplification of TMV-related RNAs.
messages: Vacuole membrane

3702:AT5G44030
gene id: 3702:AT5G44030
uniprot id: A0A068FIL6
uniprot id: A0A1R7T3H5
uniprot id: A0A1R7T3H6
uniprot id: Q84JA6
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening.
messages: Cell membrane
messages: Confined to secondary cell wall developing tissues such as xylems and interfascicular regions. Expressed in roots, hypocotyls, leaves, inflorescences and flowers.
messages: Enhanced resistance to the pathogens Ralstonia solanacearum and Plectosphaerella cucumerina.
messages: Interacts with CESA7 and CESA8. Assembly with CESA7 and CESA8 is required for functional complex and localization in secondary cell wall deposition sites. Interacts with STL1 and STL2, but not with GOT1 (PubMed:27277162).
messages: Membrane
messages: Not expressed in embryos. In young leaves, localized in transient patches along the vascular system. In young inflorescence stems, observed in vascular bundles of primary xylems. In maturing inflorescence stems, most pronounced in regions of developing interfascicular fibers.
messages: S-acylated.

3702:AT2G03450
gene id: 3702:AT2G03450
uniprot id: A0A178VVI9
uniprot id: Q9ZQ81
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G60460
gene id: 3702:AT3G60460
uniprot id: A0A178VEK7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Confined to inflorescences, especially in stamens and pollen.
messages: Loss of male fertility. Reduced expression of germline-specific genes (e.g. MGH3, GEX2 and GCS1) (PubMed:19300502). Blocked generative cell division resulting in the formation of bicellular pollen grains at anthesis. Pollen fails to enter mitosis at G2-M transition associated with reduced levels of CYCB1-1. Blocked generative cell division followed by endocycle during pollen maturation leads to single larger diploid sperm cell unable to perform fertilization (PubMed:15694308, PubMed:15618418, PubMed:19300502, PubMed:24876252). Enhanced polytubey (e.g. multiple pollen tubes entering ovules) (PubMed:22608506).
messages: Nucleus
messages: Repressed by the microRNA 159 (miR159); the production of miR159 is stimulated by the anaphase promoting complex/cyclosome (APC/C) (PubMed:21441434). Activated by ARID1 in male germline cells via specific histone acetylation regulation (e.g. H3K9Ac) (PubMed:25057814).
messages: Strict spatial and temporal transcriptional activation leading to a specific expression in the male germline cells; this specific expression pattern is dependent of the regulatory region of DUO1 (ROD1) 5'-YAACYGY-3' in its promoter (PubMed:15694308, PubMed:27624837). First observed in the germ cell during or soon after engulfment by the vegetative cell, just after asymmetric division. In maturating pollen, accumulates in germ cells before mitosis and remains high in mature sperm cells. Expression persists during pollen development (PubMed:19300502).
messages: Transcription activator that acts as a positive regulator of male germline development by promoting both gametic cell specification and cell cycle progression (PubMed:15694308, PubMed:15618418, PubMed:19300502, PubMed:21285328). Binds to canonical MYB sites 5'-AACCGTC-3', 5'-AAACCGC-3' and 5'-AACCGT-3' in promoters to trigger the expression of male germline-specific or enriched genes (e.g. MGH3, GEX2 and GCS1), including those required for fertilization (PubMed:21285328, PubMed:19300502). Required for sperm cell specification leading to pollen maturation by activating a germline-specific regulon (PubMed:21285328, PubMed:15694308, PubMed:15618418, PubMed:19300502). Involved in pollen mitosis entry at G2-M transition via the regulation of CYCB1-1, DAZ1 and DAZ2 expression (PubMed:15618418, PubMed:19300502, PubMed:24876252).

3702:AT2G43870
gene id: 3702:AT2G43870
uniprot id: A0A178VV55
uniprot id: O22817
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G02460
gene id: 3702:AT4G02460
uniprot id: A0A1P8B7A4
uniprot id: A0A1P8B7A7
uniprot id: A0A1P8B7A8
uniprot id: Q941I6
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DNA mismatch repair MutL/HexB family.
messages: Expressed at very low levels in mature leaves. Detected in rapidly dividing tissues.
messages: Heterodimer of MLH1 and PMS1, called MutLalpha, which is the major MMR MutL activity correcting base-base mismatches as well as IDLs. The heterodimer binds double strand DNA independently of a mismatch with positive cooperativity and has more than one DNA binding site. Forms a ternary complex with either the MSH2-MSH6 (MutSalpha) or the MSH2-MSH3 heterodimer (MutSbeta), which recognize and bind to mismatch DNA. Ternary complex formation is promoted by ATP binding.
messages: May be due to a competing acceptor splice site and an intron retention.
messages: Nucleus
messages: Reduced fertility. Increased homeologous recombination frequency.
messages: Required for DNA mismatch repair (MMR), correcting base-base mismatches and insertion-deletion loops (IDLs) resulting from DNA replication, DNA damage or from recombination events between non-identical sequences during meiosis. Component of the MutLalpha heterodimer that forms a ternary complex with the MutS heterodimers, which initially recognize the DNA mismatches. This complex is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis. Plays a major role in maintaining the genetic stability of simple sequence repeats and in the repair of heteroduplex sites present in meiotic recombination intermediates. Does not seem to be required for homologous somatic recombination.

3702:AT1G80350
gene id: 3702:AT1G80350
uniprot id: A0A384L792
uniprot id: Q0WR11
uniprot id: Q9SEX2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AAA ATPase family. Katanin p60 subunit A1 subfamily.
messages: Expressed ubiquitously, including siliques, flowers, leaves, stems and roots.
messages: May homooligomerize (PubMed:12571277). Component of KTN80-KTN1 complexes composed of a hexamer of KTN1-KTN80 heterodimers that sense microtubule (MT) geometry to confer precise MT severing (PubMed:28978669). Interacts directly with KTN80.1, KTN80.2, KTN80.3 and KTN80.4 (PubMed:28978669). Can interact with KTN80.1 (PubMed:12571277). May interact with the kinesin related protein KIN14A (PubMed:12571277). Interacts with microtubule polymers (PubMed:12571277). Binds to IPGA1 (PubMed:35975703).
messages: Severe dwarf phenotype, with small and round dark-green rosette leaves as well as wide and short petioles (PubMed:35975703, PubMed:28978669). The ipga1-2 ktn1-4 and an-t1 ktn1-4 double mutants have an enhanced phenotype of pavement cells, resembling soap bubbles and no lobe formation (PubMed:35975703).
messages: Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
messages: Severs microtubules in vitro in an ATP-dependent manner. Required for oligomerization of functional KTN80-KTN1 complexes that catalyze microtubule severing (PubMed:28978669). This activity may promote rapid reorganization of cellular microtubule arrays. May be required for reorientation of cortical microtubule arrays during cellular elongation. Failure to correctly orient these arrays drastically compromises fiber length, cell wall thickness and mechanical strength. May also be required for the spatial organization of developmental cues within the root. Involved in the IPGA1- and AN-dependent regulation of pavement cells morphogenesis leading to puzzle shape (PubMed:35975703).
messages: cytoskeleton

3702:AT1G30550
gene id: 3702:AT1G30550
uniprot id: A0A178W982
uniprot id: F4I6D1
uniprot id: F4I6D2
names: Caution
names: Similarity
messages: Belongs to the methyltransferase superfamily. Trimethylguanosine synthase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G04130
gene id: 3702:AT5G04130
uniprot id: Q94BZ7
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.
messages: Belongs to the type II topoisomerase GyrB family.
messages: Binds two Mg(2+) per subunit. The magnesium ions form salt bridges with both the protein and the DNA. Can also accept other divalent metal cations, such as Mn(2+) or Ca(2+).
messages: Made up of two chains. The A chain is responsible for DNA breakage and rejoining; the B chain catalyzes ATP hydrolysis.
messages: May be due to an intron retention.
messages: Mitochondrion

3702:AT1G76140
gene id: 3702:AT1G76140
uniprot id: F4I2A0
uniprot id: F4I2A1
names: Similarity
messages: Belongs to the peptidase S9A family.

3702:AT1G61600
gene id: 3702:AT1G61600
uniprot id: A0A178WJ03
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G51440
gene id: 3702:AT1G51440
uniprot id: Q9C8J6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acylhydrolase that catalyzes the hydrolysis of phosphatidylcholine at the sn-1 position. Moderate activity toward phosphatidylcholine (PC), monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and triacylglycerol (TAG).
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Highly expressed in flowers. Lower levels in seedlings, leaves and stems.
messages: No visible phenotype under standard growth phenotype.
messages: Not induced by wounding (PubMed:18267087). Slightly induced by wounding (PubMed:24430866).
messages: chloroplast

3702:AT3G18790
gene id: 3702:AT3G18790
uniprot id: A0A384KQ28
uniprot id: Q9LS97
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ISY1 family.
messages: Nucleus

3702:AT1G55720
gene id: 3702:AT1G55720
uniprot id: Q9LFZ8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/proton exchanger (CAX) subfamily.
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase (By similarity).
messages: Vacuole membrane

3702:AT1G51490
gene id: 3702:AT1G51490
uniprot id: A0A2H1ZED6
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT5G04290
gene id: 3702:AT5G04290
uniprot id: F4JW79
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Decrease in the accumulation of several 24-nt RNAs (PubMed:19343051). Reduced DNA methylation and released silencing of RNA-directed DNA methylation (RdDM) target loci promoters (e.g. LTI78/RD29A, YKT61/AtGP1 and AtMU1) without abolishing the siRNA triggers (PubMed:19410546, PubMed:19343051, PubMed:21738482). Suppression of gene silencing mediated by ROS1 disruption in the double mutants ros1 rdm3-1, ros1 rdm3-2 and ros1 rdm3-3 (PubMed:19410546). Loss in non-CG methylation at DRM2-dependent sites (PubMed:21150311). Reduced H3K9me2 at IGN5 and IGN26 loci (PubMed:21738482).
messages: Effector of RNA-directed DNA methylation (RdDM) triggered by small interfering RNAs (siRNAs, 24-nt RNAs). Functions as an adapter protein that binds scaffold transcripts generated by polymerase V and recruits AGO4 and AGO4-bound siRNAs to form an RdDM effector complex (PubMed:19410546, PubMed:19343051). Promotes the expression of 24-nt RNAs (PubMed:19343051). Required for the initial establishment of DNA methylation (PubMed:21150311). Together with AGO4, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci (PubMed:21738482).
messages: Interacts with AGO4 via its C-terminal region and with RNA transcripts (PubMed:19410546, PubMed:19343051). Binds chromatin at loci subject to transcriptional silencing downstream of RNA Polymerase V, but independently from the presence of 24-nt siRNA (PubMed:21738482).
messages: Nucleus
messages: nucleoplasm

3702:AT4G13090
gene id: 3702:AT4G13090
uniprot id: Q9SV60
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: May catalyze xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: apoplast
messages: cell wall

3702:AT3G08530
gene id: 3702:AT3G08530
uniprot id: A0A178VB65
uniprot id: Q0WLB5
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the clathrin heavy chain family.
messages: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). Mediates endocytosis and is required for a correct polar distribution of PIN auxin transporters.
messages: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
messages: Clathrin triskelions, composed of 3 heavy chains and 3 light chains, are the basic subunits of the clathrin coat (By similarity). Interacts with CLC2 and TPLATE. Interacts with EDR4 (PubMed:25747881).
messages: Cytoplasmic vesicle membrane
messages: Defective in bulk endocytosis as well as in internalization of prominent plasma membrane proteins. Defects in constitutive endocytic recycling of PIN auxin transporters and their polar distribution in embryos and roots leading to altered auxin distribution patterns and associated auxin transport-related phenotypes. Defective in embryonic and postembryonic development.
messages: Membrane
messages: The C-terminal third of the heavy chains forms the hub of the triskelion. This region contains the trimerization domain and the light-chain binding domain involved in the assembly of the clathrin lattice.
messages: The N-terminal seven-bladed beta-propeller is formed by WD40-like repeats, and projects inward from the polyhedral outer clathrin coat. It constitutes a major protein-protein interaction node (By similarity).
messages: Was assigned to CHC1 in PubMed:21187379.
messages: coated pit

3702:AT1G79520
gene id: 3702:AT1G79520
uniprot id: A0A1P8AN90
uniprot id: A0A384KTH2
uniprot id: A0A5S9WVT3
uniprot id: F4IF62
uniprot id: Q9SAJ7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
messages: Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuole membrane

3702:AT2G34570
gene id: 3702:AT2G34570
uniprot id: Q8L8C2
names: Subcellular Location Annotation
messages: nucleolus

3702:AT2G33160
gene id: 3702:AT2G33160
uniprot id: A0A654EZU1
uniprot id: O49319
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT2G38940
gene id: 3702:AT2G38940
uniprot id: A0A178VRB1
uniprot id: Q96303
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although related to the sugar transporter family, it does not transport sugars.
messages: Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.
messages: Cell membrane
messages: High-affinity transporter for external inorganic phosphate. Acts as a H(+):phosphate symporter in both low- and high-Pi conditions. Confers sensitivity to arsenate.
messages: In roots by phosphate starvation. Repressed by the Pi analog phosphite (Phi).
messages: Interacts with NLA.
messages: Membrane
messages: Mostly expressed in roots, in tissues connecting the lateral roots to the primary root. Also present in flowers, in senescing anther filaments and in the abscission zone at the base of siliques. Expressed in hydathodes and axillary buds, and in some senescing leaves. After Pi starvation, localized in all cells of undifferentiated root segments, including root tips and root hairs, and in the epidermis, cortex and stellar regions of mature root segments.
messages: Ubiquitinated by NLA. Ubiquitination of PHT1-4 leads to its degradation by the proteasome.

3702:AT1G53708
gene id: 3702:AT1G53708
uniprot id: F4HTB2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT2G23000
gene id: 3702:AT2G23000
uniprot id: A0A178VYK6
uniprot id: O64810
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in senescent leaves.
messages: In cv. Pna-10, this protein SCP10 and the adjacent SCP8 are not present due to a natural 13-kb deletion (PubMed:19969522).
messages: Involved in the biosynthesis of sinapoylated anthocyanins.
messages: Lack of sinapoylated anthocyanins.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Was classified as a serine carboxypeptidase-like (SCPL) protein solely on the basis of the overall sequence similarity (PubMed:15908604) but it has been shown that it belongs to a class of enzymes that catalyze acyltransferase reactions (PubMed:17600138).

3702:AT3G24270
gene id: 3702:AT3G24270
uniprot id: Q9LK18
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT5G39130
gene id: 3702:AT5G39130
uniprot id: A0A654G797
uniprot id: Q9FIC8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT3G06790
gene id: 3702:AT3G06790
uniprot id: A0A178VJ70
uniprot id: Q84JZ6
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MORF family.
messages: Heterodimer with MORF1 (PubMed:22411807, PubMed:25583991). Homodimer and heterodimers with MORF8/RIP1, MORF4/RIP4 and MORF5/RIP5 (PubMed:25583991).
messages: Involved in organellar RNA editing. Required for the processing of RNA editing sites in mitochondria.
messages: Mitochondrion
messages: Retarded growth.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G05490
gene id: 3702:AT1G05490
uniprot id: F4I8S3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF2/RAD54 helicase family.
messages: Interacts with NRPD1.
messages: Nucleus
messages: Probable chromatin remodeling factor.

3702:AT4G03240
gene id: 3702:AT4G03240
uniprot id: A0A178V3B4
uniprot id: Q9ZR07
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the frataxin family.
messages: Mitochondrion
messages: Monomer. Oligomer (By similarity). Interacts with NIFS1 (PubMed:22511606).
messages: Promotes the biosynthesis of heme as well as the assembly and repair of iron-sulfur clusters by delivering Fe(2+) to proteins involved in these pathways (PubMed:17092311). May play a role in the protection against iron-catalyzed oxidative stress through its ability to catalyze the oxidation of Fe(2+) to Fe(3+) (PubMed:17092311). May be able to store large amounts of the metal in the form of a ferrihydrite mineral by oligomerization (PubMed:17092311). Binds to the mitochondrial cysteine desulfurase NIFS1 and increases its activity (PubMed:22511606).

3702:AT2G18560
gene id: 3702:AT2G18560
uniprot id: F4IQK7
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT2G46700
gene id: 3702:AT2G46700
uniprot id: Q9ZUZ2
names: Activity Regulation
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Binds calmodulin (CaM) in a calcium-dependent manner. Interacts with GLN1-1.
messages: By abscisic acid (ABA) and during leaf senescence.
messages: Cytoplasm
messages: During flower development, abundantly present in the apical meristem. During pollen development, there are high levels in pollen mother cells and it accumulates gradually to reach a peak during the tetrad stage. Fades out in mature pollen. Also present in tapetal cells and at stigmatic surface of the stigma.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger (By similarity). Serine/threonine kinase that phosphorylates histone H3 an GLN1-1.
messages: Membrane
messages: Not activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity. Stimulated by magnesium ions (optimum at 10-15 mM) and manganese ions.
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (409-439) inactivates kinase activity under calcium-free conditions (By similarity).
messages: Ubiquitously expressed with higher levels in siliques and roots, especially at the root cap. Particularly present in vascular bundles of stems and leaves.

3702:AT1G17840
gene id: 3702:AT1G17840
uniprot id: A0A178WKJ6
uniprot id: Q8RXN0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Bushy phenotype (PubMed:24112720). Abnormal cuticle and pollen grain shapes, reduced levels of wax and cutin monomers, unusual lipidic cytoplasmatic inclusions in epidermal cells, inter-organ postgenital fusions, and altered morphology of trichomes and pavement cells (PubMed:24112720, PubMed:20035035). Altered petal and silique morphology, fusion of seeds, and changes in levels of cutin monomers in flowers and siliques associated with the suppression of the expression of a large number of cuticle-associated genes (PubMed:20035035). Altered root suberin composition, as well as root expression of suberin biosynthetic genes (PubMed:20035035). Highly susceptibility to salt and reduced root branching. Excess in sterol (e.g. campesterol) composition (PubMed:24112720). Vascular patterning defects in cotyledons and the floral stem, with a stronger phenotype in plant missing also ABCG9 and ABCG14 (PubMed:24112720). Both single and double mutants abcg11 abcg12 exhibit ABCG12-containing membrane inclusions protruded into the vacuole and contiguous with the endoplasmic reticulum (PubMed:20870961).
messages: By light, NaCl, abscisic acid (ABA), wounding, and glucose stresses. Repressed by H(2)O(2) and cytokinin.
messages: Cell membrane
messages: Expressed in seedlings, roots, stems, leaves, flowers, and siliques, mostly in epidermis, trichomes, vasculatures and developing tissues (PubMed:14730060, PubMed:17727615, PubMed:17951461, PubMed:17989085, PubMed:24112720, PubMed:20035035). Follows an uniparental maternal expression in the seed, thus being the product of a maternally expressed imprinted gene (PubMed:21838868). Accumulates in the phloem (PubMed:24112720). Transcripts seem to be transported from shoots to roots (PubMed:27247031).
messages: First observed in seed coat and the endosperm (PubMed:20035035). Displays a polar localization in the embryo protoderm (PubMed:20035035). During embryo development, expressed in the radical tip. In seedlings, localized in the cotyledons, root tip, and young leaves. As secondary root tips emerge, expressed in the pericycle during the initial cell divisions. In leaves, mostly detected in the expanding basal portion, trichomes and stomatal cells. Present in rosette leaves vascular system and epidermis (PubMed:24112720). In roots of mature plants, mainly expressed in lateral root primordia and developing lateral roots (PubMed:24112720). Accumulates in buds and open flowers, mainly in the petal epidermis and the vasculature (PubMed:20035035). In the inflorescence, found in all floral organs, predominantly in the anthers, styles, and young siliques, particularly in young seeds (PubMed:20035035). Upon anthesis and later, progressively restricted to the carpel. Also observed in phloem cells of the flower stem, and in the cortical cells and interfascicular fibers (PubMed:24112720). Accumulates during tracheary element differentiation (PubMed:28921082).
messages: Homodimer (PubMed:24112720, PubMed:20870961). Forms heterodimers with ABCG9, ABCG12 and ABCG14 in epidermal cells (PubMed:24112720, PubMed:20870961).
messages: Membrane
messages: Required for the cuticle, root suberin and pollen coat development by controlling cutin and maybe wax transport to the extracellular matrix (PubMed:24112720, PubMed:20035035). Involved in developmental plasticity and stress responses. Together with ABCG9 and ABCG14, required for vascular development by regulating lipid/sterol homeostasis (PubMed:24112720). May be a transporter of lignin precursors during tracheary element differentiation (PubMed:28921082).

3702:AT3G19910
gene id: 3702:AT3G19910
uniprot id: A0A178VK20
uniprot id: Q9LT17
names: Caution
names: Function
names: PTM
messages: Auto-ubiquitinated.
messages: E3 ubiquitin-ligase probably involved in organ size regulation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G48890
gene id: 3702:AT5G48890
uniprot id: A0A178UK76
uniprot id: Q9FKA9
names: Developmental Stage
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a transcriptional repressor. Prevents the photoperiodic and circadian clock-dependent transition to flowering in long days (LD) by repressing the expression of flowering time genes (e.g. FT, GI and CO) in the leaf vasculature, and by interfering with floral meristem identity genes at the apex (e.g. SOC1 and LFY).
messages: Contains a slightly degenerated ERF-associated amphiphilic repression (EAR) motif, which may be involved in the activity of transcriptional repression.
messages: In seedlings, present in cotyledons and in the hypocotyl. Later expressed specifically in the leaf vasculature, the vegetative shoot apical meristem and emerging leaf primordia. At the onset of flowering, observed at the shoot apex, but excluded from the first visible floral buds of the bolting inflorescence. In flowers, confined to the vasculature of the sepals.
messages: Mostly expressed in leaves and flower buds, and, to a lower extent, in seedlings and shoot apex, but not in roots and floral primordia.
messages: Nucleus

3702:AT1G36060
gene id: 3702:AT1G36060
uniprot id: A0A7G2DV85
uniprot id: Q9SKW5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G52600
gene id: 3702:AT1G52600
uniprot id: A0A178W7C4
uniprot id: Q9SSR2
names: Similarity
messages: Belongs to the peptidase S26B family.

3702:AT1G28230
gene id: 3702:AT1G28230
uniprot id: Q9FZ96
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Cell membrane
messages: Highly expressed in leaves, stems and flowers, lower in siliques and not detected in roots (PubMed:10662864, PubMed:12662305). Expressed in the epithem of hydathodes and the stigma surface of siliques (PubMed:12662305, PubMed:23551747).
messages: Inhibited by diethylstilbestrol, N,N'-dicyclohexylcarbodiimide, carbonyl cyanide m-chlorphenyl-hydrazone and 2,4-dinitrophenol. Competitive inhibition of adenine transport by isopentenyladenine, cytosine, cytidine, hypoxanthine, kinetin, zeatin, nicotine and caffeine, but not by zeatin riboside or kinetin riboside.
messages: Proton-coupled purine transporter mediating adenine and trans-zeatin uptake (PubMed:12662305). High affinity transporter for pyridoxine involved in the uptake of vitamin B6 (PubMed:23551747). Also able to transport caffeine and adenosine (PubMed:12662305). May be involved in the uptake of cytokinin, caffeine and nicotine from the xylem sap into shoot tissues (PubMed:12662305).

3702:AT1G74700
gene id: 3702:AT1G74700
uniprot id: Q8LGU7
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase Z family.
messages: Besides the tightly bound Zn(2+) ion, TRZ1 requires additional Ca(2+), Mn(2+) or Mg(2+) for pre-tRNA processing, while bpNPP hydrolysis occurs without addition of metal ions but is stimulated 2- to 3-fold when free Mn(2+) or Zn(2+) ions are added.
messages: Cytoplasm
messages: Homodimer.
messages: No visible phenotype when grown under standard conditions.
messages: The C-terminus (270-280) is essential for tRNA binding and processing activity.
messages: Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity (PubMed:12032089, PubMed:16118225, PubMed:18052196, PubMed:19411372). Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (PubMed:12032089, PubMed:18052196, PubMed:19411372). Can use bis-(p-nitophenyl) phosphate (bpNPP) as substrate (PubMed:18052196). Involved in the processing of small nucleolar RNAs (snoRNAs) (PubMed:19420328).

3702:AT5G04530
gene id: 3702:AT5G04530
uniprot id: Q9LZ72
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Expressed in siliques.
messages: Membrane
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Down-regulated by low temperature, osmotic stress, salt and darkness (PubMed:18465198).

3702:AT5G49460
gene id: 3702:AT5G49460
uniprot id: A0A178UM28
uniprot id: Q9FGX1
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. May supply substrate to the cytosolic acetyl-CoA carboxylase, which generates the malonyl-CoA used for the synthesis of a multitude of compounds, including very long chain fatty acids and flavonoids. Required for normal growth and development and elongation of C18 fatty acids to C20 to C24 fatty acids in seeds. n contrast to all known animal ACL enzymes having a homomeric structure, plant ACLs are composed of alpha and beta chains.
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Expressed in flower buds at stage 6 of development in tapetal cells and at stage 10 in the epidermal cells of growing petals and ovaries. In young siliques, expressed transiently in the inner integument of the ovules just prior to testal deposition. Expressed in the developing embryo with a maximal level at the heart and torpedo stages. The expression then disappears in the mature embryo. During seed germination, expressed in the vascular bundles, apical meristem, epidermis of the seedling cotyledon, stem, and root. Highly expressed in the root tip of seedlings 4 days after imbibition.
messages: Expressed in trichomes, epidermal leaf cells, anther tapetal cells, stigma and in young vascular bundles of expanding leaves, cotyledons, roots, pedicel of flowers and siliques.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: cytosol

3702:AT5G61150
gene id: 3702:AT5G61150
uniprot id: Q9FNQ0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LEO1 family.
messages: Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3) (PubMed:20363855). Involved in regulation of flowering time. Required for the expression of the flowering repressor and MADS box gene FLC (PubMed:12207655). Involved in the control of seed dormancy and germination (PubMed:21799800).
messages: Component of the nuclear PAF1 complex (PAF1C), which consists of VIP2/ELF7/PAF1, VIP3/SKI8/WDR61, VIP4/LEO1, VIP5/RTF1, VIP6/ELF8/CTR9 and CDC73 (PubMed:20363855). Interacts with VIP3 and VIP6 (PubMed:15472079).
messages: Early flowering, defects in floral morphology in whorls 1-3, but fully fertile flowers (PubMed:12207655). Reduced seed dormancy and increased germination rate of freshly harvested seeds (PubMed:21799800).
messages: Expressed in roots, shoot apices, stems, cauline leaves, inflorescence apices and flowers.
messages: Nucleus

3702:AT4G03340
gene id: 3702:AT4G03340
uniprot id: A0A1P8B7U8
uniprot id: A0A654FLI3
uniprot id: Q9ZQZ7
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G47430
gene id: 3702:AT5G47430
uniprot id: A0A384KLG9
uniprot id: A0A384LLY2
uniprot id: B9DFV2
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G35080
gene id: 3702:AT4G35080
uniprot id: A0A178UUX5
uniprot id: Q94A99
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: In flowers, strongly expressed in mature pollen and ovules.
messages: Mostly expressed in leaves and flowers, to a lower extent, in stems, roots, floral bud, inflorescence and siliques, and, barely, in seedlings.
messages: Plastid membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Together with CGF2, essential protein which supports female gametogenesis and embryogenesis, probably by securing local energy supply.
messages: Various vegetative defects, including reduced leaf size, dwarfism, and abnormal cell death (PubMed:32306898). Plants lacking both CGF1 and CGF2 are impaired for female gametogenesis and embryogenesis, and have abnormal leaf morphology with yellow patches associated with an altered chloroplast integrity; this phenotype is rescued by sucrose treatment (PubMed:32306898).
messages: chloroplast membrane

3702:AT1G31440
gene id: 3702:AT1G31440
uniprot id: Q9C865
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Cytoplasmic vesicle
messages: Endoplasmic reticulum
messages: Highly expressed in flowers. Detected in seedlings, roots, leaves and stems.
messages: Interacts with the auxilin-like protein AUXI1.
messages: Lipid binding protein bound strongly to phosphatidic acid, phosphatidylinositol-4-phosphate and phosphatidylinositol-4,5-bisphosphate. Binds actin in vitro. Involved in trafficking and modification of clathrin-coated vesicles.
messages: clathrin-coated vesicle
messages: trans-Golgi network

3702:AT3G55600
gene id: 3702:AT3G55600
uniprot id: A0A654FG32
uniprot id: Q6NKR3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the USE1 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G23460
gene id: 3702:AT1G23460
uniprot id: A0A1P8AMU9
uniprot id: A0A654ECG2
uniprot id: F4I672
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT1G51100
gene id: 3702:AT1G51100
uniprot id: Q9C685
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Biogenesis factor component of the plastidial NDH subcomplex A.
messages: Required for both formation and activity of the chloroplast NAD(P)H dehydrogenase (NDH) complex of the photosynthetic electron transport chain (PubMed:22274627). Functions in assembly or stabilization of the NDH complex; probably involved, together with NdhO and NdhH, in the formation of an NDH subcomplex A assembly intermediate (NAI500) (PubMed:22274627).
messages: Specifically defective in the accumulation of subcomplex A, a stroma-protruding arm of the chloroplast NADH dehydrogenase-like complex (NDH).
messages: chloroplast
messages: chloroplast stroma

3702:AT3G56710
gene id: 3702:AT3G56710
uniprot id: Q9LDH1
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By light (PubMed:11943170). Accumulates in response to infection with the bacterial pathogen Pseudomonas syringae (PubMed:20040062). Induced by infection with the necrotrophic fungal pathogen B.cinerea (PubMed:21990940).
messages: Contributes to plant defense. May regulate chloroplast metabolism upon infection with pathogens such as Pseudomonas syringae (PubMed:20040062). Functions as activator of WRKY33 in plant defense against necrotrophic pathogens by stimulating the DNA-binding activity of WRKY33 (PubMed:21990940).
messages: Expressed in leaves and roots, but not in flowers.
messages: Interacts with the sigma factor SIGA in chloroplast (PubMed:11943170). Interacts with WRKY25 and WRKY33 in the nucleus (PubMed:21990940).
messages: No visible phenotype under normal growth conditions, but mutant plants show impaired induction of some defense-related genes triggered by pathogen infection and treatments with salicylic acid (SA) and jasmonic acid (JA) (PubMed:20040062). Increased susceptibility to the necrotrophic fungal pathogen B.cinerea (PubMed:21990940).
messages: Nucleus
messages: chloroplast

3702:AT4G14276
gene id: 3702:AT4G14276
uniprot id: A0A178V5Y5
uniprot id: P0CAX9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G25940
gene id: 3702:AT4G25940
uniprot id: Q8VYT2
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT4G01060
gene id: 3702:AT4G01060
uniprot id: Q9M157
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in leaf epidermal cells, stomate guard cells in leaves, cotyledons and hypocotyls, inflorescences, developing seeds and siliques.
messages: Increased number or trichomes and reduced number of root hairs.
messages: MYB-type transcription factor involved in epidermal cell fate specification. Acts as a negative regulator of trichome development, including endoreplication, by mediating lateral inhibition. Promotes the formation of hair developing cells in H position in root epidermis, probably by inhibiting non-hair cell formation. May have pleiotropic effects on flowering development and epidermal cell size through the regulation of endoreduplication.
messages: Nucleus
messages: Overexpression of ETC3 results in the suppression of trichomes and overproduction of root hairs, as observed for CPC, TRY, ETC1 and ETC2.

3702:AT1G19150
gene id: 3702:AT1G19150
uniprot id: A0A178WEZ5
uniprot id: Q8LCQ4
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: Photoregulated by reversible phosphorylation of its threonine residues.
messages: Slightly lower NDH activity in immature leaves. No chlorophyll fluorescence increase in mature leaves. Smaller version of the NAD(P)H dehydrogenase-photosystem I supercomplex (NDH-PSI) supercomplex (PubMed:19903870). In the double mutant lhca5 lhca6, drastic reduction of NDH subunits accumulation upon increased light intensity (PubMed:21278308).
messages: The LHC complex consists of chlorophyll a-b binding proteins (PubMed:19903870). Homodimer. Binds pigments (By similarity). Element of the NAD(P)H dehydrogenase-photosystem I supercomplex (NDH-PSI) (PubMed:19903870).
messages: The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. Seems involved in the function of the photosystem I in low light conditions, when other LHCA proteins are less abundant. Required, together with LHCA5, for the formation of a full-size NAD(P)H dehydrogenase-photosystem I supercomplex (NDH-PSI) that triggers cyclic and chlororespiratory electron transport in chloroplast thylakoids, especially under stress conditions (e.g. increased light intensity).
messages: chloroplast thylakoid membrane

3702:AT5G58000
gene id: 3702:AT5G58000
uniprot id: A0A178UL80
uniprot id: A0A384LMB4
uniprot id: Q56X72
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G14930
gene id: 3702:AT3G14930
uniprot id: Q93ZB6
names: Function
names: Induction
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the uroporphyrinogen decarboxylase family.
messages: Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
messages: Homodimer.
messages: May be due to a competing acceptor splice site.
messages: Sequencing errors.
messages: Up-regulated by light. Not regulated by circadian rhythm.
messages: chloroplast

3702:AT5G19460
gene id: 3702:AT5G19460
uniprot id: Q8VXZ0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in leaves and inflorescences.
messages: No visible phenotype under normal growth conditions.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.
messages: chloroplast

3702:AT3G10480
gene id: 3702:AT3G10480
uniprot id: A0A178VJ71
uniprot id: Q9SQX9
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts with JMJ14 and NAC052.
messages: Mostly expressed in floral organs, and, at low levels, in other organs.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: The double mutant nac050 nac052 exhibits early flowering and increased H3K4 methylation on specific genes, thus leading to their derepression (PubMed:25578968). Impaired RNA-mediated gene silencing (PubMed:26617990).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional repressor that binds to the motif 5'-(C/T)A(C/A)G-3' in the promoter of target genes (PubMed:25578968). Binds also to the 5'-CTTGNNNNNCAAG-3' consensus sequence in chromatin (PubMed:26617990). Can bind to the mitochondrial dysfunction motif (MDM) present in the upstream regions of mitochondrial dysfunction stimulon (MDS) genes involved in mitochondrial retrograde regulation (MRR) (PubMed:24045019). Together with NAC051/NAC052 and JMJ14, regulates gene expression and flowering time by associating with the histone demethylase JMJ14, probably by the promotion of RNA-mediated gene silencing (PubMed:25578968, PubMed:26617990).

3702:AT5G45610
gene id: 3702:AT5G45610
uniprot id: A0A178U969
uniprot id: C8KI33
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates throughout the root tip.
messages: Becomes more restricted to the distal region of the root tip upon addition of aluminum (Al).
messages: Belongs to the serpin family.
messages: Cytoplasm
messages: Forms multimers through the coiled-coil domain.
messages: Hypersensitivity to DNA-damaging agents including UVB, gamma-radiation, aphidicolin, ionizing radiation and hydroxyurea (HU) (PubMed:19619159, PubMed:19619158). Defective in cell-cycle G2/M arrest in response to DNA damage (PubMed:19619159, PubMed:19619158). Reversed extreme hypersensitivity to aluminum (Al) of the mutant als3-1, including Al-dependent terminal differentiation of the root tip and transition to endoreduplication. Increased tolerance to Al (PubMed:28556304).
messages: Nucleus
messages: Probably phosphorylated by ATR.
messages: Required for tolerance to DNA-damaging and cross-linking agents such as UVB irradiation, gamma-radiation, aphidicolin, ionizing radiation and hydroxyurea (HU), cisplatin (CDDP) and mitomycin C (MMC) (PubMed:19619159, PubMed:19619158, PubMed:28556304). Involved in cell-cycle G2/M arrest in response to DNA damage (PubMed:19619159, PubMed:19619158). Required for aluminum-dependent gene regulation and root growth inhibition in an ATR-dependent manner by halting cell cycle progression and triggering loss of the quiescent center (QC) (PubMed:28556304).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G70850
gene id: 3702:AT1G70850
uniprot id: A0A384KEJ8
uniprot id: Q9SSK7
names: Caution
names: Similarity
messages: Belongs to the MLP family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G31640
gene id: 3702:AT1G31640
uniprot id: Q9C6V4
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with AGL62.
messages: Nucleus
messages: Putative transcription factor.

3702:AT2G39795
gene id: 3702:AT2G39795
uniprot id: Q8W487
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MAM33 family.
messages: Mitochondrion matrix

3702:AT5G27090
gene id: 3702:AT5G27090
uniprot id: B3H507
uniprot id: Q9S9U2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G21540
gene id: 3702:AT1G21540
uniprot id: Q9LPK6
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Expressed in leaves, flowers and developing seeds.
messages: May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.

3702:AT5G65090
gene id: 3702:AT5G65090
uniprot id: A0A654GE84
uniprot id: B3H480
uniprot id: Q66GQ6
names: Disruption Phenotype
names: Function
names: Similarity
messages: Affected root hair morphogenesis.
messages: Belongs to the inositol polyphosphate 5-phosphatase family.
messages: May be involved in the regulation of root hairs development. Required for restricting both the size of the root-hair initiation site and the width of the root hairs during the transition to tip growth, but is not required for normal subsequent tip growth.

3702:AT4G19990
gene id: 3702:AT4G19990
uniprot id: A0A1P8B4E0
uniprot id: A0A1P8B4E2
uniprot id: A0A1P8B4E6
uniprot id: A0A2H1ZEP3
uniprot id: F4JU19
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FHY3/FAR1 family.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.

3702:AT5G20810
gene id: 3702:AT5G20810
uniprot id: Q2V359
uniprot id: Q8GWV6
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G13670
gene id: 3702:AT5G13670
uniprot id: A0A654G0Q2
uniprot id: Q9FNA5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT1G67100
gene id: 3702:AT1G67100
uniprot id: A0A178WDZ5
uniprot id: Q9ZW96
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in roots and flowers.

3702:AT4G01630
gene id: 3702:AT4G01630
uniprot id: A0A178UWZ2
uniprot id: Q9ZSI1
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: By auxin.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity). Target of the transcriptional activator LBD18. Regulated by LBD18 to promote lateral root formation (PubMed:23872272).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Expressed during lateral root development.
messages: Membrane
messages: Plants silencing EXPA17 exhibit reduced number of emerged lateral roots. Plants over-expressing EXPA17 show increased density of emerged lateral roots.
messages: cell wall

3702:AT2G24520
gene id: 3702:AT2G24520
uniprot id: A0A1P8B2U9
uniprot id: A0A1P8B2V0
uniprot id: A0A1P8B2Y6
uniprot id: Q9SJB3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Binds to 14-3-3 proteins. The binding is induced by phosphorylation of Thr-948. Binding to 14-3-3 proteins activates the H(+)-ATPase (By similarity).
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity).

3702:AT3G07320
gene id: 3702:AT3G07320
uniprot id: A0A654F4Y2
uniprot id: Q9SRT4
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT1G58230
gene id: 3702:AT1G58230
uniprot id: F4I9T0
names: Disruption Phenotype
names: Function
messages: May be involved in the suppression of BCHC1 activity.
messages: No visible phenotype.

3702:AT5G25350
gene id: 3702:AT5G25350
uniprot id: Q708Y0
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of SCF(EBF1) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (probably including EIN3 and EIL1). Regulator of the ethylene signaling cascade by modulating the stability of EIN3 and EIL1 proteins.
messages: EIN3-dependent induction by ethylene.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex. Interacts with CUL1, SKP1A/ASK1, SKP1B/ASK2, EIN3, and EIL1.
messages: Ubiquitous.

3702:AT1G66852
gene id: 3702:AT1G66852
uniprot id: A0A178W9S5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G24590
gene id: 3702:AT5G24590
uniprot id: Q9LKG8
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Accumulates 2 days post infection with turnip crinkle virus (TCV) (PubMed:24418554).
messages: (Microbial infection) Compromised function in defense response pathway when interacting with the invading viral capsid protein (CP) of turnip crinkle virus (TCV) due to abnormal subcellular localization.
messages: (Microbial infection) Interacts via its C-terminal region with the N-terminal region of the turnip crinkle virus (TCV) capsid protein (CP); this interaction prevents its nuclear localization and inhibits its function in basal resistance response pathway.
messages: Endomembrane system
messages: Increased replication of turnip crinkle virus (TCV) and cucumber mosaic virus (CMV) (PubMed:18785827, PubMed:24418554). Normal HRT-mediated hypersensitive response (HR) and resistance to TCV (PubMed:18785827). Delayed flower development in antisense asTIP plants (PubMed:24418554).
messages: Induced by bacterial pathogens type III effector proteins (TTEs).
messages: Nucleus
messages: Phosphorylated at Thr-142. Phosphorylation at Thr-142 is required for nuclear import.
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator essential for the anti-viral defense called virus basal resistance response pathway (PubMed:11041886, PubMed:15629774, PubMed:18785827, PubMed:24418554). Not involved in HRT-mediated hypersensitive response (HR) and resistance to TCV (PubMed:18785827). Binds DNA non specifically (PubMed:15629774). Activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity).

3702:AT1G29110
gene id: 3702:AT1G29110
uniprot id: F4HZW2
names: Similarity
messages: Belongs to the peptidase C1 family.

3702:AT1G09795
gene id: 3702:AT1G09795
uniprot id: Q8GSJ1
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
messages: Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP).
messages: Feedback inhibited by L-histidine.
messages: chloroplast

3702:AT4G31160
gene id: 3702:AT4G31160
uniprot id: Q9M086
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the VPRBP/DCAF1 family.
messages: Component of the CUL4-RBX1-DDB1-DCAF1 E3 ubiquitin-protein ligase complex, DCAF1 may function as the substrate recognition module within this complex. Appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.
messages: Component of the CUL4-RBX1-DDB1-DCAF1 E3 ubiquitin-protein ligase complex. Interacts with DDB1A through its DWD motifs.
messages: Embryonic development is arrested at the globular stage.
messages: Nucleus
messages: The DWD boxes are required for interaction with DDB1A.
messages: Ubiquitous but predominantly expressed in the inflorescence and roots.

3702:AT3G54750
gene id: 3702:AT3G54750
uniprot id: A0A1I9LR33
uniprot id: F4JE17
uniprot id: Q8GXI8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DONSON family.
messages: Nucleus

3702:AT2G30942
gene id: 3702:AT2G30942
uniprot id: A0A178VR36
uniprot id: F4IPU5
names: Caution
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G20190
gene id: 3702:AT1G20190
uniprot id: A0A178WC12
uniprot id: A0A1P8APG3
uniprot id: Q9LNU3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Expressed in the leaf, but not in the epidermis or in the vascular bundles.
messages: Membrane
messages: cell wall

3702:AT1G63020
gene id: 3702:AT1G63020
uniprot id: Q9LQ02
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RNA polymerase beta' chain family.
messages: Blocked in the perpetuation of CNN, CG and CNG methylation in repeated endogenous DNA accompanied by a reduction in long 24-26 nt siRNAs. Transient loss of post-transcriptional gene silencing (PTGS) in young leaves. Reduction of heterochromatin association into chromocenters, coincident with losses in cytosine methylation at pericentromeric 5S gene clusters and AtSN1 retroelements. Altered cell-to-cell movement of siRNAs beyond the vasculature. Release of transposon silencing. Not impaired RNA-directed DNA methylation-dependent (RdDM) silencing. Defective in the maintenance of post-transcriptional RNA silencing.
messages: Component of the RNA polymerase IV complex. Interacts with NRPD2, NRPD3, NRPD3B, NRPD4, NRPD5, NRPD5B, NRPD6A, NRPD7, NRPD7B, NRPD9A, NRPD9B, NRPD10, NRPD11, NRPD12, RDR2, RDM4, CLSY1, CLSY2, CLSY3, CLSY4 and SHH1.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity). Largest and catalytic component of RNA polymerase IV which mediates 24-nt short-interfering RNAs (siRNA) accumulation. Implicated in siRNA-directed heterochromatin formation through the action of DCL3 and AGO4, and subsequent DNA methylation-dependent silencing of targeted sequences. Essential component of a self-reinforcing loop coupling de novo DNA methylation to siRNA production. Required for intercellular but not intracellular RNA interference (RNAi) leading to systemic post-transcriptional gene silencing. Involved in the maintenance of post-transcriptional RNA silencing.
messages: Mostly expressed in flowers, and, to a lower extent, in leaves.
messages: Nucleus

3702:AT3G19700
gene id: 3702:AT3G19700
uniprot id: Q9LJM4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed in the endosperm of fertilized ovules.
messages: Membrane
messages: Modulates the seed size by negatively regulating the cellularization of syncytial endosperm.

3702:AT5G53870
gene id: 3702:AT5G53870
uniprot id: A0A1P8BGZ7
uniprot id: Q9FN39
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the early nodulin-like (ENODL) family.
messages: Cell membrane
messages: May act as a carbohydrate transporter.
messages: Mostly expressed in stems, leaves and flowers, and, to a lower extent, in seedlings, roots and seeds.

3702:AT2G30310
gene id: 3702:AT2G30310
uniprot id: A0A654EXG1
uniprot id: O22927
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT1G26355
gene id: 3702:AT1G26355
uniprot id: A0A178WKE9
uniprot id: B3H4F1
names: Function
names: Similarity
names: Tissue Specificity
messages: Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
messages: Belongs to the SPIRAL1 family.
messages: Detected in pollen of mature flowers.

3702:AT5G41360
gene id: 3702:AT5G41360
uniprot id: A0A178UFA0
uniprot id: A0A1P8BCS7
uniprot id: Q9FUG4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent 3'-5' DNA helicase, component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The ATPase activity of XPB, but not its helicase activity, is required for DNA opening. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. The ATP-dependent helicase activity of XPB is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription.
messages: Belongs to the helicase family. RAD25/XPB subfamily.
messages: Component of the 7-subunit TFIIH core complex composed of XPB, XPD, TFB1/GTF2H1, GTF2H2/P44, TFB4/GTF2H3, TFB2/GTF2H4 and TFB5/GTF2H5, which is active in NER. The core complex associates with the 3-subunit CDK-activating kinase (CAK) module composed of CYCH1/cyclin H1, CDKD and MAT1/At4g30820 to form the 10-subunit holoenzyme (holo-TFIIH) active in transcription.
messages: Nucleus

3702:AT5G53770
gene id: 3702:AT5G53770
uniprot id: A0A178UKU1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G28360
gene id: 3702:AT4G28360
uniprot id: A0A654FTK2
uniprot id: Q8LDU0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA.

3702:AT4G04800
gene id: 3702:AT4G04800
uniprot id: Q9M0Z6
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. Involved in cold tolerance. Eliminates MetSO and reactive oxygen species that accumulate at the ER during cold acclimation. MSRB family specifically reduces the MetSO R-enantiomer (By similarity).
messages: Endoplasmic reticulum
messages: Increased methionine sulfoxide content after cold treatment. Increased sensitivity to oxidative stress induced by cold. Loss of cold acclimation.

3702:AT1G53970
gene id: 3702:AT1G53970
uniprot id: Q9SYF3
names: Similarity
messages: Belongs to the 'GDSL' lipolytic enzyme family.

3702:AT1G08200
gene id: 3702:AT1G08200
uniprot id: Q9SGE0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Catalyzes the conversion of UDP-D-glucuronate to a mixture of UDP-D-apiose and UDP-D-xylose. D-Apiose (3-C-hydroxymethyl-d-erythrose) is the only plant cell wall monosaccharide with a branched carbon skeleton and is found in rhamnogalacturonan II (RG-II), apiogalacturonan, and several apioglycosides (By similarity).
messages: Cytoplasm
messages: Homodimer.

3702:AT2G32610
gene id: 3702:AT2G32610
uniprot id: O80898
uniprot id: W8Q6Z4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like B subfamily.
messages: Expressed in young seedlings, primarily in the vascular tissue.
messages: Golgi apparatus membrane
messages: Membrane
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

3702:AT3G15030
gene id: 3702:AT3G15030
uniprot id: Q8LPR5
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in cotyledons during embryogenesis. Expressed during ovule development (PubMed:25378179).
messages: Expressed in cotyledons, particularly in the vascular region, in leaves, roots, buds, flowers and immature siliques.
messages: Interacts with AHL27 and AHL29 (PubMed:24218605). Interacts with SPL (PubMed:25527103, PubMed:25378179). Interacts with JGB (PubMed:27468890, PubMed:24218605, PubMed:25378179, PubMed:25527103). Interacts with GI (via N-terminus) (PubMed:28628608).
messages: Nucleus
messages: Repressed by the miRNA miR-JAW/miR319.
messages: Transcription factor playing a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164) (PubMed:12931144, PubMed:17307931). Required during early steps of embryogenesis (PubMed:15634699). Participates in ovule develpment (PubMed:25378179). Activates LOX2 expression by binding to the 5'-GGACCA-3' motif found in its promoter (PubMed:18816164, PubMed:12931144, PubMed:15634699, PubMed:17307931, PubMed:25378179). Activates YUC5 transcription by binding to the 5'-GTGGGCCA-3' motif found in its promoter (PubMed:27597774). Through the activation of YUC5 transcription, integrates the auxin response to a brassinosteroid-dependent molecular circuit that promotes cell elongation in hypocotyls (PubMed:27597774). Activates GIS transcription by binding to the 5'-TGGTCC-3' motif found in its promoter (PubMed:29165850). Involved in the regulation of trichome branching through the activation of GIS transcription (PubMed:29165850). Activates CO transcription by binding to the 5'-GGACCAC-3' motif found in its promoter (PubMed:28628608). Involved in the regulation of photoperiodic flowering through the activation of CO transcription (PubMed:28628608). Activates TCL1 and TCL2 transcription by binding to the 5'-TGGCCA-3' and 5'-GTGGACCA-3' motifS found in their respective promoters (PubMed:31575625). Involved in the suppression of trichome initiaition through the activation of TCL1 and TCL2 transcription (PubMed:31575625). Activates HAT2 transcription by binding to the 5'-TGGTCCAC-3' motif found in its promoter (PubMed:30742619). Through the activation of HAT2 transcription, involved in the auxin-independent reprogramming of mitotic cells to exit division and acquire differentiation competence within the transition zone (PubMed:30742619).

3702:AT3G07560
gene id: 3702:AT3G07560
uniprot id: A0A178VBD0
uniprot id: Q9SRR0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-13 family.
messages: Component of the PEX13-PEX14 docking complex, a translocon channel that specifically mediates the import of peroxisomal cargo proteins bound to PEX5 receptor (PubMed:16813573, PubMed:17478547, PubMed:19594707). The PEX13-PEX14 docking complex forms a large import pore which can be opened to a diameter of about 9 nm (By similarity). Mechanistically, PEX5 receptor along with cargo proteins associates with the PEX14 subunit of the PEX13-PEX14 docking complex in the cytosol, leading to the insertion of the receptor into the organelle membrane with the concomitant translocation of the cargo into the peroxisome matrix (By similarity). Essential for pollen-tube discharge that take place only in the presence of functional peroxisomes in either the male or the female gametophyte (PubMed:18160292).
messages: Highly expressed in pollen. Detected in shoots, roots, stems, leaves, inflorescences and emasculated postils. Strongly expressed in both male and female gametophytes during fertilization.
messages: Interacts with PEX14; forming the PEX13-PEX14 docking complex (By similarity). Interacts (via N-terminus) with PEX7, but not with PEX5 (PubMed:16813573). Interacts with APEM9 (via N-terminus) (PubMed:24510720).
messages: Lethal, when homozygous.
messages: Peroxisome membrane

3702:AT3G21380
gene id: 3702:AT3G21380
uniprot id: Q9LIF8
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT5G03840
gene id: 3702:AT5G03840
uniprot id: A0A384L909
uniprot id: P93003
uniprot id: Q547P7
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phosphatidylethanolamine-binding protein family.
messages: Controls inflorescence meristem identity and is required for maintenance of an indeterminate inflorescence. Prevents the expression of 'APETALA1' and 'LEAFY'. Also plays a role in the regulation of the time of flowering in the long-day flowering pathway. May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity).
messages: Cytoplasm
messages: Expressed below the apical dome of inflorescence and coflorescence meristems, and in inflorescence stem.
messages: Mutagenesis of His-88 to Tyr converts the repressor of flowering 'TERMINAL FLOWER 1' into a 'FLOWERING LOCUS T'-like activator of flowering.
messages: Weakly expressed in vegetative phase from day 2 or day 3. Increased expression after commitment to flowering from day 7 on.

3702:AT1G03850
gene id: 3702:AT1G03850
uniprot id: A0A178W2Q3
uniprot id: Q84TF4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G18640
gene id: 3702:AT1G18640
uniprot id: A0A178W417
uniprot id: O82796
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HAD-like hydrolase superfamily. SerB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the last step in the plastidial phosphorylated pathway of serine biosynthesis (PPSB). The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates. Required for embryo, pollen and root development. May be required preferentially for serine biosynthesis in non-photosynthetic tissues.
messages: Embryo lethal when homozygous.
messages: Ubiquitous. Mainly expressed in shoot and root meristems, vasculature, pollen, anthers, carpels and seeds.
messages: Up-regulated in aerial parts by 8 hours exposure to darkness, whereas longer exposure down-regulate expression in both roots and aerial parts.
messages: chloroplast

3702:AT1G09160
gene id: 3702:AT1G09160
uniprot id: O80492
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT1G48360
gene id: 3702:AT1G48360
uniprot id: A0A1P8AVS5
uniprot id: A0A1P8AVS9
uniprot id: A0A1P8AVV1
uniprot id: Q5XVJ4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAN1 family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Nuclease required for the repair of DNA interstrand cross-links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions.
messages: Nuclease required for the repair of DNA interstrand cross-links (ICLs) (PubMed:25779053). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions (By similarity). May act upstream of the helicase RECQL4A and the ATPase RAD5A, which is involved in error-free post-replicative repair. Functions independently of MUS81 pathway, but in a similar pathway with RECQ4A, RAD5A and MFH1 in ICL repair (PubMed:25779053).
messages: Nucleus

3702:AT1G28520
gene id: 3702:AT1G28520
uniprot id: Q9SGQ0
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By far-red light.
messages: Cytoplasm
messages: Homodimer (By similarity). Interacts with phytochrome B (phyB).
messages: No visible phenotype. Voz1 and voz2 double mutant displays a late flowering phenotype under long-day conditions.
messages: Nucleus
messages: The VOZ region includes a DNA-binding domain and a dimerization domain. Contains an atypical zinc-finger followed by a basic region structurally related to the NAC domain.
messages: Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner.
messages: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem.

3702:AT3G49670
gene id: 3702:AT3G49670
uniprot id: A0A5S9XJG4
uniprot id: Q9M2Z1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in a ring surrounding the center of meristems extended in the cortex of developing stems and older pedicels. Present in all developing floral organs, especially in anthers and gynoecium (mainly in ovules). Observed in anthers at stage 2 in the archesporial cells. At stage 3, localized in the primary sporogenous and primary parietal cells. Subsequently preferentially expressed in the sporogenous cells at anther stage 4. Later restricted to the tapetum and pollen mother cells (PMCs) before disappearing progressively.
messages: Expressed in seedlings, roots, rosette leaves, stems, inflorescences, flowers and siliques.
messages: Interacts with BAM1 and CLV1. Binds to the CLV3, CLE11, CLE18, CLE19, CLE22, CLE25, CLE26, CLE40, CLE41 and CLE42 mature peptides, probably via its extracellular leucine-rich repeat region.
messages: Membrane
messages: Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance.
messages: Rescues partially CLV3 disruption. When associated with BAM1 disruption, abnormal anthers at a very early stage and later lack of endothecium, middle and tapetum layers. Loss of stem cells at the shoot and flower meristems.

3702:AT2G07751
gene id: 3702:AT2G07751
uniprot id: A0A654GFN9
uniprot id: Q3EC47
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 3 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Mitochondrion membrane

3702:AT4G23060
gene id: 3702:AT4G23060
uniprot id: A0A654FRX6
uniprot id: Q2NNE0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus

3702:AT3G56850
gene id: 3702:AT3G56850
uniprot id: A0A178VIK4
uniprot id: Q9LES3
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family. ABI5 subfamily.
messages: Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
messages: DNA-binding heterodimer with ABI5/DPBF1, DPBF2 or EEL/DPBF4. Interacts with the AFP proteins AFP1, AFP2, AFP3 and AFP4.
messages: Expressed in embryo during the latest stages of seed maturation.
messages: Nucleus
messages: Predominantly expressed in seeds.

3702:AT5G08680
gene id: 3702:AT5G08680
uniprot id: Q9C5A9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c (By similarity).
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT3G01570
gene id: 3702:AT3G01570
uniprot id: A0A178VDK3
uniprot id: Q9SS98
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oleosin family.
messages: Lipid droplet
messages: May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth (By similarity).
messages: Membrane

3702:AT5G37300
gene id: 3702:AT5G37300
uniprot id: A0A1P8BF05
uniprot id: A0A1P8BF11
uniprot id: A0A654G5U4
uniprot id: Q93ZR6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (PubMed:18621978). Involved in cuticular wax biosynthesis (PubMed:18621978, PubMed:30729606). Required to reduce leaf water loss, especially during drought (PubMed:30729606).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Expressed in flowers, siliques, top parts of stems, and leaves (PubMed:18621978, PubMed:30729606). Not found in roots, seeds and young seedlings (PubMed:18621978).
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Membrane
messages: Severe reduction in wax alkyl esters (PubMed:18621978). Reduced wax ester coverage on leaves and stems during normal and drought conditions leading to compromised growth and relative water content due to an increased leaf water loss, especially during drought (PubMed:30729606).
messages: Up-regulated in the stem epidermis during active wax synthesis (PubMed:16299169). Induced in roots during drought and salt stresses, and upon abscisic acid (ABA) treatment (PubMed:30729606).

3702:AT4G18640
gene id: 3702:AT4G18640
uniprot id: C0LGQ4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Endomembrane system
messages: Expressed in pollen tubes and seedlings.
messages: Involved in the pollen tube perception of the female signal by binding an unidentified female attractant (PubMed:26863186). May be involved in the regulation of root hairs development (PubMed:16367956).
messages: Short straight root hairs.

3702:AT2G22125
gene id: 3702:AT2G22125
uniprot id: F4IIM1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Altered microtubule-dependent dynamics of cellulase synthase (CESA) complexes (CSCs) (PubMed:22190487, PubMed:21150290, PubMed:20616083, PubMed:22294619, PubMed:22751327, PubMed:23623553, PubMed:24368796). Reduced cellulose content, with abnormal organization of cellulose microfibrils (PubMed:20616083, PubMed:23623553). Anisotropic growth defect; abnormal cell expansion, such as reduced cell elongation but increased cell volume, leading to radially swollen epidermal cells in both primary root and dark-grown hypocotyls, as well as dwarfism (PubMed:7743935, PubMed:21150290, PubMed:20616083, PubMed:22294619, PubMed:22190487, PubMed:22427339, PubMed:24368796). Organ and cell twisting leading to alterated phyllotaxis, such as subtle right-handed torsion of the inflorescence stems and hypocotyls, and associated with altered microtubule organization and uncoupled cellulose deposition from cortical microtubules (PubMed:22294619, PubMed:23623553). Reduced fertility due to smaller gynoecia with fewer ovules, heterostyly, the inability of anthers to release pollen, and pollen defects displaying irregular or collapsed cell wall morphologies as well as altered pollen tube development (PubMed:22427339, PubMed:21150290, PubMed:20616083, PubMed:22294619). Defective anther dehiscence. Decreased number of ovules per gynoecium. Hypersensitive to the microtubule-disrupting drug oryzalin. Altered depolymerization of cortical microtubules in response to dehydration. Enhanced sensitivity to exogenous calcium leading to root growth inhibition (PubMed:22427339). The csi1 csi3 double mutants shows an enhanced cell expansion defect compared to csi1 as well as an additive reduction of cellulase synthase (CESA) complexes (CSCs) velocities (PubMed:24368796).
messages: Associates with cellulase synthase (CESA) complexes (PubMed:20616083, PubMed:22751327). Interacts with CESA1, CESA3 and CESA6 (PubMed:20616083, PubMed:24368796). Binds to cortical microtubules (PubMed:22190487, PubMed:22427339, PubMed:22751327).
messages: Cell membrane
messages: Endomembrane system
messages: Expressed in seedlings, roots, stems, leaves, flowers and pollen (PubMed:20616083, PubMed:22427339). Highly expressed in floral tissues (PubMed:22427339).
messages: Golgi apparatus
messages: Regulator of the microtubular cytoskeleton (PubMed:22427339). Microtubule-associated protein essential for the functional association of cellulase synthase (CESA) complexes (CSCs) and cortical microtubules (PubMed:22294619, PubMed:22190487, PubMed:22751327, PubMed:23623553, PubMed:24368796). Promotes dynamics of CSCs in the plasma membrane (PubMed:21150290, PubMed:20616083, PubMed:22294619, PubMed:22190487, PubMed:22751327, PubMed:23623553, PubMed:24368796). Regulates primary cell wall biosynthesis and cellulose microfibrils organization (PubMed:21150290, PubMed:20616083, PubMed:23623553). Required for the regulation of root cell elongation/expansion (PubMed:7743935, PubMed:21150290, PubMed:20616083, PubMed:22294619, PubMed:22427339). Necessary for the formation of ovules, pollen cell wall morphogenesis and pollen tube development (PubMed:22294619). Involved in anther dehiscence, via dehydration-induced microtubule depolymerization and reorganization. May play a role in early gynoecial development (PubMed:22427339).
messages: Strongly expressed in the stigma and pollen grains. Present at lower levels in sepals, filaments, and anther wall. Absent from the ovary.
messages: Target of the cellulase synthase (CESA) complexes (CSCs) trafficking inhibitor CESTRIN, which reduces cellulose content and alters anisotropic growth of hypocotyls; CESTRIN treatment inhibits the dynamics of CSCs.
messages: cytoskeleton

3702:AT4G04460
gene id: 3702:AT4G04460
uniprot id: A0A654FLW7
uniprot id: F4JGD2
uniprot id: Q9XEC4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase A1 family.
messages: Expressed in petals, carpels and seed pods.
messages: Involved in the processing and degradation of storage proteins.
messages: Secreted

3702:AT2G31980
gene id: 3702:AT2G31980
uniprot id: Q8L5T9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cystatin family. Phytocystatin subfamily.
messages: Secreted
messages: Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity).

3702:AT1G67320
gene id: 3702:AT1G67320
uniprot id: F4HRU7
uniprot id: F4HRU9
uniprot id: Q84WJ2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic-type primase large subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication.
messages: Heterodimer of a small subunit and a large subunit.

3702:AT3G59420
gene id: 3702:AT3G59420
uniprot id: A0A654FJ74
uniprot id: Q9LX29
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated and phosphorylated by ALE2.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By CLE40 in root quiescent center (QC).
messages: Cell membrane
messages: Controls formative cell division in meristems, including root tips and lateral root initiation zones of the pericycle, in response to CLE40 signal. Acts with CLE40p peptide as a ligand-receptor pair in a signal transduction pathway, coordinating movement of the root tip and organization of cell divisions in the root meristem. Required during embryogenesis and development, probably for the differentiation of protoderm and epidermal cells. Involved in the regulation of cellular organization during the development of sepal margins and ovule integument outgrowth and promotes giant cell formation (PubMed:25315606). Can phosphorylate ALE2.
messages: Expressed in seedlings, floral buds, siliques, leaves, shoot apical meristems (SAM), and, to a lower extent, in roots.
messages: First observed in all young embryo cells. At the globular stage, restricted to apical region. Later confined to the protoderm area leading to cotyledon primordia and the root apex. In mature embryos, mostly localized in the L1 layer of the SAM, apical regions of cotyledons and the root apex, and, to a lower extent, in protoderm of other regions. In seedlings, expressed in developing tissues of the shoot, including the SAM and epidermis of organs primordia, especially in L1 layer cells. In roots, localized in quiescent center (QC) central cells, columella initials and cells below the QC, the lateral root cap (LRC) and the initial cells destined to give rise to the root epidermal cell file and the LRC. Expressed in epidermal emerged from under the LRC, with levels vanishing in elongation zone. Specifically detected in the small daughter cells after the first asymmetric pericycle cell division during lateral roots emergence. Subsequently, the expression expands to the adjacent small daughter cells from the second asymmetric cell division, resulting in a central core-specific expression pattern.
messages: Homodimer (Probable). Interacts with PP2A3 (PubMed:26792519).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Reduced fertility due to abnormal embryogenesis and integument formation. Abnormal seed coat and leaves epidermis, with transient fusion between adjacent developing leaves and reduced hydrophobicity of leaf surfaces. Decreased numbers of giant cells in sepal epidermis of acr4-24 (PubMed:25315606).
messages: multivesicular body membrane

3702:AT4G23740
gene id: 3702:AT4G23740
uniprot id: Q9SUQ3
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT5G44130
gene id: 3702:AT5G44130
uniprot id: A0A178U8W9
uniprot id: Q9FFH6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT2G01430
gene id: 3702:AT2G01430
uniprot id: A0A1P8B175
uniprot id: Q8S9N6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: Nucleus
messages: Probable transcription factor.

3702:AT2G21880
gene id: 3702:AT2G21880
uniprot id: Q9SJ11
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT1G66980
gene id: 3702:AT1G66980
uniprot id: D7SFH9
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Atypical receptor-like kinase involved in disease resistance.
messages: Cell membrane
messages: Expressed in shoots, rosette and cauline leaves, stems, flowers and siliques.
messages: Gain-of-function mutant plants snc4-1D show a dwarf phenotype, express constitutively the defense marker genes PR1, PR2, and PDF1.2, and display enhanced resistance to Hyaloperonospora arabidopsidis isolate NOCO2.
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: No visible phenotype under normal growth conditions.
messages: The two glycerophosphodiester phosphodiesterase domains are predicted to be extracellular and the kinase domain cytoplasmic.

3702:AT3G20130
gene id: 3702:AT3G20130
uniprot id: A0A178VM93
uniprot id: A8MQL2
uniprot id: Q9LJY5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit loss of tropic response to gravity when reoriented relative to the gravity vector in the cold.
messages: Plays a role in the gravitropic response of the inflorescence stems and roots. May affect the synthesis of flavonols that have a role in regulating auxin transport.

3702:AT4G13290
gene id: 3702:AT4G13290
uniprot id: A0A654FNT0
uniprot id: Q9T0K0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT4G25150
gene id: 3702:AT4G25150
uniprot id: Q9SW12
names: Function
names: Similarity
messages: Belongs to the APS1/VSP family.
messages: May function as somatic storage protein during early seedling development.

3702:AT2G47920
gene id: 3702:AT2G47920
uniprot id: O82259
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NET family.
messages: Cell membrane
messages: Cytoplasm
messages: Dimer or oligomer. Interacts with PVA11/VAP27.
messages: Endoplasmic reticulum membrane
messages: Plant-specific actin binding protein. Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane.
messages: The C-terminus is involved in oligomerization and is essential for membrane association. The NAB domain, also called NAB (NET actin-binding) domain, is involved in F-actin binding.

3702:AT3G51840
gene id: 3702:AT3G51840
uniprot id: A0A654FFV7
uniprot id: Q96329
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the acyl-CoA dehydrogenase family.
messages: Catalyzes the desaturation of short-chain acyl-CoAs to 2-trans-enoyl-CoAs (PubMed:10212254, PubMed:15743450). Active on butyryl-CoA (C4), hexanoyl-CoA (C6), and octanoyl-CoA (C8) (PubMed:10212254). Has no activity as acyl-CoA dehydrogenase or on crotonyl-CoA (an unsaturated C4:1 carbocyclic ester) or glutaryl-CoA (a dicarboxylic ester) (PubMed:10212254). Peroxisomal fatty acid beta-oxidation is essential for embryo development (PubMed:12682048). Acts as a suppressor of transcriptional silencing (PubMed:31064880). Required for nuclear histone acetylation and DNA demethylation at some endogenous genomic loci (PubMed:31064880).
messages: Glyoxysome
messages: Homotetramer.
messages: Induced by dehydration and abscisic acid (ABA).
messages: Induced by seed imbibition with a peak at day 5 to 7. Decreases after illumination but still detectable 5 days after illumination (PubMed:10212254).
messages: Particularly abundant in etiolated cotyledons. Also present in flowers, roots and siliques, but not detected in green cotyledons, rosette leaves and stems.
messages: Peroxisome

3702:AT5G10630
gene id: 3702:AT5G10630
uniprot id: A0A1P8BFE6
uniprot id: A0A1P8BFF4
uniprot id: B9DFA5
uniprot id: F4KI84
names: Function
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

3702:AT1G48660
gene id: 3702:AT1G48660
uniprot id: A0A1P8AV88
uniprot id: Q9C735
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.

3702:AT4G27980
gene id: 3702:AT4G27980
uniprot id: A0A178V295
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G39670
gene id: 3702:AT5G39670
uniprot id: A0A178UPR1
uniprot id: Q93Z27
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G68765
gene id: 3702:AT1G68765
uniprot id: A0A178WMB5
uniprot id: Q8LAD7
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: An extended PIP motif (50-69) is sufficient for abscission induction.
messages: By wounding.
messages: Expressed only during floral abscission.
messages: Expressed specifically in the floral abscission zone.
messages: Floral organs remain attached to the plant body after the shedding of mature seeds despite a normal floral abscission zone development, including abnormal petal breakstrength (pBS) (PubMed:12972671, PubMed:23963677). Delayed cell-wall loosening during shedding associated with less pronounced and delayed abscission zone (AZ) cells rounding (PubMed:23963677).
messages: IDA is processed in vitro by the same proteolytic activity releasing the CLE peptide from CLV3.
messages: IDL1 is capable of replacing the activity of IDA while IDL2, IDL3, IDL4 and IDL5 are only partially redundant.
messages: Interaction with RLK5.
messages: Involved in an ethylene-independent separation step of floral abscission (PubMed:18660431, PubMed:23963677, PubMed:27058169). Promotes abscission zone (AZ) cells rounding (PubMed:23963677, PubMed:27058169). May act with RLK5 and HSL2 as ligand-receptor pairs (PubMed:18660431).
messages: extracellular space

3702:AT2G36840
gene id: 3702:AT2G36840
uniprot id: A0A5S9X4L4
uniprot id: Q9SJM1
names: Function
messages: Binds amino acids.
messages: May bind amino acids.

3702:AT2G22410
gene id: 3702:AT2G22410
uniprot id: Q9SJZ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT5G06210
gene id: 3702:AT5G06210
uniprot id: Q9FFZ6
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in rosette leaves, cauline leaves, stems and flowers.
messages: Induced by methyl viologen.
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit increased sensitivity to salt stress.
messages: Probable RNA-binding protein that may be involved in salt and oxidative stress tolerance.
messages: chloroplast

3702:AT5G51451
gene id: 3702:AT5G51451
uniprot id: B3H5J1
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Golven' means irregular waves in Dutch.
messages: Belongs to the RGF family.
messages: Binds to LRR receptor-like serine/threonine-protein kinases RGI1, RGI2 and RGI3 to trigger their dimerization with SERK proteins and subsequent signaling.
messages: Endoplasmic reticulum
messages: Expressed in roots, shoots, leaves and flowers.
messages: In roots, expressed only in the quiescent center (QC) and the columella stem cells (CC) initials (PubMed:23370719). Slightly observed in additional underlying CCs and in the vascular initials above the QC (PubMed:23370719). Induced early during lateral root formation (PubMed:23370719).
messages: Secreted
messages: Signaling peptide (root growth factor) that maintains the postembryonic root stem cell niche (PubMed:20798316). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (PubMed:22307643, PubMed:23370719).

3702:AT1G44170
gene id: 3702:AT1G44170
uniprot id: A0A178W2A3
uniprot id: Q70DU8
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the aldehyde dehydrogenase family.
messages: By abscisic acid (ABA), dehydration and salt stress in roots. Isoform alpha is up-regulated in leaves but not in roots upon salt treatment. Isoforn beta is up-regulated by salt treatment in both roots and leaves.
messages: Homodimer and homomultimer.
messages: Increased sensitivity to salt stress.
messages: Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation. Medium- to long-chain saturated aldehydes are preferred substrates, while the short-chain aldehyde propanal is a weak substrate. Is strictely NAD(+) specific.
messages: Isoform alpha is expressed in expanded leaves and flowers. Detected in seedlings. Isoform beta is mainly expressed in flowers. Detected in leaves and seedlings.
messages: Major isoform.
messages: Produced by alternative splicing. Maybe not translated into a protein or accumulates at a level below detection.
messages: Thiol-based regulation. Inactivation after dimerization under oxidizing conditions.

3702:AT5G37640
gene id: 3702:AT5G37640
uniprot id: Q9FHQ6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either eL40 or eS31) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT1G07520
gene id: 3702:AT1G07520
uniprot id: A0A178W5Z6
uniprot id: A0A1P8AT66
uniprot id: A0A384L9U8
uniprot id: Q3EDH0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in seedlings, roots, cotyledons, leaves and sepals.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT1G79830
gene id: 3702:AT1G79830
uniprot id: A0A178WIG2
uniprot id: Q0WVL7
names: Caution
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Golgi apparatus
messages: Golgi matrix protein playing a role in tethering of vesicles to Golgi membranes and in maintaining the overall structure of the Golgi apparatus.
messages: Interacts with RABH1B and RABH1C, but not with RABD1 or RABD2A.
messages: The C-terminal domain (817-956) is necessary and sufficient for Golgi and cytoplasm targeting.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35615
gene id: 3702:AT2G35615
uniprot id: A0A178VN30
uniprot id: Q3EBM5
names: Caution
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A1 family.
messages: No visible phenotype.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G16330
gene id: 3702:AT1G16330
uniprot id: A0A178W969
uniprot id: Q9SA32
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.

3702:AT1G60450
gene id: 3702:AT1G60450
uniprot id: A0A654ELD3
uniprot id: Q4PSY4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Belongs to the glycosyltransferase 8 family. Galactosyltransferase subfamily.
messages: Cytoplasm
messages: Galactinol synthase involved in the biosynthesis of raffinose family oligosaccharides (RFOs) that function as osmoprotectants. May promote plant stress tolerance (By similarity).

3702:AT4G18920
gene id: 3702:AT4G18920
uniprot id: A0A178V434
uniprot id: Q1PE68
names: Similarity
messages: Belongs to the OBAP family.

3702:AT4G01026
gene id: 3702:AT4G01026
uniprot id: A0A178UTD1
uniprot id: Q1ECF1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Homodimer. Binds ABA on one subunit only. Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Interacts with ABI1, and possibly with other PP2Cs (PubMed:19874541).
messages: Membrane
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA.
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT4G13050
gene id: 3702:AT4G13050
uniprot id: A0A5S9XRS5
uniprot id: Q9SV64
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acyl-ACP thioesterase family.
messages: Plays an essential role in chain termination during de novo fatty acid synthesis.
messages: Plays an essential role in chain termination during de novo fatty acid synthesis. Possesses high thioesterase activity for oleoyl-ACP versus other acyl-ACPs.
messages: chloroplast

3702:AT3G43980
gene id: 3702:AT3G43980
uniprot id: A0A178VAH5
uniprot id: Q680P8
names: Cofactor
names: Similarity
messages: Belongs to the universal ribosomal protein uS14 family.
messages: Binds 1 zinc ion per subunit.

3702:AT3G51550
gene id: 3702:AT3G51550
uniprot id: Q9SCZ4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Sirene' means siren in French.
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By brassinosteroids (BR).
messages: Cell membrane
messages: Detected in floral apices, young ovule primordia, and young anthers with immature pollen, but not in older anthers with mature pollen. After fertilization, expressed in globular embryos.
messages: Embryonic lethality due to impaired fertilization. The pollen tube fails to arrest and continues to grow inside the female gametophyte. Disturbed MLO7 relocalization to the filiform apparatus upon pollen tube arrival at the micropyle. Severe cell elongation defect in RNAi mutants with decreased FER expression. In fer-2 seedlings, altered responsiveness to brassinosteroids but increased ethylene response during the regulation of hypocotyl elongation. Increased resistance to powdery mildew (e.g. Golovinomyces orontii). Abscisic acid- (ABA)- hypersensitive response. Longer roots. Insensitivity to RALF1-mediated root-growth inbibition but hypersensitive to cation lithium inhibition.
messages: Expressed in leaves, buds, flowers, siliques, young ovules primordia, and young anthers with immature pollen, but not detected in mature pollen. Highest expression in the synergid cells of the female gametophyte.
messages: Female paralog of ANXUR, a male factor expressed in pollen tube that controls release of the sperm cell.
messages: Interacts with ROPGEF1 (PubMed:20876100). Interacts with RALF1; triggering phosphorylation status and subsequent activation (PubMed:24458638). Interacts with LRE and LLG1 (PubMed:26052747). Interacts, via its extracellular domain, with FERONIA at the synergid cell surface (PubMed:27524487).
messages: Named after the Etruscan goddess of fertility Feronia.
messages: Phosphorylated at Ser-858, Ser-871 and Ser-874 upon activation by RALF1.
messages: Receptor-like protein kinase that mediates the female control of male gamete delivery during fertilization, including growth cessation of compatible pollen tubes ensuring a reproductive isolation barriers, by regulating MLO7 subcellular polarization upon pollen tube perception in the female gametophyte synergids. Required for cell elongation during vegetative growth, mostly in a brassinosteroids- (BR-) independent manner. Acts as an upstream regulator for the Rac/Rop-signaling pathway that controls ROS-mediated root hair development. Seems to regulate a cross-talk between brassinosteroids and ethylene signaling pathways during hypocotyl elongation. Negative regulator of brassinosteroid response in light-grown hypocotyls, but required for brassinosteroid response in etiolated seedlings. Mediates sensitivity to powdery mildew (e.g. Golovinomyces orontii). Positive regulator of auxin-promoted growth that represses the abscisic acid (ABA) signaling via the activation of ABI2 phosphatase. Required for RALF1-mediated extracellular alkalinization in a signaling pathway preventing cell expansion.
messages: Sequencing errors.

3702:AT5G62690
gene id: 3702:AT5G62690
uniprot id: A0A178UP81
uniprot id: Q56YW9
uniprot id: Q9ASR0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: There are nine genes coding for beta-tubulin. The sequences coded by genes 2 and 3 are identical.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: cytoskeleton

3702:AT2G27960
gene id: 3702:AT2G27960
uniprot id: A0A178VPG9
uniprot id: O23249
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Associates with cyclin-dependent kinases (CDKs) and plays an essential role in the regulation of the cell cycle that affects plant growth rate. May inhibit both the G1/S and G2/M phases.
messages: Belongs to the CKS family.
messages: Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
messages: Interacts with CDKA-1 (PubMed:10100639, PubMed:11319029, PubMed:9276444, PubMed:20706207). Interacts with CDKB1-1, CDKB1-2 and CDKB2-1 (PubMed:11319029, PubMed:9276444, PubMed:11432958). Interacts with CYCD2-1 and At4g14310 (PubMed:20706207).
messages: Plants overexpressing CKS1 show reduced leaf size and root growth rates resulting from an increase of the cell-cycle duration with an equal extension of both G1 and G2 phases and a shortening of the meristem.

3702:AT4G13590
gene id: 3702:AT4G13590
uniprot id: A0A178V1F4
uniprot id: F4JT38
uniprot id: Q9T0H9
names: Caution
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GDT1 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Probable chloroplast-localized Mn(2+)/H(+) and/or Ca(2+)/H(+) antiporter regulating Ca(2+), Mn(2+) and pH homeostasis.
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast membrane

3702:AT5G01940
gene id: 3702:AT5G01940
uniprot id: A0A178UNV7
uniprot id: A0A1P8BFD8
uniprot id: A0A384L4R3
names: Caution
names: Similarity
messages: Belongs to the eIF-2-beta/eIF-5 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G65730
gene id: 3702:AT1G65730
uniprot id: A0A178W6V2
uniprot id: Q9SHY2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YSL (TC 2.A.67.2) family.
messages: May be involved in the transport of nicotianamine-chelated metals.
messages: Membrane

3702:AT1G22690
gene id: 3702:AT1G22690
uniprot id: A0A178WAA4
uniprot id: Q8GWK5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GASA family.
messages: Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.
messages: Secreted
messages: Six disulfide bonds may be present.

3702:AT4G34970
gene id: 3702:AT4G34970
uniprot id: A0A178V0D2
uniprot id: O49606
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the actin-binding proteins ADF family.
messages: By auxin, gibberellin, abscisic acid (ABA) and kinetin in roots.
messages: Developmental defects, reduced plant size, early flowering and decreased number of inflorescence secondary branches.
messages: Does not display typical F-actin depolymerizing activity. Exhibits a high ability to stabilize and cross-link actin filaments. Functions as an actin bundling protein with the highest efficiency under acidic conditions (PubMed:21570971). May play a role in the modulation of levels of histone H3 lysine 4 trimethylation and H3 lysine 9 and 14 acetylation at the FLC locus (PubMed:18830798).
messages: cytoskeleton

3702:AT1G68010
gene id: 3702:AT1G68010
uniprot id: A0A178WM81
uniprot id: A0A1P8ANC0
uniprot id: Q9C9W5
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Catalyzes the NADH-dependent reduction of hydroxypyruvate into glycerate in the photorespiratory core cycle. Mediates fatty acid beta-oxidation in germinating seeds when malate dehydrogenase is absent.
messages: Induced by drought. Accumulates in response to light, but transiently repressed in darkness.
messages: Peroxisome
messages: Present in leaves (at protein level). Mostly expressed in photosynthetic tissues such as leaves, stems, flowers, buds, and, to a lower extent, in siliques and roots.
messages: Slightly inhibited by oxalate.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Very low NADH-dependent hydroxypyruvate reductase activity in leaves. Under short days, slower growth and delayed bolting. Slight accumulation of metabolites with long turnover half-times that become dissimilated during the dark. Perturbated photorespiration-related gas exchange. When associated with HPR2 disruption, strong air-sensitivity and dramatic reduction in photosynthetic performance.

3702:AT2G22800
gene id: 3702:AT2G22800
uniprot id: A0A178VZE8
uniprot id: P46603
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: Nucleus
messages: Probable transcription factor.

3702:AT4G10290
gene id: 3702:AT4G10290
uniprot id: A0A178V4W9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G14620
gene id: 3702:AT2G14620
uniprot id: A0A1P8B1J8
uniprot id: A0A1P8B1L1
uniprot id: Q9ZVK1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT3G05390
gene id: 3702:AT3G05390
uniprot id: A0A7G2EME4
uniprot id: Q9MA52
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Membrane

3702:AT5G65460
gene id: 3702:AT5G65460
uniprot id: A0A1P8BDN5
uniprot id: A0A1P8BDP2
uniprot id: A0A1P8BDP7
uniprot id: A0A1P8BDQ0
uniprot id: A0A1P8BDS9
uniprot id: A0A654GET4
uniprot id: Q9FKP4
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: Cell membrane
messages: Expressed in roots, leaves, stems and flowers.
messages: Homodimer and heterodimer with KCA1 (PubMed:15247388). Interacts with CDKA-1 (PubMed:15247388). Interacts with At4g14310 (PubMed:20706207).
messages: Impaired chloroplast accumulation and slow avoidance movement under strong blue light (PubMed:20418504). Double mutant kac1kac2 exhibits an increase in leaf transmittance and a partial defect in nuclear avoidance response under strong blue light exposure (PubMed:27310016).
messages: Kinesin-like protein required for chloroplast movements and anchor to the plasma membrane. Mediates chloroplast movement via chloroplast actin (cp-actin) filaments. Required for the chloroplast avoidance response under high intensity blue light. Mediates redundantly with CHUP1 the nuclear avoidance response under high intensity blue light (PubMed:27310016). May be involved in division plane determination (Probable).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT1G78050
gene id: 3702:AT1G78050
uniprot id: A0A178WMJ7
uniprot id: F4I8M8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.
messages: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
messages: Highly but transiently induced by nitrite and nitrate.
messages: chloroplast

3702:AT2G46970
gene id: 3702:AT2G46970
uniprot id: A0A178VNL3
uniprot id: A0A1P8AXC9
uniprot id: A0A1P8AXH8
uniprot id: Q8L5W8
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed with a circadian rhythm showing peaks during the light period. Up-regulated by simulated shade in light-grown plants, in a phytochrome-dependent manner; low red/far-red ratio (R/FR) light, but repressed by a high R/FR light. Rapidly down-regulated after seedling deetiolation.
messages: Homodimer (By similarity). Interacts with APRR1/TOC1 (PubMed:11828023, PubMed:12826627). Associates to PTAC12/HMR/PAP5 which acts as a transcriptional coactivator (PubMed:25944101).
messages: Mainly expressed in stems, fruits and flowers and, to a lower extent, in leaves, seedlings and roots (PubMed:23708772). Accumulates in etiolated seedlings (PubMed:12826627).
messages: Nucleus
messages: Transcription factor. Involved in responses to transient and long-term shade. Required for the light-mediated inhibition of hypocotyl elongation. Necessary for rapid light-induced expression of the photomorphogenesis- and circadian-related gene APRR9. Seems to play a role in multiple PHYB responses, such as flowering transition and petiole elongation.

3702:AT2G14530
gene id: 3702:AT2G14530
uniprot id: Q9ZQR5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT2G41110
gene id: 3702:AT2G41110
uniprot id: P0DH97
uniprot id: P0DH98
uniprot id: Q682T9
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the calmodulin family.
messages: By rain-, wind-, and touch (thigmomorphogenesis).
messages: Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
messages: Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Activates MPK8 in vitro.
messages: Cytoplasm
messages: Interacts with IQM1 (via IQ domain).
messages: Interacts with KCBP and CIP111 (PubMed:10531384, PubMed:11346951). Binds to IQD1 and IQD20 (PubMed:23204523).
messages: Interacts with MPK8 (PubMed:21419340). Binds to ABCG36 (PubMed:26315018).
messages: This protein has four functional calcium-binding sites.
messages: cytoskeleton

3702:AT4G27840
gene id: 3702:AT4G27840
uniprot id: Q9STP2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the synaptobrevin family.
messages: Membrane
messages: Non-SNARE longin protein involved in membrane-trafficking machinery.

3702:AT2G27710
gene id: 3702:AT2G27710
uniprot id: B9DGN3
uniprot id: F4IGR3
uniprot id: Q9SLF7
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein P1/P2 family.
messages: P1 and P2 exist as dimers at the large ribosomal subunit.
messages: Phosphorylated.
messages: Plays an important role in the elongation step of protein synthesis.

3702:AT4G17380
gene id: 3702:AT4G17380
uniprot id: F4JP48
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DNA mismatch repair MutS family.
messages: Involved in meiotic recombination in association with MSH5. Required for reciprocal recombination and proper segregation of homologous chromosomes at meiosis. Promotes homologous recombination through facilitating chiasma formation during prophase I. Involved in the control of class I crossovers formation.
messages: Normal vegetative growth but severe reduction in fertility due to a decrease in chiasma frequency at metaphase I of meiosis.
messages: Nucleus
messages: Specifically expressed in flowers.

3702:AT4G31985
gene id: 3702:AT4G31985
uniprot id: A0A384L7C7
uniprot id: P51424
uniprot id: Q0WWV8
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL39 family.

3702:AT5G45070
gene id: 3702:AT5G45070
uniprot id: Q9FHE9
names: Domain
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT2G13560
gene id: 3702:AT2G13560
uniprot id: A0A178VZ17
uniprot id: Q9SIU0
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates during the night period (at protein level).
messages: Activated by oxaloacetate (OAA), 2-ketoglutarate, succinate and fumarate as homodimer and by OAA, 2-ketoglutarate, succinate, fumarate and coenzyme A (acetyl-CoA and CoA) as heterodimer NAD-MEH.
messages: Belongs to the malic enzymes family.
messages: Divalent metal cations. Prefers magnesium or manganese.
messages: Expressed in leaves, stems, flowers, and roots (at protein level).
messages: Homodimer. Heterodimer of two related subunits in NAD-MEH complex. Interacts with NAD-ME2.
messages: In flowers, mostly present in sepals, stigmatic papillae, gynoecium (apical part) and filaments. Excluded from anthers (at protein level). In developing siliques, localized in the apical part and the abscission zone. In seedlings, expressed in cotyledons, hypocotyls, and root tip. Accumulates slowly in leaves as they mature, in the mesophyll and the cells that surround the vascular bundles.
messages: Involved in the regulation of sugars and amino acids metabolisms during the night period.
messages: Mitochondrion
messages: When associated with NAD-ME2 disruption, loss of NAD-dependent malic enzyme activity associated with an altered steady-state levels of sugars and amino acids at the end of the light period.

3702:AT2G33020
gene id: 3702:AT2G33020
uniprot id: O49329
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT1G59500
gene id: 3702:AT1G59500
uniprot id: Q9LQ68
names: Function
names: Induction
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: By auxin.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin. Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val. Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys. Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA). The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates.

3702:AT3G44970
gene id: 3702:AT3G44970
uniprot id: F4J4C0
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G40670
gene id: 3702:AT5G40670
uniprot id: A0A5S9Y9N9
uniprot id: P57758
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cystinosin (TC 2.A.43.1) family.
messages: Lysosome membrane
messages: Membrane
messages: Thought to transport cystine out of lysosomes.

3702:AT5G15030
gene id: 3702:AT5G15030
uniprot id: F4K8B2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G07702
gene id: 3702:AT2G07702
uniprot id: P93300
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07702) is demonstrated.
messages: Mitochondrion

3702:AT4G15080
gene id: 3702:AT4G15080
uniprot id: A0A5S9XST7
uniprot id: Q8L5Y5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cell membrane
messages: Membrane
messages: Palmitoyl acyltransferase.
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT1G28580
gene id: 3702:AT1G28580
uniprot id: A0A178WBD5
uniprot id: Q9FXJ2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT4G33280
gene id: 3702:AT4G33280
uniprot id: Q8RYD1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G03750
gene id: 3702:AT1G03750
uniprot id: F4I2H2
names: Function
names: Similarity
messages: Belongs to the SNF2/RAD54 helicase family.
messages: May be involved in early DNA damage response (By similarity). Probable chromatin remodeling factor.

3702:AT3G47410
gene id: 3702:AT3G47410
uniprot id: A0A384LFM9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G63940
gene id: 3702:AT5G63940
uniprot id: A0A178URG0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G18890
gene id: 3702:AT3G18890
uniprot id: Q8H0U5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed from day 3 of seedling development and continues throughout the development of photosynthetic tissues.
messages: Expressed in cotyledons and leaves, but not in roots.
messages: Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62 (PubMed:12426385). Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids (By similarity).
messages: No visible phenotype, but loss of membrane-bound LFNR1 or LFNR2.
messages: Part of the Tic complex. Interacts with TIC110 and TIC55. Interacts with LFNR1 and LFNR2. Component of high molecular weight thylakoid LFNRs-containing protein complexes containing LIR1, LFNR1, LFNR2, TIC62 and TROL proteins.
messages: chloroplast inner membrane
messages: chloroplast stroma
messages: chloroplast thylakoid

3702:AT1G43770
gene id: 3702:AT1G43770
uniprot id: B3H578
names: Disruption Phenotype
names: Function
names: Subunit
messages: Interacts directly with AIPP3/BDT1.
messages: No obvious developmental defects (PubMed:33433058). Plants missing all PHD finger-containing proteins (e.g. PHD1, PAIPP2/PHD2, AIPP2/PHD3, PHD4, PHD5 and PHD6) exhibit an increased expression of flowering genes leading to an early flowering phenotype under long-day conditions as well as growth retardation (PubMed:33433058).
messages: Together with AIPP3/BDT1, cooperates to form a BAH-PHD bivalent histone reader complex able to read histone H3 lysine 27 trimethylation (H3K27me3) histone marks in order to regulate transcription, especially to prevent early flowering; promotes AIPP3/BDT1 binding to H3K27me3.

3702:AT1G62820
gene id: 3702:AT1G62820
uniprot id: Q8VZ50
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT1G80920
gene id: 3702:AT1G80920
uniprot id: Q9SAG8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaJ family. C/III subfamily.
messages: Plays a continuous role in plant development probably in the structural organization of compartments.
messages: chloroplast

3702:AT1G77060
gene id: 3702:AT1G77060
uniprot id: O49290
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the isocitrate lyase/PEP mutase superfamily.
messages: chloroplast

3702:AT4G27440
gene id: 3702:AT4G27440
uniprot id: A0A178V808
uniprot id: P21218
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
messages: Circadian-regulation. Not regulated by light.
messages: Expressed in etiolated seedlings.
messages: Expressed in flowers, upper leaves, rosette and cauline leaves, stem. Not detectable in non-photosynthetic tissues such as roots and seeds. Expressed in seedlings and adult plant.
messages: No visible phenotype at the levels of the whole plant or chloroplast ultrastructure; due to the redundancy with PORC. Porb and porc double mutants have a seedling-lethal pale-yellow xantha phenotype at the cotyledon stage, contain only small amounts of Chla, and possess chloroplasts with mostly unstacked thylakoid membranes.
messages: Part of the FLU-containing chloroplast membrane complex composed of FLU, CRD1, PORB, PORC, CHLP and HEMA1 (PubMed:22212719). Interacts with CDF1 in chloroplast (PubMed:24151298).
messages: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).
messages: The presence of TOC33 is required for the import of PORA into plastids in cotyledons and true leaves.
messages: chloroplast
messages: chloroplast outer membrane
messages: chloroplast thylakoid membrane

3702:AT1G07140
gene id: 3702:AT1G07140
uniprot id: A0A178WG12
uniprot id: Q9LMK7
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts with the GTP-bound form of RAN1, RAN2 and RAN3.
messages: Ubiquitous. Preferentially expressed in root tips and gynoecium.
messages: nuclear pore complex

3702:AT5G12840
gene id: 3702:AT5G12840
uniprot id: A0A654G0N9
uniprot id: A0A7G2FA58
uniprot id: B9DGV8
uniprot id: Q1ECD3
uniprot id: Q9LXV5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYA/HAP2 subunit family.
messages: Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
messages: Ubiquitous.

3702:AT5G58800
gene id: 3702:AT5G58800
uniprot id: A0A178UAQ1
uniprot id: Q9LUX9
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the WrbA family.
messages: Binds 1 FMN per monomer.
messages: Catalyzes the transfer of electrons from NADH and NADPH to reduce quinone to the hydroquinone state.

3702:AT4G25390
gene id: 3702:AT4G25390
uniprot id: Q9STJ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT4G39000
gene id: 3702:AT4G39000
uniprot id: Q8GY58
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.
messages: Secreted
messages: The conserved 'Asp-461' active site is replaced by a Gly residue.

3702:AT3G51060
gene id: 3702:AT3G51060
uniprot id: Q9SD40
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SHI protein family.
messages: Expressed in flowers, seeds and seedlings.
messages: Expressed in the apical parts of the developing gynoecium. Detected throughout the youngest flower primordium. Later relocalizes towards the regions of the presumptive sepal anlagen and remains in sepal primordia until just after their emergence. Also observed on the abaxial side of the young floral meristem. Present in the newly arisen gynoecial primordium. Restricted to the apical parts of the carpels as the open-ended gynoecial cylinder elongates vertically. In the apical regions of the gynoecium, confined to a zone in the interphase between the style and the stigma and fades out later. Within the gynoecium, accumulates in ovule primordia, and, as the ovules developed, restricted to the epidermis of the developing funiculi, to the outer, but not the inner, integuments and to the tip of the nucellus. Also present in the cell layer of the septum that faces the ovary. In the embryo, detected in the cotyledon primordia during late globular to mid heart stage. In addition, transiently expressed in petal and stamen primordia and in the tapetum of the anthers.
messages: Forms homodimers and heterodimers with LRP1.
messages: Gynoecia with aberrant style morphology. The double mutant sty1-1 and sty2-1 has a reduction in the amount of stylar and stigmatic tissues and decreased proliferation of stylar xylem, as well as shorter siliques and rosette and cauline leaves with a higher degree of serration. Hypersensitive to 1-N-naphthylphtalamic acid (NPA), but restored by exogenous application of auxin.
messages: Nucleus
messages: Regulated by ESR1 and ESR2.
messages: Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM).

3702:AT3G17205
gene id: 3702:AT3G17205
uniprot id: Q8RWB8
names: Function
names: Similarity
messages: Belongs to the UPL family.
messages: Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins.

3702:AT1G22210
gene id: 3702:AT1G22210
uniprot id: A0A5S9VJU3
uniprot id: F4I1A6
names: Function
names: Similarity
messages: Belongs to the trehalose phosphatase family.
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

3702:AT4G01590
gene id: 3702:AT4G01590
uniprot id: A0A178V5Y9
uniprot id: F4JG25
uniprot id: Q9M123
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic RPC7 RNA polymerase subunit family.
messages: Component of the RNA polymerase III (Pol III) complex.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
messages: Nucleus

3702:AT5G12140
gene id: 3702:AT5G12140
uniprot id: A0A178UCE6
uniprot id: Q945Q1
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the cystatin family. Phytocystatin subfamily.
messages: By wounding, nitric oxide and infection by avirulent pathogen.
messages: Expressed in roots and developing siliques.
messages: Involved in suppression of hypersensitive cell death activated by either avirulent pathogen or oxidative stress.

3702:AT2G23450
gene id: 3702:AT2G23450
uniprot id: Q8RY67
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Lacks the calcium-binding EGF-like domain which is a conserved feature of the wall-associated receptor kinase family.
messages: Membrane
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

3702:AT1G57750
gene id: 3702:AT1G57750
uniprot id: Q9FVS9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in the expanding regions of the inflorescence stems, specifically to the epidermal pavement cells, petioles and siliques.
messages: Involved in the formation of secondary alcohols and ketones in stem cuticular wax. Catalyzes the hydroxylation of a methylene unit in the middle of alkane molecules to form secondary alcohols and possibly also a second hydroxylation leading to the corresponding ketones.
messages: No visible phenotype under normal growth conditions, but stem wax of mutant plants are devoid of secondary alcohols and ketones and have increased alkane amounts.

3702:ArthCp026
gene id: 3702:ArthCp026
uniprot id: A0A1B1W4U5
uniprot id: P56756
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3702:AT3G06700
gene id: 3702:AT3G06700
uniprot id: A0A178VM37
uniprot id: Q9M7X7
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL29 family.

3702:AT2G03690
gene id: 3702:AT2G03690
uniprot id: A0A178VVG8
uniprot id: Q9ZPR0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the COQ4 family.
messages: Component of a multi-subunit COQ enzyme complex.
messages: Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides.
messages: Mitochondrion inner membrane
messages: This protein may be expected to contain an N-terminal transit peptide but none has been predicted.

3702:AT3G04590
gene id: 3702:AT3G04590
uniprot id: A0A178VIN7
uniprot id: A1L4X7
uniprot id: F4J4T1
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT5G05820
gene id: 3702:AT5G05820
uniprot id: A0A178UB06
uniprot id: Q6DBP3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT1G67810
gene id: 3702:AT1G67810
uniprot id: Q9FXE3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SufE family.
messages: Highly expressed in flowers and pollen, and at low levels in roots, leaves and stems.
messages: Participates in cysteine desulfurization mediated by NFS2. Can activate the cysteine desulfurase activity of NFS2 in vitro. Cysteine desulfurization mobilizes sulfur from L-cysteine to yield L-alanine and supplies the inorganic sulfur for iron-sulfur (Fe-S) cluster formation.
messages: chloroplast

3702:AT4G10925
gene id: 3702:AT4G10925
uniprot id: Q93YV9
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT2G18250
gene id: 3702:AT2G18250
uniprot id: Q9ZPV8
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic CoaD family.
messages: Cytoplasm
messages: Inhibited by CoA.
messages: Plants are severely impaired in plant growth and seed production, but almost not affected in the accumulation of total fatty acids per seed.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Does not accept 4'-phosphopantothenoylcysteine as a substrate.

3702:AT1G01700
gene id: 3702:AT1G01700
uniprot id: Q9LQ89
names: Domain
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed in the vascular tissues of roots, leaves, sepals, petals and siliques.
messages: Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP.
messages: Interacts with ARC10/ROP11.
messages: The PRONE (plant-specific Rop nucleotide exchanger) domain is responsible for the GEF activity.

3702:AT1G64780
gene id: 3702:AT1G64780
uniprot id: A0A5S9WPC1
uniprot id: Q9ZPJ8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Ammonium transporter probably involved in ammonium uptake from the soil.
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: High expression in root.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT5G51780
gene id: 3702:AT5G51780
uniprot id: A0A1P8BCN7
uniprot id: A0A654GA97
uniprot id: B9DH81
uniprot id: Q9FLI1
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT5G50570
gene id: 3702:AT5G50570
uniprot id: B9DI20
uniprot id: P0DI11
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Binds 2 Zn(2+) ions per subunit.
messages: Negatively regulated by microRNAs miR156 and miR157.
messages: Nucleus
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.
messages: Weak increase of expression during floral induction.

3702:AT5G42200
gene id: 3702:AT5G42200
uniprot id: Q8L9W3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8, UBC10, UBC11, UBC28 and UBC29 in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G23730
gene id: 3702:AT4G23730
uniprot id: A0A178V3N2
uniprot id: A0A1P8B8W1
uniprot id: A0A1P8B8W5
uniprot id: Q9SUQ4
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

3702:AT4G19650
gene id: 3702:AT4G19650
uniprot id: A0A178V165
uniprot id: A0A384L3J9
uniprot id: F4JTX3
names: Similarity
messages: Belongs to the mTERF family.

3702:AT5G22770
gene id: 3702:AT5G22770
uniprot id: Q8LPL6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 2 (AP-2) is a heterotetramer composed of two large adaptins (alpha-type and beta-type subunits), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit) (By similarity). Binds to EPSIN2.
messages: Belongs to the adaptor complexes large subunit family.
messages: Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The complex binds polyphosphoinositides (By similarity).
messages: coated pit

3702:AT1G72860
gene id: 3702:AT1G72860
uniprot id: A0A178WJ87
uniprot id: A0A384LML1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G48545
gene id: 3702:AT5G48545
uniprot id: A0A1P8BAL2
uniprot id: A0A1P8BAL8
uniprot id: F4K1R2
names: Caution
names: Function
names: Sequence Caution
names: Subcellular Location Annotation
messages: Intron retention.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Peroxisome
messages: Possesses adenylylsulfatase activity in vitro.

3702:AT4G12320
gene id: 3702:AT4G12320
uniprot id: Q66GJ1
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT2G07680
gene id: 3702:AT2G07680
uniprot id: Q9SKX0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: Membrane
messages: Pump for glutathione S-conjugates.
messages: Ubiquitous.

3702:AT2G03820
gene id: 3702:AT2G03820
uniprot id: Q9SI58
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit.
messages: Belongs to the NMD3 family.
messages: Cytoplasm
messages: Nucleus

3702:AT4G23710
gene id: 3702:AT4G23710
uniprot id: A0A384LDY1
uniprot id: O82629
uniprot id: Q0WT72
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase G subunit family.
messages: Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.
messages: Vacuole membrane

3702:AT5G59090
gene id: 3702:AT5G59090
uniprot id: A0A654GCD7
uniprot id: F4KHS1
uniprot id: F4KHS2
uniprot id: Q8L7D2
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in roots after methyl jasmonate (MeJA) treatment.
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: Specifically expressed in root stele of the root hair zone.
messages: The C-terminal propeptide is autocleaved.

3702:AT5G38720
gene id: 3702:AT5G38720
uniprot id: A0A1P8BGF0
uniprot id: A0A1P8BGG1
uniprot id: A0A654G670
uniprot id: Q8GYF9
names: Similarity
messages: Belongs to the RRP7 family.

3702:AT1G76350
gene id: 3702:AT1G76350
uniprot id: Q9SFW8
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.

3702:AT3G49590
gene id: 3702:AT3G49590
uniprot id: Q9SCK0
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATG13 family. Plant subfamily.
messages: Interacts with ATG1A (PubMed:21984698). Interacts with ATG11 and ATG101 (PubMed:24563201).
messages: Involved in autophagy in a nutritional condition dependent manner. The ATG1-ATG13 protein kinase complex regulates downstream events required for autophagosome enclosure and/or vacuolar delivery. Becomes a target of autophagy under nutrient starvation. Connects autophagy to plant nutritional status.
messages: No visible phenotype under normal growth conditions. The double mutant plants atg13a-1 and atg13b-2, or atg13a-2 and atg13b-2 are hypersensitive to nitrogen or carbon starvation and show early senescence.
messages: Phosphorylated during nutrient starvation. Dephosphorylated in nutrient-rich conditions.
messages: autophagosome

3702:AT1G73590
gene id: 3702:AT1G73590
uniprot id: A0A178WFG7
uniprot id: Q9C6B8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a component of the auxin efflux carrier. Seems to be involved in the basipetal auxin transport. Mediates the formation of auxin gradient which is required to ensure correct organogenesis. Coordinated polar localization of PIN1 is directly regulated by the vesicle trafficking process and apical-basal PIN1 polarity also depends on the phosphorylation of conserved serine residues by PID kinase. The ARF-GEF protein GNOM is required for the correct recycling of PIN1 between the plasma membrane and endosomal compartments.
messages: Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
messages: Cell membrane
messages: Down-regulated by endoplasmic reticulum stress treatment.
messages: Expressed at the basal side of elongated parenchymatous xylem cells.
messages: Expressed during embryogenesis. Already detected in the 8-cell stage at the inner cell boundaries. Later, polarity is gradually established at the basal side of provascular cells then in epidermis cells.
messages: Interacts with TOPP4 (PubMed:11574889). Interacts with FYPP1 and FYPP3 (PubMed:22715043).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May act as a component of the auxin efflux carrier.
messages: Membrane
messages: Plants exhibit developed naked, pin-shaped inflorescences and abnormalities in the number, size, shape, and position of lateral organs.

3702:AT2G29460
gene id: 3702:AT2G29460
uniprot id: Q9ZW27
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT2G16770
gene id: 3702:AT2G16770
uniprot id: Q8GTS2
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Induced by zinc deficiency.
messages: No visible phenotype under normal growth conditions (PubMed:20479230, PubMed:26306426). Mutant seedlings grown under normal conditions accumulate reduced levels of zinc in roots. Mutant seedlings grown in zinc-depleted medium have reduced root length (PubMed:26306426).
messages: Nucleus
messages: Transcription factor involved in the response to zinc ion deficiency. Binds to the consensus sequence 5'-[AG]TGTCGACA[CT]-3' also called zinc deficiency response element (ZDRE). The ZDRE sequence is conserved in the plant kingdom and present in the promoters of genes that constitute the primary response to zinc deficiency, comprising additional ZIP metal transporter genes (PubMed:20479230, PubMed:26306426). Required for zinc accumulation in roots. Mediates the expression of the zinc transporter ZIP12 during growth in zinc-deficient conditions. ZIP12 transporter is involved in zinc uptake in roots (PubMed:26306426).

3702:AT1G71220
gene id: 3702:AT1G71220
uniprot id: A0A178W3S9
uniprot id: A0A178W3V2
uniprot id: A0A1P8AVX3
uniprot id: Q0WL80
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Endoplasmic reticulum lumen
messages: No visible phenotype, but activation of the unfolded protein response. Loss of seedling growth inhibition in response to the pathogen-associated molecular pattern (PAMP) elf18.
messages: Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation. Required for elongation factor Tu receptor (EFR), but not flagellin-sensing 2 (FLS2) signaling.
messages: The N-terminal non-catalytic domain is assumed to mediate recognition of proteins with partial folding defects.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G62950
gene id: 3702:AT3G62950
uniprot id: A0A178V8G0
uniprot id: Q9LYC6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).

3702:AT4G33640
gene id: 3702:AT4G33640
uniprot id: A0A178V1V2
uniprot id: A0A384L2X9
uniprot id: Q8LBN7
names: Similarity
messages: Belongs to the costars family.

3702:AT1G51240
gene id: 3702:AT1G51240
uniprot id: Q9SYC6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G22020
gene id: 3702:AT1G22020
uniprot id: A0A7G2DUS2
uniprot id: Q9LM59
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the interconversion of serine and glycine.
messages: Cytoplasm
messages: Homotetramer.
messages: Interconversion of serine and glycine.

3702:AT3G28970
gene id: 3702:AT3G28970
uniprot id: A0A1I9LN05
uniprot id: Q9MBG8
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
messages: May contribute to the neddylation of all cullins by transferring NEDD8 from N-terminally acetylated NEDD8-conjugating E2s enzyme to different cullin C-terminal domain-RBX complexes; neddylation of cullins play an essential role in the regulation of SCF-type complexes activity (By similarity). Regulates responses to the synthetic auxin 2,4-dichlorophenoxyacetic acid (2,4-D) in roots, probably by modulating the SCF(TIR1) ubiquitin E3 ligase complex-mediated proteolysis (PubMed:17905859).
messages: Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
messages: Nucleus
messages: Root growth resistance to the anti-auxin p-chlorophenoxyisobutyric acid (PCIB), which inhibits auxin action by interfering the upstream auxin-signaling events (PubMed:17905859). Also resistant to the auxin analog 2,4-dichlorophenoxyacetic acid (2,4-D) herbicide (PubMed:17905859).
messages: The DCUN1 domain, also known as PONY domain, mediates the interaction with different cullins.

3702:AT3G46790
gene id: 3702:AT3G46790
uniprot id: Q9STF3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Abolished chloroplast NADH dehydrogenase-like (NDH) complex-dependent cyclic electron transport (CET) around photosystem I (PSI) (PubMed:32978277). The double mutant crr2 kea3 enhances the kea3 single mutant phenotypes, and delays induction of CO(2) fixation after overnight dark adaptation (PubMed:32978277).
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Required for the intergenic processing between chloroplast rsp7 and ndhB transcripts (PubMed:14617084). Necessary for chloroplast NADH dehydrogenase-like (NDH) complex-dependent cyclic electron transport around PSI (CET) (PubMed:32978277).
messages: chloroplast

3702:AT4G14390
gene id: 3702:AT4G14390
uniprot id: A0A1P8B807
uniprot id: A0A1P8B809
uniprot id: A0A1P8B825
uniprot id: F4JVF4
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G19080
gene id: 3702:AT2G19080
uniprot id: A0A178VY14
uniprot id: O64471
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metaxin family.
messages: Decreased growth, abnormal leaf morphology and ectopic floral development and sterility. Higher starch accumulation in chloroplasts and reduced rates of mitochondrial protein import.
messages: Expressed in roots, young cotyledons, flowers and leaves.
messages: Involved in transport of proteins into the mitochondrion.
messages: Mitochondrion inner membrane
messages: Mitochondrion outer membrane
messages: Part of a high molecular weight complex that is distinct from the TOM complex. Interacts with a variety of mitochondrial precursor proteins.

3702:AT5G08500
gene id: 3702:AT5G08500
uniprot id: A0A1P8BG69
uniprot id: Q9FNN8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CLPTM1 family.
messages: Membrane

3702:AT2G03240
gene id: 3702:AT2G03240
uniprot id: A0A178VTL2
uniprot id: Q6R8G5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SYG1 (TC 2.A.94) family.
messages: Cell membrane
messages: Expressed in root tips, vascular cylinders of roots and filaments, leaf petioles, stem, receptacle, stigma apex and anther connective tissue.
messages: May transport inorganic phosphate (Pi).
messages: Membrane
messages: Not induced by Pi deficiency.

3702:AT4G31000
gene id: 3702:AT4G31000
uniprot id: F4JR57
uniprot id: F4JR58
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant ACBP60 protein family.
messages: Interacts with calmodulin (CaM).
messages: Nucleus
messages: Transcription activator that binds DNA in a sequence-specific manner, likely 5'-GAAATTTTGG-3', to promote the expression of target genes.

3702:AT1G69485
gene id: 3702:AT1G69485
uniprot id: Q5Q0D8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

3702:AT4G09680
gene id: 3702:AT4G09680
uniprot id: A0A1P8B816
uniprot id: D0EL35
uniprot id: F4JKR3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CTC1 family.
messages: Component of the CST complex, a complex that binds to single-stranded DNA and is required to protect telomeres from DNA degradation. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves (PubMed:19854131). Associates with enzymatically active telomerase (PubMed:25329641).
messages: Component of the CST complex, composed of CTC1, TEN1 and STN1. Interacts with POT1A (PubMed:25329641).
messages: Nucleus
messages: Severe telomere deprotection accompanied by a rapid onset of developmental defects and sterility. The large majority of plants have grossly distorted floral phyllotaxy with an irregular branching pattern and fasciated (thick and broad) main and lateral stems and siliques. Although most mutants produce an influorescence bolt, this structure is highly variable in size, ranging from very short to wild-type. Flowers and siliques are often fused, and seed yield is typically reduced to 10% of wild-type. The germination efficiency of the few seeds that could be recovered was extremely low. Telomeric and subtelomeric tracts are dramatically eroded, and chromosome ends exhibit increased G overhangs, recombination, and end-to-end fusions.
messages: telomere

3702:AT1G23140
gene id: 3702:AT1G23140
uniprot id: A0A178WBV5
uniprot id: O49303
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus.
messages: Cell membrane
messages: Membrane
messages: Nucleus
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity).

3702:AT5G63630
gene id: 3702:AT5G63630
uniprot id: A0A654GDR2
uniprot id: Q9FFQ1
names: Domain
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: RNA helicase.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G11915
gene id: 3702:AT1G11915
uniprot id: A0A178WRH5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G64560
gene id: 3702:AT5G64560
uniprot id: A0A178UMK2
uniprot id: Q9FLG2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.
messages: Expressed in the whole plant but preferentially in the mature anthers.
messages: Has the ability to complement mutants in Salmonella enterica and yeast lacking magnesium transport capability.
messages: Low-affinity magnesium transporter that mediates the influx of magnesium. Plays a crucial role in male gametophyte development and male fertility.
messages: Magnesium transporter that may mediate the influx of magnesium.
messages: May be due to an intron retention.
messages: Membrane

3702:AT2G37430
gene id: 3702:AT2G37430
uniprot id: Q9SLD4
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in leaves.
messages: Nucleus
messages: Probable transcription factor that may be involved in stress responses.

3702:AT1G50380
gene id: 3702:AT1G50380
uniprot id: A0A1P8ATN7
uniprot id: A0A7G2DZN8
uniprot id: Q9SX53
names: Similarity
messages: Belongs to the peptidase S9A family.

3702:AT3G06050
gene id: 3702:AT3G06050
uniprot id: A0A178VBA5
uniprot id: A0A1I9LRF4
uniprot id: Q9M7T0
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxiredoxin family. Prx5 subfamily.
messages: By oxidative stress.
messages: Expressed in the whole plant.
messages: Mitochondrion matrix
messages: Monomer.
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this 1-Cys peroxiredoxin, no C(R) is present and C(P) instead forms a disulfide with a cysteine from another protein or with a small thiol molecule. C(P) can be reactivated by glutathione or the mitochondrial glutaredoxin (Grx) or thioredoxin (Trx) systems.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Reduces preferentially hydrogen peroxide rather than alkyl peroxides. May be involved in mitochondrial redox homeostasis.

3702:AT2G33810
gene id: 3702:AT2G33810
uniprot id: A0A178W1W0
uniprot id: P93015
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Expressed in vegetative and inflorescence apical meristems, floral meristems, leaf and flower organ primordia, inflorescence stem tissue and to lower extent in roots.
messages: Increases during floral transition and stay high thereafter.
messages: It is uncertain whether Met-1 or Met-3 is the initiator.
messages: Negatively regulated by microRNAs miR156.
messages: Nucleus
messages: Plants flower early and have a significantly reduced number of juvenile, adult and cauline leaves, with a shorter petiole and a more acute leaf base in the first two leaves.
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Binds specifically to the 5'-GTAC-3' core sequence. Promotes both vegetative phase change and flowering. Regulates phase-specific patterns of leaf epidermal differentiation and flowering time, but does not seem to affect leaf shape.

3702:AT2G47420
gene id: 3702:AT2G47420
uniprot id: A0A178VWJ8
uniprot id: O22268
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
messages: Expressed in rapidly dividing tissues, including root meristems and lateral root primordia, developing cotyledons and leaves, petals, anther, pollen grains and silique abscission zone.
messages: N6-adenine methyltransferase which modifies the AA dinucleotide at the plant nuclear 18S rRNA nucleotides A1785 and A1786 (PubMed:22829145). Required for generating appropriate patterns of gene expression during root development, including the cell-specific expression of transcriptional regulators involved in root hair and non-hair cells patterning (PubMed:22829145).
messages: Nucleus
messages: The inability to isolate a null mutant suggests that DIM1A is essential for viability.
messages: nucleolus

3702:AT3G27600
gene id: 3702:AT3G27600
uniprot id: A0A654FI08
uniprot id: F4IWK8
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G53570
gene id: 3702:AT3G53570
uniprot id: P51566
names: Function
names: Similarity
messages: Activator of yeast transcription factor, STE12.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. Lammer subfamily.

3702:AT5G38790
gene id: 3702:AT5G38790
uniprot id: A0A654G652
uniprot id: Q9FKQ9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SOFL plant protein family.
messages: Cytoplasm
messages: Domains SOFL-A and SOFL-B are required for function in cytokinin-mediated development.
messages: Expressed, at low levels, in seedlings, roots, flowers and siliques.
messages: Involved in cytokinin-mediated development.
messages: Nucleus

3702:AT1G54170
gene id: 3702:AT1G54170
uniprot id: Q8L793
names: Domain
messages: Contains a tandem repeat of a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.

3702:AT3G49645
gene id: 3702:AT3G49645
uniprot id: A0A384KU80
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G63340
gene id: 3702:AT1G63340
uniprot id: Q9C8T8
names: Caution
names: Function
names: Similarity
messages: Belongs to the FMO family.
messages: Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.
messages: Could be the product of a pseudogene.

3702:AT3G10260
gene id: 3702:AT3G10260
uniprot id: A0A178V9N5
uniprot id: Q9SS37
names: Miscellaneous
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: May be due to intron retention.
messages: Membrane

3702:AT3G22961
gene id: 3702:AT3G22961
uniprot id: Q9LIJ9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G05190
gene id: 3702:AT4G05190
uniprot id: A0A1P8B702
uniprot id: F4JGP4
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: By measuring the velocity of microtubule translocation, the speed of ATK5 was determined to be 6.30 um/min at 20 degrees Celsius.
messages: Composed of three structural domains; a small globular N-terminal, a central alpha-helical coiled coil and a large globular C-terminal which is responsible for the motor activity (it hydrolyzes ATP and binds microtubules).
messages: Kinesin that supports microtubule movement in an ATP-dependent manner and that functions as a minus-end directed motor as well as a plus-end tracking protein. During mitosis, is involved in early spindle assembly. Participates in the capture of antiparallel interpolar microtubules and helps in generating force to coalign microtubules.
messages: No visible phenotype under normal growth conditions, but dividing cells of mutant plants exhibit abnormally broadened mitotic spindles in metaphase and anaphase. However, this does not affect chromosome alignment and segregation. Kin14c and kin14d double mutant is gametophytically lethal (PubMed:18088313).
messages: Slightly expressed in anther lobes with pollen mother cells at anther stage 5. Strongly expressed at anther stage 6 in the tapetum and meiotic cells. Also detected in the gynoecium and the ovule.
messages: cytoskeleton
messages: phragmoplast

3702:AT4G18190
gene id: 3702:AT4G18190
uniprot id: A0A654FQF6
uniprot id: O49722
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT1G75660
gene id: 3702:AT1G75660
uniprot id: A0A5S9WUP9
uniprot id: Q9FQ03
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 5'-3' exonuclease family. XRN2/RAT1 subfamily.
messages: Embryonic lethality.
messages: Expressed in roots, leaves, stems and flowers.
messages: Nucleus
messages: Possesses 5'->3' exoribonuclease activity (PubMed:11106401). Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. Degrades miRNA-derived loops, excised during miRNA maturation in the nucleus. Required for proper development (PubMed:17993620). Involved in pre-rRNA processing. Involved with XRN2 in the 5'-end exonucleolytic processing of 5.8S and 25S rRNAs. Contributes with XRN2 to polyadenylation-dependent nuclear RNA surveillance. Involved in the degradation of aberrant polyadenylated pre-rRNA through 5'-end processing (PubMed:20338880).
messages: Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.

3702:AT5G01780
gene id: 3702:AT5G01780
uniprot id: A0A1P8BHF5
uniprot id: F4KAV1
uniprot id: F4KAV2
names: Cofactor
messages: Binds 1 Fe(2+) ion per subunit.

3702:AT3G52920
gene id: 3702:AT3G52920
uniprot id: A0A384L4Z9
uniprot id: A0A384L6H1
uniprot id: Q8L9S7
uniprot id: Q9LF99
names: Similarity
messages: Belongs to the GORAB family.

3702:AT1G08370
gene id: 3702:AT1G08370
uniprot id: Q9SJF3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: As a component of the decapping complex, involved in the degradation of mRNAs. Essential for postembryonic development.
messages: Belongs to the DCP1 family.
messages: Expressed in seedlings, mostly in root tips, root hairs, and the vascular system. Also present in roots, leaves, stems, and flowers.
messages: Gradually accumulates during seed maturation to reached maximum levels in dry seeds. Fades progressively upon germination.
messages: Homodimer. Component of the decapping complex. Interacts with DCP2 and DCP5 (PubMed:17158604, PubMed:19855049). Interacts with BCHA1 (PubMed:26133670).
messages: Lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology.
messages: P-body

3702:AT5G61570
gene id: 3702:AT5G61570
uniprot id: A0A178UK40
uniprot id: A0A178UKF5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G24390
gene id: 3702:AT4G24390
uniprot id: Q8RWQ8
names: Domain
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex. May interact with auxin and auxin-responsive proteins (By similarity).
messages: The F-box is necessary for the interaction with SKP1.
messages: The myo-inositol hexakisphosphate acts as a structural cofactor.

3702:AT4G21190
gene id: 3702:AT4G21190
uniprot id: Q8LG95
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G59180
gene id: 3702:AT5G59180
uniprot id: A0A178UBZ0
uniprot id: P38421
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family.
messages: Component of the RNA polymerase II complex consisting of at least 12 subunits. Interacts with NRPB4.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB7 is part of a subcomplex with NRPB4 that binds to a pocket formed by NRPB1, NRPB2 and NRPB6 at the base of the clamp element. The NRBP4-NRPB7 subcomplex seems to lock the clamp via NRPB7 in the closed conformation thus preventing double-stranded DNA to enter the active site cleft. The NRPB4-NRPB7 subcomplex binds single-stranded DNA and RNA (By similarity).
messages: DNA-dependent RNA polymerase which catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Nucleus

3702:AT1G21720
gene id: 3702:AT1G21720
uniprot id: A0A178WJZ7
uniprot id: Q9XI05
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1B family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: May be due to intron retention.
messages: Non-catalytic component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Nucleus

3702:AT1G71800
gene id: 3702:AT1G71800
uniprot id: Q9M9G6
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CSTF complex (By similarity). Binds to mRNA. Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits CSTF50, CSTF77, FIPS3 and FIPS5 (PubMed:12379796, PubMed:18479511, PubMed:18221017).
messages: Impaired antisense-RNA-mediated gene silencing (e.g. suppression of overexpression of FCA-mediated FLC repression). Reduced fertility, early flowering, reduced organ size and pale leaves.
messages: Nucleus
messages: One of the multiple factors required for polyadenylation and 3'-end cleavage of pre-mRNAs (By similarity). This subunit is directly involved in the binding to pre-mRNAs, especially on the 3' non-coding region (PubMed:12379796). Required for the targeted 3' processing of antisense transcripts that triggers transcriptional silencing of the corresponding sense gene (PubMed:17008405, PubMed:19965720).

3702:AT5G09990
gene id: 3702:AT5G09990
uniprot id: A0A178UHZ6
uniprot id: Q8LD63
names: Function
names: Similarity
messages: Belongs to the brassicaceae elicitor peptide family.
messages: Elicitor of plant defense.

3702:AT4G15760
gene id: 3702:AT4G15760
uniprot id: F4JK85
uniprot id: O81815
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the 3-hydroxybenzoate 6-hydroxylase family.
messages: Expressed in seedlings, roots, leaves, flowers and siliques.
messages: Induced by A.brassicicola, especially in cv. Di-G during compatible interaction.
messages: Monomer.

3702:AT4G31440
gene id: 3702:AT4G31440
uniprot id: A0A178V032
uniprot id: Q9SV25
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G44910
gene id: 3702:AT3G44910
uniprot id: Q9FYC0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: Expressed in pollen.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane

3702:AT1G22340
gene id: 3702:AT1G22340
uniprot id: A0A654ECX1
uniprot id: Q9LME8
uniprot id: W8Q7B8
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Expressed in roots, shoots, leaves and flowers.

3702:AT4G06676
gene id: 3702:AT4G06676
uniprot id: Q5BPL5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EI24 (TC 9.B.7) family.
messages: Membrane

3702:AT5G27990
gene id: 3702:AT5G27990
uniprot id: A0A5S9YA62
uniprot id: Q8L9R4
names: Similarity
messages: Belongs to the TSR2 family.

3702:AT3G53500
gene id: 3702:AT3G53500
uniprot id: A0A178V7R7
uniprot id: Q9FYB7
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family. RS2Z subfamily.
messages: Component of the spliceosome.
messages: Extensively phosphorylated on serine residues in the RS domain.
messages: Nucleus
messages: Probably involved in intron recognition and spliceosome assembly.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: The splicing pattern of the pre-mRNA is regulated in a tissue-specific manner and by development, and changes in response to various types of abiotic stresses.

3702:AT5G09470
gene id: 3702:AT5G09470
uniprot id: A0A178UKG1
uniprot id: Q9FY68
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane
messages: Mitochondrion inner membrane
messages: PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage (By similarity). Recombinant PUMP6, reconstituted into liposomes, transports a wide range of dicarboxylic acids including malate, oxaloacetate and succinate as well as phosphate, sulfate and thiosulfate. However, it is unknown if these transports are of any biological significance in vivo.

3702:AT1G07610
gene id: 3702:AT1G07610
uniprot id: Q38804
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the metallothionein superfamily. Type 15 family.
messages: Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Confers tolerance to cadmium (Cd) and plays a role in Cd and zinc (Zn) homeostasis (PubMed:16240177).
messages: Widely expressed at low levels.

3702:AT4G09153
gene id: 3702:AT4G09153
uniprot id: A0A178V4R9
uniprot id: P82751
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G23230
gene id: 3702:AT4G23230
uniprot id: Q8W4G6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT2G17500
gene id: 3702:AT2G17500
uniprot id: A0A178VQ70
uniprot id: Q9SHL8
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the auxin efflux carrier (TC 2.A.69.2) family.
messages: Endoplasmic reticulum membrane
messages: Expressed in seedlings, cauline leaves and flowers.
messages: Increased root growth and lateral root initiation.
messages: Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by auxin application.

3702:AT1G63280
gene id: 3702:AT1G63280
uniprot id: A0A654EQQ1
uniprot id: Q9C8T2
names: Similarity
messages: Belongs to the serpin family.

3702:AT5G06000
gene id: 3702:AT5G06000
uniprot id: Q9FI86
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit G family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm
messages: RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.

3702:AT5G02450
gene id: 3702:AT5G02450
uniprot id: A0A178UKY0
uniprot id: Q9LZ57
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL36 family.

3702:AT3G13730
gene id: 3702:AT3G13730
uniprot id: A0A178VBI6
uniprot id: A0A178VDZ8
uniprot id: A0A384L4N6
uniprot id: Q94IA6
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in leaf vascular tissue.
messages: Involved in brassinosteroid (BR) biosynthesis (PubMed:15703058, PubMed:17138693). May convert teasterone (TE) to 3-dehydroteasterone (3DT, 3-DHT), or 6-deoxoteasterone (6-deoxoTE) to 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo3DHT) (PubMed:15703058). C-23 hydroxylase that converts directly (22S,24R)-22-hydroxy-5-alpha-ergostan-3-one and 3-epi-6-deoxocathasterone to 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo3DHT) and 6-deoxotyphasterol (6-deoxoTY), respectively (PubMed:17138693). These C-23 hydroxylation shortcuts bypass campestanol, 6-deoxocathasterone, and 6-deoxoteasterone (6-deoxoTE) (PubMed:17138693). Catalyzes also the conversion of cathasterone to teasterone (TE), 6-deoxotyphasterol (6-deoxoTY) to 6-deoxocathasterone (6-deoxoCT), (22S,24R)-22-hydroxyergost-4-en-3-one (22-OH-4-en-3-one) to (22R,23R)-22,23-dihydroxy-campest-4-en-3-one (22,23-diOH-4-en-3-one) and (22S)-22-hydroxycampesterol (22-OHCR) to (22R,23R)-22,23-dihydroxycampesterol (22,23-diOHCR) (PubMed:17138693).
messages: No visible phenotype under normal growth conditions, but the double mutant plants cyp90c1 and cyp90d1 exhibit a characteristic brassinosteroid-deficient dwarf phenotype.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G45640
gene id: 3702:AT2G45640
uniprot id: A0A178VW39
uniprot id: F4IG85
uniprot id: O64644
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the SAP18 family.
messages: By salt, cold, drought, abscisic acid and ethylene treatment.
messages: Interacts with SIN3, ERF3, ERF4 and HDA19.
messages: Involved in the tethering of the SIN3 complex to core histone proteins.
messages: Links the histone deacetylase complex to transcriptional repressors bound to chromatin. Involved in the tethering of the SIN3 complex to core histone proteins.
messages: Plants are hypersensitive to salt.
messages: Ubiquitous, with low level in flowers.

3702:AT5G24890
gene id: 3702:AT5G24890
uniprot id: Q8L9W8
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with HDA19; Ser-213 is critical for this interaction.
messages: Nucleus
messages: The kinase-inducible domain (KID, 202-229) is required for interaction with HDA19.
messages: Transcription activator which may regulates gene expression through interaction with the histone deacetylase HDA19 (By similarity). Promotes slightly the tolerance to cadmium (Cd) and to oxidizing chemicals (e.g. diamide and tert-butyl hydroperoxide (t-BOOH)) (PubMed:18980652).

3702:AT1G69990
gene id: 3702:AT1G69990
uniprot id: C0LGI5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G75600
gene id: 3702:AT1G75600
uniprot id: A0A178WMI0
uniprot id: Q9LR02
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity).
messages: Expressed in roots, seedlings, leaves and open flowers.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G74320
gene id: 3702:AT1G74320
uniprot id: Q8L518
names: Function
names: Induction
names: Similarity
messages: Belongs to the choline/ethanolamine kinase family.
messages: By wounding, and salt and osmotic stresses.
messages: Involved in phospholipid biosynthesis. Catalyzes the first step in phosphatidylcholine biosynthesis (By similarity).

3702:AT1G02540
gene id: 3702:AT1G02540
uniprot id: A0A178W7A4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G33230
gene id: 3702:AT4G33230
uniprot id: Q9SMY6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in flower buds and pollen.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: Membrane
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.

3702:AT3G50750
gene id: 3702:AT3G50750
uniprot id: A0A178VA20
uniprot id: Q9S7F3
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BZR/LAT61 family.
messages: Functions in brassinosteroid signaling. May function as transcriptional repressor.
messages: Nucleus
messages: Phosphorylated. Phosphorylation increases protein degradation.

3702:AT1G07750
gene id: 3702:AT1G07750
uniprot id: Q9LQQ3
names: Similarity
messages: Belongs to the 11S seed storage protein (globulins) family.

3702:AT1G08010
gene id: 3702:AT1G08010
uniprot id: Q6DBP8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT2G27820
gene id: 3702:AT2G27820
uniprot id: Q9ZUY3
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine (PubMed:17726025). Together with GCR1 and GPA1, required for blue light-mediated synthesis of phenylpyruvate and subsequently of phenylalanine (Phe), in etiolated seedlings (PubMed:16415218).
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Has no detectable prehenate dehydratase activity.
messages: Lack of Phe and Tyr accumulation after blue light irradiation of etiolated seedlings.
messages: May interact with GPA1.
messages: Was reported to be a cytosolic prephenate dehydratase interacting with a G-protein alpha-subunit.
messages: chloroplast stroma

3702:AT3G47740
gene id: 3702:AT3G47740
uniprot id: Q1PEH6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Membrane

3702:AT1G72050
gene id: 3702:AT1G72050
uniprot id: A0A178WFL7
uniprot id: Q84MZ4
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds in vitro potato spindle tuber viroid (PSTVd) RNA.
messages: Both isoforms 1 and 2 transcripts are expressed in seedlings and both TFIIIA and TFIIIA-C are present at similar ratios in 10-day-old seedlings (at protein level). In correlation with the reorganization of 5S rDNA chromatin to a mature state, full-length isoform 1 protein TFIIIA with transcriptional activity accumulates and permits de novo transcription of 5S rRNA. Isoforms 1 and 2 transcripts accumulate in various tissues of the reproductive phase, including flowers and siliques, but only isoform 2 is present in mature seeds. In flowers, both TFIIIA and TFIIIA-C are present at similar ratios (at protein level). Very low amounts of TFIIIA are found in extracts from fresh siliques compared to TFIIIA-C. The amount of full-length TFIIIA protein progressively increases from fresh siliques to seeds concomitant with lower proportions of the shorter TFIIIA-C protein (at protein level) thus leading to 5S rRNA accumulation in the seed.
messages: Degraded through the nonsense-mediated mRNA decay (NMD) pathway in a regulated unproductive splicing and translation (RUST) process.
messages: Essential protein (PubMed:22353599). Isoform 1 is a transcription activator the binds both 5S rDNA and 5S rRNA and stimulates the transcription of 5S rRNA gene (PubMed:12711688, PubMed:22353599). Isoform 1 regulates 5S rRNA levels during development (PubMed:22353599).
messages: Expressed in seedlings, flowers, siliques and seeds.
messages: Lethal.
messages: Nucleus
messages: Protein product TFIIIA (44 kDa) is proteolytically cleaved into TFIIIA-C (34 kDa).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus

3702:AT1G06920
gene id: 3702:AT1G06920
uniprot id: A0A5S9SZS4
uniprot id: F4HNU8
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in root vascular cylinder, root tips, xylem of stems, flower buds and siliques.
messages: Interacts with BLH1, BLH2, BLH3, BLH6, BLH10, KNAT1, KNAT3, KNAT4, KNAT5, KNAT6 and KNAT7.
messages: Moderate irregular xylem, but normal plant morphology.
messages: Nucleus
messages: Plants over-expressing OFP4 show kidney-shaped cotyledons, round and curled leaves, small rosette size, late flowering, reduced fertilization and round seeds.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors. Forms a transcription repression complex with KNAT7 which regulates secondary cell wall formation.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT5G14870
gene id: 3702:AT5G14870
uniprot id: Q9LEQ3
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Cyclic nucleotide-gated ion channel required for directional pollen tube growth into the transmitting tract (PubMed:17726111, PubMed:26929345). Acts as a Ca(2+)-permeable divalent cation-selective channel inhibited by either lanthanum or gadolinium (PubMed:24380879). Regulated by CPK32 to mediate Ca(2+) transport across the plasma membrane in response to Ca(2+) oscillation (PubMed:24121288).
messages: Cytoplasmic vesicle membrane
messages: Expressed in pollen grains. Not detected in leaves, roots or root hairs.
messages: Homomultimer (PubMed:24380879). Interacts with CPK32 (PubMed:24121288).
messages: Male sterility.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.
messages: The transmembrane domains are indispensable for pollen tube guidance.

3702:AT1G14220
gene id: 3702:AT1G14220
uniprot id: A0A178W938
uniprot id: Q9XI64
names: Similarity
messages: Belongs to the RNase T2 family.

3702:AT5G61600
gene id: 3702:AT5G61600
uniprot id: A0A654GD59
uniprot id: Q9FKG1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G57780
gene id: 3702:AT1G57780
uniprot id: Q9FVS0
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Probable heavy-metal-binding protein.
messages: The HMA domain lacks the core conserved Cys-X-X-Cys motif.

3702:AT1G75080
gene id: 3702:AT1G75080
uniprot id: A0A178WJU2
uniprot id: Q8S307
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in the growing region of the hypocotyl.
messages: Belongs to the BZR/LAT61 family.
messages: By brassinosteroid (BR) (PubMed:15681342). Up-regulated in response to abscisic acid (ABA) via epigenetic regulation on repressive histone marks (H3K27me3) mediated by JMJ30 and JMJ32 (PubMed:33324437).
messages: Functions in brassinosteroid signaling. May function as transcriptional repressor.
messages: Homodimer (PubMed:30287951). Interacts with BIN2 through its C-terminal fragment (PubMed:12427989, PubMed:12114546). Interacts with MKK5 (PubMed:24019147). Interacts with SAUR50 (PubMed:23020777). Interacts with B'ALPHA, B'BETA, B'ETA and B'THETA (PubMed:21258370).
messages: In bzr1-1D, weak dwarf phenotype with reduced hypocotyl and petiole lengths and dark green curled leaves when light-grown. Increased cell elongation in the dark. Hypersensitive to brassinosteroid (BR).
messages: Nucleus
messages: Phosphorylated by BIN2 and MKK5 in response to brassinosteroid (BR). Dephosphorylation level is consistent with ovule and seed number.
messages: Phosphorylation by BIN2 increases protein degradation and/or interferes with the nuclear localization.
messages: Transcriptional repressor that binds to the brassinosteroid (BR) response element (BRRE) 5'-CGTG(T/C)G-3' in gene promoter. Regulates positively the brassinosteroid-signaling pathway (PubMed:33324437). Mediates downstream growth responses and negative feedback regulation of brassinosteroid biosynthesis. Promotes growth. Modulates ovule initiation and development by monitoring the expression of genes related to ovule development (e.g. HLL, ANT, and AP2). Regulates negatively the abscisic acid (ABA) signaling pathway during the post-germination stage (PubMed:33324437).

3702:AT1G61720
gene id: 3702:AT1G61720
uniprot id: Q9SEV0
names: Activity Regulation
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.
messages: Flowers and young siliques. Detected specifically in the endothelium of seed coat.
messages: From fertilization until pre-globular embryo stage.
messages: Homo- or heterodimer.
messages: Inhibited by (+)-catechin, quercetin and (+)- and (-)-dihydroquercetin. Not inhibited by salt. Positive cooperativity with NADPH acting as cosubstrate and modulator.
messages: Involved in the biosynthesis of condensed tannins. Converts cyanidin into (-)-epicatechin as the major product.
messages: Regulated by TRANSPARENT TESTA 2, TRANSPARENT TESTA 8 and TRANSPARENT TESTA GLABRA 1.

3702:AT3G22230
gene id: 3702:AT3G22230
uniprot id: A0A178VE56
uniprot id: Q8LCL3
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL27 family.

3702:AT5G58782
gene id: 3702:AT5G58782
uniprot id: A0A1P8BG36
uniprot id: Q8GY03
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.
messages: Endoplasmic reticulum membrane

3702:AT2G02750
gene id: 3702:AT2G02750
uniprot id: Q1PFA6
names: Sequence Caution
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Sequencing errors.

3702:AT3G46730
gene id: 3702:AT3G46730
uniprot id: Q9STE7
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family. RPP13 subfamily.
messages: Potential disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT4G15420
gene id: 3702:AT4G15420
uniprot id: A0A1P8B7F5
uniprot id: A0A654FPR4
uniprot id: Q8W1E7
names: Similarity
messages: Belongs to the UFD1 family.

3702:AT4G38040
gene id: 3702:AT4G38040
uniprot id: A0A178UXK7
uniprot id: C0Z2E1
uniprot id: Q9SZK4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G27880
gene id: 3702:AT2G27880
uniprot id: Q9SJK3
names: Function
names: Similarity
messages: Belongs to the argonaute family. Ago subfamily.
messages: Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Main component of the RNA-induced silencing complex (RISC) that binds to a short guide RNA such as a microRNA (miRNA) or small interfering RNA (siRNA). RISC uses the mature miRNA or siRNA as a guide for slicer-directed cleavage of homologous mRNAs to repress gene expression. Associates with siRNAs of various sizes, from 21-24 nucleotide in length and preferentially recruits small RNAs with a 5' terminal cytosine. Probably involved in antiviral RNA silencing. Associates with siRNAs derived from cucumber mosaic virus (CMV). Targeted by the turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO5 function in RNA silencing.

3702:AT1G28390
gene id: 3702:AT1G28390
uniprot id: F4HWL9
uniprot id: Q9SGN7
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT1G16860
gene id: 3702:AT1G16860
uniprot id: Q9FZ45
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G11160
gene id: 3702:AT1G11160
uniprot id: A0A1P8AW58
uniprot id: A0A1P8AW68
uniprot id: A0A1P8AW69
uniprot id: F4I7E1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat KATNB1 family.
messages: Component of KTN80-KTN1 complexes composed of a hexamer of KTN1-KTN80 heterodimers that sense microtubule (MT) geometry to confer precise MT severing (PubMed:28978669). Interacts directly with AAA1/KTN1 and KTN80.3, and weakly with KTN80.4 (PubMed:28978669).
messages: Expressed at low levels in siliques, flowers, leaves, stems and roots.
messages: May participate in a complex which severs microtubules in an ATP-dependent manner (By similarity). Microtubule severing may promote rapid reorganization of cellular microtubule arrays (By similarity). Confers precision to microtubule (MT) severing by specific targeting of KTN1 to MT cleavage sites such as crossover or branching nucleation sites (PubMed:28978669). Together with other KTN80s, regulates cell elongation by modulating MT organization (PubMed:28978669).
messages: May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
messages: The double mutant ktn80.1 ktn80.2 exhibits normal growth, but the quadruple mutant ktn80.1 ktn80.2 ktn80.3 ktn80.4 has a severe dwarf phenotype, with small and round dark-green rosette leaves as well as wide and short petioles, probably due to cell elongation defects, and associated with a complex cortical microtubule (MT) network with stable entanglements (PubMed:28978669). Plants missing KTN80s have a disruption of KTN1 recruitment at MT crossover or branching nucleation sites, leading to an abolishment of MT severing (PubMed:28978669).
messages: cytoskeleton

3702:AT5G65720
gene id: 3702:AT5G65720
uniprot id: A0A178UTE9
uniprot id: O49543
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
messages: Catalyzes the removal of elemental sulfur from cysteine to produce alanine. Supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters.
messages: Interacts with FH (PubMed:22511606). Interacts with SUFE1 (PubMed:16437155).
messages: Lethal when homozygous.
messages: Mitochondrion
messages: Threefold increase in the catalytic activity in the presence of FH (frataxin) (PubMed:22511606). 30-fold increase in the catalytic activity in the presence of SUFE1 (PubMed:16437155).

3702:AT4G01037
gene id: 3702:AT4G01037
uniprot id: A0MFS5
names: Function
names: Subcellular Location Annotation
messages: RNA-binding protein involved in group II intron splicing. Binds specific group II introns and promotes their splicing. Functions in the context of a heterodimer with the ribonuclease III domain-containing protein RNC1.
messages: chloroplast

3702:AT2G29450
gene id: 3702:AT2G29450
uniprot id: A0A178VPP0
uniprot id: P46421
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: By auxin.
messages: In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB) and benzyl isothiocyanate (BITC). May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT5G58700
gene id: 3702:AT5G58700
uniprot id: A0A178UP87
uniprot id: B9DGG5
uniprot id: Q944C1
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By environmental stresses such as dehydration, salinity and low temperature.
messages: Cell membrane
messages: Low expression in leaves, roots, flowers and siliques. Expressed in pollen and in cells of the stigma surface.
messages: Membrane
messages: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
messages: cytosol

3702:AT4G35480
gene id: 3702:AT4G35480
uniprot id: Q9ZT49
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase that possess E3 ubiquitin ligase activity in vitro and mediates protein monoubiquitination (Ref.10). Triggers the monoubiquitination of phosphorylated BIK1 in response to pathogen-associated molecular pattern (PAMP) detection (Ref.10). May be involved in the early steps of the plant defense signaling pathway (Probable).
messages: Interacts with BIK1.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: Up-regulated by chitin.

3702:AT2G23800
gene id: 3702:AT2G23800
uniprot id: A0A384LH49
uniprot id: B6DVJ8
uniprot id: O04046
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Endoplasmic reticulum
messages: Heterodimeric geranyl(geranyl)-diphosphate (GPP) synthase large subunit. In vitro, the large subunit catalyzes mainly the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate while the small subunit alone is inactive. Upon association of the two subunits, the product profile is not changed.
messages: Mainly expressed in flowers.
messages: Monomer (By similarity). Part of a heterodimeric geranyl(geranyl)diphosphate synthase. Interacts with GGR.

3702:AT1G61140
gene id: 3702:AT1G61140
uniprot id: B3H7J3
uniprot id: F4HTG1
names: Similarity
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.

3702:AT2G22200
gene id: 3702:AT2G22200
uniprot id: Q9SIE4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G17845
gene id: 3702:AT2G17845
uniprot id: F4IPI3
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT2G30590
gene id: 3702:AT2G30590
uniprot id: O04336
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-d family.
messages: By salicylic acid.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT1G79530
gene id: 3702:AT1G79530
uniprot id: A0A654EVJ1
uniprot id: Q9SAJ6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
messages: Expressed in shoot and root vasculature, leaf veins and vascular tissue of flowers and siliques.
messages: Homotetramer.
messages: Involved in plastidial glycolytic pathway and plays a specific role in glycolytic energy production in non-green plastids and chloroplasts. Essential for breakdown of starch to form sucrose for export to non-photosynthetic tissues, and to generate primary metabolites for anabolic pathways such as fatty acid and amino acid synthesis. Plays an important role in plant development by providing substrates for the phosphorylated pathway of serine biosynthesis in roots. Plays a crucial role in pollen development. Functionally redundant with GAPCP2.
messages: No visible phenotype under normal growth conditions. Gapcp1 and gapcp2 double mutants have severe dwarf phenotypes with arrested root development and male sterility. Pollen grains show shrunken and collapsed forms and cannot germinate.
messages: Plants contain three types of GAPDH: NAD-dependent cytosolic forms which participate in glycolysis, NAD-dependent chloroplastic forms which participate in plastidic glycolysis and NADP-dependent chloroplastic forms which participate in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). All the forms are encoded by distinct genes.
messages: Repressed by darkness, but not by sucrose.
messages: chloroplast stroma

3702:AT4G17270
gene id: 3702:AT4G17270
uniprot id: A0A178UXK3
uniprot id: Q9M0M4
names: Similarity
messages: Belongs to the Mo25 family.

3702:AT1G31480
gene id: 3702:AT1G31480
uniprot id: Q8W5R2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abnormal amyloplast sedimentation and shoot gravitropism. Abnormal gravitropism in both inflorescence stems and hypocotyls accompanied by misshapen seeds and seedlings, including leaf movement in darkness. Reduced formation of vacuolar membrane 'bulbs'. The sgr2-1 mutant has no gravitropic response in inflorescence stems but a reduced gravitropic response in hypocotyls.
messages: Expressed in roots, hypocotyls, leaves, stems and floral buds, and, at low levels, in siliques.
messages: Expressed in young seedlings and progressively confined in the elongation zone of the root during seedlings growth.
messages: Forms oligomers.
messages: Involved in vacuolar formation or function (e.g. formation of vacuolar membrane 'bulbs'). Required for amyloplast sedimentation in the endodermis during shoot gravitropism, which are thus acting as statoliths. Particularly important for the negative gravitropism leading to leaf movement observed in darkness.
messages: Vacuole membrane

3702:AT4G26520
gene id: 3702:AT4G26520
uniprot id: A0A1P8B8Q8
uniprot id: A0A1P8B8S7
uniprot id: A0A654FT01
uniprot id: P22197
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: Down-regulated by cadmium (PubMed:16797112). Induced by glucose and sucrose (PubMed:22561114). Induced by drought stress (PubMed:22561114).
messages: Highly expressed in flowers, and at lower levels in rosettes leaves and cauline leaves.
messages: Homotetramer.
messages: Plays a key role in glycolysis and gluconeogenesis.
messages: S-glutathionylated at Cys-68 and Cys-173.
messages: S-nitrosylated at Cys-173.
messages: cytosol

3702:AT5G23160
gene id: 3702:AT5G23160
uniprot id: A0A178UMK5
uniprot id: Q9FMY4
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G24070
gene id: 3702:AT5G24070
uniprot id: A0A178USM8
uniprot id: Q9FLV5
names: Caution
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Lacks the distal histidine (here Ser-77), present in the active site, which is one of the conserved features of the classical plant (class III) peroxidase family.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (Probable). The enzyme activity has to be proved.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT5G12990
gene id: 3702:AT5G12990
uniprot id: Q9LXU0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Expressed in the entire embryo at the globular stage. Progressively restricted to the basal regions of the embryo that form the root meristem and the vasculature. After germination, detected in the differentiation zone of the stele that forms the inner layers of the root and in differentiating columella cells (CCs).
messages: Extracellular signal peptide secreted by differentiated root cells that regulates root cell fate. Acts with ACR4 as a ligand-receptor pair in a signal transduction pathway, coordinating movement of the root tip and organization of cell divisions in the root meristem. Promotes cell differentiation in the distal root meristem in a dose-dependent manner, especially the transition from columella stem cells (CSC) daughters into columella cells (CCs). Induces ACR4 expression in root quiescent center (QC). Involved in WUX5 QC-specific expression pattern regulation. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed at low levels in stems and apex, and, to a lower extent, in roots, seedlings, leaves, flowers, siliques and pollen.
messages: Short roots with irregularly shaped root tips and following a waving pattern. Delayed differentiation of columella stem cells (CSC) daughters into columella cells (CCs).
messages: extracellular space

3702:AT5G38860
gene id: 3702:AT5G38860
uniprot id: A0A1P8BB12
uniprot id: A0A654G651
uniprot id: Q9FMB6
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer (Probable). Interacts with the N-terminus of BZR2/BES1.
messages: Nucleus
messages: Positive brassinosteroid-signaling protein.

3702:AT3G48030
gene id: 3702:AT3G48030
uniprot id: Q7X843
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G35600
gene id: 3702:AT4G35600
uniprot id: A0A178UXN4
uniprot id: F4JN38
uniprot id: P27450
names: Caution
names: Function
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a spatial inhibitor of signaling that modulates abscission zone cell adhesion and expansion. Acts both directly and indirectly by physically interacting with RLK5/HAE and SOBIR1/EVR at the cell surface.
messages: Autophosphorylated on serine, threonine and tyrosine residues.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with SOBIR1/EVR and RLK5/HAE.
messages: Nucleus
messages: Sequencing errors.
messages: Was originally (PubMed:1851993) reported to be a connexin and to contain transmembrane domains. PubMed:8400879 authors have assigned that this is not a connexin, but rather a protein kinase.

3702:AT5G10600
gene id: 3702:AT5G10600
uniprot id: F4KI78
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G19370
gene id: 3702:AT5G19370
uniprot id: Q93WI0
names: Sequence Caution
names: Subcellular Location Annotation
messages: Sequencing errors.
messages: chloroplast

3702:AT5G40660
gene id: 3702:AT5G40660
uniprot id: A0A178U9M1
uniprot id: Q94BY8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATP12 family.
messages: Mitochondrion

3702:AT4G33770
gene id: 3702:AT4G33770
uniprot id: A0A178V2A8
uniprot id: A0A384KFJ1
uniprot id: A8MRH2
uniprot id: O81893
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ITPK1 family.
messages: Binds 2 magnesium ions per subunit.
messages: Distorted seed coat with reduced mucilage content and decreased suberin and cutin composition. Crumpled columellas.
messages: Expressed in seedling roots, cotyledons, rosette leaves, cauline leaves, stems, flowers, siliques and seeds.
messages: Expressed in the seed coat of developing seeds from 2 to 6 days after fertilization.
messages: Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3.
messages: Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. Phosphorylates Ins(3,4,5,6)P4 to form InsP5 (PubMed:17698066). This reaction is thought to have regulatory importance, since Ins(3,4,5,6)P4 is an inhibitor of plasma membrane Ca(2+)-activated Cl(-) channels, while Ins(1,3,4,5,6)P5 is not (By similarity). Also phosphorylates Ins(1,3,4)P3 or a racemic mixture of Ins(1,4,6)P3 and Ins(3,4,6)P3 to form InsP4 (PubMed:17698066). Ins(1,3,4,6)P4 is an essential molecule in the hexakisphosphate (InsP6) pathway (By similarity). Plays a role in seed coat development and lipid polyester barrier formation (PubMed:23595027).
messages: Monomer.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G23260
gene id: 3702:AT1G23260
uniprot id: Q93YP0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Detected in seedlings 6 hours and 2 days post-germination.
messages: Expressed in roots, shoots, leaves, stems and flowers, but not in pollen.
messages: Has no ubiquitin ligase activity on its own. The heterodimer with UBC catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. May play a role in the control of progress through the cell cycle and differentiation. Probably not involved in the error-free DNA repair.
messages: Heterodimer with UBC35 or UBC36.
messages: Plants do not display MMS sensitivity during seed germination.

3702:AT1G75130
gene id: 3702:AT1G75130
uniprot id: A0A178WDX2
uniprot id: Q9FRK4
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G32300
gene id: 3702:AT4G32300
uniprot id: A0A178URS3
uniprot id: Q8RWZ5
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Interacts with PUB9, PUB13, PUB14 and PUB29.
messages: Membrane

3702:AT1G17440
gene id: 3702:AT1G17440
uniprot id: A0A7G2DXG2
uniprot id: Q940A7
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAF12 family.
messages: Component of the TFIID complex. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa. Can homodimerize. Interacts with PP2A1, PP2A5, ERF1B, EIN3, TAF4, TAF4B, TAF5, TAF8, TAF10, TAF11, TAF12, TAF13, TAF14, TAF14B, TAF15 and TAF15B.
messages: Expressed in roots, leaves, stems, inflorescences and flowers.
messages: Not up-regulated by ethylene.
messages: Nucleus
messages: TAF12B in cv. Lansberg erecta (AC B2C6R6) is 2 amino acids shorter and has been shown to be involved in the negative regulation of cytokinin sensitivity.
messages: TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Required for the expression of a subset of ethylene-responsive genes. Probably involved in the negative regulation of cytokinin sensitivity.

3702:AT5G04047
gene id: 3702:AT5G04047
uniprot id: B3H5F7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G27000
gene id: 3702:AT5G27000
uniprot id: O81635
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: Flower specific.
messages: Microtubule-binding motor protein.
messages: Monomer.
messages: cytoskeleton

3702:AT3G56060
gene id: 3702:AT3G56060
uniprot id: A0A5S9XLF4
uniprot id: Q93ZK1
names: Similarity
messages: Belongs to the GMC oxidoreductase family.

3702:AT5G42130
gene id: 3702:AT5G42130
uniprot id: A0A178U9Z1
uniprot id: Q9FHX2
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Expressed in leaves, developing flowers and siliques.
messages: Membrane
messages: Probably involved in iron transport into chloroplasts.
messages: Reduced vegetative growth and reduced expression of ferritin.
messages: Up-regulated by iron excess.
messages: chloroplast inner membrane

3702:ArthCp050
gene id: 3702:ArthCp050
uniprot id: A0A1B1W4X1
uniprot id: P61839
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbT family.
messages: Found at the monomer-monomer interface of the photosystem II (PS II) dimer, plays a role in assembly and dimerization of PSII. PSII is a light-driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Seems to play a role in the dimerization of PSII.
messages: chloroplast thylakoid membrane

3702:AT1G30470
gene id: 3702:AT1G30470
uniprot id: A0A654EE40
uniprot id: F4I6B2
uniprot id: F4I6B3
uniprot id: F4I6B4
names: Similarity
messages: Belongs to the SAPS family.

3702:AT1G48240
gene id: 3702:AT1G48240
uniprot id: Q9LNH6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the novel plant SNARE family.
messages: Expressed in roots, stems, flower, siliques and leaves.
messages: Membrane
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT3G03776
gene id: 3702:AT3G03776
uniprot id: A0A384KCB3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G55050
gene id: 3702:AT5G55050
uniprot id: Q9FIA1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT5G20650
gene id: 3702:AT5G20650
uniprot id: A0A178UL13
uniprot id: Q93VM8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.
messages: Highly expressed in leaves and stems and at lower levels in roots and flowers.
messages: Involved in the transport of copper.
messages: Membrane
messages: No change in expression levels after treatment with high concentrations of copper.

3702:AT3G01080
gene id: 3702:AT3G01080
uniprot id: A0A1I9LLS8
uniprot id: A0A1I9LLS9
uniprot id: A0A5S9X831
uniprot id: Q93WU7
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT1G75220
gene id: 3702:AT1G75220
uniprot id: A0A5S9WUJ5
uniprot id: Q9FRL3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT3G09550
gene id: 3702:AT3G09550
uniprot id: A0A1I9LLR6
uniprot id: A0A384KPI6
uniprot id: F4J181
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G43340
gene id: 3702:AT5G43340
uniprot id: Q9ZWT3
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although related to the sugar transporter family, it does not transport sugars.
messages: Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.
messages: Expressed in anthers, tapetumand mature pollen and, to a lower extent, in hydathodes and vascular tissues of cotyledons of flowering plants.
messages: High-affinity transporter for external inorganic phosphate.
messages: Membrane

3702:AT5G62980
gene id: 3702:AT5G62980
uniprot id: A0A5S9YGG6
uniprot id: Q9FM54
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the DHNA family.
messages: Catalyzes the conversion of 7,8-dihydroneopterin into 6-hydroxymethyl-7,8-dihydropterin, a biosynthetic precursor of the vitamin tetrahydrofolate. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin.
messages: Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin.
messages: Expressed in roots, leaves, stems and siliques.
messages: Homooctamer. Forms a hollow cylinder assembled from two ring-shaped tetramers.

3702:AT3G06730
gene id: 3702:AT3G06730
uniprot id: Q9M7X9
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Albino seedlings leading to lethality. Abnormal plastids lacking internal membrane structures.
messages: Belongs to the thioredoxin family. Plant CITRX-type subfamily.
messages: Interacts with FLN1 and FLN2 (PubMed:20511297). Interacts with MRL7 (PubMed:23956074).
messages: May be due to intron retention.
messages: The article has been retracted, because it has become clear that the thioredoxin that interacts in yeast 2-hybrid with the Cf-9 C-terminus is in fact localized in the chloroplast, rendering a role in Cf-9 signaling unlikely. All the authors agree that this paper should be withdrawn from the scientific literature.
messages: Thiol-disulfide oxidoreductase that plays a role in proper chloroplast development, most likely through regulating plastid-encoded polymerase (PEP) dependent chloroplast transcription. Acts as a component of the transcriptionally active plastid chromosome that is required for plastid gene expression.
messages: chloroplast

3702:AT4G12550
gene id: 3702:AT4G12550
uniprot id: A0A654FNK4
uniprot id: Q9S7I2
names: Developmental Stage
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family. PEARLI1 subfamily.
messages: Expressed during auxin-induced lateral root formation.
messages: Induced between 4 and 8 hours after treatment with auxin and remains high for at least 24 hours.
messages: Secreted

3702:AT3G22510
gene id: 3702:AT3G22510
uniprot id: A0A384L1R9
uniprot id: Q6AWV8
names: Similarity
messages: Belongs to the TSR2 family.

3702:AT3G04090
gene id: 3702:AT3G04090
uniprot id: A0A178V5Y6
uniprot id: Q9M8W5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala/Thr (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. SIP (TC 1.A.8.10) subfamily.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots and above ground. Expressed in elongating regions of the root tips, trichome cells of the rosette leaves, vascular tissues of the flower petals, stigma, stamens (anthers and filaments), pollen and the top and bottom (receptacle) of siliques.
messages: Membrane
messages: Water channel required to facilitate the transport of water across cell membrane.

3702:AT2G22080
gene id: 3702:AT2G22080
uniprot id: A0A178VRB9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G20170
gene id: 3702:AT4G20170
uniprot id: A0A178UX31
uniprot id: O65431
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 92 family.
messages: Expressed in root caps, mature leaves, top of the stems and seeds.
messages: Golgi apparatus membrane
messages: Involved in the biosynthesis of beta-1,4-galactan. Beta-1,4-galactans are abundant polysaccharides in plant cell walls and are found as side-chain of rhamnogalacturonan I, which is a major component of pectin.
messages: No visible phenotype under normal growth conditions, but mutant plants have reduced content of beta-1,4-galactan in leaf cell wall.

3702:AT2G18760
gene id: 3702:AT2G18760
uniprot id: A0A178VUI7
uniprot id: Q9ZV43
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates after genotoxic agents treatment such as bleomycin (BLM), a small peptide that create DNA double strand breaks (DSBs).
messages: Belongs to the SNF2/RAD54 helicase family.
messages: Essential factor involved in transcription-coupled nucleotide excision repair (TCR) which allows RNA polymerase II-blocking lesions to be rapidly removed from the transcribed strand of active genes. Upon DNA-binding, it locally modifies DNA conformation by wrapping the DNA around itself, thereby modifying the interface between stalled RNA polymerase II and DNA. It is required for transcription-coupled repair complex formation.
messages: Homodimer. Binds DNA.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G27410
gene id: 3702:AT2G27410
uniprot id: Q9XIP5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G49270
gene id: 3702:AT5G49270
uniprot id: A0A384L0N7
uniprot id: Q0WRJ1
uniprot id: Q9FJ13
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the COBRA family.
messages: Cell membrane
messages: Expressed only in flowers.

3702:AT2G20725
gene id: 3702:AT2G20725
uniprot id: A0A178VTV5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G26420
gene id: 3702:AT2G26420
uniprot id: O48709
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Basal shift of ARAC3/ROP6 and ARAC4/ROP2 positioning and broad lateral localization of D6PK in root hair-forming cells leading to basal shift of root hair positions.
messages: Cell membrane
messages: With DRP1A and DRP2B, required for the precise coordination of polar ARAC3/ROP6 and ARAC4/ROP2 placement and subsequent root hair positioning during planar polarity formation in root hair-forming cells, probably by mediating the correct basal-to-planar polarity switching of D6PK into the polar, lipid-enriched domain.

3702:AT2G29540
gene id: 3702:AT2G29540
uniprot id: A8MRK9
uniprot id: Q42483
names: Similarity
messages: Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA polymerase subunit family.

3702:AT2G28490
gene id: 3702:AT2G28490
uniprot id: Q9SK09
names: Function
names: Similarity
messages: Belongs to the 7S seed storage protein family.
messages: Seed storage protein.

3702:AT4G34790
gene id: 3702:AT4G34790
uniprot id: A0A178V7U4
uniprot id: Q9SW55
names: Similarity
messages: Belongs to the ARG7 family.

3702:ArthCp066
gene id: 3702:ArthCp066
uniprot id: A0A1B1W513
uniprot id: P56786
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf2 family.
messages: Probable ATPase of unknown function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.
messages: chloroplast stroma

3702:AT2G47410
gene id: 3702:AT2G47410
uniprot id: A0A384KA14
uniprot id: A0A384L4J4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G42410
gene id: 3702:AT5G42410
uniprot id: A0A178UJY6
uniprot id: Q9FIH6
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT3G07530
gene id: 3702:AT3G07530
uniprot id: A0A1I9LM20
uniprot id: A0A1I9LM21
uniprot id: A0A1I9LM22
uniprot id: A0A1I9LM23
uniprot id: A0A5S9XA05
uniprot id: A0A7G2EGM8
uniprot id: F4JEH2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G79740
gene id: 3702:AT1G79740
uniprot id: F4HQA2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G28815
gene id: 3702:AT2G28815
uniprot id: A0A654EYL5
uniprot id: Q84WZ8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Could be a component of the large subunit of mitochondrial ribosome.
messages: Could be the product of a pseudogene.
messages: Mitochondrion

3702:AT1G06840
gene id: 3702:AT1G06840
uniprot id: A0A178W3Y7
uniprot id: C0LGD7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT3G22160
gene id: 3702:AT3G22160
uniprot id: Q9LIE6
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: May function as positive regulator of plant growth.
messages: Nucleus
messages: Plants over-expressing VQ22 show stunted growth phenotype.

3702:AT4G25560
gene id: 3702:AT4G25560
uniprot id: Q9M0K4
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds to FHY1 and FHL (PubMed:19482971). Interacts with COP1.
messages: By hormones or elicitors treatment. By exposure to abiotic stress.
messages: Expressed at very low level. Expressed in cauline leaves.
messages: Nucleus speckle
messages: Partially blind to far-red (FR). Impaired inhibition of hypocotyl elongation and cotyledons expansion under continuous FR light conditions.
messages: Transcription factor that promotes photomorphogenesis in the light by participating in the transmission of phytochrome A (phyA) signals to downstream responses (PubMed:11581165, PubMed:19482971). Probably acts by activating expression of light-induced genes. In darkness, its degradation prevents the activation of light-induced genes (PubMed:11581165).
messages: Ubiquitinated by COP1. Ubiquitination takes place in darkness and leads to its subsequent degradation, thereby preventing to activate photomorphogenesis signals. Ubiquitination is stimulated by SPA1.

3702:AT1G59790
gene id: 3702:AT1G59790
uniprot id: A0A1P8AP96
uniprot id: A0A654EL75
uniprot id: Q9XIE9
names: Similarity
messages: Belongs to the cullin family.

3702:AT1G66420
gene id: 3702:AT1G66420
uniprot id: Q9C517
names: Similarity
messages: Belongs to the GeBP family.

3702:AT4G35520
gene id: 3702:AT4G35520
uniprot id: A0A1P8B429
uniprot id: A0A1P8B434
uniprot id: A0A1P8B439
uniprot id: A0A1P8B445
uniprot id: A0A1P8B465
uniprot id: F4JN26
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DNA mismatch repair MutL/HexB family.
messages: Expressed during prophase I of meiosis.
messages: Expressed in reproductive tissues.
messages: Heterodimer of MLH1 and MLH3, called MutLbeta, which is involved in correction of a specific subset of IDLs when associated with MutSbeta.
messages: Involved in DNA mismatch repair (MMR), correcting insertion-deletion loops (IDLs) resulting from DNA replication, DNA damage or from recombination events between non-identical sequences during meiosis. Component of the MutLbeta heterodimer, which probably forms a ternary complex with the MutSbeta heterodimer that initially recognizes the DNA mismatches. This complex is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis. Plays a major role in promoting meiotic crossing-over and is involved in maintaining the genetic stability of simple sequence repeats by correction of frameshift intermediates.
messages: Nucleus
messages: Reduced fertility and meiotic defects: 60 per cent reduction in crossovers and delayed prophase I progression.

3702:AT1G30400
gene id: 3702:AT1G30400
uniprot id: A0A178WBV0
uniprot id: Q9C8G9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: Interacts with calmodulin (CaM), PAS1 and FKBP42/TWD1.
messages: Membrane
messages: Pump for glutathione S-conjugates. Mediates the transport of S-(2,4-dinitrophenyl)-glutathione (DNP-GS), GSSG, cyanidin 3-glucoside-GS (C3G-GS) and metolachlor-GS (MOC-GS).
messages: Slightly induced by benoxacor, cloquintocet, fenchlorazol and fluorazol.
messages: Ubiquitous, with higher levels in leaves and stems and lower levels in roots. Localized in the root apex, root hair tips and root epidermis.
messages: Vacuole membrane

3702:AT3G11397
gene id: 3702:AT3G11397
uniprot id: A0A5S9XB20
uniprot id: Q8W115
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRA1 family.
messages: Endosome membrane
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane

3702:AT5G35080
gene id: 3702:AT5G35080
uniprot id: Q8GWH3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OS-9 family.
messages: Endoplasmic reticulum
messages: Interacts with HRD3A.
messages: Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation. Targets the misfolded LRR receptor kinase BRI1 and the misfolded receptor-like kinase EFR.
messages: No visible phenotype under normal growth conditions, but mutant plants have enhanced sensitivity to salt stress.

3702:AT2G24530
gene id: 3702:AT2G24530
uniprot id: A0A384KC14
uniprot id: Q58G10
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G25770
gene id: 3702:AT5G25770
uniprot id: A0A178UEC4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G47420
gene id: 3702:AT1G47420
uniprot id: Q9SX77
names: Subcellular Location Annotation
names: Subunit
messages: Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.
messages: Mitochondrion inner membrane

3702:AT2G36780
gene id: 3702:AT2G36780
uniprot id: A0A5S9X4R7
uniprot id: Q9ZQ96
uniprot id: W8PUY4
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G01680
gene id: 3702:AT1G01680
uniprot id: A0A178WFK8
uniprot id: Q9LQ92
names: Caution
names: Function
messages: Functions as an E3 ubiquitin ligase.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G57940
gene id: 3702:AT3G57940
uniprot id: F4J4L4
uniprot id: Q9M2Q4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNA cytidine acetyltransferase family. NAT10 subfamily.
messages: RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
messages: nucleolus

3702:AT1G34245
gene id: 3702:AT1G34245
uniprot id: A0A178W2V8
uniprot id: Q8LC53
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Controls stomatal patterning.
messages: Controls stomatal patterning. Regulates the number of cells that enter, and remain in, the stomatal lineage by inhibiting protodermal cells from adopting the meristemoid mother cell (MMC) fate in a non-cell-autonomous manner. Mediates stomatal development inhibition. MEPF2: mobile signal controlling stomatal development in a non-cell-autonomous manner (PubMed:22241782). Uses ERECTA as major receptor (PubMed:22241782). Inactivated by cleavage by CRSP (AC Q9LNU1) (PubMed:25043023). May act by competing with somatogen (AC Q9SV72) for the same receptor, TMM (AC Q9SSD1) (PubMed:22027592).
messages: Expressed in leaves, especially by the MMCs and their early descendants cells (stomatal lineage cells) including guard mother cells (GMCs).
messages: Increased small pavement cell (non-stomatal) and stomatal cell density. Inversion in CO(2) control of stomatal development resulting in an increased number of stomata at elevated CO(2) concentration.
messages: Induced by high CO(2).
messages: Interacts with ERECTA, ERL1 and TMM.
messages: Secreted
messages: The loop (92-105) connecting the two anti-parallel beta-strands (85-91 and 106-112) confers the function to the peptide.

3702:AT2G27550
gene id: 3702:AT2G27550
uniprot id: A0A178VQ05
uniprot id: Q9ZNV5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phosphatidylethanolamine-binding protein family.
messages: Cytoplasm
messages: Expressed in tissues surrounding vascular bundles in hypocotyl of 2-week-old plants.
messages: May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity). Can substitute for TERMINAL FLOWER 1 (in vitro).
messages: Plants do not show a phenotype similar to those of TERMINAL FLOWER 1 mutants.

3702:AT1G79630
gene id: 3702:AT1G79630
uniprot id: Q8RXZ4
names: Cofactor
names: Sequence Caution
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Sequencing errors.

3702:AT4G22880
gene id: 3702:AT4G22880
uniprot id: A0A7G2F072
uniprot id: Q0WWD6
uniprot id: Q96323
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Binds 1 ascorbate molecule per subunit.
messages: By methyl jasmonate, 6-benzylaminopurine, light and sucrose.
messages: Expressed in young seedlings (at protein level).
messages: Involved in anthocyanin and protoanthocyanidin biosynthesis by catalyzing the oxidation of leucoanthocyanidins into anthocyanidins. Possesses low flavonol synthase activity in vitro towards dihydrokaempferol and dihydroquercetin producing kaempferol and quercitin, respectively.
messages: No accumulation of anthocyanins, accumulation of protoanthocyanidin intermediates and presence of numerous small vacuoles in leaf epidermal cells.

3702:AT2G42430
gene id: 3702:AT2G42430
uniprot id: Q9SLB7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: By auxin.
messages: During lateral root formation, expressed in the lateral root primordia, and the developing, emerged, and mature lateral roots.
messages: Expressed in roots and faintly in shoots.
messages: Homodimer and heterodimer with LBD18.
messages: Nucleus
messages: Reduced number of lateral roots.
messages: Transcriptional activator (PubMed:19717544, PubMed:22974309). Involved in lateral root formation. Regulated by the transcriptional activators ARF7 and ARF19 (PubMed:17259263). Functions in the initiation and emergence of lateral roots, in conjunction with LBD18, downstream of ARF7 and ARF19 (PubMed:19717544, PubMed:23749813). Acts downstream of the auxin influx carriers AUX1 and LAX1 in the regulation of lateral root initiation and development (PubMed:26059335).

3702:AT2G36970
gene id: 3702:AT2G36970
uniprot id: Q9SJL0
uniprot id: W8Q6X6
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT3G23340
gene id: 3702:AT3G23340
uniprot id: A0A178VL59
uniprot id: Q9LW62
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CK1 Ser/Thr protein kinase family. Casein kinase I subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins.
messages: Cytoplasm
messages: Monomer.
messages: plasmodesma

3702:AT4G04025
gene id: 3702:AT4G04025
uniprot id: A0A1P8B3X9
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT1G01020
gene id: 3702:AT1G01020
uniprot id: A0A1P8ARY9
uniprot id: A0A1P8AS22
uniprot id: F4HQG4
uniprot id: Q5MK24
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARV1 family.
messages: Endoplasmic reticulum membrane
messages: In floral tissues, expressed in pollen grains and fertilized ovules until they develop into seeds, and, at low levels, in the styles. Observed in germinating seedlings, and later confined to shoot and root apical meristems. Accumulates in emerging leaves and in the vascular tissue of adult leaves.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mediator of sterol homeostasis involved in sterol uptake, trafficking and distribution into membranes.
messages: Mediator of sterol homeostasis involved in sterol uptake, trafficking and distribution into membranes. Regulates also the sphingolipid metabolism.
messages: Membrane
messages: Regulates also the sphingolipid metabolism.
messages: Restricted to tissues in which cells are actively dividing or expanding. Mostly expressed in roots and flowers, and, to a lower extent, in stems and leaves.

3702:AT1G71680
gene id: 3702:AT1G71680
uniprot id: A0A178WMN6
uniprot id: Q9C9J0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Amino acid transporter.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G18690
gene id: 3702:AT3G18690
uniprot id: Q8LGD5
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with MPK4, WRKY25 and WRKY33.
messages: Nucleus
messages: Phosphorylated on serine residue by MPK4.
messages: Regulator of plant defense response. May contribute to MPK4-regulated defense activation by coupling the kinase to specific WRKY transcription factors.

3702:AT4G34090
gene id: 3702:AT4G34090
uniprot id: Q94JY0
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with ATPC1.
messages: Involved in the assembly of the F(1) ATP synthase in chloroplast thylakoid membranes (PubMed:25775508). Functions downstream of the CPN60 chaperones to promote assembly of the catalytically active core of the chloroplast ATP synthase (PubMed:25775508). Assists the assembly of the ATP synthase gamma subunit into the active F(1) core downstream of CPN60-mediated folding, which is critical for the biogenesis of the chloroplast ATP synthase (PubMed:25775508).
messages: Severe growth defects, and inability to flower and produce seeds.
messages: chloroplast stroma

3702:AT5G49690
gene id: 3702:AT5G49690
uniprot id: Q9LTA3
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT2G16230
gene id: 3702:AT2G16230
uniprot id: A0A5S9WYQ3
uniprot id: F4IKB3
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT2G32940
gene id: 3702:AT2G32940
uniprot id: A0A654EZS0
uniprot id: O48771
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the argonaute family. Ago subfamily.
messages: Expressed in roots, cotyledons and shoot meristematic region.
messages: Involved in transcriptional gene silencing (TGS). Component of the RISC complex that associate with the small interfering RNA (siRNA) pathway involved in direct cytosine methylation at endogenous DNA repeats. Required for the accumulation of specific siRNAs derived from transgene and heterochromatin-related endogenous loci. Involved in RNA-directed DNA methylation (RdDM) at specific endogenous loci. Probably not required for the accumulation of siRNAs derived from transgene inverted repeats that induce post-transcriptional gene silencing (PTGS). Associates mainly with small RNAs of 24 nucleotide in length and preferentially recruits small RNAs with a 5' terminal adenosine. Targeted by turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO6 function in RNA silencing.
messages: Nucleus

3702:AT5G46040
gene id: 3702:AT5G46040
uniprot id: Q9FNL8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in roots and siliques.
messages: Membrane
messages: Peptide transporter.

3702:AT4G26140
gene id: 3702:AT4G26140
uniprot id: A0A1P8B827
uniprot id: A0A1P8B828
uniprot id: A0A1P8B829
uniprot id: A0A1P8B834
uniprot id: A0A1P8B849
uniprot id: A0A654FSX5
uniprot id: Q9SCV0
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: May be due to a competing acceptor splice site and to an intron retention.
messages: Ubiquitous, with higher expression levels in roots and siliques.
messages: apoplast

3702:AT4G30250
gene id: 3702:AT4G30250
uniprot id: A0A1P8B3B9
uniprot id: F4JPK8
names: Similarity
messages: Belongs to the AAA ATPase family. BCS1 subfamily.

3702:AT5G58710
gene id: 3702:AT5G58710
uniprot id: A0A178UBF4
uniprot id: Q9SP02
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Binds cyclosporin A (CsA). CsA mediates some of its effects via an inhibitory action on PPIase (By similarity).
messages: Endoplasmic reticulum
messages: Interacts with the PP2A A subunit PP2AA1/RCN1.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Seems to be involved in root development.
messages: Secreted
messages: Ubiquitous, mostly in aerial organs. Higher levels in leaf and buds, and lower levels in seedlings.

3702:AT2G37500
gene id: 3702:AT2G37500
uniprot id: A0A178VUS6
uniprot id: Q9ZUR7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ArgJ family.
messages: Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
messages: Heterodimer of an alpha and a beta chain.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G63460
gene id: 3702:AT1G63460
uniprot id: A0A654EL21
uniprot id: Q0WTE6
uniprot id: Q8LBU2
names: Function
names: Similarity
messages: Belongs to the glutathione peroxidase family.
messages: May constitute a glutathione peroxidase-like protective system against oxidative stresses.

3702:AT4G08390
gene id: 3702:AT4G08390
uniprot id: F4JFY4
uniprot id: F4JFY5
uniprot id: Q42592
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds one cation per subunit; probably K(+), but might also be Ca(2+).
messages: Mitochondrion
messages: Plays a key role in hydrogen peroxide removal.
messages: chloroplast stroma

3702:AT4G16710
gene id: 3702:AT4G16710
uniprot id: A0A654FPZ3
uniprot id: O23514
names: Similarity
messages: Belongs to the glycosyltransferase 28 family.

3702:AT2G30670
gene id: 3702:AT2G30670
uniprot id: O49332
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.

3702:AT1G18090
gene id: 3702:AT1G18090
uniprot id: A0A178W174
uniprot id: A0A5S9V119
uniprot id: F4IAM4
uniprot id: Q94A33
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 5'->3' double-stranded DNA exonuclease which may also possess a cryptic 3'->5' double-stranded DNA exonuclease activity. Functions in DNA mismatch repair.
messages: Belongs to the XPG/RAD2 endonuclease family. EXO1 subfamily.
messages: Binds 2 magnesium ions per subunit. They probably participate in the reaction catalyzed by the enzyme. May bind an additional third magnesium ion after substrate binding.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:ArthCp002
gene id: 3702:ArthCp002
uniprot id: A0A1B1W4S7
uniprot id: A0A7G2FL73
uniprot id: P83755
names: Cofactor
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: C-terminally processed by CTPA; processing is essential to allow assembly of the oxygen-evolving complex and thus photosynthetic growth.
messages: C-terminally processed by CtpA; processing is essential to allow assembly of the oxygen-evolving complex and thus photosynthetic growth.
messages: Herbicides such as atrazine, BNT, diuron or ioxynil bind in the Q(B) binding site and block subsequent electron transfer.
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes (By similarity). Interacts with PAM68 (PubMed:20923938). The nascent chain still attached to the ribosome interacts with FFC/ cpSRP54, but not with CAO/cpSRP43 or SecA (PubMed:9927433).
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Phosphorylation occurs in normal plant growth light conditions. Rapid dephosphorylation occurs during heat shock.
messages: Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
messages: The D1/D2 heterodimer binds P680, chlorophylls that are the primary electron donor of PSII, and subsequent electron acceptors. It shares a non-heme iron and each subunit binds pheophytin, quinone, additional chlorophylls, carotenoids and lipids. D1 provides most of the ligands for the Mn4-Ca-O5 cluster of the oxygen-evolving complex (OEC). There is also a Cl(-1) ion associated with D1 and D2, which is required for oxygen evolution. The PSII complex binds additional chlorophylls, carotenoids and specific lipids.
messages: Tyr-161 forms a radical intermediate that is referred to as redox-active TyrZ, YZ or Y-Z.
messages: chloroplast thylakoid membrane

3702:AT1G62120
gene id: 3702:AT1G62120
uniprot id: A0A5S9WRD4
uniprot id: Q6DBE5
names: Similarity
messages: Belongs to the mTERF family.

3702:AT1G14110
gene id: 3702:AT1G14110
uniprot id: Q9XI77
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 37 family.
messages: Expressed in leaves and stems.
messages: Golgi stack membrane
messages: May be involved in cell wall biosynthesis. May act as a fucosyltransferase.

3702:AT2G42830
gene id: 3702:AT2G42830
uniprot id: A0A654F6K9
uniprot id: P29385
uniprot id: Q5XXG9
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with AGL15 and AGL16.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Probable transcription factor. Interacts genetically with TT16/AGL32 in a partially antagonistic manner during flower development. Is essential for the coordination of cell divisions in ovule, seed coat development and endosperm formation (PubMed:27776173).

3702:AT2G36640
gene id: 3702:AT2G36640
uniprot id: A0A1P8B189
uniprot id: Q9SKP0
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the LEA type 4 family.
messages: By abscisic acid (ABA) in immature siliques.
messages: Expressed during somatic embryogenesis.
messages: Expressed in mature seeds.
messages: May be involved in the BHLH109-mediated regulation of somatic embryogenesis.

3702:AT2G05900
gene id: 3702:AT2G05900
uniprot id: Q3EC60
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Although both SET and pre-SET domains are present, the absence of the post-SET domain may alter the methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Histone methyltransferase family member that may lack methyltransferase activity. May methylate 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression (Potential).
messages: Nucleus
messages: The S-adenosyl-L-methionine binding sites are not conserved, suggesting that this protein lacks methyltransferase activity. Likewise, the zinc-binding Cys residues in the pre-SET domain are only partially conserved.
messages: centromere

3702:AT3G54710
gene id: 3702:AT3G54710
uniprot id: Q9M1S9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Cdt1 family.
messages: Expressed in proliferating (e.g. shoot and root apical meristems, organ primordia, guard cells and stomatal lineage) and endoreplicating cells (e.g. developing trichomes).
messages: Member of the pre-replication complex. Regulates endoreduplication. Involved in the coordination of cell and plastid division.
messages: Nucleus
messages: Repressed by ABAP1.

3702:AT4G20325
gene id: 3702:AT4G20325
uniprot id: A8MRG8
uniprot id: B6EUC5
names: Function
names: Subcellular Location Annotation
messages: Non catalytic subunit of RNase H2, an endonuclease that specifically degrades the RNA of RNA:DNA hybrids. Participates in DNA replication, possibly by mediating the removal of lagging-strand Okazaki fragment RNA primers during DNA replication. Mediates the excision of single ribonucleotides from DNA:RNA duplexes.
messages: Nucleus

3702:AT5G09350
gene id: 3702:AT5G09350
uniprot id: Q0WPX9
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts on phosphatidylinositol (PtdIns) in the first committed step in the production of the second messenger inositol-1,4,5-trisphosphate (By similarity). Necessary for proper organization of the trans-Golgi network (TGN) and post-Golgi secretion in root hairs. Together with PI4KB1, required during polarized root hair expansion and pollen tube elongation. Functions redundantly with PI4KB1 upstream of the cold response phosphoinositide-dependent phospholipase C (PI-PLC) pathway.
messages: Belongs to the PI3/PI4-kinase family. Type III PI4K subfamily.
messages: Cell membrane
messages: Cytoplasmic vesicle membrane
messages: The PPC (Plant PI4K Charged) region is involved in membrane targeting and phospholipid binding.
messages: When associated with PI4KB1 disruption: aberrant root hair morphologies, and short and wavy pollen tubes.
messages: trans-Golgi network

3702:AT1G29720
gene id: 3702:AT1G29720
uniprot id: Q9ASQ6
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: May be due to an intron retention.

3702:AT5G46070
gene id: 3702:AT5G46070
uniprot id: A0A178U9S9
uniprot id: F4KG14
names: Similarity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3 GTPase family.

3702:AT1G64010
gene id: 3702:AT1G64010
uniprot id: A0A1P8ANB3
uniprot id: A0A5S9WS95
uniprot id: A0A654EKU3
uniprot id: Q4PSX9
names: Similarity
messages: Belongs to the serpin family.

3702:AT2G22840
gene id: 3702:AT2G22840
uniprot id: O81001
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRF family.
messages: Expressed during the early stages of leaf development and expression decreases with the maturation of the leaf.
messages: Interacts with GIF1 and GIF2.
messages: Nucleus
messages: Overexpression mutant display larger leaves and cotyledons, as well as a delayed bolting of the inflorescence stem when compared to wild-type plants.
messages: Strongly expressed in actively growing and developing tissues, such as roots, upper stems, and shoot tips containing the shoot apical meristem (SAM) and flower buds. Also expressed in mature flowers, but weakly expressed in mature stems and leaves.
messages: The QLQ domain and WRC domain may be involved in protein-protein interaction and DNA-binding, respectively.
messages: Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation. microRNA396-GRF1/GRF3 regulatory module acts as a developmental regulator in the reprogramming of root cells during cyst nematode infection, leading to the formation of the syncytium.
messages: microRNA 396 (miR396a or miR396b) negatively regulates growth-regulating factors (GRF1-4 and GRF7-9). Up-regulated in response to cyst nematode infection.

3702:AT1G60130
gene id: 3702:AT1G60130
uniprot id: A0A1P8ANS2
uniprot id: O80737
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT1G70580
gene id: 3702:AT1G70580
uniprot id: A0A178WFM8
uniprot id: Q9S7E9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. Alanine aminotransferase subfamily.
messages: Catalyzes the Glu:glyoxylate aminotransferase (GGT), Ala:glyoxylate aminotransferase (AGT), Ala:2-oxoglutarate aminotransferase (AKT) and Glu:pyruvate aminotransferase (GPT) reactions in peroxisomes.
messages: Expressed at low levels in seedlings, leaves, flowers, roots, and green siliques.
messages: Homodimer.
messages: Peroxisome
messages: The N-terminus is blocked.

3702:AT1G73270
gene id: 3702:AT1G73270
uniprot id: Q9CAU0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings and roots.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT5G50770
gene id: 3702:AT5G50770
uniprot id: Q9LUE4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Membrane

3702:AT5G10790
gene id: 3702:AT5G10790
uniprot id: A0A178UPE9
uniprot id: A0A1P8BG54
uniprot id: Q9LEW0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase C19 family.
messages: Component of a deubiquitination module (DUB module) formed by ENY2, SGF11, and UBP22 in Arabidopsis (PubMed:29588169, PubMed:30192741). Interacts directly with SGF11, but not with ENY2 (PubMed:29588169, PubMed:30192741).
messages: Component of a deubiquitination module (DUB module) that specifically deubiquinates monoubiquinated histone H2B (H2Bub) (PubMed:29588169, PubMed:30192741). Does not seem to be a component of the TREX-2 complex (PubMed:29588169). Seems to act independently of the SAGA multiprotein complex (PubMed:30192741). The DUB module is responsible for the major H2Bub deubiquitinase activity in Arabidopsis (PubMed:30192741).
messages: nucleoplasm

3702:AT3G48000
gene id: 3702:AT3G48000
uniprot id: Q9SU63
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the aldehyde dehydrogenase family.
messages: Homotetramer.
messages: Mitochondrion matrix
messages: Possesses activity on acetaldehyde and glycolaldehyde in vitro.

3702:AT5G61330
gene id: 3702:AT5G61330
uniprot id: A0A1P8BD18
uniprot id: A0A654GD02
uniprot id: Q9FLK0
names: Similarity
messages: Belongs to the AATF family.

3702:AT3G56740
gene id: 3702:AT3G56740
uniprot id: Q9LET3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane
messages: Might be an inactive rhomboid-type serine protease due to mismatches with the consensus active sites.
messages: Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis.

3702:AT1G35560
gene id: 3702:AT1G35560
uniprot id: Q9LQF0
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with SPL.
messages: Nucleus

3702:AT1G77460
gene id: 3702:AT1G77460
uniprot id: F4I718
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Associates with cellulase synthase (CESA) complexes (PubMed:24368796). Binds to cortical microtubules (By similarity). Interacts with CESA3 and CESA6 (PubMed:24368796).
messages: Cell membrane
messages: Endomembrane system
messages: Expressed in dark-grown hypocotyls, leaves (confined to vasculature and trichomes), stamen, pollen, developing siliques, and roots. Restricted in meristematic tissue of the shoot and root. Present in distinct punctae at the cell cortex, called microtubule-associated cellulose synthase compartments, that move with constant velocities of 10 to 3000 nm/min.
messages: No visible phenotype. The csi1 csi3 double mutants shows an enhanced cell expansion defect compared to csi1 as well as an additive reduction of cellulase synthase (CESA) complexes (CSCs) velocities.
messages: Regulator of the microtubular cytoskeleton (By similarity). Microtubule-associated protein involved in the association of cellulase synthase (CESA) complexes (CSCs) and cortical microtubules. Promotes dynamics of CSCs in the plasma membrane in both microtubules-dependent and microtubules-independent manners. Regulates primary cell wall biosynthesis and cellulose microfibrils organization (PubMed:24368796).
messages: cytoskeleton

3702:AT2G36100
gene id: 3702:AT2G36100
uniprot id: A0A178VVX3
uniprot id: Q9SIH4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Disorganised deposition of Casparian strips.
messages: Homodimer and heterodimers with other CASP proteins. Interacts with CASP2, CASP3, CASP4 and CASP5.
messages: Homodimer and heterodimers.
messages: Membrane
messages: Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

3702:AT5G11050
gene id: 3702:AT5G11050
uniprot id: Q9FY60
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: During female gametogenesis, expressed in the female gametophyte at stage FG4 (four-nucleate stage) in all four nuclei. Expressed in the central cell in unfused polar nuclei at stage FG5 and secondary nucleus at stage FG6. Expressed in the egg cell nucleus during stages FG5 and FG6. Expressed very weakly in mature female gametophytes (stage FG7).
messages: Expressed in ovary septum.
messages: No visible phenotype under normal growth conditions, but in the double mutant plants myb64 and myb119 the female gametophytes fail to cellularize, resulting in enlarged coenocytes with supernumerary nuclei.
messages: Nucleus
messages: The gain-of-function mutant upd10-D (T-DNA tagging) is infertile.
messages: Transcription factor required for female gametophyte fertility (PubMed:23057675, PubMed:24068955). Acts redundantly with MYB119 to initiate the FG5 transition during female gametophyte development. The FG5 transition represents the switch between free nuclear divisions and cellularization-differentiation in female gametophyte, and occurs during developmental stage FG5 (PubMed:24068955).

3702:AT1G03940
gene id: 3702:AT1G03940
uniprot id: Q9ZWB4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant acyltransferase family.
messages: Highly expressed in flowers, leaves and roots. Lower levels of expression in stems and siliques.
messages: Involved in the acylation of the 6'' position of the 3-O-glucose residue of anthocyanin. Also able to use flavonol 3-glucosides as the acyl acceptor.
messages: No visible phenotype, probably due to the redundancy with 3AT2.
messages: Up-regulated by high sucrose and by low phosphate stresses.

3702:AT4G26430
gene id: 3702:AT4G26430
uniprot id: A0A178V1W2
uniprot id: Q8W1P0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Although strongly related to metalloprotease proteins, it lacks the JAMM motif that probably constitutes the catalytic center. Its function as protease is therefore unsure.
messages: Belongs to the peptidase M67A family. CSN6 subfamily.
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Essential for the structural integrity of the CSN holocomplex (PubMed:17307927).
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8. Interacts with itself. In the complex, it probably interacts directly with CSN4, CSN5A or CSN5B, and CSN7. Binds to the translation initiation factors TIF3E1 (PubMed:19704582).
messages: Cytoplasm
messages: No visible phenotype when grown under normal conditions, due to the redundancy with CSN6A. Csn6a and csn6b double mutants are lethal at the seedling stage.
messages: Nucleus

3702:AT5G53350
gene id: 3702:AT5G53350
uniprot id: Q9FK07
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: ATP-dependent specificity component of the mitochondrial Clp protease (PubMed:11352464). It directs the protease to specific substrates (By similarity). Can perform chaperone functions in the absence of ClpP (By similarity).
messages: Belongs to the ClpX chaperone family.
messages: Constitutively expressed in leaves, shoots, roots and flowers.
messages: Mitochondrion

3702:AT1G73540
gene id: 3702:AT1G73540
uniprot id: A0A178W6P3
uniprot id: Q8VY81
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: No visible phenotype under normal growth conditions.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.
messages: chloroplast

3702:AT4G12400
gene id: 3702:AT4G12400
uniprot id: Q9STH1
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Acetylated.
messages: Co-chaperone that forms a complex with HSP70 and HSP90 and preproteins (e.g. chloroplast preproteins) (By similarity).
messages: Cytoplasm
messages: Decreased thermotolerance after a long recovery (2 days) under nonstress conditions following an acclimation heat treatment.
messages: Mediates the association of the molecular chaperones HSP70 and HSP90. Mediates nuclear encoded chloroplast preproteins binding to HSP90 prior to chloroplastic sorting (By similarity). Involved in acclimation to heat.
messages: Nucleus
messages: Phosphorylated.
messages: The tetratricopeptide repeat (TPR) domain, forming a carboxylate clamp (CC), mediates interaction with the highly conserved 'EEVD' motif at the C-terminal ends of HSP90 and HSP70.

3702:AT2G40935
gene id: 3702:AT2G40935
uniprot id: A0A178VWJ5
uniprot id: Q8S8T8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in cadmium resistance.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G05030
gene id: 3702:AT1G05030
uniprot id: A0A1P8ANF6
uniprot id: A0A5S9SN85
uniprot id: Q0WVE9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: May be involved in the efflux of glucose towards the cytosol.
messages: Membrane
messages: chloroplast membrane

3702:AT5G11410
gene id: 3702:AT5G11410
uniprot id: Q9LFL6
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Component of an immune signaling complex made of, at least, SZE1, BKN2/SZE2, ZAR1 and ZED1 (PubMed:30947022). Interacts directly with ZAR1 and Pseudomonas syringae HOPZ1A at the plasma membrane (PubMed:30947022).
messages: Expressed in stigma and ovaries in flowers, and in stems and seedlings.
messages: In inflorescences, first observed in flower abscission zones and stems (PubMed:31829135). In seedlings, present at the leaf edges and petioles (PubMed:31829135).
messages: N-terminal myristoylation is critical for plasma membrane localization and implication in defense responses.
messages: No visible phenotype (PubMed:31829135). Slight hydration defects of wild-type pollen placed on the stigma (PubMed:31829135). Slight hydration defects of wild-type pollen placed on the stigma of plants lacking both BKN1 and BKN2, but normal pollen grain adhesion and pollen tube growth (PubMed:31829135). Partial suppression of the pleiotropic phenotypes conferred by the dominant mutation zed1-D (e.g. high-temperature-dependent growth retardation and autoimmunity) (PubMed:30947022).
messages: The protein kinase domain is predicted to be catalytically inactive.
messages: Together with SZE1 and ZED1, required for effector-triggered immunity (e.g. Pseudomonas syringae type III effector HopZ1a) via the activation of ZAR1, thus being essential for resistance against P. syringae pv. tomato DC3000 expressing HopZ1a (PubMed:30947022). Collaboratively with BKN1, involved in compatible pollen-stigma interactions (PubMed:31829135).

3702:AT1G66740
gene id: 3702:AT1G66740
uniprot id: A0A178WM99
uniprot id: Q9C9M6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ASF1 family.
messages: Expressed in leaves and flower buds.
messages: Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly (By similarity). While encoded by a region of the Arabidopsis thaliana genome that is homologous to the Brassica S-locus for self incompatibility, this protein may not play the same role in Arabidopsis thaliana.
messages: Interacts with histone H3 and histone H4 (By similarity). Component of the HIRA complex made of UBN1, UBN2, ASF1A, CABIN1 and HIRA. Interacts with HIRA (PubMed:25086063).
messages: Nucleus
messages: nucleolus

3702:AT1G79110
gene id: 3702:AT1G79110
uniprot id: F4IDI6
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subunit
messages: Down-regulated by pathogen and salicylic acid. Up-regulated by salt, gibberellic acid and methyl jasmonate. Not regulated by 1-aminocyclopropane-1-carboxylic acid (ACC).
messages: Interacts with the DELLA proteins GAI, RGA, RGL1, RGL2 and RGL3.
messages: No visible phenotype. Decreased resistance to B.cinerea and increased cell death upon pathogen infection. Boi, brg1, brg2 and brg3 quadruple mutant shows a higher GA signaling resulting in a higher seed germination in the presence of paclobutrazol, precocious juvenile-to-adult phase transition and early flowering.
messages: Probable E3 ubiquitin-protein ligase. Has no effect on the stability of the DELLA proteins.
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G21750
gene id: 3702:AT1G21750
uniprot id: A0A178WAM1
uniprot id: F4HZN9
uniprot id: Q9XI01
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein disulfide isomerase family.
messages: By chemically-induced ER stress response.
messages: During embryo development, expressed exclusively in endothelial cells from the pre-embryo up to the heart stage. Expression disappears when the endothelial cells undergo PCD in the early-bent cotyledon stage (at protein level).
messages: Endoplasmic reticulum lumen
messages: Highly expressed in flowers, stems and immature seeds, and at lower levels in leaves and siliques (at protein level).
messages: Interacts with RD21A, At3g19390, At5g43060.
messages: Protein disulfide isomerase that associates with RD21A protease for trafficking from the ER through the Golgi to lytic and protein storage vacuoles of endothelial cells in developing seeds. Regulates the timing of programmed cell death (PCD) of the endothelial cells by chaperoning and inhibiting cysteine proteases during their trafficking to vacuoles.
messages: Reduced seed set.
messages: Vacuole

3702:AT1G31120
gene id: 3702:AT1G31120
uniprot id: A0A5S9WJH3
uniprot id: Q9SA05
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Potassium transporter.
messages: Putative potassium transporter.

3702:AT1G33120
gene id: 3702:AT1G33120
uniprot id: A0A178W8D1
uniprot id: P49209
names: Similarity
messages: Belongs to the universal ribosomal protein uL6 family.

3702:AT4G04370
gene id: 3702:AT4G04370
uniprot id: Q9XE98
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT4G24620
gene id: 3702:AT4G24620
uniprot id: A0A178UUU3
uniprot id: Q8H103
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GPI family.
messages: Inhibited by glycerol-3-P (G3P).
messages: Promotes the synthesis of starch in leaves.
messages: chloroplast stroma

3702:AT3G04320
gene id: 3702:AT3G04320
uniprot id: Q0WNE5
names: Function
names: Similarity
messages: Belongs to the protease inhibitor I3 (leguminous Kunitz-type inhibitor) family.
messages: Exhibits Kunitz trypsin protease inhibitor activity.

3702:AT5G62310
gene id: 3702:AT5G62310
uniprot id: Q9LE81
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Highly expressed in roots, elongating root hair cells and pollen grains.
messages: Modulates root tip growth. May play a common role in the tip growth of plant cells.
messages: Reduced root hair length.

3702:AT3G54810
gene id: 3702:AT3G54810
uniprot id: A0A654FH50
uniprot id: B9DHF1
uniprot id: Q9SV30
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT1G18580
gene id: 3702:AT1G18580
uniprot id: A0A384LDN7
uniprot id: Q949Q1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in developing seeds in siliques, mainly in the seed coat and, to a lesser extent, in the embryo.
messages: Belongs to the glycosyltransferase 8 family.
messages: Expressed in roots, inflorescences, siliques, seeds, leaves and stems.
messages: Glycosyltransferase involved in pectin and/or xylans biosynthesis in cell walls (By similarity). Required for the biosynthesis of pectin in seed coat epidermal (SCE) cells (PubMed:30228108). Collaboratively with MUCI70, essential for the accumulation of seed mucilage, a gelatinous wall rich in unbranched rhamnogalacturonan I (RG I), and for shaping the surface morphology of seeds (PubMed:30228108). Catalyzes homogalacturonan (HG) elongation by acting as an HG alpha-1,4 galacturonic acid transferase (PubMed:30228108).
messages: Golgi apparatus membrane
messages: Monomer.
messages: Strong reduction of seed mucilage accumulation, associated with reduced absolute levels of rhamnose (Rha), galacturonic acid (GalA) and xylose (Xyl) but increased absolute abundance of minor sugars (e.g. galactose (Gal), glucose (Glc) and mannose (Man)) (PubMed:30228108). The double mutant muci70-1 gaut11-3 is completely defective in seed mucilage production and exhibits a strong release of minor sugars in total mucilage extracts (PubMed:30228108).

3702:AT1G10030
gene id: 3702:AT1G10030
uniprot id: A0A178WJ70
uniprot id: O80594
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERG28 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT2G36530
gene id: 3702:AT2G36530
uniprot id: A0A178VT47
uniprot id: A0A1P8B1N1
uniprot id: P25696
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the enolase family.
messages: Homodimer.
messages: Mg(2+) is required for catalysis and for stabilizing the dimer.
messages: Mitochondrion outer membrane
messages: Multifunctional enzyme that acts as an enolase involved in the metabolism and as a positive regulator of cold-responsive gene transcription (PubMed:12032082). Binds to the cis-element the gene promoter of STZ/ZAT10, a zinc finger transcriptional repressor (PubMed:12032082).
messages: Nucleus
messages: cytosol

3702:AT2G23950
gene id: 3702:AT2G23950
uniprot id: A0A178VWX8
uniprot id: A0A1P8B246
uniprot id: Q0WVM4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT4G37830
gene id: 3702:AT4G37830
uniprot id: Q9T070
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 6A (TC 3.D.4.11) family.
messages: Mitochondrion inner membrane
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.

3702:AT5G23060
gene id: 3702:AT5G23060
uniprot id: Q9FN48
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By Ca(2+) (at protein level).
messages: Modulates cytoplasmic Ca(2+) concentration and is crucial for proper stomatal regulation in response to elevated levels of external Ca(2+). May function by regulating concentrations of inositol 1,4,5-trisphosphate (IP3), which in turn triggers release of Ca(2+) from internal stores. May play a role in de-etiolation.
messages: Phosphorylation seems to be light-dependent.
messages: Plants silencing CAS show reduced chlorophyll content and early bolting.
messages: Predominantly expressed in the shoot, including guard cells.
messages: Reduced growth.
messages: chloroplast thylakoid membrane

3702:AT1G26420
gene id: 3702:AT1G26420
uniprot id: A0A178W679
uniprot id: Q9FZC8
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: No effect on the levels of ICN metabolites.
messages: Probable flavin-dependent oxidoreductase.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G61820
gene id: 3702:AT5G61820
uniprot id: A0A384KNB4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G16780
gene id: 3702:AT2G16780
uniprot id: A0A7G2EB44
uniprot id: O22468
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
messages: Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA.
messages: Nucleus
messages: The DWD box is required for interaction with DDB1A.

3702:AT1G70610
gene id: 3702:AT1G70610
uniprot id: A0A178W3D9
uniprot id: A0A1P8ASG0
uniprot id: Q8RY46
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane
messages: chloroplast membrane

3702:AT4G30000
gene id: 3702:AT4G30000
uniprot id: A0A178UTC5
uniprot id: Q9SZV3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Catalyzes the first two consecutive steps of tetrahydrofolate biosynthesis.
messages: In the C-terminal section; belongs to the DHPS family.
messages: In the N-terminal section; belongs to the HPPK family.
messages: Mitochondrion
messages: Not induced by salt stress.
messages: Ubiquitous.

3702:AT2G17033
gene id: 3702:AT2G17033
uniprot id: Q8GWA9
names: Miscellaneous
names: Similarity
messages: Belongs to the PPR family. P subfamily.
messages: May be due to a competing donor splice site.

3702:AT1G27900
gene id: 3702:AT1G27900
uniprot id: Q93Y16
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. PRP22 sub-subfamily.
messages: May be involved in pre-mRNA splicing.

3702:AT3G48010
gene id: 3702:AT3G48010
uniprot id: Q9SU64
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Putative cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT2G38320
gene id: 3702:AT2G38320
uniprot id: A0A1P8B059
uniprot id: A0A654EZX9
uniprot id: O80919
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Golgi apparatus membrane
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).

3702:AT1G49910
gene id: 3702:AT1G49910
uniprot id: Q9C701
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat BUB3 family.
messages: Expressed in actively dividing tissues such as roots, flower buds, flowers and siliques.
messages: Has a dual function in spindle-assembly checkpoint signaling and in promoting the establishment of correct kinetochore-microtubule (K-MT) attachments. Promotes the formation of stable end-on bipolar attachments. Necessary for kinetochore localization of BUB1. The BUB1/BUB3 complex plays a role in the inhibition of anaphase-promoting complex or cyclosome (APC/C) when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20 (By similarity).
messages: No visible phenotype.
messages: Nucleus
messages: Part of the mitotic checkpoint complex (MCC).
messages: kinetochore
messages: phragmoplast
messages: spindle

3702:AT2G38370
gene id: 3702:AT2G38370
uniprot id: A0A1P8AX38
uniprot id: A0A654F1D4
uniprot id: F4ISY0
names: Similarity
messages: Belongs to the WEB family.

3702:AT2G31450
gene id: 3702:AT2G31450
uniprot id: Q9SIC4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nth/MutY family.
messages: Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.
messages: Binds 1 [4Fe-4S] cluster. The cluster does not appear to play a role in catalysis, but is probably involved in the proper positioning of the enzyme along the DNA strand.
messages: Expressed at low levels in roots, stems, leaves and flowers.
messages: No effect on chloroplastic glycosylase-lyase/endonuclease activity, probably due to function redundancy.
messages: chloroplast nucleoid

3702:AT1G47578
gene id: 3702:AT1G47578
uniprot id: P0C7R2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the LipB family.
messages: Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity) (PubMed:23581459). Together with LIP1P is essential for de novo plastidial protein lipoylation during seed development. Acts redundantly with LIP2P (PubMed:23581459).
messages: Expressed in roots, leaves, cauline leaves, stems, siliques and flowers.
messages: In the reaction, the free carboxyl group of octanoic acid is attached via an amide linkage to the epsilon-amino group of a specific lysine residue of lipoyl domains of lipoate-dependent enzymes.
messages: No visible phenotype under normal growth conditions, but the double mutants lip2p and lip2p2 are embryonic lethal.
messages: chloroplast

3702:AT2G38330
gene id: 3702:AT2G38330
uniprot id: A0A178VTF1
uniprot id: Q84K71
names: Caution
names: Disruption Phenotype
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Expressed in shoots.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: No reduction in aluminum tolerance.
messages: Not induced by aluminum.
messages: chloroplast membrane

3702:AT1G79070
gene id: 3702:AT1G79070
uniprot id: A0A654ERW5
uniprot id: Q8GXI5
names: Similarity
messages: Belongs to the SNAPIN family.

3702:AT3G58420
gene id: 3702:AT3G58420
uniprot id: A0A384KK03
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G28010
gene id: 3702:AT2G28010
uniprot id: A0A654EYA5
uniprot id: Q9SJJ2
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT2G42700
gene id: 3702:AT2G42700
uniprot id: A0A178VXX9
uniprot id: A0A1P8AY33
uniprot id: F4IP68
uniprot id: F4IP69
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulation of the precursors of the two major storage proteins albumin 2S and globulin 12S in dry seeds.
messages: Belongs to the STXBP/unc-18/SEC1 family.
messages: Endoplasmic reticulum membrane
messages: Forms a complex with MAG2, ZW10/MIP1 and MIP2 on the endoplasmic reticulum.
messages: Required for proper maturation of seed storage proteins. Forms a complex with MAG2, ZW10/MIP1 and MIP2 on the endoplasmic reticulum that may be responsible for efficient transport of seed storage proteins.

3702:AT4G36120
gene id: 3702:AT4G36120
uniprot id: O65649
names: Similarity
names: Subunit
messages: Belongs to the FPP family.
messages: Interacts with WPP/MAF proteins.

3702:AT1G73790
gene id: 3702:AT1G73790
uniprot id: A0A178WM34
uniprot id: Q9C9T3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MOZART1 family.
messages: In the gip1 gip2 double mutants, embryonic lethality and impaired development of male gametophytes, severe growth defects and sterility, characterized by microtubule (MT) misorganization and abnormal spindle polarity, resulting in ploidy defects.
messages: Mostly expressed in siliques and flowers, and, to a lower extent, in leaves, roots and seedlings, with highest levels in young tissues, meristematic cells, and the vasculature.
messages: Nucleus
messages: Nucleus envelope
messages: Part of the gamma-tubulin complex. Interacts with GIP1 and GCP3.
messages: Required for gamma-tubulin complex recruitment to the microtubule organizing centers (MTOCs) (By similarity). During mitosis, modulates gamma-tubulin complex localization, spindle stability and chromosomal segregation. Necessary for gametophyte development and embryogenesis.
messages: microtubule organizing center
messages: phragmoplast
messages: spindle

3702:AT3G48690
gene id: 3702:AT3G48690
uniprot id: Q9SMN0
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in leaves, stems, flowers and siliques.

3702:AT5G50240
gene id: 3702:AT5G50240
uniprot id: A0A1P8BE80
uniprot id: F4K8W6
uniprot id: Q64J17
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.
messages: By abscisic acid (ABA), drought and salt stress.
messages: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
messages: Expressed in rosette leaves, stems, cauline leaves, flowers and developing seeds.
messages: May be due to a competing acceptor splice site.
messages: Nucleus

3702:AT2G15400
gene id: 3702:AT2G15400
uniprot id: A0A384LLK9
uniprot id: A8MR04
uniprot id: Q0WRA4
uniprot id: Q39212
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase subunit family.
messages: Component of the RNA polymerase IV and V complexes. Interacts with NRPB11, SHH1, GRP23 and NRPD1.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79890
gene id: 3702:AT1G79890
uniprot id: A0A1P8APW6
uniprot id: A0A1P8APX9
uniprot id: Q9CA92
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G32440
gene id: 3702:AT2G32440
uniprot id: A0A384KBX4
uniprot id: Q058Q0
uniprot id: Q9C5Y2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Catalyzes three successive oxidations of ent-kaurenoic acid giving gibberellin 12 (GA12), a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development.
messages: Endoplasmic reticulum membrane
messages: Widely expressed. Highly expressed in influorescence stem, influorescence, and silique tissue. Weakly expressed in cauline and rosette leaves. Expressed at a weaker level in stem and influorescence than AtKAO1/CYP88A3.

3702:AT3G53060
gene id: 3702:AT3G53060
uniprot id: Q1PEF6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SKP1 family.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: May be the product of a pseudogene.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.

3702:AT1G80380
gene id: 3702:AT1G80380
uniprot id: Q944I4
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GLYK kinase family.
messages: Catalyzes the concluding reaction of the photorespiratory C2 cycle, an indispensable ancillary metabolic pathway to the photosynthetic C3 cycle that enables land plants to grow in an oxygen-containing atmosphere.
messages: Cytoplasm
messages: Cytoplasmic D-glycerate 3-kinase that constitutes a photorespiratory bypass that alleviates fluctuating light-induced photoinhibition (PubMed:29129375).
messages: Expressed in the dark.
messages: Expressed in the light.
messages: Isoform 1: Expressed in the light (PubMed:29129375). Isoform 3: Expressed in the dark (PubMed:29129375).
messages: chloroplast

3702:AT3G20450
gene id: 3702:AT3G20450
uniprot id: A0A384KQF7
uniprot id: Q9LTP7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.

3702:AT3G43440
gene id: 3702:AT3G43440
uniprot id: F4IZ48
uniprot id: Q9M246
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TIFY/JAZ family.
messages: Interacts with MYC2, MYB21, MYB24, AFPH2/NINJA, TIFY10A/JAZ1, TIFY10B/JAZ2, TIFY6B/JAZ3, TIFY6A/JAZ4, TIFY7/JAZ9 and TIFY9/JAZ10.
messages: Nucleus
messages: Repressor of jasmonate (JA) responses. Targets MYC2, MYC3 and MYC4 that are JA-dependent transcription activators.
messages: Repressor of jasmonate responses.
messages: The jas domain is required for interaction with COI1.
messages: The jas domains (101-120) and (197-222) are required for interaction with COI1.
messages: Ubiquitinated. Targeted for degradation by the SCF(COI1) E3 ubiquitin ligase-proteasome pathway during jasmonate signaling.
messages: Up-regulated by wounding and herbivory.

3702:AT4G39950
gene id: 3702:AT4G39950
uniprot id: A0A1P8B560
uniprot id: O81346
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Converts tryptophan to indole-3-acetaldoxime, a precursor for tryptophan-derived glucosinolates and indole-3-acetic acid (IAA) (PubMed:10681464, PubMed:10922360). Involved in the biosynthetic pathway to 4-hydroxyindole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic metabolite required for inducible pathogen defense (PubMed:26352477).
messages: Found in all tissues tested. Highest expression in roots, and low expression in stem.
messages: Membrane

3702:AT1G53060
gene id: 3702:AT1G53060
uniprot id: A0A178WLQ6
uniprot id: Q9LNN1
names: Caution
names: Similarity
messages: Belongs to the leguminous lectin family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G55630
gene id: 3702:AT5G55630
uniprot id: A0A178URA8
uniprot id: Q8LBL1
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 14-3-3 protein binding is not involved in endoplasmic reticulum export and tonoplast targeting.
messages: Belongs to the two pore domain potassium channel (TC 1.A.1.7) family.
messages: Could be activated by protein kinase C (By similarity). Strongly induced by calcium. Blocked by barium, tetraethylammonium (TEA), quinine and quinidine.
messages: Detected in mesophyll cells, guard cells and vascular tissues of the leaves. Expressed in the hilum, where the funiculus is attached during fruit maturation and in the embryo. Also expressed at a lower level in seedlings, root tips and elongation zones, and flowers. Could be detected in mitotically active tissues.
messages: Each of the two pore-forming region (also called P-domain or P-loop) is enclosed by two transmembrane segments (2P/4TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity. The C-terminus (328-363) is required for vacuolar targeting.
messages: Homodimer. Interacts with GRF1 and GRF6, but only GRF6 modulates the channel activity.
messages: Membrane
messages: Phosphorylation at Ser-42 increases and stabilizes the interaction with 14-3-3 proteins.
messages: Reduced growth in both high and low K(+) conditions. Slower germination and increased sensitivity to abscisic acid. Reduction of the total tonoplast current density.
messages: Vacuole membrane
messages: Voltage-independent, large conductance and potassium-selective tonoplast ion channel. Regulated by cytoplasmic calcium and pH. Does not mediate slow-vacuolar (SV) ionic currents, but essential to establish VK currents. Has some permeability for Rb(+) and NH(4)(+), but none for Na(+), Cs(+) or Li(+). Involved in intracellular K(+) redistribution and/or K(+) retranslocation between different tissues.
messages: Was initially described as an outward slow-vacuolar (SV) ion channel (PubMed:9184204, PubMed:11821043).

3702:AT5G45810
gene id: 3702:AT5G45810
uniprot id: A0A178UQC9
uniprot id: Q9FJ55
names: Domain
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT4G15360
gene id: 3702:AT4G15360
uniprot id: O23389
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G60510
gene id: 3702:AT5G60510
uniprot id: A0A178UA45
uniprot id: Q8LAR7
names: Function
names: Similarity
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.

3702:AT5G56860
gene id: 3702:AT5G56860
uniprot id: Q5HZ36
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by gibberellic acid (GA) (PubMed:20844019). Negatively regulated by AP3/PI (PubMed:18417639). Strong accumulation during cold imbibition of nondormant seeds, but not at warm temperatures. Regulated by PIF transcription factors (PubMed:20844019). Induced by cytokinin (e.g. benzyladenine) (PubMed:22811435). Repressed by HAN (PubMed:23335616). Inhibited by SOC1 (PubMed:23739688). Down-regulated by auxin (2,4D) and auxin response factors (e.g. ARF2 and ARF7) (PubMed:23878229).
messages: Belongs to the type IV zinc-finger family. Class B subfamily.
messages: Expressed predominantly in leaves, and barely in stems, flowers and siliques.
messages: First observed in the inflorescence meristem (IM) and young flower buds (PubMed:23335616). Detected throughout the floral bud. In young flowers, restricted to the inner whorls, specifically the petals, stamens, and carpels (PubMed:18417639, PubMed:23335616). In older flowers, present in the petals, stamen filaments and carpels, with weaker expression in the anthers of the stamens (PubMed:18417639). Observed in anther locules, vascular strands, and ovules (PubMed:23335616). During imbibition, expressed in the endosperm, especially at the time of testa rupture. Later restricted to the embryonic root (PubMed:20844019). In mature embryos, observed in the cotyledons and hypocotyl. In young seedlings, mostly expressed in shoot tissues, including the tip, circumference, and vasculature of the cotyledons, the emerging leaves, the meristematic region, and the basal part of the hypocotyl, and, at low levels, in the primary roots. In older seedlings, accumulates in the green shoot tissues (PubMed:22811435).
messages: Interacts with SNL1 (PubMed:19962994). Forms heterodimers with GATA18 (PubMed:23335616).
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Pale green leaves and reduced chlorophyll levels associated with altered regulation of sugar-sensing genes (e.g. HXK1, HXK2, STP13 and PLT6) (PubMed:18417639, PubMed:22102866, PubMed:22811435). Reduced chloroplast size (PubMed:22811435). Faster seed germination. Early flowering. Increased leaves size (PubMed:20844019, PubMed:22102866). Reduced gibberellic acid (GA) levels due to increased GA turnover and associated with reduced expression of GA-anabolizing enzymes (e.g. GA3OX1) but increased expression of GA-catabolizing enzymes (e.g. GA2OX2) (PubMed:20844019). Small seeds with deformed seed coats (PubMed:22102866). The double mutant gnc cga1, lacking both GATA22 and GATA21, exhibits reduced sensitivity to cytokinin (e.g. benzyladenine) toward chloroplasts growth (PubMed:22811435).
messages: Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (PubMed:22102866, PubMed:25077795). Involved in the modulation of chloroplast development, growth and division in a cytokinin-dependent manner (PubMed:22102866, PubMed:22811435). Repressor of the gibberellic acid (GA) signaling pathway that represses flowering and modulates greening, in a SOC1-dependent manner (PubMed:20844019, PubMed:23739688, PubMed:25077795). Prevents the accumulation of SOC1 during flowering (PubMed:23739688). Promotes chlorophyll biosynthesis throughout the plant, by regulating chlorophyll biosynthetic genes (e.g. HEMA1 and GUN4) and chloroplast localized glutamate synthase (e.g. GLU1) (PubMed:18417639, PubMed:20844019, PubMed:22102866, PubMed:23878229, PubMed:25077795). Involved in the regulation of sugar-sensing genes (e.g. HXK1, HXK2, STP13 and PLT6) (PubMed:18417639). Regulator of germination, senescence, elongation growth and flowering time (PubMed:20844019, PubMed:22102866, PubMed:23878229). Influences also leaf starch content (PubMed:22102866).

3702:AT1G80490
gene id: 3702:AT1G80490
uniprot id: Q0WV90
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Highly expressed in stamen primordium, microsporocyte, ovule primordium and megasporocyte during sporogenesis.
messages: Nucleus
messages: Overexpression of TPR1 leads to constitutive activation of defense responses.
messages: Partially suppresses the constitutive disease resistance phenotype of the snc1 mutant.
messages: Tetramer (PubMed:26601214). Interacts with SNC1 (via TIR domain) and HDA19 (PubMed:20647385). Interacts with SPL (via EAR motif) (PubMed:25527103, PubMed:25378179). Interacts with SPEAR3/TIE1 (PubMed:23444332). Binds to and corepresses GAF1/IDD2 (PubMed:25035403).
messages: The N-terminal TOPLESS domain (TPD) (1-209) binds directly to a 12-amino acid LxLxL EAR motif peptide.
messages: Transcriptional corepressor. Activates TIR-NB-LRR R protein-mediated immune responses through repression of negative regulators such as CNGC2/DND1 (PubMed:20647385). Negative regulator of jasmonate responses (By similarity).

3702:AT1G70940
gene id: 3702:AT1G70940
uniprot id: A0A384KH77
uniprot id: Q0WV81
uniprot id: Q9S7Z8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a component of the auxin efflux carrier. Seems to be involved in the lateral auxin transport system and mediates tropic growth. Coordinated polar localization of PIN3 is directly regulated by the vesicle trafficking process.
messages: Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
messages: Cell membrane
messages: Down-regulated by endoplasmic reticulum stress treatment.
messages: Expressed during embryogenesis. Detected in the precursors of the columella root cells.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May act as a component of the auxin efflux carrier.
messages: Membrane
messages: Plants display defects in hypocotyl differential growth.
messages: Predominantly expressed at the lateral side of shoot endodermis cells as well as root pericycle and columella cells.

3702:AT1G72300
gene id: 3702:AT1G72300
uniprot id: A0A5S9WRN9
uniprot id: C0LGI8
uniprot id: Q9C7S5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed ubiquitously, including in the shoot apical meristem and in the elongation zone of the root meristem.
messages: Homo- and heterodimers with PSKR1. Interacts (via C-terminus) with AHA1 and AHA2 (via the R-domain).
messages: Loss of sensitivity to PSY1 (PubMed:17989228). Loss of PSY1 induced phosphorylation of AHA2 and reduced hypocotyl elongation (PubMed:25267325). Increased symptom formation, disease index, lesion size and fungal growth after infection with A.brassicicola, but increased resistance to bacterial infection (PubMed:23062058).
messages: PSYR1 and PSKR1 mediate a signaling pathway by two distinct ligands, which redundantly contribute to cellular proliferation and plant growth.
messages: Tyrosine-sulfated glycopeptide receptor with a serine/threonine-protein kinase activity (PubMed:17989228, PubMed:25267325). Regulates, in response to tyrosine-sulfated glycopeptide binding, a signaling cascade involved in cellular proliferation and plant growth (PubMed:17989228). Not involved in PSK perception (PubMed:17989228). Involved in plant immunity, with antagonistic effects on bacterial and fungal resistances (PubMed:23062058). Mediates activation of the plasma membrane H(+)-ATPase by PSY1 (PubMed:25267325). Phosphorylates AHA2 at Thr-881 (PubMed:25267325).

3702:AT4G01070
gene id: 3702:AT4G01070
uniprot id: Q9M156
uniprot id: W8Q313
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Bifunctional O-glycosyltransferase and N-glycosyltransferase that can detoxify xenobiotics. Possesses high activity to metabolize the persistent pollutants 2,4,5-trichlorophenol (TCP) and 3,4-dichloroaniline (DCA). Also active on benzoates and benzoate derivatives in vitro.
messages: No visible phenotype under normal growth condition.

3702:AT1G02960
gene id: 3702:AT1G02960
uniprot id: A0A384L2G2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G47720
gene id: 3702:AT3G47720
uniprot id: Q9STU1
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Lacks the conserved catalytic triad His-Tyr-Glu of the active site.
messages: Nucleus
messages: Probable inactive ADP-ribosyltransferase that may be involved in stress and developmental responses.

3702:AT2G44190
gene id: 3702:AT2G44190
uniprot id: A0A5S9X762
uniprot id: O80588
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aborted seed development.
messages: Belongs to the QWRF family.
messages: Cell cycle-dependent regulation. Up-regulated during the G2/M phase.
messages: Cytoplasm
messages: Highly expressed in young siliques, seedlings, flower buds and open flowers. Weak expression in roots, and not detected in older siliques and mature leaves. Expressed in the embryo sac in prefertilization ovules and in seeds following fertilization. Detected in both embryo up to the heart stage and endosperm throughout most of the syncytial phase of endosperm development. Not detected in the cellularized endosperm, when cell division has ceased.
messages: Interacts with GRF5 in a phosphorylation-independent manner. The binding to microtubules occurs independently of the interaction with GRF5.
messages: Microtubule-associated protein required for seed development and for microtubule function in the endosperm. Associates with nuclear microtubules during mitosis. Binds to microtubules of the spindle and spindle-poles and to midzone microtubules out of which the phragmoplast emerges. Not associated with cortical microtubules. Required for endosperm cellularization. May be bound and sequestered by GRF5 in an inactive soluble form during the early stages of mitosis.
messages: Phosphorylated.
messages: cytoskeleton

3702:AT1G11760
gene id: 3702:AT1G11760
uniprot id: Q84VW5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the mediator complex subunit 32 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors.
messages: Nucleus
messages: Oligomers (PubMed:25877331). Component of the Mediator complex (PubMed:17560376). Interacts with MED6 (PubMed:17560376). Interacts with GEBPL (PubMed:25877331).

3702:AT4G38100
gene id: 3702:AT4G38100
uniprot id: A0A1P8B4V5
uniprot id: A0A654FWJ5
uniprot id: Q8LDD3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CURT family.
messages: Determines thylakoid architecture by inducing membrane curvature.
messages: Homo- and heterodimers and trimers.
messages: Membrane
messages: No effect on growth behavior, leaf coloration, grana stacks or photochemical efficiency of photosystem II. Curt1a, curt1b, curt1c and curt1d quadruple mutant shows disorganized thylakoids with extended stretches of unstacked membranes and broader stacks made up of fewer layers.
messages: chloroplast thylakoid membrane

3702:AT5G61280
gene id: 3702:AT5G61280
uniprot id: A0A178UCZ1
uniprot id: A0A1P8BA00
uniprot id: A0A1P8BA14
uniprot id: Q9FLK5
names: Similarity
messages: Belongs to the remorin family.

3702:AT1G08920
gene id: 3702:AT1G08920
uniprot id: A0A384L1H0
uniprot id: A8MR75
uniprot id: Q94KE0
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: By drought and high salinity conditions, and with exogenous application of abscisic acid (ABA), with high expression after 5 hour exposure to these conditions. Expression in roots is higher than that in leaves upon the high salinity and ABA treatment likewise as it is under normal conditions.
messages: Expressed in both shoots and roots. In roots, strongly expressed in pericycle and xylem parenchyma cells, and to a lesser extent in the root endodermis. In flowers, expressed in sepals.
messages: May be due to a competing acceptor splice site.
messages: Membrane
messages: No effect on the root lengths compared to those of wild-type plant under high salinity conditions.
messages: Sugar transporter. Transports monosaccharides across the vacuolar membrane independently from a proton gradient. May function coordinately with the vacuolar invertase to regulate osmotic pressure by affecting the accumulation of sugar in the cells under abiotic stress conditions.
messages: The N-terminal sequence motif LXXXLL is necessary for localization to the vacuole membrane (tonoplast).
messages: Vacuole membrane
messages: Vesicle

3702:AT2G40450
gene id: 3702:AT2G40450
uniprot id: A0A178VQV3
uniprot id: O22890
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT5G65450
gene id: 3702:AT5G65450
uniprot id: A0A1R7T3I4
uniprot id: A0A654GEC8
uniprot id: Q9FKP5
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the peptidase C19 family.
messages: May be due to a competing acceptor splice site.
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).

3702:AT3G22060
gene id: 3702:AT3G22060
uniprot id: Q9LRJ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT3G54460
gene id: 3702:AT3G54460
uniprot id: Q9M1I1
names: Similarity
messages: Belongs to the helicase family.

3702:AT1G55805
gene id: 3702:AT1G55805
uniprot id: A0A178WRD0
uniprot id: Q682I1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BolA/IbaG family.
messages: Belongs to the bolA/yrbA family.
messages: Interacts in vitro with GRXS14, GRXS15, GRXS16 and GRXS17, but not with GRXC5 (PubMed:24203231). Interacts in vivo only with GRXS14 and GRXS16 (PubMed:24203231, PubMed:24714563).
messages: May act either alone or in interaction with glutaredoxin as a redox-regulated transcriptional regulator, or as a factor regulating Fe-S cluster biogenesis (Probable). The glutaredoxin-BOLA1 heterodimers bind a labile, oxygen sensitive iron-sulfur cluster (PubMed:24714563).
messages: The GRXS14-BOLA1 apo-heterodimer model derived from NMR data shows a domain arrangement totally different from the holo-heterodimer showing evidence for a Rieske-type ligation of a [2Fe-2S] cluster.
messages: chloroplast

3702:AT5G24520
gene id: 3702:AT5G24520
uniprot id: Q9XGN1
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Interacts directly with GL3 and BHLH2. Part of a complex made of GL1, GL3 or BHLH2, and TTG1. Interacts with CCT8 (PubMed:21868675).
messages: May regulate MYC transcription factors. Involved in epidermal cell fate specification such as trichome and root hair development, seed mucilage production, and anthocyanin biosynthesis by acting at the dihydroflavonol-4-reductase (DFR) step. Together with GL1 and GL3, promotes trichome formation. Activates the transcription of GL2.
messages: Roots, leaves, stems, meristems, flowers and flower buds.

3702:AT3G21550
gene id: 3702:AT3G21550
uniprot id: A0A178VDX9
uniprot id: Q9LVF1
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in tissues undergoing abscission.
messages: Belongs to the plant DMP1 protein family.
messages: Endoplasmic reticulum membrane
messages: Expressed constitutively in leaves, stems, flowers, siliques and roots.
messages: Involved in membrane remodeling.
messages: Vacuole membrane

3702:AT1G36340
gene id: 3702:AT1G36340
uniprot id: Q9C8X7
names: Function
names: Induction
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: By biotic stresses.

3702:AT1G31814
gene id: 3702:AT1G31814
uniprot id: Q9C6S2
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the Frigida family.
messages: Expressed at low levels throughout the plant, with slightly higher expression in developing seeds and the highest expression in pollen.
messages: In cv. Columbia and cv. Landsberg erecta, either FRL1 or FRL2, but not both, is functional and required for FRI-mediated up-regulation of FLC (PubMed:17056759).
messages: Inactive FRIGIDA-like 2 protein.
messages: No effect on flowering time, due to a partial redundancy with FRL1. Frl1 and frl2 double mutants flower earlier than frl1 single mutant.
messages: The sequence displayed is a non-functional allele found in cv. Columbia. The protein in cv. Landsberg erecta (AC A0SWL0) only differ by two residues in positions 132 and 401 (Pro to Ala and Gln to Leu changes, respectively); these variations leading to activate the protein in cv. Landsberg erecta.

3702:AT5G18010
gene id: 3702:AT5G18010
uniprot id: Q9FJG1
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ARG7 family.
messages: By auxin (PubMed:22348445, PubMed:27999086). Triggered by brassinosteroids, including brassinolide (BL) (PubMed:30649552).
messages: Cell membrane
messages: Interacts with and inhibits PP2C-D subfamily of type 2C phosphatases such as PP2C67/PP2C-D1, PP2C64/PP2C-D5 and PP2C46/PP2C-D6.
messages: Provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), and triggers PM H(+)-ATPases activity by promoting phosphorylation of their C-terminal autoinhibitory domain as a result of PP2C-D subfamily of type 2C phosphatases inhibition, thus leading to the acidification of the apoplast and the facilitation of solutes and water uptake to drive cell expansion (PubMed:24858935, PubMed:27999086). Prevents the apical hook maintenance of etiolated seedlings (PubMed:24858935). Functions as positive effectors of cell expansion through modulation of auxin transport (PubMed:22348445, PubMed:27999086).
messages: Seedlings over-expressing SAUR19 display auxin-related phenotypes. These phenotypes include increased cell expansion, increased hypocotyl and leaf size, defective apical hook maintenance, altered tropic responses and increased basipetal auxin transport in hypocotyls.

3702:ArthCp049
gene id: 3702:ArthCp049
uniprot id: A0A1B1W4X0
uniprot id: P56777
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbB/PsbC family. PsbB subfamily.
messages: Binds multiple chlorophylls. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes (PubMed:20923938). Interacts with PAM68 (PubMed:20923938). Interacts with HHL1 (PubMed:24632535).
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3702:AT3G18650
gene id: 3702:AT3G18650
uniprot id: Q9LSB2
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with MEE14/CBP1.
messages: Nucleus
messages: Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction.

3702:AT2G26410
gene id: 3702:AT2G26410
uniprot id: F4IUJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus
messages: nucleolus

3702:AT3G61640
gene id: 3702:AT3G61640
uniprot id: Q9M373
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AG-peptide AGP family.
messages: Cell membrane
messages: Contains 4-hydroxyproline; hydroxylated on Pro-31, Pro-33 and Pro-35.
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT5G19550
gene id: 3702:AT5G19550
uniprot id: A0A384KI72
uniprot id: P46645
uniprot id: Q1EBW2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Cytoplasm
messages: Highly expressed during early germination.
messages: Homodimer.
messages: Important for the metabolism of amino acids and Krebs-cycle related organic acids. Involved in plant nitrogen metabolism of Asp and Asp-derived amino acids and in the synthesis of Asp/Asn for seed storage (PubMed:12068109). May be involved in the assessment of the pyridoxal phosphate levels in the cell (PubMed:21511809).
messages: In eukaryotes there are cytoplasmic, mitochondrial and chloroplastic isozymes.
messages: No visible phenotype, but slight modification of the amino acid composition. Growth defect, when grown in vitro.
messages: Several mutations in ASP2, but not all, suppress the root UV-B sensitive (rus) phenotype. A loss of ASP2 activity is not sufficient for this suppression.
messages: Up-regulated upon pathogen infection.

3702:AT2G23130
gene id: 3702:AT2G23130
uniprot id: O22194
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the lysine-rich AGP family.
messages: Cell membrane
messages: O-glycosylated on the hydroxyproline residues.
messages: Predominantly expressed in open flowers. Also expressed in leaves and stems, and at a lower level in roots.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT4G26110
gene id: 3702:AT4G26110
uniprot id: B3H684
uniprot id: Q9SZI2
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the nucleosome assembly protein (NAP) family.
messages: By brassinosteroids.
messages: Can form homomeric and heteromeric protein complexes with NAP1;2, NAP1;3 and NAP1;4. Binds histone H2A. Interacts with PP438/PNM1.
messages: Cytoplasm
messages: May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Contributes to the regulation of cell proliferation and cell expansion. May function in nucleotide excision repair (NER). Involved in somatic homologous recombination.
messages: No visible phenotype (PubMed:19228338). Enlarged plants early in the development but reduced plants in size in a later stage (PubMed:17041028).
messages: Nucleus
messages: Prenylation of the protein is required for its function during the cell proliferation phase of leaf development.
messages: The acidic domain is probably involved in the interaction with histones.
messages: Triple mutant nap1;1-nap1;2-nap1;3 has no obvious visible phenotype but exhibits hypersensitivity to DNA damage after UV-radiation, affected transcription of NER related genes (PubMed:19228338), slight hypersensitive response to abscisic acid (ABA) in seedling growth (PubMed:19825649) and impaired somatic homologous recombination (PubMed:22534127).
messages: Ubiquitous.

3702:AT3G11880
gene id: 3702:AT3G11880
uniprot id: A0A1I9LT89
uniprot id: A0A1I9LT91
uniprot id: A0A5S9XCM3
uniprot id: Q944J9
uniprot id: Q9SF11
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TMEM214 family.
messages: Constitutively interacts with CASP4; required for the localization of procaspase 4 to the ER.
messages: Critical mediator, in cooperation with CASP4, of endoplasmic reticulum-stress induced apoptosis. Required or the activation of CASP4 following endoplasmic reticulum stress.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G05260
gene id: 3702:AT1G05260
uniprot id: O23044
uniprot id: Q0WSR2
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Expressed in root cells.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated by cold temperatures and down-regulated by light. In response to low temperatures, transcripts accumulate in the whole etiolated seedlings but only in roots of light-grown seedlings.
messages: Vacuole

3702:AT5G38710
gene id: 3702:AT5G38710
uniprot id: A0A1P8BCG0
uniprot id: Q6NKX1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the proline oxidase family.
messages: Converts proline to delta-1-pyrroline-5-carboxylate.
messages: Down-regulated by high succrose; via the repression of bZIP11. Up-regulated by proline and salt or drought stress.
messages: Expressed in the vascular tissue and in the abscission zone of petals, sepals, stamina, pistils and siliques. Not detected in petioles.
messages: Mitochondrion
messages: No visible phenotype when grown under normal conditions. No proline hypersensitivity.
messages: Strongly expressed in senescent leaves.

3702:AT5G60010
gene id: 3702:AT5G60010
uniprot id: A0A178UE14
uniprot id: Q9FJD6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RBOH (TC 5.B.1.3) family.
messages: Calcium-dependent NADPH oxidase that generates superoxide.
messages: Membrane
messages: Monomer and homodimer.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G12780
gene id: 3702:AT3G12780
uniprot id: A0A178V5M8
uniprot id: Q9LD57
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoglycerate kinase family.
messages: May trigger the phosphorylation of FTSZ2-1 and FTSZ2-2.
messages: Monomer (By similarity). Binds to FTSZ2-1 and FTSZ2-2 (PubMed:22823492).
messages: Monomer.
messages: chloroplast

3702:AT2G15880
gene id: 3702:AT2G15880
uniprot id: Q9XIL9
names: Function
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in flowers, stamen, pollen, and pollinated carpels.
messages: Hydroxylated on proline residues in the S-P-P-P-P repeat.
messages: Modulates cell morphogenesis by regulating cell wall formation and assembly, and/or growth polarization.
messages: O-glycosylated on hydroxyprolines.
messages: cell wall

3702:AT5G44578
gene id: 3702:AT5G44578
uniprot id: A8MQS5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation.
messages: Cell membrane
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mostly expressed in seedlings shoots and roots, and, to a lower extent, in leaves, but barely in flowers.
messages: apoplast

3702:AT4G25020
gene id: 3702:AT4G25020
uniprot id: Q9SW24
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MOS2 family.
messages: Nucleus

3702:AT3G25493
gene id: 3702:AT3G25493
uniprot id: A0A1I9LNY7
names: Similarity
messages: Belongs to the formin-like family. Class-I subfamily.

3702:AT3G56940
gene id: 3702:AT3G56940
uniprot id: A0A178VH55
uniprot id: F4J0U9
uniprot id: Q9M591
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AcsF family.
messages: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME).
messages: Knock-down mutant (chl27-t) grow slowly with a pale green appearance. confers also severe defects in chloroplast development, including the unstacking of thylakoid membranes (PubMed:18682427).
messages: Part of the FLU-containing chloroplast membrane complex composed of FLU, CRD1, PORB, PORC, CHLP and HEMA1.
messages: chloroplast inner membrane
messages: chloroplast thylakoid membrane

3702:AT4G11655
gene id: 3702:AT4G11655
uniprot id: A0A178USV5
uniprot id: A0A1P8B6E3
uniprot id: Q3EA54
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT1G72590
gene id: 3702:AT1G72590
uniprot id: Q9CAH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the steroid 5-alpha reductase family. Polyprenol reductase subfamily.
messages: Cell membrane
messages: Expressed in roots and flowers.
messages: Plays a key role in early steps of protein N-linked glycosylation by being required for the conversion of polyprenol into dolichol. Dolichols are required for the synthesis of dolichol-linked monosaccharides and the oligosaccharide precursor used for N-glycosylation. Acts as a polyprenol reductase that promotes the reduction of the alpha-isoprene unit of polyprenols into dolichols in a NADP-dependent mechanism. Involved in the regulation of plant growth and reproductive processes.

3702:AT3G49725
gene id: 3702:AT3G49725
uniprot id: Q0WTB4
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
messages: In contrast to other GTP-binding proteins, this family is characterized by a circular permutation of the GTPase motifs described by a G4-G1-G3 pattern.
messages: chloroplast

3702:AT4G14385
gene id: 3702:AT4G14385
uniprot id: A0A1P8B4S3
uniprot id: A0A654FP91
uniprot id: B9DG35
uniprot id: F4JVF3
uniprot id: Q93VF4
names: Similarity
messages: Belongs to the EAF6 family.

3702:AT2G27470
gene id: 3702:AT2G27470
uniprot id: A0A654EWP5
uniprot id: Q9ZQH2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex (By similarity). The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity).
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC (By similarity). NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity). Binds directly with DPB3-1 (PubMed:25490919).
messages: Nucleus
messages: Repressed by heat and dehydration stress.

3702:AT1G52060
gene id: 3702:AT1G52060
uniprot id: F4IB95
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT3G51310
gene id: 3702:AT3G51310
uniprot id: A8R7K9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VPS35 family.
messages: Component of the retromer complex which consists of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C), VPS5/17 (SNX1 or SNX2A or SNX2B). Component of a retromer subcomplex consisting of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C).
messages: Cytoplasm
messages: Endosome membrane
messages: Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. Also involved in the efficient sorting of seed storage proteins (By similarity). The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane.
messages: Prevacuolar compartment membrane
messages: trans-Golgi network membrane

3702:AT1G79790
gene id: 3702:AT1G79790
uniprot id: A0A178WFR0
uniprot id: Q84VZ1
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.
messages: FMN hydrolase that catalyzes the dephosphorylation of flavin mononucleotide (FMN) to riboflavin (PubMed:22002057, PubMed:24123841, PubMed:27490826). Can also dephosphorylate 5-amino-6-(5-phospho-D-ribitylamino)uracil, also known as ARPP (PubMed:24123841, PubMed:27490826). Not required for riboflavin biosynthesis in planta, but may help maintaining flavin homeostasis within chloroplasts (PubMed:27490826).
messages: Homodimer.
messages: No visible phenotype and no effect on flavin metabolite profile and abundances.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast stroma

3702:AT3G05520
gene id: 3702:AT3G05520
uniprot id: A0A1I9LMY3
uniprot id: F4J7C4
uniprot id: O82631
uniprot id: Q541X2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the F-actin-capping protein alpha subunit family.
messages: F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (By similarity).
messages: F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
messages: Heterodimer of an alpha and a beta subunit.

3702:AT3G54840
gene id: 3702:AT3G54840
uniprot id: A0A178VAL4
uniprot id: Q9CB01
names: Caution
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by VPS9A.
messages: Although this sequence lacks the C-terminal cysteine motifs subject to isoprenylation in other Rab proteins, it does have N-terminal N-myristoylation and S-palmitoylation.
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Early endosome membrane
messages: Endoplasmic reticulum
messages: Endosomal protein probably involved in endocytosis. Probably not involved in vacuolar trafficking.
messages: Endosome membrane
messages: Interacts with VPS9A (PubMed:18055610). Interacts with TCTP1 (PubMed:20736351).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Widely expressed.

3702:AT3G56310
gene id: 3702:AT3G56310
uniprot id: Q8VXZ7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycosyl hydrolase 27 family.
messages: Homodimer.
messages: May be processed or degraded in a VPEgamma-dependent manner in vacuoles.
messages: May regulate leaf (and possibly other organ) development by functioning in cell wall loosening and cell wall expansion.
messages: Vacuole
messages: apoplast
messages: cell wall

3702:AT3G47950
gene id: 3702:AT3G47950
uniprot id: A0A178VFQ4
uniprot id: Q9SU58
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Binds to 14-3-3 proteins. The binding is induced by phosphorylation of Thr-959. Binding to 14-3-3 proteins activates the H(+)-ATPase (By similarity).
messages: Cell membrane
messages: The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity).

3702:AT1G53270
gene id: 3702:AT1G53270
uniprot id: A0A178WBC4
uniprot id: Q9MAH4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane

3702:AT1G78200
gene id: 3702:AT1G78200
uniprot id: Q8L7I4
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT4G14800
gene id: 3702:AT4G14800
uniprot id: A0A178UVU0
uniprot id: F4JIF9
uniprot id: O24633
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1B family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: Non-catalytic component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Nucleus
messages: Ubiquitous low levels, higher expression in siliques and flowers.

3702:AT1G63950
gene id: 3702:AT1G63950
uniprot id: Q9CAK6
names: Caution
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the HIPP family.
messages: Expressed in embryo sacs.
messages: Probable heavy-metal-binding protein.
messages: The HMA domain lacks the core conserved Cys-X-X-Cys motif.

3702:AT3G17470
gene id: 3702:AT3G17470
uniprot id: A0A1I9LR75
uniprot id: A0A1I9LR76
uniprot id: Q84R11
names: Activity Regulation
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by calcium.
messages: Belongs to the RelA/SpoT family.
messages: Circadian-regulation with a peak at midnight.
messages: Expressed in shoots, cotyledons, rosette and cauline leaves, stems, sepals, pistils and siliques.
messages: Plants silencing CRSH have abnormally small siliques with few seeds, due to altered timing of pistil and pollen maturation and unsuccessful pollination.
messages: Possesses calcium-dependent ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. Plays an important role in the timing adjustment of pistil and pollen maturation required for successful pollination. May be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses.
messages: The calcium-binding sites of the 2 EF-hand domains are required for enzyme activity.
messages: chloroplast

3702:AT5G22110
gene id: 3702:AT5G22110
uniprot id: A0A1P8BH84
uniprot id: Q500V9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As accessory component of DNA polymerase II participates in chromosomal DNA replication. Required for the timing and determination of cell fate during plant embryogenesis and root pole development, by promoting cell cycle and cell type patterning. Necessary for proper shoot (SAM) and root apical meristem (RAM) functions (By similarity). Is essential to promote the first divisions of the zygote (PubMed:16212602).
messages: Belongs to the DNA polymerase epsilon subunit B family.
messages: Cell cycle regulated. Up-regulated at the G1/S phase transition and then decreases rapidly as cells progress into S-phase.
messages: During plant development, expressed in the shoot and root meristematic regions, but not inthe meristems in seeds at germination nor in trichomes undergoing endoreduplication. During male gametogenesis, transiently expressed in immature pollen grains at the time of post-meiotic mitosis, but not in the female macrospores at any time of development. Expressed in the embryo sac after fertilization and the in the embryo proper and suspensor cells until the globular stage. At the triangular stage, expressed in the forming shoot apical meristem.
messages: Embryonic lethality when homozygous, due to embryo development arrested at one-cell stage.
messages: Nucleus
messages: Participates in DNA repair and in chromosomal DNA replication.
messages: Subunit of the DNA polymerase II (Probable). Interacts with POL2A (via C-terminus) (PubMed:16212602).

3702:AT1G80870
gene id: 3702:AT1G80870
uniprot id: Q9SAH3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G78340
gene id: 3702:AT1G78340
uniprot id: A0A178W934
uniprot id: Q8GYM1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: Is involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT3G04600
gene id: 3702:AT3G04600
uniprot id: A0A178V9J0
uniprot id: F4J4T3
uniprot id: Q9SR15
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: cytosol

3702:AT2G25840
gene id: 3702:AT2G25840
uniprot id: A0A178VQC6
uniprot id: A0A1P8AY21
uniprot id: F4ISP4
uniprot id: F4ISP6
uniprot id: Q8RXE9
names: Caution
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Lethal. In heterozygous plants, aborted ovules.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G06720
gene id: 3702:AT1G06720
uniprot id: A0A1P8AVE9
uniprot id: A0A1P8AVJ3
uniprot id: F4IDR3
names: Subcellular Location Annotation
messages: nucleolus

3702:AT5G61290
gene id: 3702:AT5G61290
uniprot id: A0A654GD52
uniprot id: Q9FLK4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the FMO family.
messages: Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.
messages: Interacts with EER5.

3702:AT2G46020
gene id: 3702:AT2G46020
uniprot id: Q6EVK6
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: ATPase subunit of a multiprotein complex equivalent of the SWI/SNF complex that acts by remodeling the chromatin by catalyzing an ATP-dependent alteration in the structure of nucleosomal DNA. Represses embryonic genes in leaves and controls shoot development and flowering. Activates flower homeotic genes. The association of BRM with its target genes requires REF6 (PubMed:27111034). Necessary to acquire heat stress (HS) memory, by globally binding to HS memory genes (PubMed:27680998).
messages: Belongs to the SNF2/RAD54 helicase family.
messages: Highly expressed in inflorescences and leaves. Low expression in siliques, roots and seedlings. Detected in shoot apical meristem, root meristem, vascular tissue of developing leaves, petals, stamens filaments, anthers and carpels.
messages: Interacts with SWI3B, SWI3C, H3 and H4, but not with SWI3A, SWI3D or BSH (PubMed:15371304, PubMed:16845477, PubMed:17825834). Interacts with LFY (PubMed:22323601). Interacts with REF6 (PubMed:27111034). Binds to FGT1 (PubMed:27680998).
messages: Nucleus
messages: Sterility. Reduced heat stress (HS) memory associated with a premature decline of expression of HSA32, HSP18.2, HSP21, HSP22 and HSP101 after HS. The double mutant brm-1 fgt1-1 exhibits retarted seedling development resulting in reduced development and delayed leaf initiation, as well as delayed flowering time.
messages: The AT-hook region (1568-1919) contains at least 3 DNA-binding sites with different characteristics.
messages: The bromodomain binds histones.
messages: Was previously split between At2g46010 and At2g46020.

3702:AT2G38530
gene id: 3702:AT2G38530
uniprot id: A0A178W063
uniprot id: Q9S7I3
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

3702:AT2G46980
gene id: 3702:AT2G46980
uniprot id: Q0WR66
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Chromosome
messages: Interacts with ASY1.
messages: Nucleus
messages: Required for normal meiosis in male and female gametophytes. Acts with ASY1 at the interface between the developing chromosome axes and the recombination machinery to ensure interhomolog recombination. Required for synaptonemal complex formation during meiosis.

3702:AT2G23970
gene id: 3702:AT2G23970
uniprot id: A0A5S9X0L9
uniprot id: O82225
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C26 family.
messages: Involved in glucosinolate biosynthesis. Hydrolyzes the gamma-glutamyl peptide bond of several glutathione (GSH) conjugates to produce Cys-Gly conjugates related to glucosinolates. The gamma-Glu-Cys-Gly-GSH conjugates are the sulfur-donating molecule in glucosinolate biosynthesis.
messages: cytosol

3702:AT4G16600
gene id: 3702:AT4G16600
uniprot id: A0A384LLB2
uniprot id: F4JMI5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family. Glycogenin subfamily.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G07530
gene id: 3702:AT5G07530
uniprot id: A0A1P8BDM8
uniprot id: Q9LY09
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oleosin family.
messages: Delayed pollen hydration and impaired competitive ability due to a failure to interact with the stigma (PubMed:10655594, PubMed:20033440). Abnormal anther tapetum development (PubMed:26305561).
messages: Flower specific, especially in anther tapetum, pollen (at protein level) and flowers florets.
messages: Lipid droplet
messages: Lipid-binding oleosin pollen coat protein required to mediate pollen recognition by stigma cells and subsequent pollen hydration (PubMed:10655594, PubMed:20033440, PubMed:26305561). Involved in anther tapetum development, especially for the physiology of tapetosomes (PubMed:26305561). Also implicated in the formation of pollen coat (PubMed:26305561).
messages: Membrane
messages: Mostly expressed in anthers at the later stage of flower development until tapetum degeneration (PubMed:8220457, PubMed:23602096). In flowers, present in the anther tapetum early in anther development and later in the pollen coat (PubMed:11929861, PubMed:26305561). Upon tapetum degeneration, associated with tapetosomal debris 'in transit' to the pollen cell wall in the anther locule (PubMed:26305561, PubMed:23602096). Translocates from the pollen coat at exine cavities to the site of contact between the pollen grain and a papillar cell, called 'foot', 10 minutes after pollen landing; the pollen tube elongation initiates later (about 20 minutes after pollination) at the foot (PubMed:26305561).
messages: Proteolytically cleaved following anther tapetal breakdown.
messages: pollen coat

3702:AT5G19610
gene id: 3702:AT5G19610
uniprot id: A0A654G2K0
uniprot id: F4K2K3
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Essential for pollen germination.
messages: Failure of pollen germination.
messages: Homodimer.
messages: Membrane
messages: Preferentially expressed in mature pollen grains and growing pollen tubes.
messages: cytosol

3702:AT1G12630
gene id: 3702:AT1G12630
uniprot id: Q38Q39
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G29680
gene id: 3702:AT3G29680
uniprot id: Q9LRQ7
names: Induction
names: Similarity
messages: Belongs to the plant acyltransferase family.
messages: Up-regulated by high sucrose and by low phosphate stresses.

3702:AT2G38410
gene id: 3702:AT2G38410
uniprot id: A0A178VUF4
uniprot id: O80910
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a gatekeeper for degradative protein sorting to the vacuole. Plays a role in recognition of ubiquitinated PIN2 auxin carrier at the plasma membrane and further to its endocytic sorting. Binds ubiquitin in vitro (PubMed:24316203). Might contribute to the loading of the ESCRT machinery (Probable).
messages: Belongs to the TOM1 family.
messages: Cytoplasm
messages: Early endosome membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitously expressed.
messages: multivesicular body

3702:ArthCp013
gene id: 3702:ArthCp013
uniprot id: A0A8F5GHA9
uniprot id: P56763
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 Zn(2+) ion per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: chloroplast

3702:AT1G09770
gene id: 3702:AT1G09770
uniprot id: P92948
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accelerated cell death. Enhanced susceptibility to virulent and avirulent pathogens.
messages: Belongs to the CEF1 family.
messages: Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Possesses a sequence specific DNA sequence 'CTCAGCG' binding activity. Involved in mRNA splicing and cell cycle control. May also play a role in the response to DNA damage.
messages: Component of the multiprotein assembly MOS4-associated complex (MAC) at least composed of MOS4, CDC5, PRL1 and PRP19. Interacts with PRL1, MOS4 and PRP19A. Associated with the spliceosome.
messages: Expressed extensively in shoot and root meristems.
messages: Nucleus

3702:AT3G24240
gene id: 3702:AT3G24240
uniprot id: Q9LHP4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in roots.
messages: Interacts with beet curly top virus AL4/C4 (PubMed:17280695). Binds to RGF peptides such as RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN; these interactions trigger the formation of heterodimers with SERK1, SERK2 or BAK1/SERK3 via LRR regions (PubMed:27001831, PubMed:27229311, PubMed:27229312). Interacts with UBP13 (PubMed:29339500).
messages: Phosphorylated and ubiquitinated upon interaction with RGF1, thus leading to activation a subsequent degradation (PubMed:27229312). Stabilized by UBP12 and UBP13-mediated deubiquitination (PubMed:29339500).
messages: Present in the whole roots with a predominant expression in the proximal meristem, including the elongation zone, and a gradual decreases toward the differentiation zone.
messages: Smaller root meristem size and fewer root meristematic cortex cells, associated with shorter roots and a slighty reduced sensitivity to RGF1 (PubMed:27229311). Quintuple mutants rgi1 rgi2 rgi3 rgi4 rgi5 display a consistent short primary root phenotype with a small size of meristem associated with a total insensitivity to RGF1 and undetectable levels of PLT1 and PLT2 (PubMed:27229312). The triple mutant missing RGI1, RGI2 and RGI3 is insensitive to externally applied RGF peptides (e.g. RGF1 and RGF2) and has short roots characterized by a strong decrease in meristematic cell number and declined levels of PLT1 and PLT2 at the root tip (PubMed:27001831).
messages: Together with RGI2, RGI3, RGI4 and RGI5, acts as receptor of RGF peptides (e.g. RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN), peptide hormones which maintain the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT, e.g. PLT1 and PLT2) (PubMed:27229312, PubMed:27229311, PubMed:27001831). Links RGF peptides signal with their downstream components (PubMed:27229311, PubMed:27001831).

3702:AT4G26310
gene id: 3702:AT4G26310
uniprot id: F4JUX3
uniprot id: Q940K8
names: Similarity
messages: Belongs to the elongation factor P family.

3702:AT2G20190
gene id: 3702:AT2G20190
uniprot id: Q8RWY6
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: An article reported an auxin transcription module controlling cell division plane rotation through CLASP; however, this paper was later retracted.
messages: Belongs to the CLASP family.
messages: Cortical microtubule plus-end tracking protein required for cell morphogenesis and cell division. Promotes the stabilization of dynamic microtubules during mitosis. Regulates microtubule-cortex attachment, thereby contributing to self-organization of cortical microtubules and subsequent cell shape.
messages: Expressed at a low level in all tissues, mostly in young developing tissues.
messages: Various plant growth reductions (e.g. dwarf), cell form defects (e.g. reduced trichome branches number) and reduced mitotic activity. Less root cortical microtubule arrays hypersensitive to microtubule-destabilizing drugs. Aberrant microtubule preprophase bands, mitotic spindles, and phragmoplasts.
messages: cell cortex
messages: cytoskeleton
messages: phragmoplast
messages: spindle

3702:AT1G15540
gene id: 3702:AT1G15540
uniprot id: A0A1P8AVH5
uniprot id: A0A1P8AVH8
uniprot id: A0A384KUB8
uniprot id: Q9M9D9
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT5G52050
gene id: 3702:AT5G52050
uniprot id: A0A178UM67
uniprot id: Q9FJ87
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: By abscisic acid.
messages: Cell membrane
messages: Functions as a multidrug and toxin extrusion transporter in the export of abscisic acid (ABA) in guard cells. Plays a role in ABA-mediated growth inhibition and responses to drought conditions (PubMed:24851876). May act as a negative regulator of hypocotyl cell elongation in the light (PubMed:26160579).
messages: Late endosome membrane
messages: Membrane
messages: Overexpression of DTX50 alters shoot developmental programs leading to a loss of apical dominance phenotype.
messages: Preferentially expressed in rosette leaves. Detected mainly in the vascular tissues and guard cells (PubMed:24851876). Mostly detected at reproductive stages in young anthers, in mature pollens and during pollen germination on the pistil. Also expressed in developing seeds (PubMed:26160579).
messages: Smaller and yellowish rosette leaves. Enhanced sensitivity to abscisic acid (ABA) in growth inhibition and seed germination. Accumulation of ABA in leaves. Enhanced tolerance to drought with lower stomatal conductance.

3702:AT3G49920
gene id: 3702:AT3G49920
uniprot id: A0A1I9LMK6
uniprot id: A0A654FHM7
uniprot id: F4IZ90
uniprot id: Q9M2W6
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.
messages: Consists mainly of membrane-spanning sided beta-sheets.
messages: Could be the product of a pseudogene.
messages: Mitochondrion outer membrane
messages: Putative channel that allows diffusion of small hydrophilic molecules through membranes.

3702:AT4G00480
gene id: 3702:AT4G00480
uniprot id: A0A1P8B8H4
uniprot id: C0SVG1
uniprot id: F4JHC4
uniprot id: Q8W2F1
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By cold, UV, flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments.
messages: Homodimer (Probable). Interacts with MYB75/PAP1, MYB90/PAP2, MYB4, MYB5, MYB6, MYB23, MYB82, MYB113, MYB114, TT2, MYB0/GL1, and MYB66/WER.
messages: Mostly expressed in developing seeds. Also detected in stems and leaves.
messages: Nucleus
messages: Trancsription activator, when associated with MYB75/PAP1 or MYB90/PAP2.

3702:AT4G18990
gene id: 3702:AT4G18990
uniprot id: A0A178V5N3
uniprot id: A0A1P8B8L6
uniprot id: Q8L7H3
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 3 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: In contrast to group 1 and group 2 endotransglucosylase/hydrolase proteins, it may not contain the ligase activity, and may catalyze endohydrolysis xyloglucan polymers only.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast
messages: cell wall

3702:AT3G06830
gene id: 3702:AT3G06830
uniprot id: Q8GXA1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in mature pollen grains in the anthers and on the stigma. Found in pollen tubes within the style.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT5G38640
gene id: 3702:AT5G38640
uniprot id: A0A654G655
uniprot id: Q9FFV8
names: Similarity
messages: Belongs to the eIF-2B alpha/beta/delta subunits family.

3702:AT5G14370
gene id: 3702:AT5G14370
uniprot id: A0A654G1L6
uniprot id: Q949T9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G12380
gene id: 3702:AT5G12380
uniprot id: A0A5S9Y3J8
uniprot id: Q94CK4
uniprot id: X5JAK8
names: Domain
names: Induction
names: Similarity
messages: A pair of annexin repeats may form one binding site for calcium and phospholipid.
messages: Belongs to the annexin (TC 1.A.31.1) family.
messages: Belongs to the annexin family.
messages: Up-regulated by dehydration and salt stresses.

3702:AT2G36170
gene id: 3702:AT2G36170
uniprot id: A0A178W3S3
uniprot id: B9DHA6
uniprot id: Q42202
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Component of the 60S subunit of the ribosome.
messages: Cytoplasm
messages: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eL40 family.
messages: In the N-terminal section; belongs to the ubiquitin family.
messages: Nucleus
messages: Part of the 60S ribosomal subunit.
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there are one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either eL40 or eS31) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT2G39690
gene id: 3702:AT2G39690
uniprot id: A0A384KTC2
uniprot id: A0A384L4Z6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G25655
gene id: 3702:AT3G25655
uniprot id: Q29PV4
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots.
messages: IDL1 is redundant with IDA.
messages: Involved in an ethylene-independent separation step of floral abscission. May act with RLK5 and HSL2 as ligand-receptor pairs.
messages: The N-terminal signal peptide is necessary for IDL1 function.
messages: extracellular space

3702:AT5G20340
gene id: 3702:AT5G20340
uniprot id: O49353
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: May play a role in plant defense against pathogens.
messages: Secreted

3702:AT3G11240
gene id: 3702:AT3G11240
uniprot id: A0A1I9LNK3
uniprot id: A0A1I9LNK5
uniprot id: Q9C776
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the R-transferase family.
messages: Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway.
messages: Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Component of the N-end rule pathway with ATE1 and PRT6 (PubMed:19255443, PubMed:19620738, PubMed:22020282). The N-end rule pathway regulates seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination (PubMed:19255443). The end-rule pathway regulates various aspects of leaf and shoot development (PubMed:19620738). Involved in the oxygen-dependent N-arginylation of RAP2-12, an activator of hypoxic gene expression. This N-terminal modification leads to ubiquitination by PRT6 and subsequent degradation of RAP2-12 under aerobic conditions (PubMed:22020282). Involved in disease resistance (PubMed:27173012). The end-rule pathway plays a role in regulating the timing and amplitude of the immune response following infection with the bacterial pathogen Pseudomonas syringae pv tomato (PubMed:27173012). Regulates the biosynthesis of plant-defense metabolites such as glucosinolates, and the biosynthesis and response to the phytohormone jasmonate (JA), which plays a key role in plant immunity (PubMed:27173012).
messages: The double mutants ate1 and ate2 show reduced seed germination potential and inhibition of seedling establishment by sucrose (PubMed:19255443). The double mutants ate1 and ate2 exhibit abnormal shoot and leaf development (PubMed:19620738).

3702:AT2G06983
gene id: 3702:AT2G06983
uniprot id: A0A178VVQ3
uniprot id: P82635
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G16100
gene id: 3702:AT5G16100
uniprot id: A0A1R7T3I3
names: Function
messages: Putative transcription factor.

3702:AT5G51100
gene id: 3702:AT5G51100
uniprot id: A0A1P8BBJ5
uniprot id: A0A1P8BBK0
uniprot id: A0A1P8BBM1
uniprot id: Q9LU64
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by cpn20/cpn21 (in vitro).
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Binds 1 Fe cation per subunit.
messages: By UV-B treatment. Induced by salt stress.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
messages: Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems (By similarity). Plays important role in chloroplast development, particularly in the maintenance of thylakoids membranes. Seems to act as a heterodimer with FSD3.
messages: Heterodimer with FSD3 (PubMed:18996978). Interacts with MRL7 and PRDA1 (PubMed:24132784).
messages: Pale green phenotype. Abnormal plastids, highly vacuolated and without internal membrane structures like thylakoids.
messages: chloroplast thylakoid

3702:AT5G45820
gene id: 3702:AT5G45820
uniprot id: Q9FJ54
names: Domain
names: Function
names: PTM
names: Similarity
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity). Required for the abscisic acid-mediated (ABA) signaling pathway involved in seed germination and growth elongation inhibition.
messages: Confined to mature leaves.
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT1G06780
gene id: 3702:AT1G06780
uniprot id: F4IDS0
uniprot id: Q9M9Y5
uniprot id: W8PW41
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 8 family.
messages: Expressed in roots, inflorescences, siliques, leaves and stems.
messages: Golgi apparatus membrane
messages: Probably involved in pectin biosynthesis in cell walls.
messages: Reduced galacturonic acid content in cell wall.

3702:AT2G48010
gene id: 3702:AT2G48010
uniprot id: P93050
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in the whole plant at low levels.

3702:AT1G35350
gene id: 3702:AT1G35350
uniprot id: A0A178WKJ1
uniprot id: A0A1P8APE1
uniprot id: Q6R8G2
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SYG1 (TC 2.A.94) family.
messages: Cell membrane
messages: Expressed in root epidermis, leaf hydathodes, trichomes and petioles, stem vascular cylinder, receptacle, stigma apex and pollen grains.
messages: May transport inorganic phosphate (Pi).
messages: Membrane
messages: Not induced by Pi deficiency.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G03600
gene id: 3702:AT5G03600
uniprot id: A0A1P8BE59
uniprot id: Q9LZS8
names: Similarity
messages: Belongs to the 'GDSL' lipolytic enzyme family.

3702:AT5G09280
gene id: 3702:AT5G09280
uniprot id: Q9FY87
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT5G56280
gene id: 3702:AT5G56280
uniprot id: A0A384LEP1
uniprot id: Q1EC57
uniprot id: Q8W206
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Although strongly related to metalloprotease proteins, it lacks the JAMM motif that probably constitutes the catalytic center. Its function as protease is therefore unsure.
messages: Belongs to the peptidase M67A family. CSN6 subfamily.
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Essential for the structural integrity of the CSN holocomplex (PubMed:17307927).
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8. Interacts with itself. In the complex, it probably interacts directly with CSN4 and CSN5A or CSN5B. Interacts with CSN7 (via C-terminal tail). Binds to the translation initiation factors TIF3E1 (PubMed:19704582).
messages: Cytoplasm
messages: No visible phenotype when grown under normal conditions, due to the redundancy with CSN6A. Csn6a and csn6b double mutants are lethal at the seedling stage.
messages: Nucleus

3702:AT1G24250
gene id: 3702:AT1G24250
uniprot id: O48692
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G22010
gene id: 3702:AT5G22010
uniprot id: A0A1P8BA43
uniprot id: Q9C587
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the activator 1 large subunit family.
messages: Expressed at high levels in flowers and siliques, and at lower levels in roots, stems and leaves.
messages: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can form a complex with RFC1.
messages: Nucleus
messages: Plays a role as mediator of transcriptional gene silencing (TGS), DNA replication, DNA repair, hypersensitive response (HR) and telomere length regulation. Is required in meiosis for DNA double-strand break (DSB) repair during meiotic homologous recombination. May participate in the RAD51-mediated recombination intermediate repair process. Is important for lagging strand synthesis. Promotes meiotic recombination via a specific pathway for crossovers (COs) that involves the formation of double Holliday Junction (dHJ) intermediates.
messages: The rfc1-1 EMS mutants show reduced plant growth and organ size, and early flowering (PubMed:20639449). The rfc1-2 T-DNA mutants have normal vegetative growth, but have greatly reduced fertility due to a meiotic defect and produce short seed pods with very few seeds (PubMed:23144629). The rfc1-3 T-DNA mutant is embryonic lethal when homozygous (PubMed:23144629).

3702:AT5G43440
gene id: 3702:AT5G43440
uniprot id: Q9LSW7
names: Cofactor
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.

3702:AT4G37650
gene id: 3702:AT4G37650
uniprot id: A0A178UYJ6
uniprot id: Q9SZF7
names: Caution
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Cytoplasm
messages: Early endosome
messages: Expressed in the procambium during embryogenesis.
messages: Expressed in the stele and the quiescent center. Not detected in the ground tissue cell lineage. The SHR protein moves from the stele to a single layer of adjacent cells, where it enters the nucleus.
messages: Interacts with SCR, SCL23, JKD and MGP (PubMed:16640459, PubMed:17446396, PubMed:17785527, PubMed:18500650, PubMed:28211915). Interacts with SIEL (PubMed:21924907). Association to endosomes and intercellular movement of SHR rely on the interaction with SIEL (PubMed:25124761).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Late endosome
messages: Moves via plasmodesmata from the stele into the adjacent cell layer where it locates in the nucleus to controls SCR transcription and endodermis specification. Intact microtubules are required for cell-to-cell trafficking of SHR (PubMed:23294290). This intercellular movement is dependent upon the endosome localized protein SIEL (PubMed:21924907). It is necessary for normal patterning of the root (PubMed:19000160).
messages: Nucleus
messages: Recycling endosome
messages: Transcription factor required for quiescent center cells specification and maintenance of surrounding stem cells, and for the asymmetric cell division involved in radial pattern formation in roots. Essential for both cell division and cell specification. Regulates the radial organization of the shoot axial organs and is required for normal shoot gravitropism. Directly controls the transcription of SCR, and when associated with SCR, of MGP, RLK, TRI, NUC and SCL3.

3702:AT1G79440
gene id: 3702:AT1G79440
uniprot id: A0A654EVI1
uniprot id: Q9SAK4
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the aldehyde dehydrogenase family.
messages: Competitive inhibition by NADH. Inhibited by ATP, ADP and AMP. Redox-regulated. Inhibited under oxydizing conditions (By similarity).
messages: Expressed in developing leaf tissues.
messages: Homotetramer.
messages: Induced during cold (4 degrees Celsius) acclimation (PubMed:17461790). Induced by salt (NaCl) (PubMed:20122158).
messages: Mitochondrion
messages: Mitochondrion matrix
messages: Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species, probably by regulating proline, gamma-hydroxybutyrate (GHB) and gamma-aminobutyrate (GABA) levels (PubMed:15642352). Required for the maintenance of the shoot apical meristem (SAM) structure and subsequent adaxial-abaxial axis-dependent development of cotyledons and leaves (PubMed:21690177, PubMed:25840087).
messages: Plants are sensitive to UVB and heat stress, and accumulate elevated levels of H(2)O(2) (PubMed:12740438). High light-dependent increased of proline, gamma-hydroxybutyrate (GHB) and gamma-aminobutyrate (GABA) levels. Treatment with gamma-vinyl-gamma-aminobutyrate, a specific gamma-aminobutyrate (GABA)-transaminase inhibitor, prevents the accumulation of reactive oxygen intermediates (ROI) and GHB in ssadh mutants, inhibits cell death, and improves growth (PubMed:15642352). The ssadh mutant defects associated with stress responses are suppressed by POP2 disruption (PubMed:18846220). In enf1, pleiotropic developmental defects including dwarfism, and abnormal leaf shape (including abaxialized and adaxialized leaves) and cotyledon associated with altered GABA and SucA levels in shoots; these phenotypes are partially suppressed by the disruption of POP2/GABAT1, GSA1, GSA2 and HEMA1 (PubMed:21690177, PubMed:25840087). Abnormal FIL expression, especially in the adaxial side, in the leaf primordia (PubMed:21690177).

3702:AT5G54070
gene id: 3702:AT5G54070
uniprot id: A0A178UP77
uniprot id: Q9LVW2
names: Developmental Stage
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class A subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: Seed-specific transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). Seems to be specialized for the developmental expression of heat shock protein (HSP) genes during seed maturation. Activated by ABI3.
messages: Starts to be expressed in seeds from 18 days after pollination (DAP) to reach the highest expression in dry seeds. Expression is strongly reduced after only 2 hours of seed imbibition, declines drastically after 6 hours, but can be detected at a very low level even after 10 hours.
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.

3702:AT3G60750
gene id: 3702:AT3G60750
uniprot id: A0A178VEI0
uniprot id: F4JBY2
uniprot id: Q8RWV0
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transketolase family.
messages: Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the reversible transfer of a two-carbon ketol group from fructose-6-phosphate or sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate to yield xylulose-5-phosphate and erythrose-4-phosphate or ribose-5-phosphate, respectively (By similarity). Could act as a stress sensor involved in adaptation process.
messages: Homodimer.
messages: Up-regulated by salt, sorbitol, and abscisic acid (ABA).
messages: chloroplast stroma

3702:AT4G18300
gene id: 3702:AT4G18300
uniprot id: A0A654FQY7
uniprot id: O49733
names: Similarity
messages: Belongs to the eIF-2B gamma/epsilon subunits family.

3702:AT1G69640
gene id: 3702:AT1G69640
uniprot id: A0A178W418
uniprot id: Q8VYI1
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Endoplasmic reticulum membrane
messages: Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Can use C18- and C20-sphinganine as substrates to produce C18- and C20-phytosphinganines (D-ribo-2-amino-1,3,4-trihydroxyoctadecane and -eicosane).
messages: No visible phenotype; due to the redundancy with SBH2. Sbh1 and sbh2 double mutants are severely dwarfed, do not progress from vegetative to reproductive growth and have enhanced expression of programmed cell death associated-genes.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.
messages: Ubiquitous, with higher levels in flowers and roots.

3702:AT1G63640
gene id: 3702:AT1G63640
uniprot id: A0A1P8AT87
uniprot id: A0A1P8ATA6
uniprot id: B3H6Z8
uniprot id: F4I3N9
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.

3702:AT3G53100
gene id: 3702:AT3G53100
uniprot id: A0A654FIF9
uniprot id: Q0WPI9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT4G01830
gene id: 3702:AT4G01830
uniprot id: A0A1P8B7I4
uniprot id: Q9SYI3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT4G10610
gene id: 3702:AT4G10610
uniprot id: Q9S7N9
names: Developmental Stage
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds nucleotic acids in vitro.
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Expressed during early-embryogenesis in the embryo proper and the suspensor up to late heart stage. Expression is not detected in the embryo during maturation.
messages: Expressed in roots, leaves, stems, flowers and siliques. Detected in flowers only in growing organs: gynoecium, petals, stamenal filaments, anther walls and ovules.
messages: Interacts with MPC.
messages: Nucleus

3702:AT4G32430
gene id: 3702:AT4G32430
uniprot id: Q84MA3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT2G04045
gene id: 3702:AT2G04045
uniprot id: Q4VNZ6
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Contains 6 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G06800
gene id: 3702:AT5G06800
uniprot id: A0A2H1ZE52
uniprot id: A0A5S9Y475
uniprot id: Q0WVU3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MYB-CC family.
messages: Nucleus

3702:AT3G55290
gene id: 3702:AT3G55290
uniprot id: A0A654FFZ1
uniprot id: A0A7G2ESZ0
uniprot id: F4JFB9
uniprot id: Q94AL3
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT4G25320
gene id: 3702:AT4G25320
uniprot id: Q9SB31
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in both procambium and xylem precursors of the root meristem. Also detected in the endodermis in the late elongation zone and onwards.
messages: Homodimer. Interacts with AHL4.
messages: Misspecification of tissue boundaries between the xylem and procambium.
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity). Acts redundantly with AHL4 to regulate the formation of tissue boundary between the xylem and procambium in the root meristem (PubMed:23335615).

3702:AT1G18830
gene id: 3702:AT1G18830
uniprot id: A0A1P8AP97
uniprot id: A0A5S9V1Q4
uniprot id: F4ICD9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat SEC31 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Interacts with MAG5, SEC13A and SEC13B.
messages: Required for protein transport from the endoplasmic reticulum to the Golgi apparatus.

3702:AT4G11220
gene id: 3702:AT4G11220
uniprot id: A0A178V3N3
uniprot id: Q9SUT9
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Endoplasmic reticulum membrane
messages: Interacts with VirB2.
messages: Membrane
messages: Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.

3702:AT5G48600
gene id: 3702:AT5G48600
uniprot id: F4K1S1
uniprot id: Q9FJL0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SMC family.
messages: Belongs to the SMC family. SMC4 subfamily.
messages: Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. Also involved in chromosome segregation in meiosis.
messages: Forms a heterodimer with a SMC2 subfamily member. Component of the condensin complex, which contains the SMC2 and SMC4 heterodimer, and three non SMC subunits that probably regulate the complex: CAPH, CAPD2 and CAPG.
messages: Highly expressed in seedlings and inflorescences.
messages: Nucleus
messages: The SMC hinge domain, which separates the large intramolecular coiled coil regions, allows the heterodimerization with a SMC2 subfamily member, forming a V-shaped heterodimer.

3702:AT3G20000
gene id: 3702:AT3G20000
uniprot id: A0A178V9B1
uniprot id: A0A1I9LPN4
uniprot id: Q9LHE5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tom40 family.
messages: Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore. Directly involved in the pore formation.
messages: Expressed in roots, flowers, young cotyledons and leaves.
messages: Forms part of the preprotein translocase complex of the outer mitochondrial membrane (TOM complex) which consists of at least 6 different proteins (TOM5, TOM6, TOM7, TOM20, TOM22/TOM9 and TOM40) (Ref.6). Present in a large lipid-enriched complex called mitochondrial transmembrane lipoprotein (MTL) complex made of proteins located in the two mitochondrial membranes, including the TOM complex and the core components of the MICOS complex and containing at least digalactosyldiacylglycerol (DGDG) (PubMed:26898467). Binds to MIC60 (PubMed:26898467). Component of a mitochondrial large protein complex that contains, at least, MIC60, DGS1, TOM40, TOM20 proteins, and petC/RISP (PubMed:31118221).
messages: Membrane
messages: Mitochondrion outer membrane
messages: Up-regulated after antimycin A or rotenone treatments (PubMed:14730085). Accumulates in the mitochondrial transmembrane lipoprotein (MTL) complex during phosphate (Pi) starvation (PubMed:26898467).

3702:AT1G28090
gene id: 3702:AT1G28090
uniprot id: A0A178W431
uniprot id: A0A178W4S3
uniprot id: A0A1P8ATH4
uniprot id: A0A1P8ATK0
uniprot id: A8MQQ4
uniprot id: B4F7Q8
uniprot id: F4HUW0
names: Caution
names: Similarity
messages: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G29037
gene id: 3702:AT4G29037
uniprot id: A0A1P8B973
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G64190
gene id: 3702:AT1G64190
uniprot id: Q9SH69
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 6-phosphogluconate dehydrogenase family.
messages: Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
messages: Forms homodimer (PubMed:27366940). Forms heterodimers with PGD2 or PGD3 (PubMed:27366940).
messages: chloroplast
messages: cytosol

3702:AT5G67450
gene id: 3702:AT5G67450
uniprot id: Q9SSW1
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By abscisic acid (ABA), ethylene, dehydration, salt and cold.
messages: Highly expressed in roots and at lower levels in leaves and stems.
messages: Nucleus
messages: Plants overexpressing AZF1 have increased sensitivity to salt stress and barely survive under high salt conditions.
messages: Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner.

3702:AT5G30510
gene id: 3702:AT5G30510
uniprot id: Q93VC7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS1 family.
messages: By heat stress (at protein level).
messages: Part of the 30S ribosomal subunit.
messages: Reduced plant size and pale green leaves.
messages: Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs (PubMed:22900828). Involved in cellular heat stress response and required for heat tolerance. Required for transcriptional activation of HSFA2 and its target genes in response to heat stress. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes (PubMed:22570631).
messages: chloroplast

3702:AT1G01340
gene id: 3702:AT1G01340
uniprot id: A0A178W8D7
uniprot id: Q9LNJ0
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: May be due to an intron retention.
messages: Probable cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT2G17250
gene id: 3702:AT2G17250
uniprot id: F4IMH3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CBF/MAK21 family.
messages: Component of the ribosomal small subunit (SSU) processome composed of at least 40 protein subunits and snoRNA U3.
messages: Essential protein required during embryogenesis (PubMed:15266054, PubMed:23382868). Involved in nucleolar processing of ribosomal RNA (rRNA) 40S and 90S ribosomal subunits and ribosome assembly; early in ribosome biogenesis, especially required during the maturation of 5.8S rRNA (PubMed:23382868). Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm (By similarity).
messages: Mostly expressed in flowers and stems and at lower levels in roots, hypocotyls, siliques, leaves and seeds.
messages: Nucleus membrane
messages: Pale seeds with arrested embryo development at the globular stage in homozygous plants (PubMed:15266054, PubMed:23382868). In heterozygous plants, slight accumulation of the 23S-like precursor P-A3 (PubMed:23382868). Altered maturation of 5.8S rRNA with an especially impaired processing at the 5' end (PubMed:23382868).
messages: nucleolus

3702:AT4G24880
gene id: 3702:AT4G24880
uniprot id: A0A1P8B3Z4
uniprot id: Q93ZD6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snurportin family.
messages: Cytoplasm
messages: Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs.
messages: Nucleus

3702:AT4G10020
gene id: 3702:AT4G10020
uniprot id: A0A178UUF0
uniprot id: Q9T0G0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Membrane

3702:AT5G45620
gene id: 3702:AT5G45620
uniprot id: A0A178UQ20
uniprot id: Q8RWF0
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the proteasome subunit S11 family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Ubiquitous with highest expression in flowers.

3702:AT5G13980
gene id: 3702:AT5G13980
uniprot id: A0A5S9Y4L9
uniprot id: F4K5E7
uniprot id: Q8LPJ3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the glycosyl hydrolase 38 family.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: Liberates mannose from p-nitrophenyl-alpha-D-mannoside in vitro.

3702:AT5G66940
gene id: 3702:AT5G66940
uniprot id: A0A654GER4
uniprot id: C0SVW4
uniprot id: Q9FGD6
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

3702:AT1G47260
gene id: 3702:AT1G47260
uniprot id: A0A178WI45
uniprot id: Q9C6B3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the gamma-class carbonic anhydrase family.
messages: Constitutively expressed in roots and leaves, with higher levels in flowers, particularly in tapetal tissue of anthers, inflorescence (IM) and floral meristems (FM).
messages: During flower development, first expressed in anthers and later in seeds.
messages: Enzyme involved in the catabolism of H(2)CO(3) but that does not mediates the reversible hydration of carbon dioxide (PubMed:19808034). Mediates complex I assembly in mitochondria and respiration. Binds HCO(3)-. Required for male fertility during anther development and dehiscence to regulate the secondary thickenings of the endothecial cell wall, probably by modulating H(2)O(2)-dependent lignin polymerization.
messages: Homotrimer. Component of the mitochondrial oxidoreductase respiratory chain complex I; element of the extra matrix-exposed domain, which is attached to the membrane arm of this complex. Interacts with GAMMACAL1 and GAMMACAL2.
messages: Mitochondrion membrane
messages: Reduced levels of complex I and supercomplex I + III(2) in mitochondrion. Reduced growth rates and respiration of suspension cell culture.

3702:AT4G11420
gene id: 3702:AT4G11420
uniprot id: A0A654FN84
uniprot id: Q0WW10
uniprot id: Q9LD55
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit A family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex. Binds to the translation initiation factor TIF3H1 (PubMed:15548739).
messages: Cytoplasm
messages: RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

3702:AT5G07410
gene id: 3702:AT5G07410
uniprot id: Q9LY19
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in mature pollen grains in the anthers and on the stigma. Found in pollen tubes within the style.
messages: cell wall

3702:AT2G29690
gene id: 3702:AT2G29690
uniprot id: P32069
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the anthranilate synthase component I family.
messages: Feedback inhibition by tryptophan.
messages: Heterotetramer consisting of two non-identical subunits: a beta subunit and a large alpha subunit.
messages: Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS to produce anthranilate (By similarity).
messages: chloroplast

3702:AT1G79670
gene id: 3702:AT1G79670
uniprot id: A0A178WG77
uniprot id: F4IF87
uniprot id: Q8RY17
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.
messages: The EGF-like region is specific to this family of proteins and seems to consist of the C-terminal of an EGF-like domain fused to the N-terminal of another one.

3702:AT1G68450
gene id: 3702:AT1G68450
uniprot id: Q9CA36
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: May be involved in chloroplast development.
messages: Pale-green and stunted growth phenotypes.
messages: chloroplast

3702:AT1G59750
gene id: 3702:AT1G59750
uniprot id: A0A5S9WNB3
uniprot id: A0A654EJH5
uniprot id: B9DGM9
uniprot id: F4ID31
uniprot id: Q8L7G0
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Promotes flowering, stamen development, floral organ abscission and fruit dehiscence. Acts as repressor of IAA2, IAA3 and IAA7. Together with RIN13, promotes leaf senescence and cell death (PubMed:32446355).
messages: Belongs to the ARF family.
messages: Cytoplasm
messages: Expressed in the sepals and carpels of young flower buds. At stage 10 of flower development, expression in the carpels becomes restricted to the style. Also expressed in anthers and filaments. At stage 13, expressed in the region at the top of the pedicel, including the abscission zone.
messages: Expressed in the whole plant.
messages: Homodimers and heterodimers.
messages: Homodimers and heterodimers. Interacts with the auxin-responsive proteins IAA12, IAA13, IAA17 and with ARF2. Binds to RIN13 in the nucleus (PubMed:32446355).
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: May be due to a competing acceptor splice site.
messages: Nucleus

3702:AT3G48560
gene id: 3702:AT3G48560
uniprot id: P17597
names: Activity Regulation
names: Biotechnology
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TPP enzyme family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis.
messages: Homodimer or homotetramer. The acetolactate synthase complex contains both large catalytic subunits and small regulatory subunits (PubMed:16407096, PubMed:19187232, PubMed:9355748). Homodimer (PubMed:32640464). The acetolactate synthase complex contains 4 homodimers of the large catalytic subunits, and 1 homotetramer of the small regulatory subunits (PubMed:32640464).
messages: Inhibited by asymmetric aryl disulfides, triazolopyrimidine sulfonanilide compounds, isatin derivatives, and sulfonylurea and imidazolinone herbicides. Insensitive to feed-back inhibition by branched-chain amino acids.
messages: Introduced by genetic manipulation and expressed in sulfonylurea resistant plants.
messages: Lethal when homozygous.
messages: chloroplast

3702:AT3G43660
gene id: 3702:AT3G43660
uniprot id: Q9M2C0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CCC1 family.
messages: Not down-regulated under iron deficiency.
messages: Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.
messages: Vacuole membrane

3702:AT2G32885
gene id: 3702:AT2G32885
uniprot id: A0A178VWE6
uniprot id: A8MR00
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT5G25520
gene id: 3702:AT5G25520
uniprot id: A0A384LKH0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G40780
gene id: 3702:AT5G40780
uniprot id: Q9FKS8
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Amino acid-proton symporter. Transporter with a broad specificity for histidine, lysine, glutamic acid, alanine, serine, proline and glycine. Involved in both apoplastic transport of amino acids in leaves and their uptake by roots.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: By amino acids.
messages: Cell membrane
messages: Expressed in roots, stems, flowers, leaves, siliques and pollen. Found in the tips of roots and in the rhizodermis of emerging roots and in lateral roots. Higher expression in older leaves as compared to joung leaves. Detected first at the hydathodes, then in the epidermis and finally in matures leaves in all mesophyll cells. Not detected in vascular bundles or in seeds.
messages: Inhibited by carbonlycyanide m-chlorophenylhydrazone (CCCP) and DEPC.
messages: Lower biomass at the time of harvest, but no visible phenotype until bolting. Decreased uptake of L-histidine, L-glutamine, glutamic acid, L-serine, glycine, L-asparagine, aspartic acid, L-proline and L- or D-alanine.
messages: PubMed:9390441 shows a high affinity for lysine while PubMed:16816136 and PubMed:17293438 found no significant transport of this amino acid.

3702:AT1G07250
gene id: 3702:AT1G07250
uniprot id: A0A384KNH2
uniprot id: Q9LML6
uniprot id: W8QPB7
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives.

3702:AT4G03550
gene id: 3702:AT4G03550
uniprot id: Q9ZT82
uniprot id: W8PV73
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 48 family.
messages: By salicylic acid (SA).
messages: Cell membrane
messages: Highly expressed in flowers. Expressed at low levels in roots, leaves, stems, cauline leaves and siliques.
messages: Involved in sporophytic and gametophytic development. Required for normal leaf development. During pollen formation, required for the formation of the callose wall separating the tetraspores of the tetrad (interstitial wall), but not for the callose wall surrounding the pollen mother cells (peripheral wall). Functionally redudant to CALS11 (GSL1). May play a role later in pollen grain maturation. Required for callose formation induced by wounding and pathogen attack. May interfere with salicylic acid-induced signaling pathway during defense response. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.
messages: Membrane
messages: Plants develop smaller leaves, and collapsed and inviable pollen grains. They are resistant to the biotrophic pathogens Erysiphe cichoracearum (powdery mildew), E.orontii and Hyaloperonospora parasitica.

3702:AT1G55240
gene id: 3702:AT1G55240
uniprot id: Q6NM31
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM45 family.
messages: Membrane

3702:AT5G16270
gene id: 3702:AT5G16270
uniprot id: Q8W1Y0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the rad21 family.
messages: Component of the cohesin complex.
messages: Decreased sister chromatid alignment along arms in tetraploid cells (4C) nuclei and impaired sister centromere cohesion, associated with a high frequency of anaphases with bridges. Slightly slower development leading to delayed flowering.
messages: Expressed in tissues containing dividing cells such as seedlings, flower buds, flowers and inflorescence meristem tissue.
messages: Involved in sister chromatid and centromere cohesion during mitosis.
messages: Nucleus
messages: centromere

3702:AT3G51200
gene id: 3702:AT3G51200
uniprot id: A0A654FEX4
uniprot id: Q9SD26
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT4G38160
gene id: 3702:AT4G38160
uniprot id: A0A654FWN3
uniprot id: F4JSY9
uniprot id: F4JSZ0
uniprot id: Q9SZL6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mTERF family.
messages: Mitochondrion
messages: Small white seeds, with defective choloroplasts, that are unable to germinate on soil. Albino seedlings that die rapidly when grown on synthetic medium.
messages: Transcription termination factor essential for chloroplast development. Required for maturation of 16S rRNA, 18S rRNA and 23S rRNA in the chloroplast. Binds to a specific region within the tRNA(Ile)(GAU) gene at a position adjacent to and downstream of the 16S rRNA gene. Required for the maturation of tRNA(Ile)(GAU). Binds to double-stranded DNA.
messages: chloroplast

3702:AT4G08560
gene id: 3702:AT4G08560
uniprot id: P0DN94
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G23220
gene id: 3702:AT1G23220
uniprot id: A0A178WMH3
uniprot id: Q9LR39
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dynein light chain family.
messages: cytoskeleton

3702:AT5G16010
gene id: 3702:AT5G16010
uniprot id: Q9LFS3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the steroid 5-alpha reductase family.
messages: Membrane

3702:AT5G64330
gene id: 3702:AT5G64330
uniprot id: A0A178UIP8
uniprot id: A0A1P8BBW9
uniprot id: A0A2H1ZE95
uniprot id: Q9FMF5
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NPH3 family.
messages: Cell membrane
messages: Expressed in hypocotyls, guard cells and mesophyll cells.
messages: Impaired leaf flattening and slight epinasty when grown under blue light.
messages: In the root, up-regulated by red light.
messages: Interacts with PKS1, PKS2, RPT2, PHOT1 and PHOT2 (PubMed:10542152, PubMed:15031408, PubMed:16777956, PubMed:20071603). Subunit of a complex made of CAR6, PHOT1 and RPT3/NPH3 (PubMed:21367967).
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Signal transducer of the phototropic response and photo-induced movements. Involved in the phot1 pathway under low blue light (LBL) fluence rate and in the phot2 pathway under higher fluence rate of blue light (HBL). Necessary for root and hypocotyl phototropisms, but not for the regulation of stomata opening. Not involved in chloroplast accumulation and translocation.
messages: May be due to an intron retention.
messages: Phosphorylated in the dark.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G47460
gene id: 3702:AT3G47460
uniprot id: A0A1I9LLC4
uniprot id: Q9SN90
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SMC family. SMC2 subfamily.
messages: Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. Also involved in chromosome segregation in meiosis.
messages: Forms a heterodimer with SMC4. Component of the condensin complex, which contains the SMC2 and SMC4 heterodimer, and three non SMC subunits that probably regulate the complex: CAPH, CAPD2 and CAPG.
messages: Highly expressed in roots and young floral buds.
messages: Nucleus
messages: The SMC hinge domain, which separates the large intramolecular coiled coil regions, allows the heterodimerization with SMC4, forming a V-shaped heterodimer.

3702:AT4G18600
gene id: 3702:AT4G18600
uniprot id: A0A1P8B4R2
uniprot id: A0A1P8B4R7
uniprot id: A0A1P8B4S1
uniprot id: A0A1P8B4T4
uniprot id: Q5XPK0
names: Domain
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the SCAR/WAVE family.
messages: Contains the N-terminal Scar homology domain (SHD), but unlike the genuine SCAR proteins, lacks the C-terminal VCA (verprolin homology/cofilin homology/acidic) domain.
messages: Expressed in expanding cotyledons, expanding leaves and expanding siliques containing developing embryos. Detected in unopened flower buds. Reduced expression in mature leaves.
messages: Interacts with ABI1 and ABI2.

3702:AT2G22475
gene id: 3702:AT2G22475
uniprot id: A0A5S9X075
uniprot id: Q8S8F8
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the GEM family.
messages: Interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GLABRA2-dependent cell fate decision.
messages: Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. Could be part of a complex that negatively modulates GLABRA2 and CAPRICE expression via the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC promoters.
messages: May be due to intron retention.
messages: Ubiquitous.

3702:AT3G05790
gene id: 3702:AT3G05790
uniprot id: A0A1I9LLK4
uniprot id: Q9M9L7
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: Homohexamer or homoheptamer. Organized in a ring with a central cavity.
messages: Mitochondrion matrix
messages: This protein may be expected to contain an N-terminal transit peptide but none has been predicted.
messages: chloroplast thylakoid membrane

3702:AT5G06910
gene id: 3702:AT5G06910
uniprot id: Q9FL54
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DnaJ family. C/III subfamily.
messages: Highly expressed in leaves, flowers and siliques, and to lower extent in roots.
messages: Nucleus
messages: Plays a continuous role in plant development probably in the structural organization of compartments.

3702:AT5G53500
gene id: 3702:AT5G53500
uniprot id: A0A384KC58
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G04340
gene id: 3702:AT5G04340
uniprot id: O22533
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
messages: By cold treatment and during Pi starvation.
messages: Nucleus
messages: Probable transcription factor that regulates root development and phosphate (Pi) acquisition and homeostasis. Probably acts as a repressor of primary root growth and regulates Pi homeostasis through the control of root architecture.
messages: Seeds silencing ZAT6 fail to germinate. Plants overexpressing ZAT6 have retarded growth with smaller primary roots and fewer leaves.

3702:AT1G09020
gene id: 3702:AT1G09020
uniprot id: Q944A6
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the 5'-AMP-activated protein kinase gamma subunit family.
messages: Cytoplasm
messages: Kinase-interacting sequence (KIS) is required for interaction with KIN10 or KIN11.
messages: May be due to an intron retention.
messages: Nucleus
messages: Preferentially expressed in dividing cells, as well as in shoot apex and flower buds, but expressed at a lower level in differentiated tissues of roots, and leaves of rosette and inflorescence.
messages: Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants.
messages: Subunit of a probable heterotrimeric complex consisting of an alpha catalytic (KIN10 or KIN11) subunit, and a beta (KINB) and a gamma (KING or SNF4) non-catalytic regulatory subunits (PubMed:17028154, PubMed:25736509). Interacts with KIN10, KIN11, KINB1, KINB2, KINB3, HSPRO1 and HSPRO2. Interacts with BZIP63 (PubMed:26263501). Interacts with FLZ2, FLZ8 and FLZ13 (PubMed:29945970).

3702:AT5G64770
gene id: 3702:AT5G64770
uniprot id: Q9FGF6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Golven' means irregular waves in Dutch.
messages: Absent from the primary root (PubMed:23370719). Induced during lateral root formation after the emergence of the primordium and in mature lateral roots (PubMed:23370719). Expressed homogeneously across the cotyledon (PubMed:23370719). In leaves, expressed in the whole lamina, with a stronger signal in the outer part of the leaf (PubMed:23370719). Higher levels in younger leaves and fades out as leaves expand (PubMed:23370719). Observed in the stem and sepals, and in the gynoecium of the developing flowers, and later in siliques (PubMed:23370719). During seedling gravitropic response, restricted to the epidermis and cortex and enhanced at the lower side of the reoriented hypocotyl (PubMed:22421050).
messages: Belongs to the RGF family.
messages: Binds to LRR receptor-like serine/threonine-protein kinases to trigger their dimerization with SERK proteins and subsequent signaling.
messages: Endoplasmic reticulum
messages: Expressed in siliques, stems, hypocotyls, shoot apex, leaves, flowers and cotyledons, and, to a lower extent, in roots.
messages: Rapidly induced by auxin.
messages: Reduced hypocotyl bending and dose-dependent altered root gravitropism with an impaired formation of auxin gradients, thus leading to an irregular waves root shape.
messages: Secreted
messages: Signaling peptide (root growth factor) that regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (PubMed:22307643, PubMed:23370719). Also involved in the regulation of hypocotyl bending and root gravitropism, probably by influencing the formation of auxin gradients (PubMed:22421050). Maintains the postembryonic root stem cell niche (PubMed:20798316).

3702:AT5G40440
gene id: 3702:AT5G40440
uniprot id: A0A1P8BGC3
uniprot id: O80396
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily.
messages: By Pseudomonas syringae pv tomato strain DC3000 infection.
messages: Cytoplasm
messages: Interacts with MPK1, MPK2 and MPK7 (PubMed:17933903, PubMed:19513235, PubMed:25680457). Interacts with P.syringae type III effector HopF2 (PubMed:20571112). Interacts with MPK14 (PubMed:19513235). Binds to MAPKKK17 and MAPKKK18 (PubMed:25720833, PubMed:25680457). Binds to MAPKKK20 (PubMed:28848569, PubMed:30081740).
messages: MKK3-MPK6 module plays an important role in the jasmonate signal transduction pathway through the negative regulation of MYC2/JIN1 expression. Activates by phosphorylation the downstream MPK6, MPK7 and MPK8. MKK3-MPK7 module acts as a positive regulator of PR1 gene expression. MKK3-MPK8 module negatively regulates ROS accumulation through controlling expression of the RBOHD gene. Component of the abscisic acid (ABA) signaling pathway that may act as ABA signal transducer in the context of abiotic stresses. Activator of the C group MAP kinases. Activates MPK7 in response to ABA (PubMed:25720833). Mitogen-activated protein kinase (MAPK) that is specifically regulated by MAPKKK20 and mediates signaling that regulates cortical microtubule functions (PubMed:28848569).
messages: More sensitive to Pseudomonas syringae pv. tomato DC3000 infection (PubMed:17933903). Hypersensitivity to abscisic acid (ABA) in germination and root elongation (PubMed:25720833). Short roots with abnormal twisting (e.g. leftward skewing) in media containing microtubule-disrupting drugs (e.g. oryzalin) (PubMed:28848569).
messages: Mostly expressed in leaves, and, to a lower extent, in roots, seedlings, flower buds, flowers and siliques.
messages: Nucleus
messages: Phosphorylation at Ser-235 and Thr-241 by MAP kinase kinase kinases positively regulates kinase activity (Probable). Phosphorylated by MAPKKK20 (PubMed:28848569).

3702:AT4G39900
gene id: 3702:AT4G39900
uniprot id: A0A178UYF2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G23390
gene id: 3702:AT3G23390
uniprot id: A0A178VAG2
uniprot id: O23290
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL42 family.

3702:AT5G04670
gene id: 3702:AT5G04670
uniprot id: A0A5S9Y1F2
uniprot id: Q9LZ30
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enhancer of polycomb family.
messages: Nucleus

3702:AT5G35410
gene id: 3702:AT5G35410
uniprot id: A0A1P8BGJ7
uniprot id: A0A384KKJ4
uniprot id: M5BEH1
uniprot id: Q9LDI3
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: Cytoplasm
messages: Interacts with CBL1, CBL2, CBL4/SOS3, CBL5, CBL9, CBL10 and with the protein phosphatase 2C ABI2.
messages: Involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Activates the vacuolar H(+)/Ca(2+) antiporter CAX1 and operates in synergy with CBL4/SOS3 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Phosphorylates CBL1, CBL4 and CBL10.
messages: Nucleus
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases. The C-terminal part (309-446) of the protein is required for the phosphorylation of CBL, but is not involved in autophosphorylation.
messages: Up-regulated in roots by salt stress.

3702:AT3G53360
gene id: 3702:AT3G53360
uniprot id: Q9LFI1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT1G32870
gene id: 3702:AT1G32870
uniprot id: A0A178W4V5
uniprot id: F4IED2
names: Caution
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By heat, salt stress, abscisic acid (ABA) and methyl methanesulfonate (MMS) treatment.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, rosette leaves, shoot apex, stems and flowers.
messages: Interacts with RCD1.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Involved in oxidative stress tolerance by mediating regulation of mitochondrial retrograde signaling during mitochondrial dysfunction. Interacts directly with the mitochondrial dysfunction DNA consensus motif 5'-CTTGNNNNNCA[AC]G-3', a cis-regulatory elements of several mitochondrial retrograde regulation-induced genes, and triggers increased oxidative stress tolerance.

3702:AT4G22150
gene id: 3702:AT4G22150
uniprot id: Q9SUG6
names: Subunit
messages: Interacts with CDC48A.

3702:AT4G10480
gene id: 3702:AT4G10480
uniprot id: A0A384KL47
uniprot id: A8MQP6
uniprot id: Q0WWN5
uniprot id: Q9SZY1
names: Function
names: Similarity
messages: Belongs to the NAC-alpha family.
messages: May promote appropriate targeting of ribosome-nascent polypeptide complexes.

3702:AT1G64070
gene id: 3702:AT1G64070
uniprot id: F4I594
names: Disruption Phenotype
names: Domain
names: Function
messages: No visible phenotype under normal growth conditions, but mutant plants are susceptible to the pathogen Leptosphaeria maculans.
messages: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Leptosphaeria maculans (blackleg disease).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT2G01750
gene id: 3702:AT2G01750
uniprot id: A0A178VTP6
uniprot id: F4IPB2
uniprot id: Q9ZUA3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MAP70 family.
messages: Plant-specific protein that interact with microtubules.
messages: cytoskeleton

3702:AT3G62110
gene id: 3702:AT3G62110
uniprot id: A0A654FJY5
uniprot id: Q9FPJ2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT1G63350
gene id: 3702:AT1G63350
uniprot id: Q9C8T9
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Potential disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT5G05370
gene id: 3702:AT5G05370
uniprot id: A0A178UEI2
uniprot id: Q9FLB7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UQCRQ/QCR8 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT2G38310
gene id: 3702:AT2G38310
uniprot id: A0A654F1B1
uniprot id: O80920
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Membrane
messages: Monomer (PubMed:21658606). Homodimer. Binds ABA on one subunit only (By similarity). Interacts with HAB1, ABI1 and ABI2, and possibly with other PP2Cs (PubMed:19407142, PubMed:19874541, PubMed:19898420). Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus. Interacts directly with CAR1 and CAR4 (PubMed:25465408). Interacts with TOPP1 (PubMed:26943172). Interacts with DDA1 (PubMed:24563205). Interacts with FREE1 (via N-terminus) (PubMed:27495812). Interacts with the E3 ubiquitin-protein ligase RSL1 at the plasma membrane (PubMed:25330042).
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA (PubMed:19624469, PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015).
messages: Ubiquitynated and degraded by the proteasome upon binding to the E3 ubiquitin-protein ligase RSL1 at the plasma membrane.
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.
messages: Vacuole

3702:AT5G03270
gene id: 3702:AT5G03270
uniprot id: A0A178UQW2
uniprot id: A0A1P8BDD2
uniprot id: Q9LYV8
names: Function
names: Similarity
messages: Belongs to the LOG family.
messages: Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (By similarity).
messages: Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.

3702:AT1G34210
gene id: 3702:AT1G34210
uniprot id: A0A5S9WIQ1
uniprot id: Q9XIC7
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in flowers, tapetum, developing microspores, all cells of the embryo sac, provascular strands and developing vascular bundles. Low expression in adult vascular tissue.
messages: Homo- and heterodimer. Component of the SERK1 signaling complex, composed of KAPP, CDC48A, GRF6 or GRF7, SERK1, SERK2, SERK3/BAK1 and BRI1 (By similarity). Bind to BRI1 in a brassinolide-dependent manner (By similarity). Heterodimer with PSKR1 (PubMed:26308901). Interacts with the EF-Tu receptor EFR and FLS2 in a specific ligand-induced manner. Interacts with ERECTA in a EPF2-induced manner. Interacts with ERL1 in a EPF1-induced manner. Interacts with TMM (PubMed:26320950). In the presence of the signal peptide RGF1, interacts with RGI3/RGFR1 and RGI4/RGFR2/SKM2 (PubMed:27229311). Binds to the peptide CLE44 in the presence of TDR (PubMed:27449136).
messages: No visible phenotype. Serk1 and serk2 double mutants are completely male sterile due to a failure in tapetum specification.
messages: Serine/threonine-kinase involved in brassinosteroid-dependent and -independent signaling pathways. Acts redundantly with SERK1 as a control point for sporophytic development controlling male gametophyte production (PubMed:18667726). Serves as coreceptor to small peptide (e.g. RGF1 and CLE44) signaling (Probable). Involved in the perception of phytosulfokine and subsequent signal transduction (PubMed:26308901).

3702:AT5G14060
gene id: 3702:AT5G14060
uniprot id: A0A178UPF4
uniprot id: A0A1P8BBD5
uniprot id: O23653
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Allosterically inhibited by lysine, but not by S-adenosyl-L-methionine (SAM). K(0.5) for lysine in the presence of physiological concentrations of substrates is 12.5 uM. No inhibition by threonine or leucine and no activation or inhibition by alanine, cysteine, isoleucine, serine, valine, methionine, glutamine, asparagine, glutamic acid or arginine.
messages: Belongs to the aspartokinase family.
messages: Expressed in stems, leaves, floral organs and young seedlings.
messages: Involved in the first step of essential amino acids lysine, threonine, methionine and isoleucine synthesis via the aspartate-family pathway.
messages: chloroplast

3702:AT4G35180
gene id: 3702:AT4G35180
uniprot id: Q84WE9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Amino acid transporter.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane

3702:AT3G55500
gene id: 3702:AT3G55500
uniprot id: A0A7G2EUB2
uniprot id: Q9M2S9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Membrane
messages: cell wall

3702:AT1G63080
gene id: 3702:AT1G63080
uniprot id: Q9CAN5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT2G18170
gene id: 3702:AT2G18170
uniprot id: A0A7G2E749
uniprot id: Q0WMN0
uniprot id: Q39027
names: Activity Regulation
names: Domain
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Activated by threonine and tyrosine phosphorylation (By similarity). Activated in response to hydrogen peroxide. Activation is triggered by MAPKKK17 and MAPKKK18 in a MKK3-dependent manner (PubMed:25720833).
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-191 and Tyr-193, which activates the enzyme.
messages: Interacts with MKK3.
messages: MKK3-MPK7 module acts as a positive regulator of PR1 gene expression.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT1G49630
gene id: 3702:AT1G49630
uniprot id: Q8VY06
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: ATP-independent protease that degrades both mitochondrial and chloroplastic transit peptides after their cleavage. Also degrades other unstructured peptides. Specific for peptides in the range of 10 to 65 residues. Shows a preference for cleavage after small polar residues and before basic residues, but without any positional preference.
messages: Belongs to the peptidase M16 family. PreP subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 cations, such as magnesium or calcium, per subunit.
messages: Completely inhibited by the metal chelator orthophenanthroline.
messages: Expressed in leaves, flowers and roots, but not detected in siliques and shoots.
messages: Homodimer.
messages: Mitochondrion matrix
messages: chloroplast stroma

3702:AT1G80245
gene id: 3702:AT1G80245
uniprot id: A0A384K9Z6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G52200
gene id: 3702:AT5G52200
uniprot id: Q9LTK0
names: Disruption Phenotype
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Expressed in roots, cotyledons, leaves, flowers and siliques.
messages: Inhibitor of protein-phosphatase 1 (PP1). Binds to and inhibits PP1 activity (PubMed:21222654, PubMed:26943172). Acts as negative regulator of abscisic acid (ABA) signaling. Enhances the inhibition of SRK2E/SNRK2.6 by TOPP1. May promote the interaction between TOPP1 and the ABA receptor PYL11 (PubMed:26943172).
messages: Interacts with protein phosphatase 1 (PubMed:21222654). Interacts with TOPP1, SRK2D/SNRK2.2, SRK2I/SNRK2.3, SRK2E/SNRK2.6, SRK2C/SNRK2.8 and PYL11 (PubMed:26943172).
messages: No visible phenotype under normal growth conditions, but mutant seedlings exhibit hypersensitivity to abscisic acid (ABA) or salt treatments.
messages: Nucleus
messages: Phosphorylated in vivo.

3702:AT1G76060
gene id: 3702:AT1G76060
uniprot id: Q63Z96
names: Subcellular Location Annotation
messages: Mitochondrion matrix

3702:AT5G62540
gene id: 3702:AT5G62540
uniprot id: A0A178ULQ4
uniprot id: P42746
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Expressed in all tissues examined. Lower levels found in leaves.
messages: Up-regulated by syringolin, a cell death-inducing chemical, but not induced by heat shock.

3702:AT4G36070
gene id: 3702:AT4G36070
uniprot id: Q1PE17
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (337-367) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT5G46850
gene id: 3702:AT5G46850
uniprot id: A0A654G8L5
uniprot id: F4KIV8
uniprot id: F4KIW0
uniprot id: Q9LUK5
names: Similarity
messages: Belongs to the PIGX family.

3702:AT1G69910
gene id: 3702:AT1G69910
uniprot id: F4I3V3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G24290
gene id: 3702:AT1G24290
uniprot id: O48696
names: Similarity
messages: Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.

3702:AT3G12830
gene id: 3702:AT3G12830
uniprot id: A0A178VDU5
uniprot id: Q9LTV3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARG7 family.
messages: Cytoplasm
messages: Highly expressed in the steles of roots and hypocotyls.
messages: Interacts with and inhibits PP2C-D subfamily of type 2C phosphatases such as PP2C67/PP2C-D1.
messages: Provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), and triggers PM H(+)-ATPases activity by promoting phosphorylation of their C-terminal autoinhibitory domain as a result of PP2C-D subfamily of type 2C phosphatases inhibition, thus leading to the acidification of the apoplast and the facilitation of solutes and water uptake to drive cell expansion (PubMed:24858935). Plays a role in the regulation of cell expansion, root meristem patterning and auxin transport (By similarity).

3702:AT1G12740
gene id: 3702:AT1G12740
uniprot id: F4IDV9
uniprot id: Q6NPN1
uniprot id: Q9LN73
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G46030
gene id: 3702:AT3G46030
uniprot id: A0A384L1F0
uniprot id: Q1H5F9
uniprot id: Q9LZT0
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK6ac, H2BK11ac, H2BK22ac, H2BK27ac H2BK33ac and H2BK34ac.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Mono-, di- or trimethylated at the N-terminus to form H2BA1me1/2/3. H2BA1me2 and H2BA1me3 may be methylated and/or acetylated to form H2BA1me2K3me1, H2BA1me2K3me1K6ac, H2BA1me2K6ac H2BA1me3K6ac, H2BA1me3K6acK11ac and H2BA1me2K3me1K6acK11ac.
messages: Monoubiquitinated by BRE1 to form H2BK143ub1 and deubiquitinated by UBP26. Required for heterochromatic histone H3 di- and trimethylation at H3K4me. May give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BA1me1/2/3 = mono-, di- and trimethylated Ala-2; H2BK3me1 = monomethylated Lys-4; H2BK6ac = acetylated Lys-7; H2BK11ac = acetylated Lys-12; H2BK22ac = acetylated Lys-23; H2BK27ac = acetylated Lys-28; H2BK33ac = acetylated Lys-34; H2BK34ac = acetylated Lys-35; H2BK143ub1 = monoubiquitinated Lys-141.

3702:AT5G41170
gene id: 3702:AT5G41170
uniprot id: Q9FLL3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G78240
gene id: 3702:AT1G78240
uniprot id: A0A654ERM6
uniprot id: Q9C9Q8
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily.
messages: Co-expressed with the galacturonosyltransferase GAUT8/QUASIMODO1.
messages: Deformed dwarf phenotype and reduced cell adhesion. Hypersensitive to imbalanced C:N ratio.
messages: Golgi apparatus membrane
messages: May be involved in the synthesis of homogalacturonan. Required for normal cell adhesion and plant development.
messages: Membrane
messages: Ubiquitous.

3702:AT5G04040
gene id: 3702:AT5G04040
uniprot id: A0A178UB07
uniprot id: Q9LZA6
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PLPL family.
messages: Expressed in roots, leaves and stems.
messages: Inhibited by diethyl-p-nitrophenyl phosphate, diisopropyl fluorophosphate and [E]-6-[bromoethylene]-3-[1-naphthalenyl]-2H-tetrahydropyran-2-one.
messages: Involved in the release of fatty acids from the oil body in germinating seedlings (PubMed:16473965, PubMed:19136267, PubMed:27466365). Can hydrolyze triacylglycerols and diacylglycerols but not monoacylglycerols, phospholipids, galactolipids or cholesterol esters (PubMed:16473965, PubMed:19136267). SDP1 lipase activity is required to limit triacylglycerol accumulation in roots, leaves and stems, which are vegetative tissues (PubMed:23686420). Functions synergistically with PDAT1 in regulating fatty acid flow from membrane lipid synthesis toward peroxisomal beta-oxidation through a transient triacylglycerol pool (PubMed:25293755).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Lipid droplet
messages: Membrane
messages: Not impaired in germination, but much slower rate of postgerminative growth.
messages: Peroxisome
messages: Transcript levels do not correlate positively with enzyme activity, suggesting a post-transcriptional regulation.
messages: Transcript levels increase at the beginning of seed maturation and remain high until seed desiccation is completed. High levels early in seed imbibition, but decline as the seed germinates.

3702:AT1G77300
gene id: 3702:AT1G77300
uniprot id: F4I6Z9
uniprot id: Q2LAE1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
messages: Early flowering. Pleiotropic developmental effects including dwarf and bushy phenotype, reduced seed setting and defects in ovule and embryo sac development (PubMed:18070919, PubMed:19915673, PubMed:24838002). Altered responses to brassinosteroid (BR) (PubMed:24838002).
messages: Histone methyltransferase involved in di and tri-methylation of 'Lys-36' of histone H3 (H3K36me2 and H3K36me3). Binds to H3 already mono- or di-methylated on 'Lys-4'(H3K4me1 or H3K4me2), but not to H3K4me3. H3K4me and H3K36me represent specific tags for epigenetic transcriptional activation. Regulates positively FLC transcription to prevent early flowering transition. Required for flowering transition in response to vernalization and for the maintenance of FLC expression in late embryos, but dispensable for the initial reactivation in early embryos during reprogramming. Seems also to modulate several traits including floral organ size, root size and dormancy. Promotes apical dominance (PubMed:16299497, PubMed:10518493, PubMed:16258034, PubMed:18070919, PubMed:19915673, PubMed:20711170). Directly involved in the tri-methylation of 'Lys-36' of histone H3 (H3K36me3) at LAZ5 chromatin to maintain a transcriptionally active state of LAZ5, a TIR-NB-LRR protein involved in innate immunity (PubMed:20949080). Required for brassinosteroid (BR)-induced gene expression and histone H3 trimethylation on 'Lys-36' (H3K36me3) in BR-regulated genes (PubMed:24838002).
messages: Interacts with FRI and SUF4, two components of the transcription activator complex FRI-C, and with SWC6, a component of the SWR1 chromatin-remodeling complex (PubMed:20711170, PubMed:21282526, PubMed:21522130). Interacts with BZR2/BES1 and IWS1 (PubMed:24838002).
messages: Not regulated by vernalization.
messages: Nucleus
messages: Ubiquitous, with higher levels in young tissues, including shoot and root apex. Expressed in ovules, tapetum layer and microspores.
messages: centromere

3702:AT5G23550
gene id: 3702:AT5G23550
uniprot id: A0A178UHA4
uniprot id: Q9LT07
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFT2 family.
messages: May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.
messages: Membrane

3702:AT4G00520
gene id: 3702:AT4G00520
uniprot id: B3H5Z2
uniprot id: Q5FYU1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the C/M/P thioester hydrolase family.
messages: Catalyzes the hydrolysis of acyl-CoAs into free fatty acids and coenzyme A (CoASH), regulating their respective intracellular levels (By similarity). Active with both medium chain and long chain acyl-CoAs as substrates (By similarity).
messages: Homotetramer.
messages: Peroxisome matrix

3702:AT2G45430
gene id: 3702:AT2G45430
uniprot id: A0A178VXD2
uniprot id: O22130
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed at the hypocotyl-root transition zone and the root hair zone. Also detected in the inflorescence.
messages: Highly expressed in earlier growth stages in hypocotyls, roots and the vascular bundles of the leaves. Detected later in the vascular bundles of the basal leaves aera.
messages: Homodimer. Interacts with HDA1/HDA19, HDA6 and HDA9.
messages: Nucleus
messages: Overexpression of AHL22 results in delayed flowering and inhibition of hypocotyl growth.
messages: Slightly longer hypocotyls.
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). Binds an AT-rich DNA sequences in the FLOWERING LOCUS T (FT) promoter (PubMed:22442143). Acts redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering and regulation of the hypocotyl elongation. Plays a role in both photo- and skotomorphogenesis (PubMed:19517252). Acts as a chromatin remodeling factor that modifies the architecture of FLOWERING LOCUS T (FT) chromatin by modulating both H3 acetylation and methylation leading to the regulation of FT expression during flowering induction (PubMed:22442143).

3702:AT3G43750
gene id: 3702:AT3G43750
uniprot id: Q9LZH2
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT3G32040
gene id: 3702:AT3G32040
uniprot id: Q9LHR4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.
messages: Monomer.
messages: chloroplast

3702:AT2G28355
gene id: 3702:AT2G28355
uniprot id: A0A178VT26
uniprot id: Q8S8H3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G30660
gene id: 3702:AT2G30660
uniprot id: A0A1P8B0L8
uniprot id: A0A7G2EEC8
uniprot id: Q6NMB0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism.
messages: Involved in valine catabolism.
messages: Peroxisome

3702:AT5G47810
gene id: 3702:AT5G47810
uniprot id: Q9FIK0
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Allosterically activated by AMP.
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Homotetramer.
messages: Mostly expressed in roots and stems.

3702:AT2G02780
gene id: 3702:AT2G02780
uniprot id: C0LGJ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G06490
gene id: 3702:AT1G06490
uniprot id: A0A384L982
uniprot id: E9KSP0
uniprot id: Q9SHJ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 48 family.
messages: Cell membrane
messages: Involved in callose synthesis at the forming cell plate during cytokinesis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals (By similarity).
messages: Membrane

3702:AT2G16740
gene id: 3702:AT2G16740
uniprot id: A0A178VQZ9
uniprot id: Q9SLE4
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT1G21730
gene id: 3702:AT1G21730
uniprot id: Q8W5R6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
messages: Mitochondrion

3702:AT1G23540
gene id: 3702:AT1G23540
uniprot id: A0A1P8AM77
uniprot id: A0A5S9VNL5
uniprot id: Q9ZUE0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Mostly expressed in apical parts, including flower buds, and particularly in anthers. Also present in root hairs.
messages: Regulates the auxin-related MAX (More Axillary Growth) pathway during the shoot branching.
messages: Repressed by auxin (IAA) treatment.

3702:AT1G66040
gene id: 3702:AT1G66040
uniprot id: A0A7G2E6T4
uniprot id: Q9C8E1
names: Domain
names: Function
names: Subcellular Location Annotation
messages: E3 ubiquitin-protein ligase. May participate in CpG methylation-dependent transcriptional regulation (By similarity).
messages: Multi domain E3 ubiquitin ligase that also plays a role in DNA methylation and histone modifications.
messages: Nucleus
messages: The RING fingers are required for ubiquitin ligase activity.
messages: The YDG domain mediates the interaction with histone H3.

3702:AT1G49810
gene id: 3702:AT1G49810
uniprot id: A0A654EH64
uniprot id: Q9C6D3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NhaD Na(+)/H(+) (TC 2.A.62) antiporter family.
messages: Membrane
messages: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons.

3702:AT5G02770
gene id: 3702:AT5G02770
uniprot id: Q9LZ08
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Contributes to the transfer of mature mRNA from the nucleus to the cytosol. May function before mRNAs enter nuclear pore and in the same mRNA export pathway as MOS3.
messages: Interacts with RH15 and RH56.
messages: No visible phenotype under normal growth conditions.
messages: nucleoplasm

3702:AT3G02450
gene id: 3702:AT3G02450
uniprot id: A0A178VIN9
uniprot id: Q9M895
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AAA ATPase family.
messages: Embryo defective.
messages: Lacks the conserved zinc-binding motif HEXXH, which presumably renders it inactive for proteolysis.
messages: Might be involved in chaperone functions or play a structural role in the thylakoid FtsH complex.
messages: Oligomer.
messages: chloroplast membrane

3702:AT4G02195
gene id: 3702:AT4G02195
uniprot id: A0A384L4D5
uniprot id: Q0WNW7
uniprot id: Q9SWH4
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the syntaxin family.
messages: Contributes to the regulation of secretory and vacuolar transport pathways in the post-Golgi network, and to the maintenance of the Golgi apparatus and trans-Golgi network (TGN) morphologies (PubMed:22307646). Vesicle trafficking protein that functions in the secretory pathway and mediates liposome fusion (PubMed:24021022). Required for extracellular resistance responses to a fungal pathogen (PubMed:22307646). Also involved in the protection of chloroplasts from salicylic acid-dependent biotic stress (PubMed:22307646).
messages: Expressed at low levels in roots, stems, flowers and leaves.
messages: Gametophytic lethal in homozygote plants (PubMed:22307646). Slightly shorter roots (PubMed:22307646). The double mutant syp41 syp42 have short roots (PubMed:22307646). The double mutant syp42 syp43 exhibits severe pleiotropic defects, including short roots, a large number of lateral roots, semi dwarfism and early senescence; these phenotypes are associated with defective secretory and vacuolar transport pathways (PubMed:22307646). Double mutant plants syp42 syp43 have an increased sensitivity to the powdery fungus Golovinomyces orontii with leaf chlorosis in a pathogen-inducible salicylic acid (SA) biosynthesis-dependent manner, thus revealing a biotic stress-induced and SA-dependent chloroplast dysfunction (PubMed:22307646). Plants lacking the three genes SYP41 SYP42 and SYP43 are seedling lethals (PubMed:22307646).
messages: Interacts with VTI12 and SYP61 to form a t-SNARE complex and with VPS45.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: trans-Golgi network membrane

3702:AT1G26799
gene id: 3702:AT1G26799
uniprot id: A0A5S9VZS9
uniprot id: Q6AWV3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT3G03310
gene id: 3702:AT3G03310
uniprot id: Q93V61
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Hydrolyzes the sn-1 acylester bond of phospholipids. Phosphatidylcholine, phosphatidylethanolamine and phosphatidic acid can be used as substrates. Weak activity with lysophosphatidylcholine and no activity with tripalmitoylglycerol and cholesteryl oleate. Seems to have a preference for unsaturated fatty acids at the sn-1 position.
messages: Microsome membrane
messages: Unaffected by calcium.

3702:AT3G02065
gene id: 3702:AT3G02065
uniprot id: A0A178VDI9
uniprot id: Q3EBD3
names: Domain
names: Miscellaneous
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX59 subfamily.
messages: May be due to an intron retention.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G45545
gene id: 3702:AT1G45545
uniprot id: A0A1P8AUD2
uniprot id: A0A7G2DVY5
uniprot id: Q9C638
names: Similarity
messages: Belongs to the WEB family.

3702:AT1G28560
gene id: 3702:AT1G28560
uniprot id: A0A1P8ARE1
uniprot id: A0A654EIT8
uniprot id: Q8L627
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SNAPC3/SRD2 family.
messages: Expressed in seedlings, apical meristems, developing leaves, roots, stipules and flowers.
messages: In young seedlings, accumulates in shoot and root apical meristems (SAM and RAM, respectively), leaf primordia, and root stele tissues. In roots, high levels throughout young root primordia that later decrease at the arrest of cell division, and finally increase again when the apical meristem become activated. In young developing leaves, present in guard cells, vascular tissues, trichomes, and trichome support cells to be later expressed uniformly in the lamina. Gradually restricted to the leaf margin and fades out in fully expanded leaves. In roots, detected in apices, stele tissues, and lateral root primordia. In flowers, first observed over the floral bud, and later restricted to vascular tissues in developing floral organs, except for the pistil, where the expression is ubiquitous. In mature flowers, disappears progressively from the pistil, but accumulates in mature pollen and the filaments. Also present in pedicels. In pollinated pistils, highly expressed in ovaries that contain developing embryos. Present throughout embryogenesis, particularly in the lower half of the embryo at the heart-shaped stage and in the radicle RAM region at the cotyledonary stage.
messages: Lethal.
messages: Nucleus
messages: Part of the SNAPc complex.
messages: Transcription activator of small-nuclear RNA genes (snRNA), which have essential roles in pre-mRNA splicing and rRNA processing. Essential protein involved in the establishment of apical meristems and organ primordia, embryogenesis, cell differentiation and cell proliferation, probably by modulating the establishment of auxin gradients. Participates in the control of competence in cell proliferation; required for the reinitiation of the progression of the cell cycle and subsequent cell proliferation during cell redifferentiation leading to callus formation, especially during the first day of dedifferentiation (e.g. callus, root and shoot formation from root and hypocotyl explants).
messages: Transiently induced by auxin (2,4-D), with a synergistic action of auxin and cytokinin on transcript levels.

3702:AT1G80690
gene id: 3702:AT1G80690
uniprot id: A0A178W4J2
uniprot id: A0A7G2EAF0
uniprot id: Q8LA90
uniprot id: Q9SAI9
names: Similarity
messages: Belongs to the DeSI family.

3702:AT2G01590
gene id: 3702:AT2G01590
uniprot id: Q9ZVE7
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: CRR3 is not conserved in cyanobacteria and seems to be a subunit of the NDH complex which is specific to the chloroplast.
messages: Impaired chloroplastic NAD(P)H dehydrogenase (NDH) activity, probably due to a reduced stability of the NDH complex.
messages: Probable subunit of the chloroplast NAD(P)H dehydrogenase (NDH) complex of the photosynthetic electron transport chain. Required for both formation and activity of NDH. May function in assembly or stabilization of the NDH complex.
messages: chloroplast thylakoid membrane

3702:AT3G50270
gene id: 3702:AT3G50270
uniprot id: A0A384L9F6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G80740
gene id: 3702:AT1G80740
uniprot id: O49139
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Alternative splice site used 50% of the time in cv. Columbia.
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
messages: Could be the product of a pseudogene. The protein is severely truncated in several ecotypes and the gene even harbors a complete retrotransposon in 3 ecotypes.
messages: Expressed in flowers. Not detected in leaves, roots, seedlings and plants prior formation of flower buds.
messages: May be involved in the CpXpG methylation and in gene silencing.
messages: Nucleus

3702:AT3G15370
gene id: 3702:AT3G15370
uniprot id: A0A178VC47
uniprot id: A0A1I9LSN2
uniprot id: Q9LDJ3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT3G02140
gene id: 3702:AT3G02140
uniprot id: A0A178VMX2
uniprot id: Q9S7Z2
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a negative regulator of abscisic acid (ABA) and salinity responses.
messages: Acts as a negative regulator of abscisic acid (ABA) response.
messages: Belongs to the Ninja family.
messages: Exhibits insensitivity to abscisic acid (ABA) and salt.
messages: Interacts with ABI5/DPBF1, AREB3/DPBF3, EEL/DPBF4, ABF1 and ABF3/DPBF5.
messages: Nucleus
messages: Predominantly expressed in roots and seedlings.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by abscisic acid (ABA) and salt. Down-regulated by cold and glucose.

3702:AT4G19975
gene id: 3702:AT4G19975
uniprot id: A0A1P8B5X7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 77 family.
messages: Golgi apparatus membrane

3702:AT3G15880
gene id: 3702:AT3G15880
uniprot id: Q27GK7
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Nucleus
messages: Tetramer (PubMed:26601214). Interacts with WUS (via the C-terminal domain) (PubMed:16461579). Interacts with SPL (via EAR motif) (PubMed:25527103, PubMed:25378179). Interacts with SPEAR3/TIE1 (PubMed:23444332). Binds to and corepresses GAF1/IDD2 at the promoter of GA20OX2 gene (PubMed:25035403).
messages: The N-terminal TOPLESS domain (TPD) (1-209) binds directly to a 12-amino acid LxLxL EAR motif peptide.
messages: Transcription corepressor of Zinc finger transcription factors GAF1/IDD2 and ENY/IDD1 in regulation of gibberellin homeostasis and signaling.

3702:AT2G27110
gene id: 3702:AT2G27110
uniprot id: A0A654EY46
uniprot id: B9DH05
uniprot id: Q9ZVC9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT5G50720
gene id: 3702:AT5G50720
uniprot id: A0A384LCF8
uniprot id: Q0IGM2
uniprot id: Q9FED2
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DP1 family.
messages: By abscisic acid (ABA), cold, drought and salt stresses.
messages: Membrane
messages: Predominantly expressed in stem.

3702:AT2G19640
gene id: 3702:AT2G19640
uniprot id: Q9ZUM9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
messages: Chromosome
messages: Histone methyltransferase.
messages: Nucleus

3702:AT5G55480
gene id: 3702:AT5G55480
uniprot id: Q9FJ62
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: Cell membrane
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Involved in primary cell wall organization. Required for the accumulation of crystalline cellulose.

3702:AT1G03280
gene id: 3702:AT1G03280
uniprot id: Q93ZW3
names: Similarity
messages: Belongs to the TFIIE alpha subunit family.

3702:AT3G62030
gene id: 3702:AT3G62030
uniprot id: A0A178VJX5
uniprot id: F4IX28
uniprot id: P34791
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Binds cyclosporin A (CsA). CsA mediates some of its effects via an inhibitory action on PPIase. PPIase activity is optimal in reduced form and minimal in oxidized form. Reduction of the oxidized form is mediated by thioredoxin (TRX-M).
messages: Hypersensitivity to high light and rose bengal.
messages: Interacts with SAT1 and A.tumefaciens VirD2.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the light-induced increase of thiol accumulation. Assists the folding or assembly of SAT1 enzyme to form the cysteine synthase complex. Links light and redox signals to the regulation of cysteine biosynthesis in response to stress.
messages: Strongly induced by light.
messages: Ubiquitous, mostly expressed in leaves and flowers.
messages: chloroplast stroma

3702:AT4G35570
gene id: 3702:AT4G35570
uniprot id: A0A178V4H6
uniprot id: O49597
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HMGB family.
messages: Binds preferentially double-stranded DNA. Confers resistance to salt and drought stresses.
messages: Mostly expressed lateral roots, root tips and flowers (including pedicels, but excluding ovary), and, to a lower extent, in cotyledons, hypocotyls, stems and leaves.
messages: Nucleus

3702:AT1G59670
gene id: 3702:AT1G59670
uniprot id: A0A178WLE0
uniprot id: Q9LQ48
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT5G18407
gene id: 3702:AT5G18407
uniprot id: Q2V369
names: Caution
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: May be due to a competing acceptor splice site.
messages: Secreted

3702:AT3G07610
gene id: 3702:AT3G07610
uniprot id: F4JFK4
uniprot id: F4JFK6
uniprot id: Q9SSE9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in inflorescences, roots, siliques, leaves and stems.
messages: Histone demethylase that demethylates 'Lys-9' (H3K9me) of histone H3 with a specific activity for H3K9me2 and H3K9me1. No activity on H3K9me3, H3K4me3/2/1, H3K27me3/2/1 and H3K36me3/2/1. Counteracts the DNA methylation of endogenous genes (PubMed:33986281). Involved in the control of several developmental processes by protecting genes from silencing. Demethylates H3K9me2 in the promoter regions of RDR2 and DCL3 and mediates the repression of ectopic non-CpG methylation at RDR2, DCL3 and APC13 loci (PubMed:24404182). Protects also a large number of transcribed genes from non-CpG methylation. May regulate gene expression via a pathway involving indirect silencing of gene expression through small RNA-directed DNA methylation (RdDM)-directed repression. Modulates stomatal development by regulating the methylation-mediated silencing of ERECTA receptor genes (e.g. ER, ERL1 and ERL2) and preventing cell divisions (PubMed:27697902).
messages: Nucleus
messages: Promoted by the RNA-binding protein ASI1 via its association with an intronic heterochromatic repeat element and epigenetic regulation.
messages: Small and narrow leaves, arrest in flower development, degenerated pollen grains and reduced fertility leading to few viable seeds. Non-CpG hypermethylation at APC13, RDR2 and DCL3 loci (PubMed:24404182). Overproduction of stomatal lineage cells due to increased cell divisions and associated with DNA hypermethylation and silencing of ERECTA receptor genes such as ER, ERL1 and ERL2 (PubMed:27697902). Growth defects are partially complemented by the loss of JMJ24 mostly at vegetative stage, but the double mutant jmj24-3 ibm1-4 has synergistic effect on root growth (PubMed:28400174). Broad spectrum of up-regulated and down-regulated genes (PubMed:28400174).

3702:AT4G04830
gene id: 3702:AT4G04830
uniprot id: A0A5S9XPU6
uniprot id: F4JGY0
uniprot id: Q9ZS91
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer (By similarity).
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.
messages: cytosol

3702:AT1G62630
gene id: 3702:AT1G62630
uniprot id: Q9SI85
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT3G45720
gene id: 3702:AT3G45720
uniprot id: A0A654FE14
uniprot id: Q9M171
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in roots.
messages: Membrane
messages: Transporter involved in a passive nitrate efflux.

3702:AT2G23620
gene id: 3702:AT2G23620
uniprot id: Q8S8S9
names: Activity Regulation
names: Function
names: Induction
names: Miscellaneous
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: By pathogen infection.
messages: Esterase activity is down-regulated by salicylic acid (SA).
messages: Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants.
messages: Methylesterase shown to have carboxylesterase activity, methyl indole-3-acetic acid (MeIAA) esterase activity, methyl salicylate (MeSA) esterase activity and methyl jasmonate (MeJA) esterase activity in vitro. Required to convert methyl salicylate (MeSA) to salicylic acid (SA) as part of the signal transduction pathways that activate systemic acquired resistance in systemic tissue. MeSA is believed to be an inactive form that needs to be demethylated to exert a biological effect.

3702:AT3G07860
gene id: 3702:AT3G07860
uniprot id: Q84WS8
names: Subcellular Location Annotation
names: Subunit
messages: Component of the U11/U12 snRNPs that are part of the U12-type spliceosome.
messages: Nucleus

3702:AT1G22710
gene id: 3702:AT1G22710
uniprot id: A0A178WBV6
uniprot id: Q39231
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.
messages: Cell membrane
messages: Expressed in leaves and, to a lower extent, in roots, flowers and stems. Highly specific to the phloem, exclusively localized in companion cells (at protein level).
messages: First seen in the tips of young rosette leaves. In older leaves and during their concomitant sink/source transition, expression proceeded from the tips to the bases of the leaves.
messages: Homodimer. Interacts with SUC3 and SUC4.
messages: Induced by sucrose depletion. Specifically induced by H.schachtii (cyst nematodes) in nematode-induced syncytia.
messages: Inhibited by protonophores (e.g. dinitrophenol and carbonyl cyanide m-chlorophenyl-hydrazone (CCCP)) and SH group inhibitors (e.g. N-ethylmaleimide (NEM) and p-chloromercuriphenyl sulphonic acid (PCMPS)).
messages: Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). Can also transport other glucosides such as maltose, arbutin (hydroquinone-beta-D-glucoside), salicin (2-(hydroxymethyl)phenyl-beta-D-glucoside), alpha-phenylglucoside, beta-phenylglucoside, alpha-paranitrophenylglucoside, beta-paranitrophenylglucoside, and paranitrophenyl-beta-thioglucoside. May also transport biotin. Required for apoplastic phloem sucrose loading in source tissues (e.g. leaves) in order to transport it to sink tissues (e.g. roots, flowers).

3702:AT4G30540
gene id: 3702:AT4G30540
uniprot id: A0A654FU91
uniprot id: Q9M0A6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C26 family.
messages: Involved in glucosinolate biosynthesis. Hydrolyzes the gamma-glutamyl peptide bond of several glutathione (GSH) conjugates to produce Cys-Gly conjugates related to glucosinolates. The gamma-Glu-Cys-Gly-GSH conjugates are the sulfur-donating molecule in glucosinolate biosynthesis.
messages: cytosol

3702:AT2G23980
gene id: 3702:AT2G23980
uniprot id: A0A1P8AYC4
uniprot id: A0A1P8AYI8
uniprot id: A0A654EWQ3
uniprot id: O82226
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Membrane
messages: Probable cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT3G09470
gene id: 3702:AT3G09470
uniprot id: A0A178V887
uniprot id: Q94AA1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the unc-93 family.
messages: Membrane

3702:AT1G45249
gene id: 3702:AT1G45249
uniprot id: A0A1P8AV67
uniprot id: A0A1P8AV75
uniprot id: A0A7G2E0X3
uniprot id: F4HRC9
uniprot id: F4HRD0
uniprot id: Q9M7Q4
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family. ABI5 subfamily.
messages: DNA-binding heterodimer (By similarity). Interacts with ARIA.
messages: Defective in glucose response and grows faster. Exhibits abscisic acid (ABA) insensitivity.
messages: Expressed in roots, leaves, flowers and siliques but not in seeds.
messages: Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.
messages: Nucleus
messages: The activation by phosphorylation is induced by abscisic acid (ABA). Phosphorylated by SRK2C, SRK2D, SRK2E, SRK2F and SRK2I in vitro.
messages: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose.

3702:AT3G50810
gene id: 3702:AT3G50810
uniprot id: A0A654FET6
uniprot id: P0CB17
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT4G01570
gene id: 3702:AT4G01570
uniprot id: Q8VZE4
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G06290
gene id: 3702:AT5G06290
uniprot id: Q9C5R8
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
messages: Down-regulated by ascorbate.
messages: Homodimer; disulfide-linked, upon oxidation (By similarity). Interacts with the plastidial thioredoxin CDSP32. Interacts with the plastidial NADPH-dependent thioredoxin reductase ANTR-C (By similarity).
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this typical 2-Cys peroxiredoxin, C(R) is provided by the other dimeric subunit to form an intersubunit disulfide. The disulfide is subsequently reduced by thioredoxin CDSP32.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. May be an antioxidant enzyme particularly in the developing shoot and photosynthesizing leaf.
messages: chloroplast

3702:AT2G20465
gene id: 3702:AT2G20465
uniprot id: Q8GXR4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G51040
gene id: 3702:AT3G51040
uniprot id: Q9SD42
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G69340
gene id: 3702:AT1G69340
uniprot id: A0A384KYZ5
uniprot id: Q94JV1
names: Similarity
messages: Belongs to the GDAP2 family.

3702:AT3G16990
gene id: 3702:AT3G16990
uniprot id: Q9ASY9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the thiaminase-2 family.
messages: Expressed in roots and shoots.
messages: Expression increases during seed development.
messages: Involved in thiamine salvage by hydrolyzing the thiamine breakdown product 4-amino-5-aminomethyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) (PubMed:25014715). Has a high formylamino-HMP amidohydrolase activity (PubMed:25014715). No activity with other thiamine degradation products such as thiamine mono- or diphosphate, oxothiamine, oxythiamine, thiamine disulfide, desthiothiamine or thiochrome as substrates (PubMed:25014715). Does not display thiaminase II activity, as it is unable to hydrolyze thiamine (PubMed:25014715). Is able to carry out two successive steps in the salvage of thiamine breakdown product, whereas two separate enzymes are required in Bacillus species (Probable). May also serve a damage pre-emption function by hydrolyzing products that would otherwise do harm (Probable).
messages: No visible phenotype.
messages: Used for 3D-structure determination.

3702:AT2G32280
gene id: 3702:AT2G32280
uniprot id: A0A384LLA3
uniprot id: Q9ZV57
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DESIGUAL family.
messages: Defects in vein connectivity early in mutant embryo development leading to reduced complexity of cotyledon vein networks and disconnected veins, including in embryos provasculatures (PubMed:25149602). The mutant deal1-1 exhibits a bilateral symmetry breaking but no obvious defects in dorsoventrality; early leaf primordia fail to acquire bilateral symmetry and instead form ectopic lobes and sinuses (PubMed:29139551). Developmental defects of pistils, some being bent or coiled or twisted, and some showing unfused carpels with exposed ovules (PubMed:29139551). In leaves, marginal cells expressing properly polarized PIN1 are badly recruited, thus leading to misplaced auxin maxima, as well as defects in cell proliferation but not in cell expansion (PubMed:29139551). Altered spatial pattern of CUC2 (PubMed:29139551). The double mutant vcc ops exhibits a complete loss of high-complexity vascular networks (PubMed:25149602). The vcc-3 deal2-1 and vcc-3 deal3-1 double mutants show leaf asymmetry (PubMed:29139551). The vcc-3 deal2-1 deal3-1 triple mutant shows a strong leaf asymmetry (PubMed:29139551).
messages: Endoplasmic reticulum membrane
messages: Expressed in vascular cells, mostly in hypocotyls, and, to a lower extent, in seedlings, roots, flowers, siliques, developing leaves and inflorescences, but barely in mature leaves and seeds (PubMed:25149602, PubMed:29139551). High levels in leaf primordia (PubMed:29139551).
messages: Interacts with OPS.
messages: Mainly present in dividing tissues and fades out during cells differentiation, to reappear later in the vasculature (PubMed:29139551). Expressed in developing embryos and procambial, cambial, and vascular cells of cotyledons, leaves, roots, hypocotyls, and anthers (PubMed:25149602). During leaves development, first observed in leaf primordia, and becomes localized to the margins and the base of the lamina during the transition from cell proliferation to expansion and differentiation (PubMed:29139551). Later confined to petiole primordia (PubMed:29139551). Also detected in flower primordia (PubMed:29139551).
messages: Membrane
messages: Required, together with OPS, for embryo provasculature development and cotyledon vascular complexity and connectivity (PubMed:25149602). Necessary, partially redundantly with DEAL2 and DEAL3, to ensure bilateral symmetry development and early leaf margin patterning, probably via the regulation of auxin and CUC2 distribution (PubMed:29139551). Regulates cell proliferation but not cell expansion (PubMed:29139551).

3702:AT4G34380
gene id: 3702:AT4G34380
uniprot id: A0A178UYD7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G78190
gene id: 3702:AT1G78190
uniprot id: A0A178WBP3
uniprot id: Q9C9R3
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as an activator of both rRNA/tRNA and protein methyltransferases (By similarity). Required for TRM9 tRNA methyltransferase activity (PubMed:21653555).
messages: Belongs to the TRM112 family.
messages: Expressed in anthers.
messages: Interacts with TRM9.

3702:AT1G53230
gene id: 3702:AT1G53230
uniprot id: Q9MAH8
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in cotyledons, particularly in the vascular region, in leaves, roots, buds, flowers and immature siliques.
messages: First observed in the distal and middle regions of cotyledons of torpedo-shaped embryos. Later localized in bending cotyledon, and mature embryos, but no signals were detected in the presumptive shoot apical meristem (SAM) and the boundary region during embryogenesis. During flower development, first observed throughout the floral meristem. Later expressed in rapidly growing floral primordia. Detected to a lower extent in vegetative primordia. During flower development, first observed throughout the floral meristem. Expressed during ovule development (PubMed:25378179).
messages: Interacts with SPL. Interacts with KIN10; KIN11 and FLZ3 (Ref.10).
messages: Nucleus
messages: Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule develpment (PubMed:25378179).

3702:AT4G19000
gene id: 3702:AT4G19000
uniprot id: A0A2H1ZEN0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G33490
gene id: 3702:AT4G33490
uniprot id: A0A178UU81
uniprot id: F4JIY9
uniprot id: Q8LCW1
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT3G12203
gene id: 3702:AT3G12203
uniprot id: A0A1I9LS91
uniprot id: A0A1I9LS92
uniprot id: Q9C7D6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings and siliques.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT1G60995
gene id: 3702:AT1G60995
uniprot id: Q8GWG6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the membralin family.
messages: Membrane

3702:AT5G54900
gene id: 3702:AT5G54900
uniprot id: Q9FPJ8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the polyadenylate-binding RBP45 family.
messages: By ozone-induced oxidative stress.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
messages: Interacts with the poly(A) tail of mRNA in nucleus.
messages: Mostly expressed in seedlings, and, to a lower extent, in leaves, stems, and flowers. Present in immature anther tissues (tapetum cells) and mature pollen grains.
messages: Nucleus

3702:AT1G76180
gene id: 3702:AT1G76180
uniprot id: A0A178WC69
uniprot id: P42763
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant dehydrin family.
messages: By dehydration, cold stress and abscisic acid (ABA). Induction by dehydration occurs after 1 hour and increases to a maximum after 10 hours. Cold stress induction peaks at 1 hour and 5 hours after start of cold exposure.
messages: In stems, cauline leaves, roots and flowers. Low levels found in maturing seeds. Absent in dry seeds.
messages: Intrinsically disordered protein acting as a chaperone. Prevents heat-induced aggregation and/or inactivation of various substrates. Binds to acidic phospholipid vesicles without affecting membrane fluidity.

3702:AT5G22000
gene id: 3702:AT5G22000
uniprot id: Q9ZT42
names: Developmental Stage
names: Function
messages: E3 ubiquitin-protein ligase involved in the positive regulation of the gametogenesis progression. Required for the degradation of KRP6, a cyclin-dependent kinase inhibitor which accumulates during meiosis and blocks the progression of subsequent mitoses during gametophytes development. Functions in association with RHF1A.
messages: Expressed throughout flower development.

3702:AT3G43180
gene id: 3702:AT3G43180
uniprot id: Q9LXL6
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT1G34760
gene id: 3702:AT1G34760
uniprot id: A0A654EGX8
uniprot id: Q9S9Z8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 14-3-3 family.
messages: Cytoplasm
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
messages: Nucleus

3702:AT1G05300
gene id: 3702:AT1G05300
uniprot id: A0A654E804
uniprot id: F4I8P9
uniprot id: O23039
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZIP transporter (TC 2.A.5) family.
messages: Cell membrane
messages: In shoots and roots by zinc starvation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Probably mediates zinc uptake from the rhizosphere.

3702:AT1G29870
gene id: 3702:AT1G29870
uniprot id: Q9FXG2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of glycine to tRNA(Gly). Is also able produce diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs (By similarity).
messages: Cytoplasm
messages: Homodimer.

3702:AT3G46440
gene id: 3702:AT3G46440
uniprot id: A0A178VDJ4
uniprot id: Q9SN95
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.
messages: Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity).
messages: Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.
messages: Cytoplasm

3702:AT1G66280
gene id: 3702:AT1G66280
uniprot id: A0A5S9WSB9
uniprot id: Q9C8Y9
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated upon binding to PBP1 or PBP2.
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Beta-D-glucosidase active on scopolin >> esculin >> 4-MU-glucoside. No activity with DIMBOA-glucoside, pNP-glucoside, oNP-glucoside and sinigrin as substrates.
messages: Component of the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.
messages: Endoplasmic reticulum lumen
messages: Expressed exclusively in roots.
messages: Up-regulated by salt, 2,4-D and methyl jasmonate. Down-regulated by cold and mannitol.

3702:AT5G16970
gene id: 3702:AT5G16970
uniprot id: A0A178U6Z5
uniprot id: Q39172
names: Activity Regulation
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NADP-dependent oxidoreductase L4BD family.
messages: Cytoplasm
messages: Expressed in leaves.
messages: Homodimer.
messages: Inhibited by N-ethylmaleimide and p-chloromercuribenzoic acid.
messages: Involved in the detoxification of reactive carbonyls (PubMed:10848984, PubMed:12514241, PubMed:16299173). Acts on lipid peroxide-derived reactive aldehydes (PubMed:12514241). Specific to a double bond activated by an adjacent carbonyl group (PubMed:12514241). Can use both quinones and diamide as substrates, but not menadione, ferricyanide or phylloquinone (PubMed:10848984). Can use 4-hydroxy-(2E)-nonenal (HNE), 4-hydroxy-(2E)-hexenal (HHE), (2E)-nonenal, (2E)-hexenal, (2E)-pentenal, propenal (acrolein), 3-buten-2-one and 3-penten-2-one, but not (R)-(-)-carvone, n-nonanal, n-hexanal, (3Z)-hexanal, cyclohex-2-en-1-one or 12-oxo phytodienoic acid (OPDA) as electron acceptors (PubMed:12514241). Catalyzes the reduction of the alpha,beta-unsaturated bond of 2-alkenals, of lipid peroxide-derived oxenes 9-oxo-10(E),12(Z)-octadecadienoic acid (9-KODE) and 13-oxo-9(Z),11(E)-octadecadienoic acid (13-KODE), as well as 4-oxo-(2E)-nonenal and 4-hydroxynonenal (PubMed:16299173). Can use 12-oxo-10(E) dodecanoate (traumatin), trans-1,3 diphenyl-2-propenone, trans-1,4-diphenyl-2-butene-1,4-dione, 9-oxo-12,13-epoxy-(10E)-octadecenoic acid (trans-EKODE-1b) and 9,13-dihydroxy-10-oxo-11-octadecenoic acid as substrates (PubMed:26678323). Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro) (PubMed:17028190). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (PubMed:17028190). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis (PubMed:17028190).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated upon treatment with paraquat, t-butylhydroperoxide, diamide, and menadione.
messages: nucleoplasm

3702:AT5G54570
gene id: 3702:AT5G54570
uniprot id: A0A1P8BA32
uniprot id: A0A1P8BA38
uniprot id: Q9FIU7
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT2G32690
gene id: 3702:AT2G32690
uniprot id: O48848
names: Induction
messages: Slightly induced by 16-hydroxypalmitic acid (HPA), a major component of cutin that triggers H(2)O(2) production. Accumulates in response to abscisic acid (ABA) and salicylic acid (SA) treatments.

3702:AT5G40990
gene id: 3702:AT5G40990
uniprot id: Q9FLN0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: By ethylene.
messages: Confers resistance to the necrotrophic fungus Alternaria brassicicola. Possesses lipase and antimicrobial activities that directly disrupt fungal spore integrity. Triggers systemic resistance, mostly by the ethylene-dependent pathway.
messages: In the resistant cv. Columbia (glip1-1 and glip1-2), confers susceptibility to A.brassicicola.
messages: Secreted

3702:AT5G38960
gene id: 3702:AT5G38960
uniprot id: A0A654G661
uniprot id: Q9FMA6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT3G53730
gene id: 3702:AT3G53730
uniprot id: A0A384LKZ7
uniprot id: P59259
uniprot id: Q6NR90
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: May be acetylated by MBD9.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. Interacts with ORTH2 (PubMed:17242155). Interacts with AHL27 (PubMed:24218605).

3702:AT4G30920
gene id: 3702:AT4G30920
uniprot id: A0A654FUF0
uniprot id: Q944P7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M17 family.
messages: Binds 2 Mn(2+) ions per subunit.
messages: Functions as molecular chaperone to protect proteins from heat-induced damage.
messages: Homohexamer (dimer of homotrimers).
messages: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity). Possesses leucine aminopeptidase activity against the model substrate leucine-amido methyl coumarin (PubMed:22493451). Does not seem to possess Cys-Gly dipeptidase activity (PubMed:25716890).
messages: chloroplast

3702:AT2G07200
gene id: 3702:AT2G07200
uniprot id: A0A654F371
uniprot id: F4IK96
names: Similarity
messages: Belongs to the peptidase C48 family.

3702:AT4G28420
gene id: 3702:AT4G28420
uniprot id: A0A5S9XX34
uniprot id: Q67Y55
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

3702:AT2G32460
gene id: 3702:AT2G32460
uniprot id: O80883
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Hyposensitivity to abscisic acid (ABA) (PubMed:17217461). Reduced expression levels of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. The triple mutant myb33 myb65 myb101 has a male sterility and exhibits slower protein storage vacuoles (PSVs) vacuolation rate in aleurone layers upon seed germination (PubMed:20699403). Reduced production of abnormal pollen grains with misarranged male germ unit (MGU) (PubMed:22101548). The triple mutant myb97 myb101 myb120 is impaired in pollen tube growth arrest and subsequent sperm cell release in the female gametophyte thus leading to a drastically reduced fertility. Altered pollen tube-specific gene expression (PubMed:23791732, PubMed:24278028).
messages: Nucleus
messages: Present in a small patch of cells on the innermost side of the hypocotyl hook of the germinating seedling, in the subapical pith cells of plants growing vegetatively, in a similar zone of expanding cells both in developing inflorescence stems, and below mature flowers and elongating siliques (PubMed:11743113). Accumulates in the pollen tube nucleus during pollen tube growth through the pistil (PubMed:23791732).
messages: Present mostly in flowers, siliques and floral shoot tips (PubMed:11743113, PubMed:25268707). Expression is restricted to the subapical pith cells of both vegetative and flowering plants and to the hypocotyl hook (PubMed:11743113). Expressed in pollen grains and pollen tube (PubMed:23791732, PubMed:24278028). Mostly expressed in mature pollen grains, and, to a lower extent, in inflorescences and siliques (PubMed:24278028).
messages: Repressed in germinating seeds by microRNA159 (miR159)-mediated cleavage in an abscisic acid (ABA) and ABI3-dependent manner, probably to desensitize hormone signaling during seedling stress responses (PubMed:15226253, PubMed:17217461). Induced by increased upon gibberellic acid (GA) treatment (PubMed:20699403).
messages: Transcription activator (PubMed:24278028, PubMed:25268707). Binds to 5'-CAACTGTC-3' and/or 5'-TAACAAA-3' motif in target gene promoter (e.g. alpha-amylase) to promote their expression (PubMed:11743113). Positive regulator of abscisic acid (ABA) responses leading to growth arrest during seed germination (PubMed:17217461). Promotes the expression of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. Together with MYB33 and MYB65, promotes the programmed cell death (PCD) leading to vacuolation of protein storage vacuoles (PSVs) in the aleurone layers during seed germination (PubMed:20699403). Maybe involved in the regulation of leaves lamina morphogenesis (PubMed:25268707). Involved in pollen grain development (PubMed:22101548). Together with MYB97 and MYB120, functions as a male factor that controls pollen tube-synergid interaction in fertilization. Required for pollen tube growth arrest and sperm cell release in the female gametophyte, probably via the regulation of pollen tube-specific gene expression (PubMed:24278028, PubMed:23791732).

3702:AT1G54410
gene id: 3702:AT1G54410
uniprot id: Q9SLJ2
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the KS-type dehydrin family.
messages: By cold stress (PubMed:15165189).
messages: Cytoplasm
messages: Highly expressed in the cambial zone of the stem vasculature (at protein level). Expressed in roots, rosettes leaves, stems, cauline leaves, flowers and siliques.
messages: Interacts with PXL1.
messages: Intrinsically disordered and metal-binding protein. Binds to the divalent cations cobalt, nickel, copper and zinc, but not to magnesium, calcium, manganese or cadmium (Ref.8). Binding to metal ions decreases disordered state, decreases susceptibility to trypsin and promotes self-association. Can reduce the formation of reactive oxygen species (ROS) in a copper-ascorbate in vitro system (PubMed:23382551).
messages: Nucleus
messages: Phosphorylated in vivo (Ref.8). Phosphorylated in vitro by PXL1 (PubMed:25602612).

3702:AT3G04100
gene id: 3702:AT3G04100
uniprot id: Q9M8W6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G15210
gene id: 3702:AT1G15210
uniprot id: A0A178WAD4
uniprot id: Q7PC86
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
messages: Induced by cycloheximide (CHX) and cold/dark treatment.
messages: May be a general defense protein.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous with higher levels in roots.

3702:AT5G11240
gene id: 3702:AT5G11240
uniprot id: A0A654G0A7
uniprot id: B5X503
names: Subcellular Location Annotation
messages: nucleolus

3702:AT3G61990
gene id: 3702:AT3G61990
uniprot id: A0A654FJX0
uniprot id: Q9M266
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family.

3702:AT5G67530
gene id: 3702:AT5G67530
uniprot id: Q9FJX0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family. PPIL2 subfamily.
messages: Expressed in leaves, flower buds and stems. Lower levels of expression in roots.
messages: May catalyze the cis-trans isomerization of proline imidic peptide bonds in oligopeptides thereby assisting the folding of proteins. May also function as a chaperone, playing a role in intracellular transport of proteins. May also have a protein ubiquitin ligase activity acting as an E3 ubiquitin protein ligase or as a ubiquitin-ubiquitin ligase promoting elongation of ubiquitin chains on proteins.
messages: Nucleus

3702:AT3G60960
gene id: 3702:AT3G60960
uniprot id: Q9LEX6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G38910
gene id: 3702:AT5G38910
uniprot id: A0A1P8BH00
uniprot id: A0A654G6Q3
uniprot id: Q9FMB0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT1G73210
gene id: 3702:AT1G73210
uniprot id: A0A178W4P9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G10940
gene id: 3702:AT2G10940
uniprot id: A0A654ESF6
uniprot id: Q9SKI0
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT1G35670
gene id: 3702:AT1G35670
uniprot id: Q39016
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: By drought and high-slat stress, but not by low-temperature, heat stress or abscisic acid treatment.
messages: Cytoplasm
messages: Interacts with Di19.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger. Functions as regulator of the calcium-mediated abscisic acid (ABA) signaling pathway. Phosphorylates ABA-responsive transcription factors ABF1 and ABF4 in vitro.
messages: Mutant cpk11-2 shows reduced ABA and salt responsiveness in seed germination.
messages: Nucleus
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (290-320) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT3G01330
gene id: 3702:AT3G01330
uniprot id: A0A178V7U8
uniprot id: Q8RWL0
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Cytoplasm
messages: Expressed in a cell cycle-dependent manner. Most abundant in mid-S phase.
messages: High expression in young cotyledons and leaves, hypocotyls, shoot apical meristem, roots and mature pollen grains, moderate in developing trichomes, flowers and at early stages of developing anthers, and barely detectable in mature leaves. Not detected in primary root meristem, emerging lateral roots, pistils, developing embryos and siliques.
messages: Inhibitor of E2F-dependent activation of gene expression. Binds specifically the E2 recognition site without interacting with DP proteins and prevents transcription activation by E2F/DP heterodimers. Does not bind retinoblastoma-related proteins. Acts as a growth regulator but is not associated with changes in the expression of cell cycle marker genes or in nuclear ploidy levels. Has no effect on cell proliferation, but may repress cell wall biosynthesis genes during cell elongation in differentiated cells.
messages: Nucleus

3702:AT1G61300
gene id: 3702:AT1G61300
uniprot id: O64790
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the disease resistance NB-LRR family.
messages: Cell membrane
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT2G01520
gene id: 3702:AT2G01520
uniprot id: Q9ZVF3
names: Similarity
messages: Belongs to the MLP family.

3702:AT1G75390
gene id: 3702:AT1G75390
uniprot id: C0Z2L5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the micropylar endosperm and radicle tip in early germinating seeds.
messages: Forms heterodimers with BZIP1, BZIP9, BZIP10, BZIP25 and BZIP63.
messages: No visible phenotype under normal growth conditions, but seeds have decreased germination speed after imbibition, without affecting overall germination rate.
messages: Nucleus
messages: Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds.

3702:AT5G65760
gene id: 3702:AT5G65760
uniprot id: Q1JPM1
names: Similarity
messages: Belongs to the peptidase S28 family.

3702:AT3G55770
gene id: 3702:AT3G55770
uniprot id: Q9M047
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds to actin filaments and promotes cross-linking into thick bundles. Has an actin-stabilizing activity. The actin regulatory activities are not regulated by pH and [Ca(2+)].
messages: Cross-links actin with a constant of dissociation of 0.5 uM.
messages: Expressed in roots, leaves, stems, flowers and siliques. Barely detected in pollen.
messages: Interacts with F-actin.
messages: cytoskeleton

3702:AT2G37585
gene id: 3702:AT2G37585
uniprot id: Q8S8P3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 14 family.
messages: Beta-glucuronosyltransferase involved in the biosynthesis of type II arabinogalactan (AG). Modifies both the beta-1,6-linked galactan and beta-1,3-linked galactan present in type II AG.
messages: Golgi apparatus membrane

3702:AT3G02910
gene id: 3702:AT3G02910
uniprot id: Q9M8T3
names: Function
names: Similarity
messages: Belongs to the gamma-glutamylcyclotransferase family.
messages: Putative gamma-glutamylcyclotransferase.

3702:AT2G43650
gene id: 3702:AT2G43650
uniprot id: Q8L3P4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Thallo' is the Greek goddess of buds and shoots.
messages: Belongs to the SAS10 family.
messages: Embryo defective arrested at the cotyledon stage, associated with enlarged nucleoli probably due to the over-accumulation of pre-rRNAs.
messages: Essential protein during embryogenesis (PubMed:15266054, PubMed:27792779). Involved both in gene transcription regulation and in processing events critical for proper rRNA biogenesis and nucleolar organization during reproduction; contributes to pre-rRNA processing at the 5' external transcribed spacer (PubMed:27792779). Binds RNA (By similarity).
messages: In seedlings, observed in the subapical region of primary roots, lateral root primordia, leaf veins and around guard cells (PubMed:27792779). In flowers, present in ovules, pollen, embryos and endosperm (PubMed:27792779).
messages: Interacts with NUCL1, NUCL2, JMJ14, NOF1 and MPP10 in the nucleus.
messages: Mainly present in tissues undergoing rapid cellular growth and differentiation (PubMed:27792779). Mostly expressed in shoots and flowers, and, to a lower extent, in leaves, siliques, roots and seedlings (PubMed:27792779).
messages: Nucleus
messages: nucleolus

3702:AT4G30490
gene id: 3702:AT4G30490
uniprot id: A0A178UYG0
uniprot id: Q8L517
names: Similarity
messages: Belongs to the AFG1 ATPase family.

3702:AT5G66150
gene id: 3702:AT5G66150
uniprot id: A0A1P8BFL6
uniprot id: A0A1P8BFM6
uniprot id: Q9FKW9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycosyl hydrolase 38 family.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: Liberates mannose from p-nitrophenyl-alpha-D-mannoside in vitro.
messages: Vacuole

3702:AT4G34100
gene id: 3702:AT4G34100
uniprot id: F4JKK0
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Constitutively expressed throughout development.
messages: Expressed in cotyledons, leaves, roots, stems, inflorescences and siliques. Expression higher at the top than at the base of the stem.
messages: Membrane
messages: Probable E3 ubiquitin ligase acting as a positive post-transcriptional regulator of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity. Might be involved in the quality control that degrades misfolded proteins (By similarity).
messages: Semiglossy stem. Elevated drought tolerance and reduced transpiration rate. Elevated amounts of 18-carbon-length cutin monomers and shift in the cuticular wax profile toward the very-long-chain free fatty acids tetracosanoic acid (C24) and hexacosanoic acid (C26).
messages: The RING-CH-type zinc finger domain is required for E3 ligase activity.

3702:AT3G51850
gene id: 3702:AT3G51850
uniprot id: A0A1I9LP01
uniprot id: Q8W4I7
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Cell membrane
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (318-348) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT2G04930
gene id: 3702:AT2G04930
uniprot id: A0A178VS59
uniprot id: Q9SI33
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: This promotes the activity of RNA polymerase II.

3702:AT3G50930
gene id: 3702:AT3G50930
uniprot id: Q8VZG2
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates in response to flg22, thus being a FLARE (flagellin rapidly elicited gene) (PubMed:15181213). Up-regulated by the Yariv phenylglycoside (beta-D-Glc)(3) (PubMed:15235117). Expressed during hypersensitive response (HR) mediated by the bacterial pathogen Xanthomonas campestris pv. campestris (PubMed:10518009). Slightly induced by the virulent pathogen Erwinia carotovora subsp. carotovora (PubMed:16270229). Triggered by benzothiadiazole S-methylester (BTH) (PubMed:16766691). Accumulates in the presence of 2,4,6-trinitrotoluene (TNT) (PubMed:18702669).
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Binds to the Yariv phenylglycoside (beta-D-Glc)(3).
messages: Membrane

3702:AT3G07700
gene id: 3702:AT3G07700
uniprot id: B9DGY1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. ADCK protein kinase family.
messages: Down-regulated in response to iron deprivation.
messages: Involved in resistance to oxidative stress. Influences responses to reactive oxygen species (ROS) production. Regulates plastoglobules formation in thylakoids. Together with OSA1, regulates iron distribution within the chloroplast and mediates the oxidative stress response (PubMed:24117441). Together with ABC1K8, influences chloroplast lipid synthesis/accumulation and modulates chloroplast membrane composition in response to stress (PubMed:25809944).
messages: Larger plastoglobules associated with thylakoids characterized by VTE1 accumulation and high tocopherol content. The pale green double mutant atsia1 atosa1 accumulates ferritin and superoxides, exhibits an increased nonphotochemical quenching (NPQ), and have a reduced tolerance to reactive oxygen species (ROS) (PubMed:24117441). Lower levels of the highly unsaturated lipid digalactosyldiacylglycerol (DGDG) and of different forms of monogalactosyldiacylglycerol (MGDG) and kaempferol. The abc1k7 abc1k8 double mutant accumulates strong levels of oxylipin-conjugated MGDG and DGDG (PubMed:25809944).
messages: Mostly expressed in leaves and flowers, and, to a lower extent, in roots.
messages: chloroplast thylakoid membrane
messages: plastoglobule

3702:AT3G27620
gene id: 3702:AT3G27620
uniprot id: A0A654FBA7
uniprot id: O22048
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the alternative oxidase family.
messages: Binds 2 iron ions per subunit.
messages: Catalyzes the cyanide-resistant oxidation of ubiquinol and the reduction of molecular oxygen to water, but does not translocate protons and consequently is not linked to oxidative phosphorylation. May increase respiration when the cytochrome respiratory pathway is restricted, or in response to low temperatures (By similarity).
messages: Expressed in roots, stems, leaves, cotyledons and flowers. High expression in stamens.
messages: Expressed ubiquitously. Not detected during germination.
messages: Homodimer; disulfide-linked.
messages: Mitochondrion inner membrane
messages: No effect of antimycin A. Up-regulated by ethylene, high light, glucose, cysteine, mannitol, salicylic acid and cold treatments.

3702:AT4G38790
gene id: 3702:AT4G38790
uniprot id: A0A178UR84
uniprot id: Q8LD89
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERD2 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G56960
gene id: 3702:AT5G56960
uniprot id: A0A1P8BAL1
uniprot id: Q9LTS4
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT5G44568
gene id: 3702:AT5G44568
uniprot id: Q570K8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates upon infection by generalist herbivores such as Spodoptera littoralis (PubMed:35401621). Induced by wounding (PubMed:35401621). Triggered by salicylic acid (SA) (PubMed:31001913).
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:33514716, PubMed:34535661, PubMed:31001913). Inhibits root growth (PubMed:34535661). Prevents general growth and development (PubMed:31001913). Exhibits antibacterial effects against Pseudomonas syringae pv. tomato DC3000, Ralstonia solanacearum, Bacillus subtilis and Agrobacterium tumefaciens, thus being an antimicrobial peptide (AMP) (PubMed:31001913).
messages: Cell membrane
messages: Increased growth and fresh weight.
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mostly expressed in leaves and seedlings shoots, and, to a lower extent, in roots, stems, siliques, seeds and flowers.
messages: apoplast

3702:AT5G57190
gene id: 3702:AT5G57190
uniprot id: A0A178UED8
uniprot id: F4KAK5
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
messages: Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Contributes only to a minor proportion of PtdEtn production.
messages: Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.
messages: Highly expressed in flowers and at lower levels in leaves.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The autoendoproteolytic cleavage occurs by a canonical serine protease mechanism, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain. During this reaction, the Ser that is part of the protease active site of the proenzyme becomes the pyruvoyl prosthetic group, which constitutes an essential element of the active site of the mature decarboxylase.
messages: No visible phenotype under normal growth conditions.
messages: The C2 domains have an essential, but non-catalytic function. They may facilitate interactions with other proteins and are required for lipid transport function.
messages: Vacuole membrane

3702:AT2G35210
gene id: 3702:AT2G35210
uniprot id: O82171
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed specifically in roots, pollen grains and pollen tubes.
messages: GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Activates ARF1 and ARF2. Required for female gametophyte development. Involved in root hair and pollen tube growth.
messages: Golgi apparatus
messages: Plants are arrested during endosperm development and have altered root hair development and pollen tube elongation.
messages: The C-terminal domain (317-395) is responsible for the Golgi localization.

3702:AT2G30490
gene id: 3702:AT2G30490
uniprot id: B1GV49
uniprot id: P92994
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Catalyzes the first oxidative step of the phenylpropanoid pathway in higher plants by transforming trans-cinnamate into p-coumarate (By similarity). The compounds formed by this pathway are essential components for lignification, pollination, and defense against ultraviolet light, predators and pathogens (PubMed:19682296).
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Induced by wounding.
messages: Membrane

3702:AT1G62950
gene id: 3702:AT1G62950
uniprot id: A0A178WK49
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G34810
gene id: 3702:AT2G34810
uniprot id: O64745
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT3G29430
gene id: 3702:AT3G29430
uniprot id: Q9LIA0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.
messages: Monomer.
messages: chloroplast

3702:AT4G10950
gene id: 3702:AT4G10950
uniprot id: A0A1P8B785
uniprot id: F4JN67
names: Similarity
messages: Belongs to the 'GDSL' lipolytic enzyme family.

3702:AT1G05680
gene id: 3702:AT1G05680
uniprot id: A0A0K1SBE8
uniprot id: A0A654E793
uniprot id: Q9SYK9
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: By H(2)O(2) and abiotic stresses.
messages: Expressed in roots, cotyledons and leaf hydathodes.
messages: Glucosyltransferase that acts on the auxin indole-3-butyric acid (IBA). Mediates abiotic stress responses and stress-induced morphological adaptations by regulating auxin homeostasis. Possesses low activity in vitro on jasmonate (JA) and the synthetic auxin analog naphthaleneacetic acid (NAA).
messages: No visible phenotype under normal growth condition.
messages: Plants overexpressing UGT74E2 develop more compact rosette structure with shorter petioles, dark-green leaves and a shoot branching phenotype after inflorescence emergence. Mature plants are shorter than wild-type. Over-expression of UGT74E2 increases plant tolerance to osmotic stress.

3702:AT1G71390
gene id: 3702:AT1G71390
uniprot id: A0A1P8ASL2
uniprot id: Q9C9H6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in the perception of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristems maintenance.
messages: Membrane

3702:AT4G08990
gene id: 3702:AT4G08990
uniprot id: Q9M0S8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
messages: Expressed at low levels in vegetative and floral organs.
messages: Maintains chromatin CpG methylation that plays a role in genomic imprinting, regulation of embryogenesis and seed viability. Required for proper patterns of CG DNA methylation in dividing cells (By similarity).
messages: Nucleus

3702:AT2G07691
gene id: 3702:AT2G07691
uniprot id: A0A384LNK3
uniprot id: P92562
names: Caution
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07691) is demonstrated.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G48000
gene id: 3702:AT1G48000
uniprot id: A0A178WKB2
uniprot id: Q94CJ3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G58280
gene id: 3702:AT1G58280
uniprot id: F4IBB2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphoglycerate mutase family.
messages: May play a role in carbohydrates metabolism.
messages: chloroplast

3702:AT3G06650
gene id: 3702:AT3G06650
uniprot id: A0A178V742
uniprot id: Q9C522
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. May supply substrate to the cytosolic acetyl-CoA carboxylase, which generates the malonyl-CoA used for the synthesis of a multitude of compounds, including very long chain fatty acids and flavonoids. Required for normal growth and development and elongation of C18 fatty acids to C20 to C24 fatty acids in seeds. In contrast to all known animal ACL enzymes having a homomeric structure, plant ACLs are composed of alpha and beta chains (By similarity).
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: cytosol

3702:AT3G56300
gene id: 3702:AT3G56300
uniprot id: A0A1I9LQR9
uniprot id: Q9LYL3
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: cytosol

3702:AT3G22530
gene id: 3702:AT3G22530
uniprot id: A0A384KCG8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G28020
gene id: 3702:AT2G28020
uniprot id: A0A654F7I2
uniprot id: Q8S8F0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Mediator complex subunit 20 family.
messages: Nucleus

3702:AT5G60340
gene id: 3702:AT5G60340
uniprot id: A0A5S9YFX2
uniprot id: Q9FJI1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family. AK6 subfamily.
messages: Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity.
messages: Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Preferred phosphate donor and acceptor are ATP and AMP, respectively. Has also ATPase activity (By similarity).
messages: Decreased stem growth.
messages: Interacts with RPS14A.
messages: Nucleus

3702:AT1G19770
gene id: 3702:AT1G19770
uniprot id: A0A178WHV5
uniprot id: Q9FXH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Cell membrane
messages: Expressed in seedlings, leaves, embryos, ovules, seeds and the root and shoot meristems. In heart-stage embryos, detected in cells that failed to respond to cytokinins, including the prospective cotyledons.
messages: Membrane
messages: Purine permease implicated in ATP-dependent cytokinin translocation that controls the spatiotemporal landscape of cytokinin signaling. Depletes ligands from the apoplast, which leads to a suppression of the cytokinin response.

3702:AT5G57440
gene id: 3702:AT5G57440
uniprot id: Q8VZP1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a glycerol-3-phosphatase with higher stereospecificity for L-glycerol-3-phosphate than DL-glycerol-3-phosphate.
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.
messages: Cytoplasm
messages: Ubiquitous with highest expression in siliques. Mainly restricted to the meristem of immature flower and vascular elements of the root, shoot, leave, siliqua and developing embryo (at the protein level).

3702:AT1G20816
gene id: 3702:AT1G20816
uniprot id: A0A178W2U6
uniprot id: Q6ID99
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plastid outer envelope porin OEP21 (TC 1.B.29) family.
messages: Membrane
messages: Voltage-dependent rectifying anion channel that facilitates the translocation between chloroplast and cytoplasm of phosphorylated carbohydrates such as triosephosphate, 3-phosphoglycerate and inorganic phosphate (Pi) depending of ATP to triosephosphate ratio in the plastidial intermembrane space; in high triosephosphate/ATP conditions (e.g. photosynthesis), export of triosphosphate from chloroplast (outward rectifying channels), but in high ATP/triosephosphate conditions (e.g. dark phase), import of phosphosolutes (inward rectifying channels) (By similarity).
messages: Voltage-dependent rectifying anion channel that facilitates the translocation between chloroplast and cytoplasm of phosphorylated carbohydrates such as triosephosphate, 3-phosphoglycerate and inorganic phosphate (Pi) depending of ATP to triosephosphate ratio in the plastidial intermembrane space; in high triosephosphate/ATP conditions (e.g. photosynthesis), export of triosphosphate from chloroplast (outward rectifying channels), but in high ATP/triosephosphate conditions (e.g. dark phase), import of phosphosolutes (inward rectifying channels).
messages: chloroplast outer membrane
messages: etioplast membrane

3702:AT4G29570
gene id: 3702:AT4G29570
uniprot id: A0A5S9XX09
uniprot id: Q9XEX4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Binds 1 zinc ion.
messages: Homodimer.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

3702:AT3G14330
gene id: 3702:AT3G14330
uniprot id: Q9LUL5
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT5G20410
gene id: 3702:AT5G20410
uniprot id: O82730
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Auxin activates expression during Pi starvation, whereas cytokinin represses it.
messages: Belongs to the glycosyltransferase 28 family.
messages: Expressed mainly in floral buds. Detected in roots, leaves, stems, siliques and pollen tubes.
messages: Induced by phosphate deprivation (PubMed:11553816, PubMed:14730084, PubMed:16762032). Induced in rosette leaves when grown in acidic soil (PubMed:31201686).
messages: Inhibited by galvestine-1.
messages: Involved in the synthesis of monogalactosyldiacylglycerol, the major structural component of photosynthetic membranes and in the chloroplast envelope biogenesis. Can use both prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the eukaryotic one. Plays a minor role in galactolipid synthesis in chloroplasts (PubMed:11553816). Is required for membrane lipid remodeling in phosphate-starved roots (PubMed:18808455, PubMed:31201686). Acts as the minor factor involved in digalactosyldiacylglycerol (DGDG) biosynthesis in phosphate-starved roots (PubMed:18808455). Does not seem to be required for plant growth under nutrient-sufficient conditions (PubMed:18808455). Required for membrane lipid remodeling in plants grown in acidic conditions (PubMed:31201686).
messages: Low and continuous expression throughout whole developmental stages.
messages: chloroplast outer membrane

3702:AT1G18990
gene id: 3702:AT1G18990
uniprot id: Q9LMC8
names: Function
names: Subcellular Location Annotation
messages: Membrane
messages: Probable membrane-anchored myosin receptors.

3702:AT4G28110
gene id: 3702:AT4G28110
uniprot id: Q9M0J5
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Induced by salt stress (PubMed:19211694, PubMed:25060192). Induced by osmotic stress (PubMed:19211694). Induced by abscisic acid (PubMed:25060192).
messages: Interacts with MPK6.
messages: Nucleus
messages: Phosphorylated at Ser-251 by MPK6 in response to salt stress. Phosphorylation is required for its function in salt stress tolerance.
messages: Transcription factor involved in salt stress response. Confers tolerance to salt stress (PubMed:22575450). Involved in distinct cellular processes in response to osmotic stress, including control of primary metabolism and negative regulation of short-term transcriptional responses to osmotic stress (PubMed:19211694). Can activate the steps necessary for aliphatic suberin synthesis and deposition of cell wall-associated suberin-like lamellae. Involved in the production of aliphatic suberin under abiotic stress conditions (PubMed:25060192).

3702:AT1G19100
gene id: 3702:AT1G19100
uniprot id: A0A654EB60
uniprot id: Q56Y74
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulation of siRNAs and slight reductions of repressive epigenetic modifications (e.g. decreases in DNA methylation and H3K9me2 and increase in H3ac) at target sequences, especially in the shoot apical meristem after rosette leaves development, leading to derepression of silenced-genes (PubMed:22560611, PubMed:23675613). Stochastic silencing phenotype due to randomized RNA-directed DNA methylation (RdDM) (PubMed:23675613). Impaired gene silencing due to decondensation of chromocenters leading to the derepression of DNA-methylated genes and transposable elements (TEs); DNA and histone methylation seems normal (PubMed:22555433, PubMed:24799676, PubMed:27171427).
messages: Belongs to the MORC ATPase protein family.
messages: Homodimer and heterodimers with MORC1/CRT1 and MORC2 (PubMed:24465213, PubMed:24799676). Interacts directly with SUVH9 (PubMed:24465213). Component of an RNA-directed DNA methylation (RdDM) complex that contains at least MORC6, MORC1/CRT1, MORC2, SWI3D and SUVH9 (PubMed:24465213). Stimulated by interaction with DMS3 (PubMed:22560611). Interacts with IDN2, SWI3B, SWI3C and SWI3D (PubMed:27171427).
messages: Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing (PubMed:22560611, PubMed:23675613, PubMed:27171427). Together with SUVH2 and SUVH9, regulates the silencing of some transposable elements (TEs) (PubMed:27171427). Exhibits ATPase activity (PubMed:22560611). May also be involved in the regulation of chromatin architecture/condensation to maintain gene silencing (PubMed:22555433, PubMed:27171427). Binds DNA/RNA in a non-specific manner and exhibits endonuclease activity. Probably involved in DNA repair (By similarity). Positive regulator of defense against the oomycete Hyaloperonospora arabidopsidis (Hpa) (PubMed:27171361).
messages: Nucleus
messages: Stimulated by DMS3.

3702:AT2G35010
gene id: 3702:AT2G35010
uniprot id: O64764
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. Plant O-type subfamily.
messages: Mitochondrion matrix
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. Possesses insulin disulfide bonds reducing activity. Reduced by thioredoxin reductases NTRA and NTRB.

3702:AT5G48120
gene id: 3702:AT5G48120
uniprot id: Q0WVF8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MET18/MMS19 family.
messages: Cytoplasm
messages: May select specific target apoproteins to which a Fe-S cluster produced by the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) pathway is transferred.
messages: No visible phenotype.
messages: Nucleus
messages: Part of a complex composed of AE7, CIA1, MMS19 and NAR1. Interacts with AE7.

3702:AT5G51140
gene id: 3702:AT5G51140
uniprot id: A0A178UGD1
uniprot id: F4KBV6
uniprot id: Q9LU60
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

3702:AT3G15140
gene id: 3702:AT3G15140
uniprot id: A0A178VLR2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G39650
gene id: 3702:AT5G39650
uniprot id: A0A178U7T9
uniprot id: Q9FK96
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by DUO1 in sperm cells (SC) of mature pollen.
messages: Belongs to the plant DMP1 protein family.
messages: Endoplasmic reticulum membrane
messages: Involved in membrane remodeling.
messages: Restricted to flowers and pollen.
messages: Vacuole membrane

3702:AT1G49030
gene id: 3702:AT1G49030
uniprot id: Q9M9A5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in heavy metals transport.
messages: Membrane

3702:AT3G01470
gene id: 3702:AT3G01470
uniprot id: A0A178VBZ2
uniprot id: Q02283
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Interacts with DNA as homodimer (PubMed:9405140). Interacts with TBP2 (PubMed:24531799).
messages: Nucleus
messages: Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'.
messages: Transcription factor.
messages: Widely expressed.

3702:AT1G19485
gene id: 3702:AT1G19485
uniprot id: A0A654EBC9
uniprot id: F4HP69
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G05150
gene id: 3702:AT5G05150
uniprot id: Q9FHK8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat PROPPIN family.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Preautophagosomal structure membrane
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy (By similarity).
messages: The first protein part may form a beta-propeller domain involved in specific binding to phosphatidylinositol 3,5-bisphosphate (PIP2), leading to the association of the protein to the membrane.
messages: Vacuole membrane

3702:AT4G13890
gene id: 3702:AT4G13890
uniprot id: A0A1P8B5D5
uniprot id: Q9SVM4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the interconversion of serine and glycine.
messages: Cytoplasm
messages: Homotetramer.
messages: Interconversion of serine and glycine.

3702:AT3G08640
gene id: 3702:AT3G08640
uniprot id: Q9C9Z2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RETICULATA family.
messages: Defects in embryo development, seedling germination and early growth. Pale interveinal phenotype due to marked reduction in the density of mesophyll cells in interveinal regions of leaves.
messages: During embryo development, expressed from the heart stage onwards and restricted to the adaxial side of the cotyledons in mature embryos.
messages: Expressed in root meristem, root vasculature, distal region of young leaf primordia, leaf bundle sheath cells, hydathodes and pollen grains.
messages: May play a role in leaf development. Required for leaf mesophyll cell division in the early stages of leaf organogenesis.
messages: chloroplast membrane

3702:AT5G44510
gene id: 3702:AT5G44510
uniprot id: Q9FI14
names: Domain
names: Function
messages: TIR-NB-LRR receptor-like protein that contributes to disease resistance induced by the Pseudomonas syringae type III effector AvrB. Acts additively with RPM1 to generate a full disease resistance response to P.syringae expressing this type III effector.
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT5G49910
gene id: 3702:AT5G49910
uniprot id: Q9LTX9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Acts redundantly with HSP70-6 in the thermotolerance of germinating seeds. Plays an important role in the protein precursor import into chloroplasts.
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: By heat shock.
messages: Defective in protein import into chloroplasts during early developmental stages.
messages: Down-regulated during seed maturation. Up-regulated during germination.
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions.
messages: May be due to an intron retention.
messages: chloroplast stroma

3702:AT3G57270
gene id: 3702:AT3G57270
uniprot id: Q9M2M0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: May play a role in plant defense against pathogens.
messages: Secreted

3702:AT5G25330
gene id: 3702:AT5G25330
uniprot id: A0A654G4A8
uniprot id: Q494P1
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G17290
gene id: 3702:AT5G17290
uniprot id: Q9FFI2
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG5 family.
messages: Conjugated to ATG12.
messages: Conjugated to ATG12; which is essential for autophagy. Conjugation with ATG12 involves ATG7 as an E1-like activating enzyme and ATG10 as an E2-like conjugating enzyme (By similarity).
messages: Cytoplasm
messages: Mutant plants are hypersensitive to nitrogen or carbon starvation (PubMed:16040659). Early senescence phenotype (PubMed:16040659, PubMed:19773385). Hyper accumulation of salicylic acid (SA) (PubMed:19773385). Increased number of peroxisomes and accumulation of peroxisomal proteins (PubMed:24463818).
messages: Required for autophagy. Conjugation to ATG12 is essential for plant nutrient recycling (PubMed:16040659). Involved in a negative feedback loop that modulates NPR1-dependent salicylic acid (SA) signaling and limits senescence and immunity-related programmed cell death (PCD) in plants (PubMed:19773385). Involved in complete proteolysis of chloroplast stroma proteins in senescent leaves (PubMed:23327451). Involved in the degradation of damaged peroxisomes (PubMed:24463818).
messages: Ubiquitous.

3702:AT2G31400
gene id: 3702:AT2G31400
uniprot id: Q9SIC9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Defective in retrograde plastid-to-nucleus signaling.
messages: Involved in nuclear gene expression via the retrograde plastid-to-nucleus signaling (PubMed:17395793, PubMed:19140931, PubMed:20605896, PubMed:21673514). Plastid signals that depend on GUN1 can affect photomorphogenesis developments, such as cotyledon opening and expansion, anthocyanin biosynthesis, and hypocotyl elongation (PubMed:19140931, PubMed:21673514).
messages: chloroplast

3702:AT1G07730
gene id: 3702:AT1G07730
uniprot id: A0A178WJC8
uniprot id: Q9LQQ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT1G66970
gene id: 3702:AT1G66970
uniprot id: A0A178WCT5
uniprot id: Q7Y208
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: Cell membrane
messages: Expressed in rosette and cauline leaves, stems, flowers and siliques.
messages: Hydrolyzes glycerolphosphoglycerol, glycerophosphocholine and glycerophosphoethanolamine in vitro.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G03620
gene id: 3702:AT2G03620
uniprot id: A0A654F2H3
uniprot id: Q9ZPR4
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.
messages: Expressed in the whole plant.
messages: Has the ability to complement a mutant in yeast lacking magnesium transport capability.
messages: Magnesium transporter that may mediate the influx of magnesium.
messages: Membrane

3702:AT5G05170
gene id: 3702:AT5G05170
uniprot id: A0A384K963
uniprot id: Q941L0
uniprot id: W8Q6G0
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the primary cell wall formation, especially in roots.
messages: Cell membrane
messages: Expressed in young plants, flowers and roots, and to a lower extent in leaves and stems. Localized in all cells except meristematic cells. Accumulates particularly in root caps, root hairs, epidermal layer, midveins of leaves and anthers. Not present in old tissues.
messages: Golgi apparatus membrane
messages: Homodimer (PubMed:33729990). Interacts with CESA1 and CESA6. Interacts with STL1 and STL2, but not with GOT1 (PubMed:27277162). Binds to CSI1 and CSI3 (PubMed:20616083, PubMed:24368796). Interacts with PAT24/TIP1 (PubMed:35644016).
messages: Membrane
messages: Mostly expressed in cotyledons during all steps of embryogenesis, and decrease toward the bent-cotyledon stage.
messages: Mutants cev1 are dark green and contains more jasmonates and ethylene, that leads to shorter and thickened hypocotyls and roots, with prolific root hairs, and the accumulation of purple anthocyanins. They exhibit constitutive and high expression in leaves lamina of vegetative storage proteins (VSP1 and VSP2), basic chitinase CHI-B and plant defensin PDF1.2. In addition, this mutation confers resistance to powdery mildew pathogens such as E.cichoracearum, E.orontii and O.lycopersicum, to the bacterial pathogen P.syringae pv maculicola, and also to the green peach aphid M.persicae (PubMed:11340179). The double mutant tip1-5 ixr1-2 exhibits a reduced plant growth with stronger developmental defects phenotypes than each single mutant and associated with thin cell walls and reduced cellulose content in iterfascicular fiber cells (PubMed:35644016).
messages: Palmitoylated, in part by PAT24/TIP1.

3702:AT2G30600
gene id: 3702:AT2G30600
uniprot id: A0A1P8B014
uniprot id: F4INV5
uniprot id: Q8LEV3
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT2G07701
gene id: 3702:AT2G07701
uniprot id: P93299
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07701) is not demonstrated.
messages: Mitochondrion

3702:AT1G53440
gene id: 3702:AT1G53440
uniprot id: C0LGG9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT4G18030
gene id: 3702:AT4G18030
uniprot id: A0A178V1V4
uniprot id: Q94EJ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT1G12520
gene id: 3702:AT1G12520
uniprot id: A0A654E995
uniprot id: Q9LD47
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds 2 copper ions per subunit.
messages: By copper and senescence. Down-regulated by heat stress.
messages: Copper chaperone for the superoxide dismutases CSD1, CSD2 and CSD3. Binds copper ions and delivers them specifically to CSDs. Is required for assistance in CSDs disulfide bond formation and thereby activation of CSDs. May be involved in the negative regulation of heat stress-responsive genes and thermotolerance.
messages: Expressed in roots, shoots, stems and flowers, and at lower levels in rosette and cauline leaves.
messages: In the C-terminal section; belongs to the Cu-Zn superoxide dismutase family.
messages: Interacts with CSD1.
messages: No visible phenotype under normal growth conditions, but mutant plants have increased tolerance to heat stress.
messages: chloroplast
messages: cytosol

3702:AT1G58370
gene id: 3702:AT1G58370
uniprot id: A0A1P8AWH8
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 10 (cellulase F) family.
messages: Binds to and hydrolyzes insoluble and soluble xylan substrates (By similarity). Exhibits xylanase activity (PubMed:12154138).
messages: In seedlings, present in the root, hypocotyl and cotyledon veins. In roots, excluded from the root tip, otherwise observed in the endodermis, pericycles and vascular bundles, except vessels. Expressed in the root differentiation zone, especially during root hair formation. In mature plants, mostly detected in vascular bundles, but not in vessel cells.
messages: Predominantly expressed in vascular bundles, but not in vessel cells. Mostly expressed in stems, at lower levels in roots, and weakly in inflorescences and seedlings.
messages: The GH10 domain binds to xylan.
messages: cell wall

3702:AT2G16970
gene id: 3702:AT2G16970
uniprot id: A0A1P8AX75
uniprot id: A0A1P8AX77
uniprot id: A0A1P8AXB0
uniprot id: A0A1P8AXB4
uniprot id: A0A1P8AXC3
uniprot id: F4IMD6
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G26570
gene id: 3702:AT5G26570
uniprot id: A0A178UG93
uniprot id: Q6ZY51
names: Caution
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PEP-utilizing enzyme family.
messages: Circadian regulation. Induced during light phase and repressed during dark phase.
messages: Homodimer.
messages: In all starch containing tissues (e.g. roots, leaves, stems, inflorescence and siliques).
messages: Mediates the incorporation of phosphate into starch-like phospho-alpha-glucan, mostly at the C-3 position of glucose units. Required for starch degradation, suggesting that the phosphate content of starch regulates its degradability.
messages: The N-terminal domain contains the alpha-glucan binding site, the central domain the pyrophosphate/phosphate carrier histidine, and the C-terminal domain the ATP binding site.
messages: The reaction takes place in three steps, mediated by a phosphocarrier histidine residue located on the surface of the central domain. The two first partial reactions are catalyzed at an active site located on the C-terminal domain, and the third partial reaction is catalyzed at an active site located on the N-terminal domain. For catalytic turnover, the central domain swivels from the concave surface of the C-terminal domain to that of the N-terminal domain (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT4G00820
gene id: 3702:AT4G00820
uniprot id: A0A654FKQ6
uniprot id: F4JHN2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: cytoskeleton

3702:AT2G46620
gene id: 3702:AT2G46620
uniprot id: A0A5S9X7I5
uniprot id: F4IJ77
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Membrane

3702:AT4G27020
gene id: 3702:AT4G27020
uniprot id: A0A178V3G5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G48580
gene id: 3702:AT5G48580
uniprot id: Q38936
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family.
messages: Endoplasmic reticulum lumen
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).

3702:AT3G58570
gene id: 3702:AT3G58570
uniprot id: Q9M2F9
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX3/DED1 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT3G46080
gene id: 3702:AT3G46080
uniprot id: Q9LX85
names: Function
names: Induction
names: Subcellular Location Annotation
messages: By heat stress.
messages: Nucleus
messages: Probable transcription factor that may be involved in stress responses.

3702:AT4G34960
gene id: 3702:AT4G34960
uniprot id: A0A178UVP1
uniprot id: A0A1P8B5U2
uniprot id: O49605
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Endoplasmic reticulum
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: Ubiquitous.

3702:AT5G63170
gene id: 3702:AT5G63170
uniprot id: A0A5S9YGK6
uniprot id: Q9FMK6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G20010
gene id: 3702:AT3G20010
uniprot id: A0A1I9LTA5
uniprot id: A0A1I9LTA6
uniprot id: A0A1I9LTA7
uniprot id: Q9LHE4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
messages: Interacts with SUVR2 (PubMed:25420628, PubMed:25425661). Interacts with itself (PubMed:25420628).
messages: Nucleus
messages: Probable helicase-like transcription factor involved in transcriptional gene silencing. Associates with SUVR2 and contributes to transcriptional gene silencing at RNA-directed DNA methylation (RdDM) target loci but also at RdDM-independent target loci. May be involved in nucleosome positioning to form ordered nucleosome arrays on chromatin (PubMed:25420628). Associates with SUVR2 and functions redundantly with FRG2. Required for the efficient methylation of a broad range of RdDM target loci (PubMed:25425661).

3702:AT2G45040
gene id: 3702:AT2G45040
uniprot id: A0A5S9X7L5
uniprot id: Q8GWW6
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase M10A family. Matrix metalloproteinases (MMPs) subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Can bind about 5 Ca(2+) ions per subunit.
messages: Cell membrane
messages: Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Active on myelin basic protein (MBP) and, to some extent, on McaPLGLDpaAR-NH(2) (QF24) and beta-casein (PubMed:24156403).
messages: Mostly expressed in flowers and stems, and, to a lower extent, in leaves and roots.
messages: Repressed by acetohydroxamic acid (AHA).
messages: Starts to accumulate in 7-10 days old plant leaves.
messages: The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme.

3702:AT1G26480
gene id: 3702:AT1G26480
uniprot id: A0A178WJF9
uniprot id: Q9C5W6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 14-3-3 family.
messages: Cytoplasm
messages: Expressed in flowers.
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
messages: Nucleus

3702:AT1G78500
gene id: 3702:AT1G78500
uniprot id: A0A654EQB4
uniprot id: Q9SYN1
names: Function
names: Similarity
messages: Belongs to the terpene cyclase/mutase family.
messages: Multifunctional enzyme that converts oxidosqualene to lupeol, bauerenol, alpha-amyrin, taraxasterol, psi-taraxasterol, multiflorenol, alpha-seco-amyrin and beta-seco-amyrin.

3702:AT1G07040
gene id: 3702:AT1G07040
uniprot id: A0A178W6Z0
uniprot id: Q9LMJ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2-oxoadipate dioxygenase/decarboxylase family.
messages: Catalyzes the decarboxylation and hydroxylation of 2-oxoadipate (2OA) to form D-2-hydroxyglutarate (D-2-HGA) (PubMed:32523014). Is involved in a D-lysine catabolic pathway (PubMed:32523014).
messages: Delayed germination, compromised development, cholortic phenotype with impaired growth, due to lysine accumulation.
messages: chloroplast

3702:AT3G59890
gene id: 3702:AT3G59890
uniprot id: A0A178V6P3
uniprot id: Q8LB01
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DapB family.
messages: Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
messages: Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction.
messages: chloroplast

3702:AT1G26460
gene id: 3702:AT1G26460
uniprot id: Q9FZD1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G68530
gene id: 3702:AT1G68530
uniprot id: A0A178WCX7
uniprot id: Q9XF43
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Contributes to cuticular wax and suberin biosynthesis. Involved in both decarbonylation and acyl-reduction wax synthesis pathways. Required for elongation of C24 fatty acids, an essential step of the cuticular wax production (PubMed:10330468, PubMed:11041893). Major condensing enzyme for stem wax and pollen coat lipid biosynthesis (PubMed:12467640).
messages: Endoplasmic reticulum membrane
messages: In epidermal cells of aerial tissues and in the tapetum of anthers near maturity (PubMed:10330468, PubMed:12177469). Expressed in siliques, flowers and leaves (PubMed:18465198).
messages: Plants have no wax crystals and are male sterile.
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Up-regulated by osmotic stress and abscisic acid and down-regulated by darkness (PubMed:12177469, PubMed:18465198). Down-regulated by low temperature and up-regulated by salt and drought (PubMed:18465198).
messages: Strongly inhibited by metazachlor and mefluidide.

3702:AT2G31890
gene id: 3702:AT2G31890
uniprot id: Q8VZE7
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Down-regulated during infection with the bacterial pathogen Pseudomonas syringae pv. tomato avirulent avrRpt2 strain.
messages: RNA-binding protein required for chloroplast 16S rRNA maturation, an important process which supports chloroplast gene expression and biogenesis. Binds to 16S rRNA precursor and is involved in its 5'-end processing (PubMed:24585838). May act as negative regulator of defense response against bacterial pathogens (PubMed:18003861).
messages: Retarded growth and photobleaching phenotype (PubMed:18003861, PubMed:24585838). Enhanced resistance to the bacterial pathogen Pseudomonas syringae pv. tomato (PubMed:18003861).
messages: chloroplast nucleoid

3702:AT5G12980
gene id: 3702:AT5G12980
uniprot id: A0A178UJH3
uniprot id: Q9LXU1
names: Similarity
messages: Belongs to the CNOT9 family.

3702:AT5G47840
gene id: 3702:AT5G47840
uniprot id: A0A1P8B9K9
uniprot id: Q9FIJ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family.
messages: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. Plays a major role in the equilibration of adenylates and de novo synthesis of ADP in the plastid stroma.
messages: Monomer.
messages: Seedling lethality when homozygous, due to loss of chloroplast integrity, causing a bleached phenotype from early embryo to seedling development.
messages: chloroplast stroma

3702:AT4G17140
gene id: 3702:AT4G17140
uniprot id: F4JNE2
uniprot id: F4JNE3
uniprot id: F4JNE4
names: Similarity
messages: Belongs to the VPS13 family.

3702:AT1G79540
gene id: 3702:AT1G79540
uniprot id: Q9SAJ5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G01820
gene id: 3702:AT5G01820
uniprot id: Q9LZW4
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: By light in a cytokinin-dependent manner and N(6)-benzylaminopurine (BA). Also induced by sucrose, glucose and fructose. Induced by several abiotic stresses like salt, cold, heat, oxidative, drought, PEG8000, glucose treatments as well exogenous abscisic acid (ABA) application (PubMed:25058458).
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: Cytoplasm
messages: First observed in imbibed seeds. Mostly localized in hypocotyls during germination and in seedlings. In mature plants, confined to vascular tissues of leaves and roots. In flowers, expressed in the vascular bundle of the stamen filament and in the stigma, where the filament joins the pistil.
messages: Increased sensitivity to glucose.
messages: Interacts with CBL2 (PubMed:11577192, PubMed:19832944, PubMed:18237745, PubMed:25058458). Interacts with CBL3 (PubMed:19832944, PubMed:25058458). Interacts with CBL8 (PubMed:19832944). Interacts with CBL9 (PubMed:25058458). Interacts with KIN10 and KIN11 (PubMed:25058458).
messages: Nucleus
messages: Predominant in roots, cauline leaves, and flowers (PubMed:11577192). Ubiquitous with highest expression in 7-day-old seedlings and flower buds, followed by that in cauline leaves and young siliques (PubMed:25058458).
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT3G17310
gene id: 3702:AT3G17310
uniprot id: Q8H1E8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. DRM-methyltransferase family.
messages: Catalytically inactive DNA methyltransferase that acts as regulatory factor for DRM2-mediated DNA methylation. Required for maintenance of non-CpG DNA methylation. Required for normal establishment and maintenance of RNA-directed DNA methylation (RdDM) and accumulation of specific repeat-associated small interfering RNAs (siRNAs) (PubMed:21060858, PubMed:25316414, PubMed:25561521). Required for nucleolus organizer region (NOR) nuclear organization during interphase (PubMed:25316414). Acts downstream of the production of siRNAs. May promote RNA polymerase V (Pol V) transcriptional elongation or assist in the stabilization of Pol V transcripts (PubMed:25561521).
messages: Interacts with Pol V.
messages: Lacks the conserved tripeptide Ser-Pro-Cys in position 672 necessary for the methyltransferase activity in DRM protein (AC Q9M548).
messages: Nucleus

3702:AT3G52380
gene id: 3702:AT3G52380
uniprot id: A0A178VGE7
uniprot id: Q39061
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Could be involved in splicing and/or processing of chloroplast RNAs.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT4G08150
gene id: 3702:AT4G08150
uniprot id: P46639
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/KNOX homeobox family.
messages: Expressed in the vegetative meristem. Present in the base of flower primordia (PubMed:26390296).
messages: May form heterodimeric complex with the TALE/BELL proteins BEL1, BLH2, BLH8/PNF and BLH9/PNY (PubMed:11701881, PubMed:12897247, PubMed:16741748, PubMed:17873098). Interacts with OFP1, OFP2, OFP4, OFP6 and OFP12 (PubMed:15781858). Interacts with CCT7 and CCT8 (PubMed:21868675). Interacts with KNATM-B (PubMed:18398054). Binds to AGO10/PNH (PubMed:26390296). Interacts with BZIP30 (PubMed:27402171).
messages: May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state, and its expression disappears at the same time the shoot apex undergoes the transition from vegetative to reproductive development (PubMed:11934861). Positive regulator of LATERAL ORGAN BOUNDARIES (LOB) (PubMed:11934861). Probably binds to the DNA sequence 5'-TGAC-3' (PubMed:11934861). Able to traffic from the L1 to the L2/L3 layers of the meristem, presumably through plasmodesmata (PubMed:12900451).
messages: Negatively regulated by ASYMMETRIC LEAVES1 (AS1) and ASYMMETRIC LEAVES2 (AS2).
messages: Nucleus

3702:AT5G05440
gene id: 3702:AT5G05440
uniprot id: A0A5S9Y1M7
uniprot id: Q9FLB1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Membrane
messages: Monomer (PubMed:21658606). Homodimer. Binds ABA on one subunit only. Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Binds both (-)-ABA and (+)-ABA (PubMed:23844015). Interacts with HAB1, ABI1 and ABI2, and possibly with other PP2Cs (PubMed:19624469, PubMed:19874541, PubMed:19898420).
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) in an ABA-independent manner but more efficiently when activated by ABA. Confers enhanced sensitivity to ABA (PubMed:19407143, PubMed:19624469, PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT3G15920
gene id: 3702:AT3G15920
uniprot id: Q9LSB9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Acts as an effector of RABF2A and RABF2B. Involved in vacuolar transport of storage proteins. Regulates membrane trafficking to protein storage vacuoles (PSVs). Binds specifically to phosphatidylinositol 3-monophosphate (PtdIns3P).
messages: Endosome membrane
messages: Interacts (via PX domain) with RABF2A and RABF2B.
messages: No visible phenotype under normal growth conditions, but the double mutant plants erex and erel1 exhibit severe growth retardation at a juvenile stage.
messages: cytosol

3702:AT2G28315
gene id: 3702:AT2G28315
uniprot id: A0A178VLE3
uniprot id: A0A1P8B170
uniprot id: F4IHS9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: No visible phenotype. Slight reduction of xylose content in the cell wall composition.
messages: Nucleotide-sugar transporter that transports UDP-xylose and UMP in a strict counter-exchange mode.
messages: Ubiquitous.

3702:AT2G46960
gene id: 3702:AT2G46960
uniprot id: A0A178VQG9
uniprot id: F4IK47
uniprot id: Q9ASR3
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Highly expressed in siliques.
messages: Involved in stress response (By similarity). Does not function as cytokinin hydroxylase in yeast heterologous system (Probable).
messages: Membrane
messages: No visible phenotype under normal growth conditions.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G15840
gene id: 3702:AT5G15840
uniprot id: A0A178UTB8
uniprot id: Q39057
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CONSTANS family.
messages: Expressed in leaves, shoots and shoot apical meristem. Detected in the vascular tissue of the hypocotyl, the cotyledons and the leaves. Restricted to the protoxylem and phloem in young inflorescence stems and to the phloem only in older inflorescences. Also detected in the vascular tissue of the root.
messages: Expressed with a circadian rhythm showing a broad peak between 12 hours and dawn. Higher expression under long days.
messages: Interacts with ADO3, SPA1, SPA2, SPA3 and SPA4 (PubMed:16854975, PubMed:22628657). Interacts with MRG1 and MRG2 (via MRG domain) (PubMed:25211338). Interacts (via B-box) with MIP1A (PubMed:27015278). Interacts with AS1 to form a functional complex regulating FT expression (PubMed:21950734). Interacts with NFYC9 (PubMed:25105952). Component of a red light-dependent nuclear complex made of PHL, PHYB and CO. Interacts directly with PHL in the presence of PHYB (PubMed:24127609).
messages: Nucleus
messages: The CCT domain is essential for the interaction with SPA1.
messages: The GIGANTEA-CONSTANS-FLOWER LOCUS T (GI-CO-FT) pathway to control photoperiodic flowering under LD is conserved between Arabidopsis and rice, but the regulation of the downstream gene by the upstream regulatory gene is reversed in the two species. In Arabidopsis, GI acts as an activator of CO, which in turn activates the floral activator FT under LD conditions. In rice, GI activates HD1/CO in a similar manner to that in Arabidopsis. However, under LD conditions, HD1 suppresses HD3A/FT expression, causing the suppression of flowering.
messages: Transcription factor that acts in the long day flowering pathway and may mediate between the circadian clock and the control of flowering. Plays a role in the regulation of flowering time by acting on 'SUPPRESSOR OF OVEREXPRESSION OF CO1', 'TERMINAL FLOWER 1' and 'FLOWERING LOCUS T'. Also regulates P5CS2 and ACS10 (involved in proline and ethylene biosynthesis, respectively). Regulates the expression of NAKR1 by binding to the 5'-TGTG(N2-3)ATG-3' motif (PubMed:27255839).

3702:AT1G74310
gene id: 3702:AT1G74310
uniprot id: A0A178W7U9
uniprot id: A0A384K8A9
uniprot id: A0A5S9WUB5
uniprot id: P42730
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ClpA/ClpB family.
messages: By heat stress and oilseed rape mosaic virus (PubMed:10760238, PubMed:10760305, PubMed:11489180, PubMed:16644052, PubMed:16995899, PubMed:17144892, PubMed:7866032). Regulated by HSA32 that retards its decay in a positive feedback loop (at protein level) during recovery after heat treatment (PubMed:23439916).
messages: Molecular chaperone that plays an important role in thermotolerance. Together with HSA32, required for long-term acquired thermotolerance (LAT) in plants and naturally high basal thermotolerance observed in germinating seedlings.
messages: No visible phenotype under normal growth conditions, but germinating seeds have greatly reduced basal thermotolerance and are unable to acquire thermotolerance (PubMed:10760305, PubMed:11489180). Faster degradation of HSA32 (at protein level) (PubMed:23439916).
messages: Nucleus
messages: Over-expression of HSP101 partially reverse the sensitivity of 14 day-old seedling to heat stress.
messages: Starts to accumulate in maturing seeds 15 days after pollination and decreases rapidly during seed germination.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT1G59550
gene id: 3702:AT1G59550
uniprot id: Q94HV8
names: Caution
messages: Could be the product of a pseudogene.

3702:AT3G09920
gene id: 3702:AT3G09920
uniprot id: Q8L850
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts with CINV1.
messages: Membrane
messages: Nucleus
messages: Plays a role in sugar-mediated root development. Interaction with CINV1 induces repression of CINV1 activity and negative regulation of sugar-mediated root cell elongation.
messages: The gain-of-function mutant pip5k9-d (T-DNA insertion line) has reduced primary root length.
messages: Transiently down-regulated by cold.
messages: Widely expressed.

3702:AT3G06270
gene id: 3702:AT3G06270
uniprot id: A0A178VD51
uniprot id: Q7XJ53
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT5G07700
gene id: 3702:AT5G07700
uniprot id: Q9SPG5
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Can form complexes with MYC2, MYC3 or MYC4.
messages: Expressed in both vegetative and generative organs. Mostly present in inflorescences, flowers and seedlings, in the transition zone between roots and the foliar part, and stems, and, to a lower extent, in leaves (in midvein and trichomes).
messages: Nucleus
messages: Plays a role in determining the spatial distribution of aliphatic glucosinolates (AGLSs) within the leaf, mostly short chained. Together with MYB28/HAG1 and MYB29/HAG3, promotes aliphatic glucosinolate biosynthesis and represses indolic glucosinolate biosynthesis, but could not activate AGSL biosynthesis on its own.
messages: Primarily present around the midvein in seedlings. Accumulates gradually in expanding leaves, reaching a maximum in fully expanded leaves in both primary and secondary veins.
messages: Slightly induced by auxin (IAA) and jasmonic acid (JA). Accumulates upon mechanical stimuli (e.g. wounding) in inflorescence. Down-regulated by sulfur-deficient stress.

3702:AT5G23930
gene id: 3702:AT5G23930
uniprot id: A0A178UH45
uniprot id: Q9FF87
names: Caution
names: Similarity
messages: Belongs to the mTERF family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G20840
gene id: 3702:AT3G20840
uniprot id: Q5YGP8
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in the basal embryo region that gives rise to hypocotyl, root, and root stem cells. Expressed in the root meristem throughout embryo development.
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: By auxin accumulation.
messages: Expressed in roots, seedlings, flowers, and siliques. Also detected at low levels in leaves. In roots, specifically detected in the distal root meristem, including the QC. This tissue specificity is regulated by auxin gradient and depends on PIN proteins.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Master regulator of basal/root fate. Essential for root quiescent center (QC) and columella specification, stem cell activity, as well as for establishment of the stem cell niche during embryogenesis. Modulates the root polar auxin transport by regulating the distribution of PIN genes. Essential role in respecifying pattern and polarity in damaged roots. Direct target of the transcriptional corepressor TPL. Expression levels and patterns regulated post-transcriptionally by root meristem growth factors (RGFs).
messages: Stabilized in root meristems by reactive oxygen species (ROS) mediated oxidative post-translational modification triggered by RGF1 hormone peptide in a RITF1-dependent manner.

3702:AT1G08730
gene id: 3702:AT1G08730
uniprot id: A0A1P8APW4
uniprot id: A0A654E854
uniprot id: F4HXP9
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily.
messages: Homodimer.
messages: IQ domain mediates interaction with calmodulin.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Involved in trafficking of Golgi stacks and mitochondria.
messages: The tail domain is a globular cargo-binding domain.

3702:AT5G57140
gene id: 3702:AT5G57140
uniprot id: Q9LU72
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted

3702:AT5G46160
gene id: 3702:AT5G46160
uniprot id: A0A178UNW8
uniprot id: Q93Z17
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA in mitochondrion.
messages: Mitochondrion
messages: Mostly expressed in leaves and inflorescences, including floral organs and meristems, and, to a lower extent, in pistils.
messages: Part of the mitochondrial 50S ribosomal subunit.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G67560
gene id: 3702:AT1G67560
uniprot id: A0A178W1Z8
uniprot id: Q9CAG3
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the lipoxygenase family.
messages: Binds 1 Fe cation per subunit.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
messages: Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). 13S-lipoxygenase that can use linolenic acid as substrates.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G19190
gene id: 3702:AT1G19190
uniprot id: A0A5S9V5A5
uniprot id: Q9LMA7
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in roots, stems, flowers and siliques.

3702:AT3G18190
gene id: 3702:AT3G18190
uniprot id: A0A178V732
uniprot id: Q9LV21
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TCP-1 chaperonin family.
messages: Cytoplasm
messages: Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter.
messages: Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.

3702:AT2G27000
gene id: 3702:AT2G27000
uniprot id: A0A178W1J9
uniprot id: Q9ZVD7
names: Caution
names: Similarity
messages: Belongs to the cytochrome P450 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G08670
gene id: 3702:AT5G08670
uniprot id: P83483
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c (By similarity).
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT1G15580
gene id: 3702:AT1G15580
uniprot id: A0A384L3K6
uniprot id: D3K0C2
uniprot id: P33078
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Highly expressed in stems and flowers.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT1G48020
gene id: 3702:AT1G48020
uniprot id: Q9LNF2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Highest expression in flowers (PubMed:14675772, PubMed:14741367, PubMed:17971035). Expressed exclusively at the pollen tube tip (PubMed:14675772, PubMed:17971035).
messages: Inhibits pectin methylesterase (PME) from flowers and siliques (PubMed:14675772). Inhibits PME from leaves (PubMed:14741367).
messages: Monomer and homodimer. Interacts in vitro with PPME1.
messages: The N-terminal alpha-hairpin extension is required for pectinmethylesterase inhibitor activity.
messages: apoplast

3702:AT1G66600
gene id: 3702:AT1G66600
uniprot id: A0A384L7K9
uniprot id: C0SV19
uniprot id: Q9C6H5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group III family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT5G13850
gene id: 3702:AT5G13850
uniprot id: A0A654G0U4
uniprot id: Q6ICZ8
names: Function
names: Similarity
messages: Belongs to the NAC-alpha family.
messages: May promote appropriate targeting of ribosome-nascent polypeptide complexes.

3702:AT1G34130
gene id: 3702:AT1G34130
uniprot id: Q9FX21
uniprot id: W8PVA0
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the STT3 family.
messages: Catalytic subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity. This subunit contains the active site and the acceptor peptide and donor lipid-linked oligosaccharide (LLO) binding pockets.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Despite low primary sequence conservation between eukaryotic catalytic subunits and bacterial and archaeal single subunit OSTs (ssOST), structural comparison revealed several common motifs at spatially equivalent positions, like the DXD motif 1 on the external loop 1 and the DXD motif 2 on the external loop 2 involved in binding of the metal ion cofactor and the carboxamide group of the acceptor asparagine, the conserved Glu residue of the TIXE/SVSE motif on the external loop 5 involved in catalysis, as well as the WWDYG and the DK/MI motifs in the globular domain that define the binding pocket for the +2 Ser/Thr of the acceptor sequon. In bacterial ssOSTs, an Arg residue was found to interact with a negatively charged side chain at the -2 position of the sequon. This Arg is conserved in bacterial enzymes and correlates with an extended sequon requirement (Asp-X-Asn-X-Ser/Thr) for bacterial N-glycosylation.
messages: Endoplasmic reticulum membrane
messages: Expressed preferentially in the root but also in the shoot.
messages: Membrane
messages: No visible phenotype.

3702:AT1G52360
gene id: 3702:AT1G52360
uniprot id: A0A1P8AV73
uniprot id: F4ICX0
uniprot id: Q9C827
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat COPB2 family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3702:AT4G12100
gene id: 3702:AT4G12100
uniprot id: Q9SZ75
names: Similarity
messages: Belongs to the cullin family.

3702:AT5G04500
gene id: 3702:AT5G04500
uniprot id: Q84WB7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 64 family.
messages: Glycosyltransferase that mediates the glycosylation of glycosylinositol phosphorylceramides (GIPCs), the major sphingolipids in the plasma membrane; acts as a HexN(Ac)-specific GIPC sugar transferase and accepts glucosamine (GlcN) and N-acetylglucosamine (GlcNAc) as the sugar unit (PubMed:29760197). Responsible for the glycosylation of a subgroup of GIPCs found in seeds and pollen that contain GlcNAc and GlcN (GlcN(Ac)) (PubMed:29760197). Maybe involved in the maintenance of cell-cell adhesion (PubMed:29760197).
messages: Highly expressed in dry seed but drastically down-regulated after seed imbibition.
messages: Loss of the GlcN(Ac) glycosylinositol phosphorylceramides (GIPCs) leading to a reduced sensitivity to abiotic stress (e.g. abscisic acid and salt) on seed germination. Reduced HexNAc-GIPC content. Slightly larger seeds with more seed storage lipids and proteins and larger seed coat cells.
messages: Membrane
messages: Specifically and highly expressed in developing embryos and mature seeds. Also detected at low levels in stigma and pollen.

3702:AT5G39550
gene id: 3702:AT5G39550
uniprot id: A0A654G6G1
uniprot id: Q9FKA7
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Decreased DNA methylation primarily at CpG sites in genic regions, as well as repeated sequences in heterochromatic regions. Released transcriptional silencing at heterochromatin regions. Ectopic CpHpH methylation in the 5S rRNA genes against a background of CpG hypomethylation.
messages: E3 ubiquitin-protein ligase. Participates in CpG methylation-dependent transcriptional regulation and epigenetic transcriptional silencing. Mediates ubiquitination with the E2 ubiquitin-conjugating enzymes UBC11, UBC8 and UBC8 homologs (e.g. UBC10, UBC11, UBC28 and UBC29) but not with UBC27, UBC30, UBC32, UBC34 and UBC36. Promotes methylation-mediated gene silencing leading, for example, to early flowering. Can bind to CpG, CpNpG, and CpNpN DNA motifs, with a strong preference for methylated forms, and with highest affinity for CpG substrate.
messages: Expressed in inflorescences and leaves.
messages: Multi domain E3 ubiquitin ligase that also plays a role in DNA methylation and histone modifications.
messages: Nucleus
messages: The RING fingers are required for ubiquitin ligase activity.
messages: The YDG domain mediates the interaction with histone H3.

3702:AT1G35180
gene id: 3702:AT1G35180
uniprot id: Q6IDJ6
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G48400
gene id: 3702:AT5G48400
uniprot id: Q9LV72
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots and siliques.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May be due to an intron retention.
messages: May form heteromers.
messages: Membrane

3702:AT1G18670
gene id: 3702:AT1G18670
uniprot id: F4ICB6
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Impaired in beta-aminobutyric acid (BABA)-induced sterility. Altered BABA-induced resistance (BABA-IR) against bacteria (e.g. P.syringae) and oomycetes (e.g. H.parasitica) associated with reduction in priming for salicylate (SA)-dependent defense responses (e.g. trailing necrosis and pathogenesis-related PR-1 gene expression) (PubMed:15722464, PubMed:22209872). Reduced primed to be primed phenotype in transgenerationally primed plants exposed to a second BABA-priming (PubMed:22209872).
messages: Required for beta-aminobutyric acid (BABA)-induced resistance (BABA-IR) against bacteria (e.g. P.syringae) and oomycetes (e.g. H.parasitica) via priming for salicylate (SA)-dependent defense responses such as pathogenesis-related PR-1 gene expression and trailing necrosis. Involved in BABA-mediated sterility (PubMed:15722464, PubMed:22209872). Necessary for the inheritance of BABA-priming to next generation, especially for the primed to be primed phenotype which consists in an enhanced second BABA-priming in transgenerationally primed plants (PubMed:22209872).

3702:AT5G61890
gene id: 3702:AT5G61890
uniprot id: A0A178UJI0
uniprot id: Q9FH54
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Expressed during the S phase of the cell cycle.
messages: Interacts with AHL27 and AHL29.
messages: Nucleus
messages: Strongly expressed in proliferating cells. Detected in root tips, stipules, shoot apex, floral tissues, young siliques and abscission zones.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional regulator of cell proliferation and axillary bud outgrowth. Involved in maintaining the structure of the shoot apical meristem as well as plastochron and phyllotaxy. Activates several genes involved in cell cycle regulation and dormancy breaking, including CYCD3-3, DPA, and BARD1. Strongly down-regulates DRM1, DRMH1, MARD1 and several genes encoding different types of cell wall-remodeling proteins.
messages: Transiently up-regulated 6 to 15 hours after decapitation.

3702:AT4G30410
gene id: 3702:AT4G30410
uniprot id: A0A178V334
uniprot id: Q9M0B9
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bHLH protein family.
messages: Functions redundandly with IBH1/BHLH158 in a regulation node known as the incoherent feed-forward loop (FFL). Acts as transcriptional repressor that negatively regulates cell and organ elongation in response to gibberellin (GA) and brassinosteroid (BR) signaling.
messages: No visible phenotype.
messages: Nucleus
messages: Plants over-expressing IBL1 are dwarf with round-shaped, dark-green leaves and short petioles.

3702:AT5G60550
gene id: 3702:AT5G60550
uniprot id: A0A178UN27
uniprot id: Q5HZ38
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated when autophosphorylated at Thr-153 and inactivated when phosphorylated at Ser-260 by SnRK1.1/KIN10.
messages: Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively. Required for the regulation by SnRK1 kinases of the transcription of a large set of genes, the modification the activity of metabolic enzymes, and the control of various nutrient-responsive cellular developmental processes.
messages: Associates with the SNF1-related protein kinase (SnRK) complex (By similarity). Interacts with AL1, a geminivirus (TGMV) protein essential for viral replication.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By geminivirus (CaLCuV or BCTV) infection (at the protein level).
messages: Expressed in shoot apical meristem, leaf primordium and emerging petiole (at protein level).
messages: Functionally able to complement the yeast elm1 sak1 tos3 triple mutant.
messages: Highly expressed in young leaf and floral tissues but not expressed in mature tissues (at protein level).

3702:AT1G50490
gene id: 3702:AT1G50490
uniprot id: A0A5S9WNP4
uniprot id: Q8L7T3
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: By the herbicide isoxaben and by biotic stresses.
messages: Expressed during the G2-M phases of the cell cycle.
messages: Expressed in all tissues with cell division activities and in mature leaves.

3702:AT2G36990
gene id: 3702:AT2G36990
uniprot id: Q9LD95
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sigma-70 factor family.
messages: Chlorophyll-defective seedlings with reduced levels of chloroplast-encoded transcripts (e.g. atpB, atpE and rbcL). Delayed light-dependent chloroplast development. Constitutive acclimation to light stress. Suppressor of FLU disruption phenotype; seedlings missing both FLU and SIGF do not bleach when grown under non-permissive dark/light conditions.
messages: Expressed in seedling, accumulating progressively. Present in leaves but not in roots.
messages: Induced by red light. Slightly induced by blue light.
messages: Interacts (via N-terminus) with DG1 (via C-terminus).
messages: Phosphorylated to acquire sigma activity; site-specific phosphorylation regulates promoter affinity. Phosphorylation at Ser-174 by chloroplastic CK2 requires prior phosphorylation at Ser-177. Phosphorylation at either Ser-94, Ser-95 or Ser-174 is required for sigma activation.
messages: Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. Regulates transcription in chloroplast in a DG1-dependent manner. Involved in light-dependent chloroplast development. Required during early plant development and primary leaf formation.
messages: chloroplast

3702:AT3G09350
gene id: 3702:AT3G09350
uniprot id: A0A384KB34
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G62640
gene id: 3702:AT5G62640
uniprot id: Q9LV14
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Early flowering in both long and short days associated with reduced levels of FLC.
messages: In seedlings, mostly expressed in the shoot apical meristem (SAM) and root tip.
messages: Involved in the regulation of flowering time in both long and short days.
messages: Nucleus

3702:AT1G21210
gene id: 3702:AT1G21210
uniprot id: Q9LMN6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.
messages: Strictly expressed in siliques.

3702:AT2G36960
gene id: 3702:AT2G36960
uniprot id: Q8LJT8
names: Domain
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in flowers, roots and leaves.
messages: Interacts only with active kinase forms of TOUSLED. Interacts with SNL1.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Phosphorylated in vitro by TOUSLED.
messages: The Myb domain is not required for TOUSLED binding.

3702:AT4G14140
gene id: 3702:AT4G14140
uniprot id: O23273
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
messages: Expressed at low levels in vegetative and floral organs.
messages: Maintains chromatin CpG methylation that plays a role in genomic imprinting, regulation of embryogenesis and seed viability. Required for proper patterns of CG DNA methylation in dividing cells (By similarity).
messages: Nucleus

3702:AT3G12080
gene id: 3702:AT3G12080
uniprot id: A0A384LJ95
uniprot id: B5X565
uniprot id: F4J8M2
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.

3702:AT4G37380
gene id: 3702:AT4G37380
uniprot id: Q9SZT8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Binds 2 zinc ions per subunit.
messages: Plays a major role in single RNA editing events in chloroplasts. Acts as a site-recognition transacting factor involved in the edition of the site 5 of ndhB1 and ndhB2 (ndhB1-5 and ndhB2-5 sites corresponding to cytidine-830), which are plastid-encoded subunits of the NADH-plastoquinone oxidoreductase. May provide the catalytic activity for editing site conversion.
messages: chloroplast

3702:AT4G33260
gene id: 3702:AT4G33260
uniprot id: Q9S7I8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat CDC20/Fizzy family.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
messages: Delay in plant development due to reduced cell number and male sterility.
messages: Expressed in meristems and organ primordia. Present in flowers, leaves, stems and roots.
messages: Expression starts to rise in the S-phase and peaks in the M-phase with a non-negligible basic expression level also in the other cell cycle phases.
messages: Nucleus
messages: The APC/C is composed of at least 11 subunits that stay tightly associated throughout the cell cycle (By similarity). Interacts with APC10, FZR1, FZR2, FZR3. Part of the mitotic checkpoint complex (MCC); interacts with MAD2, BUB3.1, BUBR1 and BUB1. Binds to cyclins CYCA1-2, CYCB2-1 and CYCB2-2.

3702:AT1G74850
gene id: 3702:AT1G74850
uniprot id: Q9S7Q2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PPR family. P subfamily.
messages: Involved in plastid gene expression.
messages: Lethal without exogenous carbon sources. Decrease of total chlorophyll content as well as a decrease in the chlorophyll a:b ratio. Unequally expanded grana thylakoids. Altered expression profiles of plastid genes.
messages: Mostly expressed in leaves, stems and flowers, but barely in roots.
messages: chloroplast

3702:AT2G27940
gene id: 3702:AT2G27940
uniprot id: A0A178VQG7
uniprot id: Q9SJJ7
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G64920
gene id: 3702:AT1G64920
uniprot id: Q9XIQ4
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT2G21030
gene id: 3702:AT2G21030
uniprot id: F4IFN0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BRX family.
messages: Nucleus

3702:AT2G17420
gene id: 3702:AT2G17420
uniprot id: A0A1P8AZS7
uniprot id: Q39242
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Mitochondrion matrix
messages: Possesses thioredoxin-disulfide reductase activity towards thioredoxins O1, O2 and F3.
messages: The active site is a redox-active disulfide bond.

3702:AT3G20060
gene id: 3702:AT3G20060
uniprot id: A0A178V7W3
uniprot id: Q9LJZ5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (PubMed:12427990). Part of the anaphase-promoting complex (APC) (PubMed:12427990). May have a key function during cell cycle and be involved in cyclin B1 degradation (PubMed:12427990). Triggers OR ubiquitination that mediates its subsequent nuclear localization (PubMed:34405771). Involved in the repression of early light-induced proteins (ELIPs, e.g. ELIP1 and ELIP2) expression, probably via OR nuclear relocalization (PubMed:34405771).
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Cytoplasm
messages: Expressed during the G1-S phases of the cell cycle (PubMed:15970679). Constant levels during deetiolation (PubMed:34405771).
messages: Expressed in all tissues with cell division activities and in mature leaves.
messages: Increased expression levels of ELIP1 and ELIP2, especially upon illumination.
messages: Interacts with OR (PubMed:34405771). Binds to LOT1 (PubMed:31102784).
messages: Nucleus
messages: Seems not induced by heat shock, dark to light transition, proteasome inhibitor MG132 or geldanamycin.

3702:AT3G17180
gene id: 3702:AT3G17180
uniprot id: A0A1I9LNP7
uniprot id: A0A654F919
uniprot id: Q9LSM9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in senescent leaves and flowers.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT1G10310
gene id: 3702:AT1G10310
uniprot id: A0A178WMY3
uniprot id: Q9SY73
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Cytoplasm
messages: Homodimer.
messages: Mostly expressed in seeds, and, to a lower extent, in roots, leaves, flowers and siliques.
messages: NADPH-dependent pterin aldehyde reductase involved in pterin aldehyde salvage during folate turnover. Catalyzes the reduction of diverse aromatic and aliphatic aldehydes (e.g. acetaldehyde, n-propanal, 1-naphthaldehyde, benzaldehyde, cinnamaldehyde, n-butanal, n-hexanal, n-pentanal, 2-naphthaldehyde, n-octanal, n-nonanal and n-heptanal), in addition to the conversion of pterin-6-aldehyde (PtCHO) to 6-hydroxymethylpterin (PtCH(2)OH), and the conversion of dihydropterin-6-aldehyde (H(2)PtCHO) to 6-hydroxymethyldihydropterin (H(2)PtCH(2)OH) (PubMed:17550420). Cannot reduce the pterin ring (PubMed:17220358).
messages: Slight reduction in seed pterin aldehyde reductase activity, especially at low temperature.

3702:AT3G10570
gene id: 3702:AT3G10570
uniprot id: A0A384LHU4
uniprot id: Q9SQY7
names: Caution
names: Similarity
messages: Belongs to the cytochrome P450 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G65060
gene id: 3702:AT1G65060
uniprot id: Q9S777
names: Domain
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Both substrate-binding domains (SBD1 and SBD2) are involved in the substrate recognition, and are sufficient to confer the substrate specificity.
messages: By UV irradiation.
messages: Preferentially expressed in leaves, flowers and siliques.
messages: Produces CoA thioesters of a variety of hydroxy- and methoxy-substituted cinnamic acids, which are used to synthesize several phenylpropanoid-derived compounds, including anthocyanins, flavonoids, isoflavonoids, coumarins, lignin, suberin and wall-bound phenolics (PubMed:10417722). Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioesters (By similarity).

3702:AT3G12550
gene id: 3702:AT3G12550
uniprot id: Q9LHB1
names: Function
messages: Acts in association with FDM4 and FDM5 for RNA-directed DNA methylation (RdDM).

3702:AT5G49340
gene id: 3702:AT5G49340
uniprot id: Q9FJ06
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT3G16320
gene id: 3702:AT3G16320
uniprot id: Q06AN9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the APC3/CDC27 family.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication. Functionally redundant with CDC27B in the control of gametophyte development.
messages: No visible phenotype. Cdc27a and cdc27b double mutant is gametophytic lethal (PubMed:17944809).
messages: Nucleus
messages: The APC/C is composed of at least 10 subunits. Interacts with APC2 and APC10.

3702:AT1G78100
gene id: 3702:AT1G78100
uniprot id: Q9C9S2
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Involved in the control of basipetal and acropetal auxin transport by promoting the distribution and expression of the auxin transporter PIN2 (PubMed:21653785). Promotes cytokinin-mediated cell expansion in the root elongation and differentiation zone, without affecting root cell division (PubMed:21653785).
messages: Induced by auxin.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1, SKP1B/ASK2, ASK11 and ASK13 (PubMed:12169662).
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT4G00260
gene id: 3702:AT4G00260
uniprot id: O23076
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G24310
gene id: 3702:AT5G24310
uniprot id: A0A1P8BBP1
uniprot id: A0A1P8BBP2
uniprot id: A0A654G3W9
uniprot id: F4KFT1
uniprot id: Q0WQ89
uniprot id: Q6NMC6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABI family.
messages: Binds SCAR.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity).
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: cytoskeleton

3702:AT5G47880
gene id: 3702:AT5G47880
uniprot id: A0A178UFY7
uniprot id: Q39097
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic release factor 1 family.
messages: Cytoplasm
messages: Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (PubMed:15474304). Modulates plant growth and development (PubMed:16113224).
messages: Heterodimer of two subunits, one of which binds GTP.

3702:AT4G16566
gene id: 3702:AT4G16566
uniprot id: Q84VV6
names: Activity Regulation
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Peroxisome
messages: Possesses adenylylsulfatase activity in vitro, releasing AMP and sulfate from adenylyl sulfate. Possesses also adenosine 5'-phosphosulfate (APS) phosphorylase activity in vitro. Catalyzes the phosphorolysis of APS, leading to ADP and sulfate.
messages: The adenosine 5'-phosphosulfate phosphorylase activity is enhanced at low pH.

3702:AT5G67520
gene id: 3702:AT5G67520
uniprot id: A0A1P8BEE5
uniprot id: A0A5S9YID9
uniprot id: Q84JF0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the APS kinase family.
messages: Catalyzes the phosphorylation of adenosine 5'-phosphosulfate to 3'-phosphoadenylyl sulfate, which is the activated sulfate form for sulfation reactions. Essential for plant reproduction and viability.
messages: Catalyzes the synthesis of activated sulfate.
messages: Expressed in root vasculature, root tips, leaf epidermal and guard cells, pollen grains and radicle of immature seeds.
messages: Homodimer; disulfide-linked.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT1G09350
gene id: 3702:AT1G09350
uniprot id: A0A1P8AN71
uniprot id: A0A654E850
uniprot id: O80518
uniprot id: W8PVD7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Belongs to the glycosyltransferase 8 family. Galactosyltransferase subfamily.
messages: Cytoplasm
messages: Galactinol synthase involved in the biosynthesis of raffinose family oligosaccharides (RFOs) that function as osmoprotectants. May promote plant stress tolerance (By similarity).
messages: Induced by cold in a DREB1A-dependent manner; this induction is accompanied by a reduction in trimethylation of 'Lys-27' of histone H3 (H3K27me3) in GOLS3 promoter (PubMed:19500304). Induced by methylviologen (MV), a superoxide radical generating drug.

3702:AT1G68200
gene id: 3702:AT1G68200
uniprot id: Q9C9F5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cytoplasm
messages: Functions probably as a transcriptional factor that activates genes involved in secondary cell wall biosynthesis (PubMed:25228083, PubMed:25732536). Functions redudantly with C3H14 to regulate secondary cell wall formation (PubMed:25732536). C3H14 and C3H15 have overlapping roles in the regulation of secondary cell wall formation and anther development (PubMed:25732536). C3H14 may contribute more to secondary cell wall thickening while C3H15 could be more important in anther development (PubMed:25732536). May regulate at both the transcriptional and post-transcriptional levels the expression of many genes involved in various biological processes, particularly those associated with cell wall metabolism and pollen development (PubMed:25732536). Involved in the regulation of callose metabolism in male meiocytes, in integrity of newly formed microspores, and promotes male fertility (PubMed:24567187). May be involved in the regulation of the callose synthesis genes CALS5 and CALS12, the potential degradation of callose walls-related genes A6 and MYB80, as well as other putative beta-1,3-glucanase genes (PubMed:24567187). Negatively regulates cell elongation by inhibiting brassinosteroid (BR) signaling (PubMed:35139225). Functions downstream of the BRI1 receptor as a negative regulator in the BR pathway (PubMed:35139225).
messages: Highly expressed in secondary cell wall-forming tissues and the xylem cells of roots (PubMed:25228083). Expressed predominantly in inflorescence stems, flowers and siliques (PubMed:25732536). Highly expressed in the basal portion of stems, where cells are undergoing secondary cell wall thickening (PubMed:25732536). Highly expressed in meiocytes and tapetum from anthers (PubMed:24567187).
messages: May be due to a competing acceptor splice site.
messages: No visible phenotype under normal growth conditions (PubMed:25228083). The double mutants c3h14 and c3h15 have reductions in stem secondary cell wall thickening and defects in anther development (PubMed:25732536). Callose deposition defects in microspores, and pollen exine formation severely affected, leading to male sterility (PubMed:24567187).
messages: Nucleus
messages: Phosphorylated at Ser-111 by ASK7/BIN2 in the cytoplasm in the absence of brassinosteroids (BRs).
messages: Plants overexpressing C3H15 exhibit small and slightly curled leaves, and retarded stem elongations due to cell elongation defect and ectopic secondary cell wall formation (PubMed:25228083). Overexpression of C3H15 results in secondary cell wall thickening in fibers and vessels (PubMed:25732536).

3702:AT5G63250
gene id: 3702:AT5G63250
uniprot id: A0A178UQJ1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G16120
gene id: 3702:AT2G16120
uniprot id: Q9XIH7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Plasma membrane sugar-proton symporter.

3702:AT4G02690
gene id: 3702:AT4G02690
uniprot id: A0A1P8B7U7
uniprot id: A0A5S9XPA3
uniprot id: Q9ZQX7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

3702:AT4G24060
gene id: 3702:AT4G24060
uniprot id: A0A384LC04
uniprot id: B9DGH2
uniprot id: Q8LAP8
names: Developmental Stage
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in the stele.
messages: Expressed at preprocambial stages first in wide domains, and later confined to sites of vein development.
messages: May be due to an intron retention.
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

3702:AT1G10120
gene id: 3702:AT1G10120
uniprot id: A0A654E9E7
uniprot id: Q6NKN9
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer (Probable). Interacts with IBH1. Binds reversibly to CRY2 after blue light illumination (PubMed:24130508).
messages: Nucleus
messages: Plants over-expressing BHLH74 show increased hypocotyl and cotyledon lengths.
messages: Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508).

3702:AT1G75020
gene id: 3702:AT1G75020
uniprot id: A0A654EP47
uniprot id: Q8L4Y2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
messages: May convert lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position (By similarity). Has no activity when expressed in bacteria or yeast.
messages: Membrane
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: Widely expressed at low level.

3702:AT5G01850
gene id: 3702:AT5G01850
uniprot id: A0A1P8BGL4
uniprot id: Q8L6Y9
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G45430
gene id: 3702:AT5G45430
uniprot id: F4KD80
uniprot id: Q8H0X4
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT1G58055
gene id: 3702:AT1G58055
uniprot id: Q2V4G3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G18940
gene id: 3702:AT2G18940
uniprot id: O64624
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: chloroplast

3702:AT2G24625
gene id: 3702:AT2G24625
uniprot id: Q2V460
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G17620
gene id: 3702:AT4G17620
uniprot id: A0A384KY78
uniprot id: F4JP90
uniprot id: F4JP92
uniprot id: Q0WV80
uniprot id: Q8RY73
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DXO/Dom3Z family.
messages: Binds 2 magnesium ions.
messages: Cytoplasm
messages: Decapping enzyme for NAD-capped RNAs: specifically hydrolyzes the nicotinamide adenine dinucleotide (NAD) cap from a subset of RNAs by removing the entire NAD moiety from the 5'-end of an NAD-capped RNA (PubMed:30949699). The NAD-cap is present at the 5'-end of some RNAs and promotes mRNA decay (By similarity). Its precise role is unclear: may be involved in the connection between RNA turnover and retrograde chloroplast-to-nucleus signaling independently of its deNADding activity (PubMed:30949699).
messages: Decapping enzyme for NAD-capped RNAs: specifically hydrolyzes the nicotinamide adenine dinucleotide (NAD) cap from a subset of RNAs by removing the entire NAD moiety from the 5'-end of an NAD-capped RNA.
messages: Growth and pigmentation defects associated with global transcriptomic changes and accumulation of RNA quality control siRNAs.
messages: In contrast to other members of the family, shows reduced activity toward of m7G capped or incompletely capped RNAs, probably caused by the presence of an Asn residue in position 298 instead of a Gly (PubMed:30949699). The presence of an Asn-298 does not affect the decapping activity on NAD-cap RNAs (PubMed:30949699).
messages: Nucleus

3702:AT2G05990
gene id: 3702:AT2G05990
uniprot id: A0A654ETR6
uniprot id: Q9SLA8
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.
messages: Catalyzes the NAD-dependent reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP). Catalyzes the last reduction step in the de novo synthesis cycle of fatty acids. Involved in the elongation cycle of fatty acids which are used in lipid metabolism. Required for normal plant growth.
messages: Expressed in flowers and siliques and at lower levels in roots and leaves (at protein level).
messages: Homotetramer.
messages: Inhibited by the phytotoxin cyperin and the synthetic antimicrobial compound triclosan.
messages: Premature cell death in several organs, chlorotic and curly leaves, semidwarfism, distorted siliques, premature senescence of primary inflorescences, reduced fertility and decrease in total lipid content.
messages: chloroplast

3702:AT5G60780
gene id: 3702:AT5G60780
uniprot id: A0A178UID3
uniprot id: Q9FJH7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.
messages: Expressed in roots and shoots.
messages: Interacts with NRT3.1.
messages: Involved in high-affinity nitrate transport. Acts as a dual component transporter with NTR3.1 (By similarity).
messages: Membrane
messages: Not induced by nitrate.

3702:AT5G04430
gene id: 3702:AT5G04430
uniprot id: Q9LZ82
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cytoplasm
messages: Expressed in leaves, stems and siliques.
messages: Higher accumulation of ToMV in infected leaves.
messages: Negative regulator of tomato mosaic virus (ToMV) multiplication, but has no effect on the multiplication of cucumber mosaic virus (CMV). Limits the spreading of the virus (PubMed:18762309). Isoform BTR1S: binds preferentially and directly to the 5'terminal region of ToMV genomic RNA, and affects the efficiency of translation rather than mRNA stability (PubMed:18762309).
messages: Not induced by ToMV infection.

3702:AT1G11730
gene id: 3702:AT1G11730
uniprot id: Q9SAA4
uniprot id: W8Q7D4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT3G52850
gene id: 3702:AT3G52850
uniprot id: A0A654FGW5
uniprot id: P93026
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the VSR (BP-80) family.
messages: Golgi apparatus membrane
messages: Interacts with the N-terminal propeptide of ALEU and the C-terminal part of the 12S globulin CRA1 in a calcium-dependent manner. Binds to EPSIN1.
messages: Membrane
messages: Mostly expressed in roots and dividing cells (at protein level). Also expressed in seeds, seedlings, leaves, stems, flowers, siliques and pollen.
messages: Prevacuolar compartment membrane
messages: Slightly induced by water deficit.
messages: The tyrosine-based internalization signal may be involved in trafficking at the trans Golgi network (TGN).
messages: Vacuolar-sorting receptor (VSR) involved in clathrin-coated vesicles sorting from Golgi apparatus to vacuoles. Required for the sorting of 12S globulin, 2S albumin and maybe other seed storage proteins to protein storage vacuoles (PSVs) in seeds. May also be implicated in targeting N-terminal propeptide containing proteins to lytic vacuoles.
messages: clathrin-coated vesicle membrane

3702:AT3G54470
gene id: 3702:AT3G54470
uniprot id: A0A5S9XKR6
uniprot id: Q42586
names: Similarity
messages: In the C-terminal section; belongs to the OMP decarboxylase family.
messages: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.

3702:AT3G45040
gene id: 3702:AT3G45040
uniprot id: A0A178VLG6
uniprot id: A0A1I9LMJ1
uniprot id: A0A1I9LMJ2
uniprot id: F4J4C8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polyprenol kinase family.
messages: Endoplasmic reticulum membrane
messages: Essential for pollen development. Involved in protein N-glycosylation in the endoplasmic reticulum (ER), especially in the female gametophyte. Mediates pollen tube (PT) reception in synergids through protein glycosylation.
messages: Pollen tube (PT) overgrowth inside the female gametophyte (FG) without PT rupture. Degenerated pollen grains before maturation, during the early tricellular stage.

3702:AT3G52590
gene id: 3702:AT3G52590
uniprot id: A0A178W3S3
uniprot id: B9DHA6
uniprot id: Q42202
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Component of the 60S subunit of the ribosome.
messages: Cytoplasm
messages: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eL40 family.
messages: In the N-terminal section; belongs to the ubiquitin family.
messages: Nucleus
messages: Part of the 60S ribosomal subunit.
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there are one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either eL40 or eS31) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT1G08830
gene id: 3702:AT1G08830
uniprot id: A0A178WMU1
uniprot id: P24704
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Cu-Zn superoxide dismutase family.
messages: Binds 1 copper ion per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
messages: Expressed in leaves (at protein level). The spatial localization is regulated by miR398-mediated silencing. Mostly present in flowers, old rosette leaves and inflorescence, and, to a lower extent, in cauline leaves, stems and roots.
messages: Homodimer. Interacts with DJ1A and CCS.
messages: Nucleus
messages: Upon photosynthetically active radiation (PAR) (e.g. light fluence) increase and UV-B treatment. Accumulates in response to ozone fumigation. Induced in response to oxidative stress, via a reduction of miR398-mediated silencing. Repressed by sucrose in a miR398-mediated silencing-dependent manner. Induced by salt stress.
messages: cytosol

3702:AT3G52340
gene id: 3702:AT3G52340
uniprot id: A0A178VKB2
uniprot id: A0A1I9LQG1
uniprot id: A0A1I9LQG4
uniprot id: Q93XN8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the sucrose phosphatase family.
messages: Catalyzes the final step of sucrose synthesis.
messages: Homodimer.

3702:AT1G26850
gene id: 3702:AT1G26850
uniprot id: A0A178W7C5
uniprot id: B9DFI7
uniprot id: F4HPE1
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Co-expressed with the galacturonosyltransferases GAUT1 and GAUT9.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT4G22520
gene id: 3702:AT4G22520
uniprot id: A0A654FRS4
uniprot id: Q9SUW7
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT1G72220
gene id: 3702:AT1G72220
uniprot id: A0A178WDF0
uniprot id: Q8LFY8
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G71820
gene id: 3702:AT1G71820
uniprot id: A0A5S9WRP0
uniprot id: F4IA34
uniprot id: Q94AI6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SEC6 family.
messages: Cell membrane
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall.
messages: Male gametophytic lethal due to defect in pollen germination and pollen tube growth.
messages: The exocyst complex is composed of SEC3, SEC5, SEC6, SEC8, SEC10, EXO70A1 and EXO84B. Interacts with EXO84B and KEU (via C-terminus). Binds to EXO70E2 (PubMed:24307681). Binds directly to B1L (PubMed:35249253).
messages: cell wall
messages: cytosol
messages: extracellular exosome
messages: phragmoplast

3702:AT3G15351
gene id: 3702:AT3G15351
uniprot id: A0A384KNW2
uniprot id: B9DG98
uniprot id: F4IYP9
uniprot id: Q9LJR1
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of the PAQosome complex which is responsible for the biogenesis of several protein complexes and which consists of R2TP complex members RUVBL1, RUVBL2, RPAP3 and PIH1D1, URI complex members PFDN2, PFDN6, PDRG1, UXT and URI1 as well as ASDURF, POLR2E and DNAAF10/WDR92.
messages: Cytoplasm
messages: May play a role in chaperone-mediated protein folding.

3702:AT5G25640
gene id: 3702:AT5G25640
uniprot id: A0A178U8L8
uniprot id: F4JY73
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane

3702:AT5G02500
gene id: 3702:AT5G02500
uniprot id: A0A178UL64
uniprot id: F4KCE5
uniprot id: P22953
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.
messages: Binds to the deubiquitinating enzyme AMSH3. Interacts with SGT1B (via SGS domain). Interacts with OEP61. Interacts with HSFA1A/HSF1. Interacts with BAG3, BAG4 and BAG5. Interacts with WPP1, WPP2 and WIT1. Component of a ternary complex composed of WPP1, HSP70-1 and WIT1. Binds to TIR.
messages: Down-regulated during seed maturation. Up-regulated during germination.
messages: Expressed at a substantial level during normal growth in root, stem, leaf and flower tissues, but not in siliques (PubMed:8049382). Expressed in cotyledons, leaves, stems, vascular bundles, roots, stigmas and anthers (PubMed:28004282).
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable). Probably involved in defense response. Chaperone involved in protein targeting to chloroplasts. May cooperate with SGT1 and HSP90 in R gene-mediated resistance towards the oomycete Hyaloperonospora parasitica (downy mildew). Plays a role with WPP-domain proteins in facilitating WIT1 nuclear envelope targeting (PubMed:12805626, PubMed:18065690, PubMed:19617588). Modulates stomatal aperture in response to various environmental conditions and physiological responses to the hormone abscisic acid (ABA) (PubMed:21586649).
messages: Induced by heat shock and cold (PubMed:11402207). Induced by dehydration stress and abscisic acid (ABA) (PubMed:8075396). Up-regulated by viral infection (PubMed:15805473).
messages: No visible phenotype under normal growth conditions (PubMed:21418353, PubMed:28004282, PubMed:26408532). The double mutants hsp70-1 and hsp70-4 exhibit accelerated bolting, flowering, and branching, small round shape and flat leaf blades, thin stems and short siliques (PubMed:28004282). The double mutants hsp70-1 and hsp70-4 exhibit reduced tolerance to abiotic stresses, such as heat, cold, salt and osmotic shock (PubMed:28004282).
messages: Nucleus
messages: Plants overexpressing HSP70-1 show disabled immune responses, enhanced tolerance to heat shock and altered plant growth and development (PubMed:12805626). Plants overexpressing HSP70-1 are hypersensitive to abscisic acid (ABA) in seed germination assays, and are compromised in the dark- and ABA-induced stomatal closure (PubMed:21586649).
messages: cytosol

3702:AT1G53490
gene id: 3702:AT1G53490
uniprot id: F4HRI2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Chromosome
messages: Expressed mostly in flower buds and roots.
messages: Normal vegetative growth but fertility defects leading to reduced seed number per silique, due to abortion of male and female gametophytes characterized by abnormal tetrahedral structure becoming either asymmetric tetrads or polyads containing more than four products, because of impaired class I crossover (CO) formation during meiosis.
messages: Nucleus
messages: Ubiquitin E3 ligase required for class I crossover (CO) formation during meiosis.

3702:AT5G53280
gene id: 3702:AT5G53280
uniprot id: Q9FK13
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the plastid division machinery (PubMed:16998069). Required to mediate the dissociation of ARC5/DRP5B from plastid outer envelope membranes (OEMs) at the midplastid constriction site in the cytoplasm, thus triggering ARC5/DRP5B ring turnover at the chloroplast division site (PubMed:16998069, PubMed:32005784). Binding to phosphatidylinositol 4-phosphate (PI4P) modulates negatively chloroplast division (PubMed:25736058).
messages: Expressed in young developing leaves, root tips, shoot apices, and flower buds (sepals, petals, stamens, and pistils), but not in developed tissues.
messages: Induced by gibberellic acid (GA).
messages: Interacts (via C-terminus) with CDP1/PARC6 (via C-terminus) (PubMed:26527658). Interacts with ARC5/DRP5B (PubMed:32005784).
messages: Reduced number of constricted and large chloroplasts due to a blocked plastid division (PubMed:16998069, PubMed:32005784). Accumulation of ARC5/DRP5B in the plastid outer envelope membranes (OEMs) at the midplastid constriction site in the cytoplasm (PubMed:32005784).
messages: chloroplast outer membrane

3702:AT5G38500
gene id: 3702:AT5G38500
uniprot id: Q9FFX1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G49780
gene id: 3702:AT3G49780
uniprot id: A0A178VNX7
uniprot id: Q9M2Y0
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phytosulfokine family.
messages: Expressed in roots, mature leaves, stems, flowers and siliques. Most abundant in vascular bundles.
messages: PSK-alpha is produced by endopeptidase digestion. PSK-beta is produced from PSK-alpha by exopeptidase digestion.
messages: PSK-beta is an enzymatic derivative of PSK-alpha.
messages: Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
messages: Secreted
messages: Sulfation is important for activity and for the binding to a putative membrane receptor.
messages: Up-regulated by wounding.

3702:AT5G61160
gene id: 3702:AT5G61160
uniprot id: Q9FNP9
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the plant acyltransferase family.
messages: Increased susceptibility to A.brassicicola infection.
messages: Involved in the biosynthesis of hydroxycinnamic acid amides, which play a role in defense against pathogens. Agmatine is the preferred acyl acceptor, lower activity is observed towards putrescine. The preferred acyl donor is p-coumaroyl-CoA, lower activity is seen towards feruloyl-CoA.

3702:AT2G19520
gene id: 3702:AT2G19520
uniprot id: A0A178VX04
uniprot id: O22607
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
messages: Binds zinc.
messages: Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of the flowering autonomous pathway which positively regulates flowering by promoting transcriptional repression of the flowering repressor FLC. May promote histone deacetylation at the FLC locus leading to the formation of repressive chromatin structures. Forms a histone deacetylase complex with HDA5, HDA6 and FLD that represses FLC gene expression to control flowering time (PubMed:25922987). Also negatively regulates cold-responsive genes. Acts together with PDP1 and MSI5 to regulate the function of the PRC2 complex on FLC (PubMed:29314758). Required for systemic acquired resistance (SAR) toward pathogenic bacteria (e.g. Pseudomonas syringae pv tomato DC3000 (avrPto)) (PubMed:32392578). Together with FLD and MSI4/FVE, contributes to dehydroabietinal-dependent (DA, a diterpenoid tricyclic diterpene) activation of flowering ans SAR (PubMed:32392578).
messages: Expressed in rosette leaves, cauline leaves, main stems and developing fruits. Expressed at higher levels in roots and flowers.
messages: Induced by dehydroabietinal-dependent (DA), a diterpenoid tricyclic diterpene that promotes flowering and systemic acquired resistance (SAR).
messages: Interacts with AHL16 and HOS1 (PubMed:22960247, PubMed:23394836). Interacts with LHP1, PDP1, PDP2 and PDP3 (PubMed:29314758). Component of the PRC2 (polycomb repressive complex 2) complex which regulates histone methylation on histone H3K27 (PubMed:29314758).
messages: Nucleus
messages: Reduced H3K27me3 level but increased levels of histone H3 acetylation and H3K4me3 on FLC in the fve msi5 double mutant (PubMed:29314758). Delayed flowering (PubMed:32392578). Impaired systemic acquired resistance (SAR) toward pathogenic bacteria (e.g. Pseudomonas syringae pv tomato DC3000 (avrPto)) (PubMed:32392578). Lost ability of dehydroabietinal-dependent (DA, a diterpenoid tricyclic diterpene) to trigger flowering and systemic acquired resistance (SAR) (PubMed:32392578).
messages: The DWD box is required for interaction with DDB1A.

3702:AT2G34450
gene id: 3702:AT2G34450
uniprot id: A0A654F9F6
uniprot id: O64702
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HMGB family.
messages: Nucleus

3702:AT2G22680
gene id: 3702:AT2G22680
uniprot id: Q9ZQ46
names: Function
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase involved in the regulation of root growth. Acts as positive regulator of root gravitropism. Possesses E3 protein ligase activity in vitro.
messages: Expressed in root tips and leaf primordia.

3702:AT3G12620
gene id: 3702:AT3G12620
uniprot id: A0A178VMK5
uniprot id: Q9LHJ9
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Cell membrane
messages: Interacts with BIK1.
messages: May dephosphorylate and repress plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), thus influencing negatively plant growth and fitness (By similarity). Involved in pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) signaling (PubMed:27494702). Negatively regulates immune responses by controlling the phosphorylation and activation status of BIK1, a central rate-limiting kinase in PTI signaling (PubMed:27494702). Impairs the phosphorylation of the NADPH oxidase RBOHD by BIK1 (PubMed:27494702).
messages: Phosphorylation at Ser-77 induces dissociation of PP2C38 from BIK1.

3702:AT5G19780
gene id: 3702:AT5G19780
uniprot id: A0A178UTQ9
uniprot id: B9DHQ0
uniprot id: Q56WH1
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: There are six genes coding for alpha-tubulin. The sequences coded by genes 3 and 5 are identical.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively.
messages: cytoskeleton

3702:AT3G44750
gene id: 3702:AT3G44750
uniprot id: A0A5S9XIC3
uniprot id: F4J378
uniprot id: Q9FVE6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone deacetylase HD2 family.
messages: Expressed in leaves, roots, stems, young plantlets, flowers and siliques. Highest levels in ovules, embryos, shoot apical meristems and first leaves. Also expressed in somatic embryos.
messages: Interacts with DNMT2 (PubMed:20331964). Interacts with DEK3 (PubMed:25387881).
messages: Loss-of-function mutant (antisense inhibition) induces increased methylation of histone H3 'Lys-4' and hypomethylation of DNA at rDNA repeats.
messages: Probably mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Required for histone H3 'Lys-9' deacetylation. Involved in rRNA gene silencing in nucleolar dominance. Seems to be implicated in the regulation of genes involved in seeds development.
messages: nucleolus

3702:AT2G19310
gene id: 3702:AT2G19310
uniprot id: A0A178VZ57
uniprot id: O64564
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Cytoplasm
messages: May form oligomeric structures.

3702:AT3G01920
gene id: 3702:AT3G01920
uniprot id: A0A1I9LM38
uniprot id: A0A654FDR8
uniprot id: Q9SGI3
names: Similarity
messages: Belongs to the SUA5 family.

3702:AT1G62060
gene id: 3702:AT1G62060
uniprot id: O04573
names: Similarity
messages: Belongs to the UPF0540 family.

3702:AT1G33170
gene id: 3702:AT1G33170
uniprot id: A0A178WLJ1
uniprot id: Q9C884
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G55620
gene id: 3702:AT3G55620
uniprot id: A0A178VEN3
uniprot id: Q9M060
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-6 family.
messages: Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
messages: Cytoplasm
messages: Expressed at very low levels only.
messages: Monomer. Associates with the 60S ribosomal subunit.
messages: nucleolus

3702:AT2G30470
gene id: 3702:AT2G30470
uniprot id: Q8W4L5
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in flowers and at lower levels in roots, stems and leaves.
messages: Interacts with SNL1.
messages: Nucleus
messages: Transcriptional repressor of gene expression involved in embryonic pathways, such as LEC1, ABI3, and FUS3. Repressor of the sugar-inducible genes involved in the seed maturation program in seedlings. Plays an essential role in regulating the transition from seed maturation to seedling growth. Functionally redundant with VAL2/HSL1.

3702:AT1G16340
gene id: 3702:AT1G16340
uniprot id: A0A178W4E1
uniprot id: F4I2W6
uniprot id: Q6NQL4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the KdsA family.
messages: Catalyzes the stereospecific condensation of D-arabinose 5-phosphate and phosphoenolpyruvate to form 3-deoxy-D-manno-octulosonate 8-phosphate (KDO-8-phosphate) and inorganic phosphate. Involved in the biosynthesis of 3-deoxy-D-manno-octulosonate (KDO) which is an indispensable component of rhamnogalacturonan II (RG-II), a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues and pollen tube growth and elongation.
messages: Cytoplasm
messages: Expressed in roots, apical meristem, emerging leaves, hydathodes of young leaves, styles of mature flowers and funicules of mature siliques.

3702:AT1G61105
gene id: 3702:AT1G61105
uniprot id: A0A178WLM6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G03680
gene id: 3702:AT1G03680
uniprot id: O48737
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. Plant M-type subfamily.
messages: Thiol-disulfide oxidoreductase involved in the redox regulation of enzymes of both reductive pentose phosphate pathway (Calvin-Benson cycle) and oxidative pentose phosphate pathway. Under reducing conditions, activates the glyceraldehyde-3-phosphate dehydrogenase and the phosphoribulokinase, and inhibits. the glucose-6-phosphate dehydrogenase. Activates NADP-malate dehydrogenase.
messages: chloroplast stroma

3702:AT4G25110
gene id: 3702:AT4G25110
uniprot id: Q7XJE5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
messages: Acts as a negative regulator of oxidative stress cell death and hypersensitive cell death response mediated by immune response. Acts via indirect or direct regulation of AMC1 at postranscriptional level.
messages: Belongs to the peptidase C14B family.
messages: May be due to a competing acceptor splice site.
messages: No visible phenotype under normal growth conditions, but enhancement of hypersensitive cell death response upon infection with avirulent pathogen.

3702:AT1G62680
gene id: 3702:AT1G62680
uniprot id: Q3ECK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G45330
gene id: 3702:AT3G45330
uniprot id: Q9M3E5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the fungus Alternaria brassicicola.
messages: Involved in resistance response to the pathogenic fungus Alternaria brassicicola.

3702:AT5G02860
gene id: 3702:AT5G02860
uniprot id: Q9LYZ9
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G22830
gene id: 3702:AT1G22830
uniprot id: Q4V389
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G15660
gene id: 3702:AT1G15660
uniprot id: Q66LG9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CENP-C/MIF2 family.
messages: Component of the CENPA-NAC (nucleosome-associated) complex, a complex that plays a central role in assembly of kinetochore proteins, mitotic progression and chromosome segregation.
messages: Nucleus
messages: Oligomer. Component of the CENPA-NAC complex.
messages: The MIF2 homology domain II targets centromeres and binds the alpha satellite DNA in vivo.
messages: centromere
messages: kinetochore

3702:AT5G38780
gene id: 3702:AT5G38780
uniprot id: Q9FKR0
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the methyltransferase superfamily. Type-7 methyltransferase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.

3702:AT4G15540
gene id: 3702:AT4G15540
uniprot id: A0A654FPN3
uniprot id: F4JK59
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT3G57010
gene id: 3702:AT3G57010
uniprot id: A0A178VJ69
uniprot id: Q9M1J7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the strictosidine synthase family.
messages: Vacuole

3702:AT3G05160
gene id: 3702:AT3G05160
uniprot id: A0A5S9XAC4
uniprot id: A8MQL4
uniprot id: Q93Z80
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT1G31920
gene id: 3702:AT1G31920
uniprot id: Q9C6T2
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT2G05335
gene id: 3702:AT2G05335
uniprot id: P82634
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G27850
gene id: 3702:AT5G27850
uniprot id: A0A178UKW4
uniprot id: A0A1P8BGQ0
uniprot id: Q940B0
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL18 family.

3702:AT5G54510
gene id: 3702:AT5G54510
uniprot id: A0A384LDF8
uniprot id: B5X4Z8
uniprot id: Q9LSQ4
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: By auxin. Not regulated by light.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin. Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val. Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys. Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA). The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates (PubMed:15659623). Involved in auxin signal transduction. Inhibits shoot and hypocotyl cell elongation, and lateral root cell differentiation in light (PubMed:11169197).
messages: Expressed in cotyledons, stipules, true leaves, hypocotyls, and all parts of the roots. Not detected in flowers.
messages: The gain-of-function mutant dfl1-D (T-DNA tagging) has a short hypocotyl under blue, red and far-red light, but not in darkness, shows an exaggerated dwarf phenotype in the adult plant caused by the inhibition of cell elongation in shoots, and inhibition of the lateral root growth without any reduction of primary root length.

3702:AT1G58807
gene id: 3702:AT1G58807
uniprot id: F4IBE4
uniprot id: P0DI16
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Potential disease resistance protein.

3702:AT4G23660
gene id: 3702:AT4G23660
uniprot id: F4JPA9
uniprot id: Q93YP7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Arrest of embryo development at an early stage of zygotic embryogenesis.
messages: Belongs to the UbiA prenyltransferase family.
messages: Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
messages: Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. Required for embryo development.
messages: Expressed in flowers.
messages: Mitochondrion inner membrane

3702:AT2G28030
gene id: 3702:AT2G28030
uniprot id: Q9ZUU5
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT5G51660
gene id: 3702:AT5G51660
uniprot id: Q9FGR0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CPSF1 family.
messages: CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction.
messages: Component of the CPSF complex, at least composed of CPSF160, CPSF100, CPSF73-I, CPSF73-II, CPSF30, FY and FIPS5. Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits FY, CPSF30, CPSF73-I, CPSF 73-II and CPSF100.
messages: Nucleus

3702:AT5G27370
gene id: 3702:AT5G27370
uniprot id: Q3E912
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant DMP1 protein family.
messages: Involved in membrane remodeling.
messages: Membrane
messages: Restricted to flowers.

3702:AT4G35500
gene id: 3702:AT4G35500
uniprot id: A0A178UU97
uniprot id: O81783
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT4G29735
gene id: 3702:AT4G29735
uniprot id: A0A178V421
uniprot id: F4JNQ9
uniprot id: Q8LCF2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OST5 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT4G40100
gene id: 3702:AT4G40100
uniprot id: Q9M063
names: Similarity
messages: Belongs to the GEM family.

3702:AT4G24250
gene id: 3702:AT4G24250
uniprot id: A0A1P8B5M1
uniprot id: A0A384KAF8
uniprot id: Q56XQ5
uniprot id: Q94KB2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT4G11190
gene id: 3702:AT4G11190
uniprot id: A0A178UY67
uniprot id: Q9T017
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Expressed in root vasculature and meristems, cotyledons, flowers, siliques, and leaf trichomes. Localized in the interfascicular/vascular cambia and developing xylem.
messages: Homodimer.
messages: In flowers, expressed in the vasculature of sepals, petals, stamen filaments, and the gynoecium stylar region. In siliques, observed in the stigmatic region and epidermal layers.
messages: apoplast

3702:AT1G72280
gene id: 3702:AT1G72280
uniprot id: A0A654ETF7
uniprot id: Q0WSW0
uniprot id: Q9C7S7
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EROs family.
messages: Endoplasmic reticulum membrane
messages: Essential oxidoreductase that oxidizes proteins in the endoplasmic reticulum to produce disulfide bonds. Acts by oxidizing directly PDI isomerase through a direct disulfide exchange. Does not act as a direct oxidant of folding substrate, but relies on PDI to transfer oxidizing equivalent. Does not oxidize all PDI related proteins, suggesting that it can discriminate between PDI and related proteins. Its reoxidation probably involves electron transfer to molecular oxygen via FAD. Acts independently of glutathione. May be responsible for a significant proportion of reactive oxygen species (ROS) in the cell, thereby being a source of oxidative stress (By similarity).
messages: May function both as a monomer and a homodimer.
messages: N-glycosylated.

3702:AT1G42980
gene id: 3702:AT1G42980
uniprot id: Q9C7S1
names: Similarity
messages: Belongs to the formin-like family. Class-II subfamily.

3702:AT5G36700
gene id: 3702:AT5G36700
uniprot id: A0A178UPN0
uniprot id: P0DKC3
uniprot id: P0DKC4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
messages: Chlorotic primary leaves soon after germination and plants not viable when grown under ambient air, but normal growth under CO(2)-enriched air.
messages: Divalent metal ions. Mg(2+) is the most effective.
messages: Photorespiratory enzyme that dephosphorylates the 2-phosphoglycolate produced by the RuBisCO oxygenation reaction.
messages: chloroplast

3702:AT3G62690
gene id: 3702:AT3G62690
uniprot id: Q9LZJ6
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G03790
gene id: 3702:AT1G03790
uniprot id: Q9ZWA1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Increased levels of JMJ20 and JMJ22 in far-red (FR) conditions.
messages: Interacts with MARD1/FLZ9 and RD21A.
messages: Nucleus
messages: Plants lacking SOM germinate in darkness, independently of various light regimens.
messages: Probable transcription repressor that functions as negative regulator of phytochrome-mediated promotion of seed germination. Inhibits seed germination by regulating the expression of gibberellic acid (GA) and abscisic acid (ABA) metabolic genes. Does not regulate the expression of the DELLA genes RGA and RGA1. Activated by PIL5, a phytochrome-interacting basic helix-loop-helix transcription factor (PubMed:18487351). Represses directly JMJ20 and JMJ22 expression in the absence of red light (R) and in far-red (FR) conditions (PubMed:22483719).
messages: Specifically expressed in seeds.

3702:AT2G23670
gene id: 3702:AT2G23670
uniprot id: A0A178VUP0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G67480
gene id: 3702:AT1G67480
uniprot id: A0A178WJ34
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G25830
gene id: 3702:AT3G25830
uniprot id: P0DI76
uniprot id: P0DI77
names: Cofactor
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsb subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Involved in monoterpene (C10) biosynthesis. The major product is 1,8-cineole (52%) followed by minor amounts of sabinene (14.5%), myrcene (13.3%), (-)-(1S)-beta-pinene (7.8%), (-)-(4S)-limonene (4.0%), (E)-beta-ocimene (2.7%), alpha-terpineol (2.4%), (-)-(1S)-alpha-pinene (1.9%), terpinolene (0.8%), and (+)-alpha-thujene (0.6%).
messages: May be due to intron retention.
messages: Not induces in aerial parts by treatments with jasmonic acid, 6-ethyl indanoyl-L-Ile, fungal peptaibol elicitor alamethicin or herbivory.
messages: Predominantly expressed in roots and at much lower levels in siliques. Not found in leaves, flowers or stems. Also detected in flowers in cv. Landsberg erecta. Not expressed in root apical meristem and elongation zone. Found in the vascular system of young roots and additionally in the cortex and epidermal cell layer of older roots.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).
messages: chloroplast

3702:AT1G13440
gene id: 3702:AT1G13440
uniprot id: A0A178W4Q5
uniprot id: F4HQT1
uniprot id: Q9FX54
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
messages: Cytoplasm
messages: Homotetramer (By similarity). Interacts with PLDDELTA (By similarity). Binds to DPB3-1/NF-YC10 in response to heat-stress; this interaction promotes DPB3-1/NF-YC10 DNA-binding ability to its target promoter (PubMed:32651385).
messages: Inhibition by oxidized glutathione (GSSG), S-nitrosoglutathione (GSNO) and hydrogen peroxide.
messages: Key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Essential for the maintenance of cellular ATP levels and carbohydrate metabolism (By similarity). Binds DNA in vitro (PubMed:22589465). Together with DNA polymerase II subunit B3-1 (DPB3-1) and GAPC1, enhances heat tolerance and promotes the expression of heat-inducible genes (PubMed:32651385).
messages: Nucleus
messages: Plants contain three types of GAPDH: NAD-dependent cytosolic forms which participate in glycolysis, NAD-dependent chloroplastic forms which participate in plastidic glycolysis and NADP-dependent chloroplastic forms which participate in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). All the forms are encoded by distinct genes.
messages: S-glutathionylation at Cys-156 in the presence of oxidized glutathione (GSSG). S-nitrosylation at Cys-156 and Cys-160 in the presence of S-nitrosoglutathione (GSNO) or sodium nitroprusside (SNP). These reactions may be both a protective mechanism against irreversible oxidation and a mean to store inhibited enzyme in a recoverable form.
messages: The double mutant gapc1 gapc2 has an impaired ability to enhance heat tolerance of seedlings and to promote the expression of heat-inducible genes.

3702:AT1G10400
gene id: 3702:AT1G10400
uniprot id: A0A384L396
uniprot id: Q9SY84
uniprot id: W8Q3T6
names: Caution
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G34140
gene id: 3702:AT2G34140
uniprot id: A0A654F031
uniprot id: O22967
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Circadian-regulation. The transcript level rises progressively from dawn and decreases during the night.
messages: Expressed in the vasculature of cotyledons and hypocotyls, leaves and roots.
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Transcriptional repressor of 'CONSTANS' expression (By similarity). Regulates a photoperiodic flowering response.

3702:AT2G28900
gene id: 3702:AT2G28900
uniprot id: A0A178VQE6
uniprot id: Q9ZV24
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family. Plastid outer envelope porin OEP16 (TC 1.B.30) subfamily.
messages: Expressed predominantly in leaves and cotyledons.
messages: Homodimer and oligomers in membrane (By similarity). Forms large complexes including TOC33, pPORA and OEP161 during pPORA import into plastids at the plastid envelope membrane.
messages: Membrane
messages: Stimulated by GTP.
messages: Strong red Pchlide fluorescence after 3.5-4 days of growth in the dark, and cell death after subsequent illumination. Conditional seedling lethal phenotype related to defects in import and assembly of NADPH:protochlorophyllide (Pchlide) oxidoreductase A; excess Pchlide accumulated in the dark operates as photosensitizer and provokes cell death during greening.
messages: Transient reduction upon de-etiolation (illuminated 5-day-old etiolated seedlings) (at protein level). Strongly induced by low-temperature stress and weakly in response to osmotic stress, salicylic acid (SA) and exogenous abscisic acid (ABA) treatments.
messages: Voltage-dependent high-conductance channel with a slight cation-selectivity; selective for amino acids but excludes triosephosphates or uncharged sugars (By similarity). Non-essential amino acid-selective channel protein and translocation pore for NADPH:protochlorophyllide oxidoreductase A (PORA) and possibly PORB. Involved in PORA precursor (pPORA) import and thus confers photoprotection onto etiolated seedlings during greening.
messages: chloroplast outer membrane
messages: etioplast membrane

3702:AT4G31840
gene id: 3702:AT4G31840
uniprot id: A0A654FV42
uniprot id: Q9SZ51
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the early nodulin-like (ENODL) family.
messages: Cell membrane
messages: In flowers, expressed in anthers, pollen and developing ovules (PubMed:17293437). In inflorescences, accumulates mainly in mature pistils (PubMed:27524487). In developing ovules, observed at the micropylar region in a polarized localization of the synergid cells and in inner integument surrounding the female gametophytes (at protein level) (PubMed:27524487). In mature ovules, present in the filiform apparatus and in the integuments at the micropylar region (PubMed:27524487). At later developmental stages, localization shifts from the micropyle toward the chalazal end (PubMed:27524487). Also present in the funiculus and at the junctions between the transmitting tissue and the funiculus (PubMed:27524487). Levels fade out in ovules after pollination and subsequent fertilization (PubMed:27524487).
messages: May act as a carbohydrate transporter (PubMed:24470637). Required, together with ENODL11, ENODL12, ENODL13, ENODL14 and ENODL15, for male-female communication and pollen tube reception and burst at the synergid cell surface of the female gametophyte (PubMed:27524487).
messages: Mostly expressed in seedlings, siliques and flowers, and, to a lower extent, in roots, stems and seeds, but barely in leaves.
messages: No visible phenotype (PubMed:27524487). Plants lacking ENODL11, ENODL12, ENODL13, ENODL14 and ENODL15 have a reduced seed set due to aborted ovules as a result of pollen tubes failling to rupture and release their sperm cell cargo (PubMed:27524487).

3702:AT5G48160
gene id: 3702:AT5G48160
uniprot id: Q9LUB7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By auxin in the root elongation zone.
messages: Expressed in roots, seedlings, stems, leaves, flowers and siliques, especially in the vasculature.
messages: First observed in the embryo proper at the four-cell stage. Later expressed throughout the embryo from the eight-cell to the bent-cotyledon stages. Until the torpedo stage of development, mostly concentrated at the root pole. Hardly detected in the suspensor. Present in seedling roots. In mature and fully differentiated young roots, restricted to root tips.
messages: No visible phenotype. When associated with OBE1 disruption, plants exhibit premature termination of the shoot meristem and impaired root apical meristem establishment, leading to a diminutive phenotype characterized by an absence of roots and defective development of the vasculature.
messages: Nucleus
messages: Probable transcription factor that acts together with OBE1 for the maintenance and/or establishment of both the shoot and root meristems, probably by controlling the expression of the meristem genes such as WUS, PLT1 and PLT2 and of genes required for auxin responses. Promotes cell meristematic activity via the WUSCHEL-CLAVATA pathway. Involved in the development of the basal pole and in auxin-mediated root and vascular development in the embryo. Confers sensitivity to turnip mosaic virus (TuMV) probably by promoting viral movement and multiplication via interaction with TuMV VPg.
messages: Self-interacts (PubMed:18403411, PubMed:19392692, PubMed:22378640). Interacts with OBE1, OBE3 and OBE4 (PubMed:19392692, PubMed:22378640). Binds to VPg of pea seed borne mosaic virus (PSbMV), turnip mosaic virus (TuMV) and lettuce mosaic virus (LMV), but not with VPg of tobacco etch virus (TEV), cowpea mosaic virus (CPMV), tomato black ring virus (TBRV) and grapevine fan leaf virus (GFLV) (PubMed:14963126).

3702:AT4G16350
gene id: 3702:AT4G16350
uniprot id: A0A654FPX1
uniprot id: Q9C5P6
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
messages: Belongs to the calcineurin regulatory subunit family.
messages: Homodimer.
messages: Homodimer. Interacts with CIPK.
messages: Membrane
messages: S-acylated by PAT10.
messages: Vacuole membrane

3702:AT1G67940
gene id: 3702:AT1G67940
uniprot id: Q9C9W0
names: Similarity
messages: Belongs to the ABC transporter superfamily. ABCI family.

3702:AT4G17280
gene id: 3702:AT4G17280
uniprot id: Q8VYH6
names: Cofactor
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: DOMON domain could bind catecholamines and thereby could regulate the cytochrome b561 domain function (PubMed:15022831). DOMON domain could bind one heme b (PubMed:19386804).
messages: May act as a catecholamine-responsive trans-membrane electron transporter.
messages: Membrane

3702:AT5G04320
gene id: 3702:AT5G04320
uniprot id: A0A1P8BFE9
uniprot id: Q0WTB8
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the shugoshin family.
messages: Dispensable for both meiotic and mitotic cell cycle progression (PubMed:24206843, PubMed:23884434). Required with SGO1 for full protection of centromeric cohesion during anaphase I (PubMed:24206843). Required to prevent precocious release of pericentromeric cohesins during meiosis (PubMed:24206843). Acts redundantly to SGO1 (PubMed:24506176).
messages: Knock-down mutants show no meiotic or vegetative defects and no reduced fertility (PubMed:24206843, PubMed:23884434). Sgo1 and sgo2 double mutants are almost completely sterile and show a premature separation of sister chromatids at anaphase I (PubMed:24506176).
messages: Shugoshin is Japanese for guardian spirit.

3702:AT3G60790
gene id: 3702:AT3G60790
uniprot id: Q9LZY4
names: Miscellaneous
messages: Incomplete sequence. May be due to an intron retention.

3702:AT2G19190
gene id: 3702:AT2G19190
uniprot id: O64483
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Highly induced by WRKY22 or WRKY29 and by WRKY6 in senescent leaves. Also induced 30 minutes after flagellin treatment.
messages: Involved in innate immune response of plants.
messages: Membrane

3702:AT5G39120
gene id: 3702:AT5G39120
uniprot id: A0A654G6S0
uniprot id: Q9FIC9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT5G38435
gene id: 3702:AT5G38435
uniprot id: A0A178UHT8
uniprot id: B3H453
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Mostly expressed in seedlings, stems, leaves and floral tissues, and, to a lower extent, in roots.
messages: Secreted

3702:AT2G35160
gene id: 3702:AT2G35160
uniprot id: A0A178VMZ6
uniprot id: A0A1P8AZY9
uniprot id: O82175
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although the SET domain contains the active site of enzymatic activity, both pre-SET and post-SET domains are required for methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Expressed in leaves stems and flowers.
messages: Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: centromere

3702:AT2G37450
gene id: 3702:AT2G37450
uniprot id: A0A178VYX2
uniprot id: A0A178VYX5
uniprot id: A0A178W1D2
uniprot id: A0A384KV31
uniprot id: F4IQX1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G42590
gene id: 3702:AT5G42590
uniprot id: Q9FH66
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: Possesses triterpene oxidizing activity. Catalyzes the C23 hydroxylation of marneral to form 23-hydroxymarneral. Catalyzes the C23 hydroxylation of marnerol to form 23-hydroxymarnerol.

3702:AT4G12980
gene id: 3702:AT4G12980
uniprot id: Q9SV71
names: Cofactor
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: DOMON domain could bind catecholamines and thereby could regulate the cytochrome b561 domain function (PubMed:15022831). DOMON domain could bind one heme b (PubMed:19386804).
messages: May act as a catecholamine-responsive trans-membrane electron transporter.
messages: Membrane

3702:AT1G65390
gene id: 3702:AT1G65390
uniprot id: Q9C5Q9
names: Domain
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT3G05560
gene id: 3702:AT3G05560
uniprot id: A0A178VBH7
uniprot id: Q9M9W1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL22 family.

3702:AT2G29090
gene id: 3702:AT2G29090
uniprot id: A0A1P8B0J6
uniprot id: O81077
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By abscisic acid, dehydration and rehydration. Expression regulated by phytochrome B.
messages: Involved in the oxidative degradation of abscisic acid, but not in the isomerization of the produced 8'-hydroxyabscisic acid (8'-OH-ABA) to (-)-phaseic acid (PA). Involved in the control of seed dormancy and germination.
messages: Mainly expressed in dry seeds. Lower expression in rosette leaves, flowers, siliques and stems. Not expressed in roots. Expressed in both endosperm and vascular tissues of embryo during the seed development and in cortex and endodermis in germinating embryo.
messages: Membrane
messages: Plants show a hyperdormancy phenotype.
messages: Up-regulated from late-maturation to mature dry seed. Up-regulated immediately after seed imbibition, reaching a maximum at 6 hours and decreasing therafter.

3702:AT1G01670
gene id: 3702:AT1G01670
uniprot id: Q8GXQ7
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G11770
gene id: 3702:AT1G11770
uniprot id: A0A178WP56
uniprot id: Q9SA99
names: Caution
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G47600
gene id: 3702:AT5G47600
uniprot id: A0A178U8V7
uniprot id: Q6NLV0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Cytoplasm
messages: May form oligomeric structures.

3702:AT1G74050
gene id: 3702:AT1G74050
uniprot id: A0A178W8L4
uniprot id: Q9C9C5
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL6 family.

3702:AT1G52827
gene id: 3702:AT1G52827
uniprot id: Q3ECR7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: Cell membrane
messages: Confers resistance to heavy metal ions (e.g. cadmium (CdCl(2)) and copper (CuCl(2))) by chelating them at the plasma membrane of root cells, thus stopping their entry and reducing their accumulation.
messages: Heterodimers (PubMed:29272523). Binds weakly to CYSTM7 and WIH1/CYSTM13 (PubMed:29272523).
messages: Induced by salt, cold and drought.
messages: Involved in resistance to abiotic stress.
messages: Mostly expressed in stems, siliques, leaves and flowers and, to a lower extent, in roots.
messages: Nucleus
messages: cell wall

3702:AT3G55530
gene id: 3702:AT3G55530
uniprot id: Q9M2S6
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase that acts as a positive regulator of abscisic acid-related stress signal transduction (PubMed:17573536, PubMed:18685183). Interacts with and ubiquitinates ATP1/SDIRIP1 to modulate ATP1/SDIRIP1 stability through the 26S proteasome pathway. Regulates abscisic acid (ABA) and salt stress responses by negatively affecting ATP1/SDIRIP1 stability. The SDIR1-ATP1/SDIRIP1 complex plays an important role in ABA signaling through the ubiquitination pathway (PubMed:25616872).
messages: Endoplasmic reticulum membrane
messages: Expressed at all developmental stages.
messages: Interacts with ATP1/SDIRIP1.
messages: Longer primary root and NaCl and ABA insensitivity.
messages: The RING-type zinc finger domain is required for E3 ligase activity.
messages: Ubiquitous.
messages: Up-regulated by salt and drought stress, but not by abscisic acid. The up-regulation is stronger and earlier when the roots are colonized by the endophytic fungus P.indica.

3702:AT5G08570
gene id: 3702:AT5G08570
uniprot id: A0A384L5D5
uniprot id: Q9FNN1
names: Similarity
messages: Belongs to the pyruvate kinase family.

3702:AT2G42170
gene id: 3702:AT2G42170
uniprot id: A0A1P8AXV8
uniprot id: A0A1P8AY15
uniprot id: Q8GWA5
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the actin family.
messages: Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. The binding of profilin to monomeric G-actin cause the sequestration of actin into profilactin complexes, and prevents the polymerization.
messages: cytoskeleton

3702:AT5G27220
gene id: 3702:AT5G27220
uniprot id: A0A1P8BA40
uniprot id: O04650
names: Similarity
messages: Belongs to the Frigida family.

3702:AT3G51240
gene id: 3702:AT3G51240
uniprot id: A0A5S9XJS4
uniprot id: F4J3A5
uniprot id: Q9S818
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R-dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants.
messages: Interacts with Dihydroflavonol-4-reductase (TT3), chalcone synthase (TT4) and chalcone isomerase (TT5) to form a flavonoid enzyme complex.

3702:AT3G51290
gene id: 3702:AT3G51290
uniprot id: A0A178VBJ0
uniprot id: A0A384KMY1
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Defects in primary root elongation and enhanced root hair elongation.
messages: Down-regulated by phosphate deficiency.
messages: Expressed in the root tip of primary and lateral roots, specifically in the meristematic region, including the quiescent center and lateral root cap cells.
messages: Nucleus
messages: Required for the coordination of cell differentiation and cell elongation in the root tip (PubMed:23498857). Required for the coordination of cell processes necessary for correct root growth in response to phosphate starvation, through the modulation of the auxin transporter protein PIN7 (PubMed:23498857).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G17990
gene id: 3702:AT5G17990
uniprot id: Q02166
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anthranilate phosphoribosyltransferase family.
messages: Binds 2 magnesium ions per monomer.
messages: chloroplast

3702:AT1G20300
gene id: 3702:AT1G20300
uniprot id: Q9LN22
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT4G01270
gene id: 3702:AT4G01270
uniprot id: A0A178V281
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G05460
gene id: 3702:AT4G05460
uniprot id: Q9M0U9
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with CUL1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT1G63330
gene id: 3702:AT1G63330
uniprot id: Q9C8T7
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G68370
gene id: 3702:AT1G68370
uniprot id: Q9ZSY2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DnaJ family. B/II subfamily.
messages: Endoplasmic reticulum membrane
messages: Expressed at high levels in root cap, root tip meristematic region and elongation zones, and at lower levels in mature part of roots (at protein level). Constitutively expressed in seedlings, etiolated or not, roots, rosette leaves, cauline leaves, stems, flowers, siliques and pollen.
messages: Golgi apparatus membrane
messages: Plays a continuous role in plant development probably in the structural organization of compartments (By similarity). Seems to be involved in early gravitropic signal transduction within the gravity-perceiving cells (statocytes), where it influences pH changes and auxin distribution. Probably affects the localization and/or activity of auxin efflux carrier components (PIN proteins) or other proteins involved in lateral auxin transport.
messages: Roots and hypocotyls reorient slowly upon gravistimulation. Plants are normal for phototropism and for responses to hormones such as auxin, abscisic acid, gibberellins and ethylene. They also accumulate starch like the wild-type. In response to gravistimulation arg1-2 lacks cytoplasmic pH changes in columella cells and has a bad repartition of auxin that accumulates in root tips instead of forming a gradient.
messages: cytoskeleton

3702:AT4G12600
gene id: 3702:AT4G12600
uniprot id: F4JRD3
uniprot id: Q9SU26
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic ribosomal protein eL8 family.
messages: Common component of the spliceosome and rRNA processing machinery.
messages: nucleolus

3702:AT1G77450
gene id: 3702:AT1G77450
uniprot id: Q9CAR0
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By abscisic acid (ABA) (PubMed:26518251). Induced by salinity and osmotic stress, and during leaf senescence (PubMed:27388337).
messages: Expressed in germinating seeds, roots, leaf veins, open flowers and silique stalks.
messages: Nucleus
messages: Plants silencing NAC032 produce abnormally shaped seeds.
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional activator that positively regulates age-dependent senescence, dark-induced leaf senescence and stress-induced senescence. Regulates leaf senescence through the modulation of the expression of senescence-associated genes SGR1/NYE1, SAG113 and SAUR36/SAG201, which are involved in chlorophyll degradation, and abscisic acid (ABA) and auxin promotion of senescence, respectively. Promotes reactive oxygen species (ROS) production during age-dependent and stress-induced senescence. Regulates positively auxin-mediated responses in roots (PubMed:27388337). Stress-responsive NAC transcription factor involved in ABA-inducible leaf senescence signaling (PubMed:26518251). Required for normal seed development and morphology (PubMed:18849494).

3702:AT5G21100
gene id: 3702:AT5G21100
uniprot id: Q8LPL3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Ascorbate oxidase involved in a redox system involving ascorbic acid (AsA) (PubMed:15883131, PubMed:27255930). The oxidation of AsA represses responses to high salinity and oxidative stress conditions such as vegetative growth and seed production reductions (PubMed:15883131). Negative regulator of defense responses toward incompatible Turnip mosaic virus (TuMV strain UK1) by preventing jasmonic acid (JA)- dependent accumulation of ascorbic acid (AsA, AS) and dehydroascobic acid (DHA) (PubMed:27255930).
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Dimer.
messages: Impaired ascorbate oxidase activity and reduced apoplastic hydrogen peroxide H(2)O(2) and ascorbate peroxidase accumulation, especially in high salinity (PubMed:15883131). Short stems and late flowering (PubMed:15883131). Slightly increased ascorbate (AsA) contents in the apoplasm but lower monodehydroascorbate (DHA) contents (PubMed:15883131, PubMed:27255930). Increased tolerance for high salinity during vegetative growth, seed production and seed germination (PubMed:15883131). Higher resistance to oxidative stress agents such as methyl viologen (MV) and hydrogen peroxide H(2)O(2) (PubMed:15883131). Enhanced resistance to Turnip mosaic virus (TuMV) associated with an increased accumulation of ascorbic acid (AsA, AS) and dehydroascobic acid (DHA) due to a reduction of AS oxidation and activation of AS recycling (PubMed:27255930).
messages: Repressed progressively during incompatible Turnip mosaic virus (TuMV) infection (strain UK1) (PubMed:27255930). When the plant is infected by a compatible TuMV strain (UK1 m2), the down-regulation is transient and last two days (PubMed:27255930).
messages: Secreted

3702:AT4G15396
gene id: 3702:AT4G15396
uniprot id: A0A1P8B7W6
uniprot id: A0A1P8B7X1
uniprot id: F4JK32
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G30060
gene id: 3702:AT4G30060
uniprot id: A0A384KYE2
uniprot id: Q8W4E9
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G07420
gene id: 3702:AT5G07420
uniprot id: Q9LY18
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in flower buds.
messages: cell wall

3702:AT2G34040
gene id: 3702:AT2G34040
uniprot id: A0A654F021
uniprot id: F4IGU7
uniprot id: O22957
names: Similarity
messages: Belongs to the API5 family.

3702:AT3G16640
gene id: 3702:AT3G16640
uniprot id: A0A654F7V9
uniprot id: P31265
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TCTP family.
messages: Expressed in flowers, leaves and stems (PubMed:16902407, PubMed:19060111). Expressed in roots and siliques. Detected in seeds. Highest expression in actively dividing and differentiating cell types, such as the meristematic and division zones of the root, the embryo or the elongating tube of germinating pollen (PubMed:19060111). Expressed in cotyledons, leaves, hypocotyls and roots. Detected in mitotically active tissues such as shoot apical meristems, root tips, lateral root initiation regions and anthers, and in guard cells (PubMed:22610367).
messages: General regulator required for the development of the entire plant. Regulates the duration of cell cycle (PubMed:20736351). Probable activator of Rab GTPases and upstream regulator of the cell growth-regulating TOR (target of rapamycin) network (PubMed:19060111, PubMed:20736351). Might also control spatial growth in pollen tubes or root hairs via the TORC2 signaling branch (PubMed:19060111). Involved in the regulation of abscisic acid- and calcium-mediated stomatal closure, but not in light or H(+)-pumping induced stomatal opening. May regulate microtubules depolymerization (PubMed:22610367). Binds calcium and has a cytoprotective function (PubMed:24040826).
messages: Homodimer. Interacts with the Rab GTPases RABA4A, RABA4B, RABF1 and RABF2B (PubMed:20736351). Interacts with microtubules and heterodimers of alpha- and beta-tubulins. Cytosolic calcium positively regulates this interaction (PubMed:22610367).
messages: Knockdown mutants have retarded growth due to decreased cell size.
messages: Male gametophytic phenotype with normal pollen formation and germination but impaired pollen tube growth (PubMed:19060111). Embryonic lethality when homozygous due to a retarded development of the embryos that eventually collapse at the silique dehiscence stage (PubMed:20736351).
messages: Up-regulated by momilactone B (PubMed:26058145). Not regulated by light (PubMed:19060111). Up-regulated by abscisic acid (PubMed:22610367).
messages: cytosol

3702:AT3G29590
gene id: 3702:AT3G29590
uniprot id: Q9LJB4
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Absence of malonylated anthocyanins.
messages: Belongs to the plant acyltransferase family.
messages: Catalyzes the malonylation of the 5-O-glucose residue of anthocyanins, using malonyl-CoA as the malonyl donor. Acts only on anthocyanin substrates containing a 5-O-glucosyl moiety. Acts on the four native A.thaliana anthocyanins, A3, A7, and to a lesser extent, A6 and A10. Can also use the non-native anthocyanin compounds cyanin (cyanidin 3,5-diglucoside), malvin, pelargonidin 3,5-diglucoside, peonidin 3,5-diglucoside, cyanidin 3-coumaroylglucoside 5-glucoside, delphinidin 3-coumaroylrutinoside 5-glucoside and petunidin 3-coumaroylrutinoside 5-glucoside as substrates. Is the sole enzyme responsible for producing malonylated anthocyanin 5-O-glucosides in A.thaliana. Is not able to catalyze acyl transfer using acetyl-CoA, butyryl-CoA, hexanoyl-CoA, benzoyl-CoA, cinnamoyl-CoA, methylmalonyl-CoA, succinyl-CoA, p-coumaroyl-CoA or caffeoyl-CoA.
messages: Expressed in flowers. Detected in leaves, stems, roots and siliques.
messages: The glycosylation of the coumaroyl group in anthocyanins A6 and A10 likely occurs after malonylation of the 5-glucoside by 5MaT, which could explain why this enzyme is more active on anthocyanins A3 and A7 than on A6 and A10.
messages: Up-regulated by high sucrose and by low phosphate stresses.

3702:AT1G29410
gene id: 3702:AT1G29410
uniprot id: A0A1P8ATF0
uniprot id: A0A1P8ATF1
uniprot id: Q8LPI9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TrpF family.
messages: chloroplast

3702:AT2G19900
gene id: 3702:AT2G19900
uniprot id: A0A178VRX4
uniprot id: A0A1P8B1I3
uniprot id: O82191
names: Cofactor
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the malic enzymes family.
messages: Cytoplasm
messages: Divalent metal cations. Prefers magnesium or manganese.
messages: During embryogenesis, present only in the embryo from the torpedo stage onward. During germination, first restricted to the radicle to later become more pronounced in the root tip. Expressed in hypocotyl and cotyledons 5 days after imbibition.
messages: Homohexamers and homooctamers.
messages: Specifically expressed in roots (only in steles of secondary roots).

3702:AT1G23190
gene id: 3702:AT1G23190
uniprot id: A0A654EHD4
uniprot id: O49299
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphohexose mutase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: This enzyme participates in both the breakdown and synthesis of glucose.

3702:AT2G40780
gene id: 3702:AT2G40780
uniprot id: A0A178VSD9
uniprot id: F4II37
names: Similarity
messages: Belongs to the EIF1AD family.

3702:AT2G40460
gene id: 3702:AT2G40460
uniprot id: A0A5S9X5R5
uniprot id: Q8VZR7
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Down-regulated upon nematode infection.
messages: Expressed in flowers. Detected in stems, leaves and siliques.
messages: Membrane

3702:AT1G02065
gene id: 3702:AT1G02065
uniprot id: Q8GXL3
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Expressed during plant development. During pollen development, required for crosporogenesis that leads to archesporial formation and for the histogenesis of the microsporangia. During ovules development, involved in the transition to meiosis of the megaspore mother cells.
messages: Expressed in shoot apical region and early floral tissues. Transcripts levels increase in developing pollen sacs, and decrease in later stage of anther development. Strongly expressed in the placental region of the carpels.
messages: Nucleus
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Binds specifically to the 5'-GTAC-3' core sequence. Involved in development and floral organogenesis. Required for ovule differentiation, pollen production, filament elongation, seed formation and siliques elongation. Also seems to play a role in the formation of trichomes on sepals. May positively modulate gibberellin (GA) signaling in flower.

3702:AT1G66070
gene id: 3702:AT1G66070
uniprot id: A0A178WCY1
uniprot id: Q9C8D8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit J family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3702:AT1G05230
gene id: 3702:AT1G05230
uniprot id: A0A1P8AUV2
uniprot id: A0A5S9SPD3
uniprot id: B3H6Y4
uniprot id: B9DFH8
uniprot id: Q94C37
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Expressed in hairless cell files of the hypocotyl epidermis. Expressed in shoot apical meristem (SAM) with higher levels in L1 cells and the epidermal layer of young leaves (PubMed:16778018). Expressed in primary root tips, in the L1 of apical inflorescence meristems, early flower primordia, carpel epidermis, ovule primordia, nucellus, chalaze and seed coat (PubMed:16778018).
messages: Interacts with AIL7/PLT7, ANT, BBM and AIL1.
messages: Nucleus
messages: Probable transcription factor (By similarity). Involved, together with PDF2, in the regulation of flower organs development by promoting the expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers (PubMed:23590515).
messages: The double mutant pdf2-1 hdg2-3 exhibits abnormal flowers with sepaloid petals and carpelloid stamens in association with a reduced expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers.

3702:AT5G27310
gene id: 3702:AT5G27310
uniprot id: Q3E914
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G15510
gene id: 3702:AT3G15510
uniprot id: Q9LD44
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By Jasmonic acid (JA).
messages: Expressed throughout anthers from stages 8 to 12. Later confined to distal region of anthers from stage 13.
messages: Nucleus
messages: Stamen specific, in anthers from stage 8 (PubMed:15100403, PubMed:16055634). Expressed in the outer integument, but seems not expressed in the embryo at the torpedo stage (PubMed:18849494).
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494).
messages: When associated with disruption in NAC018/NARS2, abnormally shaped seeds, defect in embryogenesis sometimes arrested at the torpedo-shaped embryo stage thus leading to partial embryonic lethality, markedly delayed integuments degeneration, and delay of silique senescence.

3702:AT4G22285
gene id: 3702:AT4G22285
uniprot id: A0A1P8B8V0
uniprot id: Q8H148
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G33890
gene id: 3702:AT4G33890
uniprot id: A0A654FV90
uniprot id: O81757
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G05700
gene id: 3702:AT1G05700
uniprot id: C0LGD6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:ArthCp061
gene id: 3702:ArthCp061
uniprot id: A0A1B1W4X6
uniprot id: P56798
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3702:AT3G57860
gene id: 3702:AT3G57860
uniprot id: A0A178VGZ1
uniprot id: Q9M2R1
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Subunit
names: Tissue Specificity
messages: Ectopic endomitosis during somatic cell division leading to gigas cells, large guard cells, and round cells containing large polyploid nuclei in cotyledons. Enhancer of the myb3r4 mutant phenotype. Enhancer of bon1-2 phenotype, leading to dwarf and bushy phenotype with many lateral shoots. Production of diploid gametes by skipping the second meiotic division; male meiosis leads to dyads instead of tetrads, and selfed progeny provides tetraploids (4n) and triploids (3n), but no diploid (2n) plants.
messages: Expressed in rapidly dividing tissues such as shoot apical meristem and young leaves. Associated with cell division but also with specific cell types.
messages: Interacts with APC/C activators such as FZR1, FZR2, FZR3, CDC20.1 and CDC20.5.
messages: Levels fade progressively in a basipetal fashion as the leaf develops. In the epidermis of cotyledons and leaves, observed in dividing and recently divided stomatal precursor cells, especially in dividing guard mother cells and young guard cells. Also present in asymmetrically dividing meristemoid mother cells and meristemoids. In roots, expressed preferentially in the division zones of root tips.
messages: Negative regulator of the anaphase-promoting complex/cyclosome (APC/C) ubiquitin ligase required for proper mitotic and meiotic progression and cell fate determination. Involved in entry into both meiosis I and meiosis II. Prevents endomitosis by preferentially inhibiting APC/C(CDC20). Required for megagametophyte and endosperm development. Triggers mitotic cyclins (e.g. CYCB1-1 and CYCB1-2) accumulation. Confers immunity to bacterial pathogens (e.g. Pseudomonas syringae pv. tomato DC3000), which is associated with increased expression of disease resistance (R) genes. GIG1 and PANS1 are part of a network linking centromere cohesion and cell cycle progression through control of APC/C activity.
messages: Phosphorylated by CDKA-1 in complex with CYCA1-2.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02990
gene id: 3702:AT3G02990
uniprot id: A0A178VCY3
uniprot id: Q9SCW5
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class A subfamily.
messages: Cytoplasm
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motif is a transcriptional activator element.
messages: Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT1G44895
gene id: 3702:AT1G44895
uniprot id: A0A1P8APK6
names: Similarity
messages: Belongs to the MCM family.

3702:AT3G48210
gene id: 3702:AT3G48210
uniprot id: Q93VK9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity to ensure proper cell division.
messages: Belongs to the SPC25 family.
messages: Component of the NDC80 complex, which consists of NDC80, NUF2, SPC24 and SPC25.
messages: centromere

3702:AT3G21350
gene id: 3702:AT3G21350
uniprot id: F4IXJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 6 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).
messages: Component of the Mediator complex. Interacts with MED2.
messages: Nucleus

3702:AT3G05675
gene id: 3702:AT3G05675
uniprot id: A0A178VMR2
uniprot id: Q8RX01
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT1G04900
gene id: 3702:AT1G04900
uniprot id: A0A178WEZ0
uniprot id: Q94C90
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
messages: Belongs to the NDUFAF7 family.
messages: Mitochondrion

3702:AT5G57815
gene id: 3702:AT5G57815
uniprot id: A0A178UHL9
uniprot id: Q945L0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome c oxidase subunit 6B (TC 3.D.4.8) family.
messages: Belongs to the cytochrome c oxidase subunit 6B.
messages: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation.
messages: Mitochondrion
messages: Specifically expressed in roots.
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. This protein may be one of the heme-binding subunits of the oxidase.

3702:AT4G33870
gene id: 3702:AT4G33870
uniprot id: O81755
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT5G43140
gene id: 3702:AT5G43140
uniprot id: A0A1P8BGJ9
uniprot id: A0JQ86
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3702:AT3G23715
gene id: 3702:AT3G23715
uniprot id: A0A5S9XGL7
uniprot id: P82632
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G07290
gene id: 3702:AT3G07290
uniprot id: Q9SFV9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G28180
gene id: 3702:AT3G28180
uniprot id: Q9LJP4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like C subfamily.
messages: Beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose (PubMed:17488821, PubMed:32737163). Associates with other xyloglucan-synthesizing enzymes to form multiprotein complexes for xyloglucan synthesis in the Golgi (PubMed:25392066).
messages: Expressed in seedlings, roots, leaves, stems, flowers and seeds.
messages: Golgi apparatus membrane
messages: Homodimer (PubMed:22665445). Interacts with XXT5 (PubMed:22665445). Interacts with FUT1, MUR3 and XLT2 (PubMed:25392066).
messages: Normal xyloglucan (XyG) levels (PubMed:32737163). Plants missing several xyloglucan synthases (e.g. CSLC4, CSLC5, CSLC6, CSLC8 and CSLC12) have no detectable XyG levels and several associated phenotypes including reduced stems height and leaves area, as well as shorter root hairs and reduced pollen tube formation ability (PubMed:32737163).

3702:AT1G04070
gene id: 3702:AT1G04070
uniprot id: O64497
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tom22 family.
messages: Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM20 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore (By similarity).
messages: Expressed in roots, flowers, young cotyledons and leaves.
messages: Forms part of the preprotein translocase complex of the outer mitochondrial membrane (TOM complex) which consists of at least 6 different proteins (TOM5, TOM6, TOM7, TOM20, TOM22/TOM9 and TOM40).
messages: Mitochondrion outer membrane

3702:AT4G32360
gene id: 3702:AT4G32360
uniprot id: A0A178V2N4
uniprot id: A0A1P8B7D1
uniprot id: A0A1P8B7D4
uniprot id: A0A1P8B7E6
uniprot id: Q8W3L1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associates in vitro with the adrenodoxin-like protein MFDX1 to form an efficient low potential electron transfer chain that is able to reduce cytochrome C (PubMed:12714594, PubMed:13677469). Functions as accessory mitochondrial protein involved with BIO2 in the plant biotin synthase reaction (PubMed:12714594).
messages: Belongs to the ferredoxin--NADP reductase type 1 family.
messages: Mitochondrion

3702:AT1G18340
gene id: 3702:AT1G18340
uniprot id: A0A5S9V0V9
uniprot id: Q8LF41
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFB4 family.
messages: Component of the 7-subunit TFIIH core complex composed of XPB, XPD, TFB1/GTF2H1, GTF2H2/P44, TFB4/GTF2H3, TFB2/GTF2H4 and TFB5/GTF2H5, which is active in NER. The core complex associates with the 3-subunit CDK-activating kinase (CAK) module composed of CYCH1/cyclin H1, CDKD and MAT1/At4g30820 to form the 10-subunit holoenzyme (holo-TFIIH) active in transcription.
messages: Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription.
messages: Nucleus

3702:AT1G79985
gene id: 3702:AT1G79985
uniprot id: A0A384L2R6
uniprot id: Q9SSD6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SYS1 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT5G46240
gene id: 3702:AT5G46240
uniprot id: Q39128
uniprot id: Q67YG3
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.
messages: Expressed in guard cells, and in roots.
messages: Highly selective inward-rectifying potassium channel. This voltage-gated channel could mediate long-term potassium influx into guard cells leading to stomatal opening. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. The channel activity is enhanced upon external acidification. Also permeable to ammonium ions. Blocked by tetraethylammonium and barium ions.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Potassium channel.
messages: The KHA domain (rich in hydrophobic and acidic residues) present in the C-terminal part is likely to be important for tetramerization.
messages: The potassium channel is composed of a homo- or heterotetrameric complex of pore-forming subunits.
messages: The potassium channel is probably composed of a homo- or heterotetrameric complex of pore-forming subunits. May interact with AKT2 and KAT2 (Probable). Interacts with SLAC1 and SLAH3 (PubMed:27002025).
messages: The segment S4 is probably the voltage-sensor and is characterized by a series of positively charged amino acids. The pore-forming region H5 is enclosed by the transmembrane segments S5 and S6 in the Shaker-type (1P/6TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity.

3702:AT4G14570
gene id: 3702:AT4G14570
uniprot id: A0A2H1ZEM8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S9C family.
messages: Cytoplasm
messages: Homotetramer.

3702:AT1G19730
gene id: 3702:AT1G19730
uniprot id: Q39239
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioredoxin family. Plant H-type subfamily.
messages: Cytoplasm
messages: Interacts with MDH1.
messages: The active site contains a CPPC motif wich differs from the conserved CGPC motif.
messages: Thiol-disulfide oxidoreductase probably involved in the redox regulation of a number of cytosolic enzymes. Possesses insulin disulfide bonds reducing activity.

3702:AT2G22240
gene id: 3702:AT2G22240
uniprot id: A0A1P8B151
uniprot id: A0A654EV50
uniprot id: F4IIN3
uniprot id: Q38862
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the myo-inositol 1-phosphate synthase family.
messages: Cytoplasm
messages: Expressed in siliques, leaves, roots, seed endosperm, but not in embryos. Highest expression in seeds. In leaves, only expressed in hydathodes and vascular tissue.
messages: Key enzyme in myo-inositol biosynthesis pathway that catalyzes the conversion of glucose 6-phosphate to 1-myo-inositol 1-phosphate in a NAD-dependent manner.
messages: No spontaneous lesion formation and no significant alteration in the response to abscisic acid. Increased susceptibility to bacterial and fungal pathogens.
messages: Was called MIPS1 in PubMed:18603618.

3702:AT1G36980
gene id: 3702:AT1G36980
uniprot id: A0A384KWC9
uniprot id: Q949Z8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0220 family.
messages: Membrane

3702:AT4G39390
gene id: 3702:AT4G39390
uniprot id: F4JW16
uniprot id: Q8RWW7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Nucleotide-sugar transporter that transports UDP-rhamnose or UDP-galactose and UMP in a strict counter-exchange mode.
messages: Ubiquitous.

3702:AT3G21520
gene id: 3702:AT3G21520
uniprot id: A0A654F9D7
uniprot id: Q9LVF4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in tissues undergoing senescence (PubMed:20712629, PubMed:22530652). In roots tips, strongly expressed in the cortex undergoing vacuole biogenesis (PubMed:22530652).
messages: Belongs to the plant DMP1 protein family.
messages: Endoplasmic reticulum membrane
messages: Expressed in leaves, siliques and roots.
messages: Involved in membrane remodeling including fission during breakdown of the endoplasmic reticulum (ER) and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots.
messages: Vacuole membrane

3702:AT2G36730
gene id: 3702:AT2G36730
uniprot id: Q9ZQA1
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G70890
gene id: 3702:AT1G70890
uniprot id: Q9SSK5
names: Similarity
messages: Belongs to the MLP family.

3702:AT5G22470
gene id: 3702:AT5G22470
uniprot id: A0A2H1ZE65
uniprot id: Q9FK91
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARTD/PARP family.
messages: Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity).
messages: Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks.
messages: Nucleus

3702:AT5G58550
gene id: 3702:AT5G58550
uniprot id: Q9LV01
names: Domain
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ETO1 family.
messages: Constitutively expressed in green and etiolated seedlings.
messages: Interacts with the C-terminal domain of ACS5.
messages: Potential regulator of the ethylene pathway, which acts by regulating the stability of 1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes. May act as a substrate-specific adapter that connects ACS enzymes, such as ACS5, to ubiquitin ligase complexes, leading to proteasomal degradation of ACS enzymes (By similarity).
messages: The BTB/POZ-like domain may mediate the interaction with some component of ubiquitin ligase complexes.

3702:AT5G37350
gene id: 3702:AT5G37350
uniprot id: F4K748
uniprot id: Q9FHT0
names: Similarity
messages: Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.

3702:AT5G14530
gene id: 3702:AT5G14530
uniprot id: A0A5S9Y428
uniprot id: Q9LYK6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Altered shoot apical meristem (SAM) and increased growth rates, as well as prolonged vegetative phase and delayed bolting resulting in an impairment of flowering under long days (LD). Altered expression of FLC and SOC1.
messages: Belongs to the WD repeat SWD2 family.
messages: Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus (By similarity). Promotes flowering under long days (LD) via the regulation of bolting (PubMed:27968983).
messages: During seed development, accumulates in the endosperm and in the developing embryo. Strongly expressed following germination throughout seedling growth, especially in aerial part. Present in cotyledons, including the vascular system, hydathodes and trichomes, as well as in young leaves and leaves primordia. In roots, mostly expressed 7 days after sowing. Localized in the central cylinder of roots and the lower hypocotyl area. Observed in the shoot apical meristem (SAM) and in the vascular system, particularly in the xylem parenchyma and phloem. During reproductive development, observed in flowers of stages 13-15, predominantly in the male reproductive tissues, mostly in the developing pollen grains, the anther tissues and the filaments, and, to a lower extent, in the vascular system of sepals and the gynoecium, and in petals. After fertilization, confined to the placenta and the abscission zone of the siliques.
messages: Expressed in the shoot apical meristem (SAM), embryos, seedlings, cotyledons, leaves primordia, young leaves and roots.
messages: Nucleus

3702:AT1G30135
gene id: 3702:AT1G30135
uniprot id: A0A5S9WD74
uniprot id: Q8LBM2
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Acetylated by Pseudomonas syringae HopZ1a.
messages: (Microbial infection) Interacts with the pathogenic Pseudomonas syringae HopZ1a protein.
messages: (Microbial infection) Triggered to degradation by the pathogenic Pseudomonas syringae HopZ1a protein in a COI1-dependent manner, thereby activating host jasmonate signaling.
messages: Belongs to the TIFY/JAZ family.
messages: Interacts with TPL and weakly with COI1, but not with AFPH2/NINJA (PubMed:22327740). Interacts with MYC2, MYB21, MYB24, TIFY10A/JAZ1, TIFY10B/JAZ2, TIFY6B/JAZ3, TIFY6A/JAZ4, TIFY11A/JAZ5, TIFY11B/JAZ6, TIFY7/JAZ9, TIFY9/JAZ10 and TIFY3B/JAZ12 (PubMed:19151223, PubMed:19309455, PubMed:21447791, PubMed:22327740). Interacts with RHD6 and RSL1 (PubMed:31988260).
messages: Nucleus
messages: Repressor of jasmonate responses.
messages: Repressor of jasmonate responses. Unable to associate strongly with COI1 in the presence of jasmonoyl-isoleucine (JA-Ile) and is therefore more resistant to JA-mediated-degradation than other TIFY/JAZ proteins. Repress gene expression through direct recruitment of the corepressor TOPLESS to cognate transcription factors (PubMed:19151223, PubMed:22327740). Interacts with and suppresses RHD6 and RSL1 transcription factor activities to negatively regulate jasmonate-stimulated root hair development (PubMed:31988260).
messages: TIFY5A/JAZ8-mediated repression does not require the tify domain, which, in other TIFY/JAZ proteins, recruits the corepressor TOPLESS through the adapter protein AFPH2/NINJA.
messages: The jas domain (105-127) lacks the canonical jasmonoyl-isoleucine (JA-Ile) degron LPIARR that strongly interact with COI1 in the presence of JA-Ile in other TIFY/JAZ proteins (PubMed:22327740). The LxLxL-type EAR (ERF-associated amphiphilic repression) motif (9-13) is required for the interaction with the corepressor TOPLESS (PubMed:22327740). The jas domain (105-127) is required for interaction with Pseudomonas syringae HopZ1a (By similarity).
messages: The jas domain is required for interaction with COI1.
messages: Ubiquitinated.
messages: Up-regulated by jasmonate, wounding and herbivory.

3702:AT2G26830
gene id: 3702:AT2G26830
uniprot id: O81024
names: Function
names: Similarity
messages: Belongs to the choline/ethanolamine kinase family.
messages: Involved in phospholipid biosynthesis. Catalyzes the first step in phosphatidylethanolamine biosynthesis (By similarity).

3702:AT5G42150
gene id: 3702:AT5G42150
uniprot id: A0A178UT50
uniprot id: Q9FHX0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily.
messages: Membrane

3702:AT1G30545
gene id: 3702:AT1G30545
uniprot id: A0A1P8ASE2
uniprot id: A0A1P8ASE3
uniprot id: A0A654EFR2
names: Similarity
messages: Belongs to the methyltransferase superfamily. Trimethylguanosine synthase family.

3702:AT5G44920
gene id: 3702:AT5G44920
uniprot id: Q0WSX8
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Could play a role in nuclear morphology, specifically nuclear size.
messages: Forms homomers. Interacts with SUN1, SUN2, SUN3, SUN4 and SUN5.
messages: Nucleus membrane
messages: Shorter roots.
messages: The KASH domain, which contains a transmembrane domain, mediates the nuclear envelope targeting and is involved in the binding to the SUN proteins.
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT1G58470
gene id: 3702:AT1G58470
uniprot id: Q9C652
names: Developmental Stage
names: Function
names: Tissue Specificity
messages: Expressed in joints of immature siliques, decreases with maturation and not detected in the joints of mature siliques.
messages: Highly expressed in inflorescences and roots. Detected in leaves and seedlings, but not in stems. Expressed in vegetative shoot apex and root meristem, but not in root cap. Detected in flower buds, junction of pedicels, joints of immature siliques and pistil.
messages: RNA binding protein. Can also bind in vitro to single-stranded DNA.

3702:AT1G71130
gene id: 3702:AT1G71130
uniprot id: A0A178WNZ8
uniprot id: Q9C995
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G04060
gene id: 3702:AT2G04060
uniprot id: Q8S8A7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 35 family.
messages: apoplast

3702:AT4G02320
gene id: 3702:AT4G02320
uniprot id: A0A178V0A5
uniprot id: O81301
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in flower buds.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT2G01330
gene id: 3702:AT2G01330
uniprot id: Q9ZU34
names: Function
names: Subunit
names: Tissue Specificity
messages: Binds actin. Enhances the F-actin depolymerization activity of actin-depolymerizing factor (ADF) proteins.
messages: Expressed in flower buds and flowers.
messages: Interacts with ADF2.

3702:AT2G44740
gene id: 3702:AT2G44740
uniprot id: A0A178VXY9
uniprot id: O80513
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family. Cyclin U/P subfamily.
messages: Expressed in roots, stems and flowers. Expressed in the shoot apex, leaf primordia and young leaves.
messages: Interacts with CDKA-1.

3702:AT5G45010
gene id: 3702:AT5G45010
uniprot id: A0A384KQL4
uniprot id: Q2PDG4
uniprot id: Q9FL96
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DSS1/SEM1 family.
messages: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Nucleus
messages: Part of the 26S proteasome (By similarity). Interacts with BRCA2B (PubMed:16415210). Interacts with EER5 (PubMed:19843313). Interacts with UCH1 and UCH2 (PubMed:22951400).
messages: Subunit of the 26S proteasome which plays a role in ubiquitin-dependent proteolysis (By similarity). Associates also with the TREX-2 complex that is required for transcription-coupled mRNA export (PubMed:19843313).

3702:AT5G15160
gene id: 3702:AT5G15160
uniprot id: A0A5S9Y4M7
uniprot id: Q9LXG5
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. Regulates light responses by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. May have a regulatory role in various aspects of gibberellin-dependent growth and development.
messages: Belongs to the bHLH protein family.
messages: Expressed in roots, leaves, stems and flowers.
messages: Interacts with HFR1.
messages: Not induced by exogenous gibberellin.
messages: Nucleus
messages: Plants over-expressing PRE2 show long hypocotyls, pale green and slightly narrow leaves, elongated petioles and early flowering. They are not sensitive to the gibberellin inhibitor paclobutrazol during seed germination (PubMed:16527868).

3702:AT2G36560
gene id: 3702:AT2G36560
uniprot id: Q9SJQ2
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT2G23930
gene id: 3702:AT2G23930
uniprot id: A0A5S9X0K7
uniprot id: A8MSG1
uniprot id: O82221
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP Sm proteins family.
messages: Nucleus
messages: Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome.

3702:AT3G14130
gene id: 3702:AT3G14130
uniprot id: A0A1I9LRL0
uniprot id: A0A1I9LRL2
uniprot id: Q9LJH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
messages: Homotetramer.
messages: Oxidase that catalyzes the oxidation of a broad range of 2-hydroxyacids to the corresponding 2-oxoacids, with a reduction of O2 to H2O2. Displays the highest activity with the long-chain fatty acid 2-hydroxydodecanoate and has intermediate activity with 2-hydroxyhexanoate, 2-hydroxyoctanote, and the short-chain hydroxyacid (S)-lactate (L-lactate). With much lower activity, it can also use glycolate, leucic acid, valic acid, and isoleucic acid as substrates in vitro. Cannot use 2-hydroxyhexadecanoate or D-lactate as substrates. May be involved in a general medium- and long-chain fatty acid catabolic pathway such as alpha-oxidation.
messages: Peroxisome

3702:AT2G41820
gene id: 3702:AT2G41820
uniprot id: O22938
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Tyr protein kinase family.
messages: Cell membrane
messages: Expressed in the vascular strands of cotyledons, the shoot apex, hypocotyls, roots, leaves, stems and flowers.
messages: Leucine-rich repeat receptor-like protein kinase that may play a role in vascular tissues development.

3702:AT3G45780
gene id: 3702:AT3G45780
uniprot id: O48963
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 molecules of FMN bind covalently to cysteines after exposure to blue light and are reversed in the dark.
messages: Autophosphorylated in response to blue light irradiation.
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Binds 2 FMN per subunit.
messages: Cell membrane
messages: Cytoplasm
messages: Enhanced drought tolerance, when associated with PHOT2 disruption.
messages: Homodimer; disulfide-linked. Interacts with PKS1, PKS2, RPT2, RPT3, PHOT2 and BLUS1 (PubMed:10542152, PubMed:15031408, PubMed:16777956, PubMed:18585389, PubMed:20071603, PubMed:23811955). Subunit of a complex made of CAR6, PHOT1 and RPT3/NPH3 (PubMed:21367967).
messages: Protein kinase that acts as a blue light photoreceptor in a signal-transduction pathway for photo-induced movements. Phosphorylates BLUS1, a kinase involved in stomatal opening. Required for blue light mediated mRNA destabilization. Mediates calcium spiking of extracellular origin in response to a low rate of blue light. Also mediates rapid membrane depolarization and growth inhibition in response to blue light. Necessary for root phototropism. Involved in hypocotyl phototropism under a low rate but not under a high rate of blue light. Contributes to the chloroplast accumulation but seems not to be required for chloroplast translocation. Regulates stomata opening and photomorphogenesis response of leaf tissue. Confers sensitivity to drought. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening.
messages: The activation loop within the kinase domain is the target of phosphorylation (By similarity). The PAS (PER-ARNT-SIM) domains are required for the binding of FMN chromophores.
messages: Undergoes a photocycle characterized by fluorescence and absorption changes induced by blue light. Half-time of photoproduct formation is 14 seconds and 70 seconds for dark regeneration.

3702:AT5G18600
gene id: 3702:AT5G18600
uniprot id: A0A5S9Y5A9
uniprot id: Q8L8Z8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.

3702:AT4G12050
gene id: 3702:AT4G12050
uniprot id: A0A178V276
uniprot id: Q9SZ70
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT4G30860
gene id: 3702:AT4G30860
uniprot id: A0A178UX33
uniprot id: Q949T8
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
messages: Chromosome
messages: Expressed in roots, flowers and buds, the anther and in stamen filaments.
messages: First observed at low levels in the vasculature and around hydathodes of developing leaves. In flowers, restricted to anthers tapetum at a post-meiosis stage, to filaments, and to microspores during their development. Disappears as pollen matures. In developing roots, expressed throughout the lower part, in the cap, in the epidermis and in non-epidermal tissue in the division and elongation zone. Also detected in cells lining lateral root formation.
messages: Histone methyltransferase (By similarity). Involved in stamen development.
messages: Interacts with AMS/bHLH21 by its SET domain and PHD finger.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02280
gene id: 3702:AT3G02280
uniprot id: A0A654FDV5
uniprot id: Q6NPS8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NADPH-dependent diflavin oxidoreductase NDOR1 family.
messages: Cytoplasm
messages: Embryonic lethality when homozygous. Embryo development arrested at 2 to 4-cell stages.
messages: Expressed in cell cycle-dependent manner. Most abundant at the G2 and G2/M transition. Lowest expression in S and M phases.
messages: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: In the N-terminal section; belongs to the flavodoxin family.
messages: Interacts with At5g18400.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: NADPH-dependent reductase which is a central component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Transfers electrons from NADPH via its FAD and FMN prosthetic groups to the [2Fe-2S] cluster of the anamorsin/DRE2 homolog, another key component of the CIA machinery. In turn, this reduced cluster provides electrons for assembly of cytosolic iron-sulfur cluster proteins (By similarity). Catalyzes the NADP-dependent reduction of cytochrome c, but not cytochrome P450 in vitro. Required for embryo development (PubMed:20406405).
messages: NADPH-dependent reductase which is a central component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Transfers electrons from NADPH via its FAD and FMN prosthetic groups to the [2Fe-2S] cluster of the anamorsin/DRE2 homolog, another key component of the CIA machinery. In turn, this reduced cluster provides electrons for assembly of cytosolic iron-sulfur cluster proteins.
messages: Nucleus
messages: Widely expressed.

3702:AT2G22720
gene id: 3702:AT2G22720
uniprot id: A0A1P8AXS7
uniprot id: F4IKF3
uniprot id: Q0WW54
uniprot id: Q9ZQ42
names: Similarity
messages: Belongs to the SPT2 family.

3702:AT2G23440
gene id: 3702:AT2G23440
uniprot id: O80460
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the C-terminally encoded plant signaling peptide (CEP) family.
messages: Extracellular signaling peptide that represses primary root growth rate and significantly inhibits lateral root formation. Promotes shoot growth. Modulates leaf morphology (PubMed:24179096). Regulates systemic nitrogen (N)-demand signaling. Mediates systemic up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386).
messages: Induced by auxin, but repressed by potassium (K) and nitrogen (N) (PubMed:24179095). Accumulates strongly in the roots under nitrogen depletion, and in the shoots under nitrate limitation (PubMed:24179095, PubMed:25324386). Also induced by osmotic stress (e.g. mannitol and NaCl). Strongly repressed in roots by carbon dioxide CO(2) (PubMed:24179095).
messages: Interacts with the CEP receptor CEPR1.
messages: Larger root systems when grown under nitrogen-limiting, acidic, osmotic stress (e.g. mannitol) and high salt conditions, as well as in the presence of sucrose and under decreased or increased light irradiance. Reduced the lateral root density at low temperature (16 degrees Celsius). Increased root and shoot growth when grown hydroponically.
messages: Mostly expressed in roots (PubMed:18315543). Present in lateral roots (especially in vasculature), root-hypocotyl junction and cotyledons (PubMed:24179095).
messages: The mature small signaling peptide is generated by proteolytic processing of the longer precursor.
messages: apoplast

3702:AT2G23140
gene id: 3702:AT2G23140
uniprot id: O22193
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G58520
gene id: 3702:AT1G58520
uniprot id: A0A097NUQ5
uniprot id: A0A654EJW2
uniprot id: F4IBD7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as an osmosensitive calcium-permeable cation channel.
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Membrane

3702:AT5G40460
gene id: 3702:AT5G40460
uniprot id: Q29Q81
names: Function
names: Subunit
messages: Interacts with CDKA-1 and D-type cyclins (PubMed:20706207).
messages: Probable cyclin-dependent protein kinase (CDK) inhibitor that functions as a repressor of mitosis in the endoreduplication cell cycle (By similarity). May inhibit CDKA-1/CYCD complexes during S-phase, preventing the re-initiation of DNA replication (PubMed:20706207).

3702:AT4G38170
gene id: 3702:AT4G38170
uniprot id: Q9SZL7
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development. May act as a negative regulator specific to phyB signaling.
messages: Sequencing errors.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT3G53232
gene id: 3702:AT3G53232
uniprot id: A0A654FGY5
uniprot id: Q8LBB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT3G63420
gene id: 3702:AT3G63420
uniprot id: Q9FDX9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Cytoplasm
messages: Enhanced susceptibility to Alternaria brassicicola, Plectosphaerella cucumerina and Fusarium oxysporum associated with a disturbed expression of genes involved in cell wall metabolism (e.g. lower xylose content in cell walls). Reduced induction of the plant defensin gene PDF1.2, and decreased sensitivity to methyl jasmonate (MeJA). Hypersensitive to auxin-mediated induction of lateral roots, within the central cylinder, attenuating acropetally transported auxin signaling. Enhanced sensitivity to glucose and mannitol during seed germination. Abnormal roots architecture.
messages: G proteins are composed of 3 units, alpha, beta and gamma. Interacts with the beta subunit GB1. The dimer GB1-GG1 interacts with NDL1, NDL2 and NDL3. Binds to NUDT7.
messages: Golgi apparatus membrane
messages: Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. Involved in the abscisic acid (ABA) and ethylene signaling pathways. Regulates acropetal transport of auxin (IAA) in roots and hypocotyls, and thus modulates root architecture (e.g. lateral root formation). The heterotrimeric G-protein controls defense responses to necrotrophic and vascular fungi probably by modulating cell wall-related genes expression; involved in resistance to fungal pathogens such as Alternaria brassicicola, Plectosphaerella cucumerina and Fusarium oxysporum.
messages: In seedlings, first observed at the hypocotyl/root junction but later confined to the hypocotyl. In flowers, restricted to the stigma of mature flowers. In siliques, confined to the abscission zone.
messages: Induced locally by Alternaria brassicicola but systemically by Fusarium oxysporum.
messages: Mostly expressed in seedlings (especially at the hypocotyl/root junction), young cauline leaves, open flowers, and floral stems, and, to a lower extent, in roots (restricted to the stele), rosette leaves (restricted to veins), siliques, and unopened floral buds. Also present in hydathods.
messages: trans-Golgi network membrane

3702:AT5G49570
gene id: 3702:AT5G49570
uniprot id: A5PHD1
uniprot id: Q9FGY9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transglutaminase-like superfamily. PNGase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Specifically deglycosylates the denatured form of N-linked glycoproteins in the cytoplasm and assists their proteasome-mediated degradation. Cleaves the beta-aspartyl-glucosamine (GlcNAc) of the glycan and the amide side chain of Asn, converting Asn to Asp. Prefers proteins containing high-mannose over those bearing complex type oligosaccharides. Can recognize misfolded proteins in the endoplasmic reticulum that are exported to the cytosol to be destroyed and deglycosylate them, while it has no activity toward native proteins. Deglycosylation is a prerequisite for subsequent proteasome-mediated degradation of some, but not all, misfolded glycoproteins (By similarity).

3702:AT1G15370
gene id: 3702:AT1G15370
uniprot id: A0A178WMK2
uniprot id: Q9XI32
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes small subunit family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.

3702:AT3G29350
gene id: 3702:AT3G29350
uniprot id: A0A178VEN2
uniprot id: Q9ZNV8
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt, cold and drought stress.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.
messages: Histidine-containing phosphotransfer domain (HPt) contains an active histidine that mediates the phosphotransfer.
messages: Interacts with the B-type response regulators ARR1, ARR2 and ARR10. Binds to AHK1, AHK2, AHK3, AHK4, AHK5, ETR1 and CKI1.
messages: May be due to an intron retention.
messages: Nucleus
messages: Strongly expressed in flowers and roots. Detected also in leaves, siliques and stems.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.
messages: cytosol

3702:AT3G58310
gene id: 3702:AT3G58310
uniprot id: A0A178V7P3
uniprot id: Q9M2I5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G14990
gene id: 3702:AT3G14990
uniprot id: Q9FPF0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase C56 family.
messages: By high light, copper, hydrogen peroxide, methyl viologen and cis-jasmone, but not methyl jasmonate.
messages: Homodimer (Probable). Interacts with CSD1 and GPX2.
messages: Involved in oxidative stress response. Confers protection against diverse stresses by binding both CSD1 and GPX2 and mediating the cytosolic activation of the Cu-Zn-dependent superoxide dismutase activity of CSD1.
messages: No visible phenotype under normal growth conditions, but mutant plants have increased susceptibility to oxidative stress-induced cell death and accelerated cell death in aging plants.
messages: Nucleus
messages: cytosol

3702:AT1G23800
gene id: 3702:AT1G23800
uniprot id: A0A1P8AQG6
uniprot id: A0A654ECE7
uniprot id: Q8S528
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the aldehyde dehydrogenase family.
messages: Homotetramer.
messages: Mitochondrion matrix
messages: Possesses activity on acetaldehyde and glycolaldehyde in vitro.

3702:AT1G80880
gene id: 3702:AT1G80880
uniprot id: Q9SAH2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT2G26620
gene id: 3702:AT2G26620
uniprot id: O48729
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G24105
gene id: 3702:AT5G24105
uniprot id: Q8L9T8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AG-peptide AGP family.
messages: Cell membrane
messages: Contains 4-hydroxyproline; hydroxylated on Pro-32, Pro-34 and Pro-36.
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT5G63290
gene id: 3702:AT5G63290
uniprot id: A0A654GDL6
uniprot id: Q9FMJ4
names: Similarity
messages: Belongs to the anaerobic coproporphyrinogen-III oxidase family. HemW subfamily.

3702:AT3G02645
gene id: 3702:AT3G02645
uniprot id: P0C897
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0481 family.
messages: Membrane

3702:AT4G34135
gene id: 3702:AT4G34135
uniprot id: Q94C57
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Catalyzes the glycosylation of flavonoids from UDP-glucose. Uses a wide range of flavonoid substrates including flavonols (quercetin, kaempferol, isorhamnetin, 3-OH 7,2',4'-MeO-flavone), flavones (luteolin, apigenin), flavanones (naringenin, hesperetin), flavanonols (taxifolin), isoflavones (genistein, daidzein), flavonol glycosides (quercitrin, isoquercitrin, rutin), and chalcones (isoliquiritigenin). Specific for the C-7 position, with a 20-fold lower activity for the C-3 position.
messages: Expressed in roots and flowers.
messages: Not induced by salicylic acid.

3702:AT1G77580
gene id: 3702:AT1G77580
uniprot id: A0A1P8AVP2
uniprot id: A0A5S9WV82
uniprot id: Q9CAP9
names: Similarity
names: Subunit
messages: Belongs to the FPP family.
messages: Interacts with WPP/MAF proteins.

3702:AT4G00760
gene id: 3702:AT4G00760
uniprot id: O23100
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARR-like family.
messages: Lacks the phospho-accepting Asp (here Glu-66), present in the receiver domain, which is one of the conserved features of two-component response regulators (ARRs) family.
messages: Nucleus

3702:AT1G65670
gene id: 3702:AT1G65670
uniprot id: A0A654ELC4
uniprot id: Q1PFG4
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G38740
gene id: 3702:AT5G38740
uniprot id: A0A654G753
uniprot id: Q9FKR2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G55950
gene id: 3702:AT5G55950
uniprot id: A0A1P8BH28
uniprot id: A0A1P8BH41
uniprot id: A0A1P8BH42
uniprot id: Q9FG70
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT4G17180
gene id: 3702:AT4G17180
uniprot id: Q8GYS2
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT3G15420
gene id: 3702:AT3G15420
uniprot id: A0A384LJ68
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G54600
gene id: 3702:AT5G54600
uniprot id: A0A178U954
uniprot id: A0A654GB77
uniprot id: F4K1S8
uniprot id: P92959
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL24 family.
messages: One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity). Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes (PubMed:22900828).
messages: Part of the 50S ribosomal subunit.
messages: Reduced plant size and pale green leaves.
messages: chloroplast

3702:AT1G14210
gene id: 3702:AT1G14210
uniprot id: A0A178WND2
uniprot id: F4HUG9
names: Similarity
messages: Belongs to the RNase T2 family.

3702:AT3G16000
gene id: 3702:AT3G16000
uniprot id: Q9LW85
names: Function
names: Subcellular Location Annotation
messages: Binds DNA. Interacts with chromatin via matrix attachment regions (MARs). Likely to participate in nuclear architecture by connecting chromatin with the nuclear matrix and potentially with the nuclear envelope (By similarity).
messages: Nucleus matrix

3702:AT1G48480
gene id: 3702:AT1G48480
uniprot id: Q9LP77
names: Disruption Phenotype
names: Domain
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: By not induced by salicylic acid.
messages: Cell membrane
messages: Highly expressed in seedlings and leaves. Lower expression in roots, stems, flowers and siliques. Detected in the vascular tissues of roots, in the trichomes of young rosettes leaves and hydathodes, in the floral abscission zones, in filament apex and stomata cells of anthers, in inflorescence stems and in sepals.
messages: No visible phenotype. Probably due to the redundancy with other receptor-like kinases.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT5G41765
gene id: 3702:AT5G41765
uniprot id: F4JYJ1
names: Similarity
messages: Belongs to the GeBP family.

3702:AT2G21710
gene id: 3702:AT2G21710
uniprot id: A0A1P8AXV1
uniprot id: A0A1P8AXV9
uniprot id: F4IHL3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mTERF family.
messages: Embryo defective. Developmental arrest of the embryo at transition from the globular to heart stage.
messages: Transcription termination factor involved in processing of plastid transcripts (By similarity). Essential for embryogenesis (PubMed:15266054).
messages: chloroplast

3702:AT4G13870
gene id: 3702:AT4G13870
uniprot id: Q84LH3
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated upon interaction with the KU heterodimer. Not stimulated by ATP.
messages: Early flowering. Loss of post-transcriptional gene silencing (PTGS), but not of transcriptional gene silencing (TGS).
messages: Exonuclease that digests recessed strands of DNA duplexes in the 3' to 5' direction but hardly single-stranded DNA or blunt-ended duplexes. Also able to digest 3'-protruding strands and 3'-recessed strand termini of duplexes containing mismatched bases.
messages: Expressed ubiquitously.
messages: Helix-distorting lesions (apurinic sites and cholesterol adducts) and oxidative DNA damage (such as 8-oxoadenine and 8-oxoguanine) block the exonuclease activity, while other DNA modifications such as uracil, hypoxanthine or ethenoadenine have no effects.
messages: Interacts with KU70 and KU80. Interacts with RECQL2.
messages: Nucleus

3702:AT5G64090
gene id: 3702:AT5G64090
uniprot id: A0A178UFA2
uniprot id: Q9FMI8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Hyccin family.
messages: Cell membrane
messages: Membrane
messages: cytosol

3702:AT1G23950
gene id: 3702:AT1G23950
uniprot id: A0A178WGU8
uniprot id: Q9LR97
names: Caution
names: Sequence Caution
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G06310
gene id: 3702:AT3G06310
uniprot id: A0A178VNM9
uniprot id: B3H556
uniprot id: Q9SQT4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Belongs to the complex I NDUFA8 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Contains four C-X9-C motifs that are predicted to form a helix-coil-helix structure, permitting the formation of intramolecular disulfide bonds.
messages: Mitochondrion
messages: Mitochondrion intermembrane space

3702:AT4G35560
gene id: 3702:AT4G35560
uniprot id: F4JN30
uniprot id: Q0WQ40
names: Similarity
messages: Belongs to the WD repeat L(2)GL family.

3702:AT3G48970
gene id: 3702:AT3G48970
uniprot id: A0A178VJD0
uniprot id: A0A384LDW7
uniprot id: Q84K70
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G50030
gene id: 3702:AT1G50030
uniprot id: A0A178WN52
uniprot id: F4I4X6
uniprot id: Q9FR53
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Binding to cauliflower mosaic virus (CaMV) Tav protein is critical for both translation reinitiation and viral fitness (PubMed:21343906). When activated by CaMV P6, promotes CaMV translation by inhibiting cellular autophagy and suppressing both silencing and innate immunity, thus confering sensitivity to P.syringae (PubMed:27120694).
messages: (Microbial infection) Required during infection by some potyvirus such as Watermelon mosaic virus (WMV) but not for turnip mosaic virus (TuMV).
messages: Activated by phosphorylation on Ser-2424 triggered by cauliflower mosaic virus P6 and auxin.
messages: Activation by auxin triggers recruitment to polysomes which release inactive ATPK1/S6K1.
messages: Almost insensitive to rapamycin (PubMed:23963679). Strongly repressed by specific active site inhibitors (asTORis) such as AZD-8055, TORIN2 and WYE-132, and, to a lesser extent, by KU63794, WYE-354 and TORIN1, leading to impaired photoautotrophic growth and abnormally early meristematic cells differentiation (PubMed:23963679, PubMed:23524850). Repression by TORIN1 leads to impaired responses to auxin, including gravitropism (PubMed:23524850). Combined treatment with rapamycin and active-site inhibitors (e.g. Torin1 and AZD-8055) results in synergistic inhibition of activity and plant growth (PubMed:27479935). Inhibition by KU63794 leads to reduced auxin content in root tips (PubMed:27014314). AZD-8055 treatment reduces abscisic acid (ABA) levels (PubMed:26459592). In addition, inhibition by AZD-8055 leads to a strong reduction of watermelon mosaic virus (WMV) infection (PubMed:25979731).
messages: Belongs to the PI3/PI4-kinase family.
messages: Cytoplasm
messages: Embryo lethality when homozygous. Premature arrest of endosperm and embryo development. RNAi mutant exhibits plant growth arrest and reduced expression of brassinosteroid (BR)-responsive genes, as well as abolished exogenous sugar-mediated promotion of BZR1 accumulation (PubMed:27345161). RNAi plants are impaired in sugar-mediated (e.g. glucose and sucrose) root growth promotion and associated genes expression (PubMed:23542588). In response to auxin, deficient plants have polysomes prebound by inactive ATPK1/S6K1, and loading of uORF-mRNAs and activation TIF3H1/eIF3h are impaired (PubMed:23524850). In RNAi plants, severe alteration of watermelon mosaic virus (WMV) infection, but only slight delay of turnip mosaic virus (TuMV) infection (PubMed:25979731). Deficient plants are resistant to viral infection by cauliflower mosaic virus (CaMV), by failing to support CaMV Tav protein-mediated transactivation of reinitiation (PubMed:21343906).
messages: Essential cell growth regulator that controls development from early embryo to seed production. Controls plant growth in environmental stress conditions. Acts through the phosphorylation of downstream effectors that are recruited by the binding partner RAPTOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Can phosphorylate TAP46, a regulatory subunit of protein phosphatase 2A that modulates cell growth and survival (PubMed:21216945). Involved in modulating the transition from heterotrophic to photoautotrophic growth by regulating the expression of chloroplast- and photosynthesis-associated genes (PubMed:27479935). Essential for auxin signaling transduction, probably acting in polysomes to maintain the active ATPK1/S6K1 (and thus TIF3H1/eIF3h) phosphorylation status that is critical for translation reinitiation (e.g. uORF-mRNAs loading) (PubMed:23524850, PubMed:27014314). Promotes abscisic acid (ABA) biosynthesis (PubMed:26459592). Involved in the regulation of sugar-mediated (e.g. glucose and sucrose) glycolysis- and mitochondrial bioenergetics-dependent root growth promotion (PubMed:23542588). Required for sugar (e.g. glucose) promotion of hypocotyl elongation in the dark, by activating the brassinosteroid pathway and stabilizing BZR1. The regulation of BZR1 degradation is dependent on autophagy (PubMed:27345161). Regulates the expression, phosphorylation and ribosome association of MRFs (e.g. MRF1, MRF3 and MRF4), especially under energy-deficient conditions (PubMed:29084871).
messages: Highly expressed in root meristems, shoot apical meristem (SAM) and floral buds.
messages: Inducible silencing in seedlings or adult plants leads to plant growth arrest. Plants slightly silencing TOR show constitutive autophagy and reduced shoot and root growth, leaf size, seed production and resistance to osmotic stress. Plants overexpressing TOR show increased shoot and root growth, leaf size, seed production and resistance to osmotic stress. Plants expressing FKBP12 (BP12) are sensitive to rapamycin. BP12 plants repressed by rapamycin exhibit slower growth and development leading to poor nutrient uptake and light energy utilization.
messages: Interacts with RAPTOR1 and itself. Interacts with FKBP12 in a rapamycin-dependent manner. Binds to LST8-1 (PubMed:22307851). Hyperactivated upon interaction with cauliflower mosaic virus (CaMV) Tav protein (PubMed:21343906).
messages: Nucleus
messages: One day after fertilization, expressed in endosperm, embryo, and the chalazal proliferating tissue. At globular stage, no longer expressed in endosperm, but still in embryo up to the heart and torpedo stages. In mature embryo, expressed in the apical and primary root meristems and dividing vascular tissues. During lateral root formation, expressed in the lateral root primordia and remains during the formation of the emerging secondary root meristem.
messages: The kinase domain is required for its function.

3702:AT5G44580
gene id: 3702:AT5G44580
uniprot id: Q9LU08
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:33514716, PubMed:34535661). Inhibits root growth and regulates root meristems (PubMed:34535661). Promotes ROS production and MAPK (e.g. MPK3, MPK4 and MPK6) activation in a MIK2-dependent manner, thus leading to the up-regulation of immune-related marker genes (e.g. WRKY30, WRKY33 and CYP81F2) (PubMed:34535661).
messages: Cell membrane
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mostly expressed in leaves and seedlings shoots, to a lower extent, in roots, but barely in flowers.
messages: apoplast

3702:AT1G31630
gene id: 3702:AT1G31630
uniprot id: Q9C6V3
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with AGL61/DIANA and AGL62.
messages: Nucleus
messages: Probable transcription factor.

3702:AT3G56980
gene id: 3702:AT3G56980
uniprot id: A0A5S9XLS0
uniprot id: Q9M1K0
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in vascular tissues. Detected in roots.
messages: Homodimer.
messages: Induced by OBP3, auxin and salicylic acid (SA). Repressed by jasmonic acid (JA). Up regulated by iron deficiency in roots and leaves, as well as by nickel, high zinc or high copper treatments. Repressed by high iron, low copper and low zinc treatments.
messages: Nucleus

3702:AT1G35260
gene id: 3702:AT1G35260
uniprot id: Q9C7I7
names: Similarity
messages: Belongs to the MLP family.

3702:AT3G29010
gene id: 3702:AT3G29010
uniprot id: A0A384KW30
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G12587
gene id: 3702:AT3G12587
uniprot id: A0A654F6G5
uniprot id: Q9LHK3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OST4 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT1G79380
gene id: 3702:AT1G79380
uniprot id: Q9SAL0
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Interacts with UBC30, GRXS17 and GLB3.
messages: No visible phenotype under normal growth conditions. The double mutant plants rglg3 and rglg4 show decreased sensitivity to jasmonate.
messages: Nucleus
messages: Possesses E3 ubiquitin-protein ligase in vitro. Acts as upstream modulator of jasmonate (JA) signaling in response to various stimuli, such as JA-inhibited root growth, JA-inductive gene expression, coronatine-mediated pathogen susceptibility, wound-stimulated expression of JA-responsive genes and wound-induced JA biosynthesis (PubMed:22898498). Controls fumonisin B1 (FB1)-triggered programmed cell death (PCD) by modulating the JA signaling pathway. May mediate salicylic acid (SA) suppression of JA signaling in FB1-induced responses (PubMed:25788731). May mediate the formation of 'Lys-48'-linked multiubiquitin chains. Mediates the polyubiquitination and subsequent proteasomal degradation of the target protein GRXS17 (PubMed:27497447).
messages: Repressed by the mycotoxin fumonisin B1.
messages: Widely expressed.

3702:AT2G18193
gene id: 3702:AT2G18193
uniprot id: Q8GW96
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Membrane

3702:AT2G29525
gene id: 3702:AT2G29525
uniprot id: Q56Y01
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sphingomyelin synthase family.
messages: Catalyzes the transfer of the phosphorylinositol group from phosphatidylinositol (PI) to phytoceramide, an essential step in sphingolipid biosynthesis.
messages: Membrane
messages: Mostly expressed in stems and flowers, and, to a lower extent, in leaves, roots and siliques.

3702:AT1G52200
gene id: 3702:AT1G52200
uniprot id: Q9M815
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: Cell membrane
messages: May be involved in heavy metals transport.

3702:AT1G04970
gene id: 3702:AT1G04970
uniprot id: A0A384KL15
uniprot id: Q9MAU5
names: Caution
names: Similarity
messages: Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP (TC 1.C.40) family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G21600
gene id: 3702:AT2G21600
uniprot id: O48671
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RER1 family.
messages: Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
messages: Membrane

3702:AT4G20620
gene id: 3702:AT4G20620
uniprot id: A0A178UZA6
uniprot id: P0CJ49
uniprot id: P0CJ50
uniprot id: P0CJ51
uniprot id: P0CJ52
uniprot id: P0CJ53
uniprot id: P0CJ54
uniprot id: P0CJ55
uniprot id: P0CJ56
uniprot id: P0CJ57
uniprot id: P0CJ58
uniprot id: P0CJ59
uniprot id: P0CJ60
uniprot id: P0CJ61
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G27280
gene id: 3702:AT3G27280
uniprot id: A0A178VIY4
uniprot id: Q9LK25
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the prohibitin family.
messages: Component of a prohibitin multimeric complex in mitochondrial membranes.
messages: Mitochondrion inner membrane
messages: Mostly expressed in proliferative tissues, including vasculature, shoot and root apical tissues. Accumulates in dry seeds.
messages: Observed in all organs primordia and meristems. In cotyledons, hypocotyls and differentiating leaves, present in stomatal meristemoid cells, guard mother cells and trichomes. Within the anthers, transiently expressed in the proximity of the sporogenous tissue. Accumulates in embryos at globular stages, except in suspensor cell. In root elongation zones, mostly present in epidermal cells, particularly in trichoblasts.
messages: Prohibitin probably acts as a holdase/unfoldase for the stabilization of newly synthesized mitochondrial proteins.
messages: Transcripts levels decrease upon imbibition but remains stable at the protein level.

3702:AT1G01590
gene id: 3702:AT1G01590
uniprot id: A0A178W4T7
uniprot id: Q9LMM2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ferric reductase (FRE) family.
messages: Expressed in siliques. Detected in roots.
messages: Ferric chelate reductase involved in iron reduction in roots (By similarity). May participate in the transport of electrons to a Fe(3+) ion via FAD and heme intermediates.
messages: Membrane

3702:AT3G60840
gene id: 3702:AT3G60840
uniprot id: Q9LZY0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MAP65/ASE1 family.
messages: Cell cycle-regulated expression with higher levels during mitosis.
messages: Cytoplasm
messages: Forms a dimer (By similarity). Binds to microtubules (MT). Bundles polymerized MT via the formation of 25-nm crossbridges with centrally located endocytic MT.
messages: Microtubule-associated protein involved in mitotic spindle formation.
messages: Nucleus
messages: spindle pole

3702:AT5G64720
gene id: 3702:AT5G64720
uniprot id: A0A178U9F2
uniprot id: Q9FGG1
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant egg cell-secreted peptide family.
messages: Confined to the egg cell before fertilization, but disappears upon gamete fusion. Also present in zygotes and early embryos.
messages: Cytoplasmic vesicle
messages: Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
messages: Restricted to female reproductive tissues, specifically accumulating in storage vesicles of the unfertilized egg cell.
messages: Secreted

3702:AT3G14610
gene id: 3702:AT3G14610
uniprot id: Q9LUD3
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G15800
gene id: 3702:AT4G15800
uniprot id: Q8L9P8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Expressed in roots, stems, leaves and plants.
messages: Proteolytically cleaved, probably by S1P, a subtilisin-like serine protease (subtilase).
messages: Secreted

3702:AT5G59105
gene id: 3702:AT5G59105
uniprot id: A8MRC8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Contains 8 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G50280
gene id: 3702:AT1G50280
uniprot id: A0A1P8AQY8
uniprot id: Q8RXR6
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT4G21270
gene id: 3702:AT4G21270
uniprot id: A0A178UZL2
uniprot id: Q07970
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: Composed of three structural domains; a small globular N-terminal, a central alpha-helical coiled coil and a large globular C-terminal which is responsible for the motor activity (it hydrolyzes ATP and binds microtubules).
messages: Kinesin that supports microtubule movement in an ATP-dependent manner and has a minus-end directed polarity. Plays a crucial role in spindle morphogenesis in male meiosis. In mitosis, is required for normal microtubule accumulation at the spindle poles during prophase and may play a role in spindle assembly during prometaphase.
messages: Plants show defects in male meiosis, producing an abnormal number of microspores of variable sizes. Dividing cells of mutant plants lack spindle bipolarity in metaphase of mitosis. Kin14c and kin14d double mutant is gametophytically lethal (PubMed:18088313).
messages: cytoskeleton
messages: kinetochore
messages: phragmoplast
messages: spindle

3702:AT3G18160
gene id: 3702:AT3G18160
uniprot id: Q8LDG7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxin-3 family.
messages: Involved in morphology determination of peroxisomes, but not in import of peroxisomal matrix proteins. May act as a docking factor for PEX19 and be necessary for the import of peroxisomal membrane proteins in the peroxisomes.
messages: Peroxisome membrane

3702:AT5G35840
gene id: 3702:AT5G35840
uniprot id: G4WU80
uniprot id: P14714
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the phytochrome family.
messages: Contains one covalently linked phytochromobilin chromophore.
messages: Homodimer.
messages: Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
messages: Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion.

3702:AT1G54115
gene id: 3702:AT1G54115
uniprot id: A0A178W8Z2
uniprot id: Q9SYG9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/calcium exchanger (CCX) subfamily.
messages: Expressed in roots, leaves, stems, flowers and pollen.
messages: Membrane
messages: Membrane-localized H(+)-dependent K(+) and Na(+) transporter.
messages: No visible phenotype.

3702:AT5G05740
gene id: 3702:AT5G05740
uniprot id: A0A5S9Y2J3
uniprot id: A0A654FZ27
uniprot id: F4K0T6
uniprot id: F4K0T7
uniprot id: Q9FFK3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50B family.
messages: Membrane
messages: Probable membrane-associated metalloprotease that may be involved in chloroplast development.
messages: chloroplast membrane

3702:AT2G25625
gene id: 3702:AT2G25625
uniprot id: A0A178VZH8
uniprot id: Q8S8K8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates during senescence.
messages: Delayed chloroplast turnover and senescence induced by abiotic stress and associated with an enhanced tolerance to drought, salinity, and oxidative stress.
messages: Induced by abiotic stresses such as salt stress and methyl viologen (MV)-induced oxidative stress (PubMed:25538186). Triggered by NAC072/RD26 during senescence (PubMed:29659022). Down-regulated by cytokinin (PubMed:25538186).
messages: Interacts with the photosystem II subunit PsbO1 via its C-terminal region in the chloroplast thylakoid membrane and in CV-containing vesicles (CCVs).
messages: Mostly expressed in senescent and mature leaves but not in young leaves.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Triggers stress-induced chloroplast degradation, independently of autophagy and senescence-associated vacuoles (PubMed:25538186). After targeting to the chloroplast, triggers its destabilization and subsequent disassembly, inducing the formation of CV-containing vesicles (CCVs) carrying stromal proteins, envelope membrane proteins, and thylakoid membrane proteins which are released from the chloroplasts and mobilized to the vacuole for proteolysis (PubMed:25538186).
messages: Vacuole
messages: Vesicle
messages: chloroplast envelope
messages: chloroplast membrane
messages: chloroplast thylakoid membrane

3702:AT5G06930
gene id: 3702:AT5G06930
uniprot id: Q0WQA5
names: Similarity
messages: Belongs to the NUP186/NUP192/NUP205 family.

3702:AT3G51320
gene id: 3702:AT3G51320
uniprot id: Q0WVU0
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G13140
gene id: 3702:AT1G13140
uniprot id: A0A178W5A9
uniprot id: F4HP23
uniprot id: Q500V6
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G21410
gene id: 3702:AT4G21410
uniprot id: A0A1P8B8X4
uniprot id: A0A2H1ZEN4
uniprot id: A0A654FRE6
uniprot id: Q8S9L6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT1G72710
gene id: 3702:AT1G72710
uniprot id: A0A178WMS6
uniprot id: Q9CAI5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CK1 Ser/Thr protein kinase family. Casein kinase I subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins.
messages: Cytoplasm
messages: Monomer.
messages: Nucleus

3702:AT3G54270
gene id: 3702:AT3G54270
uniprot id: Q93WU4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the sucrose phosphatase family.
messages: Catalyzes the final step of sucrose synthesis.
messages: Homodimer.

3702:AT3G24030
gene id: 3702:AT3G24030
uniprot id: Q9LIQ4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: Belongs to the Thz kinase family.
messages: No visible phenotype.
messages: Not regulated by thiamine or 4-methyl-5-(2-phosphonooxyethyl)thiazole.
messages: Thiazole kinase involved in thiamine salvage pathway.

3702:AT1G11990
gene id: 3702:AT1G11990
uniprot id: A0A178WL04
uniprot id: A0A384KB25
uniprot id: F4IAL1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G69570
gene id: 3702:AT1G69570
uniprot id: Q9SEZ3
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Circadian-regulation. Highly expressed at the beginning of the light period, then decreases, reaching a minimum between 16 and 29 hours after dawn before rising again at the end of the day.
messages: Early flowering.
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression.

3702:AT1G78270
gene id: 3702:AT1G78270
uniprot id: A0A654EV58
uniprot id: Q9M9E7
uniprot id: W8PV43
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Expressed in roots and shoots.

3702:AT5G07020
gene id: 3702:AT5G07020
uniprot id: Q9FL44
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Altered photosystem II (PSII) function under high-irradiance light (PubMed:25846821). Elevated photodamage to PSII reaction center proteins after high-light treatment (PubMed:26337456).
messages: Interacts with photosystem II (PSII) core complexes and participates in the maintenance of normal PSII activity under photoinhibitory stress. May protect against photodamage or stabilize PSII under high-light stress (PubMed:25846821). Participates in the maintainance of proper PSII function under high-light stress by protecting PSII from photooxidative damage (PubMed:26337456).
messages: Interacts with psbA, psbB, psbC and psbD.
messages: chloroplast thylakoid membrane

3702:AT2G26320
gene id: 3702:AT2G26320
uniprot id: O64840
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G11430
gene id: 3702:AT3G11430
uniprot id: Q9CAY3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GPAT/DAPAT family.
messages: Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis.
messages: Membrane
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: Weakly or not expressed in roots, leaves, seedlings, developing siliques and flower buds.

3702:AT4G30662
gene id: 3702:AT4G30662
uniprot id: A0A178V1I2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G08560
gene id: 3702:AT3G08560
uniprot id: A0A178VP35
uniprot id: Q9C9Z8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase E subunit family.
messages: Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity).
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: Vacuole membrane

3702:AT1G47540
gene id: 3702:AT1G47540
uniprot id: A0A654EH31
uniprot id: F4HTA0
uniprot id: Q42330
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family. Protease inhibitor I18 (RTI/MTI-2) subfamily.
messages: Secreted
messages: Was initially thought to be a protease inhibitor.

3702:AT2G30290
gene id: 3702:AT2G30290
uniprot id: F4IMR9
uniprot id: O22925
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the VSR (BP-80) family.
messages: Expressed only in flowers.
messages: Golgi apparatus membrane
messages: Membrane
messages: Prevacuolar compartment membrane
messages: The tyrosine-based internalization signal may be involved in trafficking at the TGN.
messages: Vacuolar-sorting receptor (VSR) involved in clathrin-coated vesicles sorting from Golgi apparatus to vacuoles.
messages: clathrin-coated vesicle membrane

3702:AT1G16870
gene id: 3702:AT1G16870
uniprot id: A0A654EAI6
uniprot id: Q8W4K2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mS29 family.
messages: Mitochondrion

3702:AT4G19645
gene id: 3702:AT4G19645
uniprot id: A0A384LJI8
uniprot id: Q8GSI6
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G69010
gene id: 3702:AT1G69010
uniprot id: Q9CAA4
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer (Probable). Interacts with the N-terminus of BZR2/BES1.
messages: Nucleus
messages: Positive brassinosteroid-signaling protein.
messages: Repressed by heat treatment.

3702:AT1G30600
gene id: 3702:AT1G30600
uniprot id: A0A178W4M2
uniprot id: Q9SA75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT3G62820
gene id: 3702:AT3G62820
uniprot id: A0A384KS64
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G40540
gene id: 3702:AT5G40540
uniprot id: A0A384LAR9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G37580
gene id: 3702:AT2G37580
uniprot id: O80927
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G43010
gene id: 3702:AT5G43010
uniprot id: A0A178UH77
uniprot id: Q9SEI3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AAA ATPase family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: Nucleus
messages: The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.

3702:AT5G43570
gene id: 3702:AT5G43570
uniprot id: A0A1P8B9R8
uniprot id: F4K626
names: Similarity
messages: Belongs to the protease inhibitor I13 (potato type I serine protease inhibitor) family.

3702:AT5G16900
gene id: 3702:AT5G16900
uniprot id: C0LGT5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G43850
gene id: 3702:AT1G43850
uniprot id: Q8W234
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the adn1/SEU family.
messages: Contains a dimerization domain which shares similarity with the LIM-binding domain of animal transcription coregulators.
messages: DNA-binding adapter subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and LEUNIG to repress AGAMOUS expression. In association with LUG, regulates petal shape through AGAMOUS-independent mechanisms. Controls cell division during petal development and enable the proper patterning of petal blade vasculature. Required for the proper elaboration of petal polarity along the adaxial/abaxial axis. May act through direct or indirect regulation of PHABULOSA and YAB1 and thus regulate cellular proliferation within the developing petal blade. In association with AINTEGUMENTA (ANT), coordinates patterning cues and cellular proliferation along the three positional axes of the developing gynoecium. Required for the development of the medial ridge and subsequent ovule initiation.
messages: Ectopic and precocious expression of AGAMOUS, leading to partial homeotic transformation of the external floral organs.
messages: Expressed in root, leaves, seedlings, vegetative and reproductive shoot apical meristems, seeds, floral meristems and all floral organs.
messages: Forms a corepressor complex with LUG; LUG is the transcription repressor subunit and SEU the specific DNA-binding adapter. Interacts with AGL24-AP1 and SVP-AP1 dimers when complexed to SEU. Interacts with AP1/AGL7 and SEP3/AGL9 (PubMed:15277686, PubMed:16679456, PubMed:16854969). Binds to LUH (PubMed:18390806).
messages: Induced by exposures to biotic stress (e.g. nematode and Botrytis cinerea) and abiotic stress (e.g. salt, genotoxic, wounding, drought and oxidative stress). Repressed by exposures to biotic stress (e.g. Agrobacterium tumefaciens) and abiotic stress (e.g. hypoxia, cycloheximide, 2,4-dichlorophenoxyacetic acid, AgNO(3) and aminoethoxyvinylglycine).
messages: nucleoplasm

3702:AT3G52910
gene id: 3702:AT3G52910
uniprot id: A0A5S9XKD9
uniprot id: Q8L8A7
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRF family.
messages: Expressed during the early stages of leaf development and expression decreases with the maturation of the leaf.
messages: Nucleus
messages: Strongly expressed in actively growing and developing tissues, such as roots, upper stems, and shoot tips containing the shoot apical meristem (SAM) and flower buds. Also expressed in mature flowers, but weakly expressed in mature stems and leaves.
messages: The QLQ domain and WRC domain may be involved in protein-protein interaction and DNA-binding, respectively.
messages: Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation.
messages: Transcription activator.
messages: microRNA 396 (miR396a or miR396b) negatively regulates growth-regulating factors (GRF1-4 and GRF7-9).

3702:AT1G31260
gene id: 3702:AT1G31260
uniprot id: Q8W245
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZIP transporter (TC 2.A.5) family.
messages: Cell membrane
messages: Probably mediates zinc uptake from the rhizosphere.

3702:AT5G48970
gene id: 3702:AT5G48970
uniprot id: A0A178UM23
uniprot id: A0A1P8BB39
uniprot id: Q9FI73
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane
messages: Mitochondrial transporter that mediates uptake of thiamine diphosphate (ThDP) into mitochondria.
messages: Mitochondrion inner membrane

3702:AT1G13780
gene id: 3702:AT1G13780
uniprot id: A0A178W7A6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G16040
gene id: 3702:AT1G16040
uniprot id: A0A1P8APF0
uniprot id: A0A1P8APH0
uniprot id: A0A1P8APM1
uniprot id: A0A654EC98
uniprot id: Q8GWH6
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G62330
gene id: 3702:AT1G62330
uniprot id: F4HYR4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT3G05490
gene id: 3702:AT3G05490
uniprot id: A0A178VIZ8
uniprot id: Q9MA62
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Proteolytically cleaved, probably by S1P, a subtilisin-like serine protease (subtilase).
messages: Secreted

3702:AT5G36140
gene id: 3702:AT5G36140
uniprot id: A0A140JWM8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: Possesses triterpene oxidizing activity. Catalyzes the C28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Catalyzes the C28 carboxylation of alpha- and beta-amyrin. Possesses 22alpha-hydroxylation activity against alpha- and beta-amaryn.

3702:AT2G06050
gene id: 3702:AT2G06050
uniprot id: Q9FUP0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: At the initiation time of the stomium degeneration program, expressed in all floral organs. Later, transcripts levels increase in pistil, petal, stamen filament, and in vascular region close to the stamen filament. When the anther dehiscence is initiated, levels of transcripts decrease, except within the vascular tissues.
messages: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.
messages: Expressed in green seedling, leaves, flowers (anthers, pistil, petal and stamen), and to a lower extent in roots and siliques. Specifically expressed in filament during anther dehiscence initiation.
messages: Induction mediated by wounding and methyl JA (MeJA) needs COI1. Also induced by BR (24-epibrassinolide), UV LIGHT, wind, touch, and the detergent Sapogenat T-110. Seems to not be influenced by salicylic acid, cold and heat treatments (PubMed:11094980, Ref.4). Induced by infection with the fungal pathogens Botritys cinerea and Alternaria brassicicola, insect feeding with Spodoptera littoralis, and wounding (PubMed:29291349).
messages: Male sterility (PubMed:10973494, PubMed:19765234, PubMed:29291349). Fertility can be restored by exogenous jasmonate but not by 12-oxophytodienoic acid (PubMed:10973494, PubMed:19765234, PubMed:29291349). Large petals with altered vein patterning (PubMed:19765234).
messages: Peroxisome
messages: Specifically cleaves olefinic bonds in cyclic enones (PubMed:11094980). Involved in the biosynthesis of jasmonic acid (JA) and perhaps in biosynthesis or metabolism of other oxylipin signaling moleclules (PubMed:29291349, PubMed:10872231, PubMed:10973494). Required for the spatial and temporal regulation of JA levels during dehiscence of anthers, promoting the stomium degeneration program (PubMed:10899973, PubMed:10973494). In vitro, reduces 9S,13S-12-oxophytodienoic acid (9S,13S-OPDA) and 9R,13R-OPDA to 9S,13S-OPC-8:0 and 9R,13R-OPC-8:0, respectively (PubMed:10872231). Can detoxify the explosive 2,4,6-trinitrotoluene (TNT) in vitro by catalyzing its nitroreduction to form hydroxylamino-dinitrotoluene (HADNT) (PubMed:19605548).

3702:AT1G67620
gene id: 3702:AT1G67620
uniprot id: Q9CAF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Iojap/RsfS family.
messages: May be a ribosome silencing factor involved in organelle biogenesis and required for germination.
messages: Mitochondrion

3702:AT3G54940
gene id: 3702:AT3G54940
uniprot id: A0A178V5N1
uniprot id: A0A1I9LTT3
uniprot id: Q8VYS0
names: Function
names: Similarity
messages: Belongs to the peptidase C1 family.
messages: Probable thiol protease.

3702:AT5G16420
gene id: 3702:AT5G16420
uniprot id: Q9FFE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT4G12280
gene id: 3702:AT4G12280
uniprot id: Q9STI3
names: Cofactor
names: PTM
names: Similarity
messages: Belongs to the copper/topaquinone oxidase family.
messages: Contains 1 topaquinone per subunit.
messages: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue.

3702:AT1G49650
gene id: 3702:AT1G49650
uniprot id: Q9FX93
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in leaves, stems, flowers and siliques.
messages: Mitochondrion

3702:AT5G06710
gene id: 3702:AT5G06710
uniprot id: A0A178U8U2
uniprot id: A0A1P8BFV4
uniprot id: P46665
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: Nucleus
messages: Probable transcription factor.

3702:AT2G02480
gene id: 3702:AT2G02480
uniprot id: O64728
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a key regulator of trichome branching through an endoreduplication-independent pathway.
messages: Belongs to the DnaX/STICHEL family.
messages: By gibberellin A3 (GA3).
messages: Interacts with BLT.
messages: Nucleus
messages: PEST motif is known to mediate rapid protein degradation.
messages: Shows trichomes with exclusively no branching.
messages: Ubiquitous.

3702:AT3G55140
gene id: 3702:AT3G55140
uniprot id: A0A654FGQ1
uniprot id: B3LF89
uniprot id: F4JF98
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT5G20330
gene id: 3702:AT5G20330
uniprot id: O49352
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: May play a role in plant defense against pathogens.
messages: Secreted

3702:AT1G13350
gene id: 3702:AT1G13350
uniprot id: A0A1P8ASP4
uniprot id: F4HQR9
uniprot id: Q9FX62
names: Similarity
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family.

3702:AT5G38530
gene id: 3702:AT5G38530
uniprot id: Q9FFW8
names: Function
names: Subunit
messages: Tetramer of two alpha and two beta chains.
messages: The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.

3702:AT5G45750
gene id: 3702:AT5G45750
uniprot id: Q9FK68
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT2G46800
gene id: 3702:AT2G46800
uniprot id: A0A384KM83
uniprot id: Q0WW73
uniprot id: Q9ZT63
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
messages: By treatment with high concentrations of zinc.
messages: Mediates zinc accumulation in roots and confers resistance to zinc (PubMed:23826687). Involved in sequestration of excess zinc in the cytoplasm into vacuoles to maintain zinc homeostasis (PubMed:23826687). Can also transport cadmium with a low efficiency.
messages: Membrane
messages: No visible phenotype under normal growth condition, but hypersensitivity to elevated levels of zinc.
messages: Ubiquitously expressed at low levels.
messages: Vacuole membrane

3702:AT1G08930
gene id: 3702:AT1G08930
uniprot id: A0A178W9Q9
uniprot id: O04036
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: By dehydration and cold treatment (PubMed:9545564). By drought and high salinity conditions, with maximal expression after 1 and 2 hours of exposure to these conditions. Expression in leaves decreases after exposure to the high salinity and abscisic acid (ABA) treatment, but expression in roots remain at a constant level (PubMed:19901034).
messages: Expressed in both shoots and roots. In roots, expressed in epidermal cells and especially strongly in cortex cells. In flowers, expressed in sepals.
messages: Membrane
messages: Sugar transporter.

3702:AT3G01180
gene id: 3702:AT3G01180
uniprot id: A0A654F319
uniprot id: Q9MAC8
uniprot id: W8QNS2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Expressed in roots, leaves and flowers.
messages: Involved in the synthesis of glycan chains within amylopectin in leaves. Is required to produce chains with a degree of polymerization of 12 to 25 (DP12-DP25).
messages: Reduced plant growth under short day photopheriod conditions and starch granules with alterated morphology.
messages: amyloplast
messages: chloroplast

3702:AT1G73700
gene id: 3702:AT1G73700
uniprot id: A0A178W406
uniprot id: Q9C9U1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT3G49640
gene id: 3702:AT3G49640
uniprot id: A0A1I9LMB8
names: Function
names: Similarity
messages: Belongs to the dus family.
messages: Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.

3702:AT3G52800
gene id: 3702:AT3G52800
uniprot id: A0A178VIF4
uniprot id: Q94B40
names: Function
messages: May be involved in environmental stress response.

3702:AT4G24710
gene id: 3702:AT4G24710
uniprot id: A0A1P8B3X3
uniprot id: A0A1P8B3Y3
uniprot id: A0A654FSG2
uniprot id: Q8H1F9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family. PCH2 subfamily.
messages: Chromosome
messages: Nucleus
messages: Plays a key role in chromosome recombination during meiosis.
messages: Plays a key role in chromosome recombination during meiosis. Mediates meiotic chromosome remodeling and crossover maturation.
messages: Reduced fertility. Reduced number of seeds.

3702:AT1G20450
gene id: 3702:AT1G20450
uniprot id: F4HST2
uniprot id: P42759
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant dehydrin family.
messages: By dehydration, cold stress and abscisic acid (ABA). Induction by dehydration occurs after 1 hour and increases to a maximum after 10 hours. Cold stress induction peaks at 1 hour and 5 hours after start of cold exposure.
messages: In stems, cauline leaves, roots and flowers. Low levels found in maturing seeds. Absent in dry seeds.

3702:AT5G20170
gene id: 3702:AT5G20170
uniprot id: F4K460
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 17 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
messages: Component of the Mediator complex.
messages: Nucleus

3702:AT4G23760
gene id: 3702:AT4G23760
uniprot id: A0A178V4Q4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G17430
gene id: 3702:AT2G17430
uniprot id: O22752
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MLO family.
messages: Cell membrane
messages: Endomembrane system
messages: Impaired pollen tube reception in the female gametophyte synergids; the pollen tube fails to arrest and continues to grow inside the female gametophyte.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity). Controls pollen tube reception in the female gametophyte synergids.
messages: Restricted to pollen, synergids, pistils and immature anthers. Also detected in seedlings, leaves, stems and inflorescens.
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT3G56370
gene id: 3702:AT3G56370
uniprot id: Q9LY03
names: Disruption Phenotype
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Highly expressed in root tips, shoot apices and developing flowers.
messages: Interacts with IRKI.
messages: No visible phenotype under normal growth conditions.

3702:AT4G29780
gene id: 3702:AT4G29780
uniprot id: Q84J48
names: Similarity
messages: Belongs to the HARBI1 family.

3702:AT3G21640
gene id: 3702:AT3G21640
uniprot id: Q9LDC0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FKBP-type PPIase family.
messages: Cell membrane
messages: Endoplasmic reticulum
messages: Interacts with calmodulin (CaM), MRP1, MRP2, MDR1/PGP1, MDR11/PGP19 and SHD/HSP90. Interacts with 1-naphthylphthalamic acid (NPA).
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Modulates the uptake of MRP substrates into the vacuole; reduces metolachlor-GS (MOC-GS) and enhances 17-beta-estradiol 17-(beta-D-glucuronide) (E(2)17betaG) uptake. Regulates cell elongation and orientation. Functions as a positive regulator of PGP1-mediated auxin transport. Confers drug modulation of PGP1 efflux activity as interaction with NPA or flavonol quercetin prevents its physical and functional interaction with PGP1. Required for the proper localization of auxin-related ABCB transporters. Plays a role in brassinosteroid (BR) signaling pathway.
messages: Plants display helical rotation of several organs.
messages: Vacuole membrane

3702:AT5G46830
gene id: 3702:AT5G46830
uniprot id: C0SVS8
uniprot id: Q9LUK7
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By UV treatment.
messages: Homodimer.
messages: Nucleus

3702:AT3G47780
gene id: 3702:AT3G47780
uniprot id: Q9STT5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Membrane

3702:AT4G09810
gene id: 3702:AT4G09810
uniprot id: A0A178V113
uniprot id: A0A178V1E0
uniprot id: A0A1P8B632
uniprot id: A0A384KUL6
uniprot id: Q9SZ96
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Nucleotide-sugar transporter that transports UDP-rhamnose or UDP-galactose and UMP in a strict counter-exchange mode.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:ArthCp068
gene id: 3702:ArthCp068
uniprot id: P0CC32
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3702:AT1G49190
gene id: 3702:AT1G49190
uniprot id: Q9M9B9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARR family. Type-B subfamily.
messages: Binds the target DNA as a monomer.
messages: Detected in trichomes and siliques.
messages: Nucleus
messages: Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity).
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT4G38030
gene id: 3702:AT4G38030
uniprot id: A0A178V624
uniprot id: F4JSW8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polysaccharide lyase 4 family.
messages: Secreted

3702:AT1G62150
gene id: 3702:AT1G62150
uniprot id: A0A654EQD1
uniprot id: Q8GWB0
names: Similarity
messages: Belongs to the mTERF family.

3702:AT5G64050
gene id: 3702:AT5G64050
uniprot id: A0A178UAG6
uniprot id: Q9FEA2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
messages: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
messages: Lethal. In heterozygous plants, aborted ovules.
messages: Mitochondrion
messages: chloroplast

3702:AT1G42470
gene id: 3702:AT1G42470
uniprot id: F4I9G5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the patched family.
messages: Membrane

3702:AT1G11475
gene id: 3702:AT1G11475
uniprot id: A0A178WP73
uniprot id: Q8LFJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal Rpo10/eukaryotic RPB10 RNA polymerase subunit family.
messages: Component of the RNA polymerase II, IV and V complexes. Interacts with NRPD1.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements.
messages: Nucleus

3702:AT2G43860
gene id: 3702:AT2G43860
uniprot id: A0A178W275
uniprot id: O22818
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 28 family.
messages: Expressed in developing and germinated seeds in the chalazal region immediately adjacent to the site of penetration of the radicle through the testa.
messages: cell wall

3702:AT3G57290
gene id: 3702:AT3G57290
uniprot id: A0A178VL03
uniprot id: Q9C5Z3
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit E family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex (Potential). Binds to the translation initiation factors TIF3F1 and TIF3H1 (PubMed:20444226, PubMed:15548739). Associates with the CSN (COP9 signalosome) complex. Interacts directly with CSN1, CSN4, CSN6A, CSN6B, CSN7, CSN8 and TIF3C1 (PubMed:11029466, PubMed:19704582). Binds to 40S small ribosomal subunit S9 (RPS9B and RPS9C) via its N-terminal part. Interacts with the 26S proteasome subunit RPN12a via its C-terminal part. Binds also with At1g27930 and At4g30620 (PubMed:19704582).
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (Potential). Regulates negatively translation during flower development (PubMed:18067529, PubMed:20444226).
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm
messages: Nucleus
messages: Several floral development defects, including delayed flowering, reduced sepaloid petals and short stamens. Male gametophytic lethal.
messages: Targeted by the COP9 signalosome to proteasome-dependent degradation.
messages: The PCI domain is protease-resistant.

3702:AT2G37020
gene id: 3702:AT2G37020
uniprot id: A0A178W0K0
uniprot id: A0A384KD48
uniprot id: F4IPY6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the translin family.
messages: Nucleus

3702:AT1G21380
gene id: 3702:AT1G21380
uniprot id: A0A178WFT5
uniprot id: Q9LPL6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TOM1 family.
messages: Membrane
messages: Might contribute to the loading of the ESCRT machinery.
messages: Preferentially expressed in cauline leaves.

3702:AT1G68640
gene id: 3702:AT1G68640
uniprot id: Q9SX27
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bZIP family.
messages: Expressed in the apical meristem, the floral meristem, each whorl of organ primordia, and in ovule primordia during wild-type flower development.
messages: Interacts with GRXC7/ROXY1. Interacts with BOP1 and BOP2.
messages: Mutant plants have extra floral organs. The modal numbers of organs in mutant flowers are 5 sepals, 5 petals, 5 stamens, and 2 carpels in contrast with the tetramerous pattern of the wild type.
messages: Nucleus
messages: Transcriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1.

3702:AT4G27640
gene id: 3702:AT4G27640
uniprot id: A0A178V675
uniprot id: Q8W498
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT5G27230
gene id: 3702:AT5G27230
uniprot id: Q5XV31
names: Similarity
names: Tissue Specificity
messages: Belongs to the Frigida family.
messages: Expressed at low levels during seed development.

3702:AT5G04280
gene id: 3702:AT5G04280
uniprot id: Q8RWN5
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds RNA and DNA sequences non-specifically. May be involved in tolerance to cold stress.
messages: By cold stress.
messages: Expressed in roots, rosette and cauline leaves, stems, floral buds and flowers.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT1G44120
gene id: 3702:AT1G44120
uniprot id: Q9C6Y4
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Associates with cellulase synthase (CESA) complexes. Binds to cortical microtubules.
messages: Cell membrane
messages: Regulator of the microtubular cytoskeleton. Microtubule-associated protein involved in the association of cellulase synthase (CESA) complexes (CSCs) and cortical microtubules. Promotes dynamics of CSCs in the plasma membrane. Regulates primary cell wall biosynthesis and cellulose microfibrils organization.
messages: cytoskeleton

3702:AT3G53220
gene id: 3702:AT3G53220
uniprot id: Q8LCH9
names: Caution
names: Function
names: Similarity
messages: Belongs to the thioredoxin family.
messages: Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.
messages: The active site contains a CGVC motif wich differs from the conserved CGPC motif.

3702:AT3G53720
gene id: 3702:AT3G53720
uniprot id: A0A178V9C6
uniprot id: Q9M353
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: Endomembrane system
messages: Expressed in leaves and stems. Preferentially expressed in guards cells.
messages: Impaired light-induced stomatal opening.
messages: Operates as a K(+)/H(+) antiporter that maintains K(+) homeostasis in guard cells and could regulate pH. Plays a critical role in osmoregulation through the control of stomates opening.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G20935
gene id: 3702:AT3G20935
uniprot id: F4IWB9
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G51460
gene id: 3702:AT5G51460
uniprot id: A0A178UBZ5
uniprot id: A0A178UCG0
uniprot id: O64896
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the trehalose phosphatase family.
messages: By trehalose.
messages: Expressed in flowers.
messages: May be due to a competing acceptor splice site.
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G26555
gene id: 3702:AT4G26555
uniprot id: Q944B0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: chloroplast thylakoid lumen

3702:AT2G39310
gene id: 3702:AT2G39310
uniprot id: A0A654F1K0
uniprot id: O80950
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the jacalin lectin family.
messages: Component of the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.
messages: Inhibitor-type lectin that may regulate the correct polymerization and activation of BGLU23/PYK10 upon tissue damage.
messages: Larger PYK10 complexes.

3702:AT3G20420
gene id: 3702:AT3G20420
uniprot id: Q9LTQ0
names: Cofactor
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds Mg(2+) or Mn(2+).
messages: Cytoplasm
messages: Expressed in seeds, leaves and flower buds.
messages: Expressed in siliques from 0 to 10 days after fertilization (DAF). Levels decrease at 13 DAF and disappear at 16 DAF. Expressed early in seed germination from 6 hours to 48 hours after seed imbibition.
messages: Homodimer; disulfide-linked.
messages: Nucleus
messages: Ribonuclease that cleaves double-stranded RNA (dsRNA). Required for 3'-external transcribed spacer (ETS) cleavage of the pre-rRNA precursors. May promote the production of 21 nucleotide small interfering RNA (siRNA) during post-transcriptional gene silencing (PTGS).

3702:AT2G35600
gene id: 3702:AT2G35600
uniprot id: A0A178VQ67
uniprot id: O82281
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the BRX family.
messages: Expressed in roots.
messages: Heterodimer with BRXL1.
messages: May act as a regulator of cell proliferation and elongation in the root.
messages: No visible phenotype.
messages: Nucleus
messages: Overexpression of BRXL1 can rescue the short root phenotype. However, it does not act redundantly with BRX in vivo, presumably due to a much lower level of expression.

3702:AT4G10060
gene id: 3702:AT4G10060
uniprot id: F4JLJ2
names: Function
names: Similarity
messages: Belongs to the non-lysosomal glucosylceramidase family.
messages: Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.

3702:AT4G38440
gene id: 3702:AT4G38440
uniprot id: A0A654FWY4
uniprot id: Q8GYU3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RPAP1 family.
messages: Cytoplasm
messages: Expressed in root and shoot apices and in leaf and flower primordia. Detected in the endosperm, embryo, meristems and in organ primordia, but not in mature cells. Found exclusively in the vascular bundles in mature leaves.
messages: Interacts with HAG3, NRPB3 and NRPB10L.
messages: No visible phenotype when heterozygous. Embryo lethal when homozygous.
messages: Nucleus
messages: Over-expression of IYO activates premature cell differentiation and confers resistance to the elongation inhibitor 6-azauracil.
messages: Positive regulator of transcriptional elongation that is essential for cells to initiate differentiation. Interacts with RNA polymerase II and the Elongator complex and is required to sustain global levels of transcriptional elongation activity, specifically in differentiating tissues.

3702:AT4G28811
gene id: 3702:AT4G28811
uniprot id: Q8GT73
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT4G35670
gene id: 3702:AT4G35670
uniprot id: A0A178UV87
uniprot id: A0A1P8B557
uniprot id: F4JN47
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT3G07840
gene id: 3702:AT3G07840
uniprot id: Q9SFD0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G08210
gene id: 3702:AT4G08210
uniprot id: Q9SUF9
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G10588
gene id: 3702:AT1G10588
uniprot id: A0A178WI21
uniprot id: Q1G2Y4
uniprot id: Q1G361
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GASA family.
messages: Secreted

3702:AT5G50380
gene id: 3702:AT5G50380
uniprot id: A0A178UQK7
uniprot id: F4K8Y6
names: Function
names: Similarity
messages: Belongs to the EXO70 family.
messages: Component of the exocyst complex.

3702:AT1G11000
gene id: 3702:AT1G11000
uniprot id: A0A1P8APG9
uniprot id: A0A5S9TTS0
uniprot id: O23693
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT3G29630
gene id: 3702:AT3G29630
uniprot id: Q9LJA6
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT2G07560
gene id: 3702:AT2G07560
uniprot id: Q9SH76
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Binds to 14-3-3 proteins. The binding is induced by phosphorylation of Thr-948. Binding to 14-3-3 proteins activates the H(+)-ATPase (By similarity).
messages: Membrane
messages: The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity).

3702:AT3G29200
gene id: 3702:AT3G29200
uniprot id: A0A178VAF2
uniprot id: P42738
names: Activity Regulation
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Allosterically inhibited by tyrosine and phenylalanine. Activated by tryptophan.
messages: By wounding, P.syringae, bacterial elicitor and the fungal pathogens F.oxysporum and A.raphani.
messages: Expressed in roots, shoots, rosette leaves, stems, cauline leaves, flowers and siliques.
messages: Homodimer.
messages: May play a role in chloroplast biogenesis.
messages: chloroplast

3702:AT1G58410
gene id: 3702:AT1G58410
uniprot id: Q9C646
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Potential disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT5G50580
gene id: 3702:AT5G50580
uniprot id: P0DI12
uniprot id: P0DI13
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin-activating E1 family.
messages: Heterodimer of SAE1A or SAE1B and SAE2. The complex binds SUMO proteins via SAE2 (By similarity).
messages: Nucleus
messages: The dimeric enzyme acts as an E1 ligase for SUMO1 and SUMO2. It mediates ATP-dependent activation of SUMO proteins and formation of a thioester with a conserved cysteine residue on SAE2. Functionally redundant with its paralog SAE1A (By similarity).
messages: The dimeric enzyme acts as an E1 ligase for SUMO1 and SUMO2. It mediates ATP-dependent activation of SUMO proteins and formation of a thioester with a conserved cysteine residue on SAE2. Functionally redundant with its paralog SAE1A.

3702:AT3G52780
gene id: 3702:AT3G52780
uniprot id: A0A7G2EQQ9
uniprot id: Q9LXI7
names: Cofactor
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed flowers and siliques.
messages: Homodimer.
messages: May be due to a competing donor splice site.
messages: Secreted

3702:AT5G26580
gene id: 3702:AT5G26580
uniprot id: Q7X9H2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G40700
gene id: 3702:AT2G40700
uniprot id: A0A2H1ZE38
names: Domain
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: RNA helicase.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT5G02960
gene id: 3702:AT5G02960
uniprot id: A0A178UNB4
uniprot id: P49201
names: Similarity
messages: Belongs to the universal ribosomal protein uS12 family.

3702:AT1G80010
gene id: 3702:AT1G80010
uniprot id: A0A178W116
uniprot id: Q9S793
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT3G18930
gene id: 3702:AT3G18930
uniprot id: Q67YI6
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G26300
gene id: 3702:AT4G26300
uniprot id: A0A1P8B7W2
uniprot id: A0A1P8B7W5
uniprot id: A0A1P8B7W8
uniprot id: A0A384KS52
uniprot id: A0A654FSX8
uniprot id: O23247
uniprot id: Q7DLG4
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Embryo defective. Developmental arrest of the embryo at the globular stage.
messages: Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT3G03220
gene id: 3702:AT3G03220
uniprot id: A0A654F8W3
uniprot id: Q9M9P0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Membrane
messages: cell wall

3702:AT3G47800
gene id: 3702:AT3G47800
uniprot id: Q9STT3
names: Similarity
messages: Belongs to the aldose epimerase family.

3702:AT5G25390
gene id: 3702:AT5G25390
uniprot id: A0A178USD7
uniprot id: Q3E958
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By wounding in cauline leaves, stems, and siliques, but not in rosette leaves.
messages: Found in all organs, mostly in veins, epidermis and trichome bases. Specific expression in lateral root tips.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G08300
gene id: 3702:AT5G08300
uniprot id: A0A178U834
uniprot id: P68209
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Heterodimer of an alpha and a beta subunit.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: Mitochondrion
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.

3702:AT2G14960
gene id: 3702:AT2G14960
uniprot id: O82333
names: Function
names: Induction
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: By auxin.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.

3702:AT1G77590
gene id: 3702:AT1G77590
uniprot id: Q9CAP8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses palmitate, palmitoleate, oleate and linoleate.
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Highly expressed in developing seeds and young rosette leaves.
messages: Reduced amount long-chain fatty acid (LCFA).
messages: chloroplast envelope

3702:AT1G75370
gene id: 3702:AT1G75370
uniprot id: Q8GXC6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity).

3702:AT2G23148
gene id: 3702:AT2G23148
uniprot id: B3H4B5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G36925
gene id: 3702:AT5G36925
uniprot id: Q9FIW0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (By similarity). Inhibits the fungal growth of Alternaria brassicicola, Sclerotinia sclerotiorum, Fusarium graminearum, yeast (Saccharomyces) and Botrytis cinerea, thus being an antimicrobial peptide (AMP) (PubMed:25593351). Promotes resistance to A.brassicicola and B.cinerea (PubMed:25593351).
messages: Cell membrane
messages: Endoplasmic reticulum
messages: Induced by increased levels of photorespiratory hydrogen peroxide H(2)O(2) (PubMed:21443605). Transiently up-regulated by cold stress but down-regulated by heat stress (PubMed:25593351). Induced by the necrotrophic fungus Botrytis cinerea in systemically infected leaves (PubMed:25593351). Accumulates in response to salicylic acid (SA, benzothiadiazole (BTH)) and jasmonic acid (MeJA) (PubMed:25593351).
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mainly expressed in young developing leaves, hydathodes, immature flowers and elongating pollen tubes.
messages: apoplast

3702:AT4G30660
gene id: 3702:AT4G30660
uniprot id: A0A178UYE9
uniprot id: Q9SUI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0057 (PMP3) family.
messages: Membrane

3702:AT4G29630
gene id: 3702:AT4G29630
uniprot id: Q9S847
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

3702:AT4G29100
gene id: 3702:AT4G29100
uniprot id: A0A178V0M1
uniprot id: A0A1P8B4W7
uniprot id: Q8S3D1
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT4G29060
gene id: 3702:AT4G29060
uniprot id: Q9SZD6
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Associates transiently with chloroplast polysomes.
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP (By similarity). It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity).
messages: Belongs to the EF-Ts family.
messages: Binds to psbD and psbA 5'-untranslated regions (UTRs) in vitro.
messages: Component of the chloroplast ribosome 30S and 70S subunits, as well as polysomes.
messages: Component of the chloroplast ribosome 70S subunit, and at low levels, present in polysomes.
messages: Defective embryo arrested at globular stage.
messages: Probable substrate for the chloroplast protease ClpP6.
messages: chloroplast

3702:AT3G28610
gene id: 3702:AT3G28610
uniprot id: Q9LJJ5
names: Induction
names: Similarity
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Induced in roots by salt stress.

3702:AT3G55710
gene id: 3702:AT3G55710
uniprot id: Q9M051
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT2G32520
gene id: 3702:AT2G32520
uniprot id: A0A178VSK1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35670
gene id: 3702:AT2G35670
uniprot id: P0DKJ8
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the VEFS (VRN2-EMF2-FIS2-SU(Z)12) family.
messages: Expressed maternally and zygotically. Expressed in the central cell before fertilization, and in the endosperm after fertilization, then decreases before the time of endosperm cellularization but continues in the chalazal cyst.
messages: In cv. Landsberg erecta (AC P0DKJ7), the sequence differs from that shown due to an insertion in the genomic sequence that adds 60 residues after the Asn-564.
messages: Nucleus
messages: Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Required to prevent the proliferation of the central cell by repressing unknown target genes before fertilization. Regulates the anteroposterior organization of the endosperm.
messages: Probably indirectly associated with FIE and/or MEA. In plants, PcG complexes are probably composed of a member of the EZ family (CLF or MEA), FIE, and a member of the VEFS family (FIS2, VRN2 or EMF2).
messages: Weakly expressed. Expressed in late siliques.

3702:AT5G50230
gene id: 3702:AT5G50230
uniprot id: Q6NNP0
names: Function
names: Similarity
messages: Belongs to the WD repeat ATG16 family.
messages: May play a role in autophagy.

3702:AT1G53720
gene id: 3702:AT1G53720
uniprot id: A0A1P8AQN8
uniprot id: Q6Q151
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Belongs to the cyclophilin-type PPIase family. PPIL4 subfamily.
messages: Component of the BZR1 complex. Interacts with NRPB1 (via CTD domain), SCL28, SCL30, SCL30A, SCL33, SC35, SR30, SR34, RSZ21, RS2Z33, RS31 and RS40.
messages: Nucleus
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Influences somehow regulation of RNA pol II (CTD) phosphorylation. Binds RNA with preferences for GC-rich sequences. Probably involved in activities connecting transcription and pre-mRNA processing. Involved in brassinostroid response.
messages: Ubiquitous.

3702:AT3G53240
gene id: 3702:AT3G53240
uniprot id: F4J9A8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT4G00030
gene id: 3702:AT4G00030
uniprot id: A0A178UXU7
uniprot id: O81304
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAP/fibrillin family.
messages: chloroplast thylakoid

3702:AT3G24520
gene id: 3702:AT3G24520
uniprot id: A0A654FC90
uniprot id: Q9LV52
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class C subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT2G24220
gene id: 3702:AT2G24220
uniprot id: A0A178VV71
uniprot id: A0A2H1ZE27
uniprot id: A0A654F0P9
uniprot id: Q9ZUH3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT4G34280
gene id: 3702:AT4G34280
uniprot id: Q8GYY7
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates in response to ultraviolet-B (UV-B) illumination.
messages: Hypersensitivity to ultraviolet-B (UV-B) illumination leading to short hypocotyls under UV-B; the sensitivity to UV-B is alleviated by the disruption of UVR8 and requires the presence of COP1 and HY5 (PubMed:25193399, PubMed:28735869). The double mutants dhu1-1 cop1-6 and dhu1-1 hy5-215 phenotypes resemble that of single mutants cop1-6 and hy5-215, respectively (PubMed:28735869). The UV-B responsiveness of the double mutant dhu1-1 rup1-1 is similar to that of the single mutants dhu1-1 and rup1-1 (PubMed:28735869).
messages: Interacts directly with DDB1A (PubMed:25193399). Binds to COP1 and RUP1 (PubMed:28735869).
messages: May act as a substrate receptor of a CUL4-RING E3 ubiquitin-protein ligase (CRL4) complex involved in the negative regulation of cellular responses to ultraviolet-B (UV-B) illumination, likely in coordination with RUP1 (PubMed:25193399, PubMed:28735869). Interacts with COP1 and probably prevents the formation of active UVR8-COP1 complex, thus avoiding UVR8-COP1-mediated positive regulation of UV-B responses (PubMed:28735869).
messages: Nucleus

3702:AT5G02190
gene id: 3702:AT5G02190
uniprot id: Q9LZL3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase A1 family.
messages: Ectopic expression of PCS1 induces survival of cells of the anther wall including stomium and septum cells. This leads to a failure in anther dehiscence and subsequent male sterility (PubMed:15723040).
messages: Embryo-specific aspartic protease that limits programmed cell death during reproductive development. Possesses peptidase activity toward casein in vitro.
messages: Embryonic lethality when homozygous.
messages: Endoplasmic reticulum
messages: Expressed specifically in developing gametophytes and developing seeds.

3702:AT2G45910
gene id: 3702:AT2G45910
uniprot id: A0A5S9X7C1
uniprot id: Q8GUH1
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G75500
gene id: 3702:AT1G75500
uniprot id: A0A178WFC0
uniprot id: Q94AP3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: In stems, defect in cell elongation resulting in dwarf and bushy plants with altered mechanical properties, as well as little to no secondary cell walls in fibers, including xylary and interfascicular fibers; these symptoms are partly reversed by continuous light conditions. At the flowering stage, red, dry and bent downwards stem apices. General repression of indole metabolism, including tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid). Broad-spectrum resistance to vascular pathogens, including the bacteria Ralstonia solanacearum and Xanthomonas campestris pv. campestris, and the fungi Verticillium dahliae and Verticillium albo-atrum in a salicylic-acid- (SA-) dependent manner. SA accumulation in roots.
messages: Membrane
messages: Mostly expressed in stems and hypocotyls, also present in seedlings, root, leaves, flowers and siliques. Ubiquitous, mostly expressed in vascular tissues and secondary wall-forming cells, including developing xylem vessels and fibers.
messages: Required for secondary wall formation in fibers, especially in short days conditions. Promotes indole metabolism and transport (e.g. tryptophan, neoglucobrassicin and auxin (indole-3-acetic acid)). May prevent salicylic-acid (SA) accumulation.
messages: Vacuole membrane

3702:AT1G74090
gene id: 3702:AT1G74090
uniprot id: A0A654ENT6
uniprot id: Q9C9C9
uniprot id: T1P4U2
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Polymorphism
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Expressed in roots, leaves and stems. Barely detected in siliques and flowers.
messages: In cv. C24, the substrate preference is restricted to a small number of desulfo-gulcosinolates: desulfo-6-methylthiohexyl glucosinolate > desulfo-benzyl glucosinolate > desulfo-2-phenylethyl glucosinolate (PubMed:16367753).
messages: Inhibited by phosphoadenosine 5'-phosphate (PAP).
messages: Low expression in young plants (up to 4 weeks), then slight increase in older plants.
messages: Not induced by coronatine, methyl jasmonate or high sulfate concentration.
messages: Strong differences in the kinetic behavior between the same protein from different cultivars.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of desulfo-glucosinolates (dsGSs), the final step in the biosynthesis of the glucosinolate core structure. Preferred substrate are the long-chain desulfo-glucosinolates, 7-methylthioheptyl and 8-methylthiooctyl, derived from methionine. Substrate preference is desulfo-benzyl glucosinolate > desulfo-4-methylthiobutyl glucosinolate > desulfo-6-methylthiohexyl glucosinolate > desulfo-3-methylthiopropyl glucosinolate > desulfo-indol-3-yl methyl glucosinolate > desulfo-singrin > desulfo-3-butenyl glucosinolate.

3702:AT2G17370
gene id: 3702:AT2G17370
uniprot id: A0A178VRN5
uniprot id: P43256
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HMG-CoA reductase family.
messages: Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: No visible phenotype under normal growth conditions, but 25% lower levels in triterpenoids content and 15% lower levels in sterol content. Hmg1 and hmg2 double mutants are lethal during male gametophyte development.
messages: Not regulated by myriocin, squalestatin or terbinafine.
messages: Regulated at the post-translational level in response to alterations of the sphingolipid and the sterol biosynthetic pathways.
messages: Restricted to young seedlings, roots, and inflorescences. Expressed in root tips, shoot apex, secretory zone of the stigma, microspores, mature pollen grains, gynoecium vascular tissue and fertilized ovules.

3702:AT5G13960
gene id: 3702:AT5G13960
uniprot id: A0A1P8BH29
uniprot id: A0A654G0S6
uniprot id: Q8GZB6
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although the SET domain contains the active site of enzymatic activity, both pre-SET and post-SET domains are required for methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Chromosome
messages: Expressed in leaves stems and flowers.
messages: Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression. The silencing mechanism via DNA CpNpG methylation requires the targeting of chromomethylase CMT3 to methylated histones, probably through an interaction with an HP1-like adapter. By its function, KYP is directly required for the maintenance of the DNA CpNpG and asymmetric methylation. Involved in the silencing of transposable elements.
messages: In the pre-SET domain, Cys residues bind 3 zinc ions that are arranged in a triangular cluster; some of these Cys residues contribute to the binding of two zinc ions within the cluster.
messages: Interacts with H3 histone.
messages: Mutations in the KYP/SUVH4 gene decrease the level of histone H3-K9 dimethylated, trimethylated or dimethylated in association with H3-K14Ac by factors of 4,3 and 3, respectively. The level of monomethylated H3-K9 is unchanged. Such mutations lead to a drastic decrease of cytosine methylation at CpNpG sites, causing the reactivation of endogenous retrotransposons. The KRYPTONYTE methyltransferase name was given according to its involvement in SUPERMAN gene silencing.
messages: Nucleus
messages: centromere

3702:AT2G39830
gene id: 3702:AT2G39830
uniprot id: Q0WSN2
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Subunit
names: Tissue Specificity
messages: Acts redundantly with DA1 and DAR1 to regulate endoreduplication during leaf development. Together with DA1 and DAR1, modulates the protein stability of the transcription factors TCP14 and TCP15, which repress endoreduplication by directly regulating the expression of cell-cycle genes (PubMed:25757472). Involved in root phloem development. Is an essential component of early phloem development, long-distance delivery of phloem content, and proper maintenance of root system architecture (PubMed:21749503). Involved in the control of root meristem size. Functions genetically downstream of cytokinin and IAA3 to maintain normal auxin distribution by influencing polar auxin transport. Acts through the PLETHORA pathway, upstream of PLT1 and PLT2 to influence root stem cell niche activity and thus control root meristem size (PubMed:23296689).
messages: Exogenous treatment with auxin rescues the phloem defects of the lrd3 knockout mutant.
messages: Expressed in the vasculature of leaves, inflorescence stems, flowers, hypocotyls, and primary and lateral roots. In roots, expressed in phloem companion cells.
messages: Highly expressed during early stages leaf development, and expression decreases at the later stages of leaf development.
messages: Interacts with ubiquitin, TCP14 and TCP15.
messages: Polyubiquitinated by DA2.
messages: Reduced primary root growth, increased lateral root formation, and altered root system architecture, due to altered early phloem development.
messages: The UIM domains bind molecules modified by monoubiquitin or ubiquitin chains and promote coupled monoubiquitination.

3702:AT2G46670
gene id: 3702:AT2G46670
uniprot id: C0SV91
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G46640
gene id: 3702:AT2G46640
uniprot id: A0A1P8AYC0
uniprot id: F4IJ79
uniprot id: F4IJ80
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the TAC family.
messages: Erect inflorescence stem growth.
messages: Expressed in shoots, vasculature, endodermis, petioles, shoot apical meristem, inflorescence stems, pedicels, styles and anther filaments.
messages: Involved in the regulation of inflorescence branch growth angle (PubMed:23663106). Promotes horizontal inflorescence branch growth (PubMed:23663106).

3702:AT4G01100
gene id: 3702:AT4G01100
uniprot id: A0A178UTF8
uniprot id: A0A1P8B4I5
uniprot id: F4JHS4
uniprot id: O04619
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Expressed in seedling radicles and roots, vasculature of cotyledons, leaf primordia, leaves and sepals.
messages: Inhibited by pyridoxal 5-phosphate, bathophenanthroline, mersalyl, p-hydroxymercuribenzoate and tannic acid.
messages: Membrane
messages: Mitochondrial adenylate carrier that catalyzes specifically the transport of ATP, ADP and AMP by a counter-exchange mechanism across the inner mitochondrial membrane. Substrate preference in reconstituted proteoliposomes is ATP > AMP > ADP. May play a role in oxidative phosphorylation and be important for the provision of energy required to support growth in heterotrophic tissues.
messages: Mitochondrion inner membrane
messages: Reduced root growth and respiration.

3702:AT4G19370
gene id: 3702:AT4G19370
uniprot id: A0A178USN0
uniprot id: O65708
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Cell membrane
messages: Membrane
messages: No visible phenotype. Double mutants lacking both MWL1 and MWL2 exhibit smaller rosettes with a decrease in rosette fresh weight and stem height associated with a reduction in total lignin content and an increase in syringyl/guaiacyl (S/G) monomer ratio.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Together with MWL1, contributes to secondary cell wall biology, specifically lignin biosynthesis.

3702:AT1G14685
gene id: 3702:AT1G14685
uniprot id: A0A178W364
uniprot id: Q9LDE2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the BBR/BPC family.
messages: Expressed in seedlings, leaves and pistils. Detected in the base of flowers and tips of carpels, in sepal and petal vasculature, in pollen grains, in young rosette, in the lateral and tip of primary roots, and in ovule at the exception of the outer integument.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.

3702:AT4G24100
gene id: 3702:AT4G24100
uniprot id: A0A178V4P7
uniprot id: A0A1P8B4A5
uniprot id: A0A1P8B4B2
uniprot id: A0A1P8B4B7
uniprot id: A0A654FS83
uniprot id: Q8RWU9
names: Caution
names: Similarity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G29260
gene id: 3702:AT3G29260
uniprot id: F4J300
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT1G78440
gene id: 3702:AT1G78440
uniprot id: A0A5S9WVJ6
uniprot id: Q8LEA2
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By gibberellin A3 (GA3). Not regulated by auxin.
messages: Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Converts GA9/GA20 to GA51/GA29 and GA4/GA1 to GA34/GA8.
messages: Preferentially expressed in flowers, siliques, and upper stems. Not expressed in the apex.

3702:AT4G38600
gene id: 3702:AT4G38600
uniprot id: B3H700
uniprot id: Q6WWW4
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the UPL family. K-HECT subfamily.
messages: E3 ubiquitin-protein ligase which mediates ubiquitination.
messages: Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes.
messages: Widely expressed.

3702:AT5G10310
gene id: 3702:AT5G10310
uniprot id: A0A178UHQ6
uniprot id: A0A1P8BBV7
uniprot id: Q9LFT5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Controls stomatal patterning.
messages: Secreted

3702:AT5G64300
gene id: 3702:AT5G64300
uniprot id: A0A178UCT4
uniprot id: P47924
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 divalent metal cations per subunit. Magnesium or manganese.
messages: Expressed in leaves, shoots, roots, flowers and siliques.
messages: In the C-terminal section; belongs to the GTP cyclohydrolase II family.
messages: In the N-terminal section; belongs to the DHBP synthase family.
messages: Involved in riboflavin biosynthesis. Catalyzes both the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate and the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate. RIBA2 and RIBA3 together are not able to complement the loss of function of RIBA1.
messages: No visible phenotype when heterozygous. Bleached phenotype and no viable seeds produced when homozygous.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT2G42725
gene id: 3702:AT2G42725
uniprot id: A0A1P8AZ37
uniprot id: A0A654FBW9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G15310
gene id: 3702:AT1G15310
uniprot id: A0A654EBM1
uniprot id: P37106
uniprot id: Q56XJ0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Component of a signal recognition particle (SRP) complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). As part of the SRP complex, associates with the SRP receptor (SR) component SRPRA to target secretory proteins to the endoplasmic reticulum membrane. Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes. Displays basal GTPase activity, and stimulates reciprocal GTPase activation of the SR subunit SRPRA. Forms a guanosine 5'-triphosphate (GTP)-dependent complex with the SR subunit SRPRA. SR compaction and GTPase mediated rearrangement of SR drive SRP-mediated cotranslational protein translocation into the ER (By similarity). Requires the presence of SRP9/SRP14 and/or SRP19 to stably interact with RNA (By similarity).
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). As part of the SRP complex, associates with the SRP receptor (SR) component SRPRA to target secretory proteins to the endoplasmic reticulum membrane. Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes. Displays basal GTPase activity, and stimulates reciprocal GTPase activation of the SR subunit SRPRA. Forms a guanosine 5'-triphosphate (GTP)-dependent complex with the SR subunit SRPRA. SR compaction and GTPase mediated rearrangement of SR drive SRP-mediated cotranslational protein translocation into the ER (By similarity). Requires the presence of SRP9/SRP14 and/or SRP19 to stably interact with RNA.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). As part of the SRP complex, associates with the SRP receptor (SR) component SRPRA to target secretory proteins to the endoplasmic reticulum membrane. Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes. Displays basal GTPase activity, and stimulates reciprocal GTPase activation of the SR subunit SRPRA. Forms a guanosine 5'-triphosphate (GTP)-dependent complex with the SR subunit SRPRA. SR compaction and GTPase mediated rearrangement of SR drive SRP-mediated cotranslational protein translocation into the ER. Requires the presence of SRP9/SRP14 and/or SRP19 to stably interact with RNA.
messages: Cytoplasm
messages: Endoplasmic reticulum
messages: The M domain binds the 7SL RNA in presence of SRP19 and binds the signal sequence of presecretory proteins.
messages: The NG domain, also named G domain, is a special guanosine triphosphatase (GTPase) domain, which binds GTP and forms a guanosine 5'-triphosphate (GTP)-dependent complex with a homologous NG domain in the SRP receptor subunit SRPRA. The two NG domains undergo cooperative rearrangements upon their assembly, which culminate in the reciprocal activation of the GTPase activity of one another. SRP receptor compaction upon binding with cargo-loaded SRP and GTPase rearrangement drive SRP-mediated cotranslational protein translocation into the ER.

3702:AT5G47530
gene id: 3702:AT5G47530
uniprot id: A0A178USN6
uniprot id: Q9FGK4
names: Caution
names: Cofactor
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: DOMON domain could bind catecholamines and thereby could regulate the cytochrome b561 domain function (PubMed:15022831). DOMON domain could bind one heme b (PubMed:19386804).
messages: May act as a catecholamine-responsive trans-membrane electron transporter.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02520
gene id: 3702:AT3G02520
uniprot id: A0A178VJ06
uniprot id: Q96300
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: Component of the SERK1 signaling complex, composed of KAPP, CDC48A, GRF6 or GRF7, SERK1, SERK2, SERK3/BAK1 and BRI1 (PubMed:16473966). Interacts with DREB1A and DREB1B in the nucleus (PubMed:28344081). Interacts with CINV1 (PubMed:25256212).
messages: Cytoplasm
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
messages: Nucleus

3702:AT3G45640
gene id: 3702:AT3G45640
uniprot id: A0A384L050
uniprot id: Q0WVS7
uniprot id: Q39023
names: Activity Regulation
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by threonine and tyrosine phosphorylation.
messages: Activated by threonine and tyrosine phosphorylation. Activated by MAP kinase kinases MKK4, MKK5, MKK7 and MKK9. Activated in response to hydrogen peroxide, ozone, salt stress and flagellin bacterial elicitor. Triggered by Agrobacterium upon T-DNA transfer. Repressed by DSPTP1B/MKP2-mediated dephosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: By touch, cold, salinity stress and ozone.
messages: Copolarizes with BASL, YDA and MPK6 in stomatal asymmetric cell division (ACD) cells.
messages: Cytoplasm
messages: Dually phosphorylated on Thr-196 and Tyr-198, which activates the enzyme (By similarity). Dephosphorylated by DSPTP1B/MKP2.
messages: Interacts with DSPTP1B/MKP2, NDPK2 and VIP1. The interaction with DSPTP1B/MKP2 is repressed by fungal elicitation (PubMed:12506203, PubMed:17947581, PubMed:20626661). Binds to LIP5 (PubMed:25010425). Interacts with VQ4 (PubMed:24750137). Interacts with RACK1A, RACK1B and RACK1C (PubMed:25731164). Interacts with FLZ9 (Ref.28). Interacts with MKK5 (PubMed:27913741).
messages: Involved in oxidative stress-mediated signaling cascade (such as ozone). Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. May be involved in hypersensitive response (HR)-mediated signaling cascade by modulating LIP5 phosphorylation and subsequent multivesicular bodies (MVBs) trafficking. May phosphorylate regulators of WRKY transcription factors. Mediates the phosphorylation of VIP1 and subsequent stress genes transcription in response to Agrobacterium. MKK9-MPK3/MPK6 module phosphorylates and activates EIN3, leading to the promotion of EIN3-mediated transcription in ethylene signaling. MPK3/MPK6 cascade regulates camalexin synthesis through transcriptional regulation of the biosynthetic genes after pathogen infection. YDA-MKK4/MKK5-MPK3/MPK6 module regulates stomatal cell fate before the guard mother cell (GMC) is specified. When activated, reinforces the feedback loop by phosphorylating BASL, and inhibits stomatal fate by phosphorylating SPCH (PubMed:25843888). This MAPK cascade also functions downstream of the ER receptor in regulating coordinated local cell proliferation, which shapes the morphology of plant organs.
messages: Nucleus
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.
messages: cell cortex

3702:AT5G67400
gene id: 3702:AT5G67400
uniprot id: A0A7G2FL54
uniprot id: A3KPG1
uniprot id: Q43873
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Expressed in the whole plant, with the highest expression in roots.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated transiently by a cold treatment.
messages: Vacuole

3702:AT5G17870
gene id: 3702:AT5G17870
uniprot id: Q9FKP0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chloroplast-specific ribosomal protein cL38 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT4G21770
gene id: 3702:AT4G21770
uniprot id: Q9SVS0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pseudouridine synthase RluA family.
messages: chloroplast

3702:AT5G04870
gene id: 3702:AT5G04870
uniprot id: Q06850
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Interacts with 14-3-3 proteins.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger. Phosphorylates the Ca(2+)-ATPase ACA2 resulting in the inhibition of its calcium activation.
messages: Peroxisome membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (414-444) inactivates kinase activity under calcium-free conditions.

3702:AT5G47120
gene id: 3702:AT5G47120
uniprot id: Q9LD45
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the BI1 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in root tips, root vasculature, flower tissues, including stamens and sepals, and in the base of siliques. Not detected in mature leaves.
messages: Interacts (via C-terminus) with calmodulin, CYTB5-B and CYTB5-D. Interacts indirectly with FAH1 via CYTB5-D.
messages: No visible phenotype under normal growth conditions. Accelerated methyl jasmonate-induced leaf senescence. Enhanced sensitivity to water stress, heat shock, toxin, tunicamycin and pathogens.
messages: Suppressor of apoptosis. Modulator of endoplasmic reticulum stress-mediated programmed cell death. Involved in methyl jasmonate-induced leaf senescence through regulating cytoplasmic calcium level.
messages: Up-regulated by water stress, heat-shock, mycotoxin and pathogens.

3702:AT1G64060
gene id: 3702:AT1G64060
uniprot id: A0A5S9WRV6
uniprot id: O48538
names: Activity Regulation
names: Caution
names: Function
names: Induction
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RBOH (TC 5.B.1.3) family.
messages: Calcium-dependent NADPH oxidase that generates superoxide. Generates reactive oxygen species (ROS) during incompatible interactions with pathogens and is important in the regulation of the hypersensitive response (HR). Involved in abscisic acid-induced stomatal closing and in UV-B and abscisic acid ROS-dependent signaling.
messages: Cell membrane
messages: Expressed in roots, stems, seedlings, inflorescences, leaves and guard cells.
messages: Inhibited by diphenylene iodonium (DPI).
messages: Intron retention.
messages: Membrane
messages: Monomer and homodimer (By similarity). Interacts (via N-terminus) with CIPK26 (PubMed:23335733). Interacts (via N-terminus) with SRC2 (PubMed:23872431).
messages: Not glycosylated. Phosphorylated by CIPK26.
messages: Up-regulated by abscisic acid.
messages: Was originally called RBOHA.

3702:AT3G50740
gene id: 3702:AT3G50740
uniprot id: Q94A84
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Expressed in seedlings, roots and leaves.
messages: Interacts with SIS8.
messages: No visible phenotype under normal growth conditions, but mutant plants display a sugar-resistant seedling development phenotype.
messages: Nucleus
messages: UDP-glycosyltransferase that glucosylates coniferyl aldehyde to form coniferyl aldehyde 4-O-glucoside (PubMed:15907484). Glucosylates sinapyl aldehyde to form sinapyl aldehyde 4-O-glucoside (PubMed:15907484). Is not active in presence of coniferyl alcohol or sinapyl alcohol (PubMed:15907484). Can glucosylate the phytotoxic xenobiotic compound 2,4,5-trichlorophenol (TCP) (PubMed:15907484).

3702:AT4G30825
gene id: 3702:AT4G30825
uniprot id: A0A178URL4
uniprot id: O65567
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G59710
gene id: 3702:AT1G59710
uniprot id: A0A384L969
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G44840
gene id: 3702:AT5G44840
uniprot id: F4KBP8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT3G25020
gene id: 3702:AT3G25020
uniprot id: Q9LJS0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Impaired perception of fungal endopolygalacturonases (e.g. BcPG3) leading to absence of necrosis upon B.cinerea BcPG3, BcPG2, BcPG4, and BcPG6 or A.niger AnPGB treatments.
messages: Interacts with BcPG3.
messages: Recognizes fungal (e.g. B.cinerea and A.niger) endopolygalacturonases (PGs, e.g. BcPG3, BcPG2, BcPG4, BcPG6 and AnPGB) and acts as a microbe-associated molecular pattern (MAMP) receptor to mediate defense response against fungi (e.g. B.cinerea) and oomycetes (e.g. H.arabidopsidis). Functionality seems to depend on the presence of the receptor kinase SOBIR1 as an adapter protein.

3702:AT3G22050
gene id: 3702:AT3G22050
uniprot id: Q9LRK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G48510
gene id: 3702:AT1G48510
uniprot id: A0A1P8ASC1
uniprot id: A0A1P8ASC2
uniprot id: A0A654EGT7
uniprot id: F4HYG9
uniprot id: Q9LP74
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SURF1 (TC 3.D.4.8) family.
messages: Belongs to the SURF1 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May be involved in the biogenesis of the COX complex.
messages: Mitochondrion inner membrane
messages: Probably involved in the biogenesis of the COX complex.

3702:AT5G09450
gene id: 3702:AT5G09450
uniprot id: Q94B59
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G50500
gene id: 3702:AT3G50500
uniprot id: A0A178VHA9
uniprot id: F4J0N1
uniprot id: Q39192
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By abscisic acid (ABA), salt, and osmotic stress (at protein level).
messages: Expressed in seeds, seedlings, roots (especially in tips), stems, leaves, shoots, flowers and siliques.
messages: Interacts with ABI1 (PubMed:19874541). Interacts with I-2, TOPP1 and TOPP2 (PubMed:26943172). Interacts with FREE1 (via C-terminus) (PubMed:30962512).
messages: Together with SRK2I, key component and activator of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as seed germination, Pro accumulation, root growth inhibition, dormancy and seedling growth, and, to a lesser extent, stomatal closure (PubMed:17307925). In response to ABA, phosphorylates the ESCRT-I complex component FREE1, which is required for ABA-induced FREE1 nuclear import (PubMed:30962512).

3702:AT4G15400
gene id: 3702:AT4G15400
uniprot id: O23393
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in response to brassinosteroids (BR) treatment (PubMed:22956280, PubMed:22544867). Induced by darkness in roots (PubMed:22544867).
messages: Belongs to the plant acyltransferase family.
messages: Cytoplasm
messages: Monitors brassinosteroids (BR) responses and homeostasis, particularly in the root and hypocotyl in darkness (PubMed:22956280, PubMed:22544867). Promotes flavonoid biosynthesis (PubMed:22956280).
messages: Mostly expressed in roots (particularly in the root elongation zone), and, to a lower extent, in seedling, leaves (especially in hydathodes), siliques (e.g. in developing seeds) and flowers.

3702:AT4G15100
gene id: 3702:AT4G15100
uniprot id: O23364
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expression not detected.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT3G15340
gene id: 3702:AT3G15340
uniprot id: A0A178VC28
uniprot id: B3H4K7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant Proton pump-interactor protein family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Expressed in seedlings and flowers.
messages: May regulate plasma membrane ATPase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G63880
gene id: 3702:AT5G63880
uniprot id: Q8GXN6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF7 family.
messages: Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity).
messages: Component of the endosomal sorting required for transport complex III (ESCRT-III), composed at least of VPS2, VPS20, VPS24 and VPS32 (By similarity). Interacts with SKD1 (PubMed:20663085, PubMed:24812106).
messages: Endosome

3702:AT1G03550
gene id: 3702:AT1G03550
uniprot id: A0A1P8AMF6
uniprot id: A0A1P8AMG2
uniprot id: A0A1P8AMG5
uniprot id: A0A1P8AMH4
uniprot id: A0A1P8AMJ6
uniprot id: A0A1P8AMJ9
uniprot id: A0A654E7W3
uniprot id: Q9LR68
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SCAMP family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Probably involved in membrane trafficking.
messages: secretory vesicle membrane

3702:AT1G12920
gene id: 3702:AT1G12920
uniprot id: A0A178W3T8
uniprot id: Q9LPV8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic release factor 1 family.
messages: Cytoplasm
messages: Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (PubMed:15474304). Modulates plant growth and development (PubMed:16113224).
messages: Heterodimer of two subunits, one of which binds GTP.

3702:AT1G34390
gene id: 3702:AT1G34390
uniprot id: Q9C8N7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT1G64790
gene id: 3702:AT1G64790
uniprot id: F4I893
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
messages: Belongs to the GCN1 family.
messages: Involved in immunity against bacterial infection and in non-host resistance (PubMed:20360018). Required for embryo development (PubMed:17915010). Required for systemic acquired resistance, but functions in an salicylic acid-independent manner (PubMed:20360018). Required for bacterium-triggered stomatal closure response (PubMed:21998587).
messages: Not up-regulated by pathogen infection.
messages: Reduced growth, pale or yellow leaves, frequent enations and pollen defect resulting in sterility. Enhanced susceptibility to bacterial infection.
messages: This protein was called 'ILITYHIA' after the Greek goddess of childbirth.
messages: Unlike other GCN1 homologs, ILA is not a component of the MOS4-associated complex (MSC), a protein complex with homology to the nineteen complex (NTC) in yeast and human.

3702:AT2G35030
gene id: 3702:AT2G35030
uniprot id: A0A178VUD6
uniprot id: O64766
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G50520
gene id: 3702:AT1G50520
uniprot id: F4I6I6
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G22620
gene id: 3702:AT5G22620
uniprot id: Q9FNJ9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphoglycerate mutase family.
messages: Phosphoglycerate mutase-like protein lacking PGM activity, but having 2-carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase activity. Prevents the accumulation of D-glycero-2,3-pentodiulose-1,5-bisphosphate (PDBP) a potent inhibitor of ribulose-1,5-bisphosphate carboxylase (RuBisCO). PDBP is produced during the oxidation of ribulose-1,5-bisphosphate, the substrate of RuBisCO.
messages: chloroplast stroma

3702:AT1G26330
gene id: 3702:AT1G26330
uniprot id: F4IE61
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G08620
gene id: 3702:AT5G08620
uniprot id: A0A178U7J5
uniprot id: Q94C75
names: Domain
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: RNA helicase.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT2G38620
gene id: 3702:AT2G38620
uniprot id: A0A1P8B0A0
uniprot id: Q2V419
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Expressed in flowers.
messages: Interacts with CKS1.
messages: No apparent stomatal abnormalities. The double mutant cdkb1;1 cdkb1;2 has a reduced number of abnormal stomata consisting in single guard cells (GC) (PubMed:20675570). The quadruple mutant flp-1 myb88 cdkb1;1 cdkb1;2 has a reduced number of large single guard cells blocked at mitosis, with strongly altered shape and size and characterized by enlarged nucleus due to endomitosis and endocycling, as well as extensive chloroplast replication (PubMed:24123248).
messages: Together with CDKB1-1, promotes both the last division in the stomatal cell lineage as well as the number of stomata (PubMed:20675570). In collaboration with MYB124 and MYB88, restrict the G1/S transition and chloroplast and nuclear number during stomatal formation, and normally maintain fate and developmental progression throughout the stomatal cell lineage (PubMed:24123248).

3702:AT4G30170
gene id: 3702:AT4G30170
uniprot id: A0A178V0D0
uniprot id: Q96522
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: Slightly expressed in roots.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated transiently by a cold treatment. Induced by methyl jasmonate, a plant defense-related signaling molecule.
messages: Vacuole

3702:AT1G21280
gene id: 3702:AT1G21280
uniprot id: A0A178W671
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G64530
gene id: 3702:AT1G64530
uniprot id: Q8RWY4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: No visible phenotype.
messages: Nucleus
messages: Probable transcription factor.

3702:AT3G45680
gene id: 3702:AT3G45680
uniprot id: A0A654FD24
uniprot id: Q9M175
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in flowers, siliques and root epidermis or cortex. Detected in shoots.
messages: Membrane
messages: Transporter involved in a passive nitrate efflux.
messages: Up-regulated upon nematode infection.

3702:AT4G32200
gene id: 3702:AT4G32200
uniprot id: F4JTJ9
names: Function
names: Subcellular Location Annotation
messages: Chromosome
messages: Nucleus
messages: Required for normal meiosis.

3702:AT1G52820
gene id: 3702:AT1G52820
uniprot id: A0A654EHX8
uniprot id: Q9C936
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT1G70810
gene id: 3702:AT1G70810
uniprot id: Q9SSL1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus.
messages: Cell membrane
messages: Nucleus
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity).

3702:AT2G01080
gene id: 3702:AT2G01080
uniprot id: A0A178VWF6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G62390
gene id: 3702:AT5G62390
uniprot id: Q9LVA0
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Binds to the ATPase domain of HSP70/HSC70 chaperones (By similarity). Interacts with HSP70-11/BIP2.
messages: Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses. Necessary for the proper maintenance of the unfolded protein response (UPR) during heat and cold tolerance.
messages: Endoplasmic reticulum
messages: IQ domain mediates interaction with calmodulin.
messages: Susceptibility to heat and cold stress.

3702:AT3G62760
gene id: 3702:AT3G62760
uniprot id: A0A178V9A4
uniprot id: Q9LZI9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT2G28340
gene id: 3702:AT2G28340
uniprot id: Q9SKN6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT4G24920
gene id: 3702:AT4G24920
uniprot id: A0A178UWJ6
uniprot id: P0DI74
uniprot id: P0DI75
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Endoplasmic reticulum membrane
messages: Heterotrimeric complex composed of SEC61-alpha, SEC61-beta and SEC61-gamma.
messages: Membrane
messages: Necessary for protein translocation in the endoplasmic reticulum.

3702:AT4G32770
gene id: 3702:AT4G32770
uniprot id: Q94FY7
names: Function
names: Subcellular Location Annotation
messages: Involved in the synthesis of both tocopherols and tocotrienols (vitamin E), which presumably protect photosynthetic complexes from oxidative stress. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone and 2,3-dimethyl-5-phytyl-1,4-hydroquinone (DMPQ) to delta- and gamma-tocopherol respectively. Converts also 2,3-dimethyl-5-geranylgeranyl-1,4-hydroquinone (DMGQ) to gamma-tocotrienol.
messages: plastoglobule

3702:AT3G02050
gene id: 3702:AT3G02050
uniprot id: A0A654F3B5
uniprot id: Q9LD18
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: By potassium starvation.
messages: Cell membrane
messages: Detected at very low levels in roots, stems, leaves and flowers of mature plants and strongly expressed in the roots of potassium-starved plants.
messages: High-affinity potassium transporter.
messages: Membrane
messages: Potassium transporter.

3702:AT3G52210
gene id: 3702:AT3G52210
uniprot id: A0A178VDV9
uniprot id: Q5HZ60
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. mRNA cap 0 methyltransferase family.
messages: In the N-terminal section; belongs to the dsDNA virus mRNA guanylyltransferase family.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: mRNA capping methyltransferase that methylates the N7 position of the added guanosine to the 5'-cap structure of mRNAs. Binds RNA containing 5'-terminal GpppC (By similarity).

3702:AT1G30060
gene id: 3702:AT1G30060
uniprot id: A0A178WD50
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G07565
gene id: 3702:AT2G07565
uniprot id: A0A1P8B0A1
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G31020
gene id: 3702:AT1G31020
uniprot id: Q93VQ9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. Plant O-type subfamily.
messages: Mitochondrion
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. Possesses insulin disulfide bonds reducing activity. Reduced by thioredoxin reductases NTRA and NTRB.

3702:AT2G41940
gene id: 3702:AT2G41940
uniprot id: P93751
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Sequence Caution
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By gibberellin.
messages: Expressed in developing cauline leaves.
messages: Nucleus
messages: Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin and cytokinin. Is not involved in the regulation of trichome branching. Is functionally equivalent to GIS2 (PubMed:17507408). Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development (PubMed:24808098).
messages: Reduced trichome production on cauline leaves, stem branches and sepals.
messages: Seeds over-expressing ZFP8 show decreased sensitivity to inhibition of germination by abscisic acid (ABA).
messages: Sequencing errors.

3702:AT5G35960
gene id: 3702:AT5G35960
uniprot id: A0A1P8BFN3
uniprot id: Q9FGC3
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT2G17980
gene id: 3702:AT2G17980
uniprot id: A0A178VQN7
uniprot id: Q9SL48
names: Function
names: Similarity
messages: Belongs to the STXBP/unc-18/SEC1 family.
messages: May be involved in the early secretory pathway.

3702:AT4G19540
gene id: 3702:AT4G19540
uniprot id: A0A5S9XUK8
uniprot id: O49472
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Mrp/NBP35 ATP-binding proteins family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Essential during early vegetative growth (PubMed:24179128). Required for the assembly of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) (PubMed:24179128). Involved in mitochondrial translation activity (PubMed:24179128). May deliver of one or more Fe-S clusters to complex I subunits (By similarity).
messages: Homozygous mutants are lethal, seeds failing to germinate or arrested seedlings in early growth (PubMed:24179128). Loss of mitochondrial complex I and low levels of a 650-kDa assembly intermediate associated with a reduced mitochondrial translation activity (PubMed:24179128). Heterozygous plants display delayed bolting and flowering, with small and highly branched inflorescences; they also have sporophytic defects in female and male gametophyte development (PubMed:24179128).
messages: Mitochondrion matrix

3702:AT2G16640
gene id: 3702:AT2G16640
uniprot id: A0A654EYG1
uniprot id: Q9SLF3
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. TOC159 subfamily.
messages: Binds 1 Mg(2+) ion by subunit.
messages: By light conditions.
messages: Cytoplasm
messages: Expressed in seedlings, leaves, flowers, and roots.
messages: GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis. Probably specialized in the import of nuclear encoded non-photosynthetic preproteins from the cytoplasm to the chloroplast.
messages: Homodimer (By similarity). Part of the TOC core complex that includes 1 protein for the specific recognition of transit peptides surrounded by a ring composed of four proteins forming translocation channels, and four to five GTP-binding proteins providing energy. This core complex can interact with components of the TIC complex to form a larger import complex. Chloroplastic protein precursor such as prSS (precursor of the RuBisCO small subunit) interacts with these complexes. The TOC complex contains a specific subset of polar lipids such as digalactosyldiacylglyceride (DGDG), phosphatidylcholine (PC) and phosphatidylglycerol (PG).
messages: Membrane
messages: Phosphorylated by KOC1.
messages: chloroplast outer membrane

3702:AT2G21380
gene id: 3702:AT2G21380
uniprot id: Q9SJU0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
messages: chloroplast

3702:AT5G03790
gene id: 3702:AT5G03790
uniprot id: A0A1P8BAG8
uniprot id: A0A654FYG8
uniprot id: Q9LZR0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Nucleus
messages: Putative transcription factor.
messages: Transcription factor.
messages: Widely expressed.

3702:AT5G03310
gene id: 3702:AT5G03310
uniprot id: Q9LZF9
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G22220
gene id: 3702:AT5G22220
uniprot id: A0A178ULG8
uniprot id: Q9FV71
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Cytoplasm
messages: Expressed in a cell cycle-dependent manner. Most abundant at the G1/S transition. Lower but constant level in the following phases.
messages: Expressed in proliferating cells and several differentiated tissues. Detected in inflorescence and shoot apical meristems, cotyledonary vascular tissues, leaf primordia, young leaves, base of trichomes, central cylinder and elongation zone of roots, lateral root primordia, flowers, pistils of immature flowers and pollen grains.
messages: Heterodimer with DP proteins. Interacts (via dimerization domain) preferentially with DPA, but also with DPB. Interacts with PURA1 and retinoblastoma-related protein RBR1. Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells. Interacts with MYB3R4 only at early stages of leaves development (PubMed:26069325).
messages: Nucleus
messages: Phosphorylated.
messages: Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Involved in the control of cell-cycle progression from G1 to S phase and from G2 to M phase. Stimulates cell proliferation and delays differentiation. Represses cell enlargement and endoreduplication in auxin-free conditions.
messages: Up-regulated by light and by auxin. May be up-regulated by E2FA.

3702:AT3G44240
gene id: 3702:AT3G44240
uniprot id: A0A654FCM2
uniprot id: Q9LXM4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.

3702:AT1G77850
gene id: 3702:AT1G77850
uniprot id: A0A1P8AU56
uniprot id: Q84WU6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homo and heterodimers.
messages: Homodimers and heterodimers.
messages: Nucleus

3702:AT2G42280
gene id: 3702:AT2G42280
uniprot id: A0A178VVH5
uniprot id: A0A1P8AZV1
uniprot id: Q66GR3
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT3G47810
gene id: 3702:AT3G47810
uniprot id: A0A178V791
uniprot id: Q9STT2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VPS29 family.
messages: Component of the retromer complex which consists of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C), VPS5/17 (SNX1 or SNX2A or SNX2B). Component of a retromer subcomplex consisting of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C).
messages: Cytoplasm
messages: Dwarf phenotype with several auxin-related defects (PubMed:17889650, PubMed:29897620). Reduced primary root length and fewer secondary roots (PubMed:17889650, PubMed:29897620). Abnormal cotyledon shape, number and positioning (PubMed:17889650, PubMed:29897620). Accumulation of storage proteins globulin 12S and albumin 2S in dry seeds (PubMed:16926167).
messages: Endosome membrane
messages: Late endosome membrane
messages: Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. Required for the auxin-carrier protein PIN2 sorting to the lytic vacuolar pathway and the PIN1 recycling to the plasma membrane, thus influencing auxin transport orientation (PubMed:29897620). Also involved in the efficient sorting of seed storage proteins globulin 12S and albumin 2S. The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane.
messages: Prevacuolar compartment membrane
messages: trans-Golgi network membrane

3702:AT1G08465
gene id: 3702:AT1G08465
uniprot id: A0A654E9W9
uniprot id: Q9XFB0
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the YABBY family.
messages: Expressed at low levels in abaxial regions of lateral aerial organ primordia leading to cotyledons, leaves, flower meristems, sepals, petals, stamen and carpels, but not in roots.
messages: Expressed in subepidermal cells of anlagen regions, then in abaxial part of primordia and finally in differentiating organs. Levels decrease in differentiated organs. In embryo, expressed from the heart stage in the abaxial domain of the cotyledon primordia and decrease as the embryo matures. In stamen, expression restricted to the abaxial region differentiating into the connective. In gynoecium, expressed in the abaxial cell layers differentiating into the valves.
messages: Interacts with SPL/NZZ and SPEAR2 (PubMed:25527103).
messages: Involved in the abaxial cell fate determination during embryogenesis and organogenesis.
messages: Nucleus

3702:AT3G54140
gene id: 3702:AT3G54140
uniprot id: A0A178VD50
uniprot id: Q9M390
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Expressed in cotyledons, hypocotyls, leaves, roots, flowers, pistils and vascular tissue of sepals, anthers, carpels and funiculi. Not detected in seeds.
messages: Membrane
messages: Peptide transporter. Mediates the transport of di- and tripeptides. High affinity transporter with low selectivity. No transport of amino acids.
messages: Reduced growth and lower N content when cultivated on dipeptides. No effect on germination.

3702:AT1G60070
gene id: 3702:AT1G60070
uniprot id: F4IEP9
uniprot id: Q9ZUI6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 1 (AP-1) is a heterotetramer composed of two large adaptins (gamma-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes large subunit family.
messages: Golgi apparatus
messages: Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity).
messages: clathrin-coated vesicle membrane

3702:AT1G08890
gene id: 3702:AT1G08890
uniprot id: A0A178W7N4
uniprot id: Q9SCW7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT5G11820
gene id: 3702:AT5G11820
uniprot id: A0A654G0B5
uniprot id: F4JXZ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G67080
gene id: 3702:AT1G67080
uniprot id: Q8LFP9
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in root vasculature, root hairs, leaves, trichomes, sepals, stamens, stigma, pedicels, siliques and embryo.
messages: Induced by heat stress.
messages: No visible phenotype under normal growth conditions, but mutant plants accumulate violaxanthin and completely lack neoxanthin.
messages: Plants over-expressing ABA4 have increased levels of trans-neoxanthin.
messages: Required for neoxanthin biosynthesis, an intermediary step in abscisic acid (ABA) biosynthesis. Probably not involved directly in the enzymatic conversion of violaxanthin to neoxanthin. Cannot convert violaxanthin to neoxanthin in vitro. Required for ABA biosynthesis in response to drought stress (PubMed:17470058). Required for neoxanthin biosynthesis which is involved in photoprotection of photosystem II (PSII). Neoxanthin acts as an antioxidant within the photosystem PSII supercomplex (PubMed:17351115).
messages: chloroplast membrane

3702:AT1G17745
gene id: 3702:AT1G17745
uniprot id: A0A178W962
uniprot id: O04130
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Inhibited by 90 uM 3-phosphonooxypyruvate, but not by Ser, Thr, Val, Gly Trp, O-acetyl-L-Ser and Cys.
messages: Involved in the plastidial phosphorylated pathway of serine biosynthesis (PPSB).
messages: No visible phenotype.
messages: Not regulated by high CO(2) levels. Up-regulated upon necrotrophic pathogen infection.
messages: Ubiquitous, but highly expressed in roots and in dark-grown leaf tissues. Expressed in the vasculature, stigma, anther filaments and shoot apical meristem. Not detected in the root meristem or in embryo.
messages: chloroplast

3702:AT5G55370
gene id: 3702:AT5G55370
uniprot id: A0A5S9YE96
uniprot id: Q9FJ73
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the wax synthase family.
messages: Catalyzes the final step in the synthesis of long-chain linear esters (waxes).
messages: Membrane

3702:AT3G20920
gene id: 3702:AT3G20920
uniprot id: A0A654F964
uniprot id: F4IWB6
uniprot id: Q9LIH2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEC62 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT4G22210
gene id: 3702:AT4G22210
uniprot id: P82794
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G18550
gene id: 3702:AT3G18550
uniprot id: A1YKT1
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Detected in axillary mersitems which appears in the axils of leaves after flowering. During bud vegetative development, down-regulated in the outer layers of the meristem, but accumulates transiently in young leaf primordia. In buds bearing flowers, restricted to the provascular tissue underlying the bud. Accumulates in axillary buds, but disappears at the time of bud outgrowth.
messages: Expressed in unelongated axillary buds, and, to a lower extent, in axillary structures such as flowers and siliques.
messages: Induced during environmentally induced bud dormancy (planting density). Repressed transiently after shoot apical meristem (SAM) decapitation (release from apical dominance).
messages: Nucleus
messages: Transcription factor that prevents axillary bud outgrowth and delays early axillary bud development. Indirectly required for the auxin-induced control of apical dominance.

3702:AT5G41150
gene id: 3702:AT5G41150
uniprot id: A0A5S9Y9X6
uniprot id: Q2F6I1
uniprot id: Q9LKI5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the XPF family.
messages: Heterodimer with ERCC1/RAD10.
messages: Inactive.
messages: Isoform 1 and isoform 2 are widely expressed, predominantly in flowers, meristems and stems. Isoform 3 is detected at low levels.
messages: Nucleus
messages: Seems to be involved in nucleotide excision repair (NER) of damaged DNA (dark repair mechanism). Involved in repair of UV light, and probably oxidative damage. The UVH1/RAD1-ERCC1/RAD10 complex may act as an endonuclease making DNA incision 5' to the lesion site. In vitro, is implicated in double strand breaks (DSBs) repair and is required for homologous recombination in the presence of non-homologous overhangs. May mediate the induction of a DNA-damage sensitive cell-cycle checkpoint during the G2 phase.

3702:AT1G73030
gene id: 3702:AT1G73030
uniprot id: Q9SSM4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF7 family.
messages: Cytoplasm
messages: Endosome membrane
messages: Interacts with CHMP1A and LIP5 (PubMed:20663085). Interacts with VPS2.2 (PubMed:22010978).
messages: Involved in ESCRT-dependent multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Mediates the MVB sorting of the auxin carriers PIN1, PIN2 and AUX1. Required for embryonic axis establishment and seedling growth (PubMed:19304934). Required for autophagic degradation of plastid proteins. Promotes the efficient sequestration of cargo from plastids into autophagosomes. Mediates the efficient delivery of autophagic plastid bodies to the vacuole, but not into the cytoplasm (PubMed:25649438).
messages: No visible phenotype under normal growth conditions, but double mutants chmp1a and chmp1b show embryo development defect.

3702:AT5G61840
gene id: 3702:AT5G61840
uniprot id: A0A178UAL2
uniprot id: Q940Q8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: In flowers, expressed in anthers, stigmas and styles.
messages: Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.
messages: Membrane
messages: No visible phenotype (PubMed:18980662). Slightly short inflorescence and reduced fertility (PubMed:18980649).
messages: Present in the xylem and phloem, and, to a lower extent, in interfascicular cells. Expressed in the root tip, shoot apical meristem (SAM), xylem cells of roots and stems, and in the vasculature of roots, cotyledons and leaves.

3702:AT3G58990
gene id: 3702:AT3G58990
uniprot id: Q9LYT7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LeuD family.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (Probable). Functions redundantly with LEUD1 in the methionine chain elongation pathway of aliphatic glucosinolate formation.
messages: Expressed in vascular bundles of roots, cotyledons and rosette leaves (PubMed:24608865). Expressed in stem vascular bundles which branche off into lateral inflorescences (PubMed:24608865). Expressed in connective tissues in anthers (PubMed:24608865). In hypocotyls, expressed in parenchyma cells surrounding the vasculature (PubMed:32612621). In rosette leaves, expressed in phloem cells and cells close to the xylem along the vascular bundles (PubMed:32612621). In roots of adult plants, expressed in cells closely associated with the stele (PubMed:32612621). In flowering stalks, expressed in parenchyma cells associated with the phloem or the xylem (PubMed:32612621).
messages: Heterodimer of the large LEUC/IIL1 subunit and the small LEUD (SSU1, SSU2 or SSU3) subunits.
messages: No visible phenotype under normal growth conditions.
messages: Plastid
messages: chloroplast stroma

3702:AT5G04160
gene id: 3702:AT5G04160
uniprot id: A0A142FJX3
uniprot id: A0A384L8S5
uniprot id: Q9FYE5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Changes in cell wall monosaccharide composition with a strong reduction of galacturonic acid (GalA), rhamnose and xylose content in the sead coat mucilage composition.
messages: Expressed during seed development at the mucilage production stages.
messages: Golgi apparatus membrane
messages: Membrane
messages: UDP-glucuronic acid transporter that modulates the polysaccharide composition of seed mucilage. Transports UDP-glucuronic acid (UDP-GlcA) and UDP-galacturonic acid (UDP-GalA) in vitro.
messages: Ubiquitous.

3702:AT4G22790
gene id: 3702:AT4G22790
uniprot id: A0A178UU74
uniprot id: O49660
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Cell membrane
messages: Could function as a HCO(3)(-) -sensing component in the CO(2) signaling pathway in guard cells. Acts as an upstream repressor of HT1. Plays a role in stomatal response to CO(2).
messages: Defective in stomatal responses to Co(2). Showed more rapid leaf expansion under high CO(2) condition as compared with the wild type.
messages: Interacts with BCA4 and HT1.
messages: Membrane
messages: Preferentially expressed in guard cells.

3702:AT3G44830
gene id: 3702:AT3G44830
uniprot id: Q9FYC7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Membrane

3702:AT3G46740
gene id: 3702:AT3G46740
uniprot id: Q9STE8
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TOC75 family.
messages: Contains 3 N-terminal periplasmic polypeptide transport-associated (POTRA) domains which may serve as a binding site for the preprotein in the chloroplast intermembrane space, and provide a chaperone-like activity to prevent misfolding or aggregation in the intermembrane space (Probable). Transmembrane regions consist mainly of membrane-spanning sided beta-sheets, which are not predicted by sequence analysis tools (Probable).
messages: Essential protein. Mediates the insertion of proteins targeted to the outer membrane of chloroplasts (By similarity). Required for the import of protein precursors into chloroplasts. Forms the voltage-dependent preprotein translocation channels (hydrophilic beta barrel) of the TOC complex in the chloroplastic outer membrane.
messages: Expressed predominantly during the early stages of plant growth, peaking at three weeks after germination (at protein level).
messages: Mostly expressed in young and actively dividing photosynthetic tissues and, to a lower extent, in old leaves and roots. Particularly low levels in leaves after etiolation.
messages: Part of the TOC core complex that includes a protein for the specific recognition of transit peptides surrounded by a ring composed of four proteins forming translocation channels, and four to five GTP-binding proteins providing energy. This core complex can interact with components of the TIC complex to form a larger import complex. Chloroplastic protein precursors such as prSS (precursor of the RuBisCO small subunit) also interact with these complexes. The TOC complex contains a specific subset of polar lipids such as digalactosyldiacylglyceride (DGDG), phosphatidylcholine (PC) and phosphatidylglycerol (PG). TOC75-3 interacts with TOC34/OEP34, TOC159/TOC86, TOC132 and TOC120 (PubMed:15090618). Interacts with SP1 (PubMed:23118188). Interacts with TIC236 (PubMed:30464337).
messages: Plants have an embryo development arrested at the two cells stage.
messages: Up-regulated by CIA2 in leaves.
messages: chloroplast outer membrane

3702:AT2G39725
gene id: 3702:AT2G39725
uniprot id: A0A178VU17
uniprot id: Q8VZU1
names: Similarity
messages: Belongs to the complex I LYR family. SDHAF1 subfamily.

3702:AT2G15325
gene id: 3702:AT2G15325
uniprot id: Q6AWW0
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).

3702:AT4G20400
gene id: 3702:AT4G20400
uniprot id: A0A178UUW6
uniprot id: Q8GUI6
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Circadian-regulation with peak levels occurring at night and lower levels after dawn under both diurnal and constant light conditions in a CCA1- and LHY-dependent manner.
messages: Early flowering (especially in long day conditions), but normal development of all organs (PubMed:31038749). Partially redundant with ELF6. Increased H3K4 methylation on specific genes, thus leading to their derepression (PubMed:25578968, PubMed:31826870). Slightly increased levels of CCA1 and LHY circadian oscillators transcription factors as well as of other clock genes such as TOC1, PRR5, PRR7, PRR9, GI, ELF3, ELF4, and LUX associated with higher H3K4me3 levels near their promoters (PubMed:31429787). Impaired systemic RDR6-dependent post-transcriptional transgene silencing (PTGS) associated with reduced production of aberrant RNAs (e.g. uncapped and antisense) (PubMed:33986281). Abnormal root meristem size as well as partial suppression of reduced root meristem size and growth vigor observed in brx mutants (PubMed:31826870). Compromised in both local and systemic defense responses to the bacterial pathogen Pseudomonas syringae Pst DC3000 avrRpt2 due to abnormal H3K4me3 enrichment and reduced expression of defense genes involved in salicylic acid (SA)- and pipecolic acid (Pip)-mediated defense pathways (e.g. PR1, FMO1, ALD1 and SARD4) (PubMed:31622519). The double mutant jmj17-1 jmj14-1 has an early flowering phenotype (especially in long day conditions) (PubMed:31038749). The triple mutant jmj17-1 jmj14-1 jmj16-1 flowers even earlier (PubMed:31038749).
messages: Expressed in mature root vasculature and throughout root meristem.
messages: Expressed in shoot apex, primary root tip, trichomes of young leaves, leaf vascular tissues, anther filaments and styles. Detected in inflorescences, leaves, stems, roots and siliques. Mostly expressed in floral organs, and, at low levels, in other organs (PubMed:25578968).
messages: Interacts with NAC050 and NAC051/NAC052 (PubMed:25578968, PubMed:26617990). Interacts with THAL in the nucleus (PubMed:27792779).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional repressor (PubMed:25578968). Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3 with a higher activity for H3K4me3 and H3K4me2 than H3K4me1 (PubMed:29233856). No activity on H3K9me3/2, H3K36me3/2 and H3K27me3/2 (PubMed:29233856). Function as a nocturne 'eraser' to counteract the diurnal 'writer' methylase activity of ATXR3/SDG2 thus orchestrating the circadian rythm of histone modifications (e.g. H3K4me3) and modulating the rythmic expression of diurnal target genes; this mechanism relies also on the circadian clock oscillators CCA1 and LHY (PubMed:31429787). Involved in a negative regulation of root meristem growth upon suboptimal root growth conditions (PubMed:31826870). Represses FT and TSF expression to inhibit the floral transition. Binds around the transcription start site of the FT locus. Involved in the DRM2-mediated maintenance of DNA methylation, but not required for the de novo DNA methylation. Required for demethylating histone H3K4me3 at the target of RNA silencing. Counteracts the DNA methylation of expressed transgenes; specific attenuation of transgene DNA methylation enhances the production of aberrant RNAs (e.g. uncapped and antisense) that readily induce systemic RDR6-dependent post-transcriptional transgene silencing (PTGS) spreading (PubMed:33986281). Together with NAC051/NAC052 and NAC050, regulates gene expression and flowering time, probably by the promotion of RNA-mediated gene silencing (PubMed:25578968). Together with JMJ16 and JMJ17, required for plant growth and development (PubMed:31038749). Promotes local and systemic immunity (especially toward the bacterial pathogen Pseudomonas syringae Pst DC3000 avrRpt2) by regulating positively pathogen-induced H3K4me3 enrichment and expression of defense genes involved in salicylic acid (SA)- and pipecolic acid (Pip)-mediated defense pathways (e.g. PR1, FMO1, ALD1 and SARD4) (PubMed:31622519).
messages: nucleoplasm

3702:AT1G10700
gene id: 3702:AT1G10700
uniprot id: A0A1P8ANQ1
uniprot id: Q93Z66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ribose-phosphate pyrophosphokinase family.
messages: chloroplast

3702:AT2G04440
gene id: 3702:AT2G04440
uniprot id: Q9SJC5
names: Function
names: Similarity
messages: Belongs to the Nudix hydrolase family.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives, possibly using both NADH and ADP-ribose as substrates.

3702:AT5G01470
gene id: 3702:AT5G01470
uniprot id: A0A178U9R1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G20460
gene id: 3702:AT4G20460
uniprot id: Q9SUN3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Golgi stack membrane

3702:AT2G42350
gene id: 3702:AT2G42350
uniprot id: A0A178VPG0
uniprot id: Q9SLC4
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G09530
gene id: 3702:AT4G09530
uniprot id: A0A178V0W3
uniprot id: Q9M0P0
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT3G07600
gene id: 3702:AT3G07600
uniprot id: Q9SSF0
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Contains an apparent HMA-like domain but lacks the core conserved Cys-X-X-Cys motif.
messages: Probable heavy-metal-binding protein.

3702:AT2G47960
gene id: 3702:AT2G47960
uniprot id: O82263
names: Similarity
messages: Belongs to the TRAPPC13 family.

3702:AT5G27530
gene id: 3702:AT5G27530
uniprot id: F4K4C2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G24770
gene id: 3702:AT5G24770
uniprot id: A0A654G3U3
uniprot id: F4KII6
uniprot id: O82122
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the APS1/VSP family.
messages: Expression is enhanced during wounding.
messages: Highly expressed in flowers, but also found in leaves, vegetative shoots, petioles, peduncles, and receptacles of floral organs.
messages: May function as somatic storage protein during early seedling development.

3702:AT3G51910
gene id: 3702:AT3G51910
uniprot id: A0A654FEZ9
uniprot id: Q9SV12
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class A subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motif is a transcriptional activator element.
messages: Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:ArthCp010
gene id: 3702:ArthCp010
uniprot id: A0A178U6M9
uniprot id: A0A1B1W4S9
uniprot id: P56758
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase A chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.
messages: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast thylakoid membrane

3702:AT3G55254
gene id: 3702:AT3G55254
uniprot id: B3H6P2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT3G27360
gene id: 3702:AT3G27360
uniprot id: A0A384L1I5
uniprot id: P59226
uniprot id: Q0WRA9
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Can be acetylated to form H3K9ac, H3K14ac, H3K18ac and H3K23ac. H3K9ac could compete with H3K9me and prevent gene silencing. H3K9acK14ac molecules are 30-fold less abundant than H3K9ac or H3K14ac. Very low level of H3K9meK14ac. H3K14 is specifically acetylated by HAG1 and deacetylated by HDA6. H3K9ac is deacetylated by HDT1. H3K9ac is restricted to euchromatin. H3K18ac, but not H3K9ac, is cell-cycle dependent and linked to replication. Reduced H4R3me2s increases H3K14ac in the FLC chromatin and activates or maintains its transcription. Vernalization decreases H3K9/14ac in the promoter region of FLC.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Expressed during the S phase.
messages: Expressed in inflorescences, buds and seedlings.
messages: In meta- and anaphase, H3T11ph is found on the entire length of the condensed chromosomes, whereas H3S10ph and H3S28ph are confined to the pericentromeric regions. During the first meiotic division, H3S10ph and H3S28ph are found on the entire length of the chromosome. Both sites may be involved in sister chromatid cohesion. No phosphorylation detected during interphase. AUR1 and AUR2 phosphorylate only H3S10, while AUR3 phosphorylates both H3S10 and H3S28.
messages: Mono-, di- or trimethylated to form mainly H3K4me1/2/3, H3K9me1/2/3, H3K27me1/2/3 and H3K36me1/2/3. Very low monomethylation at H3K18me1 or H3K23me1. H3K4me1/2/3, H3K9me3, H3K27me3 and H3K36me1/2/3 are typical marks for euchromatin, whereas heterochromatic chromocenters are enriched in H3K9me1/2 and H3K27me1/2. H3K27me3 is largely restricted to the transcribed regions of single genes and not associated with low-nucleosome density regions. SUVR1 to SUVR5, ASHH1 to ASHH3, ASHR1 to ASHR3, and ATXR5 and ATXR6 methylate H3, with ASHH2 methylating specifically H3K4 and H3K36 and ATXR5 and ATXR6 monomethylating specifically H3K27me1 (PubMed:35298257). The Su(var)3-9 homolog proteins (SUVH1 to SUVH10) are H3K9-specific methyltransferases. Among them, KRYPTONITE (SUVH4) is only involved in di- or trimethylation. Regarding H3K9, the major forms are H3K9me1 (20%) and H3K9me2 (10%), while H3K9me3 is rare (0.2%). H3K9me is controlled by DNA methylation and is not required for the formation of constitutive heterochromatin, but double methylation H3K9meK27me is required for the recruitment of CMT3 to methylate heterochromatin and silence euchromatic loci. Very low level of H3K9meK14ac. 60% of H3K27 is found under the form of H3K27me1, 16% of H3K27me2 and 5% of H3K27me3. When associated with H3K27me, H3K36 can only be mono- or di-methylated. H327me2K36me1 or H3K27me1K36me2 are both found in 3% of the proteins. When not associated with H3K27me, H3K36 is only trimethylated. H3K36me3 is found in 3% of the proteins. H2BK143ub1 is probably prerequisite for H3K4me. Elevated H3K4me3 and H3K36me2 formed by ASHH2 are required for high FLC expression. Vernalization increases H3K9me2 and H3K27me2/3 and decreases H3K4me2 at the FLC locus, resulting in the epigenetic silencing of this floral repressor.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. The H3K9meK27me dimethylated N-terminal tail of histone H3 can directly interact with the chromodomains of CMT3 and/or LHP1 (PubMed:11898023, PubMed:15457214). Interacts with ORTH2 (PubMed:17242155). Interacts (in absence of H3K27me) with TSK (PubMed:35298257).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4me1/2/3 = mono-, di- and trimethylated Lys-5; H3K9me1/2/3 = mono-, di- and trimethylated Lys-10; H3K9ac = acetylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14ac = acetylated Lys-15; H3K18ac = acetylated Lys-19; H3K18me1 = monomethylated Lys-19; H3K23ac = acetylated Lys-24; H3K23me1 = monomethylated Lys-24; H3K27me1/2/3 = mono-, di- and trimethylated Lys-28; H3S28ph = phosphorylated Ser-29; H3K36me1/2/3 = mono-, di- and trimethylated Lys-37.

3702:AT3G27580
gene id: 3702:AT3G27580
uniprot id: Q05999
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed predominantly in root tissue with lower levels found in leaf, stem, seed and flower.
messages: No visible phenotype under normal growth conditions, but the quadruple d6pk, d6pkl1, d6pkl2 and d6pkl3 mutants are deficient in lateral root formation and mildly agravitropic, have fused or single cotyledons and narrow and twisted leaves, form few axillary shoots, are almost infertile and impaired in phototropic hypocotyl bending when exposed to lateral white light.
messages: Protein kinase that regulates the auxin transport activity of PIN auxin efflux facilitators by direct phosphorylation. D6PK-mediated PIN phosphorylation promotes auxin transport in the hypocotyl and this is a prerequisite for PHOT1-dependent hypocotyl bending.
messages: The activation loop within the kinase domain is the target of phosphorylation.

3702:AT5G03080
gene id: 3702:AT5G03080
uniprot id: A0A178URC2
uniprot id: Q6NLA5
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PA-phosphatase related phosphoesterase family.
messages: Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a primary role as PAP in plastids.
messages: Expressed in root tips, root branch points, vascular tissue of cotyledons and leaves, pistil, anthers and filaments.
messages: Inhibited by Mg(2+).
messages: Lethal effect when homozygous, due to defect in pollen germination and pollen tube growth.
messages: Membrane
messages: chloroplast inner membrane

3702:AT3G04930
gene id: 3702:AT3G04930
uniprot id: Q9CAV7
names: Miscellaneous
names: Similarity
messages: Belongs to the GeBP family.
messages: May be due to the presence of a micro intron.

3702:AT1G29940
gene id: 3702:AT1G29940
uniprot id: A0A178W5B4
uniprot id: F4I366
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: Component of the RNA polymerase I (Pol I) complex consisting of at least 13 subunits.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest core component of RNA polymerase I which synthesizes ribosomal RNA precursors. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol I is composed of mobile elements and NRPA2 is part of the core element with the central large cleft and probably a clamp element that moves to open and close the cleft.
messages: Defect in seed production due to female gametophyte developmental arrest.
messages: Essential for the completion of the three rounds of mitosis in female megaspores required for the development of mature gametophytes.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G03110
gene id: 3702:AT1G03110
uniprot id: A0A178VZV6
uniprot id: Q93WD7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat TRM82 family.
messages: Forms a heterodimer with the catalytic subunit.
messages: Nucleus
messages: Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

3702:AT5G04770
gene id: 3702:AT5G04770
uniprot id: A0A178UKC8
uniprot id: A0A1P8B9T8
uniprot id: A0A1P8B9U0
uniprot id: Q9LZ20
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Expressed in roots, stems, flowers, and leaves.
messages: Membrane
messages: Permease involved in the transport of the cationic neutral or acidic amino acids.
messages: chloroplast membrane

3702:AT4G18780
gene id: 3702:AT4G18780
uniprot id: A0A068FHR7
uniprot id: A0A654FQM6
uniprot id: Q8LPK5
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening.
messages: Cell membrane
messages: Confined to secondary cell wall developing tissues such as xylems and interfascicular regions. Expressed in young plants, stems, flowers and inflorescences, but not in leaves.
messages: Enhanced resistance to the pathogens Ralstonia solanacearum and Plectosphaerella cucumerina.
messages: Interacts with CESA4 and CESA7. Assembly with CESA4 and CESA7 is required for functional complex and localization in secondary cell wall deposition sites. Interacts with STL1 and STL2, but not with GOT1 (PubMed:27277162).
messages: Membrane
messages: Not found in embryos. Increasing amount as stems mature.
messages: S-acylated.

3702:AT1G14730
gene id: 3702:AT1G14730
uniprot id: A0A178WJE7
uniprot id: Q67ZF6
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Binds 2 heme b groups non-covalently.
messages: Homodimer.
messages: Membrane
messages: Two-heme-containing cytochrome. May catalyze ascorbate-dependent trans-membrane ferric-chelate reduction (By similarity).

3702:AT1G51920
gene id: 3702:AT1G51920
uniprot id: A0A178W909
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G42960
gene id: 3702:AT3G42960
uniprot id: Q9M1K9
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Expressed specifically in tapetal cells.
messages: May play a role in tapetum development.

3702:AT5G43840
gene id: 3702:AT5G43840
uniprot id: Q1PDN3
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family. Class A subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motif is a transcriptional activator element.
messages: Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT3G59740
gene id: 3702:AT3G59740
uniprot id: Q9ZR79
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici and to the bacteria Pseudomonas syringae, characterized by stronger necrotic symptoms.
messages: Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici and to the pathogenic bacteria Pseudomonas syringae.

3702:AT2G05755
gene id: 3702:AT2G05755
uniprot id: Q8S8A2
names: Similarity
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.

3702:AT2G03740
gene id: 3702:AT2G03740
uniprot id: A0A178VW41
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G76200
gene id: 3702:AT1G76200
uniprot id: Q8LDK3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Belongs to the complex I NDUFB2 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane

3702:AT3G55390
gene id: 3702:AT3G55390
uniprot id: A0A178VG10
uniprot id: Q9M2U0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT5G44370
gene id: 3702:AT5G44370
uniprot id: A0A178U9F1
uniprot id: Q9FKV1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.
messages: Golgi apparatus membrane
messages: Inorganic phosphate and probable anion transporter.
messages: Membrane
messages: Ubiquitous.

3702:AT5G58330
gene id: 3702:AT5G58330
uniprot id: A0A178UKK6
uniprot id: A0A654GCA1
uniprot id: F4KEX3
uniprot id: Q8H1E2
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LDH/MDH superfamily. MDH type 2 family.
messages: By low temperature and high light.
messages: Chloroplast NADP-MDH is activated upon illumination. In order to be enzymatically active, disulfide bridges on the protein must be reduced by thioredoxin which receives electrons from ferredoxin and the electron transport system of photosynthesis.
messages: Homodimer.
messages: May be due to a competing acceptor splice site.
messages: No visible phenotype under normal growth conditions and high-light conditions in short days.
messages: The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells (Probable). Plays an essential role in the regulation of catalase activity and the accumulation of a hydrogen peroxide-dependent signal by transmitting the redox state of the chloroplast to other cell compartments (PubMed:24591715).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT5G58450
gene id: 3702:AT5G58450
uniprot id: A0A1P8BDV1
uniprot id: F4KEY9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Auxiliary subunit of the NatB N-alpha-acetyltransferase complex. Required for flowering time regulation and for vegetative and reproductive plant development.
messages: Belongs to the MDM20/NAA25 family.
messages: Cytoplasm
messages: Leaf reticulation, mild leaf folding, early flowering and aborted or unfertilized ovules in siliques (PubMed:24244708). No stunted growth or enhanced resistance to pathogens (PubMed:25966763).
messages: Ubiquitously expressed, with a higher expression in vascular bundles, hydathodes, leaf primordia and the base of the trichomes.

3702:AT4G18360
gene id: 3702:AT4G18360
uniprot id: A0A1P8B993
uniprot id: O49506
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
messages: Catalyzes the oxidation of glycolate to glyoxylate, with a reduction of O2 to H2O2. Is a key enzyme in photorespiration in green plants.
messages: Homotetramer.
messages: Peroxisome

3702:AT2G31570
gene id: 3702:AT2G31570
uniprot id: A0A178VYF3
uniprot id: O04922
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutathione peroxidase family.
messages: By salt stress and metals. Up-regulated by salicylic acid (SA).
messages: Expressed in leaves, stems, flowers, green siliques and roots.
messages: Interacts with DJ1A.
messages: May constitute a glutathione peroxidase-like protective system against oxidative stresses.
messages: Nucleus
messages: cytosol

3702:AT1G67265
gene id: 3702:AT1G67265
uniprot id: Q6X5U0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Mostly expressed in flowers and stems, and, to a lower extent, in roots and leaves.
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, including leaves shape, pedicule elongation, inflorescence organization and fruit maturation, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT5G57110
gene id: 3702:AT5G57110
uniprot id: A0A384L942
uniprot id: Q0WV19
uniprot id: Q9LF79
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calmodulin.
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIB subfamily.
messages: Catalyzes the hydrolysis of ATP coupled with the transport of calcium.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The N-terminus contains an autoinhibitory calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.
messages: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell.

3702:AT1G01600
gene id: 3702:AT1G01600
uniprot id: A0A178WHA9
uniprot id: Q9LMM1
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By abscisic acid (ABA), auxin, the etylene precursor ACC and cold treatment. Down-regulated by wounding and in etiolated seedlings.
messages: Catalyzes the omega-hydroxylation of various fatty acids (FA). Acts on saturated and unsaturated fatty acids with chain lengths from C12 to C18. Involved in the biosynthesis of 16-hydroxypalmitate.
messages: Expressed in stems, flowers and siliques.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants have reduced content of the flower polyesters 16-hydroxypalmitate, 10,16-dihydroxypalmitate and 1,16-hexadecanedioate.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26890
gene id: 3702:AT3G26890
uniprot id: A0A5S9XGI3
uniprot id: A0A7G2ETL2
uniprot id: C0Z2U8
uniprot id: Q949N7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATOS family.
messages: Nucleus

3702:AT3G62580
gene id: 3702:AT3G62580
uniprot id: A0A384L060
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G53830
gene id: 3702:AT1G53830
uniprot id: Q42534
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in flower buds.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT1G18070
gene id: 3702:AT1G18070
uniprot id: Q8L835
uniprot id: Q9LMS7
names: Function
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

3702:AT3G25860
gene id: 3702:AT3G25860
uniprot id: A0A5S9XFR8
uniprot id: Q9SQI8
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Embryonic lethality when homozygous.
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
messages: chloroplast stroma

3702:AT5G45940
gene id: 3702:AT5G45940
uniprot id: Q8LET2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family. PCD1 subfamily.
messages: Coenzyme A diphosphatase which mediates the cleavage of CoA into 3',5'-ADP from CoA and 4'-phosphopantetheine. Can use malonyl-CoA, hexanoyl-CoA, lauroyl-CoA, myristoyl-CoA and palmitoyl-CoA as substrates, but not isobutyryl-CoA or propionyl-CoA.
messages: Expressed in roots, stems and leaves.
messages: Peroxisome membrane

3702:AT3G22100
gene id: 3702:AT3G22100
uniprot id: Q9LRJ4
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT2G34340
gene id: 3702:AT2G34340
uniprot id: A0A178VYI2
uniprot id: O80783
names: Similarity
messages: Belongs to the senescence regulator S40 family.

3702:AT3G55940
gene id: 3702:AT3G55940
uniprot id: Q9LY51
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in leaves, roots, flowers and siliques.
messages: Potentially inactive.
messages: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

3702:AT5G58310
gene id: 3702:AT5G58310
uniprot id: A0A5S9YF56
uniprot id: Q9LVL9
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Methylesterase shown to have methyl indole-3-acetic acid (MeIAA) esterase activity in vitro.
messages: Methylesterase.

3702:AT4G29120
gene id: 3702:AT4G29120
uniprot id: Q9SZE1
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HIBADH-related family. 3-hydroxyisobutyrate dehydrogenase subfamily.
messages: Mitochondrion
messages: Produced by alternative initiation at Met-23 of isoform 1.

3702:AT5G04080
gene id: 3702:AT5G04080
uniprot id: A0A178UQA4
uniprot id: Q6NN03
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: Cell membrane
messages: Cytoplasm
messages: Homodimer and heterodimers (PubMed:29272523). Binds weakly to CYSTM4, CYSTM6 and CYSTM7 (PubMed:29272523).
messages: Induced by salt in shoots.
messages: Involved in resistance to abiotic stress.
messages: Membrane
messages: Mostly expressed in roots, flowers and siliques and, to a lower extent, in stems and leaves.

3702:AT4G17895
gene id: 3702:AT4G17895
uniprot id: Q9FPS7
names: Function
names: Similarity
messages: Belongs to the peptidase C19 family.
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).

3702:AT2G15080
gene id: 3702:AT2G15080
uniprot id: Q9ZUK3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT4G34890
gene id: 3702:AT4G34890
uniprot id: A0A654FVJ8
uniprot id: Q8GUQ8
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the xanthine dehydrogenase family.
messages: Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.
messages: Binds 2 [2Fe-2S] clusters.
messages: By salt and drought stresses, and abscisic (ABA) treatment. Down-regulated by cold and freezing stresses.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Homodimer.
messages: Key enzyme involved in purine catabolism. Catalyzes the oxidation of hypoxanthine to xanthine and the oxidation of xanthine to urate. Regulates the level of ureides and plays an important role during plant growth and development, senescence and response to stresses. Possesses NADH oxidase activity and may contribute to the generation of superoxide anions in planta.
messages: Plants silencing simultaneously XDH1 and XDH2 show reduced growth, impaired silique development, increased seed sterility, precocious senescence of mature leaves and overaccumulation of xanthine.

3702:AT3G21890
gene id: 3702:AT3G21890
uniprot id: Q9LRM4
names: Function
names: Induction
names: Tissue Specificity
messages: Circadian-regulation. Peak of expression toward the end of the dark period in both long day and short day photoperiods.
messages: Developmental regulator acting by forming heterodimeric complexes, that sequester CO and CO-like (COL) proteins into non-functional complexes (PubMed:27015278). Involved in the CO-mediated long-day flowering-promotion pathway (PubMed:27015278). Engages CO and the transcriptional repressor TPL in a tripartite complex (By similarity). Involved in the CO-mediated long-day flowering-promotion pathway (PubMed:27015278).
messages: Highly expressed in shoot apical meristems and in vascular tissues of leaves. Also detected in petioles.

3702:AT4G22100
gene id: 3702:AT4G22100
uniprot id: O65458
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT4G28680
gene id: 3702:AT4G28680
uniprot id: A0A1P8B7T4
uniprot id: A0A1P8B7T5
uniprot id: A0A1P8B7T7
uniprot id: A0A5S9XX47
uniprot id: A8MQJ1
uniprot id: F4JM08
uniprot id: F4JM09
uniprot id: Q9M0G4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the group II decarboxylase family.
messages: Converts tyrosine into tyramine, a precursor of isoquinoline alkaloids and various amides.
messages: Cytoplasm
messages: Expressed specifically in flowers.
messages: Homotetramer.
messages: Induced by drougt stress, wounding and methyl jasmonate.
messages: Slight reduction of pollen grain size.

3702:AT3G14250
gene id: 3702:AT3G14250
uniprot id: Q1PEQ5
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT1G02560
gene id: 3702:AT1G02560
uniprot id: A0A178WMF0
uniprot id: Q9S834
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity).
messages: Component of the chloroplastic Clp protease core complex which consist of at least 16 proteins: CLPP4 (3 copies), CLPP5 (3 copies), CLPR4 (2 copies), ClpP1 (1 copy), CLPP6 (1 copy), CLPR2 (1 copy), CLPT1 (1 copy), CLPT2 (1 copy) and 3 copies of CLPP3 and/or CLPR1 and/or CLPR3 (PubMed:11278690, PubMed:14593120, PubMed:16766689, PubMed:16980539). The core complex is organized in two heptameric rings, one containing CLPP3,4,5,6 in a 1:2:3:1 ratio and the other CLPP1 and CLPR1,2,3,4 in a 3:1:1:1:1 ratio (PubMed:21712416). Interacts with CHIP (PubMed:26085677).
messages: Embryo lethal.
messages: Mostly expressed in leaves. Also detected in stems, and to a lower extent, in roots (at protein level).
messages: Repressed in darkness. Induced by high light stress and during cold acclimation (at protein level).
messages: Ubiquitinated in vitro by CHIP.
messages: chloroplast stroma

3702:AT5G10760
gene id: 3702:AT5G10760
uniprot id: Q9LEW3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Aspartyl protease involved in a homeostatic feedback mechanism regulating systemic immunity. Has only mild or no influence on local defenses. Acts downstream of salicylic acid to suppress systemic immunity.
messages: Belongs to the peptidase A1 family.
messages: Up-regulated locally and systematically during systemic acquired resistance (SAR) and locally by salicylic acid. The local induction is independent of EDS1 while the systemic induction is EDS1-dependent.
messages: apoplast

3702:AT3G55330
gene id: 3702:AT3G55330
uniprot id: P82538
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbP family.
messages: No visible phenotype.
messages: Required for efficient repair of photodamaged PSII, but not tightly associated with the complex.
messages: chloroplast thylakoid lumen

3702:AT5G58980
gene id: 3702:AT5G58980
uniprot id: F4KHQ8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the neutral ceramidase family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid (By similarity). Promotes oxidative stress resistance (PubMed:26150824).
messages: Increased sensitivity to C2-ceramide induced cell death.
messages: Secreted

3702:AT3G19930
gene id: 3702:AT3G19930
uniprot id: A0A178V5Z0
uniprot id: Q39228
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Cell membrane
messages: Induced locally by wounding, elicitors such as chitin, bacterial pathogens such as P.syringae, compatible fungal pathogens such as A.brassicicola, E.cichoracearum and F.oxysporum, and incompatible fungal pathogens such as B.graminis. Also induced by aphid feeding.
messages: Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Can transport glucose, methylglucose, galactose, xylose and mannose, but not fructose.
messages: Membrane
messages: Mostly in flowers and roots, especially in anthers, including pollen, and root tips. Also present in some hydathodes.

3702:AT4G04930
gene id: 3702:AT4G04930
uniprot id: Q9ZPH4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
messages: Endoplasmic reticulum membrane
messages: No visible phenotype under normal growth conditions.
messages: Specifically expressed in flowers.
messages: Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives. May be required for the biosynthesis of glucosylceramides.

3702:AT1G02950
gene id: 3702:AT1G02950
uniprot id: A0A178WJ49
uniprot id: A0A1P8AMT5
uniprot id: A0A654E7C7
uniprot id: Q84TK0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT5G51980
gene id: 3702:AT5G51980
uniprot id: Q9FNZ1
names: Miscellaneous
messages: May be due to a competing acceptor splice site.

3702:AT1G58215
gene id: 3702:AT1G58215
uniprot id: P0DMS1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NET family.
messages: Cell membrane
messages: Expressed specifically in pollen.
messages: Plant-specific actin binding protein. Associates with F-actin at the plasma membrane in growing pollen tubes. May be part of a membrane-cytoskeletal adapter complex.
messages: The NAB domain, also called NAB (NET actin-binding) domain, is sufficient for F-actin binding.

3702:AT2G31200
gene id: 3702:AT2G31200
uniprot id: Q9ZSK2
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.
messages: Belongs to the actin-binding proteins ADF family.
messages: By the root-knot nematode Meloidogyne incognita.
messages: Expressed in vascular tissues of all organs.
messages: Phosphorylated.
messages: cytoskeleton

3702:AT2G30330
gene id: 3702:AT2G30330
uniprot id: A0A178VYH2
uniprot id: A0A1P8B122
uniprot id: O22929
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the BLOC1S1 family.
messages: Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) (By similarity). Interacts with BLOS2 and SNX1.
messages: Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1), a complex that mediates the vacuolar degradative transport via the intracellular vesicle trafficking from the endosome to the vacuole. Probably regulates the PIN1 and PIN2 homeostasis through its interaction with SNX1.
messages: Cytoplasm
messages: Endosome
messages: Expressed in the whole plant (at protein level).
messages: Longer primary roots and more lateral roots in the RNAi mutant.

3702:AT1G20150
gene id: 3702:AT1G20150
uniprot id: F4HSQ2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT1G74550
gene id: 3702:AT1G74550
uniprot id: A0A178WF67
uniprot id: Q9CA60
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts redundantly with CYP98A8 as tricoumaroylspermidine meta-hydroxylase. Involved in phenolamide synthesis, but a recombinant CYP98A9 is unable to hydroxylate triferuloylspermidine. Unable to use 5-O-(4-coumaroyl) D-quinate or 5-O-(4-coumaroyl) shikimate as substrates.
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: Strongly expressed in root tips, inflorescence tips, young flower buds, stamen, tapetum and pollen. Detected in aging vasculature.

3702:AT3G24550
gene id: 3702:AT3G24550
uniprot id: Q9LV48
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Mostly expressed in inflorescence bolt, flower buds and siliques, and, to a lower extent, in roots, seedlings and leaves.

3702:AT2G17380
gene id: 3702:AT2G17380
uniprot id: A0A178W2P0
uniprot id: Q8LEZ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Adaptor protein complex 1 (AP-1) is a heterotetramer composed of two large adaptins (gamma-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes small subunit family.
messages: Expressed in seedlings, roots, stems, leaves, flowers and siliques (developing fruits and seeds).
messages: Golgi apparatus
messages: Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity).
messages: clathrin-coated vesicle membrane

3702:AT5G40870
gene id: 3702:AT5G40870
uniprot id: A0A178UHR6
uniprot id: Q9FKS0
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the uridine kinase family.
messages: Cytoplasm
messages: Expressed in roots, leaves and stems.
messages: In the C-terminal section; belongs to the UPRTase family.
messages: In the N-terminal section; belongs to the uridine kinase family.
messages: Involved in the pyrimidine salvage pathway (Probable) (PubMed:21828290, PubMed:31101721, PubMed:31907295). Phosphorylates uridine to uridine monophosphate (UMP) (PubMed:21828290, PubMed:31101721, PubMed:31907295). Phosphorylates cytidine to cytidine monophosphate (CMP) (PubMed:31101721). Does not possess uracil phosphoribosyltransferase (UPRTase) activity that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (PubMed:19563437, PubMed:21828290, PubMed:31101721).
messages: No visible phenotype under normal growth conditions (PubMed:17143579, PubMed:19563437). No decrease in uracil phosphoribosyltransferase activity (PubMed:17143579, PubMed:19563437). Loss of sensitivity to 5'-fluorouracil and 5'-fluorouridine (PubMed:17143579, PubMed:21828290).
messages: Was prevsiouly characterized as an enzyme that possesses uracil phosphoribosyltransferase (UPRT) activity (PubMed:17143579). Further publications show a lack of such activity (PubMed:19563437, PubMed:21828290).
messages: chloroplast

3702:AT1G77480
gene id: 3702:AT1G77480
uniprot id: A0A178WAJ2
uniprot id: F4I722
uniprot id: Q8W4C5
names: Caution
names: Similarity
messages: Belongs to the peptidase A1 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G52770
gene id: 3702:AT3G52770
uniprot id: Q9LXI8
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Competitive inhibitor of the HD-ZIPIII transcription factors in shoot apical meristem (SAM) development. Acts by forming non-functional heterodimers. Part of a negative feedback loop. Involved in SAM development and lateral organ patterning. Essential for proper functioning of stem cells in the SAM.
messages: Expressed in the adaxial epidermis of the cotyledons and leaves, and in the vascular cylinder of wild-type torpedo stage embryos. Confined in the central zone and the organizing center in the shoot apical meristem.
messages: Interacts with REV (PubMed:18055602, PubMed:18408069). Interacts with ATBH-8, ATBH-9, ATB-14 and ATB-15 (PubMed:18408069).
messages: No visible phenotype during the vegetative growth. Disrupted activities of the shoot apical meristem and/or axillary meristems after the transition to reproductive growth. Zpr3 and zpr4 double mutants exhibit homeotic transformation and ectopic meristem activity.
messages: Nucleus
messages: Up-regulated in response to increased HD-ZIPIII activity (PubMed:18055602). Up-regulated by ATHB-14 (PubMed:18408069). Up-regulated by REV (PubMed:22781836).

3702:AT1G09070
gene id: 3702:AT1G09070
uniprot id: O04023
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By cold stress in roots.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Interacts with RBOHF (via N-terminus).
messages: May act as an activator of the calcium-dependent activation of RBOHF that mediates reactive oxygen species (ROS) production and may play a role in cold responses.
messages: Protein storage vacuole membrane

3702:AT1G05160
gene id: 3702:AT1G05160
uniprot id: A0A654E8Z2
uniprot id: O23051
uniprot id: Q0WPQ3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Catalyzes three successive oxidations of ent-kaurenoic acid giving gibberellin 12 (GA12), a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development.
messages: Endoplasmic reticulum membrane
messages: Widely expressed. Highly expressed in influorescence stem, influorescence, and silique tissue. Weakly expressed in cauline and rosette leaves. Expressed at a higher level in stem and influorescence than AtKAO2/CYP88A4.

3702:AT1G31830
gene id: 3702:AT1G31830
uniprot id: Q9C6S5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Polyamine:cation symporter (PHS) (TC 2.A.3.12) family.
messages: Cell membrane
messages: Probable cell membrane polyamine/proton symporter involved in the polyamine uptake in cells.

3702:AT4G31180
gene id: 3702:AT4G31180
uniprot id: A0A178V0N3
uniprot id: Q9M084
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.
messages: Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA (By similarity). Involved in the perception of beta-aminobutyric acid (BABA) and required for BABA priming effect in disease resistance (PubMed:24776930).
messages: Endoplasmic reticulum
messages: cytosol

3702:AT1G77170
gene id: 3702:AT1G77170
uniprot id: Q3ECB8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT3G51230
gene id: 3702:AT3G51230
uniprot id: A0A384K8W9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G20990
gene id: 3702:AT2G20990
uniprot id: A0A5S9X041
uniprot id: A0A654EVY1
uniprot id: F4IFM6
uniprot id: F4IFM7
uniprot id: Q9SKR2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the synaptotagmin family.
messages: Cell membrane
messages: Endosome membrane
messages: Expressed in roots, shoots, rosette and cauline leaves, inflorescences, and siliques. In roots, expressed in vascular bundle, epidermis, the differential zone of the tips of root hairs, and the quiescent center and columella of root tips.
messages: Interacts with cabbage leaf curl virus (CaLCuV) BC1 protein and tobacco mosaic virus (TMV) MP protein (PubMed:20133785). Interacts with ROSY1 (PubMed:27044028).
messages: Membrane
messages: Phospholipid binding to the first C2 domain is calcium-dependent, but binding to the second C2 domain is calcium-independent.
messages: Plays an important role in maintaining plasma membrane integrity during freezing and osmotic stresses. May function in membrane resealing during calcium-dependent freezing tolerance. May regulate endocytosis and endosome recycling at the plasma membrane and cell-to-cell trafficking of cabbage leaf curl virus (CaLCuV) and tobacco mosaic virus (TMV) movement proteins via plasmodesmata.
messages: Reduced growth.

3702:AT1G32960
gene id: 3702:AT1G32960
uniprot id: A0A5S9WL57
uniprot id: Q9MAP5
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: By hydrogen peroxide and infection with the bacterial pathogen Pseudomonas syringae pv. tomato strain DC3000.
messages: No visible phenotype under normal growth conditions, but mutant plants have enhanced disease susceptibility to the pathogens P.syringae DC3000 and Hyaloperonospora arabidopsidis.
messages: Plants over-expressing SBT3.3 show enhanced disease resistance and enhanced activation of MPK3, MPK4, MPK6, MPK11 and OXI1.
messages: Serine protease that plays a role in the control of the establishment of immune priming and systemic induced resistance.
messages: extracellular matrix

3702:AT5G02070
gene id: 3702:AT5G02070
uniprot id: Q9LZM4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Lacks the calcium-binding EGF-like domain which is a conserved feature of the wall-associated receptor kinase family.
messages: Membrane
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

3702:AT5G46740
gene id: 3702:AT5G46740
uniprot id: A0A1P8BAX6
uniprot id: Q9FIQ1
names: Function
names: Similarity
messages: Belongs to the peptidase C19 family.
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).

3702:AT5G54220
gene id: 3702:AT5G54220
uniprot id: Q9FL73
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G36300
gene id: 3702:AT2G36300
uniprot id: A0A178VVA3
uniprot id: Q9SJM8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YIP1 family.
messages: Golgi apparatus membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT1G12663
gene id: 3702:AT1G12663
uniprot id: A8MRP4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant thionin (TC 1.C.44) family.
messages: May be involved in plant defense.
messages: Secreted

3702:AT4G17470
gene id: 3702:AT4G17470
uniprot id: A0A5S9XTF3
uniprot id: Q501G7
names: Similarity
messages: Belongs to the palmitoyl-protein thioesterase family.

3702:AT3G25800
gene id: 3702:AT3G25800
uniprot id: Q38950
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit A family.
messages: Each HEAT repeat appears to consist of two alpha helices joined by a hydrophilic region, the intrarepeat loop. The repeat units may be arranged laterally to form a rod-like structure (By similarity).
messages: Nucleus
messages: PP2A consists of a common heterodimeric core enzyme, composed of a 36 kDa catalytic subunit (subunit C) and a 65 kDa constant regulatory subunit (subunit A), that associates with a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (By similarity). Interacts with B'THETA (PubMed:25489022). Interacts with SRK2E/OST1 (PubMed:26175513). Interacts with SIC/RON3 (PubMed:26888284).
messages: Peroxisome
messages: The A subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of the catalytic subunit and a variable regulatory B subunit. Involved during developmental process such as seedling and floral developments. Seems to act as a negative regulator of PP2A catalytic activity. Associates with the serine/threonine-protein phosphatase PP2A catalytic subunit C and regulatory subunit B' to positively regulates beta-oxidation of fatty acids and protoauxins in peroxisomes by dephosphorylating peroxisomal beta-oxidation-related proteins (PubMed:25489022).
messages: Ubiquitous, with higher levels in roots and flowers (at protein level).
messages: cytosol

3702:AT2G39710
gene id: 3702:AT2G39710
uniprot id: O22282
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G44575
gene id: 3702:AT1G44575
uniprot id: Q9XF91
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ELIP/psbS family.
messages: Non-photochemical quenching phenotype.
messages: Plays an important role in non-photochemical quenching, a process maintains the balance between dissipation and utilization of light energy to minimize generation of oxidizing molecules, thereby protecting the plant against photo-oxidative damage. Is not necessary for efficient light harvesting and photosynthesis.
messages: chloroplast thylakoid membrane

3702:AT5G24380
gene id: 3702:AT5G24380
uniprot id: Q6R3K9
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the YSL (TC 2.A.67.2) family.
messages: Cell membrane
messages: Expressed in roots, leaves and weakly in shoots. Restricted to the veins, to the central cylinder of the young roots and to the pericycle and the endodermis cells facing the meta-xylem tubes in older roots. Expressed in the vasculature of sepals, petals, anthers, stigma and siliques, but not in developing seeds or in meristematic zones.
messages: Inhibition upon iron and zinc deficiency. Not regulated by copper. Subjected to diurnal regulation.
messages: May be involved in the lateral transport of nicotianamine-chelated metals in the vasculature.
messages: No visible phenotype.

3702:AT3G61200
gene id: 3702:AT3G61200
uniprot id: A0A654FJP0
uniprot id: Q9M2E4
names: Similarity
messages: Belongs to the thioesterase PaaI family.

3702:AT1G12900
gene id: 3702:AT1G12900
uniprot id: A0A178WA64
uniprot id: A0A1P8APR6
uniprot id: F4HNZ6
uniprot id: Q9LPW0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
messages: Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3-diphosphoglycerate by NADPH (By similarity).
messages: Plants contain three types of GAPDH: NAD-dependent cytosolic forms which participate in glycolysis, NAD-dependent chloroplastic forms which participate in plastidic glycolysis and NADP-dependent chloroplastic forms which participate in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). All the forms are encoded by distinct genes.
messages: Tetramer of either four A chains (GAPDH 2) or two A and two B chains (GAPDH 1).
messages: chloroplast stroma

3702:AT2G02230
gene id: 3702:AT2G02230
uniprot id: Q6NPT8
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G18310
gene id: 3702:AT5G18310
uniprot id: A0A384L7W1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G26180
gene id: 3702:AT5G26180
uniprot id: Q8GYE8
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
messages: Reduced methylation of the C(5) position of cytosine 2268 (m5C2268) in 25S rRNA.
messages: S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the C(5) position of cytosine 2268 (m5C2268) in 25S rRNA.

3702:AT1G27150
gene id: 3702:AT1G27150
uniprot id: Q9LFX3
names: Similarity
messages: Belongs to the TTC38 family.

3702:AT1G34510
gene id: 3702:AT1G34510
uniprot id: Q0WRX6
uniprot id: Q9LNL0
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT1G01180
gene id: 3702:AT1G01180
uniprot id: A0A178W7N2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G60880
gene id: 3702:AT3G60880
uniprot id: A0A654FJL5
uniprot id: Q9LZX6
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DapA family.
messages: Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
messages: May be due to a competing acceptor splice site.
messages: Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB.
messages: chloroplast

3702:AT5G40220
gene id: 3702:AT5G40220
uniprot id: Q9FL10
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G34620
gene id: 3702:AT4G34620
uniprot id: A0A178UZA3
uniprot id: O65686
names: Disruption Phenotype
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the bacterial ribosomal protein bS16 family.
messages: Embryo lethal, arresting development at the transition from the globular to the heart stage of embryonic development.
messages: Expressed in leaves, stems and flowers, and, to a lower extent, in roots.
messages: The chloroplast also encodes a gene for bS16c that is transcribed (AtCg00050).
messages: chloroplast

3702:AT5G37850
gene id: 3702:AT5G37850
uniprot id: A0A178UIH6
uniprot id: F4K8N1
uniprot id: Q8W1X2
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Becomes detectable 60 hours after imbibition of the seeds and remains constant up to 101 hours after imbibition.
messages: Belongs to the pyridoxine kinase family.
messages: Both long and short transcripts are down-regulated in roots but not in shoots by NaCl and abscisic acid treatment (PubMed:11910005). Under cold stress, the expression of the short transcript is increased while the long one becomes undetectable (PubMed:11910005).
messages: Catalyzes the transfer of a phosphate group from ATP to the 5-hydroxylmethyl group of pyridoxal to form the biologically active pyridoxal phosphate, an active form of vitamin B6 (PubMed:12068103, PubMed:12244454). Required for Na(+) and K(+) homeostasis and for salt tolerance (PubMed:11910005). Involved in root hair development, both for initiation and tip growth (PubMed:12068103).
messages: Defective pyridoxal kinase results in both salt hypersensitive and root hairless phenotypes (PubMed:11910005, PubMed:12068103). Hypersensitivity to Na(+), K(+) and Li(+) ions (PubMed:11910005). Increased accumulation of Na(+) ions but reduced K(+) retaining under NaCl stress (PubMed:11910005).
messages: Divalent metal cations. Zn(2+) >> Co(2+) > Mg(2+) > Mn(2+) > Ca(2+).
messages: Expressed ubiquitously in leaves, stems, roots, flowers and siliques (PubMed:12244454). Present in root hairs and other tip-growing cells such as papillar cells on the top of stigma (PubMed:12068103).
messages: Homodimer.

3702:AT1G22730
gene id: 3702:AT1G22730
uniprot id: A0A178WLK3
uniprot id: O80548
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PDCD4 family.
messages: Binds to EIF4A1 (PubMed:29084871). The association with ribosomes is modulated by cellular energy status and TOR activity (PubMed:29084871).
messages: Increased susceptibility to dark and starvation, and to treatment with the TOR inhibitor (PubMed:29084871). Decreased translation activity associated with altered ribosome patterns, especially in the dark and starvation conditions, in which mRNAs distribution is altered and rRNA abnormally degraded (PubMed:29084871). Slightly early flowering time under long-day conditions (PubMed:29084871).
messages: Induced by dark and starvation.
messages: Involved in target of rapamycin (TOR)-regulated translation control, especially under energy-deficient conditions.
messages: Mostly expressed in reproductive tissues, such as flower buds and flowers, and, to a lower extent, in vegetative tissues, such as leaves, roots and stems.
messages: Nucleus
messages: cytosol

3702:AT1G68790
gene id: 3702:AT1G68790
uniprot id: A0A5S9WR00
uniprot id: Q9CA42
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Altered nuclear morphology. Plants lacking both CRWN1 and CRWN3 exhibit markedly smaller rosettes. Plants lacking CRWN1, CRWN3 and CRWN4 are extremely stunted and set few seed.
messages: Belongs to the CRWN family.
messages: Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments (By similarity). Required for nucleus structure organization (e.g. size and shape) (PubMed:24308514, PubMed:23396599).
messages: Core component of the LINC complex which is composed of inner nuclear membrane SUN domain-containing proteins coupled to outer nuclear membrane WIP proteins, the nucleoskeletal CRWN/LINC proteins, and, possibly, KAKU4.
messages: Cytoplasm
messages: Expressed at low levels in roots, leaves, flowers and flower stalks.
messages: Nucleus lamina
messages: Nucleus membrane
messages: nucleoplasm

3702:AT1G10920
gene id: 3702:AT1G10920
uniprot id: O04093
names: Caution
names: Induction
names: Similarity
messages: Belongs to the disease resistance NB-LRR family. RPP8/HRT subfamily.
messages: Could be the product of a pseudogene. In strain cv. Columbia, a stop codon at position 117 and a naturally occurring frameshift at position 846 result in a truncated LOV1 protein. A complete sequence for LOV1 can be found in strain cv. Cl-0 (AC A7XGN8).
messages: Repressed by silencing mediated by polycomb group (PcG) protein complex containing EMF1 and EMF2.

3702:AT3G61560
gene id: 3702:AT3G61560
uniprot id: A0A1I9LMG1
uniprot id: Q6DBN4
names: Subcellular Location Annotation
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G49620
gene id: 3702:AT1G49620
uniprot id: A0A1P8ASU8
uniprot id: Q94CL9
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CDI family. ICK/KRP subfamily.
messages: Binds and inhibits CYCD2-1/CDKA-1 complex kinase activity. May target specifically CDKA-1.
messages: Expressed in flowers, in developing pollen, and at lower levels in roots and leaves.
messages: Present in uninucleate microspore and bicellular pollen.
messages: Specifically interacts with CDKA-1, but not with CDKB1-1. Interacts with CYCD4-1. Binds to FBL17.
messages: Ubiquitinated by SCF(FBL17). Ubiquitination leads to its subsequent degradation, thus controlling cell cycle progression.
messages: nucleoplasm

3702:AT5G52290
gene id: 3702:AT5G52290
uniprot id: F4KG50
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the XPF family.
messages: Essential for the formation of class I meiotic crossovers.
messages: Highest levels in young buds, where male meiosis occurs. Also present at low levels in plantlets, leaves, flowers, and roots.
messages: Interacts with PTD.
messages: Nucleus
messages: Reduction in the number of class I crossovers (COs) during meiosis (PubMed:18812090, PubMed:21771883). Impaired fertility due to altered male and female meiosis (PubMed:18812090).

3702:AT3G18970
gene id: 3702:AT3G18970
uniprot id: Q9LJ69
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G71420
gene id: 3702:AT1G71420
uniprot id: Q9C9H9
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT2G18620
gene id: 3702:AT2G18620
uniprot id: Q9ZU77
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.
messages: Monomer.
messages: chloroplast

3702:AT3G61680
gene id: 3702:AT3G61680
uniprot id: Q7Y220
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Plants overexpressing PLIP1 exhibit stunted growth and accumulate anthocyanin under normal growth conditions.
messages: Reduced levels of oil seeds and delay in seed germination.
messages: Sn-1-specific phospholipase A1 involved in seed oil biosynthesis. Hydrolyzes polyunsaturated acyl groups from a unique chloroplast-specific phosphatidylglycerol (PG) that contains 16:1 delta 3-trans as its second acyl group. The polyunsaturated acyl groups released by PLIP1 are exported from the chloroplast, reincorporated into phosphatidylcholine (PC), and ultimately enter seed triacylglycerol (TAG). In vitro, possesses broad substrate specificity. Can hydrolyze the galactolipid monogalactosyldiacylglycerol (MGDG), and the phoshpolipids phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidic acid (PA), phosphatidylserine (PS) phosphatidylglycerol (PG) and phosphatidylinositol (PI).
messages: chloroplast thylakoid membrane

3702:AT1G35440
gene id: 3702:AT1G35440
uniprot id: A0A654EH13
uniprot id: Q9C8P7
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin T subfamily.

3702:AT1G65380
gene id: 3702:AT1G65380
uniprot id: O80809
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In roots, mostly expressed in the stele and young epidermis cells and, to a weaker extent, in endodermis, cortex and differentiated columella cells.
messages: Insensitivity to root growth regulation by root CLE peptides (e.g. CLE8, CLE9/CLE10, CLE11, CLE13, CLE14, CLE16, CLE17, CLE18, CLE20, CLE21, CLE25, CLE26, CLE40, CLE41/CLE44 and CLE45) (PubMed:28607033). Impaired interaction with CRN (PubMed:27229734). Stem cell proliferation leading to enlarged shoot and flower meristems, as well as alterations in the development of the gynoecia, flower pedicels, and stamens. Reduced sensitivity to CLV3, CLE19 and CLE40 peptides. Ectopic fruit organ initiation after floral meristem termination (PubMed:21705761). Enhanced resistance to nematode infection (PubMed:21265896). Enhanced disease resistance response to the bacterial pathogen Ralstonia solanacearum and to the biotrophic oomycete pathogen Hyaloperonospora arabidopsidis (PubMed:26990325).
messages: Involved in the perception of CLV3 and CLV3-like (CLE) peptides, that act as extracellular signals regulating meristems maintenance. Required for the sensing of the root CLE peptides (e.g. CLE8, CLE9/CLE10, CLE11, CLE13, CLE14, CLE16, CLE17, CLE18, CLE20, CLE21, CLE25, CLE26, CLE40, CLE41/CLE44 and CLE45), which involves also CRN and leads to root growth regulation, mostly in the phloem and protophloem (PubMed:28607033). Involved in controlling the stem cell population size in shoot and root apical meristems, and during organ development. Promotes the formation of CLV1 multimers. In complex with CRN, perceives secreted CLV3-like effector proteins from plant-parasitic cyst nematodes as ligand mimics of the plant CLE signaling pathway (PubMed:21265896, PubMed:21750229). This recognition is required for proper feeding structure (syncytium) development and ultimately successful nematode infection (PubMed:21265896, PubMed:21750229). CLE14 perception by CLV2/CRN complex triggers root meristem differentiation (PubMed:20697738, PubMed:28586647).
messages: Mostly expressed in apices (e.g. shoot apical meristem and flower buds), and, to a lower extent, in flowers, leaves, seedlings and siliques. Also expressed in the inner tissues of the proximal root meristem (PubMed:21265896). Expressed throughout the vascular cylinder of root tips (PubMed:28607033).
messages: Parts of a tetrameric complex made of two CLV2/CRN heterodimers that can interact with CLV3 and CLE peptides. CLV2/CRN heterodimer interacts with CLV1 homodimers. Interacts with CRN; this dimer can interact with BAM3 (PubMed:28607033, PubMed:27229734). Interacts with CLE14 (PubMed:28586647).

3702:AT1G26945
gene id: 3702:AT1G26945
uniprot id: A0A178WEJ4
uniprot id: Q8GW32
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Atypical and probable non DNA-binding bHLH transcription factor that regulates light-mediated responses in day light conditions by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. Forms non-functional heterodimers with HFR1, causing liberation and activation of PIF4 from the transcriptionally inactive HFR1-PIF4 complex.
messages: Belongs to the bHLH protein family.
messages: Circadian regulation with a peak of expression at midday.
messages: Cytoplasm
messages: Gain-of-function mutants kdr-D (T-DNA tagging) show long hypocotyls, pale green and slightly narrow leaves, elongated petioles and early flowering. They are not sensitive to the gibberellin inhibitor paclobutrazol during seed germination (PubMed:16786307).
messages: Interacts with HFR1.
messages: Nucleus

3702:AT3G11830
gene id: 3702:AT3G11830
uniprot id: A0A178VGX5
uniprot id: Q9SF16
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TCP-1 chaperonin family.
messages: Cytoplasm
messages: Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter (PubMed:11599560). Interacts with KNAT1 (PubMed:21868675).
messages: Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter.
messages: Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.

3702:AT5G01530
gene id: 3702:AT5G01530
uniprot id: A0A384LC70
uniprot id: Q07473
uniprot id: Q0WW97
names: Cofactor
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: Photoregulated by reversible phosphorylation of its threonine residues.
messages: The LHC complex consists of chlorophyll a-b binding proteins.
messages: The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT1G29970
gene id: 3702:AT1G29970
uniprot id: A8MRF3
uniprot id: Q8L9S1
names: Caution
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL20 family.
messages: Has been suggested to be a pseudogene, RNA seq evidence shows this is transcribed.

3702:AT1G47870
gene id: 3702:AT1G47870
uniprot id: A0A178W9F7
uniprot id: A0A178WB46
uniprot id: F4HV47
uniprot id: Q9FV70
names: Caution
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Cytoplasm
messages: Down-regulated by light.
messages: Expressed in a cell cycle-dependent manner. Not detected at the G1/S transition, but increases during the progression into S phase and peaks after the passage into G2.
messages: Expressed in meristematic areas, vascular tissues, apical part of the roots, cotyledons, upper region of the hypocotyls, trichomes, young flower buds and pollen grains.
messages: Heterodimer with DP proteins. Interacts preferentially with DPB, but also with DPA. No interaction with DPB when phosphorylated. Interacts with SKP2A, CDKA-1 and maize retinoblastoma-related protein RBR1. Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells. Interacts with MYB3R3 at later stages of leaves development (PubMed:26069325).
messages: Involved in transcriptional repression. May act by repressing E2F-regulated genes in mature differentiated cells, but is not an antagonist of E2FA. Restricts cell division and is involved in the coordination between cell proliferation and endoreduplication during development. May play a role during the transition from skotomorphogenesis to photomorphogenesis. Regulated by phosphorylation-dependent proteolysis via the protein-ubiquitin ligase SCF(SKP2A) complex.
messages: Nucleus
messages: Phosphorylated by cyclin-dependent kinase. Phosphorylation is necessary to target E2FC for proteolysis.
messages: The N-terminal region (1-100) is important for both SKP2A binding and ubiquitin-mediated degradation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G15960
gene id: 3702:AT5G15960
uniprot id: P18612
names: Induction
messages: By cold stress, abscisic acid (ABA) and water stress.

3702:AT4G24950
gene id: 3702:AT4G24950
uniprot id: Q9SW31
names: Domain
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with SUN1 and SUN2.
messages: Nucleus membrane
messages: The KASH domain, which contains a transmembrane domain, mediates the nuclear envelope targeting and is involved in the binding to the SUN proteins.

3702:AT4G21326
gene id: 3702:AT4G21326
uniprot id: A0A2H1ZEN8
names: Similarity
messages: Belongs to the peptidase S8 family.

3702:AT2G25450
gene id: 3702:AT2G25450
uniprot id: A0A654EX74
uniprot id: Q9SKK4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Polymorphism
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cv. Adb-0, cv. Ag-0, cv. Ang-0, cv. Bla-10, cv. Bs-1, cv. Bur-0, cv. Cal-0, cv. Cnt-1, cv. Columbia, cv. Di-1, cv. Edi-0, cv. Ei-2, cv. Ema-1, cv. Et-0, cv. Ge-0, cv. Lc-0, cv. Lo-2, cv. Mir-0, cv. Mrk-0, cv. Mt-0, cv. Pog-0, cv. Rd-0, cv. Rou-0, cv. Sf-1, cv. Tac-0, cv. Wei-0 and cv. Yo-0 contain a leaf- and seed-functional allele. Cv. Di-0, cv. Kas-1, cv. Lip-0, cv. Landsberg erecta, cv. Sha, cv. Sorbo, cv. Tsu-1 and cv. Wassilewskija contain a seed-only-functional allele. Cv. Cvi-0, cv. Hodja-Obi-Garm and cv. Kon contain a null allele. The null allele in cv. Cvi-0 is produced by 5 amino acid substitutions while the one in cv. Kon or cv. Hodja-Obi-Garm is produced by a substitution generating a stop codon at position 132.
messages: Expressed in leaves and seeds. All cultivars with seed-only-functional allele have low to non-detectable GSL-OH expression in the leaves.
messages: Necessary for the hydroxylation of but-3-enyl glucosinolate to 2-hydroxybut-3-enyl glucosinolate, which is toxic to insects, bacteria and nematodes, inhibits seed germination and produces bitter flavors.
messages: Plants exhibit a complete absence of 2-hydroxybut-3-enyl glucosinolate accumulation and a decreased resistance to generalist herbivory.

3702:AT4G21705
gene id: 3702:AT4G21705
uniprot id: Q84JR3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G64020
gene id: 3702:AT5G64020
uniprot id: A0A178URF3
uniprot id: Q0WPS0
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G09000
gene id: 3702:AT1G09000
uniprot id: O22040
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
messages: Expressed in roots, inflorescence stems, flower buds and flowers. Low amount in rosette and cauline leaves.
messages: May be involved in an oxidative stress-mediated signaling cascade that phosphorylates downstream MAP kinases MPK3 and MPK6. May suppress auxin signaling that promotes cell cycle. Functionally redundant to ANP2 and ANP3 in the positive regulation of cytokinesis.
messages: The protein kinase activity of isoform 1S is higher than that of isoform 1L.

3702:AT5G24040
gene id: 3702:AT5G24040
uniprot id: A0A178UIG9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G14320
gene id: 3702:AT3G14320
uniprot id: Q9LUL6
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G07510
gene id: 3702:AT5G07510
uniprot id: A0A654FZB9
uniprot id: F4K817
uniprot id: Q1PDZ0
uniprot id: Q9LY11
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oleosin family.
messages: Lipid droplet

3702:AT3G01320
gene id: 3702:AT3G01320
uniprot id: F4JAQ8
uniprot id: Q9SRH9
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a transcriptional repressor. An histone deacetylase (HDAC) activity is required for transcription repression. May play a role in telomere stability.
messages: Interacts (via PAH3) with ALY2. Interacts (via PAH2) with TBP1. Interacts with ALY3, GATA21, TRP2, TKI1, VAL1, SKP1B, FBX5 and PUB14.
messages: Nucleus

3702:AT4G14785
gene id: 3702:AT4G14785
uniprot id: A0A178UZC3
uniprot id: P82642
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Flower buds.
messages: Secreted

3702:AT1G08120
gene id: 3702:AT1G08120
uniprot id: A0A178W3X3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G32250
gene id: 3702:AT2G32250
uniprot id: A0A1P8B0H6
uniprot id: A0A1P8B0I3
uniprot id: A0A1P8B0K4
uniprot id: Q3EBQ3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT4G29440
gene id: 3702:AT4G29440
uniprot id: A0A5S9XXE4
uniprot id: F4JNM2
uniprot id: F4JNM3
names: Similarity
messages: Belongs to the IST1 family.

3702:AT2G25580
gene id: 3702:AT2G25580
uniprot id: A0A178VVM1
uniprot id: Q680H3
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT3G63010
gene id: 3702:AT3G63010
uniprot id: A0A5S9XNI8
uniprot id: Q9LYC1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Functions as soluble gibberellin (GA) receptor. GA is an essential hormone that regulates growth and development in plants. Binds with high affinity the biologically active gibberellin GA4, but has no affinity for the biologically inactive GAs. In response to GA, interacts with specific DELLA proteins, known as repressors of GA-induced growth, and targets them for degradation via proteasome. Seems to be required for GA signaling that controls root growth, seed germination and flower development. May function as a dominant GA receptor at low GA concentrations in germination. Partially redundant with GID1A and GID1C.
messages: Interacts with the DELLA proteins GAI, RGA, RGL1, RGL2 and RGL3 in a GA-dependent manner.
messages: No visible phenotype under normal growth condition.
messages: Nucleus
messages: Widely expressed.

3702:AT2G28560
gene id: 3702:AT2G28560
uniprot id: Q9SK02
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RecA family. RAD51 subfamily.
messages: Induced by ionizing irradiation and treatment with a cross-linking reagent, cisplatin.
messages: May be due to an intron retention.
messages: May be involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents.
messages: Nucleus
messages: Preferentially expressed in flower buds and roots.

3702:AT4G12790
gene id: 3702:AT4G12790
uniprot id: A0A384LB56
uniprot id: Q8W4C1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GPN-loop GTPase family.
messages: Binds to RNA polymerase II (RNAPII).
messages: Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import.

3702:AT1G01430
gene id: 3702:AT1G01430
uniprot id: A0A346P850
uniprot id: Q84JH9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May be involved in the O-acetylation of mannan (PubMed:22086088). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity).
messages: Membrane

3702:AT5G37830
gene id: 3702:AT5G37830
uniprot id: Q9FIZ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oxoprolinase family.
messages: Catalyzes the cleavage of 5-oxo-L-proline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. Acts in the glutathione degradation pathway.
messages: Cytoplasm
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: No morphological phenotype, but high accumulation of 5-oxoproline and decreased concentration of glutamate.

3702:AT4G39940
gene id: 3702:AT4G39940
uniprot id: A0A178V573
uniprot id: O49196
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the APS kinase family.
messages: Catalyzes the synthesis of activated sulfate.
messages: Catalyzes the synthesis of activated sulfate. Essential for plant reproduction and viability. Required for the production of glucosinolates.
messages: Expressed in root vasculature, root tips, leaf epidermal cells and funiculus of developing seeds.
messages: Interacts with APK1.
messages: No visible phenotype under normal growth conditions. Apk1 and apk2 double mutant exhibits a semi-dwarf phenotype.
messages: chloroplast

3702:AT5G50440
gene id: 3702:AT5G50440
uniprot id: Q541Y1
uniprot id: Q9FK28
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GOSR2 family.
messages: Golgi apparatus membrane
messages: Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
messages: Membrane

3702:AT5G46370
gene id: 3702:AT5G46370
uniprot id: A0A178UQZ6
uniprot id: Q9FL25
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the two pore domain potassium channel (TC 1.A.1.7) family.
messages: Each of the two pore-forming region (also called P-domain or P-loop) is enclosed by two transmembrane segments (2P/4TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity.
messages: Expressed in roots, stems, leaves and flowers.
messages: Homodimer.
messages: Membrane
messages: Probable voltage-independent potassium-selective tonoplast ion channel.
messages: Vacuole membrane

3702:AT5G50280
gene id: 3702:AT5G50280
uniprot id: Q9FGR7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: chloroplast

3702:AT3G53770
gene id: 3702:AT3G53770
uniprot id: A0A178V790
uniprot id: Q9M349
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LEA type 3 family.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G30080
gene id: 3702:AT1G30080
uniprot id: A0A1P8ANI0
uniprot id: F4I4R0
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT3G25810
gene id: 3702:AT3G25810
uniprot id: Q9LRZ6
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsb subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Expressed exclusively in mature flowers, but not in inmmature buds.
messages: Involved in monoterpene (C10) biosynthesis. The major products are alpha- and beta-pinene, sabinene, beta-myrcene, (E)-beta-ocimene and limonene.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).
messages: chloroplast

3702:AT2G35390
gene id: 3702:AT2G35390
uniprot id: A0A178VYX1
uniprot id: A0A178W087
uniprot id: F4IJW3
uniprot id: Q42581
names: Cofactor
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ribose-phosphate pyrophosphokinase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: May be due to an intron retention.
messages: chloroplast

3702:AT1G80900
gene id: 3702:AT1G80900
uniprot id: Q9SAH0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.
messages: Cell membrane
messages: Expressed in the whole plant.
messages: Has the ability to complement mutants in Salmonella enterica and yeast lacking magnesium transport capability.
messages: High-affinity magnesium transporter that mediates the influx of magnesium. Involved in tolerance to Aluminum.

3702:AT4G01610
gene id: 3702:AT4G01610
uniprot id: A0A178UYV4
uniprot id: A0A5S9XPB1
uniprot id: Q94K85
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase C1 family.
messages: By dark-induced senescence. Induced by infection with an avirulent strain of the bacterial pathogen Pseudomonase syringae pv. tomato DC3000.
messages: Delayed germination and decreased germination rate.
messages: Expressed in developing siliques 13 to 15 days after pollination (DAP). In germinating seeds, expressed from 12 to 48 hours after imbibition with a peak of expression at 24 hours.
messages: Expressed in root tips, root vasculature, emerging lateral root, hydathodes, vascular tissue of leaves, vasculature of sepals and anthers, stigma, and vascular bundles at the base and the upper part of the siliques.
messages: Inhibited by the cathepsin B inhibitors Ac-LVK-CHO, CA-074 and Z-FA-FMK, and the caspase-3 inhibitor Z-DEVD-CHO.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Thiol protease that possesses high activity toward the cathepsin synthetic substrate Arg-Arg-7-amino-4-methylcoumarin (RR-AMC) and the papain substrate Gly-Arg-Arg-AMC (GRR-AMC). Can cleave the papain substrate Phe-Arg-AMC (FR-AMC) and the caspase-3 substrate Asp-Glu-Val-Asp-rhodamine 110 (DEVD-R110). Has no activity towards the caspase-6 substrate VEID-AMC, caspase-8 substrate IETD-AMC and caspase-1 substrate YVAD-AMC (PubMed:27058316). Plays a central role in plant programmed cell death (PCD). In addition to its role in protein degradation, may cleave and/or degrade a number of target proteins, activating signaling towards PCD. Contributes to the increase of caspase-3-like activity after UV-C-induced PCD and is required for abiotic stress-induced PCD (PubMed:27058316). Functions redundantly with CATHB1 and CATHB2 in basal defense and distinct forms of plant programmed cell death (PCD). Participates in the establishment of basal resistance against the bacterial pathogen Pseudomonase syringae pv. tomato DC3000. Required for full levels of PCD during resistance (R) gene-mediated hypersensitive response (HR). Involved in the regulation of senescence, a developmental form of PCD in plants (PubMed:19453434). May be involved in the degradation of seed storage proteins during seed germination (PubMed:24600022).
messages: Vacuole

3702:AT5G56130
gene id: 3702:AT5G56130
uniprot id: Q9FKT5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export. Contributes to the integrity of the endogenous trans-acting small interfering RNA (ta-siRNA) pathway. May process or transport a long RNA molecule so that it can be a template for secondary siRNA production. May participate in the trafficking of siRNA precursors to the ARGONAUTE catalytic center. Required for the generation of functional messenger ribonucleoproteins (mRNPs).
messages: Component of the THO complex, which is composed of THO1, THO2, THO3, THO5, THO6 and THO7.
messages: Developmental defects as well as reduced levels of endogenous trans-acting small interfering RNA (ta-siRNA).
messages: Nucleus

3702:AT3G13460
gene id: 3702:AT3G13460
uniprot id: A0A384L1F9
uniprot id: F4JDC2
uniprot id: F4JDC3
uniprot id: F4JDC5
uniprot id: Q9LJE5
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aberrant trichome branching with an increase in number of spikes (PubMed:29643069, PubMed:29716990). The double mutant plants ect2 and ect3 exhibit delayed timing of leaf formation and altered leaf morphology (PubMed:29643069).
messages: Belongs to the YTHDF family.
messages: Cytoplasm
messages: Expressed in the shoot apex, at the sites of leaf formation, and in emerging leaves (PubMed:29643069). Highly expressed in rapidly developing tissues (PubMed:29716990).
messages: Interacts (via C-terminus) with CIPK1.
messages: Nucleus
messages: Sequencing errors.
messages: Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability (Probable) (PubMed:29716990, PubMed:29618631). M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (Probable) (PubMed:29716990, PubMed:29618631). Binds preferentially in the 3'UTRs of target genes (PubMed:29716990). May play dual roles in regulating 3'UTR processing in the nucleus and facilitating mRNA stability in the cytoplasm (PubMed:29716990). Required for the correct timing of leaf formation and normal leaf morphology (PubMed:29643069). Functions redundantly with ECT3 (PubMed:29643069). Required for proper trichome branching and morphology (PubMed:29643069, PubMed:29716990, PubMed:29618631). Controls trichome morphology by binding transcripts related to trichome morphogenesis and affecting their stability (PubMed:29716990, PubMed:29618631).
messages: Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing.

3702:AT1G68500
gene id: 3702:AT1G68500
uniprot id: A0A178WEM2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G61177
gene id: 3702:AT3G61177
uniprot id: P82767
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G23350
gene id: 3702:AT2G23350
uniprot id: A0A178VSF7
uniprot id: O22173
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A.thaliana contains 8 PABP genes.
messages: Belongs to the polyadenylate-binding protein type-1 family.
messages: Binds the poly(A) tail of mRNA.
messages: Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation (By similarity). During infection with potyvirus TuMV, acts as a potential integral component of the viral replicase complex that could play an important role in the regulation of potyviral RNA-dependent RNA polymerase (RdRp) (By similarity).
messages: By potyvirus TuMV infection.
messages: Cytoplasm
messages: Interacts with ERD15/CID1. Interacts with Turnip mosaic virus (TuMV) VPg-Pro.
messages: Nucleus
messages: Pab2 and pab4 double mutants show significant growth and development defects and more resistance to Turnip mosaic virus (TuMV).

3702:AT1G07530
gene id: 3702:AT1G07530
uniprot id: A0A384LCI2
uniprot id: B9DFJ3
uniprot id: Q9XE58
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in roots, shoots, flowers and siliques.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT3G51460
gene id: 3702:AT3G51460
uniprot id: A0A178VA55
uniprot id: Q9C5G5
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By wounding.
messages: Cytoplasmic vesicle membrane
messages: Endoplasmic reticulum membrane
messages: Phosphoinositide phosphatase that preferentially hydrolyzes PtdIns(4)P. Regulates the accumulation of PtdIns(4)P on membrane compartments at the tips of growing root hairs leading to proper root hair development.
messages: Short, bulged and branched root hairs. Accumulates elevated levels of PtdIns(4)P in roots.
messages: The phosphatase catalytic core motif (or RXNCXDCLDRTN motif) from the SAC domain is found in metal-independent protein phosphatases and inositol polyphosphate phosphatases.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT4G14210
gene id: 3702:AT4G14210
uniprot id: A0A178UUG9
uniprot id: Q07356
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the carotenoid/retinoid oxidoreductase family.
messages: Converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene with a concomitant isomerization of two neighboring double bonds at the C9 and C9' positions from trans to cis.
messages: Homotetramer.
messages: Membrane
messages: Ripening fruit.
messages: chloroplast
messages: chromoplast

3702:AT5G11800
gene id: 3702:AT5G11800
uniprot id: A0A178UL54
uniprot id: B5X0N6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. KEA (TC 2.A.37.1) subfamily.
messages: Down-regulated by high K(+).
messages: Electroneutral K(+)/H(+) efflux antiporter involved in K(+) homeostasis and osmotic adjustment (PubMed:24278440, PubMed:31296940, PubMed:30309966, PubMed:30255504). Together with KEA4 and KEA5, promotes growth and development, and facilitates endosomal pH and ions homeostasis, as well as salt tolerance (e.g. K(+), NaCl and LiCl), probably by supporting cell wall biosynthesis during rapid etiolated seedling growth (PubMed:30309966, PubMed:30255504).
messages: Endomembrane system
messages: Expressed in roots, stems, leaves, flowers and silique.
messages: Golgi apparatus membrane
messages: In roots, expressed in all cell types, including root hairs (PubMed:30309966). Also observed in the vascular bundles and tips of cotyledons, the base of true leaves, the ovarian stigma and pollen grains within the anthers, and the tip and base of the siliques (PubMed:30309966).
messages: Membrane
messages: No visible phenotype (PubMed:30309966, PubMed:30255504). The triple mutant kea4 kea5 kea6 is compromised in cell wall biosynthesis and has small rosettes, short seedlings, and is sensitive to low potassium K(+) availability and to high salinity (e.g. K(+), NaCl and LiCl); it also exhibits a reduced luminal pH in the Golgi, trans-Golgi network, prevacuolar compartment and vacuole (PubMed:30309966, PubMed:30255504). These phenotypes are partially suppressed by the cell wall-derived pectin homogalacturonan trigalacturonic GalA(3) in the dark but not in light conditions (PubMed:30255504).
messages: Prevacuolar compartment membrane
messages: trans-Golgi network membrane

3702:AT4G14790
gene id: 3702:AT4G14790
uniprot id: A0A178V2P1
uniprot id: Q9SMX1
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by the presence of mitochondrial RNA.
messages: Belongs to the DExH box helicase family.
messages: Homodimer; in free form. Component of the mitochondrial degradosome (mtEXO) complex which is a heteropentamer containing 2 copies of SUPV3L1 and 3 copies of PNPT1.
messages: Major helicase player in mitochondrial RNA metabolism. Component of the mitochondrial degradosome (mtEXO) complex, that degrades 3' overhang double-stranded RNA with a 3'-to-5' directionality in an ATP-dependent manner. ATPase and ATP-dependent multisubstrate helicase, able to unwind double-stranded (ds) DNA and RNA, and RNA/DNA heteroduplexes in the 5'-to-3' direction. Plays a role in the RNA surveillance system in mitochondria; regulates the stability of mature mRNAs, the removal of aberrantly formed mRNAs and the rapid degradation of non coding processing intermediates (By similarity). Required during pollen development (PubMed:19237690).
messages: Mitochondrion matrix
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Variant nuclear number and positions (PubMed:15634699). Pollen development defective (PubMed:19237690).
messages: Weakly expressed.
messages: mitochondrion nucleoid

3702:AT1G63535
gene id: 3702:AT1G63535
uniprot id: Q2V4F6
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT4G30210
gene id: 3702:AT4G30210
uniprot id: A0A178USJ1
uniprot id: A0A1P8B3S1
uniprot id: Q9SUM3
names: Caution
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NADPH--cytochrome P450 reductase family.
messages: Binds 1 FAD per monomer.
messages: Binds 1 FMN per monomer.
messages: By wounding and transition from dark to light.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: In the N-terminal section; belongs to the flavodoxin family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May be due to a competing donor splice site.
messages: This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5.
messages: This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Reduces a variety of substrates in vitro, such as cytochrome c, feericyanide and dichloroindophenol.

3702:AT2G15910
gene id: 3702:AT2G15910
uniprot id: A0A384KVY1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02280
gene id: 3702:AT1G02280
uniprot id: A0A178W9C6
uniprot id: O23680
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. TOC34 subfamily.
messages: Binds 1 Mg(2+) ion by subunit.
messages: GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.
messages: GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis. Binds GTP, GDP, XTP, but not ATP. Probably specialized in the import of nuclear encoded photosynthetic preproteins from the cytoplasm to the chloroplast, especially during early development stages.
messages: Homodimer, heterodimer with TOC34 and TOC159, and monomer. The homodimerization and the dimerization with TOC159 require the binding of GTP on Arg-130, and a hypothetical coGAP factor. The dimeric form has a higher GTPase activity than the monomeric form. Part of the TOC core complex that includes 1 protein for the specific recognition of transit peptides surrounded by a ring composed of four proteins forming translocation channels, and four to five GTP-binding proteins providing energy. This core complex can interact with components of the TIC complex to form a larger import complex. Chloroplastic protein precursor such as prSS (precursor of the RuBisCO small subunit) interacts with these complexes. The TOC complex contains a specific subset of polar lipids such as digalactosyldiacylglyceride (DGDG), phosphatidylcholine (PC) and phosphatidylglycerol (PG). Interacts at least with TOC75-3. Forms large complexes including TOC33, pPORA and OEP161 during pPORA import into plastids at the plastid envelope membrane (PubMed:10998188, PubMed:12473690, PubMed:12951325, PubMed:15773849, PubMed:17337454, PubMed:18400179, PubMed:18541539). Interacts with SP1 (PubMed:23118188).
messages: Homodimer.
messages: Mostly expressed in photosynthetic tissues undergoing rapid growth. Observed in cotyledons and vascular tissues of hypocotyls of young seedling. In roots, restricted to apical and lateral meristems, and vascular bundles. In stems, mostly detected in the upper part. Expressed in young and middle-aged leaves. In flowers, confined to sepals.
messages: Mostly expressed in seedlings and flowers, and, to a lower extent, in roots, stems, and leaves.
messages: Phosphorylated by a kinase present in the outer envelope of chloroplast. When Ser-181 is phosphorylated, the binding to preprotein, GTP and GDP is inhibited, and thus, GTPase activity is repressed.
messages: Plants exhibits a pale yellowish phenotype.
messages: Up-regulated by CIA2 in leaves. Induced in light but repressed in darkness.
messages: chloroplast outer membrane

3702:AT1G55790
gene id: 3702:AT1G55790
uniprot id: F4I1X0
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT1G53730
gene id: 3702:AT1G53730
uniprot id: Q9C8M9
names: Disruption Phenotype
names: Domain
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cannot functionally replace STRUBBELIG.
messages: Expressed in seedlings, roots, stems, leaves, flowers and siliques.
messages: Membrane
messages: No visible phenotype.
messages: Over-expression of SRF6 induces no obvious phenotypes.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT4G15393
gene id: 3702:AT4G15393
uniprot id: A0A654FPJ5
uniprot id: A8MS53
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G19680
gene id: 3702:AT5G19680
uniprot id: Q84WJ9
names: Function
names: Subunit
messages: Inhibitor of protein-phosphatase 1 (PP1). Binds to and inhibits PP1 activity.
messages: Interacts with human protein phosphatase PPP1C.

3702:AT4G24900
gene id: 3702:AT4G24900
uniprot id: F4JRR5
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aborted seed development (PubMed:22991160). Embryos arrested at the globular to heart stage transition and defective endosperm development with multi-nucleolated endosperm cells (PubMed:22991160).
messages: Also present in cotyledons, hypocotyls, stems, veins of sepals and stigmas, and actively dividing tissues such as shoot apical meristem, root tips and emerging true leaves (PubMed:22991160). Weak expression in petals and anthers, and not detected in mature leaves (PubMed:22991160). In seeds, expressed in both the endosperm and embryo (PubMed:22991160).
messages: At least nine differentially spliced transcript isoforms are produced (Probable). Full-length isoforms, but not the truncated ones lacking the C-terminal domain, are able to rescue disruption mutants (PubMed:22991160) (Probable).
messages: Key regulator for endosperm and embryo nuclear divisions.
messages: Nucleus
messages: The C-terminus is essential for the function of the protein and it contains two conserved motifs (289-300) and (365-389) of unknown function present in orthologous proteins from various eukaryotes.

3702:AT5G16470
gene id: 3702:AT5G16470
uniprot id: A0A178UAW0
uniprot id: Q9FFD8
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Accumulates during senescence.
messages: Cytoplasm
messages: Nucleus
messages: Plants lacking both MBS1 and MBS2 exhibit premature leaf senescence.
messages: Required for acclimation to reactive oxygen species (ROS) responses downstream of beta-cyclocitral, including singlet oxygen 1O(2) detoxification reactions, especially upon light-mediated photooxidative stress, and leading to programmed cell death (By similarity). Prevents leaf senescence (PubMed:24151292).
messages: Stress granule

3702:AT1G22570
gene id: 3702:AT1G22570
uniprot id: A0A1P8AN07
uniprot id: Q9SK99
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in shoots, roots and leaves.
messages: Membrane

3702:AT5G16150
gene id: 3702:AT5G16150
uniprot id: Q56ZZ7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: May be involved in the efflux of glucose towards the cytosol.
messages: chloroplast inner membrane

3702:AT2G18180
gene id: 3702:AT2G18180
uniprot id: Q9SI13
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity).

3702:AT5G44560
gene id: 3702:AT5G44560
uniprot id: Q0WTY4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF7 family.
messages: Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity).
messages: Component of the endosomal sorting required for transport complex III (ESCRT-III), composed at least of VPS2, VPS20, VPS24 and VPS32 (By similarity). Interacts with CHMP1A, CHMP1B and VPS60-1 (PubMed:22010978).
messages: Endosome

3702:AT4G23630
gene id: 3702:AT4G23630
uniprot id: A0A178V247
uniprot id: Q9SUR3
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Interacts with VirB2.
messages: Membrane
messages: Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus.
messages: Predominantly expressed in root tissues.
messages: Shows reduced levels of Agrobacterium-mediated root transformation.
messages: Up-regulated after Agrobacterium infection.

3702:AT2G18790
gene id: 3702:AT2G18790
uniprot id: A0A178VXX1
uniprot id: A0A178W0V4
uniprot id: A0A384KZ81
uniprot id: P14713
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates progressively in maturating seeds to reach a peak in dry seeds (PubMed:23708772). Expressed upon seed imbibition (PubMed:23708772).
messages: Belongs to the phytochrome family.
messages: Contains one covalently linked phytochromobilin chromophore.
messages: Cytoplasm
messages: Expressed in fruits, flowers, leaves, stems, seedlings and roots.
messages: Homodimer (PubMed:24982198). Interacts with ADO1 and PKS4. Stabilized by interactions with PAPP5 and FYPP3 which are enhanced in the phosphorylated Pfr form. Interacts with VOZ1 and VOZ2 (PubMed:11260718, PubMed:12468726, PubMed:15707897, PubMed:18390804, PubMed:22904146). Binds, via its photosensory domain, to PTAC12/HMR/PAP5 when photoactivated; this interaction stimulates its localization to photobodies (PubMed:22895253). Interacts with CRY1 specifically when in the dark/far-red (Pr) state, but not when red light-activated (Pfr) (PubMed:22577138). Interacts with PIF4 and PIF5 in response to low blue light (LBL) (PubMed:26724867). Component of a red light-dependent nuclear complex made of PHL, PHYB and CO. Interacts directly with PHL (PubMed:24127609). Binds to UNE10/PIF8 when red light-activated (Pfr) (PubMed:31732705).
messages: Inactivation is proportional to temperature in the dark.
messages: Nucleus
messages: Nucleus speckle
messages: Reduced temperature responses in light (PubMed:30635559). In oop1, defects in circadian timing with altered phase; early timing of the peak (acrophase) of multiple circadian rhythms such as leaf movement, CO(2) assimilation and light-induced gene expression. Strong photoperception defect in red light leading to long hypocotyls; this phenotype is increased when blue lights are combined to red lights. Increased sensitivity to SO(2). Elongated internodes before the transition to flowering when grown in short day conditions.
messages: Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
messages: Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion. Involved in the flowering time regulation. Involved in light-regulated circadian phase control that triggers stomatal aperture, stomatal conductance, and CO(2) assimilation. Implicated in red light perception, and, to a lower extent, in blue light signaling (PubMed:12177480). Controls thermomorphogenesis in the daytime and regulates temperature responses by associating with the promoters of key target genes in a temperature-dependent manner and subsequently repressing their expression in a PIF4-dependent manner (temperature-responsive transcriptional regulator); this process requires PTAC12/HMR/PAP5 (transcriptional activator) (PubMed:27789797, PubMed:30635559). Thermal timer that integrates temperature information over the course of the night (PubMed:27789797). Detabilizes UNE10/PIF8 in red light (PubMed:31732705).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleoplasm

3702:AT5G14650
gene id: 3702:AT5G14650
uniprot id: A0A1P8BDY0
uniprot id: Q9LYJ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT3G20020
gene id: 3702:AT3G20020
uniprot id: A0A384KC56
uniprot id: Q08A71
names: Caution
names: Function
names: Similarity
messages: Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA).
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. PRMT6 subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G54410
gene id: 3702:AT5G54410
uniprot id: A0A178UB18
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G24150
gene id: 3702:AT5G24150
uniprot id: B9DFB1
uniprot id: F4KFQ9
uniprot id: O65404
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the squalene monooxygenase family.
messages: Catalyzes the stereospecific oxidation of squalene to (S)-2,3-epoxysqualene, and is considered to be a rate-limiting enzyme in steroid biosynthesis.
messages: Expressed in seedlings, leaves, stems and inflorescences. Detected in siliques.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: SEQ4 or SEQ5 are unable to complement seq1 mutants.

3702:AT3G56090
gene id: 3702:AT3G56090
uniprot id: A0A384KQ30
uniprot id: Q0WWR6
uniprot id: Q9LYN2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ferritin family.
messages: By iron overload treatment.
messages: Oligomer of 24 subunits. There are two types of subunits: L (light) chain and H (heavy) chain. The major chain can be light or heavy, depending on the species and tissue type. The functional molecule forms a roughly spherical shell with a diameter of 12 nm and contains a central cavity into which the insoluble mineral iron core is deposited (By similarity).
messages: Oligomer of 24 subunits. There are two types of subunits: L (light) chain and H (heavy) chain. The major chain can be light or heavy, depending on the species and tissue type. The functional molecule forms a roughly spherical shell with a diameter of 12 nm and contains a central cavity into which the insoluble mineral iron core is deposited.
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (By similarity).
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
messages: chloroplast

3702:AT1G67170
gene id: 3702:AT1G67170
uniprot id: A0A178WGE5
uniprot id: Q84TD8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the FLX family.
messages: Has no transcriptional activation activity.
messages: Interacts with FRI.
messages: No suppression of FRI activity.

3702:AT4G04695
gene id: 3702:AT4G04695
uniprot id: Q9S9V0
names: Activity Regulation
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Early induced by salicylic acid (SA) treatment.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (295-325) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT2G23790
gene id: 3702:AT2G23790
uniprot id: O64823
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCU (TC 1.A.77) family.
messages: Mitochondrial inner membrane calcium uniporter that mediates calcium uptake into mitochondria. Constitutes a pore-forming and calcium-conducting subunit. Mitochondrial calcium homeostasis plays key roles in cellular physiology and regulates cell bioenergetics, cytoplasmic calcium signals and activation of cell death pathways.
messages: Mitochondrion inner membrane

3702:AT5G05380
gene id: 3702:AT5G05380
uniprot id: A0A178UKZ4
uniprot id: A0A1P8B9G8
uniprot id: A0A1P8B9H5
uniprot id: A0A1P8B9I5
uniprot id: A0A7G2F8P3
uniprot id: Q9FLB6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PRA1 family.
messages: Endosome membrane
messages: Expressed in hypocotyls and shoot apex.
messages: Interacts with PRA1B1, PRA1B2, PRA1B4, PRA1B5, PRA1B6 and PRA1E.
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G03520
gene id: 3702:AT4G03520
uniprot id: Q9SEU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioredoxin family. Plant M-type subfamily.
messages: Interacts with G6PD1 and G6PD4 (PubMed:21309870). Interacts with PGL3 (PubMed:24008768).
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. May activate NADP-malate dehydrogenase.
messages: chloroplast stroma

3702:AT4G22120
gene id: 3702:AT4G22120
uniprot id: A0A654FRM3
uniprot id: Q5XEZ5
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by hyperosmotic shock after mannitol or NaCl treatment (PubMed:24503647). Activated by mechanical pressure (PubMed:30382939).
messages: Acts as an osmosensitive calcium-permeable cation channel (PubMed:24503647, PubMed:30382939). Specifically conducts cations including Ca(2+), K(+) and Na(+) in vitro. Inactivation or closure of the channel is calcium-dependent (PubMed:24503647). Mechanosensitive ion channel that converts mechanical stimuli into a flow of ions (PubMed:30382939).
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Homodimer.
messages: Membrane

3702:AT5G10625
gene id: 3702:AT5G10625
uniprot id: A0A178UCF2
uniprot id: Q9LXB5
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the FPF1 family.
messages: Expressed in leaves and in some parts of the flowers, mainly in the sepals.
messages: Modulates the competence to flowering of apical meristems.
messages: Overexpression of FLP2 results in shortening of the time to flowering.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G18340
gene id: 3702:AT5G18340
uniprot id: Q3E9F5
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT3G57040
gene id: 3702:AT3G57040
uniprot id: O80366
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARR family. Type-A subfamily.
messages: Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.
messages: Interacts with AHP1 and AHP3.
messages: Nucleus
messages: Predominantly expressed in roots.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT1G18710
gene id: 3702:AT1G18710
uniprot id: A0A178W4W9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G26580
gene id: 3702:AT2G26580
uniprot id: A0A178VPK4
uniprot id: Q8GW46
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the YABBY family.
messages: Binds to LUG and LUH; these complexes promote adaxial cell identity in leaves as well as embryonic shoot apical meristem (SAM) initiation and postembryonic SAM maintenance. Interacts with SPL/NZZ and SPEAR2 (PubMed:25527103).
messages: Leaves polarity and growth defects.
messages: Nucleus
messages: Promotes adaxial cell identity. Regulates the initiation of embryonic shoot apical meristem (SAM) development.

3702:AT5G39220
gene id: 3702:AT5G39220
uniprot id: Q84JL7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily.
messages: Hydrolase involved in tocopherol (vitamin E) biosynthesis (PubMed:35639691). Releases prenyl alcohols from chlorophyll biosynthetic intermediates, which are then converted to the corresponding diphosphates for tocopherol biosynthesis (PubMed:35639691). Provides most of the phytol from chlorophyll for tocopherol biosynthesis in seeds (PubMed:35639691).
messages: Stong decrease of tocopherol (vitamin E) content in seeds.
messages: chloroplast envelope

3702:AT2G47020
gene id: 3702:AT2G47020
uniprot id: A0A1P8AYP4
uniprot id: A0A1P8AYS2
uniprot id: A0A1P8AYU8
uniprot id: A2RVR7
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the prokaryotic/mitochondrial release factor family.
messages: Methylation increases the termination efficiency of RF1.
messages: Mitochondrion
messages: Mostly expressed in seedlings, stems and adult plants, and, to a lower extent, in siliques (PubMed:17450416). Barely detected in etiolated seedlings and roots (PubMed:17450416).
messages: Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA in mitochondria.

3702:AT2G04030
gene id: 3702:AT2G04030
uniprot id: A0A178VPV7
uniprot id: Q9SIF2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the heat shock protein 90 family.
messages: By heat shock and light.
messages: During embryogenesis, highly expressed at 4 days post anthesis.
messages: Embryonic lethality due to embryo development arrest at the heart stage.
messages: Expressed in roots, cotyledons, young leaves, mature leaves, stems, flowers, petals and siliques.
messages: Homodimer (PubMed:25216779). Interacts with VIPP1 (PubMed:23875936). Interacts with P23-1 (PubMed:20493581).
messages: Molecular chaperone required for chloroplast biogenesis (PubMed:12943545, PubMed:25216779). Essential for chloroplast biogenesis and maintenance, and thus for embryogenesis (PubMed:23875936, PubMed:23382192). May be involved in the disassembly of VIPP1 for thylakoid membrane formation and/or maintenance (PubMed:23875936). Cooperates with TIC components and other molecular chaperones to drive transport of preproteins into chloroplasts and functions in the chloroplast stroma to facilitate membrane translocation during protein import into the organelle (PubMed:23382192).
messages: Plants over-expressing HSP90.7 show albino and stunted leaves.
messages: chloroplast stroma

3702:AT5G45440
gene id: 3702:AT5G45440
uniprot id: Q9FHJ2
names: Caution
names: Function
messages: Although strongly related to the NB-LRR family, it is shorter and lacks the LRR repeats that are present in other proteins of the family.
messages: Possible disease resistance protein.

3702:AT1G73040
gene id: 3702:AT1G73040
uniprot id: A0A178WMS9
uniprot id: Q9SSM3
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT3G20210
gene id: 3702:AT3G20210
uniprot id: A0A178VB13
uniprot id: Q9LJX8
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Asparagine-specific endopeptidase that may be involved in processing of proteins targeted to vacuoles (By similarity). Probably involved in post-translational proteolysis of seed storage proteins in the protein storage vacuole of developing seeds (PubMed:12417707, PubMed:14688293). Exhibits a caspase-1-like activity in extracellular granules. At the early stage of seed development, required for the formation of the seed coat, by regulating cell death of specific cell layers in inner integument (PubMed:15705955).
messages: Auto-catalytic activation.
messages: Belongs to the peptidase C13 family.
messages: No macroscopic phenotype, probably due to functional redundancy (PubMed:12417707, PubMed:14688293). In plants lacking all vacuolar-processing enzyme isozymes (e.g. alpha, beta, gamma and delta) shift of storage protein accumulation from normally processed polypeptides to a finite number of prominent alternatively processed polypeptides cleaved at sites other than the conserved Asn residues targeted by VPE (PubMed:14688293). Delayed cell death of the two layers of the seed coat (PubMed:15705955).
messages: Seed specific. Restricted to developing seeds at 7 days after anthesis, and, at lower levels, detected in flowers (PubMed:12417707, PubMed:14688293). Detected in siliques, specifically in seed coats (at protein level) (PubMed:15705955).
messages: Specifically and transiently expressed in two cell layers of the seed coat (ii2 and ii3) at an early stage of seed development (at protein level).
messages: Strongly inhibited by biotin-YVAD-fmk (a caspase-1 inhibitor) and by Ac-DEVD-fmk.
messages: Vacuole
messages: cell wall
messages: extracellular space

3702:AT5G14210
gene id: 3702:AT5G14210
uniprot id: A0A384KDD9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G47420
gene id: 3702:AT3G47420
uniprot id: Q9C5L3
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
messages: By inorganic phosphate (Pi) starvation.
messages: Membrane

3702:AT1G30870
gene id: 3702:AT1G30870
uniprot id: Q9SY33
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT5G14950
gene id: 3702:AT5G14950
uniprot id: Q9LFR0
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycosyl hydrolase 38 family.
messages: Binds 1 zinc ion per subunit. Not sensitive to EDTA and not significantly stimulated by cations such as Ca(2+), Co(2+), Mn(2+), Ni(2+) or Zn(2+) (PubMed:16460512).
messages: Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway. Converts GlcNAcMan(5)GlcNAc(2) (Man5Gn) into GlcNAcMan(3)GlcNAc(2) (MGn) by sequential removal of two alpha1,6- and alpha1,3-linked mannose residues from the alpha1,6-mannose branch of the substrate. To a lesser extent, also able to cleave beta1,2-xylosylated Man5Gn-glycopeptide (Man5GnX-GP) and pyridylaminated substrates Man5Gn-PA and Man5GnX-PA, but not active toward Man5-glycopeptide (PubMed:16460512, PubMed:21478158). Required for resistance to salt stress (PubMed:18408158).
messages: Glycosylated.
messages: Golgi apparatus membrane
messages: Homodimer; disulfide-linked (By similarity). Interacts with GALT1 (PubMed:23400704).
messages: Inhibited by 1 mM Cu(2+) and by the class II alpha-mannosidase inhibitor swainsonine.
messages: Predominant presence of unprocessed hybrid N-glycans (PubMed:16460512). Reduced levels of glycoprotein N-glycans (PubMed:21478158). Increased sensitivity to salt stress (PubMed:18408158).

3702:AT3G06680
gene id: 3702:AT3G06680
uniprot id: A0A654F662
uniprot id: F4JC32
uniprot id: Q84WM0
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL29 family.

3702:AT1G28670
gene id: 3702:AT1G28670
uniprot id: Q38894
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT5G51830
gene id: 3702:AT5G51830
uniprot id: A0A178UAE0
uniprot id: Q9FLH8
names: Function
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.
messages: May play an important role in maintaining the flux of carbon towards starch formation.

3702:AT5G10610
gene id: 3702:AT5G10610
uniprot id: Q9LXB3
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G35000
gene id: 3702:AT4G35000
uniprot id: A0A5S9XYP8
uniprot id: Q42564
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds one cation per subunit; probably K(+), but might also be Ca(2+).
messages: Glyoxysome membrane
messages: Interacts via its C-terminal region with AKR2A and AKR2B.
messages: Peroxisome membrane
messages: Plays a key role in hydrogen peroxide removal.
messages: The transmembrane plays critical roles in migration to the peroxisome and/or subsequent insertion into the membrane.

3702:AT1G73910
gene id: 3702:AT1G73910
uniprot id: Q9C9B2
names: Similarity
names: Tissue Specificity
messages: Belongs to the actin family. ARP4 subfamily.
messages: Expressed in roots, leaves and flowers.

3702:AT5G27960
gene id: 3702:AT5G27960
uniprot id: Q7XJK5
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with AGL62.
messages: Nucleus
messages: Probable transcription factor.

3702:AT1G61570
gene id: 3702:AT1G61570
uniprot id: A0A178WLR5
uniprot id: Q9XH48
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the small Tim family.
messages: Expressed in roots, flowers, young cotyledons and leaves.
messages: Heterohexamer.
messages: Heterohexamer; composed of 3 copies of TIM8 and 3 copies of TIM13, named soluble 70 kDa complex. Associates with the TIM22 complex, whose core is composed of TIM22 (By similarity).
messages: Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space.
messages: Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The TIM8-TIM13 complex mediates the import of some proteins while the predominant TIM9-TIM10 70 kDa complex mediates the import of much more proteins (By similarity).
messages: Mitochondrion inner membrane
messages: Mitochondrion intermembrane space
messages: The twin CX3C motif contains 4 conserved Cys residues that form 2 disulfide bonds in the mitochondrial intermembrane space.
messages: The twin CX3C motif contains 4 conserved Cys residues that form 2 disulfide bonds in the mitochondrial intermembrane space. However, during the transit of TIM13 from cytoplasm into mitochondrion, the Cys residues probably coordinate zinc, thereby preventing folding and allowing its transfer across mitochondrial outer membrane (By similarity).

3702:AT4G09030
gene id: 3702:AT4G09030
uniprot id: A0A5S9XQN2
uniprot id: Q9M0S4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: Membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Predominantly expressed in flowers and at a lower level in roots and siliques.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT3G19270
gene id: 3702:AT3G19270
uniprot id: A0A178VA28
uniprot id: A0A2H1ZEH7
uniprot id: Q9LJK2
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By abscisic acid, dehydration and rehydration.
messages: Involved in the oxidative degradation of abscisic acid, but not in the isomerization of the produced 8'-hydroxyabscisic acid (8'-OH-ABA) to (-)-phaseic acid (PA).
messages: Mainly expressed in flowers. Lower expression in siliques, rosette leaves, roots and stems. Not expressed in dry seeds. Expressed in silique envelopes, but not in embryo or endosperm during the seed development.
messages: Membrane
messages: Not induced after imbibition.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G25810
gene id: 3702:AT2G25810
uniprot id: A0A178VQH3
uniprot id: O82316
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. Transports urea in yeast cells in a pH-independent manner.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
messages: Expressed in roots.
messages: Membrane
messages: Starts to be expressed in seedlings from 2 days ays after germination.
messages: Vacuole membrane

3702:AT5G45720
gene id: 3702:AT5G45720
uniprot id: F4KEL9
uniprot id: F4KEM0
names: Sequence Caution
names: Similarity
messages: Belongs to the DnaX/STICHEL family.
messages: Sequencing errors.
messages: Wrong choice of frame.

3702:AT1G64740
gene id: 3702:AT1G64740
uniprot id: A0A178WLQ0
uniprot id: P11139
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are six genes coding for alpha-tubulin.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively.
messages: cytoskeleton

3702:AT5G37930
gene id: 3702:AT5G37930
uniprot id: Q84K34
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT3G50000
gene id: 3702:AT3G50000
uniprot id: Q08466
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CK2 subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates (By similarity). The alpha chain contains the catalytic site. The tetrameric holoenzyme CK2, composed of two alpha and two beta subunits, phosphorylates the transcription factor PIF1 after an exposure to light, resulting in a proteasome-dependent degradation of PIF1 and promotion of photomorphogenesis (PubMed:21330376). CK2 phosphorylates translation initiation factors. May participate in the regulation of the initiation of translation (PubMed:19509278). Acts as circadian clock component that maintains the correct period length through phosphorylation of CCA1 (PubMed:21900482). May act as an ectokinase that phosphorylates several extracellular proteins.
messages: Heterotetramer of two catalytic alpha subunits and two regulatory beta subunits.
messages: No visible phenotype under normal growth conditions, but the triple mutant cka1, cka2 and cka3 show altered circadian rhythms and delayed flowering under long day conditions.
messages: Nucleus
messages: Seems to be present in all plant organs. But seems to be more expressed than CKA1.
messages: nucleolus

3702:AT1G50500
gene id: 3702:AT1G50500
uniprot id: A0A1P8ATX5
uniprot id: A0A1P8ATZ0
uniprot id: A0A5S9WKR6
uniprot id: Q0WQF4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi (By similarity). Required for vesicle trafficking involved in plasma membrane protein composition. Probably involved in pollen tube elongation and other polar growth. Confers basal tolerance to long-term heat stress and osmotic stress, by acclimation of the plasma membrane.
messages: Belongs to the VPS53 family.
messages: Component of the Golgi-associated retrograde protein (GARP) complex, composed by VPS52, VPS53 and VPS54. Interacts directly with VPS52 and VPS54.
messages: Cytoplasm
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Lethal when homozygous. In hemizygous plants, male-specific transmission defect.
messages: Membrane
messages: Present in pollen. Mostly expressed in vegetative tissues, including leaves, siliques, and stems, and flower buds, and, at lower levels, in roots and mature flowers.
messages: trans-Golgi network membrane

3702:AT4G27300
gene id: 3702:AT4G27300
uniprot id: O81833
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with PUB9, PUB13 and PUB14.

3702:AT1G44180
gene id: 3702:AT1G44180
uniprot id: Q9C6Y8
names: Cofactor
messages: Binds 2 Zn(2+) ions per subunit.

3702:AT5G54690
gene id: 3702:AT5G54690
uniprot id: A0A5S9YE23
uniprot id: Q9FH36
uniprot id: W8QN47
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 8 family.
messages: Golgi apparatus membrane
messages: Highly expressed in stems. Detected in roots, inflorescences, siliques, and leaves. Expressed in cells undergoing secondary wall thickening, including interfascicular fibers and primary and secondary xylem.
messages: Involved in pectin assembly and/or distribution, and in the synthesis of secondary wall glucuronoxylan. Probably involved in the synthesis of the glycosyl sequence at the glucuronoxylan reducing end. May be involved in synthesis of a complex glycan primer for xylan synthesis.
messages: Severe dwarfing and seedling lethality. Collapsed xylem vessels. Reduced glucuronoxylan and homogalacturonan content in cell wall.

3702:AT5G44565
gene id: 3702:AT5G44565
uniprot id: Q3E8H4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates upon infection by generalist herbivores such as Spodoptera littoralis.
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation.
messages: Cell membrane
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: Mostly expressed in leaves and flowers, and, to a lower extent, in seedlings shoots.
messages: apoplast

3702:AT3G07410
gene id: 3702:AT3G07410
uniprot id: Q9SRS5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT3G20730
gene id: 3702:AT3G20730
uniprot id: Q9LT48
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT5G20180
gene id: 3702:AT5G20180
uniprot id: A0A384LN24
uniprot id: Q8W464
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

3702:AT5G15180
gene id: 3702:AT5G15180
uniprot id: A0A384LES0
uniprot id: Q0WR91
uniprot id: Q9LXG3
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT2G25770
gene id: 3702:AT2G25770
uniprot id: A0A178VUC0
uniprot id: O82320
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Membrane

3702:AT3G43630
gene id: 3702:AT3G43630
uniprot id: A0A5S9XHM0
uniprot id: Q9M2C3
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CCC1 family.
messages: Induced by iron supply.
messages: Membrane
messages: No visible phenotype under normal growth condition, but decreased accumulation of iron in the root and increased accumulation in the shoot when grown under high iron concentration.
messages: Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.
messages: Vacuole membrane

3702:AT4G15880
gene id: 3702:AT4G15880
uniprot id: A0A1P8B4F2
uniprot id: Q94F30
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase C48 family.
messages: Early flowering under both long and short days and pleiotropic alterations in shoot development.
messages: Expressed in seedlings, leaves, shoots, flowers and roots.
messages: Inhibited by thiol reagent and N-ethylmaleimide, but not by ubiquitin aldehyde, pepstatin A or benzamidine HCl.
messages: Interacts with NUA (via N-terminus). Interacts with KIN10 (PubMed:20855607).
messages: No circadian regulation.
messages: Nucleus membrane
messages: Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Acts predominantly as an isopeptidase, cleaving SUMO-conjugated proteins better than SUMO peptides. Plays an important role in the control of flowering time.
messages: The N-terminal regulatory domain is required for peptidase activity in vitro.

3702:AT1G47640
gene id: 3702:AT1G47640
uniprot id: A0A178WKH7
uniprot id: Q9SX96
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM147 family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G54067
gene id: 3702:AT5G54067
uniprot id: Q3E7N5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G15770
gene id: 3702:AT4G15770
uniprot id: A0A654FPL9
uniprot id: Q6NM52
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NIP7 family.
messages: Interacts with pre-ribosome complex.
messages: Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.
messages: nucleolus

3702:AT1G10610
gene id: 3702:AT1G10610
uniprot id: A0A178WLS1
uniprot id: A0A1P8ARJ8
uniprot id: A0A1P8ARK0
uniprot id: Q0WNR2
names: Caution
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G29290
gene id: 3702:AT1G29290
uniprot id: Q52K95
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the C-terminally encoded plant signaling peptide (CEP) family.
messages: Extracellular signaling peptide that may regulate primary root growth rate and systemic nitrogen (N)-demand signaling.
messages: Interacts with CEP receptors (e.g. CEPR1 and CEPR2).
messages: Slightly repressed in roots by carbon dioxide CO(2). Induced in shoots by osmotic stress (e.g. mannitol).
messages: The mature small signaling peptide is generated by proteolytic processing of the longer precursor.
messages: apoplast

3702:AT1G27220
gene id: 3702:AT1G27220
uniprot id: A0A178WEW4
uniprot id: F4HR59
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G45430
gene id: 3702:AT3G45430
uniprot id: Q9M1G4
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.

3702:AT3G49720
gene id: 3702:AT3G49720
uniprot id: Q9M2Y6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Plants lacking both CGR2 and CGR3 (cgr2-1 cgr3-1) exihibit severe defects in plant growth and development (e.g. shorter hypocotyl and primary root length due to reduced cell elongation, and abnormal pollen tube elongation), as well as reduced levels of pectin methylesterification associated with decreased microsomal pectin methyltransferase activity. The double mutant cgr2-1 cgr3-1 also lacks uronic acids and methyl ester (PubMed:25704846). Reduced HG methylesterification in cgr2-1 cgr3-1 double mutant results in thin but dense leaf mesophyll that limits CO(2) diffusion to chloroplasts and reduces leaf area, thus impairing photosynthesis efficiency and carbon (C) partitioning (PubMed:27208234).
messages: Together with CGR3, required for homogalacturonan pectins (HG) methylesterification in the Golgi apparatus prior to integration into cell walls, essential for general growth and development (PubMed:25704846, PubMed:27208234). Promotes rosette growth (PubMed:25704846). Impacts carbon (C) partitioning, photosynthesis and respiration efficiency by influencing leaf mesophyll cell walls morphology and physiology; pectin methylesterification modulates both expansion and positioning of cells in leaves, probably by changing cell walls plasticity (PubMed:27208234).

3702:AT1G23740
gene id: 3702:AT1G23740
uniprot id: A0A654ECJ1
uniprot id: Q9ZUC1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
messages: No visible phenotype under normal conditions, but enhanced susceptibility to methyl viologen.
messages: Reduces the double bond in short-chain unsaturated carbonyls (PubMed:21169366). Acts preferentially on alpha,beta-unsaturated ketones rather on alpha,beta-unsaturated aldehydes (PubMed:21169366). Has no activity with (E)-2-hexenal and (E)-2-pentenal (PubMed:21169366). Contributes to detoxify stromal reactive carbonyls produced under oxidative stress (PubMed:22575657).
messages: chloroplast

3702:AT1G63800
gene id: 3702:AT1G63800
uniprot id: A0A178WDU0
uniprot id: A0A1P8ART3
uniprot id: P42749
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Expressed in developing ovules, but not in vascular tissues.
messages: Not induced by heat shock.

3702:AT1G23870
gene id: 3702:AT1G23870
uniprot id: Q9LRA7
uniprot id: W8QP88
names: Similarity
messages: In the C-terminal section; belongs to the trehalose phosphatase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 20 family.

3702:AT2G04080
gene id: 3702:AT2G04080
uniprot id: A0A1P8B0Y4
uniprot id: Q8GXM8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT1G64150
gene id: 3702:AT1G64150
uniprot id: A0A178WB27
uniprot id: Q94AX5
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GDT1 family.
messages: Defects in photosynthesis and reduced growth rate (PubMed:27302341, PubMed:27020959). Pale yellow leaves with reduced PSII activity (PubMed:27302341). Altered Ca(2+) and Mn(2+) partitioning in chloroplasts and reduced Mn(2+) binding to PSII (PubMed:27020959).
messages: Homodimer.
messages: Membrane
messages: Mn(2+)/H(+) exchanger, which transport Mn(2+)from the chloroplast stroma into the acidic thylakoid lumen (PubMed:27020959). Might be a chloroplast-localized Ca(2+)/H(+) antiporter (PubMed:27302341). Regulates Ca(2+), Mn(2+) and pH homeostasis (PubMed:27302341). Required for chloroplast development (PubMed:27302341).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Thylakoid
messages: chloroplast membrane

3702:AT4G24170
gene id: 3702:AT4G24170
uniprot id: A0A5S9XVC0
uniprot id: F4JQ51
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.

3702:AT5G47470
gene id: 3702:AT5G47470
uniprot id: A0A1P8BC85
uniprot id: A0A1P8BC99
uniprot id: Q9FGL0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT5G12210
gene id: 3702:AT5G12210
uniprot id: A0A178UAX0
uniprot id: A0A178UCS2
uniprot id: F4JZH8
uniprot id: Q84J75
names: Activity Regulation
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein prenyltransferase subunit beta family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2 (PubMed:26589801). Involved in the geranylgeranylation of RABA2A (PubMed:20180921). In vitro, can prenylate PGGTI targets with the C-terminal sequence Cys-aliphatic-aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the beta subunit is associated with the alpha subunit RGTA1 (PubMed:26589801).
messages: Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX.
messages: Heterotrimer composed of the alpha subunit RGTA, the beta subunit RGTB and REP; within this trimer, RGTA and RGTB form the catalytic component, while REP mediates peptide substrate binding.
messages: Pleiotropic effects on plant growth and development, including dwarf size, aberrant root development, multiple inflorescence stems and small siliques mostly sterile. Impaired shoot gravitropism and photomorphogenesis (PubMed:20180921). The double mutant plants rgtb1 and rgtb2 are male sterile, due to shrunken pollen with abnormal exine structure, and strong disorganization of the endoplasmic reticulum membranes (PubMed:25316062).
messages: Required for male fertility and root tip growth.
messages: The enzymatic reaction requires the aid of the Rab escort protein REP.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G62700
gene id: 3702:AT1G62700
uniprot id: F4HYV5
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant vascular related NAC-domain protein family.
messages: Detected in root vessels of protoxylems, outermost metaxylems, inner metaxylems, shoots and hypocotyls. Expressed in roots, hypocotyls, cotyledons and leaves (PubMed:18445131). Expressed in developing xylems (PubMed:16103214, PubMed:17565617). Specifically expressed in vessels in the secondary xylem of the root-hypocotyl region, and in vessels but not in interfascicular fibers in stems (PubMed:25148240).
messages: Interacts with NAC083/VNI2.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:25148240).
messages: Up-regulated during xylem vessel element formation. Expressed preferentially in procambial cells adjacent to root meristem.

3702:AT2G38860
gene id: 3702:AT2G38860
uniprot id: A0A654F034
uniprot id: B3H6C6
uniprot id: Q9ZV19
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase C56 family.
messages: By ethylene, abscisic acid (ABA) and dark.
messages: Expressed in roots and cauline leaves.
messages: Homotrimer.
messages: May be involved in oxidative stress response.
messages: Up-regulated in leaves during natural senescence.

3702:AT5G47520
gene id: 3702:AT5G47520
uniprot id: Q9FGK5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT3G15490
gene id: 3702:AT3G15490
uniprot id: A0A384LHH4
uniprot id: Q4PSP2
names: Caution
names: Similarity
messages: Belongs to the IST1 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G11810
gene id: 3702:AT4G11810
uniprot id: A0A1P8B5Q1
uniprot id: Q9T050
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily.
messages: Membrane

3702:AT5G53040
gene id: 3702:AT5G53040
uniprot id: A0A178UBS5
uniprot id: Q9LVU8
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Putative transcription factor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G15354
gene id: 3702:AT3G15354
uniprot id: A0A178VH25
uniprot id: Q9LJR3
names: Caution
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with COP1 and CO.
messages: Nucleus
messages: Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex.
messages: The protein kinase domain is predicted to be catalytically inactive. The DWD box is required for interaction with DDB1A (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by red, far-red and blue light.

3702:AT3G48480
gene id: 3702:AT3G48480
uniprot id: A0A654FFV9
uniprot id: F4JF18
names: Similarity
messages: Belongs to the peptidase C48 family.

3702:AT1G78910
gene id: 3702:AT1G78910
uniprot id: Q5XET6
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pseudouridine synthase RluA family.
messages: May be due to a competing acceptor splice site.
messages: Mitochondrion

3702:AT1G49435
gene id: 3702:AT1G49435
uniprot id: A0A654EM19
uniprot id: A7REF6
uniprot id: P82731
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G43240
gene id: 3702:AT2G43240
uniprot id: Q8GY97
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleotide-sugar transporter family. CMP-Sialate:CMP antiporter (TC 2.A.7.12) subfamily.
messages: Golgi apparatus membrane
messages: Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

3702:AT4G21510
gene id: 3702:AT4G21510
uniprot id: O65416
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT2G18770
gene id: 3702:AT2G18770
uniprot id: A0A178VQQ0
uniprot id: A0A1P8AY88
uniprot id: Q9ZV42
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SRP receptor beta subunit family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G58870
gene id: 3702:AT5G58870
uniprot id: A0A178UAY0
uniprot id: Q9FIM2
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Binds 1 zinc ion per subunit.
messages: By high light.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the N-terminal section; belongs to the AAA ATPase family.
messages: Probable ATP-dependent zinc metallopeptidase.
messages: chloroplast thylakoid membrane

3702:AT3G09840
gene id: 3702:AT3G09840
uniprot id: P54609
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AAA ATPase family.
messages: Cell membrane
messages: Highly expressed in the proliferating cells of the vegetative shoot, root, floral inflorescence and flowers, and in rapidly growing cells.
messages: Homohexamer (PubMed:15498773, PubMed:17190830). Interacts with SERK1, GRF6, KAPP and SYP31, but not with KNOLLE. Component of the SERK1 signaling complex, composed of KAPP, CDC48A, GRF6 or GRF7, SERK1, SERK2, SERK3/BAK1 and BRI1 (PubMed:12427991, PubMed:15592873, PubMed:16621602, PubMed:17693538, PubMed:23747397). Interacts with PUX1, PUX2, PUX3, PUX4, PUX5, PUX7 and PUX11 via its N-terminus (PubMed:15498773, Ref.7, PubMed:17190830).
messages: Nucleus
messages: Phosphorylated on at least one threonine residue and on Ser-41 by SERK1.
messages: Probably functions in cell division and growth processes. Interacts with certain SNAREs as part of specialized membrane fusion events where vesicles from the same organelle fuse (homotypic fusion) (By similarity).
messages: phragmoplast

3702:AT1G17790
gene id: 3702:AT1G17790
uniprot id: Q8H1D7
names: Domain
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with SIZ1 (via PHD domain).
messages: Sumoylated by SIZ1.
messages: The NET domain could serve as an interface to localize different proteins or complexes to chromatin.
messages: chloroplast

3702:AT1G55910
gene id: 3702:AT1G55910
uniprot id: Q94EG9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZIP transporter (TC 2.A.5) family.
messages: Cell membrane
messages: Probably mediates zinc uptake from the rhizosphere.

3702:AT4G12910
gene id: 3702:AT4G12910
uniprot id: A0A1P8B894
uniprot id: Q8L7B2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Probable carboxypeptidase.
messages: Secreted
messages: Ubiquitous.

3702:AT3G57680
gene id: 3702:AT3G57680
uniprot id: A0A1I9LQZ2
uniprot id: A0A654FIR0
uniprot id: F4J3G5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S41A family.
messages: Protease involved in the C-terminal processing of the chloroplastic D1 protein of photosystem II. This proteolytic processing is necessary to allow the light-driven assembly of the tetranuclear manganese cluster, which is responsible for photosynthetic water oxidation.
messages: chloroplast thylakoid lumen

3702:AT4G36690
gene id: 3702:AT4G36690
uniprot id: A0A178UVY6
uniprot id: A0A178UXU1
uniprot id: A0A178UYD2
uniprot id: F4JQG2
uniprot id: O23212
names: Caution
names: Domain
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family.
messages: Component of the spliceosome (Probable). Interacts with SUA (PubMed:20525852). Interacts with SF1 in the nucleus (PubMed:24580679).
messages: May be due to a competing acceptor splice site.
messages: May be due to intron retention.
messages: N-terminal RS domain has a very strong bias in favor of D over S.
messages: Necessary for the splicing of pre-mRNA.
messages: Nucleus
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G02980
gene id: 3702:AT2G02980
uniprot id: Q8LK93
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Involved in RNA editing event in chloroplasts. Required for the editing of a single site in ndhD transcript, which is a plastid-encoded subunits of the chloroplast NAD(P)H dehydrogenase (NDH) complex. Not essential for the activity of the NDH complex of the photosynthetic electron transport chain.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT3G12270
gene id: 3702:AT3G12270
uniprot id: A0A654FBM1
uniprot id: Q0WVD6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
messages: Cytoplasm
messages: Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins.
messages: The zinc-finger is responsible for substrate specificity.

3702:AT4G01550
gene id: 3702:AT4G01550
uniprot id: Q9M126
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: By salt stress and abscisic acid (ABA) in roots.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants mutant exhibit reduced sensitivity to high salinity during seed germination and seedling development.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Involved in salt stress response during seed germination and seedling growth. Binds the auxin-responsive IAA30 gene promoter and may serve as a molecular link that interconnects a developmental feedback loop of auxin signaling with a salt signal transduction pathway during seed germination (PubMed:21450938).

3702:AT3G15800
gene id: 3702:AT3G15800
uniprot id: A0A384KSQ3
uniprot id: F4J030
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT4G20670
gene id: 3702:AT4G20670
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G53940
gene id: 3702:AT1G53940
uniprot id: Q9SYF0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Expressed seedlings, roots and stems.
messages: In glip2, enhanced auxin responses, and higher susceptibility to E.carotovora.
messages: In roots, by salicylic acid (SA), jasmonic acid (JA), and ethylene (ET) treatments.
messages: Involved in the resistance to the necrotropic bacteria Erwinia carotovora, probably via negative regulation of auxin signaling. Possesses lipase and antimicrobial activities, inhibiting germination of fungal spores (e.g. Alternaria brassicicola).
messages: Secreted

3702:AT1G72930
gene id: 3702:AT1G72930
uniprot id: Q9SSN3
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth (By similarity).
messages: In some plant proteins and in human SARM1, the TIR domain has NAD(+) hydrolase (NADase) activity (By similarity). However, despite the presence of the catalytic Asp residue, the isolated TIR domain of human TLR4 lacks NADase activity (By similarity). Based on this, it is unlikely that Toll-like receptors have NADase activity.
messages: Interacts with MED37E.
messages: Mostly present in shoots.

3702:AT1G21250
gene id: 3702:AT1G21250
uniprot id: Q39191
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Binding to polygalacturonic acid (PGA) multimers is calcium-dependent.
messages: Expressed in shoot and root apical meristems, and in expanding leaves and sepals.
messages: Induced by salicylic acid (SA) or INA, methyl jasmonate, ethylene, wounding and pathogen infection. Accumulated in roots after Aluminum exposure. Up-regulated by GRP3.
messages: Interacts with the glycine-rich proteins GRP3 and GRP3S, and the type 2C protein phosphatase KAPP. Component of a 500 kDa complex, composed of WAK1, GRP3 and KAPP. Interacts with the oxygen-evolving enhancer protein 2 (OEE2).
messages: Membrane
messages: Predominantly expressed in green tissues such as stems and leaves. Detected at organ junctions.
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development. Required during plant's response to pathogen infection and in plant defense against heavy metal toxicity. Phosphorylates the oxygen-evolving enhancer protein 2 (OEE2) in an GRP-3-dependent manner.

3702:AT5G47850
gene id: 3702:AT5G47850
uniprot id: Q9FIJ6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed in roots, leaves, especially in trichomes, shoot apical meristems (SAM), and, to a lower extent, in floral buds.
messages: Homodimer.
messages: Membrane

3702:AT3G16710
gene id: 3702:AT3G16710
uniprot id: Q9LUR2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT2G36630
gene id: 3702:AT2G36630
uniprot id: Q8S9J0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Membrane

3702:AT5G63610
gene id: 3702:AT5G63610
uniprot id: A0A178U8W4
uniprot id: Q84TI6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Expressed in roots, leaves and stems. Expressed in young dividing tissue, such as shoot and root tips, lateral root primordia, young leaves and flowers. Expressed in the inflorescence meristem, inflorescence stem and young flowers.
messages: Interacts with MED14, HDA19 and LUG. Interacts with KIN10 (PubMed:23229550).
messages: Involved in cell differentiation. Required for the specification of stamen and carpel identities and for the proper termination of stem cells in the floral meristem.
messages: Nucleus

3702:AT2G31270
gene id: 3702:AT2G31270
uniprot id: Q9SJW9
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Cdt1 family.
messages: Binds to ARC6.
messages: Expressed in proliferating (e.g. shoot and root apical meristems, organ primordia) and endoreplicating cells (e.g. guard cells and stomatal lineage, developing trichomes).
messages: Member of the pre-replication complex. Component of the plastid division machinery. Promotes polyloidization and regulates endoreduplication. Involved in the coordination of cell and plastid division.
messages: Phosphorylated by cyclin D- and cyclin A-containing CDKA-1, and thus targeted to proteasome-mediated proteolysis.
messages: Repressed by abscisic acid (ABA) and ABAP1. Degraded by the proteasome.
messages: chloroplast

3702:AT3G22040
gene id: 3702:AT3G22040
uniprot id: Q9LRK3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT5G64667
gene id: 3702:AT5G64667
uniprot id: A0A178U8Z6
uniprot id: Q6DUW9
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in leaves, buds, flowers, seedlings and seeds. Detected at the base of pedicel, in the floral and funicule abscission zones and in vascular tissues.
messages: IDL2 is only partially redundant with IDA.
messages: May be involved in floral abscission.
messages: extracellular space

3702:AT2G24120
gene id: 3702:AT2G24120
uniprot id: A0A5S9X0T4
uniprot id: F4INQ5
uniprot id: O24600
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phage and mitochondrial RNA polymerase family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Nuclear-encoded DNA-dependent RNA polymerase that catalyzes the transcription of DNA into RNA in chloroplasts using the four ribonucleoside triphosphates as substrates (Probable). Required for chloroplast development and leaf mesophyll cell proliferation (PubMed:16698900).
messages: Reduced plant growth, impaired lateral root formation, rounded and pale-green leaves, protruding leaf laminae, irregular leaf margins and reduced seed sets.
messages: chloroplast

3702:AT5G07450
gene id: 3702:AT5G07450
uniprot id: A0A654FZ39
uniprot id: Q9LY16
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family. Cyclin U/P subfamily.
messages: Expressed in roots, stems and flowers. Expressed in the shoot apex, leaf primordia and young leaves.
messages: Interacts with CDKA-1.

3702:AT3G55890
gene id: 3702:AT3G55890
uniprot id: A0A1I9LL83
uniprot id: A0A384KWG8
uniprot id: Q0WPD7
uniprot id: Q9LY56
names: Similarity
messages: Belongs to the yippee family.

3702:AT1G16440
gene id: 3702:AT1G16440
uniprot id: F4I4F2
names: Activity Regulation
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by PDPK1/PDK1.
messages: Autophosphorylated and phosphorylated by PDPK1/PDK1.
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Interacts with PDPK1/PDK1.
messages: Involved in root hair growth and morphogenesis.
messages: Plants over-expressing RHS3 show altered root hair morphology, such as spiral, bent or branched hairs.
messages: Specifically expressed in root hair cells.

3702:AT2G07722
gene id: 3702:AT2G07722
uniprot id: P94024
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07722) is not demonstrated.
messages: Mitochondrion membrane

3702:AT2G43160
gene id: 3702:AT2G43160
uniprot id: A0A5S9X736
uniprot id: Q67YI9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the epsin family.
messages: Golgi apparatus
messages: Interacts with clathrin, VTI12, DELTA-ADR and ALPHA-ADR.
messages: May have a role in transport via clathrin-coated vesicles from the trans-Golgi network to endosomes. Stimulates clathrin assembly (By similarity). Binds to membranes enriched in phosphatidylinositol 3-phosphate (PtdIns(3)P). Plays an important role in protein trafficking.
messages: The ENTH domain is required for PtdIns(3)P affinity and EPSIN2 subcellular location.
messages: Vesicle
messages: clathrin-coated vesicle

3702:AT4G33510
gene id: 3702:AT4G33510
uniprot id: A0A178US70
uniprot id: F4JIZ3
uniprot id: Q00218
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II DAHP synthase family.
messages: Binds 1 divalent cation per subunit. The enzyme is active with manganese, cobalt or cadmium ions.
messages: chloroplast

3702:AT1G70920
gene id: 3702:AT1G70920
uniprot id: A0A1P8AQQ9
uniprot id: A0A654EMW2
uniprot id: A9Z1E8
uniprot id: Q8GXM7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: Nucleus
messages: Probable transcription factor.

3702:AT5G54860
gene id: 3702:AT5G54860
uniprot id: Q8RWQ5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Folate-biopterin transporter (TC 2.A.71) family.
messages: Could mediate folate transport.
messages: Membrane

3702:AT5G58003
gene id: 3702:AT5G58003
uniprot id: A0A178UQH1
uniprot id: A0A1P8BFN2
uniprot id: A0A1P8BFR7
uniprot id: Q00IB6
names: Cofactor
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Binds Mg(2+), Co(2+) or Mn(2+).
messages: By NaCl.
messages: Interacts with RAP74.
messages: Nucleus
messages: Processively dephosphorylates 'Ser-2' and/or 'Ser-5' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1). This promotes the activity of RNA polymerase II (By similarity). Required for normal plant growth.
messages: The BRCT domain is required for interaction with RAP74.
messages: This promotes the activity of RNA polymerase II.

3702:AT1G07370
gene id: 3702:AT1G07370
uniprot id: A0A178W9N0
uniprot id: A0A6B7JDQ1
uniprot id: Q9M7Q7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PCNA family.
messages: Homo- and heterotrimer. Interacts with POLH, ATXR5 and ATXR6.
messages: Nucleus
messages: This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand.

3702:AT3G53460
gene id: 3702:AT3G53460
uniprot id: Q43349
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit increased sensitivity to cold stress.
messages: Stabilizes specific chloroplast mRNAs. Required for normal chloroplast development under cold stress conditions by stabilizing transcripts of numerous mRNAs under these conditions.
messages: chloroplast

3702:AT1G33220
gene id: 3702:AT1G33220
uniprot id: A0A178WMA1
uniprot id: Q9LP27
names: Caution
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G50650
gene id: 3702:AT1G50650
uniprot id: A0A178W893
uniprot id: Q9C6P6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the STIG1 family.
messages: Endosperm-specific cysteine-rich protein that acts downstream of BHLH95/ZOU to modify the interface between embryo and endosperm and mediate the separation of these two tissues during seed development. Necessary for the biogenesis of the embryo sheath, an extracuticular endosperm-derived structure at the surface of the embryo. Required for the separation of embryo and endosperm, and for normal progression of the embryo through the endosperm tissue. Required for the formation of a normal embryonic cuticle.
messages: Increased embryonic cuticule permeability. Altered cotyledon development. Cup-shaped cotyledons.
messages: Secreted
messages: Specifically expressed in seed endosperm at torpedo stage embryo development.

3702:AT3G14310
gene id: 3702:AT3G14310
uniprot id: A0A654F735
uniprot id: O49006
names: Activity Regulation
names: Biotechnology
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin (PubMed:21171891, PubMed:26183897). Required for zinc Zn(2+) homeostasis and to monitor Zn(2+) influence on cell wall-controlled growth processes such as root cell elongation (PubMed:23826687). Monitors seed germination and favors root hairs production (PubMed:28375469). Prevents cruciferin seed storage proteins activity, but promotes the expression of genes involved in cell wall organization and remodeling as well as genes involved in lipid and protein metabolism, during post-germinative growth of seedlings (PubMed:28375469). Confers sensitivity to Zn(2+) when overexpressed (PubMed:23826687). Acts as a susceptibility factor required for the initial colonization of the host tissue by virulent pathogens including Botrytis cinerea and Pectobacterium carotovorum, probably by facilitating cell wall pectine degradation by pathogen pectic enzymes after its demethylesterification (PubMed:21171891).
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Early germination and reduced root hair production associated with lower expression of several pectin-degrading enzymes, genes involved in cell wall organization and remodeling and genes involved in lipid and protein metabolism, thus leading to a global decrease in proteolytic activity, however, cruciferin genes accumulate abnormally (PubMed:28375469). Normal sensitivity to zinc Zn(2+) (PubMed:23826687). Increased resistance to Botrytis cinerea and Pectobacterium carotovorum associated with a reduced global pectin methylesterase (PME) activity, and correlating with an impaired ability of pathogens to grow on methylesterified pectin (PubMed:21171891).
messages: Expressed in roots, cotyledons, hypocotyls, seedlings, leaves, stems, flowers, dry seeds and siliques (PubMed:16622707, PubMed:9767082, PubMed:28375469). Accumulates in etiolated hypocotyls (at protein level) (PubMed:26183897).
messages: Expressed throughout silique development.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: Induced by necrotrophic pathogens such as Pectobacterium carotovorum and Botrytis cinerea.
messages: Interacts with BIIDXI and At5g11420 (PubMed:25442819). Binds reversibly to PMEI4, PMEI7 and PMEI8 to be inhibited; the stability of the PME3-PMEIs complexes and the inhibition of the pectin methylesterase (PME) activity is pH-dependent, based on protonation status of amino-acids at the complex interface (PubMed:26183897, PubMed:29109147, PubMed:28034952).
messages: Intron retention.
messages: Mutant pme3 facilitates efficiency of viable mesophyll protoplast isolation probably as a result of reduced methylesterified homogalacturonan (HGA) level.
messages: Regulated negatively by pectinesterase inhibitors (e.g. PMEI3, PMEI4, PMEI7 and PMEI9) in a pH-dependent manner, mainly in slightly acidic conditions (pH 6.0 and 5.0), especially in dark-grown hypocotyls; this processus relies on changes in the protonation of amino acids involved in intermolecular and intramolecular interactions.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: apoplast
messages: cell wall

3702:AT5G46350
gene id: 3702:AT5G46350
uniprot id: A0A5S9YBQ2
uniprot id: Q9FL26
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WRKY group II-c family.
messages: By wounding, abscisic acid (ABA), salicylic acid (SA), H(2)O(2), and infection with P.syringae pv. tomato DC3000 and B.cinerea (PubMed:20367464). Induced by salt stress (PubMed:23451802).
messages: Highly expressed in roots and at lower levels in rosette leaves, cauline leaves, stems, flowers and siliques.
messages: Interacts with VQ9 (via N-terminus).
messages: No visible phenotype under normal growth conditions (PubMed:20367464, PubMed:23451802). Mutant plants show increased resistance to the bacterial pathogen P.syringae and enhanced susceptibility to the fungal pathogen to B.cinerea (PubMed:20367464). Mutant plants display increased sensitivity to salt stress (PubMed:23451802).
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-TTGAC[CT]-3'), a frequently occurring stress-responsive cis-acting element. Functions as positive regulator of salt stress response. Binds the W box of LTI78/RD29A stress-response gene and directly regulates its transcription under salt stress. Functions antagonistically with VQ9 to regulate sodium and potassium homeostasis under salt stress by regulating the expression of downstream SOS (SALT OVERLY SENSITIVE) stress-responsive genes. The DNA-binding activity of WRKY8 is decreased by VQ9 (PubMed:23451802). Functions as negative regulator of basal resistance to the bacterial pathogen P.syringae and as positive regulator of resistance to the fungal pathogen to B.cinerea (PubMed:20367464). Functions as positive regulator of defense response againt tobamovirus (TMV) by regulating both the abscisic acid and ethylene signaling pathways. Positively regulates ABI4 expression and negatively modulates ACS6 and ERF104 expression by directly binding to the W box consensus motifs within their promoters (PubMed:23650359).

3702:AT5G53340
gene id: 3702:AT5G53340
uniprot id: Q94F27
uniprot id: W8PUB4
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 31 family.
messages: Expressed in roots, rosette leaves, cauline leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: May be due to a competing acceptor splice site.
messages: Membrane
messages: Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth.
messages: Reduced levels of arabinogalactan proteins.

3702:AT5G46150
gene id: 3702:AT5G46150
uniprot id: A0A178UKV9
uniprot id: A0A1P8B9V8
uniprot id: A0A1P8B9W3
uniprot id: Q67YS6
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CDC50/LEM3 family.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Membrane

3702:AT5G60140
gene id: 3702:AT5G60140
uniprot id: Q9FHB0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G44550
gene id: 3702:AT3G44550
uniprot id: A0A1I9LMU0
uniprot id: A0A654FEK0
uniprot id: Q0WRB0
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the fatty acyl-CoA reductase family.
messages: Catalyzes the reduction of fatty acyl-CoA to fatty alcohols (PubMed:20571114, PubMed:24005667). Catalyzes specifically the formation of C18:0 fatty alcohol (PubMed:20571114, PubMed:24005667). Provides the fatty alcohols required for synthesis of suberin in roots, seed coat and wound-induced leaf tissue (PubMed:20571114). Provides the fatty alcohols required for synthesis of alkyl hydroxycinnamates in root waxes (PubMed:22797656).
messages: Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
messages: Expressed in the endodermal cell layer surrounding the central vasculature in roots. Expressed in floral organs of very young unopened buds and receptacle of siliques.
messages: Induced by wounding and salt stress.

3702:AT1G70430
gene id: 3702:AT1G70430
uniprot id: A0A1P8AWS0
uniprot id: A0A1P8AWU5
uniprot id: A0A1P8AWU7
uniprot id: A0A654EPD2
uniprot id: F4I5F8
names: Similarity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.

3702:AT3G11940
gene id: 3702:AT3G11940
uniprot id: A0A178VED6
uniprot id: P51427
names: Disruption Phenotype
names: Similarity
names: Tissue Specificity
messages: Belongs to the universal ribosomal protein uS7 family.
messages: Embryonic lethality when homozygous, due to cell division arrest at early embryonic development stage.
messages: Expressed in root tips, lateral root primordia, leaf primordia, shoot apical meristem and vasculature of cotyledons.

3702:AT1G28450
gene id: 3702:AT1G28450
uniprot id: A0A7G2DWL7
uniprot id: Q9SGP3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G42790
gene id: 3702:AT3G42790
uniprot id: A0A178VCG6
uniprot id: Q9M2B4
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Alfin family.
messages: Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
messages: Interacts with H3K4me3 and to a lesser extent with H3K4me2.
messages: Lacks the Tyr (here Asp-204), a conserved feature of the aromatic cage required for the interaction with histone H3K4me3/2.
messages: Nucleus
messages: The PHD-type zinc finger mediates the binding to H3K4me3.
messages: Ubiquitously expressed.

3702:AT4G31510
gene id: 3702:AT4G31510
uniprot id: Q9SV19
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor (By similarity). Promotes slightly the tolerance to cadmium (Cd) and zinc (Zn) and to oxidizing chemicals (e.g. diamide and tert-butyl hydroperoxide (t-BOOH)) (PubMed:18980652).

3702:AT3G25165
gene id: 3702:AT3G25165
uniprot id: A0A178VM35
uniprot id: Q9LSG0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:ArthCp012
gene id: 3702:ArthCp012
uniprot id: P56764
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.
messages: Binds 1 Zn(2+) ion per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: chloroplast

3702:AT5G45330
gene id: 3702:AT5G45330
uniprot id: Q9FH77
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As a component of the decapping complex, involved in the degradation of mRNAs. Promotes P-body formation. Translational repressor (By similarity).
messages: Belongs to the LSM14 family.
messages: Homodimer. Component of the decapping complex (By similarity).
messages: P-body

3702:AT5G40260
gene id: 3702:AT5G40260
uniprot id: A0A178UC63
uniprot id: Q8LFH5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SWEET sugar transporter family.
messages: Cell membrane
messages: Dramatically reduced fertility due to a postmeiotic rupture of microspores.
messages: Expressed during anther development in tapetal cells and microsporocytes during meiosis. When the tapetum degenerates, detected only in pollen grains.
messages: Expressed in inflorescences, embryo sacs and pollen, and at a lower level in stems. Barely detected in roots, leaves and seedlings.
messages: Forms homooligomers and heterooligomers with SWEET4, SWEET5, SWEET6, SWEET7, SWEET9, SWEET10, SWEET11, SWEET13, SWEET15, SWEET16 and SWEET17.
messages: Induced by the pathogenic bacteria P.syringae pv. tomato.
messages: Mediates both low-affinity uptake and efflux of sugar across the membrane.
messages: Mediates both low-affinity uptake and efflux of sugar across the plasma membrane. Required, in pollen, for microspore cell integrity and primexine pattern formation (PubMed:18434608, PubMed:25988582).
messages: Membrane
messages: Not detected in inflorescence (PubMed:18434608).

3702:AT1G22130
gene id: 3702:AT1G22130
uniprot id: A0A654EBX2
uniprot id: Q9LM46
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in pollen.
messages: Forms heterodimers with AGL30 and AGL65.
messages: No visible phenotype under normal growth conditions. Pollen grains from the double mutant agl66 and agl104 have severely reduced viability, delayed germination and aberrant pollen tube growth.
messages: Nucleus
messages: Probable transcription factor that forms heterodimers with the MADS-box proteins AGL30 and AGL65 and is involved in the regulation of pollen maturation at the late stages of pollen development and pollen tube growth.

3702:AT4G31310
gene id: 3702:AT4G31310
uniprot id: A0A178UWU9
uniprot id: A0A384LCK1
uniprot id: A2RVS4
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the gamma-glutamylcyclotransferase family.
messages: Down-regulated by biological stimuli.
messages: Expressed constitutively during the life cycle.
messages: Expressed in flowers, leaves, stems and roots.
messages: Putative gamma-glutamylcyclotransferase.

3702:AT5G48930
gene id: 3702:AT5G48930
uniprot id: Q9FI78
names: Function
names: Similarity
messages: Acyltransferase involved in the biosynthesis of lignin (PubMed:15161961, PubMed:26858288, PubMed:27805809). Accepts caffeoyl-CoA and p-coumaroyl-CoA as substrates and transfers the acyl group on both shikimate and quinate acceptors (PubMed:15161961).
messages: Belongs to the plant acyltransferase family.

3702:AT4G20980
gene id: 3702:AT4G20980
uniprot id: A0A178V3J1
uniprot id: P56820
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit D family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is composed of at least 13 different subunits.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm
messages: The RNA gate region regulates mRNA cap recognition to prevent promiscuous mRNA-binding before assembly of eif3d into the full eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs.

3702:AT1G68910
gene id: 3702:AT1G68910
uniprot id: A8MQR0
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of Ran complexes at least composed of WIT1 or WIT2, RANGAP1 or RANGAP2, and WIP1 or WIP2 or WIP3 (By similarity). Interacts with KAKU1 (PubMed:23973298, PubMed:25759303). Core component of the LINC complex which is composed of inner nuclear membrane SUN domain-containing proteins coupled to outer nuclear membrane WIP and WIT proteins. The LINC complex also involves nucleoskeletal proteins CRWN/LINC and possibly KAKU4 and the cytoskeletal myosin KAKU1 (PubMed:25759303). Interacts with WIP1, WIP2 and WIP3 (PubMed:25759303).
messages: Membrane
messages: Together with WIT1, required for the nuclear envelope docking of RANGAP proteins in root tips (PubMed:18591351). Plays a role in nuclear shape determination (PubMed:25759303). As component of the SUN-WIP-WIT2-KAKU1 complex, mediates the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes (PubMed:25759303).
messages: Ubiquitous.

3702:AT2G26230
gene id: 3702:AT2G26230
uniprot id: O04420
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the uricase family.
messages: Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
messages: Peroxisome

3702:AT1G20630
gene id: 3702:AT1G20630
uniprot id: A0A384KXY6
uniprot id: Q0WUH6
uniprot id: Q96528
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the catalase family.
messages: By hydrogen peroxide. By abscisic acid (ABA), drought, and salt stress through the MKK1-MPK6 mediation.
messages: Cytoplasm
messages: Homotetramer and heterotetramer. At least six or seven isozymes are produced from a mixture of 3 gene products. Interacts with NCA1 (PubMed:25700484). Interacts with LSD1 (PubMed:23958864).
messages: Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.

3702:AT1G04770
gene id: 3702:AT1G04770
uniprot id: A0A178WHH9
uniprot id: Q8L730
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MS5 protein family.
messages: Induced in response to sulfur deprivation.
messages: Involved in the utilization of stored sulfate under sulfur-deficient conditions.
messages: Nucleus

3702:AT4G00210
gene id: 3702:AT4G00210
uniprot id: A0A178UT63
uniprot id: O81322
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in roots, stems and flowers.

3702:AT4G28350
gene id: 3702:AT4G28350
uniprot id: A0A178V3A6
uniprot id: O49445
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.

3702:AT1G14910
gene id: 3702:AT1G14910
uniprot id: A0A178W3S8
uniprot id: A0A178W5R2
uniprot id: A0A384L4B8
uniprot id: P94017
names: Caution
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in the whole plant.
messages: Golgi apparatus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vesicle
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT1G12230
gene id: 3702:AT1G12230
uniprot id: A0A5S9U222
uniprot id: F4IC59
uniprot id: Q9FWX0
names: Similarity
messages: Belongs to the transaldolase family. Type 1 subfamily.

3702:AT4G27460
gene id: 3702:AT4G27460
uniprot id: A0A178V3C0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G05140
gene id: 3702:AT5G05140
uniprot id: A0A5S9Y292
uniprot id: Q9FHK9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 26 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). May play a role in transcription elongation (By similarity).
messages: Component of the Mediator complex.
messages: Nucleus

3702:AT5G12470
gene id: 3702:AT5G12470
uniprot id: A0A178US34
uniprot id: Q94CJ5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RETICULATA family.
messages: May play a role in leaf development.
messages: Pale interveinal phenotype due to marked reduction in the density of mesophyll cells in interveinal regions of leaves.
messages: chloroplast membrane

3702:AT1G22490
gene id: 3702:AT1G22490
uniprot id: A0A1P8ANU6
uniprot id: A0A7G2DUV0
uniprot id: Q9SK91
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT2G43460
gene id: 3702:AT2G43460
uniprot id: A0A178VC46
uniprot id: O22860
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL38 family.

3702:AT2G39390
gene id: 3702:AT2G39390
uniprot id: A0A178VS44
uniprot id: O80626
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

3702:AT3G01520
gene id: 3702:AT3G01520
uniprot id: Q8LGG8
names: Similarity
names: Subunit
messages: Belongs to the universal stress protein A family.
messages: Homohexamer.

3702:AT1G11750
gene id: 3702:AT1G11750
uniprot id: A0A178WEL1
uniprot id: F4IAG5
uniprot id: Q9SAA2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Essential protein required for chloroplast development and integrity.
messages: Component of the chloroplastic Clp protease core complex which consist of at least 16 proteins: CLPP4 (3 copies), CLPP5 (3 copies), CLPR4 (2 copies), ClpP1 (1 copy), CLPP6 (1 copy), CLPR2 (1 copy), CLPT1 (1 copy), CLPT2 (1 copy) and 3 copies of CLPP3 and/or CLPR1 and/or CLPR3 (PubMed:11278690, PubMed:14593120, PubMed:16766689, PubMed:16980539, PubMed:9951729). The core complex is organized in two heptameric rings, one containing CLPP3,4,5,6 in a 1:2:3:1 ratio and the other CLPP1 and CLPR1,2,3,4 in a 3:1:1:1:1 ratio (PubMed:21712416).
messages: Mostly expressed in leaves. Also detected in stems, and to a lower extent, in roots (at protein level).
messages: Repressed in darkness. Induced during cold acclimation (at protein level).
messages: chloroplast stroma

3702:AT2G16880
gene id: 3702:AT2G16880
uniprot id: Q9ZVX5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G16850
gene id: 3702:AT2G16850
uniprot id: A0A178VPY1
uniprot id: Q9ZVX8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.
messages: Cell membrane
messages: Expressed in roots and floral buds.
messages: Membrane

3702:AT4G12120
gene id: 3702:AT4G12120
uniprot id: Q9SZ77
names: Function
names: Similarity
messages: Belongs to the STXBP/unc-18/SEC1 family.
messages: Involved in the vesicle trafficking. Binds syntaxins (By similarity).

3702:AT5G25190
gene id: 3702:AT5G25190
uniprot id: A0A178UBV4
uniprot id: Q94AW5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G06360
gene id: 3702:AT1G06360
uniprot id: A0A1P8AN77
uniprot id: Q9LMI3
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The histidine box domains are involved in binding the catalytic metal ions.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.

3702:AT1G61740
gene id: 3702:AT1G61740
uniprot id: A0A178W6K9
uniprot id: Q9SYB0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G06100
gene id: 3702:AT5G06100
uniprot id: A0A1S5M0M7
uniprot id: Q8W1W6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates at the shoot apex upon the transition from short- to long-day photoperiods leading to flowering and after gibberellins (GAs) treatment (PubMed:11743113). Repressed by microRNA159 (miR159a and miR159b) in vegetative tissues (PubMed:15226253, PubMed:20699403, PubMed:17916625). Specific expression in floral organs and in the shoot apices is regulated via miR159-mediated degradation (PubMed:15722475). Repressed in germinating seeds by miR159-mediated cleavage in an abscisic acid (ABA) and ABI3-dependent manner, probably to desensitize hormone signaling during seedling stress responses (PubMed:17217461, PubMed:18305205). Slightly induced by ethylene and cytokinins (PubMed:9839469).
messages: Hyposensitivity to abscisic acid (ABA) (PubMed:17217461). Reduced expression levels of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. The triple mutant myb33 myb65 myb101 has a male sterility and exhibits slower protein storage vacuoles (PSVs) vacuolation rate in aleurone layers upon seed germination (PubMed:20699403). The myb33 myb65 double mutant is defective in anther development, with a tapetum undergoing hypertrophy at the pollen mother cell stage, resulting in premeiotic abortion of pollen development and male sterility. This sterility is conditional, fertility being increased both under higher light or lower temperature conditions (PubMed:15722475).
messages: In germinating seeds, present in the root tip and in a linear array of up to 20 to 30 cells above the root tip. Weak expression in the vegetative shoot apex. High levels in primordial leaves. Strongly expressed in the inflorescence apex, and, to some extent, in the inflorescence stem, the vascular tissue, and the vascular tissue in leaf primordia. In the gynoecium, confined to ovules. In developing anthers detected in developing locules of immature anthers and later, at low levels, in pollen grains (PubMed:11743113). In flowers, expressed in sepals, style, receptacle, anther filaments, especially in young anthers, and connective but not in anthers themselves (PubMed:15722475).
messages: Mostly expressed in stems, shoot apices, flowers and floral shoot tips, and, to a lower extent, in roots (e.g. root tips), seedlings, leaves and siliques.
messages: Nucleus
messages: Transcriptional activator of alpha-amylase expression that binds to 5'-CAACTGTC-3' motif in target gene promoter (PubMed:11743113). Positive regulator of abscisic acid (ABA) responses leading to growth arrest during seed germination (PubMed:17217461). In vegetative tissues, inhibits growth by reducing cell proliferation. Promotes the expression of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. Together with MYB65 and MYB101, promotes the programmed cell death (PCD) the vacuolation of protein storage vacuoles (PSVs) in the aleurone layers during seed germination (PubMed:20699403). Binds to a GARE site (GA-response element) in the LEAFY promoter, essential for its gibberellic acid (GA)-mediated induction (PubMed:15226253). Together with MYB65, facilitates anther and tapetum development (PubMed:15722475).
messages: Transcriptional activator of alpha-amylase expression.

3702:AT1G50970
gene id: 3702:AT1G50970
uniprot id: A0A1P8AWN0
uniprot id: A0A1P8AWQ9
uniprot id: F4I7Y2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VPS53 family.
messages: Component of the Golgi-associated retrograde protein (GARP) complex.
messages: Cytoplasm
messages: Endosome membrane
messages: Involved in retrograde transport from early and late endosomes to late Golgi, leading to the membrane fusion between late Golgi and endosomal vesicles.
messages: Membrane
messages: trans-Golgi network membrane

3702:AT5G44070
gene id: 3702:AT5G44070
uniprot id: Q9S7Z3
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the phytochelatin synthase family.
messages: Expressed constitutively.
messages: Expressed in roots and shoots.
messages: Homoglutathione (hGSH) is a good acceptor, but a poor donor, of gamma-glutamylcysteine units.
messages: Induced by copper, and by cadmium during the early stages of plant development. Gradual decrease of cadmium induction as plants continue to grow, and by 15 day after germination, total loss of induction.
messages: Involved in the synthesis of phytochelatins (PC) and homophytochelatins (hPC), the heavy-metal-binding peptides of plants. Also involved in glutathione-conjugates degradation.
messages: Plants are highly sensitive to Cd (20- to 40-fold) and AsO(4)(3-) ions, sensitive (eightfold) to Ag ions, slightly sensitive (twofold) to Cu and Hg ions, and insensitive to Zn, SeO(3)(2-) and Ni ions.
messages: Requires cadmium for activity. Also activated in vitro or in heterologous system by Ag(+), Hg(+), Zn(2+), Cu(2+), Fe(2+) or Fe(3+) ions, but not by Co(2+) or Ni(2+) ions.
messages: The C-terminal part (373-485) is required to determine enzyme responsiveness to a broad range of heavy metals.
messages: The intermediate part (284-372) is important for enzyme stabilization.

3702:AT2G19800
gene id: 3702:AT2G19800
uniprot id: A0A384L114
uniprot id: B4F7Q2
uniprot id: O82200
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the myo-inositol oxygenase family.
messages: Binds 2 iron ions per subunit.
messages: Cytoplasm
messages: Expressed mainly in roots, stems, flowers and siliques. Low expression in leaves.
messages: Incorporation of the inositol pathway-derived monosaccharides is strongly reduced in knockout AtMIOX2 seedling walls.
messages: Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.

3702:AT5G08250
gene id: 3702:AT5G08250
uniprot id: A0A654FZE3
uniprot id: Q8L7B4
uniprot id: Q9LEY2
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G32470
gene id: 3702:AT4G32470
uniprot id: A0A178UU15
uniprot id: F4JUC2
uniprot id: Q9SUU5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UQCRB/QCR7 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341, PubMed:18305213). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Mitochondrion inner membrane

3702:AT5G61310
gene id: 3702:AT5G61310
uniprot id: A0A178UCG7
uniprot id: A0A384KTY6
uniprot id: Q9FLK2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 5C family.
messages: Membrane
messages: Mitochondrion inner membrane
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.

3702:AT1G18250
gene id: 3702:AT1G18250
uniprot id: P50699
names: Similarity
messages: Belongs to the thaumatin family.

3702:AT2G35380
gene id: 3702:AT2G35380
uniprot id: A0A178VU84
uniprot id: F4IJW0
uniprot id: Q9SLH7
names: Caution
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Late induced by benzothiadiazol, a chemical analog of salicylic acid. Enhanced expression following incompatible bacterial pathogen attack.
messages: May be implicated in the systemic acquired resistance response via the salicylic acid signal transduction pathway.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT1G07175
gene id: 3702:AT1G07175
uniprot id: A0A384KK61
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G46410
gene id: 3702:AT3G46410
uniprot id: Q7FK55
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G66160
gene id: 3702:AT5G66160
uniprot id: F4JZ38
uniprot id: Q9M622
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Involved in the trafficking of vacuolar proteins. Functions probably as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) by binding the C-terminal vacuolar sorting determinant (VSD) of vacuolar-sorted proteins.
messages: Membrane
messages: Prevacuolar compartment membrane
messages: Protein storage vacuole membrane

3702:AT1G64670
gene id: 3702:AT1G64670
uniprot id: A0A178WKZ6
uniprot id: Q8LFX7
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Controls cuticle development and morphogenesis, by promoting cutin and suberin monomers loading (PubMed:16415209, PubMed:17257167, PubMed:18952782, PubMed:26990896). Involved in the regulation of abscissic acid (ABA) biosynthesis in response to osmotic stress. Plays an important role in osmotic stress and drought resistance (PubMed:21610183). Required to ensure a reduced permeability of aerial tissue, thus preventing transpiration (PubMed:18952782, PubMed:21610183, PubMed:26990896). Regulates lateral root hair development (PubMed:18952782).
messages: Defects characteristic of the loss of cuticle structure associated with an enhanced accumulation of cell wall-bound lipids and epicuticular waxes (PubMed:16415209, PubMed:17257167, PubMed:18952782, PubMed:26990896). Reduced expression of abscissic acid (ABA) biosynthesis genes (e.g. NCED3) in response to osmotic stress (e.g. polyethylene glycol) leading to reduced levels of ABA and high sensitivity to osmotic stress and drought, especially during seed germination and early seedling development (PubMed:21610183). Increased aerial tissue permeability to the toluidine blue (TB) dye (PubMed:18952782). Enhanced transpiration. Strong decrease in total cutin monomer load in young leaves and flowers. Reduced levels of suberin in roots (PubMed:26990896). Pleiotropic effect on growth, viability, and cell differentiation, leading to abnormalities such as long root hairs, excessively branched roots, shrinking of epidermal cells, and flattened/misshapen trichomes (PubMed:16415209). Strong increase of total lateral root lengths (TOT) on mild osmotic stress conditions (PubMed:18952782). Total immunity to the pathogenic necrotrophic fungus Botrytis cinerea accompanied by the release of a fungitoxic activity and increased expression of defense genes (PubMed:17257167).
messages: Expressed exclusively in protodermal and epidermal cells of all organs, especially on adaxial sides.
messages: In germinating seed, present in the embryo epidermis, in cotyledons and in leaf primordia of the first true leaves. In cotyledons, mostly expressed in guard cells and vasculature. Observed in developing leaf buds, including the nodes and buds of cauline leaves (PubMed:26990896). In flowers, expressed in all organs, levels decreasing during flower aging. In the pistil, accumulates mostly in the abaxial epidermal cells, and, to a lower extent, in the septum and the inner ovary wall (PubMed:16415209, PubMed:26990896). Also expressed in the stigmatic papillae and vasculature of the sepals, petals and stamens. Accumulates in embryo during seed dehydration. Present in the central cylinder of the roots. In addition, detected in suberized tissues, such as siliques abscission zone and seed chalaza/micropyle region (PubMed:26990896).
messages: Induced by osmotic stress and abscissic acid (ABA).
messages: Required for infection by the pathogenic necrotrophic fungus Botrytis cinerea, probably by regulating structural traits of the cuticle.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G04940
gene id: 3702:AT5G04940
uniprot id: C0SVN4
uniprot id: Q9FF80
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although the SET domain contains the active site of enzymatic activity, both pre-SET and post-SET domains are required for methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Expressed in leaves stems and flowers.
messages: Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression.
messages: In the pre-SET domain, Cys residues bind 3 zinc ions that are arranged in a triangular cluster; some of these Cys residues contribute to the binding of two zinc ions within the cluster.
messages: Nucleus
messages: centromere

3702:AT5G17890
gene id: 3702:AT5G17890
uniprot id: Q9FKN7
names: Disruption Phenotype
names: Function
names: Miscellaneous
messages: NB-LRR receptor-like protein that modulates growth, cell death and freezing tolerance in a temperature-dependent manner. May be involved in defense responses.
messages: No visible phenotype under normal growth conditions.
messages: The gain-of-function mutants chs3-1 show no visible phenotype when grown at the permissive temperature of 22 degrees Celsius. Mutant plants (chs3-1) germinated and grown at 16 degrees Celsius show developmental defects, including dwarfism, with small and curly leaves, early senescence of cotyledons, constitutively activated defense responses and enhanced tolerance to freezing temperatures.

3702:AT5G65310
gene id: 3702:AT5G65310
uniprot id: F4KHX1
uniprot id: P46667
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Down-regulated by abscisic acid (ABA) and by salt stress.
messages: Interacts with DNA as homodimer.
messages: Localized primarily to the hypocotyl of germinating seedlings.
messages: Nucleus
messages: Probable transcription factor that acts as a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. Binds to the DNA sequence 5'-CAATNATTG-3'.
messages: Transcription factor.
messages: Widely expressed.

3702:AT3G08740
gene id: 3702:AT3G08740
uniprot id: A0A654F590
uniprot id: Q8VZW6
names: Similarity
messages: Belongs to the elongation factor P family.

3702:AT1G53430
gene id: 3702:AT1G53430
uniprot id: C0LGG8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT5G60130
gene id: 3702:AT5G60130
uniprot id: Q9LVG1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G47790
gene id: 3702:AT5G47790
uniprot id: Q9FIK2
names: Function
names: Subunit
messages: Inhibitor of protein-phosphatase 1 (PP1). Binds to and inhibits PP1 activity.
messages: Interacts with human protein phosphatase PPP1C.

3702:AT3G19960
gene id: 3702:AT3G19960
uniprot id: A0A178VKI1
uniprot id: A0A1I9LLW5
uniprot id: F4JCF9
uniprot id: Q9LHE9
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class VIII subfamily.
messages: Endoplasmic reticulum
messages: Endosome
messages: Homodimer.
messages: IQ domain mediates interaction with calmodulin.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity). Involved in endocytosis via its action in endosomal trafficking.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: phragmoplast
messages: plasmodesma

3702:AT2G34680
gene id: 3702:AT2G34680
uniprot id: F4IIU4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed during auxin-induced lateral root formation.
messages: Induced between 4 and 8 hours after treatment with auxin and remains high for at least 24 hours.
messages: Interacts with KCBP.
messages: Microtubule-associated protein that may be involved in the maturation of cell plates and proper insertion of cross-walls after cytokinesis.
messages: No visible phenotype.
messages: Strongly expressed in dividing cells, like the meristemic region of the root tip.
messages: cell cortex
messages: phragmoplast

3702:AT1G76650
gene id: 3702:AT1G76650
uniprot id: Q9SRE6
names: Caution
names: Function
names: Induction
names: Subunit
names: Tissue Specificity
messages: Although assigned as a calmodulin family member by Ref.5, it only contains EF-hand domains.
messages: Binds to ABCG36.
messages: By touch, salt and hydrogen peroxide treatments, drought stress, wounding, dark and infection by the bacterial pathogen P.syringae.
messages: Expressed in cotyledons and guard cells of young leaves. In mature root, expressed in the epidermis, trichoblasts, young lateral root and root tip. Expressed from stage 9 to 15 of flower development in anther wall.
messages: Potential calcium sensor that binds calcium in vitro.

3702:AT3G25490
gene id: 3702:AT3G25490
uniprot id: Q9LSV3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

3702:AT2G41600
gene id: 3702:AT2G41600
uniprot id: A0A178VV36
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G47110
gene id: 3702:AT2G47110
uniprot id: A0A178VYW3
uniprot id: P59232
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Component of the 40S subunit of the ribosome.
messages: Cytoplasm
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family.
messages: In the N-terminal section; belongs to the ubiquitin family.
messages: Nucleus
messages: Part of the 40S ribosomal subunit.
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there are one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either eL40 or eS31) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT3G02350
gene id: 3702:AT3G02350
uniprot id: A0A178VEE3
uniprot id: Q9FWA4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 8 family.
messages: Expressed in roots, inflorescences, siliques, leaves and stems.
messages: Golgi apparatus membrane
messages: May be involved in pectin synthesis.

3702:AT3G48900
gene id: 3702:AT3G48900
uniprot id: Q9M2Z3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the XPG/RAD2 endonuclease family. GEN subfamily.
messages: Binds 2 magnesium ions per subunit. They probably participate in the reaction catalyzed by the enzyme. May bind an additional third magnesium ion after substrate binding.
messages: Endonuclease which cleaves flap structures at the junction between single-stranded DNA and double-stranded DNA with a specific cleavage site in the 5' overhang strand exactly one nucleotide 3' of the branch point (PubMed:25037209). Structure- and sequence-specific nuclease that resolves holliday junctions (HJs) by symmetrically oriented incisions in two opposing strands near the junction point, thus leading to ligatable products; HJs are physical links between homologous DNA molecules that arise as central intermediary structures during homologous recombination and repair in meiotic and somatic cells (PubMed:25037209). Structure-specific nuclease with 5'-flap endonuclease activity, preferentially cleaving static flaps 5' overhang strand exactly one nucleotide in the 3' direction of the branch point and, to lower extent, on the two neighboring positions (PubMed:25037209). Also able to cleave double-stranded flap strand 1 one nucleotide in the 3' direction of the branch point (PubMed:25037209). Together with MUS81, essential for the resolution of toxic replication structures to ensure genome stability, and to maintain telomere integrity and replication (PubMed:26704385).
messages: May be due to an intron retention.
messages: Normal sensitivity to DNA damaging agents (PubMed:26704385). Mild UV sensitivity in the gen1 send1 double mutant (PubMed:26704385). The double mutant mus81 send1 exhibits severe developmental defects (e.g. strong growth retardation and impaired leaf and shoot development), increased endoreduplication, slower cell cycle progression, spontaneous cell death and genome instability associated with a dramatic loss of telomeric repeats (PubMed:26704385).
messages: Nucleus

3702:AT4G37150
gene id: 3702:AT4G37150
uniprot id: A0A178V387
uniprot id: O23171
names: Activity Regulation
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: By pathogen infection.
messages: Esterase activity is down-regulated by salicylic acid (SA).
messages: Expression of MES9 can restore systemic acquired resistance in SAR-deficient tobacco plants.
messages: Methylesterase shown to have carboxylesterase activity, methyl indole-3-acetic acid (MeIAA) esterase activity, methyl salicylate (MeSA) esterase activity and methyl jasmonate (MeJA) esterase activity in vitro. Required to convert methyl salicylate (MeSA) to salicylic acid (SA) as part of the signal transduction pathways that activate systemic acquired resistance in systemic tissue. MeSA is believed to be an inactive form that needs to be demethylated to exert a biological effect.
messages: Methylesterase.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G73580
gene id: 3702:AT1G73580
uniprot id: A0A178WEL5
uniprot id: Q9C6B7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus.
messages: Cell membrane
messages: Membrane
messages: Nucleus
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity).

3702:AT2G48000
gene id: 3702:AT2G48000
uniprot id: Q9ZU88
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT4G13460
gene id: 3702:AT4G13460
uniprot id: B9DGV6
uniprot id: Q9T0G7
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Although both SET and pre-SET domains are present, the absence of the post-SET domain may explain the lack of methyltransferase activity. Besides, the Cys residues in the SET domain that normally bind a zinc ion are not conserved.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Component of an RNA-directed DNA methylation (RdDM) complex that contains at least MORC6, MORC1/CRT1, MORC2, SWI3D and SUVH9. Interacts directly with MORC6, MORC2 and MORC1/CRT1. Interacts with SWI3B, SWI3C and SWI3D (PubMed:27171427).
messages: Histone methyltransferase family member that plays a role in gene silencing (PubMed:19043555, PubMed:24463519, PubMed:27171427). Together with MORC6 and SUVH2, regulates the silencing of some transposable elements (TEs) (PubMed:27171427). According to PubMed:19043555, the protein does not bind S-adenosyl-L-methionine and lacks methyltransferase activity. Instead, it may function downstream of DRM2 in RNA-directed DNA methylation, binding to methylated DNA and recruiting DNA-directed RNA polymerase V to chromatin (PubMed:24463519, PubMed:27171427).
messages: Impaired gene silencing due to decondensation of chromocenters leading to the derepression of DNA-methylated genes and transposable elements (TEs).
messages: In the pre-SET domain, Cys residues bind 3 zinc ions that are arranged in a triangular cluster; some of these Cys residues contribute to the binding of two zinc ions within the cluster.
messages: Nucleus
messages: centromere

3702:AT5G56460
gene id: 3702:AT5G56460
uniprot id: A0A178UJW6
uniprot id: Q9FM85
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: May be involved in plant defense signaling.
messages: Palmitoylation at Cys-4 and Cys-6 are required for plasma membrane location.

3702:AT5G12170
gene id: 3702:AT5G12170
uniprot id: A0A178UGU6
uniprot id: A0A1P8BE74
uniprot id: Q8RWL5
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CRT-like transporter family.
messages: Involved in thiol transport from the plastid to the cytosol. Transports probably both glutathione (GSH) and its precursor, gamma-glutamylcysteine (gamma-EC). Exhibits some functional redundancy with CLT1 in maintaining the root GSH pool.
messages: Membrane
messages: No visible phenotype. Clt1, clt3 and clt3 triple mutants are more sensitive to Cd(2+), have a decreased level of cytosolic GSH, an altered systemic acquired resistance response and are more sensitive to Phytophthora infection (PubMed:20080670). Clt1, clt3 and clt3 triple mutants have decreased lateral root densities (PubMed:24204368).
messages: Probable intron retention.
messages: chloroplast membrane

3702:AT4G21810
gene id: 3702:AT4G21810
uniprot id: A0A654FRQ5
uniprot id: Q8VZ96
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the derlin family.
messages: Endoplasmic reticulum membrane
messages: May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins.
messages: May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins.
messages: Membrane

3702:AT3G17800
gene id: 3702:AT3G17800
uniprot id: Q9LVJ0
names: Induction
names: Subcellular Location Annotation
messages: Induced transiently by UV-B, ozone and wounding.
messages: chloroplast

3702:AT5G43300
gene id: 3702:AT5G43300
uniprot id: Q680A6
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: By phosphate starvation.
messages: Expressed in flowers and siliques.

3702:AT4G00730
gene id: 3702:AT4G00730
uniprot id: B3H591
uniprot id: Q0WV12
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Expressed in roots, stems, leaves and floral buds.
messages: Interacts with AIL7/PLT7, ANT, BBM and AIL1.
messages: Nucleus
messages: Plants display a strong reduction of anthocyanin content on the adaxial side of rosette leaves, a slight reduction onf the abaxial side, and extra cells between cortical and epidermal layers in roots.
messages: Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root.

3702:AT1G22270
gene id: 3702:AT1G22270
uniprot id: A0A178WGJ7
uniprot id: Q8LFJ5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Acts as an activator of both rRNA/tRNA and protein methyltransferases (By similarity). Required for TRM9 tRNA methyltransferase activity (PubMed:21653555). Involved in the regulation of cell division progression during organ growth. Required for the expression of cell cycle-related genes, and the G2-M phase progression during organogenesis (PubMed:19929876).
messages: Belongs to the TRM112 family.
messages: Interacts with TRM9.
messages: Semi-dwarf phenotype. Reduced organ growth due to inhibition of cell proliferation.

3702:AT5G67330
gene id: 3702:AT5G67330
uniprot id: A0A5S9YI31
uniprot id: Q9FN18
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NRAMP (TC 2.A.55) family.
messages: By iron starvation.
messages: Expressed in vascular tissues.
messages: No visible phenotype under normal growth condition, but slightly enhanced resistance of root growth in presence of Cd and increased accumulation of Mn and Zn under Fe starvation.
messages: Vacuolar metal transporter involved in intracellular metal homeostasis. Can transport iron (Fe), manganese (Mn) and cadmium (Cd). Regulates metal accumulation under Fe starvation. Acts redundantly with NRAMP3 to mobilize vacuolar Fe and provide sufficient Fe during seed germination. In association with NRAMP3, required for optimal growth and photosynthesis under Mn deficiency. Exports Mn from vacuoles in leaf mesophyll cells, making Mn available for functional photosystem II in chloroplasts.
messages: Vacuole membrane

3702:AT1G29900
gene id: 3702:AT1G29900
uniprot id: A0A5S9WFA7
uniprot id: Q42601
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CarB family.
messages: Binds 4 Mg(2+) or Mn(2+) ions per subunit.
messages: By phosphate starvation in shoot.
messages: Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.
messages: Expressed in roots and leaves.
messages: Subunit of the carbamoyl-phosphate synthetase (CPS) composed of a small chain CARA/VEN6 and a large chain CARB/VEN3. Involved in arginine biosynthesis. Required for mesophyll development.
messages: The ven3-1, ven3-2, ven3-3 and ven3-4 phenotypes are rescued by exogenous application of citrulline, an arginine precursor.
messages: chloroplast

3702:AT2G41750
gene id: 3702:AT2G41750
uniprot id: A0A178VLC9
uniprot id: F4IL05
names: Domain
names: Function
names: Similarity
messages: Belongs to the TDD superfamily. DTWD2 family.
messages: Catalyzes the formation of 3-(3-amino-3-carboxypropyl)uridine (acp3U) at position 20a in the D-loop of several cytoplasmic tRNAs (acp3U(20a)).
messages: Contains 1 DXTW motif.

3702:AT5G66815
gene id: 3702:AT5G66815
uniprot id: Q058G9
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the C-terminally encoded plant signaling peptide (CEP) family.
messages: Extracellular signaling peptide that represses plant growth rate. Regulates shoot gravitropic responses (PubMed:24179095). Represses primary root length and lateral root initiation, probably by repressing the CEP receptor CEPR1 (PubMed:24179096, PubMed:27296247). Regulates systemic nitrogen (N)-demand signaling. Mediates up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386).
messages: Hydroxylated peptide is more active than non-hydroxylated peptide.
messages: Increased plant height with abnormal shoot gravitropic responses (PubMed:24179095). Longer primary root length and increased number of lateral roots initiation and primordia (PubMed:27296247).
messages: Induced by gibberellic acid (GA) and phosphorus (P), but repressed by brassinosteroids (BR), salicylic acid (SA) and nitrogen (N) (PubMed:24179095). Repressed by auxin (e.g. IAA and NAA) (PubMed:24179095, PubMed:27296247). Accumulates in roots in response to nitrate, nitrogen and ammonium chloride NH(4)Cl depletion (PubMed:24179096, PubMed:25324386). Induced in shoots by osmotic stress (e.g. mannitol) (PubMed:24179096).
messages: Interacts with the CEP receptor CEPR1.
messages: Mostly expressed in roots, and, at lower levels, in stems, leaves and flowers (PubMed:18315543, PubMed:24179095). Present in lateral root primordia (especially in vasculature and in the basal meristem) (PubMed:24179095, PubMed:27296247). Predominantly expressed in the phloem pole-associated pericycle (PPP) cells, and, to a lower extent, in the adjacent phloem (PubMed:27296247). Observed in lateral roots (especially in vasculature), root-hypocotyl junction, leaves, inflorescence stems and flowers (PubMed:24179095).
messages: The mature small signaling peptide is generated by proteolytic processing of the longer precursor.
messages: apoplast

3702:AT2G01320
gene id: 3702:AT2G01320
uniprot id: A0A178VRW2
uniprot id: A0A178VSW5
uniprot id: A0A178VTF8
uniprot id: A0A1P8B1W8
uniprot id: A0A1P8B1X3
uniprot id: A0NAA8
uniprot id: Q9ZU35
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G08150
gene id: 3702:AT1G08150
uniprot id: Q3EDG3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane
messages: Preferentially expressed in pollen.

3702:AT1G30280
gene id: 3702:AT1G30280
uniprot id: A0A178W9A2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G46860
gene id: 3702:AT5G46860
uniprot id: A0A178UDT6
uniprot id: P93654
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the syntaxin family.
messages: Expressed in roots, leaves, stems, flower and green siliques.
messages: Interacts with VTI11 and SYP51 to form a t-SNARE complex, but not with VPS45.
messages: May provide the t-SNARE function in the vacuolar assembly. Promotes the formation of vacuolar membrane 'bulbs'. Required for inflorescence stem gravitropism.
messages: Prevacuolar compartment membrane
messages: The sgr3-1 mutant has a reduced gravitropic response in inflorescence stem but a normal gravitropic response in hypocotyls. Reduced formation of vacuolar membrane 'bulbs'.
messages: Vacuole membrane

3702:AT1G33700
gene id: 3702:AT1G33700
uniprot id: A0A1P8AND8
uniprot id: A0A384KC76
uniprot id: F4HR96
names: Function
names: Similarity
messages: Belongs to the non-lysosomal glucosylceramidase family.
messages: Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.

3702:AT3G15095
gene id: 3702:AT3G15095
uniprot id: A0A384K8R0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G28330
gene id: 3702:AT1G28330
uniprot id: A0A178WKZ5
uniprot id: A0A178WL09
uniprot id: A0A654EDM5
uniprot id: B9DGG8
names: Disruption Phenotype
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the DRM1/ARP family.
messages: Circadian-regulation (PubMed:24442277). Down-regulated in axillary buds within 24 hours after decapitation and then up-regulated (PubMed:15908603). Down-regulated by the transcription factor ERF114 (PubMed:23616605). Down-regulated by cold (PubMed:24442277). Almost complete down-regulation by sucrose, fructose and glucose, but not by other sugars (PubMed:16463203). Up-regulated by heat and dark growth conditions (PubMed:24442277). Isoform 2: Up-regulated by salt. Isoform 4: Up-regulated by salt. Isoform 1: Not up-regulated by salt. Isoform 5: Not up-regulated by salt (PubMed:24442277).
messages: Isoform 1: Expressed mainly in the low bolt. Isoform 2: Expressed mainly in the low bolt. Detected in flowers. Isoform 4: Expressed mainly in the low bolt. Isoform 5: Expressed mainly in the 6 days old seedlings. Detected in 16 days old seedlings, axil, low bolt and floral samples, but only barely in leaves and top bolt.
messages: May be artifactual or particularly rare.
messages: No visible phenotype. Drm1 and drmh1 double mutants have no visible phenotype.
messages: Predicted to be an intrinsically disordered protein.

3702:AT4G00540
gene id: 3702:AT4G00540
uniprot id: Q9SPN3
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Aberrant circadian rhythms.
messages: Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells.
messages: Nucleus
messages: Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Required for proper circadian rhythm (PubMed:18426557).

3702:AT2G46230
gene id: 3702:AT2G46230
uniprot id: A0A178VYY9
uniprot id: A8MRJ0
uniprot id: O82346
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UTP23/FCF1 family. FCF1 subfamily.
messages: nucleolus

3702:AT2G27240
gene id: 3702:AT2G27240
uniprot id: A0A1P8B0R6
uniprot id: Q9XIN1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Malate transporter.
messages: Membrane

3702:AT1G72110
gene id: 3702:AT1G72110
uniprot id: F4IBP0
uniprot id: Q9C7H4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Membrane
messages: Mostly expressed in flowers and siliques and barely in roots and stems.
messages: Up-regulated in the stem epidermis during active wax synthesis.

3702:AT2G41640
gene id: 3702:AT2G41640
uniprot id: A0A178VQT8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G10890
gene id: 3702:AT5G10890
uniprot id: A0A1P8B9P9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Acts as a stomatal lineage scaffold which regulates subcellular localization and transient polarization of kinases (e.g. ASK7/BIN2 and ASK3/SK12) involved in asymmetric cell division (ACD) in a BASL-dependent manner.
messages: Cytoplasm
messages: Decreased accumulation of ASK7/BIN2 at the plasma membrane and impaired polarization of ASK7/BIN2 in asymmetric cell division (ACD) precursors thus leading to its nuclear localization in the meristemoids.
messages: cell cortex

3702:AT2G29870
gene id: 3702:AT2G29870
uniprot id: O82369
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Membrane

3702:AT3G45710
gene id: 3702:AT3G45710
uniprot id: A0A178VEQ2
uniprot id: Q9M172
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in the root epidermis or cortex.
messages: Membrane
messages: Transporter involved in a passive nitrate efflux.

3702:AT2G34290
gene id: 3702:AT2G34290
uniprot id: A0A654EYQ6
uniprot id: O80778
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT2G37650
gene id: 3702:AT2G37650
uniprot id: A0A1P8AXT9
uniprot id: A0A654EZQ5
uniprot id: O80933
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in cotyledons, leaves and flowers, and in the elongation zone in root.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT5G01960
gene id: 3702:AT5G01960
uniprot id: A0A654FXQ0
uniprot id: Q8L610
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G66510
gene id: 3702:AT5G66510
uniprot id: A0A178UKW8
uniprot id: Q94AU7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the gamma-class carbonic anhydrase family.
messages: Enzyme involved in the catabolism of H(2)CO(3) but that does not mediates the reversible hydration of carbon dioxide. Mediates complex I assembly in mitochondria and respiration (By similarity).
messages: Homotrimer (Probable). Component of the oxidoreductase respiratory chain complex I; element of the extra matrix-exposed domain, which is attached to the membrane arm of this complex.
messages: Mitochondrion membrane

3702:AT4G15250
gene id: 3702:AT4G15250
uniprot id: A0A654FPK3
uniprot id: O23379
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Nucleus

3702:AT1G62560
gene id: 3702:AT1G62560
uniprot id: A0A1P8APM2
uniprot id: Q9SXE1
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FMO family.
messages: Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates. Prefers probably short-chain methylthioalkyl glucosinolates in cv. Landsberg erecta.
messages: Down-regulated at late stage by auxin.
messages: In contrast to cv. Columbia, cv. Landsberg erecta has predominantly propyl C3 instead of butyl C4 Met-derived glucosinolates.
messages: Increased accumulation of methylthiopropyl glucosinolates in leaves and seeds.
messages: Membrane

3702:AT1G60160
gene id: 3702:AT1G60160
uniprot id: A0A178WH73
uniprot id: O80739
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Membrane
messages: Potassium transporter.
messages: Putative potassium transporter.

3702:AT5G25930
gene id: 3702:AT5G25930
uniprot id: Q9XGZ2
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT5G56795
gene id: 3702:AT5G56795
uniprot id: Q38803
names: Caution
names: Function
names: Similarity
messages: Belongs to the metallothionein superfamily. Type 15 family.
messages: Could be the product of a pseudogene.
messages: Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Confers tolerance to cadmium (Cd) and plays a role in Cd and zinc (Zn) homeostasis (PubMed:16240177).

3702:AT1G18880
gene id: 3702:AT1G18880
uniprot id: A0A178WEW3
uniprot id: Q9M9V7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Decreased nitrate content in root phloem exudates. Enhanced root-to shoot nitrate transport and plant growth under high nitrate conditions.
messages: Expressed in roots, stems and major veins of the leaves. Detected in the companion cells of the root phloem.
messages: Low-affinity nitrate transporter facilitating nitrate loading into root phloem. Not involved in dipeptides transport, but has a weak glucosinolate transport activity.
messages: Up-regulated by nitrate after long time exposure.

3702:AT3G19390
gene id: 3702:AT3G19390
uniprot id: Q9LT78
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase C1 family.
messages: Interacts with WSCP.
messages: Probable thiol protease.

3702:AT3G50130
gene id: 3702:AT3G50130
uniprot id: A0A384KJA1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G04570
gene id: 3702:AT1G04570
uniprot id: A0A178WE58
uniprot id: A0A1P8APB4
uniprot id: F4I5Q2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Folate-biopterin transporter (TC 2.A.71) family.
messages: Could mediate folate transport.
messages: Membrane
messages: chloroplast membrane

3702:AT3G24515
gene id: 3702:AT3G24515
uniprot id: Q941B6
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT1G12760
gene id: 3702:AT1G12760
uniprot id: Q9LN71
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Mediates E2-dependent protein ubiquitination in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G04080
gene id: 3702:AT4G04080
uniprot id: A0A5S9XQ26
uniprot id: O81433
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NifU family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Component of the core Fe-S cluster (ISC) assembly machinery.
messages: Mitochondrion matrix
messages: Mostly expressed in flowers and pollen, and, to a lower extent, in leaves and roots.
messages: Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (PubMed:17417719). First, a [2Fe-2S] cluster is transiently assembled on the scaffold protein ISCU (ISU1, ISU2 or ISU3). In a second step, the cluster is released from ISCU, transferred to a glutaredoxin, followed by the formation of mitochondrial [2Fe-2S] proteins, the synthesis of [4Fe-4S] clusters and their target-specific insertion into the recipient apoproteins. Cluster assembly on ISCU depends on the function of the cysteine desulfurase complex NFS1-ISD11, which serves as the sulfur donor for cluster synthesis, the iron-binding protein frataxin as the putative iron donor, and the electron transfer chain comprised of ferredoxin reductase and ferredoxin, which receive their electrons from NADH (By similarity).
messages: Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.

3702:AT1G29030
gene id: 3702:AT1G29030
uniprot id: A0A1P8AUI7
uniprot id: Q8GXH2
names: Similarity
messages: Belongs to the API5 family.

3702:AT5G13730
gene id: 3702:AT5G13730
uniprot id: A0A5S9Y4P4
uniprot id: Q9ZSL6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sigma-70 factor family.
messages: Mostly expressed in leaves, and to a lesser extent in roots. Present in seedlings.
messages: Reduced transcription of the plastid ndhF gene.
messages: Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released.
messages: Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. Regulates transcription of the ndhF gene which codes for a subunit of the plastid NDH [NAD(P)H dehydrogenase] complex.
messages: Slightly induced by blue light, especially after dark adaptation.
messages: chloroplast

3702:AT2G04880
gene id: 3702:AT2G04880
uniprot id: A0A654ERZ1
uniprot id: C0SV43
uniprot id: Q9SI37
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the WRKY group I family.
messages: Binding to target DNA is mediated mainly by the C-terminal WRKY domain, while part of the activation domain is located between positions 210 and 285.
messages: By salicylic acid (SA).
messages: Expressed to similar levels in root and flower, to a somewhat lower level in stem and to low levels in leaf and siliques.
messages: Nucleus
messages: Transcription factor. Binds to a 5'-CGTTGACCGAG-3' consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element.

3702:AT5G22410
gene id: 3702:AT5G22410
uniprot id: Q67ZE7
uniprot id: Q9FMR0
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Expressed in roots, slightly in leaves.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT5G65040
gene id: 3702:AT5G65040
uniprot id: A0A5S9YH30
uniprot id: Q9LV75
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FLZ family.
messages: Cytoplasm
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:24600465, PubMed:29945970). Interacts with KINB3 via its N-terminal part (PubMed:29945970). Interacts with GEBP (PubMed:24600465).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.
messages: Nucleus
messages: Overexpression of FLZ4/IRM1 rendered plants shorter which creates mechanical resistance to M.persicae aphid attack.
messages: Promoted M.persicae aphid population development.
messages: Up-regulated in response to mild as well as prolonged energy depletion.

3702:AT4G02030
gene id: 3702:AT4G02030
uniprot id: A0A654FLD9
uniprot id: F4JH69
uniprot id: Q0WQ75
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN).
messages: Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex is required for the maintenance of protein retrieval from endosomes to the TGN, acid hydrolase sorting, lysosome function, endosomal cholesterol traffic and autophagy. VPS51 participates in retrograde transport of acid hydrolase receptors, likely by promoting tethering and SNARE-dependent fusion of endosome-derived carriers to the TGN. Acts as component of the EARP complex that is involved in endocytic recycling. The EARP complex associates with Rab4-positive endosomes and promotes recycling of internalized transferrin receptor (TFRC) to the plasma membrane (By similarity). Required for vacuolar targeting and cellular trafficking. Involved in the regulation of vascular tissue patterning, probably by regulating PIN1 expression pattern, thus modulating auxin flux. Important to prevent PIN1 accumulation within margin cells, possibly by targeting PIN1 to the lytic vacuole. Regulates PIN1 and ATHB8 expression pattern in secondary veins (PubMed:24757006).
messages: Belongs to the VPS51 family.
messages: Component of the Golgi-associated retrograde protein (GARP) complex, composed by VPS51, VPS52, VPS53 and VPS54. Component of the endosome-associated retrograde protein (EARP) complex, composed of VPS51, VPS52, VPS53 and VPS50 (By similarity). Interacts with VPS52 (PubMed:24757006).
messages: Component of the Golgi-associated retrograde protein (GARP) complex.
messages: Expressed in primary and lateral roots, shoots of seedlings and flowers.
messages: In leaves, first observed at low levels in a diffuse pattern 3.5 days after germination (DAG), spreads throughout much of the lamina by 4 DAG and becomes increasingly restricted to presumptive veins from 5 to 8 DAG. Confined in epidermal cells of the proximal margins in mature leaves.
messages: Leaf vascular tissue patterning defects: simpler leaf venation with distal non-meeting of the secondary veins and fewer higher order veins, a narrower leaf with prominent serrations, and reduced root and shoot growth. Normal early endocytic events, but disrupted cellular trafficking. Reduced vacuolar targeting resulting in expanded expression of PIN1 in leaf margins and altered expression pattern of PIN1 and ATHB8 in secondary veins.
messages: Prevacuolar compartment
messages: Recycling endosome
messages: trans-Golgi network

3702:AT5G16710
gene id: 3702:AT5G16710
uniprot id: A0A178UIL9
uniprot id: Q8LE52
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GST superfamily. DHAR family.
messages: Displays a dual function. As a soluble protein, exhibits glutathione-dependent thiol transferase and dehydroascorbate (DHA) reductase activities (PubMed:12077129). Key component of the ascorbate recycling system. Involved in the redox homeostasis, especially in scavenging of ROS under oxidative stresses (By similarity).
messages: Monomer (By similarity). Interacts with TRX3.
messages: Partial S-glutathionylation and intramolecular disulfide bond formation between Cys-66 and Cys-69 in the presence of oxidized glutathione (GSSG). Could be reduced by TRX-dependent process.
messages: chloroplast stroma

3702:AT4G30140
gene id: 3702:AT4G30140
uniprot id: A0A178V2L8
uniprot id: Q9SZW7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G49390
gene id: 3702:AT3G49390
uniprot id: Q9SG10
names: Domain
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Expressed in cauline leaves, stems, rosette leaves, immature siliques and primary inflorescences.
messages: Nucleus

3702:AT2G22990
gene id: 3702:AT2G22990
uniprot id: A0A178VQT7
uniprot id: A8MQW0
uniprot id: A8MR78
uniprot id: F4IKK4
uniprot id: Q3EBW0
uniprot id: Q8RUW5
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 95% inhibition by diisopropyl fluorophosphate (DFP) and 30% by phenylmethylsulfonyl fluoride (PMSF).
messages: Belongs to the peptidase S10 family.
messages: Highly expressed in seedlings. Expressed in leaves, stems, flowers and siliques, and at low levels in roots.
messages: In cv. Pna-10, this protein SCP8 and the adjacent SCP10 are not present due to a natural 13-kb deletion (PubMed:19969522).
messages: Involved in plants secondary metabolism. Functions as acyltransferase to form the sinapate ester sinapoylmalate. Also capable of catalyzing the formation of 1,2-bis-O-sinapoyl beta-D-glucoside.
messages: May be due to a competing donor splice site.
messages: N-glycosylated.
messages: Plants do not contain sinapoylmalate and accumulate its biosynthetic precursor, sinapoylglucose.
messages: Vacuole
messages: Was classified as a serine carboxypeptidase-like (SCPL) protein solely on the basis of the overall sequence similarity (PubMed:15908604) but it has been shown that it belongs to a class of enzymes that catalyze acyltransferase reactions (PubMed:17600138).

3702:AT2G18520
gene id: 3702:AT2G18520
uniprot id: Q9ZU67
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G61910
gene id: 3702:AT3G61910
uniprot id: Q9M274
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Mostly expressed in anthers. Also present in pollen, base of siliques and inflorescence stems.
messages: Nucleus
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.
messages: Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulate the secondary cell wall lignification of other tissues such as tracheary elements.

3702:AT2G44030
gene id: 3702:AT2G44030
uniprot id: A0A178VZL5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G42800
gene id: 3702:AT2G42800
uniprot id: Q9SJH6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT1G33520
gene id: 3702:AT1G33520
uniprot id: A0A5S9WL97
uniprot id: Q9C801
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MOS2 family.
messages: Nucleus
messages: Required for innate and induced resistance to pathogens such as compatible and incompatible isolates of P.syringae and P.parasitica.

3702:AT1G16320
gene id: 3702:AT1G16320
uniprot id: A0A178WHZ2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G44230
gene id: 3702:AT5G44230
uniprot id: A0A1P8BHN8
uniprot id: Q9FFG8
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT1G75330
gene id: 3702:AT1G75330
uniprot id: A0A178W4A4
uniprot id: O50039
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
messages: chloroplast

3702:AT2G12465
gene id: 3702:AT2G12465
uniprot id: P82765
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G20770
gene id: 3702:AT3G20770
uniprot id: A0A178VGP6
uniprot id: O24606
names: Activity Regulation
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumuates upon hypoxia (e.g. submergences).
messages: Activated by phosphorylation by MPK3 and MPK6 (PubMed:18273012). Down-regulated by KIN10 that controls its protein stability under a phosphorylation-dependent manner (PubMed:28600557). Satnilitzed during hypoxia (e.g. submergences) via a ceramides-triggered and CTR1-dependent manner (PubMed:25822663).
messages: Acts as homodimer to bind the primary ethylene response element. Interacts with TAF12B. Interacts with KIN10 (PubMed:28600557). Binds to ENAP1 in the presence of ethylene; this reaction facilitates its association with histone (PubMed:27694846, PubMed:28874528).
messages: Belongs to the EIN3 family.
messages: Loss-of-function mutations (ein3-1 and ein3-2) in the gene lead to the suppression of ethylene-mediated effects including gene expression, the triple response, cell growth inhibition, and accelerated senescence.
messages: Nucleus
messages: Phosphorylated by KIN10.
messages: Transcription factor acting as a positive regulator in the ethylene response pathway, by promoting histone acetylation in an ENAP1-dependent manner, thus accelerating the expression of ethylene-responsive genes (PubMed:28874528). Binds DNA (PubMed:26352699). Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene.

3702:AT3G53620
gene id: 3702:AT3G53620
uniprot id: A0A178VKC0
uniprot id: Q9LFF9
names: Activity Regulation
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PPase family.
messages: Catalyzes the irreversible hydrolysis of pyrophosphate (PPi) to phosphate. The MgPPi(2-) complex binds to the enzyme only after a free Mg(2+) ion has bound. No activity with glycerol-3-phosphate, glucose-6-phosphate, p-nitrophenylphosphate, ADP, NADP(+), NAD(+),NADH, NADPH or phosphoribosyl pyrophosphate as substrates.
messages: Cytoplasm
messages: Expressed throughout plant development, with a lower expression in young plantes and a maximum during flowering.
messages: Inhibited by Zn(2+), Ca(2+), Ba(2+), Fe(2+), Co(2+), Cu(2+), Eu(2+), Eu(3+) and Mn(2+).
messages: Monomer.
messages: Ubiquitous, excepted in pollen. Very low expression in cork, xylem and hypocotyls.

3702:AT1G71010
gene id: 3702:AT1G71010
uniprot id: Q9SSJ8
names: Caution
names: Function
names: Subunit
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Lacks the FYVE domain, necessary to efficiently target the protein to membranes containing the phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity).

3702:AT5G46010
gene id: 3702:AT5G46010
uniprot id: F4KG06
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WUS homeobox family.
messages: Nucleus

3702:AT3G01280
gene id: 3702:AT3G01280
uniprot id: A0A178VE16
uniprot id: Q9SRH5
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.
messages: By the bacterial pathogen P.syringae pv. tomato.
messages: Consists mainly of membrane-spanning sided beta-sheets.
messages: Expressed in shoot meristems, root meristematic zone, lateral roots, leaves, stigma and anthers.
messages: Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity). Involved in plant development at reproductive stage, is important for pollen development and may regulate hydrogen peroxide generation during disease resistance.
messages: In vdac1-6 homozygous plants, normal growth, but small siliques and decreased pollen germination rate and tube length.
messages: Mitochondrion outer membrane

3702:AT1G16890
gene id: 3702:AT1G16890
uniprot id: A0A654ECH4
uniprot id: F4I615
uniprot id: Q9FZ48
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Required for postreplication repair of UV-damaged DNA and for adapting root developmental programs to suboptimal availability of iron.
messages: Interacts with yeast and human Mms2, with the RING domain of RGLG2 and with UEV1A, UEV1B, UEV1C and UEV1D.
messages: May be due to an intron retention.
messages: Not induced by iron.
messages: Partly functionally redundant with UBC35.
messages: Ubiquitously expressed at low level.

3702:AT3G19980
gene id: 3702:AT3G19980
uniprot id: A0A178VAH8
uniprot id: Q9LHE7
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PPP phosphatase family.
messages: Belongs to the PPP phosphatase family. PP-6 (PP-V) subfamily.
messages: Binds 2 zinc ions per subunit.
messages: Catalytic subunit of protein phosphatase 6 (PP6) (Probable). Dephosphorylates phosphorylated phytochromes, with a preference toward Pfr forms (PubMed:12468726). Plays a major role in the photoperiodic control of flowering time in long days by modulating phytochrome signals in flowering time control (PubMed:12468726). Involved in the regulation of polar auxin transport in roots (PubMed:22715043). Dephosphorylates directly the auxin efflux carriers PIN1 and PIN2, thus promoting their proper polar localization in root cell plasma membrane (PubMed:22715043). Acts antagonistically with the protein kinase PID to regulate the reversible phosphorylation of PIN and polar targeting, subsequently impacting polar auxin transport and plant development (PubMed:22715043). Involved in the regulation of abscisic acid (ABA) signaling during seed germination and postgermination seedling growth (PubMed:23404889). Functions as negative regulator of ABA signaling through direct dephosphorylation and destabilization of ABI5 protein (PubMed:23404889). Acts antagonistically with the protein kinase SRK2E/SNRK2.6 to regulate ABI5 phosphorylation and ABA responses (PubMed:23404889). Involved in the regulation of phosphorylation status in hypocotyl phototropism (PubMed:30373470). Involved in the negative regulation of photomorphogenesis by controlling the stability and transcriptional activity of PIF3 and PIF4 proteins in the dark, via the regulation of their phosphorylation status (PubMed:31527236).
messages: Cytoplasm
messages: Early flowering (PubMed:12468726). No visible phenotype under normal growth conditions, but the double mutant plants fypp1 and fypp3 exhibit severe developmental defects in roots and leaves, and show defective gravitropism (PubMed:22715043).
messages: Interacts with PHYA and PHYB, mostly when they are phosphorylated and in Pfr forms (PubMed:12468726). Interacts with TAP46 (PubMed:24357600, PubMed:12468726). Interacts with NRP (PubMed:24357600). Interacts with PIN1 and PIN2 (PubMed:22715043). Interacts with ABI5 (PubMed:23404889). Interacts with PIF3 and PIF4 (PubMed:31527236). Protein phosphatase 6 (PP6) holoenzyme is a heterotrimeric complex formed by the catalytic subunit FYPP, a SAPS domain-containing subunit (SAL) and a protein phosphatase 2A regulatory subunit A (PP2AA) (PubMed:22715043).
messages: Mostly expressed in flowers (PubMed:12468726). Also detected to a lower extent in stems and leaves (PubMed:12468726). Expressed in roots (PubMed:22715043).

3702:AT4G21080
gene id: 3702:AT4G21080
uniprot id: O49550
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

3702:AT5G09690
gene id: 3702:AT5G09690
uniprot id: A0A1P8BF59
uniprot id: A0A1P8BF64
uniprot id: A0A1P8BF71
uniprot id: A0A1P8BF76
uniprot id: A0A1P8BF83
uniprot id: A0A1P8BFB5
uniprot id: A0A1P8BFC1
uniprot id: Q304A0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.
messages: Displays plantlets with retarded development under low Mg(2+) concentrations growth conditions.
messages: Endoplasmic reticulum membrane
messages: Has the ability to complement mutants in Salmonella enterica and yeast lacking magnesium transport capability.
messages: Isoform 1 is expressed in the whole plant. Isoform 4 is expressed only in roots and flowers.
messages: Low-affinity magnesium transporter that mediates the influx of magnesium.
messages: Magnesium transporter that may mediate the influx of magnesium.
messages: Membrane
messages: Sequencing errors.

3702:AT3G10190
gene id: 3702:AT3G10190
uniprot id: Q9SS31
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.5, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT3G20640
gene id: 3702:AT3G20640
uniprot id: A0A178VHE4
uniprot id: A0A1I9LLG5
uniprot id: A0A1I9LLG6
uniprot id: A0A1I9LLG7
uniprot id: Q8GXT3
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT4G26860
gene id: 3702:AT4G26860
uniprot id: A0A7G2F2Q2
uniprot id: F4JVS4
uniprot id: Q94JS1
names: Function
names: Similarity
messages: Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
messages: Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'-phosphate (PLP), the active form of vitamin B6.

3702:AT2G38950
gene id: 3702:AT2G38950
uniprot id: Q8L7T6
names: Caution
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Expressed in inflorescences, roots, siliques, leaves and stems.
messages: Lacks the 2 conserved His residues involved in iron binding and essential for dioxygenase activity. Its enzyme activity is therefore unsure.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT2G24450
gene id: 3702:AT2G24450
uniprot id: A0A178W0S4
uniprot id: Q9ZQ23
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT1G77030
gene id: 3702:AT1G77030
uniprot id: A0A178WHB7
uniprot id: O49289
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G04980
gene id: 3702:AT1G04980
uniprot id: Q9MAU6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.
messages: Belongs to the protein disulfide isomerase family.
messages: By chemically-induced ER stress response.
messages: Endoplasmic reticulum lumen
messages: Widely expressed.

3702:AT3G47730
gene id: 3702:AT3G47730
uniprot id: A0A178V6R6
uniprot id: Q84K47
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Membrane

3702:AT4G21120
gene id: 3702:AT4G21120
uniprot id: A0A178UYU0
uniprot id: A0A1P8B561
uniprot id: Q84MA5
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Expressed in roots, stems, flowers, petioles, seeds, siliques, and leaves. Mostly present in major veins.
messages: High-affinity permease involved in the transport of the cationic amino acids (e.g. arginine, lysine, histidine, citrulline, valine, and glutamate). Transport mostly basic amino acids, and, to a lower extent neutral and acidic amino acids. May function as a proton symporter.
messages: Inhibited by the protonophore 2,4-dinitrophenol.
messages: Membrane

3702:AT2G14255
gene id: 3702:AT2G14255
uniprot id: Q3EC11
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Expressed in roots, shoots, flowers and pollen.
messages: Golgi apparatus membrane
messages: Palmitoyl acyltransferase.
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT5G09500
gene id: 3702:AT5G09500
uniprot id: Q0WSM9
uniprot id: Q9FY65
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Cytoplasm

3702:AT2G46680
gene id: 3702:AT2G46680
uniprot id: A0A654F7Q4
uniprot id: F4IJ86
uniprot id: P46897
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: By water deficit, by abscisic acid (ABA) and by salt stress.
messages: Interacts with TBP2 and TFIIB1.
messages: Nucleus
messages: Probable transcription activator that may act as growth regulators in response to water deficit.
messages: Transcription factor.
messages: Widely expressed.

3702:AT1G18280
gene id: 3702:AT1G18280
uniprot id: A0A178WKI3
uniprot id: Q9LE56
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Inability to limit tetrazolium salt uptake in seeds, development of hair-like structures on seeds, altered pollen morphologies, deformed or collapsed, and decreased levels of omega-hydroxy fatty acids in seed coats.
messages: Lipid transfer protein involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition.
messages: Membrane
messages: Restricted to stamen, pollen and sporophytic tissues (PubMed:14671020, PubMed:24460633). Also detected, at low levels, in stems and leaves (PubMed:14671020).

3702:AT5G66020
gene id: 3702:AT5G66020
uniprot id: Q7X911
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By salt stress.
messages: Endoplasmic reticulum membrane
messages: Impaired in BABA-induced sterility (ibs) and BABA-induced protection against P.syringae, H.parasitica, and salt. Affected in the priming for callose deposition.
messages: Phosphoinositide phosphatase that hydrolyzes PtdIns(3)P and PtdIns(4)P. Involved in priming for different defense responses.
messages: Predominantly expressed in flowers.
messages: The phosphatase catalytic core motif (or RXNCXDCLDRTN motif) from the SAC domain is found in metal-independent protein phosphatases and inositol polyphosphate phosphatases.

3702:AT5G19240
gene id: 3702:AT5G19240
uniprot id: Q84VZ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0277 family.
messages: Cell membrane

3702:AT5G16810
gene id: 3702:AT5G16810
uniprot id: A0A178U9S3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G34180
gene id: 3702:AT4G34180
uniprot id: A0A178V1W8
uniprot id: Q93V74
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a negative regulator of fumonisin B1- and pathogen-induced programmed cell death (PCD), and regulates pathogen-induced symptom development (PubMed:25862728). May function redundantly with CYCLASE2 for normal plant growth, development and viability (Probable).
messages: Belongs to the Cyclase 1 superfamily.
messages: Induced by salicylate.
messages: No visible phenotype under normal growth conditions, but leaves of mutant plants exhibit a severly increased cell death when exposed to fumonisin B1 or a bacterial pathogen that triggers the defensive hypersensitive cell death. The double mutants cyclase1 and cyclase2 are embryonic lethal.
messages: extracellular matrix

3702:AT1G60490
gene id: 3702:AT1G60490
uniprot id: A0A654EJR0
uniprot id: P42339
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subunit
messages: Belongs to the PI3/PI4-kinase family.
messages: Homozygous mutants are lethal (PubMed:25628629). In hemizygous mutants, increased expression of ProDH1 (PubMed:25628629). Reduced proline accumulation in response to salt (NaCl) (PubMed:25628629).
messages: Induced by salicylic acid (SA) and upon infection by the incompatible bacterial pathogen Pseudomonas syringae pv tomato DC3000 (avrRpt2).
messages: Interacts with VPS15 (PubMed:22361507). Component of a complex made of VPS38/USL1 and PI3K main subunits such as VPS15, ATG6/VPS30 and VPS34 (PubMed:29897620). Binds directly to VPS38/USL1 (PubMed:29184027).
messages: Involved in the negative regulation of proline, hydrophobic and aromatic amino acids accumulation, especially in response to salt (NaCl), either through inhibition of their synthesis and/or promotion of their catabolism (PubMed:25628629). Triggers defense responses (e.g. pathogenesis related (PR1 and PR5) gene expression and hydrogen peroxide H(2)O(2) burst) to the bacterial pathogen compatible Pseudomonas syringae pv tomato DC3000 (Pst DC3000) and incompatible Pst DC3000 (avrRpt2), by regulating reactive ogygen species (ROS) production and by promoting stomatal closure (PubMed:32117334).
messages: The PI3K inhibitor LY294002 affects phosphatidylinositol 3-phosphate (PI3P) levels and triggers a decrease in proline, hydrophobic and aromatic amino acids, and sugars (e.g. raffinose) accumulation in response to salt treatment correlated with lower P5CS1 expression and higher ProDH1 expression, genes involved in proline biosynthesis and catabolism, respectively.

3702:AT2G46110
gene id: 3702:AT2G46110
uniprot id: A0A7G2EHT3
uniprot id: O82357
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PanB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.
messages: Mitochondrion

3702:AT2G36410
gene id: 3702:AT2G36410
uniprot id: A0A178VU90
uniprot id: A0A178VVX8
uniprot id: Q2V422
uniprot id: Q3EBM1
uniprot id: Q9SJR4
names: Similarity
messages: Belongs to the GORAB family.

3702:AT4G10110
gene id: 3702:AT4G10110
uniprot id: Q8GW25
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G23405
gene id: 3702:AT5G23405
uniprot id: Q941D1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HMGB family.
messages: Nucleus

3702:AT3G22000
gene id: 3702:AT3G22000
uniprot id: A0MEX7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT5G57270
gene id: 3702:AT5G57270
uniprot id: A0A384KTN7
uniprot id: Q8W4D1
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G15830
gene id: 3702:AT3G15830
uniprot id: Q9LVZ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphatidylcholine:diacylglycerol cholinephosphotransferase family.
messages: Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase that catalyzes the transfer of the phosphocholine headgroup from phosphatidylcholine (PC) to diacylglycerol, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway.
messages: Membrane

3702:AT4G27490
gene id: 3702:AT4G27490
uniprot id: A2RVK7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RNase PH family.
messages: Cytoplasm
messages: Extremely slow growth, especially during the early stage of development.
messages: Highly expressed in imbibed seeds and young seedlings.
messages: Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is a processive phosphorolytic exonuclease and requires a single-stranded poly(A) tail on the substrate RNA for its activity (By similarity). Plays an important role in seed germination and early seedling growth by mediating specific cytoplasmic mRNA decay of transcripts coding for the abscisic acid (ABA) biosynthetic enzymes NCED5 and NCED6, and the ABA signaling transcription factors ABI3 and ABI4 (PubMed:23132787).
messages: Nucleus
messages: Probable component of the RNA exosome complex.

3702:AT4G10180
gene id: 3702:AT4G10180
uniprot id: P48732
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DET1 family.
messages: Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes (E2s). Involved in repression of deetiolation in the developing seedling. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5, HYH and LAF1. Involved in the repression of blue light responsive promoter in chloroplasts. May be required to stabilize the CDD complex. Its association with histone tail suggests a role in remodeling of chromatin (PubMed:9681024, PubMed:15342494). Required for the regulation of histone H2B monoubiquitination (H2Bub) over most genes by controlling the stability of the deubiquitination module (DUB module) (PubMed:30192741).
messages: Component of the CDD complex, at least composed of COP10, DET1 and DDB1A (PubMed:15342494, PubMed:24563205). Interacts with DDB1A (PubMed:12225661). Interacts with non-acetylated N-terminal tail of histone H2B in a nucleosome context (PubMed:12225670).
messages: nucleoplasm

3702:AT5G57850
gene id: 3702:AT5G57850
uniprot id: Q8L493
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Amino acid aminotransferase showing activity for D-Asp and D-Ala as amino donors with 2-oxoglutarate as an amino acceptor. Can also use D-Met, D-Tyr, D-Phe, D-Gln, D-Trp and D-Asn as substrates, but no activity with L-Asp, L-Ala, L-Leu, L-Ile or L-Val. Catalyzes also the reverse reaction where an amino group is transferred from D-Glu to pyruvate or oxaloacetate to produce D-Ala or D-Asp, respectively. Also involved in folate biosynthesis, acting as an aminodeoxychorismate lyase converting 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate (PABA)(PubMed:15500462).
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.
messages: Inhibited by hydroxylamine or amino-oxyacetic acid.
messages: chloroplast

3702:AT5G08160
gene id: 3702:AT5G08160
uniprot id: A0A178UQ32
uniprot id: O04265
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT1G30480
gene id: 3702:AT1G30480
uniprot id: A0A178W6S6
uniprot id: P42698
names: Function
names: Subcellular Location Annotation
messages: Seems to be involved in the resistance to UV light and chemical DNA-damaging agents (PubMed:8479917). Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (PubMed:25267732).
messages: chloroplast

3702:AT4G35783
gene id: 3702:AT4G35783
uniprot id: A0A178V547
uniprot id: Q6IM84
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT2G16890
gene id: 3702:AT2G16890
uniprot id: A0A1P8AYT8
uniprot id: Q9ZVX4
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT5G09740
gene id: 3702:AT5G09740
uniprot id: A0A178U8L6
uniprot id: Q9LXD7
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autoacetylation at Lys-269 is required for proper function.
messages: Belongs to the MYST (SAS/MOZ) family.
messages: Expressed in cotyledons, leaves, stems, roots and, at higher levels in developing flowers, particularly in the anthers and gynoecia (PubMed:19040736). Constitutively expressed in all tissues, predominantly in shoot apical meristem (PubMed:23273925).
messages: Histone acetyltransferase which may be involved in transcriptional activation. Acetylates 'Lys-5' of histone H4 (H4K5ac) (PubMed:16648464, PubMed:17877703). Essential for gametophyte development (PubMed:19040736). Negative regulator of flowering controlling the H4K5ac levels in the FLC chromatin (PubMed:23273925).
messages: Interacts with MRG1 and MRG2.
messages: Knockdown expression of both HAM1 and HAM2 results in earlier flowering.
messages: No visible phenotype, due to the redundancy with HAM1. Ham1 and ham2 double mutants are lethal.
messages: Nucleus
messages: Up-regulated upon UV-B exposure.

3702:AT2G25355
gene id: 3702:AT2G25355
uniprot id: A0A178VR99
uniprot id: A8MQZ8
uniprot id: Q94AW9
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRP40 family.
messages: Cytoplasm
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus

3702:AT5G59680
gene id: 3702:AT5G59680
uniprot id: Q9FN93
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT4G00238
gene id: 3702:AT4G00238
uniprot id: Q8LG05
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GeBP family.
messages: Expressed strongly in leaves and flowers, weakly in roots, and very weakly in stems.
messages: Nucleus
messages: Transcription repressor that binds DNA in a sequence-specific manner, 5'-GCCT-3', to regulate the expression of PGR. Acts as a modulatory component for the glucose-triggered developmental leaf growth process.
messages: Up-regulated upon glucose treatment.

3702:AT5G13050
gene id: 3702:AT5G13050
uniprot id: A0A178UBC3
uniprot id: Q8L539
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
messages: Contributes to tetrahydrofolate metabolism and photorespiration through the regulation of serine hydroxymethyltransferase. Prefers the pentalutamyl to the monoglutamyl form of 5-formyltetrahydrofolate.
messages: Mitochondrion
messages: Monomer.
messages: Reduced growth rate and delayed flowering.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G61910
gene id: 3702:AT5G61910
uniprot id: F4K518
names: Similarity
messages: Belongs to the copine family.

3702:AT2G19820
gene id: 3702:AT2G19820
uniprot id: O82198
names: Similarity
messages: Belongs to the LOB domain-containing protein family.

3702:AT1G29100
gene id: 3702:AT1G29100
uniprot id: Q9LP41
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT1G72810
gene id: 3702:AT1G72810
uniprot id: A0A178WMN0
uniprot id: Q9SSP5
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by S-adenosyl-methionine (SAM).
messages: Belongs to the threonine synthase family.
messages: Binds 4 S-adenosyl-L-methionine (SAM) molecules per dimer. Although SAM3 and SAM4 have equivalent positions, their interactions with the protein are not identical. SAM3 interacts with Lys-172 and Asn-178 of monomer B, whereas SAM4 interacts only with Lys-172 of monomer A (By similarity).
messages: Catalyzes the gamma-elimination of phosphate from L-phosphohomoserine and the beta-addition of water to produce L-threonine.
messages: Homodimer.
messages: Much less active than TS1 at physiological concentrations of S-adenosyl-methionine (20 uM).
messages: chloroplast

3702:AT3G12760
gene id: 3702:AT3G12760
uniprot id: A0A384L8L9
uniprot id: Q9LTV9
names: Function
messages: Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

3702:AT5G07990
gene id: 3702:AT5G07990
uniprot id: A0A178UNZ9
uniprot id: Q9SD85
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By UV light treatment.
messages: Catalyzes the 3'-hydroxylation of the flavonoid B-ring to the 3',4'-hydroxylated state. Convert naringenin to eriodictyol and dihydrokaempferol to dihydroquercetin.
messages: Endoplasmic reticulum membrane
messages: High expression in siliques and to a lower extent in stems, flowers and senescing leaves.
messages: May act as a membrane anchor for localization of other, soluble, flavonoid enzymes to the endoplasmic reticulum.

3702:AT5G66730
gene id: 3702:AT5G66730
uniprot id: Q9LVQ7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: At 3 days post anthesis (DPA), expressed in the chalazal endosperm region. By 6 DPA, expressed in the endosperm and embryo. In fully germinated seed, strongest expression in the root tip and not detected in the cotyledons. In 4-days old seedlings, restricted to the vasculature of the cotyledons, the shoot apical meristem region, and the root tip. By 8 days, restricted to newly emerged leaves.
messages: Interacts with the DELLA proteins (e.g. GAI/RGA2, RGA, RGL1, RGL2 and RGLG3), acting as coactivators.
messages: Nucleus
messages: Plants lacking both ENY/IDD1 and IDD2/GAF1 have a decreased responsiveness to gibberellic acid (GA).
messages: Strongly up-regulated during seed development.
messages: Transcription factor promoting the transition to germination by regulating light and hormonal signaling during seed maturation (PubMed:21571950). Acts as a positive regulator of phytochrome and/or gibberellin action (PubMed:21571950, PubMed:25035403).

3702:AT5G12040
gene id: 3702:AT5G12040
uniprot id: A0A178UA06
uniprot id: Q8RUF8
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: 2-fold higher levels of alpha-ketosuccinamate and 3-fold higher levels of alpha-hydroxysuccinamate.
messages: Belongs to the nitrilase superfamily. NIT1/NIT2 family.
messages: Down-regulated in roots after treatment with asparagine.
messages: Omega-amidase involved in the metabolism of asparagine. Probably also closely coupled with glutamine transamination in the methionine salvage cycle. Can use alpha-ketosuccinamate and alpha-hydroxysuccinamate as substrates, producing respectively oxaloacetate and malate, or alpha-ketoglutaramate, producing alpha-ketoglutarate.
messages: The T-DNA insertion may still allow the production of a functional cytosolic form of the protein, if translation is initiated from the second initiation codon, encoding Met-63 in the full-length protein.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT4G35820
gene id: 3702:AT4G35820
uniprot id: Q9SZT0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P4HA family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins.
messages: Endoplasmic reticulum membrane

3702:AT1G61780
gene id: 3702:AT1G61780
uniprot id: A0A178W7E2
uniprot id: Q9SYB4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CRIPT family.
messages: Cytoplasm

3702:AT1G43171
gene id: 3702:AT1G43171
uniprot id: Q1G3Z6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G63590
gene id: 3702:AT1G63590
uniprot id: Q9SH43
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G11925
gene id: 3702:AT1G11925
uniprot id: O65387
names: Similarity
messages: Belongs to the STIG1 family.

3702:AT5G02830
gene id: 3702:AT5G02830
uniprot id: A0A5S9Y0V2
uniprot id: Q8GYL7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: chloroplast

3702:AT2G24550
gene id: 3702:AT2G24550
uniprot id: Q945P6
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor (By similarity). Promotes slightly the tolerance to cadmium (Cd) and to oxidizing chemicals (e.g. diamide) (PubMed:18980652).

3702:AT1G08710
gene id: 3702:AT1G08710
uniprot id: Q9CAZ0
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT1G62830
gene id: 3702:AT1G62830
uniprot id: Q8VXV7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the flavin monoamine oxidase family.
messages: Cytoplasm
messages: Expressed in the shoot and root apical regions of young seedlings. Expressed in cotyledons and inflorescences.
messages: Interacts with CZS (PubMed:17224141). Interacts with OTU6/OTLD1 (PubMed:21690391).
messages: Nucleus
messages: Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA (PubMed:17921315). Seems to act in partial redundancy with FLOWERING LOCUS D (FLD) to repress FLC expression (PubMed:17921315). Required for cytosine methylation of FWA (PubMed:17921315). Controls primary seed dormancy by regulating DOG1 and abscisic acid signaling-related genes (PubMed:25852712). In association with OTU6/OTLD1, involved in transcriptional gene repression via histone deubiquitination and demethylation (PubMed:21690391).
messages: Up-regulated expression of GLP2A/GLP5A due to derepression associated with hyperubiquitination of the target chromatin and H3K4 hypermethylation.

3702:AT5G01500
gene id: 3702:AT5G01500
uniprot id: Q9M024
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Expressed in dark-grown seedlings and remains stable throughout the greening process. Highest expression in developing green tissues and in leaves undergoing senescence or abiotic stress, with the exception of heat shock conditions that induced a drastic reduction of expression.
messages: Highly expressed in developing photosynthetic organs such as leaves, flower buds and green siliques. Also detected in roots, flowers, mature leaves and stems.
messages: KM and Vmax values toward ATP only are increased by m-chlorocarbonyl cyanide phenylhydrazone (CCCP). The corresponding values for ADP are not affected.
messages: Plants show a 30-40% reduction in the thylakoid ATP transport and metabolism.
messages: Specifically transports adenine nucleotides. Involved in the uptake of ATP into thylakoids in exchange for lumenal ADP.
messages: chloroplast envelope
messages: chloroplast thylakoid membrane

3702:AT3G29000
gene id: 3702:AT3G29000
uniprot id: Q9MBG5
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT4G27470
gene id: 3702:AT4G27470
uniprot id: A0A178V4H3
uniprot id: Q8GUK7
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: No visible phenotype and no effect on drought stress response, probably due to the redundancy with RMA1 and RMA2.
messages: The RING-type zinc finger domain is required for E3 ligase activity.
messages: The RING-type zinc finger domain is responsible for E3 ligase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous. Highly expressed in roots.

3702:AT1G55520
gene id: 3702:AT1G55520
uniprot id: A0A178WDQ6
uniprot id: A0A1P8APV5
uniprot id: P28148
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TBP family.
messages: Belongs to the TFIID complex together with the TBP-associated factors (TAFs). Binds DNA as monomer. Interacts with TAF1 (via N-terminus) (PubMed:17340043). Interacts with TFIIB1 (PubMed:10634912). Interacts with PTF2 (PubMed:23713077). Interacts with HAT5/ATHB-1 and ATHB-7 (PubMed:24531799). Component of a nuclear protein complex containing at least TATA binding proteins (TBPs, e.g. TBP1 and TBP2) and ATX1 (PubMed:21266657).
messages: General transcription factor (GTF) that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II (By similarity). Interacts with TFIIB1 and is required for activated transcription and possibly basal transcription (PubMed:10634912). May act as GTF of RNA polymerase I-dependent transcription and rRNA synthesis. Forms a ternary complex with PBRP1 and the rDNA promoter region (PubMed:18668124).
messages: Nucleus

3702:AT2G09990
gene id: 3702:AT2G09990
uniprot id: A0A178W2C4
uniprot id: Q9SK22
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

3702:AT3G21460
gene id: 3702:AT3G21460
uniprot id: A0A178VFQ2
uniprot id: Q9LIF1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.
messages: Nucleus

3702:AT4G23520
gene id: 3702:AT4G23520
uniprot id: F4JNL3
names: Function
names: Similarity
messages: Belongs to the peptidase C1 family.
messages: Probable thiol protease.

3702:AT1G36280
gene id: 3702:AT1G36280
uniprot id: F4I1L9
uniprot id: Q8GUN7
names: Similarity
messages: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.

3702:AT5G51050
gene id: 3702:AT5G51050
uniprot id: Q9FI43
names: Activity Regulation
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Calcium-dependent mitochondrial carrier protein that catalyzes the import of ATP co-transported with metal divalent cations across the mitochondrial inner membrane in exchange for phosphate (Pi) (PubMed:22062157, PubMed:28695448, PubMed:26140942, PubMed:26444389). Can transport phosphate, AMP, ADP, ATP, adenosine 5'-phosphosulfate, sulfate and thiosulfate, and, to a lesser extent, other nucleotides (PubMed:26140942, PubMed:26444389). Binds calcium ions Ca(2+) (PubMed:22062157). Mediates also calcium uptake (PubMed:26444389).
messages: Counter-exchange transport activity is saturable and inhibited by pyridoxal-5'-phosphate, EDTA and EGTA (PubMed:26140942, PubMed:26444389). Activated by calcium Ca(2+) and manganese Mn(2+) ions, and slightly by iron Fe(2+) and zinc Zn(2+) ions (PubMed:26140942, PubMed:28695448, PubMed:26444389). Repressed by copper ions Cu(2+) and slightly by magnesium Mg(2+) ions (PubMed:28695448). Magnesium Mg(2+) ions promotes slightly ATP uptake, ATP-Mg(2+) being exchanged with ATP(4-) (PubMed:26444389).
messages: Expressed in flowers, leaves, stems, roots and seedlings, mostly in aerial parts.
messages: Mitochondrion inner membrane
messages: Slightly expressed in flower petals.
messages: The N-terminal domain can bind calcium.

3702:AT5G04740
gene id: 3702:AT5G04740
uniprot id: A0A178UNY1
uniprot id: F4JXP5
uniprot id: Q9LZ23
names: Function
names: Subcellular Location Annotation
messages: Binds amino acids.
messages: May be involved in feedback regulation of amino acid metabolism.
messages: chloroplast

3702:AT2G47610
gene id: 3702:AT2G47610
uniprot id: A0A178VV73
uniprot id: P49692
names: Caution
names: Function
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL8 family.
messages: Component of the ribosome.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G52950
gene id: 3702:AT1G52950
uniprot id: Q9C926
names: Similarity
messages: Belongs to the replication factor A protein 1 family.

3702:AT3G46950
gene id: 3702:AT3G46950
uniprot id: Q9STG7
names: Similarity
messages: Belongs to the mTERF family.

3702:AT4G20350
gene id: 3702:AT4G20350
uniprot id: A0A1P8B5Q3
uniprot id: A0A1P8B5R1
uniprot id: F4JUV5
uniprot id: Q9SUP1
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Accumulates under a salt stress (PubMed:32933187). Reduced levels during cold stress (PubMed:32933187). Seems not influenced by heat, drought and abscisic acid (ABA) (PubMed:32933187).
messages: Belongs to the alkB family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Faster germination of seeds under cold, salt and abscisic acid (ABA) treatment conditions, but not upon dehydration stress (PubMed:32933187). Reduced survival rate under drought and heat stresses, but increased resistance to salt (PubMed:32933187). Enhanced cotyledon greening after ABA application associated with reduced transcript levels of ABA signaling-related genes (e.g. ABI3 and ABI4) (PubMed:32933187).
messages: Nucleus
messages: Probable RNA demethylase that binds to both N6-methyladenosine-containing- (m(6)A) and C5-methylcytidine-containing- (m(5)C) RNAs, thus being a probable m(6)A and m(5)C eraser (PubMed:32933187). Involved in responses to abscisic acid (ABA) via the modulation of the expression of ABA signaling-related genes (e.g. ABI3 and ABI4) (PubMed:32933187). Acts as a negative regulator during seed germination under abiotic stresses (e.g. salt, cold and ABA) (PubMed:32933187). Positive modulator of seedling growth and survival in response to drought and heat, but counteracts tolerance to salt (PubMed:32933187).

3702:AT5G42890
gene id: 3702:AT5G42890
uniprot id: Q9FMN0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates at higher levels in dark-grown seedlings (PubMed:18687588). Induced by sucrose (PubMed:18687588).
messages: Altered seed morphology and delayed seed germination as well as inhibited root elongation in the dark; an exogenous carbon source is required to recover from the delayed seedling establishment. Reduced levels of glutamine, pyroglutamic acid, aspartate, beta-alanine, fumaric acid, glyceraldehyde and ribose, but increased accumulation of serine, glycine, asparagine, 3-cyanoalanine and 5-methylthiopentanitrile.
messages: Enhances the transfer of lipids between membranes in vitro (PubMed:15456765). Active on phosphatidylcholine (PC), 1-palmitoyl 2-oleoyl phosphatidylcholine (POPC) and ergosterol, and, to a lower extent, dimyristoyl phosphatidic acid, stigmasterol, desmosterol, beta-sitosterol and steryl glucoside (PubMed:15456765). Inactive or poorly active on palmitic acid, stearoyl-coenzyme A, cholesterol, glucosylceramide and ceramide (PubMed:15456765). Required during seeds and seedlings development (PubMed:18687588).
messages: Expressed in most tissues including seedlings, cotyledons, inflorescence, leaves, stems, roots, siliques and flower buds, with the highest levels in floral tissues and in maturing seeds.
messages: In seeds, observed mainly in the endosperm and the embryo (PubMed:18687588). In seedlings, detected in vascular tissues and hydathodes of cotyledons (PubMed:18687588). Later expressed in trichomes of rosette leaves (PubMed:18687588). In flowers, accumulates in the receptacles, in vascular tissues of sepals and petals, in the style and stigma of the carpels, and in anthers, filaments, and pollen (PubMed:18687588). Also present in siliques funiculi (PubMed:18687588).
messages: Peroxisome

3702:AT4G00020
gene id: 3702:AT4G00020
uniprot id: Q7Y1C5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subunit
names: Tissue Specificity
messages: A number of isoforms are produced. According to EST sequences.
messages: Expressed in flower buds.
messages: Interacts with RAD51 and DMC1 (PubMed:15014444, PubMed:16415210). Interacts with DSS1(I) (PubMed:16415210).
messages: Involved in double-strand break repair and/or homologous recombination by mediating RAD51- and DMC1-facilitated DNA repair. Plays an essential role in both somatic and meiotic homologous recombination. Is crucial for the formation of RAD51 and DMC1 foci during male meiotic homologous recombination in prophase I.
messages: No visible phenotype under normal growth conditions, but the double mutants brca2a and brca2b are sterile due to aberrant chromosome aggregates, chromosomal fragmentation and missegregation during meiosis.

3702:AT1G67980
gene id: 3702:AT1G67980
uniprot id: A0A178WKR5
uniprot id: F4HVJ6
uniprot id: Q9C9W3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family.
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family. CCoAMT subfamily.
messages: Binds 1 divalent metal cation per subunit.
messages: Methylates caffeoyl-CoA to feruloyl-CoA and 5-hydroxyferuloyl-CoA to sinapoyl-CoA. Plays a role in the synthesis of feruloylated polysaccharides. Involved in the reinforcement of the plant cell wall. Also involved in the responding to wounding or pathogen challenge by the increased formation of cell wall-bound ferulic acid polymers (By similarity).

3702:AT5G50420
gene id: 3702:AT5G50420
uniprot id: A0A178UB35
uniprot id: Q9FK30
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT4G27420
gene id: 3702:AT4G27420
uniprot id: A0A178V178
uniprot id: Q9SZR9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Cell membrane
messages: Homodimer (PubMed:24112720). Forms heterodimers with ABCG11 (PubMed:24112720).
messages: In roots, observed in the central cylinder (PubMed:24112720). Restricted to the petiole main vein (PubMed:24112720). Present in rosette leaves vascular system (PubMed:24112720). Expressed transiently during flower develoment in the anthers and developing siliques, mostly in the tapetal cell layer during pollen maturation (PubMed:24474628). Also observed in phloem cells of the flower stem (PubMed:24112720).
messages: Membrane
messages: Pollen grains of the double mutant abcg9 abcg31 shrivel up and collapse upon exposure to dry air, and exhibit an immature coat containing reduced levels of steryl glycosides, thus leading to a low viability (PubMed:24474628). Defective in sterol (e.g. 24-methylene cholesterol) composition (PubMed:24112720). Vascular patterning defects in cotyledons and the floral stem, with a stronger phenotype in plant missing also ABCG11 and ABCG14 (PubMed:24112720).
messages: Present in flowers and siliques, at lower levels in leaves and stems, but barely in roots (PubMed:24474628, PubMed:24112720). Accumulates in the phloem (PubMed:24112720). Highly expressed in the tapetum of anthers (PubMed:24474628, PubMed:27634427).
messages: Together with ABCG31, involved in pollen coat deposition of steryl glycosides required for pollen fitness (PubMed:24474628). Together with ABCG11 and ABCG14, required for vascular development by regulating lipid/sterol homeostasis (PubMed:24112720).

3702:AT5G19180
gene id: 3702:AT5G19180
uniprot id: A0A1P8BGN7
uniprot id: O65041
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-activating E1 family. UBA3 subfamily.
messages: Catalytic subunit of the dimeric E1 enzyme, which activates NEDD8.
messages: Catalytic subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (By similarity).
messages: Expressed during ovules and embryo development.
messages: Expressed in shoot, root and floral meristems, in vascular tissues of cotyledons and mature leaves, and in the stele of the root.
messages: Heterodimer of UBA3/ECR1 and AXR1. Interacts with NEDD8 and RCE1.
messages: No accumulation in response to auxin treatment.
messages: Nucleus
messages: The formation of the adenylate intermediate is possible in absence of AXR1 and without the participation of Cys-215.

3702:AT2G40140
gene id: 3702:AT2G40140
uniprot id: Q9XEE6
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By salt stress.
messages: Expressed in roots and anthers.
messages: Involved in salt stress response. May positively modulate plant tolerance to salt stress.
messages: Nucleus

3702:AT2G16225
gene id: 3702:AT2G16225
uniprot id: A0A654ETA3
uniprot id: A8MQP7
names: Similarity
names: Tissue Specificity
messages: Belongs to the MEG family.
messages: Expressed in leaves and flowers.

3702:AT4G16680
gene id: 3702:AT4G16680
uniprot id: F4JMJ3
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. PRP2 sub-subfamily.
messages: May be involved in pre-mRNA splicing.
messages: Predominantly expressed in flowers.

3702:AT5G17600
gene id: 3702:AT5G17600
uniprot id: Q9LF64
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Expressed in flowers.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT2G22260
gene id: 3702:AT2G22260
uniprot id: Q9SIE0
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the alkB family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Dioxygenase that repairs alkylated DNA containing 1-methyladenine and 1-ethenoadenine by oxidative demethylation. Accepts double-stranded and single-stranded substrates, with a preference for dsDNA over ssDNA. Confers resistance to methylating agents such as methylmethanesulphonate (MMS).
messages: Enhanced sensitivity to the methylating agent methylmethanesulphonate (MMS) leading to abnormal seedlings in presence of MMS.
messages: Expressed ubiquitously, including in seedlings, leaves and flowers.
messages: In seedlings, mostly present in the shoot meristematic region, as well as in the vasculature of the hypocotyl and root. Expressed in both primary and lateral root vasculature. In flowers, accumulates in sepals, stem, carpel tissue and anther filaments.
messages: Nucleus

3702:AT4G38050
gene id: 3702:AT4G38050
uniprot id: A0A178V1D9
uniprot id: Q6SZ87
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Expressed in leaf primordia and vasculature of pedicels, rosette leaves, sepals, carpels and siliques. Expressed in the root central cylinder.
messages: Membrane

3702:AT1G62930
gene id: 3702:AT1G62930
uniprot id: Q9LQ14
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: chloroplast

3702:AT3G62840
gene id: 3702:AT3G62840
uniprot id: A0A384KAB2
uniprot id: A0A384LL34
uniprot id: O22247
uniprot id: Q8RUH0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP core protein family.
messages: Nucleus
messages: cytosol

3702:AT5G06520
gene id: 3702:AT5G06520
uniprot id: Q9FG18
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G23680
gene id: 3702:AT2G23680
uniprot id: A0A178VW81
uniprot id: O64834
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cold-regulated 413 protein family.
messages: Cell membrane
messages: Membrane

3702:AT5G24510
gene id: 3702:AT5G24510
uniprot id: A0A178U9K9
uniprot id: Q9FLV1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein P1/P2 family.
messages: P1 and P2 exist as dimers at the large ribosomal subunit.
messages: Plays an important role in the elongation step of protein synthesis.

3702:AT2G37360
gene id: 3702:AT2G37360
uniprot id: A0A178VW33
uniprot id: Q9ZUT0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane

3702:AT5G22840
gene id: 3702:AT5G22840
uniprot id: A0A178UED3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G22370
gene id: 3702:AT2G22370
uniprot id: A0A178VRQ8
uniprot id: Q9SJZ6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 18 family.
messages: Component of the Mediator complex (PubMed:17560376). Interacts with YY1 to suppress disease susceptibility via the repression of genes glutaredoxins GRX480, GRXS13 and thioredoxin TRX-h5. Binds to ABI4 to regulate abscisic acid responses; recruited by ABI4 to ABI5 promoter in the presence of abscisic acid (ABA). Interacts with SUF4 to regulate flowering time; recruited by SUF4 to FLC promoter (PubMed:24451981).
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors (PubMed:22021418, PubMed:24451981). Involved in the regulation of histone H3 lysine tri-methylation (H3K36me3). Associates with the promoter, coding and terminator regions of target genes suggesting its function in transcription initiation, elongation and termination. Multifunctional protein which regulates plant immunity, especially during necrotrophic fungal infection (e.g. B.cinerea and A.brassicicola), flowering time and responses to hormones (e.g. abscisic acid ABA and ethylene) through interactions with distinct transcription factors (PubMed:24451981).
messages: Deregulated expression of glutaredoxins GRX480, GRXS13 and thioredoxin TRX-h5 leading to enhanced susceptibility to fungal infection (e.g. B.cinerea and A.brassicicola). Altered RNA polymerase II occupancy and histone H3 lysine tri-methylation (H3K36me3) of target genes. Insensitivity to abscisic acid (ABA) and to the ethylene precursor 1-aminocyclopropane-1-carboxylic acid (ACC). Delayed flowering.
messages: Nucleus

3702:AT4G13250
gene id: 3702:AT4G13250
uniprot id: Q93ZA0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Decrease in chlorophyll b during dark incubation substantially suppressed.
messages: Interacts with NOL to form a complex that acts as a chlorophyll b reductase. Interacts with HCAR, RCCR, SGR1 and the LHCII complex. Part of a SGR1-CCE-LHCII complex, which acts in chlorophyll breakdown.
messages: Involved in chlorophyll b degradation. Belongs to the chlorophyll catabolic enzymes (CCEs).
messages: Up-regulated during senescence.
messages: chloroplast thylakoid membrane

3702:AT3G14450
gene id: 3702:AT3G14450
uniprot id: Q9LRR6
names: Domain
names: Subcellular Location Annotation
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Nucleus

3702:AT1G18630
gene id: 3702:AT1G18630
uniprot id: Q9FZ84
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GR-RBP family.
messages: Component of the mitochondrial ribosome small subunit.
messages: Down-regulated by salt stress.
messages: Mitochondrion
messages: Possibly has a role in RNA transcription or processing during stress.

3702:AT1G64900
gene id: 3702:AT1G64900
uniprot id: A0A5S9WS02
uniprot id: Q42602
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G01740
gene id: 3702:AT1G01740
uniprot id: A0A178WBE7
uniprot id: A0A178WDH9
uniprot id: A0A1P8AT62
uniprot id: A0A384K8P4
uniprot id: F4HU55
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with BRI1.
messages: Membrane
messages: Probable serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1. Functions redundantly with BSK3, BSK6, BSK7 and BSK8.
messages: Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G02010
gene id: 3702:AT5G02010
uniprot id: Q9LZN0
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: By auxin.
messages: Cell membrane
messages: Cytoplasm
messages: During embryogenesis, specifically expressed in the precursor cells of the quiescent center (QC) at the heart, torpedo, bent-cotyledon, and mature embryo stages. At the seedling stage, expressed in the QC and vascular bundles of root differentiated zones and lateral root primordia. Expressed in the vasculature of hypocotyls, and meristemoids and guard cells of cotyledons.
messages: Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP. In postembryonic roots, modulates root stem cell maintenance by regulating the expression of PLT1 and PLT2, which are key transcription factors that mediate the patterning of the root stem cell niche. May connect RopGEF-regulated Rac/Rop signaling and auxin-dependent PLT-regulated root pattern formation.
messages: Interacts with ARAC1/ROP3, PLT1 and PLT2.
messages: Plants silencing ROPGEF7 show defects in embryo patterning and maintenance of the quiescent center (QC), and postembryonic loss of root stem cell population.
messages: The PRONE (plant-specific Rop nucleotide exchanger) domain is responsible for the GEF activity.

3702:AT1G02000
gene id: 3702:AT1G02000
uniprot id: Q9LPC1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Golgi stack membrane
messages: Homodimer.
messages: In roots, leaves, siliques, flowers, pollen and stems.
messages: Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components.

3702:AT2G47870
gene id: 3702:AT2G47870
uniprot id: A0A178VSD2
uniprot id: O82254
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).

3702:AT2G42990
gene id: 3702:AT2G42990
uniprot id: A0A178VYD4
uniprot id: Q67ZI9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT1G55080
gene id: 3702:AT1G55080
uniprot id: Q8RWA2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant Mediator complex subunit 9 family.
messages: Component of the Mediator complex (PubMed:17560376). Interacts with MEE14/CBP1 (PubMed:26462908).
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors.
messages: Nucleus

3702:AT2G45670
gene id: 3702:AT2G45670
uniprot id: A0A178VT50
uniprot id: Q8S8S2
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
messages: Delayed senescence (PubMed:33809440). The double mutants lpeat1 and lpeat2 exhibit impaired growth, small leaves, short roots, reduced seed setting, reduced lipid content per fresh weight in roots and seeds, and large increases in lysophosphatidylethanolamine (LPE) and lysophosphatidylcholine (LPC) contents in leaves.
messages: Golgi apparatus membrane
messages: Late endosome membrane
messages: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.
messages: Possesses acyl-CoA-dependent lysophospholipid acyltransferase activity with a subset of lysophospholipids as substrates (PubMed:19445718, PubMed:28408542). Exhibits strong acylation activity on lysophosphatidylethanolamine (LPE), and lower activity on lysophosphatidylcholine (LPC) and lysophosphatidylserine (LPS) (PubMed:19445718). Exhibits acylation activity on both LPE and LPC (PubMed:28408542). Has a preference for 18:1-LPE over 16:0-LPE as acceptor (PubMed:19445718). Palmitoyl-CoA (16:0-CoA) is a better acyl donor than oleoyl-CoA (18:1-CoA) (PubMed:19445718, PubMed:28408542). Among several different acyl-CoA species the best acyl donor is eicosanoyl-CoA (20:0-CoA) (PubMed:28408542). Activity is calcium-independent (PubMed:19445718). Its activity is essential for maintaining adequate levels of phosphatidylethanolamine (PE), LPE and LPC in the cells, which is crucial for plant growth regulation (PubMed:28408542).
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphocholine.
messages: The ratio of isoform 2/isoform 1 mRNA is increased about 15-fold in the nonsense mRNA reducing factor mutant upf3-1.

3702:AT1G69818
gene id: 3702:AT1G69818
uniprot id: Q2V4D7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT2G39630
gene id: 3702:AT2G39630
uniprot id: A0A178VSH0
uniprot id: Q9SLN0
names: Similarity
messages: Belongs to the glycosyltransferase 2 family.

3702:AT3G53530
gene id: 3702:AT3G53530
uniprot id: A0A178VH96
uniprot id: Q8RXH8
names: Caution
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Heavy metal-associated protein involved in salt tolerance.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by salt and osmotic stress.

3702:AT5G64760
gene id: 3702:AT5G64760
uniprot id: A0A1P8BHB1
uniprot id: F4KF39
uniprot id: Q8VWK0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins (By similarity). Acts redundantly with RPN5A.
messages: Belongs to the proteasome subunit p55 family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: No visible phenotype.
messages: Nucleus
messages: Ubiquitous with highest expression in flowers.

3702:AT5G57560
gene id: 3702:AT5G57560
uniprot id: A0A178UQX4
uniprot id: Q38857
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Its induction in case of mechanical stress, suggests that it may contribute in the adaptive changes in morphogenesis by being recruited to alter tissues tensil strength, or flexibility, enabling adaptation to mechanically stressful environments.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Highly expressed. Predominantly expressed in green siliques. Expressed in young expanding leaves, trichomes, lateral root primordia, vascular tissue, abscission zones and elongating hypocols. Following wind stimulation, it decreases in the leaves of wind-stimulated plants, while it strongly increases in sites around cells of the pith parenchyma, between the vascular elements, and within the epidermis.
messages: In response to mechanical perturbations such as wind or touch. Induced by auxin and brassinolide.
messages: N-glycosylated; essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT4G21390
gene id: 3702:AT4G21390
uniprot id: A0A178USE7
uniprot id: A0A1P8B5P5
uniprot id: O81906
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT2G39350
gene id: 3702:AT2G39350
uniprot id: A0A5S9X5D2
uniprot id: O80946
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane

3702:AT2G22807
gene id: 3702:AT2G22807
uniprot id: Q2V467
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G09570
gene id: 3702:AT4G09570
uniprot id: Q38869
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Cytoplasm
messages: Interacts with Di19.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger. Functions as regulator of the calcium-mediated abscisic acid (ABA) signaling pathway. Phosphorylates ABA-responsive transcription factors ABF1 and ABF4 in vitro. Phosphorylates the nuclear zinc finger Di19 in vitro.
messages: Mutant cpk4-1 shows reduced ABA and salt responsiveness in seed germination.
messages: Nucleus
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (289-319) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT1G73000
gene id: 3702:AT1G73000
uniprot id: A0A178W862
uniprot id: Q9SSM7
names: Domain
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Homodimer and monomer (PubMed:21658606). Binds ABA on one subunit only. ABA-binding favors monomer and trans-homodimer intermediate, and increases PP2C inhibitor activity (PubMed:22579247, PubMed:23844015). Binds both (-)-ABA and (+)-ABA (PubMed:23844015). Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Interacts with HAB1, ABI1 and ABI2, and possibly with other PP2Cs (PubMed:19407142, PubMed:19898420, PubMed:22579247, PubMed:23844015).
messages: Membrane
messages: Nucleus
messages: Probable cloning artifact.
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA (PubMed:22579247, PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015).
messages: The synthetic growth inhibitor pyrabactin inhibits ABA-binding and subsequent PP2Cs inhibitor properties.
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT2G40320
gene id: 3702:AT2G40320
uniprot id: A0A178VXJ7
uniprot id: F4IH21
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Expressed in inflorescence stems undergoing secondary wall deposition.
messages: Golgi apparatus membrane
messages: Probable xylan acetyltransferase that plays a role in xylan acetylation and normal deposition of secondary cell walls (PubMed:26745802). Required for 2-O-monoacetylation, 3-O-monoacetylation and 2,3-O-diacetylation of xylosyl residues in xylan (PubMed:26745802). Required for the formation of 3-O-acetylated, 2-O-glucoronic acid-substituted xylosyl residues (PubMed:26745802). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G72125
gene id: 3702:AT1G72125
uniprot id: Q0WSZ6
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Chimeric cDNA. Its 3'- and 5'-sequences are derived from the gene At4g26240.
messages: Expressed in roots, flowers and siliques. Detected in stems and leaves.
messages: Membrane

3702:AT1G10170
gene id: 3702:AT1G10170
uniprot id: A0A178WL38
uniprot id: A0A1P8AVY4
uniprot id: A0A1P8AVZ2
uniprot id: Q9SY59
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NFX1 family.
messages: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON).
messages: Expressed in seedlings, roots, stems, leaves, buds, flowers and siliques.
messages: Impaired growth and survival under salt stress. Reduced H(2)O(2) production. Hypersensitivity to T-2 toxin and DAS (but not to DON), accompanied by enhanced SA accumulation and several plant defense gene induction. Less susceptible to Pst DC3000.
messages: Mediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi).
messages: Nucleus
messages: The RING-type zinc finger domain interacts with an ubiquitin-conjugating enzyme (E2) and facilitates ubiquitination.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G30710
gene id: 3702:AT1G30710
uniprot id: A0A5S9WHN6
uniprot id: Q9SA86
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in cell walls of etiolated hypocotyls.
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT4G24630
gene id: 3702:AT4G24630
uniprot id: A0A178UXE5
uniprot id: Q9SB58
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cell membrane
messages: Expressed in flowers and pollen.
messages: Membrane
messages: S-acyltransferase involved in protein lipid modification.
messages: The DHHC domain is required for palmitoyltransferase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G18020
gene id: 3702:AT5G18020
uniprot id: A0A178UJW5
uniprot id: Q9FJG0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: Functions as positive effectors of cell expansion through modulation of auxin transport.
messages: Strongly induced by auxin.

3702:AT1G31420
gene id: 3702:AT1G31420
uniprot id: C0LGF4
uniprot id: F4I9D5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Fei' means fat in Chinese.
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in the root meristem and elongation zone, and in hypocotyls of etiolated seedlings.
messages: Interacts with the ACC synthases ACS5 and ACS9 but not ACS2, via the kinase domain.
messages: Involved in the signaling pathway that regulates cell wall function, including cellulose biosynthesis, likely via an 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated signal (a precursor of ethylene).
messages: No visible phenotype. Fei1 and fei2 double mutants exhibit disrupted anisotropic expansion (e.g. during hypocotyl elongation), impaired synthesis of cell wall polymers, and abnormal cellulose biosynthesis.

3702:AT4G09610
gene id: 3702:AT4G09610
uniprot id: A0A178V0X0
uniprot id: P46688
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GASA family.
messages: Dry seeds and maturating siliques.
messages: Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.
messages: Secreted
messages: Six disulfide bonds may be present.

3702:AT2G28470
gene id: 3702:AT2G28470
uniprot id: A0A1P8AZB4
uniprot id: F4IIQ3
uniprot id: Q9SCV4
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Expressed in roots, flowers and siliques.
messages: apoplast

3702:AT5G27765
gene id: 3702:AT5G27765
uniprot id: A0A1P8BD36
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
messages: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation.
messages: Cell membrane
messages: Interacts with MIK2 (via extracellular leucine-rich repeat domain); this interaction triggers the formation of complex between MIK2 and the BAK1/SERK3 and SERK4 coreceptors, and subsequent BAK1 activation by phosphorylation.
messages: apoplast

3702:AT2G31725
gene id: 3702:AT2G31725
uniprot id: A0A178VXQ0
uniprot id: Q8RV68
names: Similarity
messages: Belongs to the FAM136 family.

3702:AT5G42800
gene id: 3702:AT5G42800
uniprot id: P51102
names: Function
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.
messages: Bifunctional enzyme involved in flavonoid metabolism.

3702:AT3G11030
gene id: 3702:AT3G11030
uniprot id: A0A178VBD7
uniprot id: Q9SRL3
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Golgi apparatus membrane
messages: Probable xylan acetyltransferase that plays a role in xylan acetylation and normal deposition of secondary cell walls (PubMed:26745802). Required for 2-O-monoacetylation, 3-O-monoacetylation and 2,3-O-diacetylation of xylosyl residues in xylan (PubMed:26745802). Required for the formation of 3-O-acetylated, 2-O-glucoronic acid-substituted xylosyl residues (PubMed:26745802). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity).

3702:AT5G25400
gene id: 3702:AT5G25400
uniprot id: A0A1W6AJZ8
uniprot id: Q3E6T0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT1G23420
gene id: 3702:AT1G23420
uniprot id: A0A1P8APE2
uniprot id: A0A654ECK4
uniprot id: Q1PFT2
uniprot id: Q9LDT3
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autoinduction down-regulated by SUP in adaxial region of the ovule outer integument. Negatively and spatially regulated by HLL, ANT, BELL1, NZZ/SPL and SUP.
messages: Belongs to the YABBY family.
messages: Essential for the formation and the abaxial-adaxial asymmetric growth of the ovule outer integument.
messages: First detected in a group of around 15 epidermal cells on the abaxial half of each ovule primordium (chalaza, outer integument initiation sites). Later present in the outer cell layer of the outer integument on the abaxial side of the ovule primordium. Confined to the chalazal end of the integument and disappears after anthesis. Also present in embryos at the globular stage.
messages: Interacts with SPL/NZZ.
messages: Nucleus

3702:AT1G57990
gene id: 3702:AT1G57990
uniprot id: A0A178WC51
uniprot id: Q9C508
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT1G29710
gene id: 3702:AT1G29710
uniprot id: Q9C6G2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Mitochondrion

3702:AT1G51355
gene id: 3702:AT1G51355
uniprot id: Q3ECS5
names: Function
messages: Probable cyclin-dependent protein kinase (CDK) inhibitor that functions as a repressor of mitosis in the endoreduplication cell cycle.

3702:AT2G47300
gene id: 3702:AT2G47300
uniprot id: F4IL30
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Accumulation of unprocessed cytosolic rRNA precursors, especially the large 35S rRNA precursor, as well as of the internal transcribed spacer 1 (ITS1) fragment corresponding to the region between the 18S and 5.8S rRNAs that contains the A3 cleavage sites.
messages: Component of nuclear RNase P and RNase MRP ribonucleoproteins (PubMed:22641852). RNase P consists of a catalytic RNA moiety and different protein chains (By similarity). Several subunits of RNase P are also part of the RNase MRP complex (By similarity). RNase MRP consists of a catalytic RNA moiety and several protein subunits (By similarity).
messages: Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends (PubMed:22641852). Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences (PubMed:22549728). Required for rRNA maturation, including 5.8S rRNA processing (PubMed:22549728).
messages: Nucleus
messages: nucleolus

3702:AT5G45390
gene id: 3702:AT5G45390
uniprot id: A0A654G8S4
uniprot id: Q94B60
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Essential protein required for chloroplast development and integrity (PubMed:16705403, PubMed:17241447). Essential for Embryogenesis (PubMed:23548781).
messages: Component of the chloroplastic Clp protease core complex which consist of at least 16 proteins: CLPP4 (3 copies), CLPP5 (3 copies), CLPR4 (2 copies), ClpP1 (1 copy), CLPP6 (1 copy), CLPR2 (1 copy), CLPT1 (1 copy), CLPT2 (1 copy) and 3 copies of CLPP3 and/or CLPR1 and/or CLPR3 (PubMed:11278690, PubMed:14593120, PubMed:16766689, PubMed:16980539). Interacts with CHIP (PubMed:17241447). The core complex is organized in two heptameric rings, one containing CLPP3,4,5,6 in a 1:2:3:1 ratio and the other CLPP1 and CLPR1,2,3,4 in a 3:1:1:1:1 ratio (PubMed:21712416).
messages: Embryo lethal when homozygous.
messages: Mostly expressed in leaves. Also detected in stems, and to a lower extent, in roots (at protein level).
messages: Repressed in darkness. Levels decrease in leaves during aging (at protein level). Slightly and transiently repressed by high light stress (at protein level).
messages: Ubiquitinated by CHIP.
messages: chloroplast stroma

3702:AT1G65740
gene id: 3702:AT1G65740
uniprot id: A0A178WKU7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G09405
gene id: 3702:AT3G09405
uniprot id: A0A1I9LNG0
uniprot id: Q9SR23
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pectinacetylesterase family.
messages: Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties.
messages: cell wall

3702:AT2G04630
gene id: 3702:AT2G04630
uniprot id: A0A5S9WX44
uniprot id: Q9SJ96
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal Rpo6/eukaryotic RPB6 RNA polymerase subunit family.
messages: Component of the RNA polymerase II and V complexes.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerase V which mediates RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements.
messages: Nucleus

3702:AT1G80640
gene id: 3702:AT1G80640
uniprot id: Q0V7T5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G21530
gene id: 3702:AT1G21530
uniprot id: Q9LPK7
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Expressed at low levels in roots.
messages: May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.

3702:AT1G72520
gene id: 3702:AT1G72520
uniprot id: Q9FNX8
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the lipoxygenase family.
messages: Binds 1 Fe cation per subunit.
messages: Expressed in leaves.
messages: Expression is greatly increased in leaves during leaf senescence.
messages: Induced by bacterial pathogens (e.g. Pseudomonas syringae pv. tomato), ozone O(3), and wounding.
messages: Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). 13S-lipoxygenase that can use linolenic acid as substrates.
messages: chloroplast

3702:AT1G45160
gene id: 3702:AT1G45160
uniprot id: F4HPN2
names: Similarity
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.

3702:AT2G26350
gene id: 3702:AT2G26350
uniprot id: A0A178VWJ2
uniprot id: A0A1P8AY59
uniprot id: A0A1P8AYA6
uniprot id: A0A1P8AYB2
uniprot id: A0A384L7H9
uniprot id: Q9SYU4
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the pex2/pex10/pex12 family.
messages: Component of the PEX2-PEX10-PEX12 retrotranslocation channel (By similarity). Interacts (via C-terminus) with PEX19-1.
messages: E3 ubiquitin-protein ligase component of a retrotranslocation channel required for peroxisome organization by mediating export of the PEX5 receptor from peroxisomes to the cytosol, thereby promoting PEX5 recycling (PubMed:12883010, PubMed:14576288, PubMed:17215364, PubMed:17478547, PubMed:20679226, PubMed:23336935, PubMed:25214533). The retrotranslocation channel is composed of PEX2, PEX10 and PEX12; each subunit contributing transmembrane segments that coassemble into an open channel that specifically allows the passage of PEX5 through the peroxisomal membrane (By similarity). PEX10 also regulates PEX5 recycling by acting as a E3 ubiquitin-protein ligase (PubMed:23336935, PubMed:25214533). When PEX5 recycling is compromised, PEX10 catalyzes polyubiquitination of PEX5 during its passage through the retrotranslocation channel, leading to its degradation (By similarity).
messages: Embryo lethality at the heart stage.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Increased expression in early post-germinative growth.
messages: Membrane
messages: Peroxisome membrane
messages: The E3 ubiquitin-protein ligase activity is stimulated by PEX12.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by hydrogen peroxide.

3702:AT4G15940
gene id: 3702:AT4G15940
uniprot id: Q93ZE5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAH family.
messages: Mitochondrion
messages: Probable acylpyruvase. Binds copper in vitro.

3702:AT3G20300
gene id: 3702:AT3G20300
uniprot id: A0A384KZJ8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G19440
gene id: 3702:AT3G19440
uniprot id: Q9LT72
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pseudouridine synthase RluA family.
messages: Mitochondrion

3702:AT3G04400
gene id: 3702:AT3G04400
uniprot id: A0A178VEM4
uniprot id: A0A384L7B8
uniprot id: F4J3P1
uniprot id: P49690
names: Similarity
messages: Belongs to the universal ribosomal protein uL14 family.

3702:AT4G40090
gene id: 3702:AT4G40090
uniprot id: A0A178USX4
uniprot id: Q9ZT17
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: Expressed at a low level in roots.
messages: Membrane
messages: O-glycosylated on the hydroxyproline residues.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT3G28200
gene id: 3702:AT3G28200
uniprot id: Q9LHA7
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT2G40480
gene id: 3702:AT2G40480
uniprot id: Q5XVC7
names: Similarity
messages: Belongs to the WEB family.

3702:AT1G17650
gene id: 3702:AT1G17650
uniprot id: F4I907
names: Activity Regulation
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Although GLYR2 acts as an aldo/keto reductase, it has no significant homology with either mammalian and bacterial NADPH-dependent SSA reductases.
messages: Belongs to the HIBADH-related family. NP60 subfamily.
messages: By cold and heat stresses. Down-regulated by ozone.
messages: Catalyzes the NADPH-dependent reduction of glyoxylate to glycolate as well as succinic semialdehyde (SSA) to gamma-hydroxybutyrate in vitro. May function in redox homeostasis and play a role in oxidative stress tolerance by detoxifying glyoxylate and SSA generated in glycolate metabolism and GABA metabolism, respectively.
messages: The ratio of NADPH/NADP(+) may regulate enzymatic activity.
messages: chloroplast stroma

3702:AT5G59700
gene id: 3702:AT5G59700
uniprot id: Q9FN92
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT4G17800
gene id: 3702:AT4G17800
uniprot id: O23620
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:ArthCp074
gene id: 3702:ArthCp074
uniprot id: P26288
names: Caution
names: RNA Editing
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: The initiator methionine is created by RNA editing.
messages: Was originally thought to originate from Synechocystis PCC6803.
messages: chloroplast thylakoid membrane

3702:AT3G15352
gene id: 3702:AT3G15352
uniprot id: A0A178V986
uniprot id: A0A1I9LSX1
uniprot id: A0A1I9LSX2
uniprot id: A0A1I9LSX3
uniprot id: Q9LJQ9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COX17 family.
messages: By copper, salicylic acid (SA), nitric oxide (NO) and infection with P.syringae pv. tomato.
messages: Copper chaperone for cytochrome c oxidase (COX). Binds 2 copper ions and delivers them to the Cu(A) site of COX (By similarity). Can complement the yeast mutant cox17.
messages: Mitochondrion intermembrane space

3702:AT3G62740
gene id: 3702:AT3G62740
uniprot id: A0A1I9LRH0
uniprot id: Q9LZJ1
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT1G57660
gene id: 3702:AT1G57660
uniprot id: A0A384L8G9
uniprot id: Q0WSS0
uniprot id: Q9FDZ9
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL21 family.

3702:AT1G74780
gene id: 3702:AT1G74780
uniprot id: A0A5S9WUE9
uniprot id: Q9SSG2
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G21065
gene id: 3702:AT4G21065
uniprot id: A0A178V0U2
uniprot id: A8MQA3
names: Caution
names: Sequence Caution
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G01170
gene id: 3702:AT2G01170
uniprot id: A0A5S9WW82
uniprot id: Q5FV40
uniprot id: Q9ZU50
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid/choline transporter (ACT) (TC 2.A.3.4) family.
messages: Expressed in roots, rosette leaves, stems, cauline leaves, flowers and siliques.
messages: May play a role in primary carbon metabolism and plant growth, by mediating the transport of GABA from the cytosol to mitochondria. When expressed in a heterologous system (yeast), imports Arg and Ala across the plasma membrane and exports Lys and Glu, but does not transport proline.
messages: Membrane
messages: Mitochondrion membrane
messages: No visible phenotype under normal growth conditions, but mutant plants grown on medium without sucrose show strong decrease in root growth and plants grown on soil under low light intensity have reduced rosette leaf expansion.

3702:AT2G23810
gene id: 3702:AT2G23810
uniprot id: A0A178VYI5
uniprot id: Q8S8Q6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tetraspanin (TM4SF) family.
messages: May be involved in the regulation of cell differentiation.
messages: Membrane

3702:AT3G48380
gene id: 3702:AT3G48380
uniprot id: Q9STL8
names: Function
names: Similarity
messages: Belongs to the peptidase C78 family.
messages: Thiol protease which recognizes and hydrolyzes the peptide bond at the C-terminal Gly of UFM1, a ubiquitin-like modifier protein bound to a number of target proteins.

3702:AT1G32470
gene id: 3702:AT1G32470
uniprot id: A0A178WBY7
uniprot id: Q9LQL0
names: Activity Regulation
names: Caution
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Inhibited by harpin, S-nitrosoglutathione (GSNO), nitric oxide, N-ethylmaleimide and 5,5'-dithiobis-(2-nitrobenzoic acid).
messages: Mitochondrion
messages: S-nitrosylated and/or glutathionylated at unknown positions in response to nitric oxide.
messages: The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.
messages: The glycine decarboxylase (GDC) or glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (By similarity).
messages: Was wrongly referred as Gly dehydrogenase subunit P2 in PubMed:20089767.

3702:AT5G05540
gene id: 3702:AT5G05540
uniprot id: A0A5S9Y1N7
uniprot id: Q9FFG1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-5' exonuclease degrading single-stranded small RNAs.
messages: Belongs to the REXO1/REXO3 family.
messages: No visible phenotype; due to the redundancy with other SDN ribonucleases. Simultaneous knockdown of SDN1, SDN2 and SDN3 results in elevated miRNA levels and pleiotropic developmental defects.
messages: Nucleus

3702:AT1G07110
gene id: 3702:AT1G07110
uniprot id: Q9MB58
names: Activity Regulation
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 6-phosphofructo-2-kinase activity is activated by pyruvate. 6-phosphofructo-2-kinase activity is inhibited by PPi, phosphoenolpyruvate and 2-phosphoglycerate. Fructose-2,6-bisphosphatase activity is inhibited by pyruvate, fructose 1,6-bisphosphate and 6-phosphogluconate.
messages: Cytoplasm
messages: In the C-terminal section; belongs to the phosphoglycerate mutase family.
messages: Interacts with 14-3-3 proteins; these interactions may regulate both nitrate assimilation and sucrose/starch partitioning in leaves during the diurnal cycle.
messages: Membrane
messages: Phosphorylation at Ser-220 and Ser-303 by CPK3 promotes 14-3-3 proteins binding.
messages: Synthesis and degradation of fructose 2,6-bisphosphate. Regulates carbon partitioning between sucrose versus starch during the diurnal cycle.

3702:AT2G18080
gene id: 3702:AT2G18080
uniprot id: Q1PF50
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S28 family.
messages: May be involved in a proteolytic pathway controlling the nuclear division phase of megagametogenesis.
messages: No visible phenotype.
messages: Secreted

3702:AT3G02600
gene id: 3702:AT3G02600
uniprot id: A0A384LE78
uniprot id: A0A5S9X8H7
uniprot id: F4IX65
uniprot id: Q8LFD1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PA-phosphatase related phosphoesterase family.
messages: Membrane
messages: chloroplast membrane

3702:AT2G43550
gene id: 3702:AT2G43550
uniprot id: O22869
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family. Protease inhibitor I18 (RTI/MTI-2) subfamily.
messages: Secreted
messages: Was initially thought to be a protease inhibitor.

3702:AT2G23400
gene id: 3702:AT2G23400
uniprot id: A0A1P8AZB2
uniprot id: F4IMI8
names: Function
names: Similarity
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.

3702:AT5G16715
gene id: 3702:AT5G16715
uniprot id: F4KE63
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Embryo defective. Developmental arrest of the embryo at the globular stage.
messages: Mitochondrion
messages: chloroplast

3702:AT2G23540
gene id: 3702:AT2G23540
uniprot id: A0A178VNJ6
uniprot id: O80470
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G29050
gene id: 3702:AT2G29050
uniprot id: A0A654EYK0
uniprot id: Q0WQX7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S54 family.
messages: Expressed in roots, seedlings, leaves, stems and flowers.
messages: Golgi apparatus membrane
messages: Membrane
messages: No visible phenotype.
messages: Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis. Unable to cleave the Drosophila protein Spitz.

3702:AT1G54960
gene id: 3702:AT1G54960
uniprot id: Q9FZ36
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
messages: Expressed in roots and flowers.
messages: Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.
messages: cytoskeleton

3702:AT2G20160
gene id: 3702:AT2G20160
uniprot id: A0A5S9WZG9
uniprot id: Q9SL65
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity). Probably implicated in incompatibility response after hybridization.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.
messages: Mainly detected in the siliques.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with CPR1/CPR30.
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.
messages: Repressed by MEA and the polycomb repressive complex (PRC).
messages: This protein was called 'Meidos' in memory of one of the murdered sons of the mythological 'Medea', as MEIDOS is repressed by MEDEA.

3702:AT5G55200
gene id: 3702:AT5G55200
uniprot id: A0A7G2FGD8
uniprot id: Q9FLP3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GrpE family.
messages: By UV-B.
messages: Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (By similarity). Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins (By similarity). Binds ATP (PubMed:17137349). Interacts with copper ions Cu(2+) (PubMed:20018591).
messages: Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.
messages: Mitochondrion matrix
messages: Probable component of the PAM complex, at least composed of SSC1 (mtHsp70), MGE1, TIM44, PAM16/TIM16, PAM17 and PAM18/TIM14. Interacts with SSQ1.

3702:AT3G43190
gene id: 3702:AT3G43190
uniprot id: Q9LXL5
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.
messages: By anaerobic stress. By hypoxia in the roots (at protein level). Up-regulated by NUC/IDD8.
messages: Detected in the whole plant with highest expression in young rosette leaves and roots.
messages: No visible phenotype.
messages: Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.

3702:AT5G49710
gene id: 3702:AT5G49710
uniprot id: A0A178UBR0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G26510
gene id: 3702:AT4G26510
uniprot id: A0A178UWP6
uniprot id: O65583
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
messages: Allosterically activated by GTP.
messages: Belongs to the uridine kinase family.
messages: Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.
messages: In the C-terminal section; belongs to the UPRTase family.
messages: In the N-terminal section; belongs to the uridine kinase family.
messages: Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure.

3702:AT2G47170
gene id: 3702:AT2G47170
uniprot id: A0A178VXE5
uniprot id: P36397
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by AGD7 and AGD10.
messages: Belongs to the small GTPase superfamily. Arf family.
messages: Early endosome
messages: Endosome
messages: GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.
messages: GTP-binding protein involved in protein trafficking; required for the sequence-specific vacuolar sorting route to the lytic vacuole, for the ER-to-Golgi transport and for the Golgi-derived transport to the plasma membrane (PubMed:24369434). Involved in the recruitment of COPI and GDAP1 to membranes. Required for recycling of PIN auxin transporters (e.g. PIN1 and PIN2) in a fungal toxin brefeldin A (BFA)-dependent manner. Involved in various auxin-dependent developmental processes (PubMed:24369434).
messages: Golgi apparatus
messages: Interacts with AGD7 and GDAP1. GDP-locked form interacts with cytosolic tail of p24 proteins. Interacts with AGD5 at trans-Golgi network (PubMed:21105926). Interacts with A.tumefaciens AK6b (PubMed:21156810).
messages: trans-Golgi network

3702:AT4G31120
gene id: 3702:AT4G31120
uniprot id: Q8GWT4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
messages: Circadian-regulation.
messages: Cytoplasm
messages: High levels from 5 to 20 days after germination (at protein level).
messages: Highly expressed in flowers, roots and siliques, lower expression in stems and mature leaves (at protein level). Abundant in shoot apex, young leaves and leaf primordia, floral and inflorescence meristems, gynoecium, stamens, sepals and young siliques, but not in older leaves, petals and vascular tissues.
messages: Methylates arginine residues of myelin basic protein (MBP) in vitro. Methylates symmetrically histone H4 of the FLC chromatin to form H4R3me2s, which in turn suppresses FLC expression to induce flowering. Regulates alternative splicing by methylating spliceosomal proteins. Involved in the post-transcriptional regulation of the circadian clock.
messages: Plants are late-flowering. Increased alternative splicing of several genes, including APRR9.

3702:AT5G11320
gene id: 3702:AT5G11320
uniprot id: Q9LFM5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FMO family.
messages: Cytoplasm
messages: Endoplasmic reticulum membrane
messages: Expressed in leaves, stems, flowers, buds and siliques. Detected in the apical gynoecium and in the developing ovules.
messages: Expression relatively broad during early stages of embryogenesis and more restricted to apical region of the cotyledons in the mature embryo.
messages: Involved in auxin biosynthesis. Both isoforms are catalitically active. Involved during embryogenesis and seedling development. Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots.
messages: May be due to an intron retention. Expressed only in flowers. Contains a transmembrane at positions 334 - 354.
messages: No visible phenotype, due to the redundancy with the other members of the YUCCA family.
messages: Positively regulated by LEC2, by NGA3 and by STY1.

3702:AT3G03860
gene id: 3702:AT3G03860
uniprot id: Q93YX4
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G20990
gene id: 3702:AT4G20990
uniprot id: A0A654FRB4
uniprot id: F4JIK2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: N-glycosylated.
messages: Reversible hydration of carbon dioxide.
messages: chloroplast stroma

3702:AT5G02220
gene id: 3702:AT5G02220
uniprot id: Q1JPP8
names: Function
names: Induction
names: Subunit
names: Tissue Specificity
messages: Expressed in root meristems after induction.
messages: Interacts with CDKA-1 and D-type cyclins (PubMed:20706207).
messages: Probable cyclin-dependent protein kinase (CDK) inhibitor that functions as a repressor of mitosis in the endoreduplication cell cycle (PubMed:26546445). Acts as a potent cell cycle inhibitor (PubMed:24399300).
messages: Up-regulated by double-stranded DNA breaks-inducing treatments (PubMed:17227549). Up-regulated by DNA damage (PubMed:24399300).

3702:AT4G02980
gene id: 3702:AT4G02980
uniprot id: A0A654FLD0
uniprot id: P33487
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Analysis of new null mutants leads to the conclusion that plants do not need ABP1 for auxin signaling and for their growth and development under normal growth conditions.
messages: Auxin receptor that controls cell elongation and cell division (PubMed:9804548, PubMed:11297513). Involved in embryonic morphogenesis (PubMed:11297513). Acts on the cell cycle, endocycle, cell plate formation, and cell expansion and contributes to the control of auxin-related gene expression (PubMed:18952781). Controls root meristem size and mediates auxin responsiveness (PubMed:19777056). Involved in activation of ROP GTPases in response to auxin and regulation of clathrin-mediated endocytosis in roots (PubMed:20887895, PubMed:22683261). Acts as a positive factor in clathrin recruitment to the plasma membrane, thereby promoting endocytosis (PubMed:20887896, PubMed:25922490). Upon auxin binding, restricts the internalization of PIN proteins by inhibiting clathrin-mediated endocytosis (PubMed:20887896, PubMed:25922490). Involved in the regulation of polar auxin transport (PubMed:21223392). Behaves as a negative regulator of the SCF(TIR1/AFB) signaling pathway, protecting AUX/IAA repressors from degradation (PubMed:24051655). Regulates the expression of cell wall remodeling genes via an SCF(TIR1/AFB)-dependent pathway (PubMed:24424095). Involved in the modulation of hemicellulose xyloglucan structure (PubMed:24424095). Required for rapid auxin-mediated re-orientation of microtubules to regulate cell elongation in roots and dark-grown hypocotyls as well as asymmetric growth during gravitropic responses (PubMed:25409144). Involved in the shade avoidance response (PubMed:24052532). Forms with TMK1 a cell surface auxin perception complex that activates ROP signaling pathways (PubMed:24578577). ABP1 sensing of auxin is important for the ABP1-TMK1 complex formation (PubMed:24578577). Interacts functionally with phytochrome to regulate growth (PubMed:25392478).
messages: Cell membrane
messages: Embryo lethality, when homozygous (PubMed:11297513). No visible phenotype was found for other null mutants (PubMed:25646447).
messages: Endoplasmic reticulum lumen
messages: Glycosylated.
messages: Homodimer (By similarity). May interact with the GPI-anchored plasma membrane protein SKU5 and its family members (PubMed:16649105). Interacts with TMK1 (via extracellular domain) (PubMed:24578577).
messages: Ubiquitinated by RMA2, leading to proteasomal degradation.
messages: Up-regulated by auxin.

3702:AT1G69828
gene id: 3702:AT1G69828
uniprot id: Q2V4D5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G52770
gene id: 3702:AT1G52770
uniprot id: Q9C941
names: Similarity
messages: Belongs to the NPH3 family.

3702:AT5G64750
gene id: 3702:AT5G64750
uniprot id: A0A178UFQ7
uniprot id: Q9FGF8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By abscisic acid (ABA) and stresses, including cold, drought and salt (PubMed:16227468, PubMed:26961720). Triggered by YY1 (PubMed:26961720).
messages: Negative regulator of the abscisic acid (ABA) signaling pathway involved in seed germination and in responses to stress conditions. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
messages: Nucleus
messages: Ubiquitous with lower levels in seeds and siliques.

3702:AT4G38710
gene id: 3702:AT4G38710
uniprot id: Q9SZP8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-4 subunit B family.
messages: Homodimer (By similarity). Nonspherical monomer. mRNA-discriminating component of initiation complexes (By similarity). Interacts with MAD2 (PubMed:20706207).
messages: Nucleus
messages: Phosphorylated.
messages: Promotes the eIF4F and eIF4A RNA-dependent ATP-hydrolysis activity with different efficiency depending on mRNAs, thus providing mRNA discrimination during initiation of translation.

3702:AT1G52710
gene id: 3702:AT1G52710
uniprot id: Q9SSS5
names: Similarity
messages: Belongs to the cytochrome c oxidase subunit 5B (TC 3.D.4.11) family.

3702:AT1G08360
gene id: 3702:AT1G08360
uniprot id: A0A178W6A5
uniprot id: Q8VZB9
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Interacts with the GTPase NUG2.

3702:AT5G06980
gene id: 3702:AT5G06980
uniprot id: Q9FL48
names: Disruption Phenotype
names: Function
names: Induction
names: Subunit
messages: Interacts with REV8.
messages: No effect on circadian clock.
messages: Probable transcriptional coactivator.
messages: Repressed by members of the TOC1/PRR1 family of clock genes.

3702:AT5G46570
gene id: 3702:AT5G46570
uniprot id: A0A654G8G5
uniprot id: Q9LS26
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with BRI1.
messages: Membrane
messages: Phosphorylated by BRI1 upon brassinolide (BL) treatment.
messages: Probable serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1. Mediates signal transduction from BRI1 by functioning as substrate of BRI1.
messages: Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.

3702:AT2G46270
gene id: 3702:AT2G46270
uniprot id: A0A5S9X7F5
uniprot id: F4II62
uniprot id: P42776
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
messages: DNA-binding heterodimer. Interacts with GBF4 (PubMed:8146148). Interacts with BZIP16 and BZIP68 (PubMed:18315949).
messages: Nucleus
messages: Present only in dark grown leaves and roots.

3702:AT5G09750
gene id: 3702:AT5G09750
uniprot id: Q9LXD8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the developing septum, transmitting tract and stigma.
messages: Gynoecium.
messages: Homodimer (Probable). Interacts with SPT.
messages: Impaired pollen tube growth.
messages: Negatively regulated by ARF3/ETT in the abaxial gynoecium.
messages: Nucleus
messages: Required for the female reproductive tract development and fertility.

3702:AT3G57340
gene id: 3702:AT3G57340
uniprot id: A0A384L618
uniprot id: Q9M2L3
names: Caution
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G20490
gene id: 3702:AT1G20490
uniprot id: Q3E6Y4
names: Domain
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Both substrate-binding domains (SBD1 and SBD2) are involved in the substrate recognition, and are sufficient to confer the substrate specificity.
messages: By wounding or by jasmonic acid (JA) treatment.
messages: Carboxylate--CoA ligase that may use 4-coumarate as substrate. Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioester.
messages: Peroxisome
messages: Sequencing errors.

3702:AT3G22990
gene id: 3702:AT3G22990
uniprot id: A0A654FB42
uniprot id: Q9LS90
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Developmental and morphological defects at the vegetative stage in cotyledons and true leaves, and during the reproductive phase in flowers and siliques. Increased abortive frequency of embryos.
messages: Expressed in roots, leaves, stems and flowers.
messages: Interacts with AS2.
messages: Involved in leaf and flower development (PubMed:18846319). Plays roles in leaf development partly by associating with AS2 and repressing KNAT1/BP transcription (PubMed:29775508). Required for the formation of anther cell layers and normal expression of genes that regulates anther development (PubMed:22461668).
messages: Nucleus

3702:AT3G08630
gene id: 3702:AT3G08630
uniprot id: A0A178V8Q9
uniprot id: Q9C9Z3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RETICULATA family.
messages: May play a role in leaf development.
messages: chloroplast membrane

3702:AT4G08800
gene id: 3702:AT4G08800
uniprot id: F4JID0
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT3G44250
gene id: 3702:AT3G44250
uniprot id: A0A654FDK3
uniprot id: Q9LXM3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G61790
gene id: 3702:AT1G61790
uniprot id: A0A654EKK4
uniprot id: Q9SYB5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OST3/OST6 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT5G53360
gene id: 3702:AT5G53360
uniprot id: A0A1P8BC00
uniprot id: A0A654GAH8
uniprot id: Q8S3N1
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SINA (Seven in absentia) family.
messages: By auxin (PubMed:12226665). Induced by salt stress (PubMed:24350984).
messages: Cytoplasm
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:12226665). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:12226665). Mediates the ubiquitination and proteasomal-dependent degradation of NAC021/NAC022, a transcription activator that functions downstream of the auxin signals, thereby acting as a down-regulator of auxin signals (PubMed:12226665). Involved in the formation of lateral roots (PubMed:12226665). Is antagonist to SINAT1, SINAT2, SINAT3 and SINAT4 by suppressing FREE1 ubiquitination and degradation mediated by SINAT1, SINAT2, SINAT3 and SINAT4, and promoting FREE1 accumulation (PubMed:32786047).
messages: Expressed at low level in the vascular tissue of mature roots. Expressed in lateral roots and in elongation zone of the main root upon stimulation by auxin. Colocalizes with NAC021/NAC022.
messages: Homodimer; homodimerization is essential for its function. Interacts with UBC28 and NAC021/NAC022 (PubMed:12226665). Interacts with SINAT6 (PubMed:24350984). Interacts with ATG6 and TRAF1A (PubMed:28351989). Interacts with WAV3 (PubMed:22122664). Interacts with FREE1 (PubMed:32786047).
messages: Nucleus
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT5G52980
gene id: 3702:AT5G52980
uniprot id: A0A1P8BD54
uniprot id: A0A654GAG5
uniprot id: Q9LVV4
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT2G36120
gene id: 3702:AT2G36120
uniprot id: Q9SIH2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Defects in venation pattern in leaves and cotyledons, post-genital organ fusions in all aerial organs from organ primordia to young expanding organs and glaucous and rough leaf surface.
messages: Expressed in emerging leaf primordia and young leaves.
messages: Involved in leaf vasculature patterning.
messages: Secreted

3702:AT5G19220
gene id: 3702:AT5G19220
uniprot id: P55229
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by 3'phosphoglycerate, inhibited by orthophosphate. Allosteric regulation.
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Heterotetramer.
messages: Leaves.
messages: This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
messages: chloroplast

3702:AT1G68220
gene id: 3702:AT1G68220
uniprot id: A0A178W4G9
uniprot id: Q9C9F7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Membrane

3702:AT5G19010
gene id: 3702:AT5G19010
uniprot id: A0A178U9S0
uniprot id: Q8W4J2
names: Activity Regulation
names: Domain
names: PTM
names: Similarity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-187 and Tyr-189, which activates the enzyme.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT5G47370
gene id: 3702:AT5G47370
uniprot id: A0A5S9YBV4
uniprot id: P46601
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: By indole-3-acetic acid (IAA).
messages: Interacts with RBR1.
messages: Nucleus
messages: Probable transcription factor that plays a role in auxin-mediated morphogenesis. Negatively regulates lateral root elongation.

3702:AT3G15990
gene id: 3702:AT3G15990
uniprot id: A0A654F7M5
uniprot id: Q9LW86
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
messages: Membrane

3702:AT3G20475
gene id: 3702:AT3G20475
uniprot id: F4JEP5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DNA mismatch repair MutS family.
messages: Chromosome
messages: Involved in meiotic recombination in association with MSH4. Required for reciprocal recombination and proper segregation of homologous chromosomes at meiosis. Promotes homologous recombination through facilitating chiasma formation during prophase I. Involved in the control of class I crossovers formation.
messages: Normal vegetative growth but severe reduction in fertility due to a decrease in chiasma frequency at metaphase I of meiosis.
messages: Nucleus
messages: Specifically expressed in flowers.

3702:AT1G75110
gene id: 3702:AT1G75110
uniprot id: A0A654EZT8
uniprot id: Q9C9Q5
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 77 family.
messages: Expressed in roots, rosette and cauline leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Plays a role in the arabinosylation of cell wall components (PubMed:17401635). Involved in the arabinosylation of extensin proteins in root hair cells. Extensins are structural glycoproteins present in cell walls and its arabinosylation is important for root hair cell development (PubMed:21680836).
messages: Reduced arabinose content in the insoluble cell wall fraction of meristematic region (PubMed:17401635). Reduced root hair length and content of arabinosylated extensins in root cell walls (PubMed:21680836).
messages: The conserved DXD motif is involved in enzyme activity.

3702:AT1G75420
gene id: 3702:AT1G75420
uniprot id: A0A384KQD5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G39240
gene id: 3702:AT2G39240
uniprot id: Q1PEV9
names: Similarity
messages: Belongs to the RRN3 family.

3702:AT1G67780
gene id: 3702:AT1G67780
uniprot id: A0A654EXN0
uniprot id: F4HTR3
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Nucleus

3702:AT5G28460
gene id: 3702:AT5G28460
uniprot id: Q9LKU8
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT4G35620
gene id: 3702:AT4G35620
uniprot id: A0A1P8B7U0
uniprot id: A0A654FVS9
uniprot id: Q39070
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Expressed in roots.
messages: Interacts with CDC20-1 and CDC20-2.

3702:AT1G24485
gene id: 3702:AT1G24485
uniprot id: A5PHT0
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G62020
gene id: 3702:AT5G62020
uniprot id: A0A384KDZ5
uniprot id: C0SVV5
uniprot id: Q9SCW4
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class B subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT2G37170
gene id: 3702:AT2G37170
uniprot id: A0A1P8AYA1
uniprot id: P43287
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.
messages: Cell membrane
messages: Membrane
messages: Predominantly expressed in the root, with a strong expression in the cortex, endodermis, and stele.
messages: Water channel required to facilitate the transport of water across cell membrane. Plays an predominant role in root water uptake process in conditions of reduced transpiration, and in osmotic fluid transport. Its function is impaired by Hg(2+). Inhibited by cytosolic acidosis which occurs during anoxia in roots.

3702:AT4G23300
gene id: 3702:AT4G23300
uniprot id: A0A5S9XVG7
uniprot id: Q6NQ87
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT4G39050
gene id: 3702:AT4G39050
uniprot id: A0A178UX09
uniprot id: Q8W5R5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
messages: Mitochondrion

3702:AT4G16820
gene id: 3702:AT4G16820
uniprot id: O23522
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acylhydrolase that catalyzes the hydrolysis of phosphatidylcholine at the sn-1 position. Has a strong galactolipase activity toward digalactosyldiacylglycerol (DGDG). Hydrolyzes triacylglycerol (TAG), but has a low activity toward phosphatidylcholine (PC) and monogalactosyldiacylglycerol (MGDG).
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: No visible phenotype under standard growth phenotype.
messages: Not induced by wounding.
messages: Ubiquitous. Highest expression in flowers and seedlings.
messages: chloroplast

3702:AT1G57860
gene id: 3702:AT1G57860
uniprot id: A0A384L8G9
uniprot id: Q0WSS0
uniprot id: Q9FDZ9
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL21 family.

3702:AT5G52830
gene id: 3702:AT5G52830
uniprot id: Q0WKX3
uniprot id: Q9FLX8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-e family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT2G16595
gene id: 3702:AT2G16595
uniprot id: A0A178VWV9
uniprot id: Q6AWS7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP-alpha family.
messages: Endoplasmic reticulum membrane
messages: Heterotetramer of TRAP-alpha, TRAP-beta, TRAP-delta and TRAP-gamma.
messages: Membrane
messages: Shows a remarkable charge distribution with the N-terminus being highly negatively charged, and the cytoplasmic C-terminus positively charged.
messages: TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. May be involved in the recycling of the translocation apparatus after completion of the translocation process or may function as a membrane-bound chaperone facilitating folding of translocated proteins.

3702:AT4G39800
gene id: 3702:AT4G39800
uniprot id: A0A384KJU9
uniprot id: C4PW05
uniprot id: P42801
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the myo-inositol 1-phosphate synthase family.
messages: Expressed in siliques, leaves, roots, seed endosperm, but not in embryos. Highest expression in leaves, but restricted to vascular tissue in older leaves.
messages: Homotrimer or homotetramer. Interacts with ATXR5 and ATXR6.
messages: Key enzyme in myo-inositol biosynthesis pathway that catalyzes the conversion of glucose 6-phosphate to 1-myo-inositol 1-phosphate in a NAD-dependent manner (PubMed:20215587). Catalyzes the majority of myo-inositol synthesis required for plant growth and development (PubMed:20215587). Acts as a repressor of programmed cell death and protects plant cells against cell death under high light intensity or long days (PubMed:20215587). Controls its own transcription by inhibiting ATXR6 activity (PubMed:23341037). Reduces the deposition of inhibitory histone marks on its own promoter (PubMed:23341037).
messages: Nucleus
messages: Shorter seedlings with deformed cotyledons and altered root cap organization. Spontaneous lesion formation on mature leaves when plants are transferred under long days. Enhanced basal resistance to pathogens and increased sensitivity to abscisic acid during seed germination and root growth.
messages: Up-regulated by the IPS1 protein itself. Down-regulate upon flagellin treatment.
messages: Was called MIPS2.
messages: cytosol

3702:AT2G03780
gene id: 3702:AT2G03780
uniprot id: A0A1P8AX63
uniprot id: A0A1P8AX91
uniprot id: A0A654ET18
uniprot id: Q8GZ75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the translin family.
messages: Nucleus

3702:AT1G63410
gene id: 3702:AT1G63410
uniprot id: A0A1P8ASH2
uniprot id: A0A5S9WNZ0
uniprot id: Q9SH27
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

3702:AT5G19740
gene id: 3702:AT5G19740
uniprot id: A0A654G314
uniprot id: Q7Y228
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts in association with AMP1 to suppress ectopic stem cell niche formation in the shoot apical meristem (SAM) independently of cytokinin signaling pathway.
messages: Belongs to the peptidase M28 family. M28B subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Endoplasmic reticulum membrane

3702:AT5G49900
gene id: 3702:AT5G49900
uniprot id: Q8GUI9
names: Function
names: Similarity
messages: Belongs to the non-lysosomal glucosylceramidase family.
messages: Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.

3702:AT2G43520
gene id: 3702:AT2G43520
uniprot id: A0A178W058
uniprot id: O22866
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family. Protease inhibitor I18 (RTI/MTI-2) subfamily.
messages: Secreted
messages: Was initially thought to be a protease inhibitor.

3702:AT4G38940
gene id: 3702:AT4G38940
uniprot id: Q9SVJ9
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1, SKP1B/ASK2, ASK11, ASK13 and ASK18.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT3G62790
gene id: 3702:AT3G62790
uniprot id: A0A178VCL7
uniprot id: Q9LZI6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFS5 subunit family.
messages: Complex I is composed of at least 49 different subunits. This is a component of the iron-sulfur (IP) fragment of the enzyme.
messages: Contains two C-X9-C motifs that are predicted to form a helix-coil-helix structure, permitting the formation of intramolecular disulfide bonds.
messages: Membrane
messages: Mitochondrion
messages: Mitochondrion inner membrane
messages: Mitochondrion intermembrane space

3702:AT2G36985
gene id: 3702:AT2G36985
uniprot id: A0A178VY26
uniprot id: Q7XXN8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in seedlings within 6 days after a shift from dark to light.
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Expressed in the shoot apex and young developing leaves (PubMed:15125775). In seedlings, present in the shoot apical meristem and throughout the lamina of young leaves primordia (PubMed:15125775). In cotyledons, stems and mature leaves, restricted to the vasculature (PubMed:15125775). Weakly expressed floral meristem primordia (PubMed:15125775). During flower development, first observed in the center of the floral meristem, in the L3 and underlying cells (PubMed:15125775). In floral buds, observed at low levels in the center of floral meristems and accumulates progressively in sepals, petals and in the center of developing stamens (PubMed:15125775). In mature flowers, confined to the vasculature of all floral organs (PubMed:15125775).
messages: Mostly expressed in stems, flower buds, flowers and seedling shoots, to a lesser extent, in roots and young cauline leaves, but not in mature rosette leaves (PubMed:15125775). Barely observed in cotyledons and leaf primordia (PubMed:15125775).
messages: No visible phenotype.
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs (e.g. leaves) and coordinating socket cell recruitment and differentiation at trichome sites (PubMed:15125775, PubMed:20826883, Ref.6, PubMed:25701405). Regulates the positional cue and cell proliferation along the body axis (PubMed:20826883).

3702:AT1G04850
gene id: 3702:AT1G04850
uniprot id: A0A178W2G7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G53480
gene id: 3702:AT5G53480
uniprot id: A0A178UKY5
uniprot id: Q9FJD4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as negative effector of drought tolerance. Involved in the regulation of stomatal closure and in the abscisic acid (ABA)-mediated pathway that lead to drought tolerance. Does not directly mediate nuclear import of ABI1 and ABI2 which are key regulators of the ABA signaling pathway. May be involved in nuclear translocation of other type 2C protein phosphatases that mediate ABA signaling.
messages: Belongs to the importin beta family. Importin beta-1 subfamily.
messages: Cytoplasm
messages: Delayed development and flowering, reduced length of leaves, stems and siliques, increased sensitivity to abscisic acid (ABA) and increased drought tolerance.
messages: Expressed in roots, cotyledons, leaves, stems, petals, stamen, stigma, siliques, embryos and guard cells.
messages: Forms a complex with the importin subunits alpha IMPA1 or IMPA2, the nucleoporin NUP62 and the Ran-GTP-binding proteins RAN1, RAN2 or RAN3.
messages: Nucleus

3702:AT3G18870
gene id: 3702:AT3G18870
uniprot id: Q9LHN2
names: Similarity
messages: Belongs to the mTERF family.

3702:AT4G15790
gene id: 3702:AT4G15790
uniprot id: A0A178UXU6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G25680
gene id: 3702:AT2G25680
uniprot id: Q9SL95
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 90% and 80% reduction in molybdate content in shoots and roots respectively. Reduced growth of roots and shoots under conditions of limited molybdate supply. 9-fold reduction in molybdate content in leaf vacuoles. Decreased nitrate reductase activity due to a reduced molybdate uptake.
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: Cell membrane
messages: Endomembrane system
messages: High affinity molybdate transporter. Unable to transport sulfate.
messages: Mitochondrion membrane
messages: Not inhibited by sulfate.
messages: Not regulated during leaf senescence.
messages: Strongly expressed in roots. Detected in the vascular tissues of hypocotyls, in petioles and vascular tissues of cotyledons and leaves, in mesophyll cells, stamen, sepals and siliques.
messages: The amino-acid substitution Asp-429 to Val observed in cv. Landsberg erecta may decrease the molybdate transport activity. A 54-bp deletion in the promoter of MOT1 is strongly associated with the decreased expression of the gene and the resulting low molybdate content observed in several cultivars.

3702:AT2G18380
gene id: 3702:AT2G18380
uniprot id: A0A178VWM7
uniprot id: Q9ZPX0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class B subfamily.
messages: Nucleus
messages: Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

3702:AT1G18980
gene id: 3702:AT1G18980
uniprot id: A0A384L6L3
uniprot id: Q29PR5
uniprot id: Q9LMC9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT5G44400
gene id: 3702:AT5G44400
uniprot id: A0A5S9YB41
uniprot id: Q9FKU8
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT3G27320
gene id: 3702:AT3G27320
uniprot id: A0A178VBQ9
uniprot id: A0A178VBR5
uniprot id: Q9LK21
names: Function
names: Sequence Caution
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Sequencing errors.

3702:AT1G02430
gene id: 3702:AT1G02430
uniprot id: A0A1P8ARH7
uniprot id: F4HXI4
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3702:AT1G09900
gene id: 3702:AT1G09900
uniprot id: Q3EDF8
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G43790
gene id: 3702:AT2G43790
uniprot id: A0A178VTX8
uniprot id: Q39026
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by threonine and tyrosine phosphorylation.
messages: Activated by threonine and tyrosine phosphorylation. Activated by the MAP kinase kinases MKK2, MKK3, MKK4, MKK5, MKK7 and MKK9. Activated in response to touch, wounding, low temperature, low humidity, salt stress, hydrogen peroxide, ozone, ACC (an ethylene precursor), jasmonic acid (JA), mastoparan and UVC. Activated in response to elicitors: oligogalacturonides, hexameric chitin fragments, fungal xylanase, and the bacterial flagellin and harpin. Activated upon Pseudomonas syringae pv. tomato DC3000 infection. Repressed by the protein phosphatase 2C AP2C1 and the protein-tyrosine-phosphatases MKP1 and PTP1. Repressed by DSPTP1B/MKP2-mediated dephosphorylation. Activated by polarized BASL (PubMed:27746029). Triggered by MKKK20 in response to various abiotic stresses, including osmotic stress, cold and reactive oxygen species (ROS) (PubMed:21969089). Activated by MKK5 in response to abscisic acid (ABA) (PubMed:27913741).
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: By Alternaria brassicae pathogen infection.
messages: Copolarizes with BASL, YDA and MPK3 in stomatal asymmetric cell division (ACD) cells.
messages: Cytoplasm
messages: Dually phosphorylated on Thr-221 and Tyr-223, which activates the enzyme. Dephosphorylated by DSPTP1B/MKP2.
messages: Interacts with MEKK1, MKK1 and MKK2. May form a ternary complex with MEKK1 and MKK1 or MKK2. Interacts with NDPK2, AP2C1, MKP1 and PTP1. Interacts with DSPTP1B/MKP2, especially during HR-like responses triggered by fungal elicitors. Interacts with MKK4, MKK5 and MKK6 (PubMed:12506203, PubMed:15225555, PubMed:17630279, PubMed:19513235, PubMed:19789277, PubMed:20626661, PubMed:21057191, PubMed:21575092, PubMed:27913741). Binds to LIP5 (PubMed:25010425). Interacts with VQ4 and IKU1/VQ14 (PubMed:24750137). Interacts with RACK1A, RACK1B and RACK1C (PubMed:25731164). Interacts with PTP1 (PubMed:27029354). Interacts with FLZ9 (Ref.48). Binds to BASL and YDA (PubMed:25843888).
messages: Mitogen-activated protein kinase (MAPK) which regulates abscisic acid (ABA) responses in a MAPKKK20-MKK5-MPK6 cascade involved in root growth (e.g. root cell division and elongation) and stomatal response (PubMed:27913741). Involved in oxidative stress-mediated signaling cascade (such as ozone). Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. May be involved in hypersensitive response (HR)-mediated signaling cascade by modulating LIP5 phosphorylation and subsequent multivesicular bodies (MVBs) trafficking. May phosphorylate regulators of WRKY transcription factors. Phosphorylates 1-aminocyclopropane-1-carboxylic acid synthases (ACS2 and ACS6) and may be involved in the regulation of bacterial elicitor flagellin-induced ethylene production. Regulates locally gene-mediated and basal resistance response to certain pathogens. May be involved in the cold and salinity stress-mediated MAP kinase signaling cascade (MEKK1, MKK1/MKK2 and MPK4/MPK6). MKK1-MPK6 module mediates abscisic acid (ABA)-dependent CAT1 expression with H(2)O(2) production and response to drought and salt stress. MKK1-MPK6 module is also involved in sugar signaling during the process of seed germination. MKK3-MPK6 module plays an important role in the jasmonate signal transduction pathway through the negative regulation of MYC2/JIN1 expression. MKK9-MPK3/MPK6 module phosphorylates and activates EIN3, leading to the promotion of EIN3-mediated transcription in ethylene signaling. MPK3/MPK6 cascade regulates camalexin synthesis through transcriptional regulation of the biosynthetic genes after pathogen infection. MKK9-MPK6 module positively regulates leaf senescence. YDA-MKK4/MKK5-MPK3/MPK6 module regulates stomatal cell fate before the guard mother cell (GMC) is specified. When activated, reinforces the feedback loop by phosphorylating BASL, and inhibits stomatal fate by phosphorylating SPCH (PubMed:25843888). This…
messages: Nucleus
messages: Reduced sensitivity to abscisic acid (ABA) during germination. Insensitivity to ABA in terms of root growth inhibition (e.g. root cell division and elongation) and stomatal response leading to increased water loss under dehydrated conditions (PubMed:27913741). Delayed senescence phenotype.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.
messages: cell cortex

3702:AT1G73100
gene id: 3702:AT1G73100
uniprot id: A0A5S9WTX3
uniprot id: Q9C5P4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although the SET domain contains the active site of enzymatic activity, both pre-SET and post-SET domains are required for methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Expressed in leaves stems and flowers.
messages: Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression.
messages: In the pre-SET domain, Cys residues bind 3 zinc ions that are arranged in a triangular cluster; some of these Cys residues contribute to the binding of two zinc ions within the cluster.
messages: Nucleus
messages: centromere

3702:AT3G28540
gene id: 3702:AT3G28540
uniprot id: Q9LH82
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Membrane

3702:AT3G26810
gene id: 3702:AT3G26810
uniprot id: Q9LW29
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Confers sensitivity to the virulent bacterial pathogen P.syringae (By similarity). Auxin receptor that mediates Aux/IAA proteins proteasomal degradation and auxin-regulated transcription. Involved in embryogenesis regulation by auxin.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with Aux/IAA proteins (IAA7) in an auxin-dependent manner.
messages: Repressed by miR393a (microRNA) in response to flg-22 (flagellin-derived peptide 22).
messages: The F-box is necessary for the interaction with SKP1.
messages: Ubiquitous, with higher levels in seedlings.

3702:AT3G08850
gene id: 3702:AT3G08850
uniprot id: A0A178V9S6
uniprot id: Q93YQ1
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat RAPTOR family.
messages: Cytoplasm
messages: Embryonic lethality when homozygous. Embryo development arrested at very early stage (early pre-globular stage), leading to aborted shrunken seeds. Constitutive autophagy (PubMed:27545962).
messages: Expressed in roots, leaves, flowers and seeds.
messages: Interacts with TOR, ATPK1 and ML1. Interacts with KIN10 (PubMed:27545962).
messages: Phosphorylated by KIN10.
messages: Probable component of the plant TOR kinase pathway that recruits substrates for TOR (PubMed:16377759, PubMed:29236692). Modulates plant cell growth and regulates the activity of ATPK1 kinase in response to osmotic stress (PubMed:16377759).

3702:AT2G29630
gene id: 3702:AT2G29630
uniprot id: A0A1P8B279
uniprot id: O82392
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino (white leaves) and lethal under normal culture conditions, probably due to an impairment in thiamine biosynthesis.
messages: Belongs to the ThiC family.
messages: Binds 1 [4Fe-4S] cluster per subunit. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
messages: Circadian-regulation (PubMed:23341335). Down-regulated by extrinsic thiamine, via a vitamin B1 derivative thiamine pyrophosphate (TPP)-sensing riboswitch regulation. Detected in both dark and light grown seedlings; increased progressively after transfer of etiolated seedlings to light. Up-regulated by salt, osmotic stress and abscisic acid (PubMed:22214485).
messages: First detected in five-days seedlings. In seedlings, mostly present at the root tips and in the jointed section between the hypocotyl and root. In two-leaves seedlings, expressed in leaves, cotyledons and vascular bundles of hypocotyls, and very weakly, in the roots. In flowers, detected in sepals, filaments and pistil tips, but not in petals. Later accumulates in the jointed region between the silique and silique stem, and in the tips of siliques. Decreasing expression during seed development (PubMed:25014715).
messages: Homodimer.
messages: Strongly expressed in cotyledons, leaves, flowers and siliques, and, to a lower extent, in roots (PubMed:18048325, PubMed:25014715). Expressed in all green tissues, but not in roots, seeds, and petals (PubMed:23341335).
messages: chloroplast stroma

3702:AT3G48500
gene id: 3702:AT3G48500
uniprot id: F4JF21
names: Subcellular Location Annotation
names: Subunit
messages: Component of the transcriptionally active chromosome (TAC) complexes (PubMed:21949211). Interacts with PTAC7 (PubMed:23082802).
messages: chloroplast

3702:AT1G01480
gene id: 3702:AT1G01480
uniprot id: A0A178WMN2
uniprot id: Q06402
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: 1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes catalyze the conversion of S-adenosyl-L-methionine (SAM) into 1-aminocyclopropane-1-carboxylate (ACC), a direct precursor of ethylene.
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: By ethylene. By indole-3-acetic acid (IAA) and cycloheximide (CHX).
messages: High in developing leaves and in flowers. Expressed in roots and siliques.
messages: Homodimer and heterodimer. In vivo, the relevance of heterodimerization with other ACS enzymes is however unsure (By similarity). Interacts with GRF3.
messages: May be processed at its C-terminus.
messages: Phosphorylated on serine residue by MAP kinase (MPK6).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: The stability of ACS proteins, and the regulation of such stability, play a central role in ethylene biosynthesis.

3702:AT3G16470
gene id: 3702:AT3G16470
uniprot id: A0A1I9LQM9
uniprot id: A0A654F7T7
uniprot id: O04309
names: Similarity
names: Subunit
messages: Belongs to the jacalin lectin family.
messages: Component of the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.

3702:AT1G69320
gene id: 3702:AT1G69320
uniprot id: A0A178WI24
uniprot id: Q4PSX1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Expressed in stems, apex, leaves, flowers, siliques and pollen.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-102 enhances binding affinity of the CLE10p peptide for its receptor.
messages: extracellular space

3702:AT1G79690
gene id: 3702:AT1G79690
uniprot id: Q8L831
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, stems and, at lower level, leaves.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.

3702:AT1G68510
gene id: 3702:AT1G68510
uniprot id: A0A178W6D5
uniprot id: Q9CA30
names: Similarity
messages: Belongs to the LOB domain-containing protein family.

3702:AT5G03240
gene id: 3702:AT5G03240
uniprot id: Q1EC66
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family.
messages: Cytoplasm
messages: For the sake of clarity sequence features are annotated only for the first chain, and are not repeated for each of the following chains.
messages: Nucleus
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either eL40 or eS31) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT5G13900
gene id: 3702:AT5G13900
uniprot id: Q9FFY3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Expressed in vascular tissues of all organs (PubMed:12472696). Expressed in seedlings, preferentially in hypocotyls and roots (PubMed:23893219). Also observed in siliques (PubMed:23893219).
messages: Lipid transfer protein that promotes the number of phloem (pro)cambial and pericycle cells.

3702:AT3G47570
gene id: 3702:AT3G47570
uniprot id: A0A654FFJ8
uniprot id: C0LGP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT5G25810
gene id: 3702:AT5G25810
uniprot id: A0A178URN2
uniprot id: Q39127
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Putative transcriptional activator.
messages: Slightly induced by cold stress.

3702:AT1G67460
gene id: 3702:AT1G67460
uniprot id: F4HTL8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family.
messages: Mitochondrion
messages: This protein is shorter compared to other members of the family and lacks the C-terminal part that binds zinc.

3702:AT5G60335
gene id: 3702:AT5G60335
uniprot id: Q9FJI2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 3-hydroxyl-[acyl-carrier-protein] (3-hydroxyl-ACP) dehydratase required for mitochondrial fatty acid synthesis (mtFAS) (PubMed:28202596). MtFAS are essential for photorespiration and plant development, probably by influencing mitochondrial membrane lipid composition and other lipid metabolic pathways (PubMed:28202596).
messages: Expressed in leaves, roots, siliques and flowers.
messages: Homodimer.
messages: Mitochondrion
messages: Thicker leaves due to enlarged mesophyll cells when grown in ambient air and associated with altered thylakoid membrane assembly and starch granule ultrastructure (PubMed:28202596). Dwarf plants characterized by reduced lipoylation of lipoylated proteins and altered metabolomes due to reduced catalytic activity of lipoylated enzymes; these phenotypes are partly reversed when grown in 1 percent CO(2) atmosphere (PubMed:28202596). Depleted 3-hydroxytetradecanoic acid levels (PubMed:28202596).

3702:AT5G06265
gene id: 3702:AT5G06265
uniprot id: A0A384LN01
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G18540
gene id: 3702:AT2G18540
uniprot id: F4IQK5
names: Function
names: Similarity
messages: Belongs to the 7S seed storage protein family.
messages: Seed storage protein.

3702:AT4G21640
gene id: 3702:AT4G21640
uniprot id: F4JJL8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT2G16390
gene id: 3702:AT2G16390
uniprot id: Q9SIW2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the helicase family.
messages: Nucleus
messages: Part of the chromatin-remodeling complex (DDR complex) that contains at least DRD1, DMS3 and RDM1. The DDR complex recruits/activates the RNA polymerases V and acts during siRNA-directed DNA methylation (RdDM) (PubMed:20409711, PubMed:22864289). Interacts with SUVH2 (PubMed:24463519, PubMed:24465213).
messages: Reduced association of NRPE1 with chromatin, leading to altered chromatin binding of the DDR complex (PubMed:19013275, PubMed:22864289). Defective in RNA-directed non-CpG DNA methylation resulting in reactivation of silenced genes and enhancers, whereas methylation of centromeric and rDNA repeats is unaffected (PubMed:15120073, PubMed:15947783, PubMed:15924141, PubMed:16741558, PubMed:19825647, PubMed:18425128). Reduced accumulation of 24-nt siRNAs and reduced DNA methylation of siRNA-directed DNA methylation (RdDM) target loci (PubMed:19204117, PubMed:22647529). Increase in CpG DNA methylation leading to abnormal maintenance of some silenced genes (PubMed:15947783). Derepression of solo retrotransposon large terminal repeats (LTRs) and of transposable elements (TE) edges accompanied by reduced cytosine methylation and transcriptional up-regulation of neighboring sequences, and associated with euchromatic histone modifications but little or no H3K9 dimethylation. By contrast, LTRs of retrotransposons that remain silent in disrupted plants despite reduced cytosine methylation lack euchromatic marks and have H3K9 dimethylation (PubMed:16724114, PubMed:23540698). Decondensation of the major pericentromeric repeats and depletion of the heterochromatic mark histone H3 lysine 9 dimethylation (H3K9me2) at chromocenters, leading to transcriptional reactivation of specific classes of pericentromeric 180-bp repeats and reduced heterochromatin (PubMed:19825650). Relieved exo-Pdsi self-silencing resulting in accumulation of dsRNA and Pdsi-derivating 21-nt mobile siRNAs which increase non-cell-autonomous silencing of endo-PDS in neighboring cells (PubMed:21771120). Increases susceptibility to the necrotrophic fungal pathogen Plectosphaerella cucumerina (PubMed:22242006).
messages: Subunit of the chromatin-remodeling complex (DDR complex) that mediates RNA polymerases IV and V (Pol IV and Pol V) recruitment to chromatin (PubMed:19013275, PubMed:22864289). Cooperates with Pol IV and Pol V to regulates RNA- and RNAi- (RNA interference) directed non-CpG de novo DNA methylation on cytosine of genes targeted for silencing and enhancers, also known as siRNA-directed DNA methylation (RdDM), thus leading to epigenetic modification of the genome and promoting/maintaining heterochromatin (PubMed:15120073, PubMed:15947783, PubMed:15924141, PubMed:16724114, PubMed:16741558, PubMed:19204117, PubMed:19825647, PubMed:22647529, PubMed:18425128). In collaboration with Pol V, mediates/maintains, in cis, methylation-associated self-silencing of exogenous transgene transcribing inverted-repeat (exo-IR) silencer (exo-Pdsi) to restrain exo-IR dsRNA accumulation and subsequent inappropriate silencing of active protein-coding genes (e.g. PDS) by exo-IR-derivating 24-nt siRNAs (PubMed:21771120). Also required to mediate loss of CpG methylation when the silencing inducer is withdrawn (PubMed:15947783). Required for the maintenance of retrotransposon large terminal repeats (LTRs) and transposable elements (TE) edges silencing mediated by cytosine methylation (PubMed:16724114, PubMed:23540698). Required for transcriptional repression of specific classes of pericentromeric 180-bp repeats by promoting condensation and histone H3 lysine 9 dimethylation (H3K9me2) at chromocenters (PubMed:19825650). Required for basal resistance against the necrotrophic fungal pathogen Plectosphaerella cucumerina (PubMed:22242006).

3702:AT2G34720
gene id: 3702:AT2G34720
uniprot id: A0A178VWS5
uniprot id: A0A1P8AYC2
uniprot id: Q8VY64
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYA/HAP2 subunit family.
messages: Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.
messages: Expressed in stems, caulines, and senescent flowers.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding.
messages: Nucleus
messages: Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

3702:AT1G78510
gene id: 3702:AT1G78510
uniprot id: Q8S948
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Decreased levels of plastoquinone-9 (PQ-9) and plastochromanol-8 (PC-8) in leaves (PubMed:23913686). The double mutants sps1 and sps2 exhibit an albino phenotype and are devoided of both PQ-9 and PC-8 in cotyledons (PubMed:23913686).
messages: Higher expression in leaves than in roots.
messages: Homodimer (PubMed:12437513). Interacts with FBN5 (PubMed:26432861).
messages: Induced by high light conditions.
messages: Involved in providing solanesyl diphosphate for plastoquinone-9 (PQ-9) formation in plastids (PubMed:12437513, PubMed:23913686, PubMed:26039552). Catalyzes the elongation of the prenyl side chain of PQ-9 in plastids (PubMed:23913686, PubMed:26039552). Contributes to the biosynthesis of plastochromanol-8 (PC-8) in plastids (PubMed:23913686, PubMed:26039552). Does not contribute to the synthesis of tocopherol or ubiquinone (PubMed:23913686). PQ-9 and PC-8 are lipophilic antioxidants that act as protectant against photooxidative stress under high light stress conditions (PubMed:23913686, PubMed:26039552, PubMed:29901834). Prefers geranylgeranyl diphosphate to farnesyl diphosphate as substrate (PubMed:12437513). No activity with geranyl diphosphate or dimethylallyl diphosphate as substrate (PubMed:12437513).
messages: Plants over-expressing SPS1 exhibit increased resistance to photooxidative stress, decreases in leaf bleaching, lipid peroxidation and PSII photoinhibition under excess light due to their increased capacities for plastoquinone-9 (PQ-9) biosynthesis (PubMed:26039552). Plants over-expressing SPS1 exhibit decreased singlet oxygen production in response to photooxidative stress due to increased levels of PQ-9, which acts as chemical quencher of singlet oxygen (PubMed:29901834).
messages: chloroplast

3702:AT5G02280
gene id: 3702:AT5G02280
uniprot id: A0A5S9Y0Z2
uniprot id: Q9LZ97
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAPP small subunits family.
messages: Endoplasmic reticulum
messages: Part of the multisubunit transport protein particle (TRAPP) complex.
messages: cis-Golgi network

3702:AT5G59120
gene id: 3702:AT5G59120
uniprot id: A0A654GCE5
uniprot id: Q9FIG2
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: The C-terminal propeptide is autocleaved.

3702:AT1G45130
gene id: 3702:AT1G45130
uniprot id: A0A1P8AMY9
uniprot id: Q9MAJ7
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Expressed in leaves and flowers.
messages: apoplast

3702:AT4G34340
gene id: 3702:AT4G34340
uniprot id: Q9SYZ9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAF8 family.
messages: Component of the TFIID complex. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa. Can homodimerize. Interacts with TAF4B, TAF5, TAF10, TAF12, TAF12B, TAF13 and TAF14.
messages: Expressed in roots, leaves and inflorescences.
messages: Nucleus
messages: TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription.

3702:AT3G05280
gene id: 3702:AT3G05280
uniprot id: A0A384K8E3
uniprot id: Q8GWB3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YIP1 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G29020
gene id: 3702:AT2G29020
uniprot id: A0A178VSC3
uniprot id: O81071
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EMC6 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G65685
gene id: 3702:AT5G65685
uniprot id: A0A1P8B9A6
uniprot id: A0A1P8B9B0
uniprot id: A0A1P8B9B9
uniprot id: A0A1P8B9C8
uniprot id: A0A384KM79
uniprot id: F4JXI7
uniprot id: Q8GWC5
names: Caution
names: Subcellular Location Annotation
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT5G38450
gene id: 3702:AT5G38450
uniprot id: Q9FF18
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By trans-zeatin and isopentenyladenine in roots. Down-regulated by auxin and abscisic acid in roots.
messages: Cytokinin hydroxylase that catalyzes the biosynthesis of trans-zeatin via the isopentenyladenine riboside 5'-monophosphate (iPRMP)-dependent pathway. Can use isopentenyladenosine-5'-monophosphate, isopentenyladenosine-5'-diphosphate and isopentenyladenosine-5'-triphosphate as substrate.
messages: Expressed in roots and flowers.
messages: Membrane
messages: Sequencing errors.

3702:AT4G17480
gene id: 3702:AT4G17480
uniprot id: A0A1P8B5G7
uniprot id: A0A5S9XU10
uniprot id: Q84JI7
names: Similarity
messages: Belongs to the palmitoyl-protein thioesterase family.

3702:AT2G28360
gene id: 3702:AT2G28360
uniprot id: F4IIN7
names: Similarity
messages: Belongs to the SAPS family.

3702:AT1G35467
gene id: 3702:AT1G35467
uniprot id: A8MQI8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Accumulates during senescence.
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT3G56340
gene id: 3702:AT3G56340
uniprot id: A0A178VFW7
uniprot id: Q9LYK9
names: Caution
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS26 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G17880
gene id: 3702:AT3G17880
uniprot id: Q8VWG7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the thioredoxin family.
messages: High sensitivity to heat shock.
messages: Oligomerization under high temperature.
messages: Thiol-disulfide oxidoreductase that possesses insulin disulfide bonds reducing activity, disulfide reductase, foldase chaperone and holdase chaperone activities. Heat shock causes oligomerization and formation of high molecular weiht (HMW) complexes with concomitant functional switching from a disulfide reductase and foldase chaperone to a holdase chaperone. May interact with HSP70 proteins through the TPR repeats.

3702:AT3G14820
gene id: 3702:AT3G14820
uniprot id: Q9LH73
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT4G08700
gene id: 3702:AT4G08700
uniprot id: Q8RY83
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT5G46874
gene id: 3702:AT5G46874
uniprot id: Q2V310
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G52920
gene id: 3702:AT1G52920
uniprot id: A0A7G2E456
uniprot id: F4IEM5
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LanC-like protein family.
messages: May interact (via C-terminus) with GPA1.
messages: May play a role in abscisic acid (ABA) signaling.
messages: No visible phenotype under normal growth conditions. However, in growth conditions described in PubMed:17347412 mutant plants have decreased sensitivity to abscisic acid (ABA).
messages: Was originally described as a plasma membrane G-protein coupled receptor (GPCR) that binds ABA. Binding of ABA to GCR2 results in the release of G protein and dissociation of the heterotrimeric complex to activate downstream ABA effectors and to trigger the ABA responses (PubMed:17347412). However, GCR2 has been controversial with respect to the reproducibility of the results (PubMed:17894782, PubMed:18714360, PubMed:19286934). Moreover, GCR2 lacks the prototypical seven transmembrane domains of GPCRs, and is homologous to mammalian lanthionine synthetase C-like (LANCL) proteins (PubMed:17991845). Intriguingly, it was shown that human granulocytes and insulin-producing rat insulinoma cells release ABA, and that LANCL2 is necessary for ABA binding and signaling in these cells (PubMed:19667068).

3702:AT2G44180
gene id: 3702:AT2G44180
uniprot id: A0A178VUM7
uniprot id: A0A384KR91
uniprot id: Q0WRL9
uniprot id: Q9FV49
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
messages: Cytoplasm
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous. Preferentially expressed in roots.

3702:AT1G05600
gene id: 3702:AT1G05600
uniprot id: Q9SYK1
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G04800
gene id: 3702:AT5G04800
uniprot id: A0A384K9G9
uniprot id: B9DGM0
uniprot id: Q9LZ17
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS17 family.

3702:AT3G01970
gene id: 3702:AT3G01970
uniprot id: A0A384KXL3
uniprot id: Q29Q72
uniprot id: Q9S763
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group I family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

3702:AT3G57420
gene id: 3702:AT3G57420
uniprot id: A0A384KXL5
uniprot id: Q9SCN0
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the STELLO family.
messages: Expressed in cells that are expanding or producing secondary cell walls.
messages: Golgi apparatus membrane
messages: Homo- and heterodimer with STL1 (PubMed:27277162). Interacts with CESA1, CESA3, CESA4, CESA6, CESA7 and CESA8, but not with GOT1 (PubMed:27277162).
messages: In classical Greek, STELLO mean 'to set in order, arrange, send'.
messages: No visible phenotype, due to the redundancy with STL1. Stl1 and stl2 double mutants are impaired in cellulose production and exhibit a stunted growth.
messages: Probable glycosyltransferase regulating the assembly and trafficking of cellulose synthase complexes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G05530
gene id: 3702:AT3G05530
uniprot id: A0A5S9XA09
uniprot id: Q9SEI2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AAA ATPase family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: Displays a severe male gametophyte development defects in cv. Wassilewskija but not in cv. Columbia due to the complementation by RPT5B.
messages: Nucleus
messages: The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (Probable). Interacts with transit peptides of proteins targeted to the chloroplast, and may be involved in the degradation of unimported plastid protein precursors (PubMed:24846764). Plays a essential role in the gametophyte development (PubMed:19223514). Involved in tolerance to zinc deficiency, possibly through alleviation of oxidative stresses or processing of poly-ubiquitinated proteins (PubMed:21389614).
messages: Ubiquitous.

3702:AT1G62480
gene id: 3702:AT1G62480
uniprot id: Q9SXE9
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds calcium Ca(2+) and may act as a signal mediator to buffer Ca(2+).
messages: Levels follow a circadian cycle with higher levels during the night and lower levels in light phases (PubMed:17145720). Accumulates in darkness within 24 hours, but repressed by light and the product of photosynthesis (e.g. sucrose) (at protein level) (PubMed:17145720). Induced by sucrose depletion, but activated by mannitol and sorbitol (PubMed:17145720). Triggered by gibberellic acid (GA) and salt stresses (e.g. NaCl and KCl) (PubMed:17145720). Suppressed by a high concentration of calcium Ca(2+) and of other metal ions (PubMed:17145720).
messages: Predominantly expressed in petioles (at protein level) (PubMed:17145720). Mainly observed in shoots, flowers, siliques and roots, and, to a lower extent, in stems and leaves (PubMed:17145720).
messages: cytosol

3702:AT1G50990
gene id: 3702:AT1G50990
uniprot id: A0A1P8ANY4
uniprot id: A0A654EHE9
uniprot id: F4I7Y4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with BRI1, ASK7/BIN2, BSK1, BSK6 and BSK8.
messages: Interacts with BRI1.
messages: Membrane
messages: Phosphorylated by BRI1, ASK7/BIN2 and ASK9/BIL2.
messages: Probable serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.
messages: Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.

3702:AT4G24160
gene id: 3702:AT4G24160
uniprot id: A0A178UYX3
uniprot id: O22975
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accumulation of neutral lipid droplets with marked increase in absolute triacylglycerol levels in leaf mesophyll cells.
messages: Belongs to the peptidase S33 family. ABHD4/ABHD5 subfamily.
messages: Cytoplasm
messages: Lysophosphatidic acid acyltransferase which functions in phosphatidic acid biosynthesis. Is highly specific for lysophosphatidic acid and able to use different acyl-CoA donors. May regulate neutral lipid accumulation and participate in the regulation of lipid turnover in vegetative cells. Possesses additional triacylglycerol lipase and phospholipase A2 activities in vitro. Is not active as esterase or lysophospholipase.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G04350
gene id: 3702:AT5G04350
uniprot id: F4JW86
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G02740
gene id: 3702:AT5G02740
uniprot id: A0A178UQM0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G27450
gene id: 3702:AT5G27450
uniprot id: A0A178UNV0
uniprot id: P46086
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
messages: Catalyzes the phosphorylation of mevalonate to mevalonate 5-phosphate, a key step in isoprenoid and cholesterol biosynthesis.
messages: Cytoplasm
messages: Its activity is inhibited in vitro by geranyl pyrophosphate (GPP) and farnesyl pyrophosphate (FPP) that bind competitively at the ATP-binding site on the enzyme.

3702:AT3G20240
gene id: 3702:AT3G20240
uniprot id: A0A178VFS7
uniprot id: Q9LJX5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Probable mitochondrial adenylate carrier that catalyzes the transport of ATP, ADP and AMP.

3702:AT2G29190
gene id: 3702:AT2G29190
uniprot id: Q9ZW06
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. Binds the APUM-binding elements (APBEs) in the 3'-UTR mRNA sequence of CLV1, PNH, WUS and FAS2.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT4G12960
gene id: 3702:AT4G12960
uniprot id: F4JRI7
uniprot id: Q9SV73
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GILT family.
messages: Dimer; disulfide-linked.
messages: Expressed in the outer integument of seed coat.
messages: Lysosomal thiol reductase that can reduce protein disulfide bonds. May facilitate the complete unfolding of proteins destined for lysosomal degradation.
messages: Lysosome
messages: Secreted

3702:AT1G68540
gene id: 3702:AT1G68540
uniprot id: Q9CA28
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.
messages: Cytoplasm
messages: May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.
messages: No visible phenotype under normal growth conditions.

3702:AT2G22860
gene id: 3702:AT2G22860
uniprot id: O81003
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phytosulfokine family.
messages: Expressed in stems, roots and leaves.
messages: PSK-beta is an enzymatic derivative of PSK-alpha.
messages: Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
messages: Secreted
messages: Sulfation is important for activity and for the binding to a putative membrane receptor.
messages: Up-regulated by fungal infection.

3702:AT3G54870
gene id: 3702:AT3G54870
uniprot id: A0A178V659
uniprot id: A0A1I9LP88
uniprot id: Q9SV36
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a plus-end microtubule-dependent motor protein (PubMed:25159991). Involved in the control of root hair tip growth by promoting microtubule depolymerization and limiting the accumulation of endoplasmic microtubules (PubMed:17957256, PubMed:17971038, PubMed:24400013, PubMed:25159991). In vitro, binds to polymerized actin through ARM repeats, and to polymerized tubulin through N-terminal motor domain (PubMed:17957256).
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. Ungrouped subfamily.
messages: D-BOX motif functions as a recognition motif for the ubiquitination machinery.
messages: Expressed in young root hair-forming cells and in root hair-producing cells at the boundary between the hypocotyl and root. Expressed in cotyledons, young leaves, trichomes and flowers.
messages: Interacts (via C-terminus) with NEK5.
messages: Wavy growth phenotype with altered root hairs displaying multiple tips and branches (PubMed:18539780, PubMed:24400013). Reduced microtubules catastrophe frequency and growth rates (PubMed:25159991).
messages: cytoskeleton
messages: phragmoplast
messages: spindle

3702:AT2G23080
gene id: 3702:AT2G23080
uniprot id: A0A178VTA8
uniprot id: O64817
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CK2 subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site. The tetrameric holoenzyme CK2 is composed of two alpha and two beta subunits (By similarity). Acts as circadian clock component that maintains the correct period length through phosphorylation of CCA1 (PubMed:21900482).
messages: Cytoplasm
messages: Heterotetramer of two catalytic alpha subunits and two regulatory beta subunits.
messages: No visible phenotype under normal growth conditions, but the triple mutant cka1, cka2 and cka3 show altered circadian rhythms and delayed flowering under long day conditions.
messages: Nucleus
messages: nucleolus

3702:AT1G17120
gene id: 3702:AT1G17120
uniprot id: Q9SHH0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Cell membrane
messages: Expressed in roots, stems, flowers and leaves. Mostly present in young and rapidly dividing tissues such as the shoot and root apical meristem, and in young leaves and petioles during seedling development.
messages: Permease involved in the transport of the cationic neutral or acidic amino acids.

3702:AT1G50410
gene id: 3702:AT1G50410
uniprot id: A0A1P8AWQ0
uniprot id: A0A7G2E168
uniprot id: Q94BR5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
messages: Interacts with SUVR2.
messages: Nucleus
messages: Probable helicase-like transcription factor involved in transcriptional gene silencing. Associates with SUVR2 and contributes to transcriptional gene silencing at RNA-directed DNA methylation (RdDM) target loci but also at RdDM-independent target loci. May be involved in nucleosome positioning to form ordered nucleosome arrays on chromatin (PubMed:25420628). Associates with SUVR2 and functions redundantly with FRG1. Required for the efficient methylation of a broad range of RdDM target loci (PubMed:25425661).

3702:AT2G29980
gene id: 3702:AT2G29980
uniprot id: A0A178VX43
uniprot id: F4ILQ4
uniprot id: P48623
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Abundant in leaves and seedlings. Barely detectable in root tissue.
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Endoplasmic reticulum membrane
messages: Microsomal (ER) omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.

3702:AT3G07370
gene id: 3702:AT3G07370
uniprot id: Q9SRS9
names: Domain
names: Function
names: Induction
names: Subunit
messages: By abiotic stresses such as chilling, heat-shock and salts (selenate and NaCl).
messages: Has E3 ubiquitin-protein ligase activity and may target misfolded substrates towards proteasomal degradation. Regulates the activity of some serine/threonine-protein phosphatases by E3 ubiquitin-protein ligase activity. Required for responses to biotic and abiotic stresses such as auxin, abscisic acid (ABA), low and high temperature and darkness, probably through the activation of serine/threonine-protein phosphatase and the subsequent modification of the plasma membrane composition. Regulates the chloroplastic Clp proteolytic activity in response to stresses. Ubiquitylates FtsH1, a component of the chloroplast FtsH protease, and affects protein degradation in chloroplasts. Mediates plastid precursor degradation to prevent cytosolic precursor accumulation, together with the molecular chaperone HSC70-4. Mediates ubiquitination of transit peptides and thereby led to their degradation through the ubiquitin-proteasome system.
messages: Interacts with HSC70-4, PP2AA1, PP2AA3 and PP2A5, as well as with UBC8, UBC9 and UBC10. Interacts also with the chloroplastic proteolytic subunits ClpP4, FtsH1 and FtsH2.
messages: The U-box domain is required for the ubiquitin protein ligase activity.

3702:AT4G01750
gene id: 3702:AT4G01750
uniprot id: A0A5S9XNZ9
uniprot id: Q9ZSJ0
uniprot id: W8PUN7
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 77 family.
messages: Catalyzes the transfer of D-xylose from UDP-alpha-D-xylose onto L-fucose. Probably involved in the biosynthesis of rhamnogalacturonan II (RG-II) through xylosylation of the internal fucose moiety of the A-chain of RG-II, a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues such as roots and pollen tube growth and elongation.
messages: Expressed in roots, rosette leaves, stems and flowers.
messages: Glycosylated.
messages: Golgi apparatus membrane
messages: No visible phenotype under normal growth conditions.
messages: The conserved DXD motif is involved in enzyme activity.

3702:AT5G65000
gene id: 3702:AT5G65000
uniprot id: A0A654GE75
uniprot id: Q8LES0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nucleotide-sugar transporter family. CMP-Sialate:CMP antiporter (TC 2.A.7.12) subfamily.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, cotyledons, leaves, stems, flowers and siliques.
messages: Mediates the transport of UDP-linked acetylated hexosamines across the endoplasmic reticulum (ER) membrane (PubMed:25535363). Facilitates UDP-N-acetylglucosamine (UDP-GlcNAc) and UDP-N-acetylgalactosamine (UDP-GalNAc) transport (PubMed:25535363). Regulates the cytokinin signal in meristematic cells through modulating activity of cytokinin oxidases/dehydrogenases (PubMed:25535363). Part of the ER quality control system, which determines the fate of aberrant proteins in the secretory pathway (PubMed:25535363).
messages: Membrane

3702:AT1G74030
gene id: 3702:AT1G74030
uniprot id: Q9C9C4
names: Cofactor
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the enolase family.
messages: Distorted trichomes and reduced numbers of root hairs.
messages: Highly expressed in young roots, young siliques, and shoot apex. Lowly expressed in young leaves, stems and cotyledons.
messages: Mg(2+) is required for catalysis and for stabilizing the dimer.
messages: chloroplast

3702:AT3G59950
gene id: 3702:AT3G59950
uniprot id: A0A178VJJ3
uniprot id: A0A1I9LMQ8
uniprot id: A0A1I9LMQ9
uniprot id: F4J9I3
uniprot id: Q9M1Y0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase C54 family.
messages: Constitutively expressed.
messages: Cysteine protease that plays a key role in autophagy by mediating both proteolytic activation and delipidation of ATG8 family proteins.
messages: Cysteine protease that plays a key role in autophagy by mediating both proteolytic activation and delipidation of ATG8 family proteins. The protease activity is required for proteolytic activation of ATG8 family proteins: cleaves the C-terminal amino acid of ATG8 proteins to reveal a C-terminal glycine (By similarity). Exposure of the glycine at the C-terminus is essential for ATG8 proteins conjugation to phosphatidylethanolamine (PE) and insertion to membranes, which is necessary for autophagy. In addition to the protease activity, also mediates delipidation of PE-conjugated ATG8 proteins (By similarity).
messages: Cytoplasm
messages: Interacts with ATG8a and ATG8d.
messages: May be due to intron retention.

3702:AT3G02930
gene id: 3702:AT3G02930
uniprot id: Q9M8T5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WEB family.
messages: chloroplast

3702:AT3G50450
gene id: 3702:AT3G50450
uniprot id: Q9SCS9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant RPW8 protein family.
messages: Expressed in leaves after powdery mildew infection (e.g. Erysiphe cichoracearum UCSC1).
messages: Membrane
messages: Probable disease resistance (R) protein.

3702:AT1G04940
gene id: 3702:AT1G04940
uniprot id: A0A178W3W6
uniprot id: Q8GZ79
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino and seedling lethality. Tic20-I and tic20-IV double mutant is embryo lethal.
messages: Belongs to the Tic20 family.
messages: Expressed in leaves, shoots and roots. High expression in mature photosynthetic tissues. Lower levels in non-photosynthetic tissues and roots.
messages: Highly expressed during germination and early development, with levels peaking at 25 days.
messages: Involved in protein precursor import into chloroplasts.
messages: Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope. Seems to be specific for photosynthesis-related pre-proteins. Partially redundant with TIC20-IV, but not with TIC20-II or TIC20-V.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the Tic complex. Component of the 1-MD complex, composed of TIC20-I, TIC214, TIC100 and TIC56 (PubMed:23372012). Interacts with the translocating preproteins. Hydrolysis of ATP is essential for the formation of this complex(PubMed:19531596, PubMed:23372012). The 1-MD complex interacts with TIC21 (PubMed:19531596).
messages: chloroplast inner membrane
messages: chloroplast membrane

3702:AT5G04700
gene id: 3702:AT5G04700
uniprot id: A0A654FY99
uniprot id: Q9LZ27
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G18610
gene id: 3702:AT4G18610
uniprot id: Q9SN52
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant homeotic and developmental regulators ALOG protein family.
messages: Nucleus
messages: Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light.

3702:AT1G64510
gene id: 3702:AT1G64510
uniprot id: A0A178WQK9
uniprot id: A0A1P8AV66
uniprot id: Q8VY91
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with bS18 to 16S ribosomal RNA.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3702:AT3G24210
gene id: 3702:AT3G24210
uniprot id: F4J6I7
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G13240
gene id: 3702:AT5G13240
uniprot id: A0A1P8BBF5
uniprot id: A0A1P8BBF6
uniprot id: A0A5S9Y5X9
uniprot id: A0A7G2FDC3
uniprot id: Q8RXT1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MAF1 family.
messages: Nucleus

3702:AT1G64480
gene id: 3702:AT1G64480
uniprot id: A0A178W6J9
uniprot id: A0A384KGE1
uniprot id: A0A384KNV3
uniprot id: Q0V872
uniprot id: Q9FUQ7
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
messages: Belongs to the calcineurin regulatory subunit family.
messages: Cell membrane
messages: Cytoplasm
messages: Homodimer. Interacts with CIPK.
messages: Interacts with CIPK23. Interacts with CIPK14 at the cell membrane exclusively.
messages: Membrane
messages: Nucleus
messages: The N-terminal 16 amino acids are sufficient for the cell membrane targeting of a heterologous protein.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G22330
gene id: 3702:AT2G22330
uniprot id: A0A178W1U6
uniprot id: A0A1P8AYN1
uniprot id: Q501D8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Converts tryptophan to indole-3-acetaldoxime, a precursor for tryptophan derived glucosinolates and indole-3-acetic acid (IAA).
messages: Membrane

3702:AT3G21980
gene id: 3702:AT3G21980
uniprot id: Q9LRL0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Could be the product of a pseudogene.
messages: Lacks the Cys (here Ser-215), present in the DUF26 domain, which is one of the conserved features of the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT2G32835
gene id: 3702:AT2G32835
uniprot id: A0A178VUV7
uniprot id: A8MRM1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT1G24450
gene id: 3702:AT1G24450
uniprot id: Q9FYL8
names: Disruption Phenotype
names: Function
messages: Failure of fusion of the polar nuclei during megagametogenesis.
messages: Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus.

3702:AT3G10630
gene id: 3702:AT3G10630
uniprot id: A0A384L351
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G37474
gene id: 3702:AT5G37474
uniprot id: Q2V328
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G12390
gene id: 3702:AT5G12390
uniprot id: A0A178U9A0
uniprot id: Q94CK3
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FIS1 family.
messages: Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
messages: Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. In association with PEX11C, PEX11D, PEX11E and DRP3A, is involved in cell cycle-associated constitutive self-replication of preexisting peroxisomes.
messages: Interacts with PEX11A, PEX11B, PEX11C, PEX11D and PEX11E.
messages: Membrane
messages: Mitochondrion outer membrane
messages: Peroxisome membrane
messages: Plants silencing FIS1B show reduced growth, increase in the size of mitochondria and decrease in the number of mitochondria per cell (PubMed:18785999). Overexpression of FIS1B increases the fission of peroxisomes and mitochondria (PubMed:19825601).
messages: The C-terminus is necessary for mitochondrial or peroxisomal targeting, while the N-terminus is necessary for mitochondrial or peroxisomal fission.

3702:AT5G09220
gene id: 3702:AT5G09220
uniprot id: Q38967
names: Activity Regulation
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Amino acid-proton symporter. Stereospecific transporter with a broad specificity for histidine, arginine, glutamate and neutral amino acids, favoring small amino acids such as alanine, asparagine and glutamine. Accepts also large aromatic residues such as in phenlalanine or tyrosine. Has a much higher affinity for basic amino acids as compared with AAP1. May function in xylem-to-phloem transfer and in uptake of amino acids assimilated in the green silique tissue.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane
messages: Highly expressed in developing pods. Found in the vascular strands of siliques, cotyledons, leaves and roots, in the inner phloem of stems, and in the funiculi. Lower levels of expression in flowers. Not expressed in seeds.
messages: Inhibited by diethylpyrocarbonate (DEPC).
messages: Strongly induced at heart stage of embryogenesis.

3702:AT1G76270
gene id: 3702:AT1G76270
uniprot id: A0A5S9WUV6
uniprot id: Q949U4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT3G23430
gene id: 3702:AT3G23430
uniprot id: A0A178VEL9
uniprot id: Q8S403
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SYG1 (TC 2.A.94) family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Inositol polyphosphate sensor that associates with transcription factors to regulate inorganic phosphate (Pi) starvation responses (PubMed:27080106). Probably acts by binding inositol polyphosphate via its SPX domain (PubMed:27080106). Acts as a Pi exporter, mediating efflux of Pi out of cells (PubMed:21309867, PubMed:22449068). Transfers Pi from the epidermal and cortical cells to the root xylem vessels (PubMed:11971143). Involved in the transfer of Pi from roots to shoots (PubMed:11971143, PubMed:17461783). Involved in abscisic acid (ABA) induction of stomatal closure and ABA repression of stomatal opening (PubMed:22612335).
messages: Interacts with PHO2.
messages: Membrane
messages: PHO1 degradation is PHO2 dependent and involves multivesicular body-mediated vacuolar proteolysis (PubMed:22634761).
messages: Pi content in shoot of pho1 mutant can be restored to wild-type levels after treatment with cytokinins.
messages: Predominantly in roots, but also weak expression in the lower part of the hypocotyl (PubMed:11971143). In the stellar cells, including the pericycle and xylem parenchyma cells, but not in the cortical or epidermal cells (PubMed:11971143). Expressed in guard cells (PubMed:22612335).
messages: Strong reduction in plant size and biomass. Severe deficiency in shoot Pi level, but normal root Pi content.
messages: The EXS domain is essential for Pi efflux out of cells and is necessary for the endomembrane localization.
messages: The SPX domain provides a basic binding surface for inositol polyphosphate signaling molecules (PubMed:27080106).
messages: Up-regulated by sucrose and Pi deficiency in roots (PubMed:18094993). Down-regulated by auxin, cytokinin and abscisic acid (ABA) (PubMed:18094993). Up-regulated in leaves following treatment with ABA (PubMed:22612335). Down-regulated by the transcription factors WRKY6 and WRKY42 (PubMed:25733771).
messages: trans-Golgi network membrane

3702:AT4G03115
gene id: 3702:AT4G03115
uniprot id: A0A1P8B797
uniprot id: A0A1P8B7A0
uniprot id: A0A1P8B7A1
uniprot id: A0A1P8B7B9
uniprot id: A0A654FLS8
uniprot id: A0A7G2EZR5
uniprot id: F4JI50
uniprot id: Q0WQ88
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT3G46355
gene id: 3702:AT3G46355
uniprot id: A0A1I9LTT1
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G39900
gene id: 3702:AT5G39900
uniprot id: A0A5S9YBS9
uniprot id: Q9FLE4
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GTP-binding elongation factor family. LepA subfamily.
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
messages: Mitochondrion inner membrane
messages: Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
messages: This protein may be expected to contain an N-terminal transit peptide but none has been predicted.

3702:AT5G57920
gene id: 3702:AT5G57920
uniprot id: A0A1P8BFN6
uniprot id: A0A5S9YG51
uniprot id: Q8L6Z5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the early nodulin-like (ENODL) family.
messages: Cell membrane
messages: May act as a carbohydrate transporter.
messages: Mostly expressed in flowers, and, to a lower extent, in leaves, but barely in seedlings, stems, seeds and roots.

3702:AT2G46770
gene id: 3702:AT2G46770
uniprot id: Q84WP6
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in various aboveground tissues undergoing thickening of the lignified secondary wall such as anthers, filaments of stamens, the base of carpels, styles, the boundaries between siliques and pedicels, the midrib of leaf veins, and inflorescence stems, specifically in interfascicular fibers (sclerenchyma), cells differentiating into vascular vessels, and xylary fibers (secondary xylem).
messages: Nucleus
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.
messages: Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulate the secondary cell wall lignification of other tissues.

3702:AT1G69940
gene id: 3702:AT1G69940
uniprot id: Q84WM7
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin. Involved in the pollen tube growth and determination of pollen tube morphology.
messages: After germination, the pollen tube is sunted, curved and has an irregular morphology. No effect on the morphology of ungerminated pollen grains, on the efficiency of pollen germination, fertilization or seed production.
messages: Belongs to the pectinesterase family.
messages: Endoplasmic reticulum
messages: Expressed in mature pollen grains in the anthers and on the stigma. Found in pollen tubes within the style. Located at the tip and in the shank of the pollen tube.
messages: Golgi apparatus
messages: Interacts with PMEI2, and in vitro with PMEI1.
messages: The pectin methylesterase activity is inhibited by PMEI2.
messages: cell wall

3702:AT5G39150
gene id: 3702:AT5G39150
uniprot id: A0A654G6B6
uniprot id: Q9FIC6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT3G58070
gene id: 3702:AT3G58070
uniprot id: Q84WI0
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By gibberellin.
messages: Expressed in inflorescence meristems, floral meristems and stem epidermis.
messages: Nucleus
messages: Plants over-expressing GIS have delayed shoot maturation and flowering, and a strong production of trichome on the inflorescence.
messages: Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin (GA) (PubMed:16679458, PubMed:17507408). Mediates the induction of GL1 expression by GA in inflorescence organs and is antagonized in its action by the DELLA repressor GAI. Acts upstream of the trichome initiation regulators GL1 and GL3, and downstream of the GA signaling repressor SPINDLY (SPY) (PubMed:16679458). Does not play a significant role in the cytokinin response (PubMed:17507408). Controls trichome branching through GA signaling (PubMed:22210898, PubMed:23825141). Acts downstream of the key regulator STICHEL (STI) in an endoreduplication-independent pathway (PubMed:22210898). Controls trichome cell division indirectly by acting downstream of a key endoreduplication regulator SIAMESE (SIM) (PubMed:23825141).
messages: Reduced trichome production on cauline leaves, stem internodes and branches, and sepals.

3702:AT2G33385
gene id: 3702:AT2G33385
uniprot id: A0A1P8AX53
uniprot id: A0A1P8AX59
uniprot id: F4IVU0
uniprot id: F4IVU1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARPC2 family.
messages: Cell projection
messages: Component of the Arp2/3 complex composed of ARP2, ARP3, ARPC1/p41-ARC, ARPC2/p34-ARC, ARPC3/p21-ARC, ARPC4/p20-ARC and ARPC5/p16-ARC.
messages: Component of the Arp2/3 complex.
messages: Expressed at low levels in all tissues with a relatively highest expression in inflorescences.
messages: Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
messages: Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (By similarity). Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development (By similarity).
messages: cytoskeleton

3702:AT2G34480
gene id: 3702:AT2G34480
uniprot id: A0A178VW11
uniprot id: A0A1P8AY36
uniprot id: P51418
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL20 family.

3702:AT5G21222
gene id: 3702:AT5G21222
uniprot id: Q8S9D1
names: Domain
names: Similarity
messages: In the C-terminal section; belongs to the PPR family. P subfamily.
messages: In the N-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT4G38240
gene id: 3702:AT4G38240
uniprot id: A0A654FWP6
uniprot id: F4JTL6
uniprot id: Q9XGM8
uniprot id: W8Q2W3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 13 family.
messages: Creation of a second N-glycosylation site in mutant cgl1 C5/cgl1-1 interferes with protein folding and sequesters the protein for degradation in the endoplasmic reticulum.
messages: Expressed in roots, stems, leaves and flowers.
messages: Glycosylated.
messages: Golgi apparatus membrane
messages: Initiates complex N-linked carbohydrate formation. Essential for the conversion of high-mannose to hybrid and complex N-glycans.
messages: Initiates complex N-linked carbohydrate formation. Essential for the conversion of high-mannose to hybrid and complex N-glycans. Required for normal root growth and morphology.
messages: Membrane
messages: Plants have an increased salt-sensitivity resulting in growth inhibition, aberrant root-tip morphology and callose accumulation.
messages: The cofactor is mostly bound to the substrate.

3702:AT2G28225
gene id: 3702:AT2G28225
uniprot id: A0A1P8B0H2
uniprot id: A0A654EWW3
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT5G15660
gene id: 3702:AT5G15660
uniprot id: A0A178UD40
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G17740
gene id: 3702:AT4G17740
uniprot id: A0A5S9XTG7
uniprot id: O23614
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S41A family.
messages: Protease involved in the C-terminal processing of the chloroplastic D1 protein of photosystem II. This proteolytic processing is necessary to allow the light-driven assembly of the tetranuclear manganese cluster, which is responsible for photosynthetic water oxidation.
messages: chloroplast thylakoid lumen

3702:AT1G28070
gene id: 3702:AT1G28070
uniprot id: Q9C7E6
names: Function
names: Subunit
messages: May interact with BHLH122/CFLAP1 and BHLH80/CFLAP2.
messages: May regulate negatively the cuticle development by interacting with the HD-ZIP IV transcription factor HDG1.

3702:AT1G10620
gene id: 3702:AT1G10620
uniprot id: A0A178W8M0
uniprot id: Q9SGY7
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Mostly expressed in flower buds.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G23630
gene id: 3702:AT5G23630
uniprot id: Q9LT02
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
messages: Endoplasmic reticulum membrane
messages: Highly expressed in root meristem. Expressed in pavement cells of trichomes, stipules, stamens and pollen grains.
messages: Imbalances in cation homeostasis and severe reduction in fertility. Increased inhibition of primary root growth in low inorganic phosphate conditions.
messages: Mediates manganese transport into the endoplasmic reticulum. The ATPase activity is required for cellular manganese homeostasis (By similarity). Plays an important role in pollen and root development through its impact on protein secretion and transport processes. Functions together with LPR1 and LPR2 in a common pathway that adjusts root meristem activity to phosphate availability. Under phosphate limitation, restricts SHR movement in root meristem and is required for maintaining SCR expression in the root meristem stem-cell niche as well as for proximal meristem activity. Can complement the yeast spf1 mutant.

3702:ArthCp088
gene id: 3702:ArthCp088
uniprot id: P61841
uniprot id: Q6KGZ1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3702:AT1G72880
gene id: 3702:AT1G72880
uniprot id: A0A178WAH4
uniprot id: Q84MD7
names: Caution
names: Similarity
messages: Belongs to the SurE nucleotidase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G22620
gene id: 3702:AT3G22620
uniprot id: A0A384LPV1
uniprot id: Q9LJ85
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Expressed in seedlings, preferentially in hypocotyls and roots (PubMed:23893219). Also observed in siliques and sepals (PubMed:23893219).
messages: Membrane
messages: Probable lipid transfer protein.

3702:AT5G21120
gene id: 3702:AT5G21120
uniprot id: A0A1P8BG66
uniprot id: A0A5S9Y625
uniprot id: O23115
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as homodimer to bind the primary ethylene response element.
messages: Belongs to the EIN3 family.
messages: Nucleus
messages: Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter.

3702:AT2G37120
gene id: 3702:AT2G37120
uniprot id: A0A178VX36
uniprot id: Q42337
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the S1FA transcription factor family.
messages: DNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter.
messages: Nucleus

3702:AT3G15820
gene id: 3702:AT3G15820
uniprot id: Q9LVZ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphatidylcholine:diacylglycerol cholinephosphotransferase family.
messages: Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase that catalyzes the transfer of the phosphocholine headgroup from phosphatidylcholine (PC) to diacylglycerol, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway.
messages: Membrane
messages: Reduction of 18:2 and 18:3 triacylglycerols (TAG) accumulation in seeds by 40 percent.

3702:AT1G03140
gene id: 3702:AT1G03140
uniprot id: A0A178WM57
uniprot id: Q9SA55
names: Similarity
messages: Belongs to the PRP18 family.

3702:AT2G21560
gene id: 3702:AT2G21560
uniprot id: A0A178VN85
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G39200
gene id: 3702:AT2G39200
uniprot id: A0A178VNS1
uniprot id: O80961
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT1G56150
gene id: 3702:AT1G56150
uniprot id: A0A178WDA4
uniprot id: Q9SGU2
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARG7 family.
messages: Cytoplasm
messages: Extensively expressed in guard mother cells and young guard cells of cotyledons and leaves during stomatal formation.
messages: Highly expressed in the steles of roots and hypocotyls.
messages: Plays a role in the regulation of cell expansion, root meristem patterning and auxin transport.

3702:AT1G71330
gene id: 3702:AT1G71330
uniprot id: Q9FVV9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Membrane

3702:AT2G40720
gene id: 3702:AT2G40720
uniprot id: Q7XJN6
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT2G30550
gene id: 3702:AT2G30550
uniprot id: Q3EBR6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acylhydrolase with broad specificity (PubMed:19527719). Catalyzes the hydrolysis of phosphatidylcholine at the sn-1 position (PubMed:19527719). Possesses moderate activity toward phosphatidylcholine (PC), monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and triacylglycerol (TAG) (PubMed:19527719).
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Interacts with SBP1.
messages: Major isoform.
messages: No visible phenotype under normal growth conditions.
messages: Slightly induced by wounding (PubMed:18267087). Induced by wounding (PubMed:24430866, PubMed:31928671). Induced by cadmium and selenium in roots (PubMed:31928671).
messages: Widely expressed (PubMed:19527719). Highly expressed in leaves and stems (PubMed:19527719).
messages: chloroplast

3702:AT4G25340
gene id: 3702:AT4G25340
uniprot id: Q93ZG9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FKBP-type PPIase family.
messages: Broadly expressed in leaves, flowers, stems and roots. Detected in root apical meristem region and pollen.
messages: Interacts with histone H3.
messages: Nucleus
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Histone chaperone possibly involved in H3/H4 deposition to the nucleosome. Associates with 18S rDNA chromatin and negatively regulates the level of its expression.

3702:AT1G62010
gene id: 3702:AT1G62010
uniprot id: A0A178W2N1
uniprot id: O80705
names: Similarity
messages: Belongs to the mTERF family.

3702:AT5G39410
gene id: 3702:AT5G39410
uniprot id: Q8LGI2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the saccharopine dehydrogenase family.
messages: Mitochondrion membrane

3702:AT1G26970
gene id: 3702:AT1G26970
uniprot id: A0A178WFX6
uniprot id: Q5PP29
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: May be involved in plant defense signaling.

3702:AT5G24930
gene id: 3702:AT5G24930
uniprot id: C0SVQ4
uniprot id: Q940T9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Nucleus

3702:AT4G25970
gene id: 3702:AT4G25970
uniprot id: A0A654FSU3
uniprot id: A4GNA8
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type II sub-subfamily.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
messages: Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Contributes only to a minor proportion of PtdEtn production.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems and flowers.
messages: Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The autoendoproteolytic cleavage occurs by a canonical serine protease mechanism, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain. During this reaction, the Ser that is part of the protease active site of the proenzyme becomes the pyruvoyl prosthetic group, which constitutes an essential element of the active site of the mature decarboxylase.
messages: No visible phenotype under normal growth conditions.
messages: The C2 domains have an essential, but non-catalytic function. They may facilitate interactions with other proteins and are required for lipid transport function.

3702:AT2G33100
gene id: 3702:AT2G33100
uniprot id: O49323
uniprot id: W8PVL4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

3702:AT2G36500
gene id: 3702:AT2G36500
uniprot id: A0A654FA17
uniprot id: Q9SJQ5
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G18100
gene id: 3702:AT5G18100
uniprot id: A0A5S9Y7F6
uniprot id: Q9FK60
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Cu-Zn superoxide dismutase family.
messages: Binds 1 copper ion per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
messages: Expressed in leaves (at protein level).
messages: Homodimer.
messages: Peroxisome
messages: Upon photosynthetically active radiation (PAR) (e.g. light fluence) increase or after high-light pulse, and UV-B treatment. Accumulates in response to ozone fumigation, during recovery. Repressed by salt stress.

3702:AT1G65690
gene id: 3702:AT1G65690
uniprot id: Q8LD98
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Highly expressed in seeds and at lower level in roots and senescing leaves. Expressed in leaves and flowers.
messages: Homodimer.
messages: Induced by abscisic acid (ABA), osmotic shock and drought stress. Slightly induced by salt stress.
messages: No visible phenotype under normal growth conditions, but mutant seeds show decreased sensitivity to abscisic acid (ABA) during germination.
messages: Plays an important role in the abiotic stresses-induced abscisic acid (ABA) signaling and biosynthesis. Acts as positive regulator of ABA-mediated seed germination inhibition. Functions downstream of ABF2/AREB1, ABF4/AREB2 and ABF3.
messages: cytosol

3702:AT5G40010
gene id: 3702:AT5G40010
uniprot id: Q9FLD5
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates gradually in the embryo during the seed development to reach high levels in mature seeds, but repressed rapidly in germinating seeds.
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Expressed in seeds, specifically in the embryo.
messages: Induced by abscisic acid (ABA) and abiotic stresses, such as drought, cold, and salt stresses, in an abscisic acid (ABA)- dependent manner.
messages: Mitochondrion membrane
messages: Required to regulate morphology and anatomy during seed maturation.

3702:AT2G36305
gene id: 3702:AT2G36305
uniprot id: A0A1P8B2N0
uniprot id: Q8GW19
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase U48 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in seeds, stems, leaves, flowers and siliques.
messages: Inhibited by L-1-tosylamido-2-phenylethyl chloromethyl ketone (TPCK) and N-ethylmaleimide, but not by EDTA.
messages: Membrane
messages: Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins. The substrate specificity is only partially overlapping with that of FACE1.

3702:AT1G67710
gene id: 3702:AT1G67710
uniprot id: A0A1P8AMW7
uniprot id: A0A1P8AMX5
uniprot id: Q0WRT0
uniprot id: Q9FXD6
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARR family. Type-B subfamily.
messages: Binds the target DNA as a monomer.
messages: Detected in the whole plant. Predominantly expressed in roots and stems.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Transcriptional activator that binds specific DNA sequence.
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity).
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT1G01300
gene id: 3702:AT1G01300
uniprot id: Q9LNJ3
names: Function
names: Similarity
messages: Aspartyl protease. Not able to cleave BAG6.
messages: Belongs to the peptidase A1 family.

3702:AT5G40120
gene id: 3702:AT5G40120
uniprot id: A0A654G726
uniprot id: Q9FL19
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G55240
gene id: 3702:AT5G55240
uniprot id: Q9FLN9
names: Cofactor
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the caleosin family.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group.
messages: Calcium-binding peroxygenase involved in the degradation of storage lipid in oil bodies. May be involved in the interaction between oil bodies and vacuoles during seed germination and in the oxylipin signaling pathways and plant defense responses. Can catalyze sulfoxidation of thiobenzamide, hydroxylation of aniline and epoxidation of oleic acid.
messages: Down-regulated by light and upon germination. Not induced by abscisic acid or osmotic stress.
messages: Expressed in roots, cotyledons, hypocotyls, leaves, shoots, flowers, siliques and dry seeds.
messages: Homodimer.
messages: Lipid droplet
messages: The proline-knot motif (117-126) may be involved in targeting to lipid bodies.
messages: Transmembrane regions are predicted by sequence analysis tools, but these regions probably constitute hydrophobic domains associated to phospholipids.

3702:AT1G24625
gene id: 3702:AT1G24625
uniprot id: Q39266
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development.
messages: Nucleus
messages: Seeds over-expressing ZFP7 are insensitive to inhibition of germination by abscisic acid (ABA).

3702:AT2G14890
gene id: 3702:AT2G14890
uniprot id: Q9C5S0
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Predominantly expressed in flowers and at a lower level in leaves and siliques.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT5G22640
gene id: 3702:AT5G22640
uniprot id: Q8LPR8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in developing embryo.
messages: Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope (PubMed:23372012). Plays an important role during embryogenesis and chloroplast biogenesis (PubMed:20738804).
messages: Part of the Tic complex. Component of the 1-MD complex, composed of TIC20-I, TIC214, TIC100 and TIC56. Interacts with the translocating preproteins. Hydrolysis of ATP is essential for the formation of this complex (PubMed:23372012). The 1-MD complex interacts with TIC21 (By similarity).
messages: Preferentially expressed in ovules, and moderately expressed in leaves and siliques.
messages: Severe defects during embryogenesis, producing abnormal embryos and thereby leading to a lethality of young seedlings.
messages: chloroplast inner membrane

3702:AT4G00050
gene id: 3702:AT4G00050
uniprot id: A0A1P8B876
uniprot id: A0A1P8B885
uniprot id: Q8GZ38
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By cold treatment (PubMed:12679534). Down-regulated by jasmonic acid (MJ) (PubMed:23708772). Accumulates in far-red light more than in darkness and red light; this profile requires COP1-triggered protein degradation in darkness, phyA inhibition of COP1 in far-red light, and phyB-mediated protein degradation in red light (PubMed:31732705). Follows a free-running robust circadian rhythm, with higher levels during the dark (PubMed:23708772).
messages: Expressed transiently in early developing seeds, later present at low levels in maturating seeds until dry seeds (PubMed:23708772). Observed during seed imbibition (PubMed:23708772).
messages: Homodimer (Probable). Associates to PTAC12/HMR/PAP5 which acts as a transcriptional coactivator (PubMed:25944101). Interacts with the Pfr form of phyB but barely with that of phyA (PubMed:31732705). Binds to COP1 (PubMed:31732705).
messages: Mainly expressed in stems, leaves, seedlings, fruits and flowers, and, to a lower extent, in roots.
messages: Nucleus
messages: Plants exhibit unfertilized ovules but normal pollen tube attraction.
messages: Stabilized by phyA but destabilized by phyB (PubMed:31732705). Accumulates in the dark but not in far-red light upon MG132 treatment, a 26S proteasome inhibitor (at protein level) (PubMed:31732705).
messages: Transcription factor binding to G-box elements (5'-CACGTG-3') in target genes promoters, particularly in far-red light but barely in the dark (PubMed:31732705). Required during the fertilization of ovules by pollen (PubMed:15634699). Repressor of phytochrome A-mediated far-red light responses including seed germination, suppression of hypocotyl elongation, and randomization of hypocotyl growth orientation (PubMed:31732705). Does not inhibit phyB-induced red light responses (PubMed:31732705).
messages: Ubiquitinated and subsequently targeted to protein degradation by COP1 in the dark, but not in far-red light.

3702:AT4G14520
gene id: 3702:AT4G14520
uniprot id: A0A178UWW9
uniprot id: Q6NML5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family.
messages: DNA-dependent RNA polymerase which catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Nucleus

3702:AT4G27720
gene id: 3702:AT4G27720
uniprot id: Q9C5R0
names: Function
names: Subcellular Location Annotation
messages: Cell membrane
messages: Mediates high-affinity intracellular uptake of the rare oligo-element molybdenum.
messages: Membrane

3702:AT5G02310
gene id: 3702:AT5G02310
uniprot id: A0A1P8BFH3
uniprot id: F4KCC2
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the UBR1 family.
messages: Reduced seed germination potential and inhibition of seedling establishment by sucrose (PubMed:19255443). Exhibits abnormal shoot and leaf development (PubMed:19620738). Increased tolerance of seedlings to submergence and starvation (PubMed:25667318).
messages: Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
messages: Ubiquitin protein ligase which is a component of the N-end rule pathway with arginine specificity, and functions with the arginyltransferases ATE1 and ATE2. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation (PubMed:17572409, PubMed:19255443, PubMed:19620738, PubMed:22020282). Does not participate in degradation of proteins with N-terminal Phe or Leu (PubMed:17572409). The N-end rule pathway regulates seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination (PubMed:19255443). The N-end rule pathway regulates various aspects of leaf and shoot development (PubMed:19620738). Involved in the ubiquitination and subsequent degradation of RAP2-12, an activator of hypoxic gene expression. The ubiquitination occurs after the N-arginylation of RAP2-12 by ATE1 or ATE2 under aerobic conditions (PubMed:22020282). The end-rule pathway plays a role in regulating the timing and amplitude of the immune response following infection with the bacterial pathogen Pseudomonas syringae pv tomato (PubMed:27173012, PubMed:30117535). Regulates the biosynthesis of plant-defense metabolites such as glucosinolates, and the biosynthesis and response to the phytohormone jasmonate (JA), which plays a key role in plant immunity (PubMed:27173012). Controls the expression of specific defense-response genes, activates the synthesis pathway for the phytoalexin camalexin, and influences basal resistance to the hemibiotroph pathogen Pseudomonas syringae pv tomato (PubMed:30117535). Coordinates the mobilization of seed storage reserves and regulates the abundance and activities of several proteases following seed germination (PubMed:29168982).

3702:AT2G23142
gene id: 3702:AT2G23142
uniprot id: B3H6H8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G70260
gene id: 3702:AT1G70260
uniprot id: A0A654EPE1
uniprot id: F4I5D5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT4G31240
gene id: 3702:AT4G31240
uniprot id: A0A178UWD6
uniprot id: Q8VZQ0
names: Function
names: Similarity
messages: Belongs to the nucleoredoxin family.
messages: Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.

3702:AT5G54390
gene id: 3702:AT5G54390
uniprot id: A0A654GBF0
uniprot id: Q38945
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the inositol monophosphatase superfamily.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP (PubMed:10205895). May regulate the flux of sulfur in the sulfur-activation pathway by converting PAPS to APS (By similarity). Prevents both the toxicity of PAP on RNA processing enzymes as well as the product inhibition by PAP of sulfate conjugation.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Inhibited by Li(+) (IC(50)=10 mM), Na(+) (IC(50)=50 mM) and Ca(2+) (IC(50)=0.06 mM).
messages: Substrate preference is 3'-phosphoadenosine 5'-phosphate (PAP) = adenosine 3'-phosphate 5'-phosphosulfate (PAPS). No activity observed against 3' or 5'-AMP, inositol mono and diphosphates and fructose-1,6-bisphosphate.

3702:AT4G17785
gene id: 3702:AT4G17785
uniprot id: Q8GWP0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G15580
gene id: 3702:AT5G15580
uniprot id: A0A178UF83
uniprot id: Q9LF24
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, petioles, leaf blades and floral organs.
messages: In association with LNG2, regulates leaf morphology by promoting longitudinal polar cell elongation independently of ROT3.
messages: Interacts (via C-terminus) with TON1A and TON1B.
messages: No visible phenotype under normal growth conditions, but the lng1 and lng2 double mutant shows reduced length of cotyledons, rosette leaves, siliques and flowers.
messages: Nucleus
messages: The gain-of-function mutant lng1-1D (T-DNA tagging) shows increased elongation of aerial lateral organs, partly due to elongated cells in leaves, petals and siliques.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G27170
gene id: 3702:AT4G27170
uniprot id: P15460
names: Function
names: Similarity
names: Subunit
messages: Belongs to the 2S seed storage albumins family.
messages: The mature protein consists of a small and a large chain linked by disulfide bonds.
messages: This is a 2S seed storage protein.

3702:AT2G31760
gene id: 3702:AT2G31760
uniprot id: A0A5S9X390
uniprot id: Q9SKC4
names: Cofactor
names: Domain
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT1G15940
gene id: 3702:AT1G15940
uniprot id: A0A178WLC2
uniprot id: Q9S9P0
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PDS5 family.
messages: Cohesin cofactor dispensable during the meiotic division but playing an important role in DNA repair by homologous recombination (HR) probably by helping SMC5/SMC6 complex (PubMed:26648949). Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin (PubMed:26648949). May couple sister chromatid cohesion during mitosis to DNA replication (By similarity). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (PubMed:26648949).
messages: Interacts with the cohesin complex.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Weak impact on meiosis such as formation of some chromosome bridges at late anaphase I and telophase I in forming pollen, but severe effects on development, fertility, somatic homologous recombination (HR) and DNA repair, especially in plants lacking PDS5A, PDS5B, PDS5C, PDS5D and PDS5E.

3702:AT3G13540
gene id: 3702:AT3G13540
uniprot id: Q38850
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts with BHLH002/EGL3/MYC146, BHLH012/MYC1 and BHLH042/TT8.
messages: Nucleus
messages: Siliques.
messages: Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1 or BHLH042/TT8.

3702:AT4G14145
gene id: 3702:AT4G14145
uniprot id: A0JPW4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COX16 family.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT5G39600
gene id: 3702:AT5G39600
uniprot id: A0A178UNV2
uniprot id: Q940G3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mL53 family.
messages: Mitochondrion

3702:AT3G18310
gene id: 3702:AT3G18310
uniprot id: A0A384LM95
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G51170
gene id: 3702:AT1G51170
uniprot id: A0A178WK47
uniprot id: Q9SYB9
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Cytoplasm
messages: Ectopic growth in filaments and petals, distortion of integument planar growth and aberrant embryogenesis and partial lethality in ucn-1 embryos. The double mutants ucn-2 and ucnl-5 are embryonic lethal.
messages: Expressed in the epidermis and cortex of the transition zone of the root apex and developing flowers. Expressed in rosette leaves, stems and siliques.
messages: Nucleus
messages: Regulates planar ovule integument development by suppressing aberrantly oriented growth. Maintains planar growth of integuments by repressing the developmental regulator and transcription factor KAN4 which is involved in the control of early integument growth and polarity. Restricts growth in stamen filaments, petals, and cotyledons.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G37740
gene id: 3702:AT5G37740
uniprot id: A0A178UGX2
uniprot id: F4K8L6
uniprot id: Q9FHP6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant CAR protein family.
messages: Cell membrane
messages: Dimers and oligomers (By similarity). Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus. Interacts directly with PYR1, PYL1, PYL4, PYL6 and PYL8. Binds phospholipids in a Ca(2+)-dependent manner.
messages: Expressed in roots.
messages: Membrane
messages: Nucleus
messages: Predominantly expressed in the vascular bundle of the primary root and in the cortex of the root upper part. In lateral roots, detected in epidermis and root tips.
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (PubMed:25465408). Binds liposomes in the absence of exogenous Ca(2+), but this activity is enhanced in the presence of Ca(2+) and generates membrane curvature (By similarity).
messages: When associated with disruption in CAR4, CAR5 and CAR9 genes, reduced sensitivity to abscisic acid (ABA) during seedling establishment and root growth regulation.

3702:AT4G08350
gene id: 3702:AT4G08350
uniprot id: A0A178UTQ8
uniprot id: Q9STN3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SPT5 family.
messages: May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (By similarity).
messages: Nucleus

3702:AT1G53023
gene id: 3702:AT1G53023
uniprot id: F4HPP7
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT1G49590
gene id: 3702:AT1G49590
uniprot id: A0A178W615
uniprot id: Q7XA66
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cajal body
messages: Component of a pre-mRNA splicing complex. Interacts with STA1. Interacts with PRP31 (PubMed:25684655).
messages: Nucleic acid-binding protein that promotes Pol IV-dependent small interfering RNA (siRNA) accumulation, DNA methylation and transcriptional silencing. May possess both RNA-directed DNA methylation (RdDM)-dependent and -independent roles in transcriptional silencing. Acts as a pre-mRNA splicing factor that associates with several typical components of the splicing machinery as well as with Pol II.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G21175
gene id: 3702:AT3G21175
uniprot id: B3H4L8
uniprot id: Q8GXL7
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the type IV zinc-finger family. Class C subfamily.
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: Predominantly expressed in shoot apices, inflorescences and roots.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

3702:AT2G01450
gene id: 3702:AT2G01450
uniprot id: A0A654EW24
uniprot id: Q0WRN5
uniprot id: Q84M93
names: Activity Regulation
names: Domain
names: PTM
names: Similarity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-178 and Tyr-180, which activates the enzyme.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT5G19110
gene id: 3702:AT5G19110
uniprot id: A0A1P8BDM1
uniprot id: F4JZM1
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT5G43560
gene id: 3702:AT5G43560
uniprot id: Q8RY18
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Functions redundantly with TRAF1B in the regulation of plant immune response. Contributes to the turnover of the nucleotide-binding domain and leucine-rich repeat-containing (NB-LRR) immune receptors SNC1 and RPS2. May associate with an E3 ubiquitin-protein ligase complex, which modulates ubiquitination and subsequent degradation of NB-LRR immune sensors to maintain their homeostasis (PubMed:26867179). Functions redundantly with TRAF1B in the regulation of autophagosome formation. Required for SINAT1- and SINAT2-mediated ubiquitination and destabilization of ATG6. Functions as molecular adapter that helps to regulate autophagy by modulating ATG6 stability (PubMed:28351989).
messages: Interacts with AHK3 (PubMed:18642946). Interacts with ATG6, SINAT1, SINAT2, SINAT5 and SINAT6 (PubMed:28351989).
messages: No visible phenotype under normal growth conditions, but the double mutant plants traf1a and traf1b, or muse13 and muse14 are extremely dwarf when grown at room temperature.

3702:AT1G35460
gene id: 3702:AT1G35460
uniprot id: A0A178WC48
uniprot id: A0A1P8AV82
uniprot id: Q9C8P8
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT2G20570
gene id: 3702:AT2G20570
uniprot id: A0A1P8B320
uniprot id: F4IVF9
uniprot id: Q9SIV3
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By light. Repressed by BZR2.
messages: Expressed in rosette and cauline leaves. Expressed at low levels in cotyledons and shoots.
messages: Interacts with NAC92.
messages: No visible phenotype (PubMed:12220263). Pale-green seedlings in double mutants glk1/glk2 (PubMed:23459204).
messages: Nucleus
messages: Plants overexpressing GLK1 have a delay in flowering under long days, show high constitutive expression of genes encoding disease defense related proteins and are resistant to the pathogen F.graminearum.
messages: Transcriptional activator that functions with GLK2 to promote chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. Acts in a cell-autonomous manner to coordinate and maintain the photosynthetic apparatus within individual cells. May function in photosynthetic capacity optimization by integrating responses to variable environmental and endogenous cues (PubMed:11828027, PubMed:12220263, PubMed:17533111, PubMed:18643989, PubMed:19376934, PubMed:19383092, PubMed:19726569). Prevents premature senescence (PubMed:23459204).

3702:AT2G47940
gene id: 3702:AT2G47940
uniprot id: A0A178VUR8
uniprot id: B3H581
uniprot id: O82261
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S1C family.
messages: By high salt, desiccation and light stresses (at protein level).
messages: Serine protease that performs the primary cleavage of the photodamaged D1 protein in plant photosystem II.
messages: chloroplast thylakoid membrane

3702:AT5G09300
gene id: 3702:AT5G09300
uniprot id: Q84JL2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BCKDHA family.
messages: Bound potassium ions stabilize the protein structure.
messages: Heterotetramer of alpha and beta chains.
messages: Mitochondrion matrix
messages: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).

3702:AT1G13030
gene id: 3702:AT1G13030
uniprot id: Q8RWK8
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the coilin family.
messages: Cajal body
messages: Contains a N-terminal ordered domain (NOD) (1-117), central internal disordered domain (IDD) (118-349) and a C-terminal domain (CTD) (350-608) with an atypical Tudor domain containing probably two large unstructured loops.
messages: Homooligomer. Interaction with RNA results in multimerization due to structural alteration in the NOD domain.
messages: No visible phenotype, but loss of Cajal bodies.
messages: Nucleus
messages: Probable component of nuclear coiled bodies, also known as Cajal bodies or CBs, which are involved in the modification and assembly of nucleoplasmic snRNPs (Probable). Required for CBs formation (PubMed:16624863). Binds snRNAs and non-specific artificial RNA via the N-terminal part of the NOD domain and via the NLS2 region (212-282) of the IDD domain (PubMed:23320094). The two sites are able to function independently and provide effective RNA-binding in a non-cooperative manner (PubMed:23320094).

3702:AT3G19450
gene id: 3702:AT3G19450
uniprot id: A0A178VK12
uniprot id: P48523
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed at the lateral root initiation sites, in the vascular tissues of the primary lateral root and the root caps. Expressed in the hypocotyl, cotyledon and leaf veins, apical meristem region, hydathodes, at the base of the trichomes and cauline leaves. In stems, expressed in the cells associated with the vascular cambium, interfascicular cambium and the developing xylem. Expressed in the vascular strand of petals and sepals, anthers, stamen filaments, stigma with papillary cells in flowers, and abscission, style and stigmatic regions of siliques.
messages: Homodimer.
messages: Involved in lignin biosynthesis in the floral stem. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.
messages: Reduced lignin content and rigidity of the floral stems.

3702:AT1G22640
gene id: 3702:AT1G22640
uniprot id: Q9S9K9
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By nitrogen, salicylic acid, NaCl and abscisic acid (ABA).
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Interacts with CPL1.
messages: Nucleus

3702:AT3G17450
gene id: 3702:AT3G17450
uniprot id: A0A654F954
uniprot id: Q0WQA4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G41000
gene id: 3702:AT2G41000
uniprot id: Q0WTI8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaJ family. C/III subfamily.
messages: Membrane
messages: Plays a continuous role in plant development probably in the structural organization of compartments.
messages: Was originally erroneously termed LCR51 before the split of the gene model.

3702:AT1G14840
gene id: 3702:AT1G14840
uniprot id: A0A178W5G7
uniprot id: F4HXV4
uniprot id: Q9LQU7
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MAP70 family.
messages: Plant-specific protein that interact with microtubules.
messages: Sequencing errors.
messages: cytoskeleton

3702:AT5G47800
gene id: 3702:AT5G47800
uniprot id: A0A1P8B9X9
uniprot id: Q9FIK1
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT4G06746
gene id: 3702:AT4G06746
uniprot id: A0A5S9XS20
uniprot id: Q8W3M3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G16090
gene id: 3702:AT2G16090
uniprot id: A0A1P8AYL6
uniprot id: A0A1P8AYL7
uniprot id: A0A1P8AYS1
uniprot id: A0A1P8AYS5
uniprot id: A0A5S9WYM2
uniprot id: Q84RR2
names: Caution
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: Lacks the His residue in the RING-type domain 2 that is one of the conserved features of the family.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.
messages: Ubiquitous.

3702:AT4G29580
gene id: 3702:AT4G29580
uniprot id: A0A5S9XX02
uniprot id: F4JNN8
uniprot id: Q9S789
names: Caution
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Binds 1 zinc ion.
messages: Homodimer.
messages: Lacks the conserved Glu active site which is replaced by Gly. Its enzyme activity is therefore unsure.

3702:AT5G03660
gene id: 3702:AT5G03660
uniprot id: A0A178UAK5
uniprot id: A0A1P8BDB2
uniprot id: F4KGP6
uniprot id: Q940P0
names: Similarity
messages: Belongs to the GORAB family.

3702:AT5G41070
gene id: 3702:AT5G41070
uniprot id: Q8GY79
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Binds double-stranded RNA. May be involved in RNA-mediated silencing.
messages: Expressed in the shoot apical meristem (SAM).
messages: Heterodimer with DRB1, DRB2 or DRB4. Interacts with DCL1 and DCL3.
messages: No visible phenotype.

3702:AT4G37840
gene id: 3702:AT4G37840
uniprot id: A0A654FWG6
uniprot id: Q9T071
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the hexokinase family.
messages: Fructose and glucose phosphorylating enzyme.
messages: Membrane

3702:AT3G54900
gene id: 3702:AT3G54900
uniprot id: A0A654FH53
uniprot id: Q84Y95
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutaredoxin family. CGFS subfamily.
messages: By sodium and magnesium chloride.
messages: Highly expressed in leaves, at intermediate levels in stems and at lower levels in roots and flowers.
messages: May only reduce GSH-thiol disulfides, but not protein disulfides (Potential). Probably involved in the regulation of the redox state of the BOLA proteins (Potential). May act as Fe-S cluster donors to Fe-S cluster-requiring proteins (PubMed:18044966). May protect cells against protein oxidative damage (PubMed:16829529). May regulate CAX cation transporters (PubMed:16829529). The GRXS14-BOLA1 heterodimer binds a labile, oxygen sensitive Fe-S cluster (PubMed:24714563).
messages: Plants display high sensitivity to external oxidants, and their content of protein carbonylation is higher than wild-type plants.
messages: The C-terminal region (79-168) is involved in BOLA recognition in GRXS-BOLA apo-heterodimer.
messages: The GRXS14-BOLA1 apo-heterodimer model derived from NMR data shows a domain arrangement totally different from the holo-heterodimer showing evidence for a Rieske-type ligation of a [2Fe-2S] cluster.
messages: [2Fe-2S]-bridged holo-homodimer (By similarity). Interacts with N-terminal part of CAX1 in yeast (PubMed:12480930). Interacts in vitro with SUFE1, BOLA1, BOLA2 and BOLA4 (PubMed:24203231). Interacts in vivo only with SUFE1, BOLA1 and BOLA4 (PubMed:24203231, PubMed:24714563, PubMed:12480930) (By similarity). Interacts with SBP1 (PubMed:30824043).
messages: chloroplast

3702:AT5G39110
gene id: 3702:AT5G39110
uniprot id: A0A654G6B1
uniprot id: Q9FID0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT2G04900
gene id: 3702:AT2G04900
uniprot id: A0A654ERZ2
uniprot id: B3H468
uniprot id: Q9SI36
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G02570
gene id: 3702:AT3G02570
uniprot id: A0A178VN24
uniprot id: Q9M884
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the mannose-6-phosphate isomerase type 1 family.
messages: Binds 1 zinc ion per subunit.
messages: By light (at the protein level). Down-regulated by dark (at the protein level). Down-regulated by DCMU, an exogenous photosynthesis inhibitor.
messages: Constitutively expressed in both vegetative and reproductive organs under normal growth conditions (at protein level).
messages: Endosperm development arrested.
messages: Inhibited by EDTA, Zn(2+), Cd(2+), Co(2+), p-chloromercuribenzoate and L-ascorbic acid (AsA).
messages: Phosphomannose isomerase involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions. Involved in the ascorbic acid (AsA) biosynthesis. Required during the endosperm development.

3702:AT1G17340
gene id: 3702:AT1G17340
uniprot id: A0A5S9UWA0
uniprot id: Q8RW97
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).
messages: The phosphatase catalytic core motif (or RXNCXDCLDRTN motif) from the SAC domain is found in metal-independent protein phosphatases and inositol polyphosphate phosphatases.
messages: Ubiquitous with a higher level of expression in young seedlings than in other tissues.
messages: Vacuole membrane

3702:AT3G16080
gene id: 3702:AT3G16080
uniprot id: A0A1I9LRU8
uniprot id: A0A384LAJ1
uniprot id: Q0WW79
uniprot id: Q8LEM8
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL37 family.
messages: Binds 1 zinc ion per subunit.
messages: Binds to the 23S rRNA.
messages: Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.

3702:AT5G20730
gene id: 3702:AT5G20730
uniprot id: F4K5M5
uniprot id: P93022
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Acts as a transcriptional activator of several tropic stimulus-induced (TSI) genes, including SAUR50. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Required for differential growth responses of aerial tissues. Involved in ethylene responses. Regulates lateral root formation through direct regulation of LBD16 and/or LBD29 (PubMed:29184030). Functionally redundant with ARF19 (PubMed:29184030). Mediates embryo axis formation and vascular tissues differentiation. Functionally redundant with ARF5. Involved in cellular dedifferentiation during callus formation on callus-inducing medium (CIM) and in an ATXR2-dependent manner (PubMed:29184030).
messages: Belongs to the ARF family.
messages: Expressed in the whole plant.
messages: Homodimers and heterodimers (PubMed:10476078, PubMed:21734647). Interacts with the auxin-responsive proteins IAA1 and IAA12 (BODENLOS)(PubMed:14973283, PubMed:21734647). Interacts (via PB1 domain) with IAA17 (via PB1 domain) (PubMed:24706860, PubMed:21734647). Interacts with IAA19 (PubMed:14729917, PubMed:21734647). Interacts with ARF5 (PubMed:17259263, PubMed:21734647). Binds to JMJ30 (PubMed:29923261). Binds to ATXR2 in the nucleus (PubMed:29184030).
messages: Homodimers and heterodimers.
messages: Incomplete sequence. May be due to exon skipping.
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: The PB1 domain provides both positive and negative electrostatic interfaces for directional protein interaction.
messages: The arf7-1 arf19-2 double mutant is defective in callus formation.

3702:AT2G36580
gene id: 3702:AT2G36580
uniprot id: A0A178VX82
uniprot id: Q9SJQ0
names: Similarity
messages: Belongs to the pyruvate kinase family.

3702:AT5G42780
gene id: 3702:AT5G42780
uniprot id: Q9FMY7
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Homo- and heterodimer with other ZFHD proteins (By similarity). Interacts with MIF1, MIF2 and MIF3; these interactions prevent nuclear localization and DNA-binding to inhibit transcription regulation activity. Binds to ZHD11.
messages: Mostly expressed in flowers.
messages: Nucleus
messages: Putative transcription factor.
messages: The homeodomain differs form the typical one by having namely 4 instead of 3 extra amino acids inserted in the loop between helix 1 and helix 2.

3702:AT1G05720
gene id: 3702:AT1G05720
uniprot id: A0A178W3Q1
uniprot id: Q8GWP6
names: Caution
names: Similarity
messages: Belongs to the selenoprotein M/F family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G14040
gene id: 3702:AT4G14040
uniprot id: A0A5S9XSD2
uniprot id: Q93WN0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the selenium-binding protein family.
messages: Impaired fusion of polar nuclei.
messages: Mostly expressed in seedlings, leaves and stems, and, to a lower extent, in flowers and roots.
messages: Required for the fusion of female gametophyte polar nuclei.
messages: Slightly induced in roots by cadmium.

3702:AT3G50360
gene id: 3702:AT3G50360
uniprot id: O82659
names: Caution
names: Function
names: Induction
names: Subunit
messages: Although assigned as a calmodulin family member by Ref.6, it only contains EF-hand domains.
messages: By wounding and infection by the bacterial pathogens X.campestris and P.syringae.
messages: Interacts with TON1A and TON1B (PubMed:18757558). Interacts with SAC3A and SAC3B (PubMed:19843313). Interacts with UCH1 and UCH2 (PubMed:22951400).
messages: Potential calcium sensor.

3702:AT2G25000
gene id: 3702:AT2G25000
uniprot id: A0A1P8B2R2
uniprot id: A0A1P8B2U6
uniprot id: A0A654F0W8
uniprot id: Q0WSE5
uniprot id: Q9SK33
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT3G01050
gene id: 3702:AT3G01050
uniprot id: A0A178VKW0
uniprot id: Q9MAB9
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: Cell membrane
messages: Heat stable and remains soluble at temperatures exceeding 90 degrees Celsius.
messages: May serve as docking site to facilitate the association of other proteins to the plasma membrane.
messages: Membrane

3702:AT3G61140
gene id: 3702:AT3G61140
uniprot id: P45432
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CSN1 family.
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of IAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. In the complex, it plays a central role in CSN assembly.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8. Interacts with itself and (via PCI domain) with CSN7 (via PCI domain). In the CSN complex, it probably interacts directly with CSN2, CSN3, CSN4 and CSN5B. Interacts with the 26S proteasome subunit RPN6. Interacts (via N-terminal domain) with TSA1 (via C-terminal domain). Binds to the translation initiation factors TIF3C1, TIF3E1 and TIF3H1 (PubMed:9849901, PubMed:19704582, PubMed:15548739).
messages: Cytoplasm
messages: Expressed in leaves, flowers, immature siliques, and light-grown roots.
messages: Nucleus
messages: The N-terminal part (1-211), which is not required for deneddylating activity and CSN complex formation, is nevertheless essential for other aspects of CSN complex function.
messages: The PCI domain is necessary and sufficient for the interactions with other CSN subunits of the complex.

3702:AT3G54100
gene id: 3702:AT3G54100
uniprot id: A0A654FFM2
uniprot id: Q9M393
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT5G13130
gene id: 3702:AT5G13130
uniprot id: A0A178UK03
uniprot id: F4K2G3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MORC ATPase protein family.
messages: Exhibits ATPase activity. Binds DNA/RNA in a non-specific manner and exhibits endonuclease activity. Probably involved in DNA repair. Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing. May also be involved in the regulation of chromatin architecture to maintain gene silencing.
messages: Homodimer and heterodimer. Component of an RNA-directed DNA methylation (RdDM) complex.
messages: Nucleus

3702:AT1G26470
gene id: 3702:AT1G26470
uniprot id: A0A178W650
uniprot id: Q9FZD2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EAF7 family.
messages: Nucleus

3702:AT2G01880
gene id: 3702:AT2G01880
uniprot id: Q8S341
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Secreted

3702:AT5G52910
gene id: 3702:AT5G52910
uniprot id: A0A1P8B9S9
uniprot id: Q9FLX0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G47640
gene id: 3702:AT2G47640
uniprot id: A0A384KAB2
uniprot id: A0A384LL34
uniprot id: O22247
uniprot id: Q8RUH0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP core protein family.
messages: Nucleus
messages: cytosol

3702:AT4G20235
gene id: 3702:AT4G20235
uniprot id: P58047
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT2G19760
gene id: 3702:AT2G19760
uniprot id: A0A5S9WZP5
uniprot id: Q42449
names: Allergen
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the profilin family.
messages: Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
messages: Binds to actin monomers and regulates the organization of the actin cytoskeleton (PubMed:26574597). At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (PubMed:29861135). At low concentrations, associates with the poly-proline motif of formins to enhance actin filament elongation rate (PubMed:29861135). Binds ACT1, ACT7 and ACT11 and inhibits actin polymerization (PubMed:26578694). Coordinates the stochastic dynamic properties of actin filaments by modulating formin-mediated actin nucleation and assembly during axial cell expansion (PubMed:26574597). Binds G-actin and poly-L-proline in vitro (PubMed:19200149). Inhibits cell growth of various pathogenic fungal strains (PubMed:30056100). May play a role as antifungal proteins in the defense system against fungal pathogen attacks (PubMed:30056100).
messages: Causes an allergic reaction in human.
messages: Cytoplasm
messages: Delayed germination (PubMed:11340190). In young seedlings, excessive numbers of root hairs, abnormal raised cotyledons, elongated hypocotyls, and elongated cells in the hypocotyl (PubMed:11340190, PubMed:26574597). Defects in rosette leaf and inflorescence development (PubMed:26160044).
messages: Down-regulated by light.
messages: Expressed at low levels roots, leaves, stems, flowers and siliques (PubMed:8771785, PubMed:8685262). Expressed in leaf epidermal cells, trichomes and stem epidermal cells (PubMed:19200149). Detected in phloem exudates (at protein level) (PubMed:30056100).
messages: Occurs in many kinds of cells as a complex with monomeric actin in a 1:1 ratio.
messages: cytoskeleton

3702:AT3G02690
gene id: 3702:AT3G02690
uniprot id: A0A654F3H3
uniprot id: Q93V85
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: chloroplast membrane

3702:AT1G29750
gene id: 3702:AT1G29750
uniprot id: Q9FXF2
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: First detected in early flower primordia and during stamen development. Later expressed in anthers and in pollen.
messages: Membrane
messages: Mostly expressed in flower buds, especially in stamens.

3702:AT3G10410
gene id: 3702:AT3G10410
uniprot id: A0A178VKH6
uniprot id: P32826
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in roots, senescent leaves and flowers.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT3G11020
gene id: 3702:AT3G11020
uniprot id: M4VR86
uniprot id: O82133
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By high-salt and drought stresses.
messages: Expressed preferentially in roots and stems, and at a lower level in leaves.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.

3702:AT1G57943
gene id: 3702:AT1G57943
uniprot id: Q1PFJ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT1G07000
gene id: 3702:AT1G07000
uniprot id: A0A178WCB5
uniprot id: Q9LMJ4
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the EXO70 family.
messages: Component of an exocyst subcomplex specifically involved in autophagy-related, Golgi-independent membrane traffic to the vacuole. Regulates autophagosome formation and autophagy-related Golgi-independent import into the vacuole (By similarity). Positive regulator of defense responses to pathogenic bacteria (e.g. P.syringae pv. maculicola), to the biotrophic oomycete H.arabidopsidis and to fungi (e.g. B.graminis hordei), especially in cell wall apposition formation related to plant defense (PubMed:21199889, PubMed:23170036). Required for both immediate and later responses triggered by pathogen-associated molecular patterns (PAMPs) (PubMed:23170036). Positive regulator of abscisic acid (ABA)-independent mannitol (drought)-promoted stomatal closure (PubMed:27956469).
messages: Component of the exocyst complex.
messages: Cytoplasm
messages: Induced by elicitor peptides elf18 and flg22, by the fungus B.graminis hordei and by the bacterium P.syringae.
messages: Mostly expressed in leaves and, to a lower extent, in roots, cotyledons, internodes, flower buds, siliques and anthers.
messages: No discernible phenotype in normal conditions (PubMed:16942608, PubMed:21199889, PubMed:27956469). Altered mannitol (drought)-promoted stomatal closure (PubMed:27956469). Enhanced susceptibility to the bacterial pathogen P.syringae pv. maculicola and abnormal papilla formation, with an unusual wide halo made of vesicle-like structures upon inoculation by the fungal pathogen B.graminis hordei (PubMed:21199889). Reduced sensitivity to pathogen-associated molecular patterns (PAMPs) (e.g. bacterial elicitor flg22, bacterial transcription factor elf18, Pep1 and fungal chitin) leading to a reduced production of reactive oxygen species (ROS) and impaired induction of several plant defense genes. Increased disease susceptibility to the biotrophic oomycete H.arabidopsidis (PubMed:23170036).
messages: Nucleus
messages: Self interacts (PubMed:21199889). Interacts with EXO70B1 (PubMed:23944713). Interacts with the exocyst subunits EXO70H1, SEC5A and SEC15B. Binds to SNAP33 (PubMed:21199889). Subunit of the exocyst complex that mediates vesicle tethering during exocytosis (Probable). Binds to PUB22 (PubMed:23170036).
messages: Target of the E3 ubiquitin-protein ligase PUB22 that mediates its ubiquitination and degradation via the 26S proteasome to attenuate pathogen-associated molecular patterns (PAMP)-induced signaling, especially is response to the bacterial elicitor flg22.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: phagosome

3702:AT5G14400
gene id: 3702:AT5G14400
uniprot id: A0A1P8BDE6
uniprot id: A0A1P8BDE8
uniprot id: A0A5S9Y4W7
uniprot id: F4K6S3
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G06850
gene id: 3702:AT3G06850
uniprot id: A0A654F6G8
uniprot id: Q9M7Z1
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Barely detected in non senescent green leaves, accumulated slightly at the early stage of leaf senescence and strongly expressed at the late stage of leaf senescence.
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: By dark treatment (at the protein level). Induced by the calmodulin antagonists trifluoperazine and fluphenazine in darkness. Down-regulated by sucrose in a hexokinase dependent manner (at protein level). Up-regulated by Leucine and its derivative alpha-keto acid (KIC).
messages: Expressed in the non-photosynthetic organs such as siliques, flowers and roots.
messages: Forms a 24-polypeptide structural core with octahedral symmetry.
messages: Mitochondrion matrix
messages: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). Within this complex, the catalytic function of this enzyme is to accept, and to transfer to coenzyme A, acyl groups that are generated by the branched-chain alpha-keto acid decarboxylase component (By similarity). Required during sugar starvation and acts under the control of a sugar-sensing mechanism involving Ser/Thr kinases and phosphatases.

3702:AT2G22930
gene id: 3702:AT2G22930
uniprot id: O81010
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT5G52720
gene id: 3702:AT5G52720
uniprot id: F4KHL6
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Contains an apparent HMA-like domain but lacks the core conserved Cys-X-X-Cys motif.
messages: Probable heavy-metal-binding protein.

3702:AT1G33830
gene id: 3702:AT1G33830
uniprot id: Q9C8U2
names: Developmental Stage
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. IAN subfamily.
messages: Expressed at the early flowering stage and at the late stage of silique development.
messages: Mostly expressed in pollen.
messages: Up-regulated by brassinolides. Down-regulated by 2-aminoethoxyvinylglycine (AVG), high CO(2), isoxaben, and propiconazole treatments.

3702:AT5G05900
gene id: 3702:AT5G05900
uniprot id: Q9FI96
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT3G05030
gene id: 3702:AT3G05030
uniprot id: A0A178VK10
uniprot id: A0A384LNZ4
uniprot id: Q56XP4
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity. Involved in vacuolar ion compartmentalization necessary for cell volume regulation and cytoplasmic Na(+) detoxification.
messages: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
messages: Expressed in roots and shoots.
messages: Induced by abscisic acid (ABA), and by NaCl and sorbitol in a ABA-dependent manner.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuole membrane

3702:AT2G44480
gene id: 3702:AT2G44480
uniprot id: A0A1P8B0I8
uniprot id: A0A1P8B0I9
uniprot id: A0A1P8B0J0
uniprot id: O64882
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT5G01920
gene id: 3702:AT5G01920
uniprot id: Q9LZV4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Light-dependent serine/threonine protein kinase that specifically phosphorylates N-terminal threonine residues in psbA/D1, psbD/D2, psbC/CP43 and psbH, which are components of the core antenna complex of photosystem II. Phosphorylation of PSII core components facilitates the exchange of chlorophyll proteins between the grana and the stroma lamellae. Also involved in the phosphorylation of the calcium-sensing receptor (CaS).
messages: Not significantly affected in state transitions. Enhanced thylakoid folding and reduced mobility of thylakoid proteins under low-light conditions.
messages: chloroplast thylakoid

3702:AT5G55130
gene id: 3702:AT5G55130
uniprot id: A0A5S9YE65
uniprot id: Q9ZNW0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: In the N-terminal section; belongs to the HesA/MoeB/ThiF family. UBA4 subfamily.
messages: Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards URM1 and MOCS2A. Subsequently, a transient disulfide bond is formed. Does not use thiosulfate as sulfur donor; NFS1 probably acting as a sulfur donor for thiocarboxylation reactions.

3702:AT1G08880
gene id: 3702:AT1G08880
uniprot id: A0A178W8H7
uniprot id: O04848
names: Caution
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Expressed mainly in roots.
messages: Nucleus
messages: Phosphorylated to form H2AXS139ph (gamma-H2AX) in response to DNA double strand breaks (DSBs) generated by exogenous genotoxic agents and by stalled replication forks, and may also occur during meiotic recombination events. Phosphorylation can extend up to several thousand nucleosomes from the actual site of the DSB and may mark the surrounding chromatin for recruitment of proteins required for DNA damage signaling and repair. Widespread phosphorylation may also serve to amplify the damage signal or aid repair of persistent lesions. H2AXS139ph in response to ionizing radiation is mediated by ATM while defects in DNA replication induce H2AXS139ph subsequent to activation of ATR. Dephosphorylation of H2AXS139ph by PP2A is required for DNA DSB repair (By similarity).
messages: The [ST]-Q motif constitutes a recognition sequence for kinases from the PI3/PI4-kinase family.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. Interacts with numerous proteins required for DNA damage signaling and repair when phosphorylated on Ser-139 (By similarity).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2AXS139ph = phosphorylated Ser-139.
messages: Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Required for checkpoint-mediated arrest of cell cycle progression in response to low doses of ionizing radiation and for efficient repair of DNA double strand breaks (DSBs) specifically when modified by C-terminal phosphorylation (By similarity).

3702:AT4G28730
gene id: 3702:AT4G28730
uniprot id: A0A178UXL4
uniprot id: Q8GWS0
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glutaredoxin family. CPYC subfamily.
messages: Glutathionylated.
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. Can assemble a [2Fe-2S] cluster, but cannot transfer it to an apoferredoxin.
messages: Monomeric apoprotein and homodimeric holoprotein containing a [2Fe-2S] cluster (PubMed:21632542). No in vitro interactions with SUFE1, BOLA1, BOLA2 or BOLA4 (PubMed:24203231).
messages: Up-regulated by cold treatment.
messages: chloroplast

3702:AT5G66210
gene id: 3702:AT5G66210
uniprot id: A0A1P8BD52
uniprot id: B9DGD0
uniprot id: Q9FKW4
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by calcium (PubMed:23252373). Autophosphorylation plays an important role in the regulation of the kinase activity (PubMed:23252373).
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Cell membrane
messages: Expressed in vascular and meristematic tissues throughout plant development.
messages: Interacts with BIK1.
messages: May be due to an intron retention.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger (Probable). Acts as developmentally controlled regulator for coordinated stem elongation and vascular development. Acts as key component which contributes to the developmental switch that establishes the transition from vegetative to reproductive growth (PubMed:23252373). Involved in pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) signaling. Interacts with and phosphorylates the kinase BIK1, a central rate-limiting kinase in PTI signaling. Facilitates BIK1 turnover and negatively regulates BIK1-mediated immune responses triggered by several PAMPs. Its kinase activity is necessary and sufficient for its function in PTI signaling (PubMed:25525792).
messages: Severe growth defect in shoot elongation. Severe growth defect of flowering stem.
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (328-358) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT1G27860
gene id: 3702:AT1G27860
uniprot id: Q9C6N2
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.

3702:AT2G41010
gene id: 3702:AT2G41010
uniprot id: O80683
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By cold, salt stress and dehydration.
messages: Calmodulin-binding protein that functions as a negative regulator of osmotic stress tolerance.
messages: Expressed in leaves, flowers and siliques.
messages: Interacts with calmodulin (CaM) (PubMed:15086802). Interacts with WRKY25 and WRKY51 (PubMed:22535423).
messages: Nucleus

3702:AT1G04550
gene id: 3702:AT1G04550
uniprot id: F4I5P9
uniprot id: Q38830
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers.
messages: Homodimers and heterodimers. Interacts with the auxin response factor ARF5. Interacts (via domain I) with TPL (via the LisH domain).
messages: Nucleus
messages: Preferentially expressed in stems, leaves and flowers.
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:ArthCp041
gene id: 3702:ArthCp041
uniprot id: A0A1B1W4W3
uniprot id: P56775
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetG family.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

3702:AT5G53380
gene id: 3702:AT5G53380
uniprot id: Q9FK04
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Induced in roots during drought and salt stresses.
messages: Mostly expressed in roots.

3702:AT4G34430
gene id: 3702:AT4G34430
uniprot id: Q8VY05
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of a multiprotein complex equivalent of the SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors.
messages: Interacts with SWI3B, but not with BSH. Component of a RNA-directed DNA methylation (RdDM) complex that contains at least MORC6, MORC1/CRT1, MORC2, SWI3D and SUVH9 (PubMed:24465213). Interacts with MORC6 and SUVH9 (PubMed:27171427).
messages: Nucleus
messages: Plants are viable but have alterations in leaf, root and flower development, and are early flowering.
messages: Ubiquitously expressed.
messages: Was originally incorrectly assigned as CHB4.

3702:AT5G22890
gene id: 3702:AT5G22890
uniprot id: Q0WT24
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed at low levels in roots (e.g. root tips and lateral roots), leaves (e.g. at the edge of mature leaves, possibly in hydathodes, and in vascular bundles), flowers (e.g. floral filaments), stems, siliques and cotyledons.
messages: Nucleus
messages: Probable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

3702:AT3G28340
gene id: 3702:AT3G28340
uniprot id: Q9LHD2
uniprot id: W8QNM3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: By methylviologen (MV), a superoxide radical generating drug.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.

3702:AT5G52990
gene id: 3702:AT5G52990
uniprot id: Q9LVV3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the synaptobrevin family.
messages: Membrane
messages: Non-SNARE longin protein involved in membrane-trafficking machinery.

3702:AT3G27400
gene id: 3702:AT3G27400
uniprot id: A0A1I9LNU6
uniprot id: Q9LTZ0
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT4G07410
gene id: 3702:AT4G07410
uniprot id: Q8RXU6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: During early phases of embryogenesis, expressed in all the cells of the embryo proper and the suspensor until the 32-cell embryo stage. At the heart stage, expression completely disappears in the suspensor, but remains in the embryo proper. After germination, expressed in shoot apical meristem (SAM), leaf primordia, root apical meristem (RAM), and lateral root primordia.
messages: Involved in auxin signaling pathway. Required for embryo development and meristem organization. Functions in the auxin pathway, integrating auxin signaling in the organization and maintenance of the shoot apical meristem (SAM) and root apical meristem (RAM).
messages: Nucleus
messages: Temperature-sensitive phenotype. Defective in embryo development and embryo lethality when grown at 22 degrees Celsius. Embryo lethality phenotype rescued when grown at 29 degrees Celsius. Germination of temperature-rescued pcn mutant seeds give plants with small and narrow-shaped leaves, abnormal leaf vein patterns, altered flowering organs and defects in the root apical meristem (RAM).

3702:AT5G41990
gene id: 3702:AT5G41990
uniprot id: Q944Q0
names: Caution
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.
messages: Interacts with RGS1 and GB1, but not with GPA1. The association with RGS1 at the plasma membrane is triggered by induction of glucose (PubMed:21952135, PubMed:22940907). Binds to EDM2 in nucleus (PubMed:20149132).
messages: Nucleus
messages: Plants display early flowering and altered expression of genes involved in the photoperiod flowering pathway, such as ELF4, TOC1, CO and FT.
messages: Regulates flowering time by modulating the photoperiod pathway. Phosphorylates the vacuolar ATPase subunit C (VATC) and RGS1 (PubMed:16427632, PubMed:18761494). Regulates EDM2 that, in turn, modulates development processes (PubMed:20840782, PubMed:20149132).
messages: Was named WNK/'with no lysine(K)' because key residues for catalysis, including the lysine involved in ATP binding, are either not conserved or differ compared to the residues described in other kinase family proteins.

3702:AT1G64160
gene id: 3702:AT1G64160
uniprot id: A0A5S9WTA0
uniprot id: Q9SH66
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant dirigent protein family.
messages: Confined to shoot meristem, vascular region of cotyledons and siliques abscission zone.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. Enantiocomplementary dirigent protein that mediates the laccase-catalyzed enantioselective oxidative phenol coupling of (E)-coniferyl alcohol to (-)-pinoresinol.
messages: Homodimer.
messages: apoplast

3702:AT3G07010
gene id: 3702:AT3G07010
uniprot id: A0A1I9LSL6
uniprot id: B9DHJ9
uniprot id: Q9M8Z8
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT5G11430
gene id: 3702:AT5G11430
uniprot id: A0A384KD70
uniprot id: A0A384KUC4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G53910
gene id: 3702:AT1G53910
uniprot id: A8MRC0
uniprot id: B9DG10
uniprot id: Q9SSA8
names: Activity Regulation
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Cell membrane
messages: Ethylene-responsive transcription factor RAP2-12, N-terminally processed: The N-terminal cysteine residue of can be oxidized by PCO1 or PCO2, thus preparing the protein for N-end rule pathway-mediated proteasomal degradation.
messages: Highly expressed in seedlings, leaves, flowers, siliques and germinating seeds.
messages: Interacts with ACBP1 and ACBP2.
messages: Nucleus
messages: The N-terminus (1-13) is important for the regulation of the oxygen-dependent activation of the transcription factor activity, an internal region (123-177) is required for the interactions with ACPB1 and ACPB2, while the C-terminus (343-358) is required for positive regulation of gene transcription.
messages: The N-terminus qualifies RAP2-12 as candidate substrate of the N-end rule pathway for protein destabilization. The oxygen-dependent oxidation of Cys-2 prevents hypoxic gene expression via the destabilization of RAP2-12 in air. When the oxygen concentration decreases, Cys oxidation is prevented and an active RAP2.12 accumulates in the nucleus.
messages: Transcription factor involved in the activation of hypoxic gene expression and in ethylene response. Partially redundant with RAP2-2. Acts as a downstream regulator in the ethylene signaling pathway.
messages: Up-regulated by hypoxia but not by ethylene.

3702:AT3G13520
gene id: 3702:AT3G13520
uniprot id: A0A178V8D6
uniprot id: Q9LJD9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AG-peptide AGP family.
messages: Cell membrane
messages: Contains 4-hydroxyproline; hydroxylated on Pro-32, Pro-34 and Pro-36.
messages: Expressed in reproductive tissues. Expressed in chalaza, funiculus, stigma, septum, style and transmitting tract.
messages: Membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT2G14100
gene id: 3702:AT2G14100
uniprot id: A0A654EUD5
uniprot id: Q9SI49
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G61900
gene id: 3702:AT5G61900
uniprot id: Q941L3
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Based on mass spectrometry analysis, the N-peptide must be modified and there might be additional modifications other than myristoylation.
messages: Belongs to the copine family.
messages: Cell membrane
messages: Down-regulated by high temperature. Up-regulated by pathogen, calcium, low humidity, avirulence gene product avrRpt2 and salicylic acid.
messages: Dwarf, twisted leaves and enhanced disease resistance in cv. Columbia when grown at 22 degrees Celsius. No visible phenotype when grown at 28 degrees Celsius, or in cv. Landsberg erecta, cv. No-0, and cv. Wassilewskija at any temperature. Humidity and temperature sensitive lesion mimic phenotype, accelerated hypersensitive response (HR) and increased disease resistance. Bon1 and bon2 double mutants, as well as bon1 and bon3 double mutants are seedling-lethal when grown at 22 degrees Celsius. bon1, bon2 and bon3 triple mutant is seedling-lethal at any temperature.
messages: Expressed in roots and flowers and, at higher levels, in leaves and stems. Strongly expressed in growing tissues. Not detected in green siliques.
messages: Interacts (via VWA domain) with BAP1 and BAP2 (PubMed:17631528). Interacts with HSP70-1 and HSP70-2 (PubMed:26408532).
messages: Negative regulator of cell death and defense responses. Negative regulator of several R genes, including SNC1. May have effects in promoting growth and development. May function in membrane trafficking and in fusion of vesicles with plasma membrane at low temperature. Exhibits calcium-dependent phospholipid binding properties.
messages: Overexpression of BON1 has no effects on pathogen resistance.
messages: The N-terminus (1-116) is sufficient for plasma membrane localization. VWA domain fragments interfere with the function of the full-length protein, triggering a lesion-mimic phenotype.

3702:AT5G41000
gene id: 3702:AT5G41000
uniprot id: A0A178UFR8
uniprot id: A0A1P8BD20
uniprot id: A0A1P8BD27
uniprot id: Q6R3K8
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YSL (TC 2.A.67.2) family.
messages: Induced during senescence.
messages: May be involved in the transport of nicotianamine-chelated metals.
messages: Membrane
messages: Up-regulated in autophagy mutant.

3702:AT5G28290
gene id: 3702:AT5G28290
uniprot id: Q8RX66
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
messages: May be involved in plant development processes.

3702:AT3G03510
gene id: 3702:AT3G03510
uniprot id: Q9SRQ5
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT5G40380
gene id: 3702:AT5G40380
uniprot id: A0A1P8BEK8
uniprot id: A0A1P8BEL2
uniprot id: Q9FNE1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT5G62670
gene id: 3702:AT5G62670
uniprot id: A0A384KVG9
uniprot id: Q53XH7
uniprot id: Q9LV11
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Binds to 14-3-3 proteins. The binding is induced by phosphorylation of Thr-955. Binding to 14-3-3 proteins activates the H(+)-ATPase (By similarity).
messages: Cell membrane
messages: Membrane
messages: The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity).

3702:AT3G09910
gene id: 3702:AT3G09910
uniprot id: Q9SF92
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT5G13170
gene id: 3702:AT5G13170
uniprot id: A0A178UCZ5
uniprot id: Q9FY94
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in leaves during senescence, in a SA-independent manner. Expressed in the lateral roots and in flowers. Expressed in developing seeds (PubMed:25794936).
messages: Belongs to the SWEET sugar transporter family.
messages: Cell membrane
messages: Forms heterooligomers with SWEET1, SWEET6, SWEET8, SWEET11 and SWEET17.
messages: Golgi apparatus membrane
messages: In seedlings, expressed at low levels in the petioles (at protein level) (PubMed:25794936). In young plants, mainly expressed in the roots, particularly in the tips and primordia of lateral roots. In flowering plants, first observed at high levels in young buds of the inflorescence (at protein level), later detected in reproductive tissues, such as pollen grains and ovules. In developing seeds, accumulates specifically at different stages. At globular stage, mostly present in outer integument, but also in endosperm and embryo. At the heart stage, only observed in endosperm and embryo. From the linear mature cotyledon stage until mature seed, accumulates in outer integument and in micropylar endosperm. Detected at low levels in senescent leaves (at protein level) despite a high transcription induction during senescence (PubMed:25794936).
messages: Induced by the pathogenic bacteria P.syringae pv. tomato and the fungal pathogen B.cinerea, as well as by salicylic acid (SA) and abscisic acid (ABA). Induced by osmotic stresses (e.g. cold, high salinity, drought, mannitol, and sorbitol) via an abscisic acid-dependent pathway. Highly induced during senescence (PubMed:25794936). Triggered by NAC072/RD26 during senescence (PubMed:29659022).
messages: Mediates both low-affinity uptake and efflux of sugar across the membrane.
messages: Mediates both low-affinity uptake and efflux of sugar across the plasma membrane. Regulates cell viability under high salinity. Promotes senescence and sensitivity to salt stress (PubMed:20963606). Contributes to seed filling by triggering sucrose efflux involved in the transfer of sugars from seed coat to embryos (PubMed:25988582).
messages: Membrane
messages: Reduced sensitivity to high salinity. In plants lacking SWEET11, SWEET12 and SWEET15, severe seed defects, which include retarded embryo development, reduced seed weight, and reduced starch and lipid content, causing a wrinkled seed phenotype. Altered sucrose efflux involved in the transfer of sugars from seed coat to embryos thus leading to starch accumulation in the seed coat but not in the embryo (PubMed:25794936).

3702:AT2G40900
gene id: 3702:AT2G40900
uniprot id: A0A178VVN5
uniprot id: F4IJ08
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT5G39210
gene id: 3702:AT5G39210
uniprot id: Q9FL87
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Impaired chloroplastic NAD(P)H dehydrogenase (NDH) activity, probably due to a reduced stability of the NDH complex.
messages: Required for both formation and activity of the chloroplast NAD(P)H dehydrogenase (NDH) complex of the photosynthetic electron transport chain. May function in assembly or stabilization of the NDH complex (PubMed:16359395, PubMed:20444231). Required for the accumulation of NDH subcomplex A, which is a core part of NDH. May be involved in post-translational steps during the biogenesis of subcomplex A (PubMed:20444231).
messages: chloroplast stroma

3702:AT3G21190
gene id: 3702:AT3G21190
uniprot id: A0A5S9XFS1
uniprot id: Q9LU40
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase GT106 family.
messages: Decreased of mannosyl levels due to a reduction of glucomannan content.
messages: Glycosyltransferase involved in mannan biosynthesis.
messages: Golgi apparatus membrane
messages: Widely expressed.

3702:AT3G58060
gene id: 3702:AT3G58060
uniprot id: A0A178VEZ3
uniprot id: Q9M2P2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
messages: Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
messages: Membrane
messages: Vacuole membrane

3702:AT5G41110
gene id: 3702:AT5G41110
uniprot id: A0A654G6W8
uniprot id: Q9FLL8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATOS family.
messages: Nucleus

3702:AT1G02470
gene id: 3702:AT1G02470
uniprot id: A0A178WIY8
uniprot id: A8MSF0
uniprot id: F4HXI8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the COQ10 family.
messages: Interacts with coenzyme Q.
messages: Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.

3702:AT3G13750
gene id: 3702:AT3G13750
uniprot id: Q9SCW1
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Ubiquitous, at low levels.
messages: apoplast

3702:AT1G75580
gene id: 3702:AT1G75580
uniprot id: A0A178W4L3
uniprot id: Q9LR00
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: Expressed in organ primordia (PubMed:29258424). Hardly observed in leaves (PubMed:29258424).
messages: Highly active in root primordia, leaf primordia and flower primordia.
messages: Induced by zeatin (PubMed:29258424). Repressed by abscisic acid (PubMed:29258424).
messages: Provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), and triggers PM H(+)-ATPases activity by promoting phosphorylation of their C-terminal autoinhibitory domain as a result of PP2C-D subfamily of type 2C phosphatases inhibition, thus leading to the acidification of the apoplast and the facilitation of solutes and water uptake to drive cell expansion (By similarity). Triggers plant growth probably by promoting cell elongation (By similarity). Regulates branch angles and bending (By similarity).

3702:AT5G22330
gene id: 3702:AT5G22330
uniprot id: A0A178UK47
uniprot id: Q9FMR9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvB family.
messages: Gametophyte lethality.
messages: Interacts with FRI, and with FLX and FES1, two component of the transcription activator complex FRI-C. Interacts with the disease resistance genes RPM1 and RPP5.
messages: Nucleus
messages: Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. Has single-stranded DNA-stimulated ATPase and ATP-dependent DNA helicase (3' to 5') activity suggesting a role in nuclear processes such as recombination and transcription (By similarity).

3702:AT4G09160
gene id: 3702:AT4G09160
uniprot id: A0A1P8B4R9
uniprot id: A0A1P8B4T6
uniprot id: Q9M0R2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: 'Patella' means 'small plate' in Latin.
messages: Belongs to the patellin family.
messages: Carrier protein that may be involved in membrane-trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules such as phosphoinositides and promotes their transfer between the different cellular sites (By similarity).
messages: Cytoplasm
messages: Membrane

3702:AT1G12210
gene id: 3702:AT1G12210
uniprot id: Q8L3R3
names: Domain
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Disease resistance (R) protein.
messages: In contrast to RPS5, which is absent in cv. Landsberg erecta, RFL1 in present in both cv. Columbia and cv. Landsberg erecta.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT3G45990
gene id: 3702:AT3G45990
uniprot id: Q9LZT3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.
messages: Belongs to the actin-binding proteins ADF family.
messages: cytoskeleton

3702:AT3G20540
gene id: 3702:AT3G20540
uniprot id: Q84ND9
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DNA polymerase type-A family.
messages: Expressed in shoot apical meristem.
messages: In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity (By similarity). Required for DNA replication and accumulation in plastids and mitochondria.
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions, but mutant plants have reduced levels of DNA in both mitochondria and plastids. Double homozygous mutants polIa and polIb are sterile.
messages: Not inhibited by aphidicolin.
messages: chloroplast

3702:AT1G33330
gene id: 3702:AT1G33330
uniprot id: Q9C875
names: Similarity
messages: Belongs to the prokaryotic/mitochondrial release factor family.

3702:AT3G50845
gene id: 3702:AT3G50845
uniprot id: A8MR89
names: Function
names: Similarity
messages: Belongs to the MIP18 family.
messages: May play a role in chromosome segregation through establishment of sister chromatid cohesion (By similarity). Unable to complement ae7 mutants, and thus probably not involved in the cytosolic iron-sulfur assembly (CIA) pathway (PubMed:23104832).

3702:AT5G28030
gene id: 3702:AT5G28030
uniprot id: F4K5T2
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.
messages: Cytoplasm
messages: Homodimer.
messages: Inhibited by aminooxyacetate.
messages: Involved in maintaining Cys homeostasis through the desulfuration of L-cysteine. Modulates the generation of the signaling molecule sulfide in plant cytosol. Probably unable to interact with SAT and to form the decameric Cys synthase complex (CSC) and is therefore not an enzymatically true OASTL protein.
messages: No visible phenotype. Light early-flowering and premature leaf senescence phenotype. Increased total cysteine content and increased resistance to pathogens.

3702:AT4G05040
gene id: 3702:AT4G05040
uniprot id: Q94A85
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G14530
gene id: 3702:AT3G14530
uniprot id: Q9LUE1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.
messages: Monomer (By similarity). No interactions with GGR.
messages: chloroplast

3702:AT4G10360
gene id: 3702:AT4G10360
uniprot id: Q93ZA9
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G48530
gene id: 3702:AT1G48530
uniprot id: A0A178WGC9
uniprot id: Q5XVJ3
names: Caution
names: Similarity
messages: Belongs to the proteasome inhibitor PI31 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G20300
gene id: 3702:AT2G20300
uniprot id: Q8RWW0
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Autophosphorylated and phosphorylated by ACR4.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Required during the differentiation of the protoderm into shoots epidermis and cuticle.
messages: Various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs.

3702:AT3G48160
gene id: 3702:AT3G48160
uniprot id: A0A5S9XIV2
uniprot id: Q8LSZ4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Expressed exclusively in mitotically dividing cells. Highly expressed in young leaves and mature flowers. Lower expression in young stalk and in young and mature flowers.
messages: Expressed in a cell cycle-dependent manner. Not detected during early S phase. Expressed at both the G1/S and S/G2 transitions, with a peak during G2.
messages: Inhibitor of E2F-dependent activation of gene expression. Binds specifically the E2 recognition site without interacting with DP proteins and prevents transcription activation by E2F/DP heterodimers. Controls the timing of endocycle onset and inhibits endoreduplication.
messages: No visible phenotype, but increased ploidy levels.
messages: Nucleus

3702:AT2G36380
gene id: 3702:AT2G36380
uniprot id: A0A178VWW9
uniprot id: Q7PC87
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
messages: Expressed in roots at low levels.
messages: Induced by cold/dark treatment, 2,4-D, epibrassinolide (EBR), sodium chloride (NaCl) and cadmium (Cd).
messages: May be a general defense protein.
messages: Membrane

3702:AT4G11110
gene id: 3702:AT4G11110
uniprot id: Q9T014
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with CO and COP1.
messages: Involved in suppression of photomorphogenesis in dark-grown seedlings. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex.
messages: Not induced by red, far-red or blue light.
messages: Nucleus
messages: The protein kinase domain is predicted to be catalytically inactive. The DWD box is required for interaction with DDB1A (By similarity).

3702:AT1G02410
gene id: 3702:AT1G02410
uniprot id: A0A178WLX7
uniprot id: Q8GWR0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COX11/CtaG (TC 3.D.4.8) family.
messages: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.
messages: Mitochondrion inner membrane

3702:AT2G13690
gene id: 3702:AT2G13690
uniprot id: Q9SKH2
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT5G41685
gene id: 3702:AT5G41685
uniprot id: A0A654G762
uniprot id: Q0WLA8
uniprot id: Q9ASY8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tom7 family.
messages: Expressed in roots, flowers, young cotyledons and leaves.
messages: Forms part of the preprotein translocase complex of the outer mitochondrial membrane (TOM complex) which consists of at least 6 different proteins (TOM5, TOM6, TOM7, TOM20, TOM22/TOM9 and TOM40).
messages: Membrane
messages: Mitochondrion outer membrane
messages: Seems to act as a modulator of the dynamics of the mitochondrial protein transport machinery. Seems to promote the dissociation of subunits of the outer membrane translocase (By similarity).

3702:AT3G17430
gene id: 3702:AT3G17430
uniprot id: A0A178VCQ1
uniprot id: A0A384KZW7
uniprot id: Q9LRP2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT2G38240
gene id: 3702:AT2G38240
uniprot id: A0A654FAH7
uniprot id: O80449
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: 2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway (PubMed:28760569, PubMed:28559313). Converts JA to 12-hydroxyjasmonate (12OH-JA), an inactive form of JA (PubMed:28760569, PubMed:28559313). Is specific to free JA, and cannot oxidize the bioactive form jasmonoyl-L-isoleucine (JA-Ile) or other JA-amino acid conjugates (PubMed:28760569). Prevents over-accumulation of JA and indirectly its bioactive form JA-Ile under stress response (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense signaling, by contributing to 12OH-JA accumulation, which represses JA defense responses upon infection by the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense responses upon infestation by the herbivorous caterpillar Mamestra brassicae (PubMed:28559313).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Induced by infection with the bacterial pathogen Pseudomonas syringae pv. tomato (PubMed:16553894). Induced by wounding (PubMed:17675405, PubMed:28760569). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Induced by methyl jasmonate (MeJA) (PubMed:28559313). Induced by infestation with the caterpillar Mamestra brassicae (PubMed:28559313). Induced by salt stress (PubMed:11351099). Down-regulated by UV-B (PubMed:17587374).
messages: The quadruple mutant jox1, jox2, jox3 and jox4 exhibit reduced root and shoot growth, delayed flowering, reduced seed production, constitutively elevated jasmonate and jasmonoyl-L-isoleucine levels, and enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae.

3702:AT1G72750
gene id: 3702:AT1G72750
uniprot id: A0A178W370
uniprot id: Q38820
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family.
messages: Component of the TIM23 complex, at least composed of TIM23, TIM17, TIM50 and TIM21.
messages: Essential component of the TIM17:23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. Links the inner and outer membranes (By similarity).
messages: Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
messages: Expressed in roots and young cotyledons. Detected in leaves and flowers.
messages: Homomultimer. Component of the TIM17:23 complex at least composed of TIM23, TIM17 and TIM50. The complex interacts with the TIM44 component of the PAM complex. Also part of the NADH-ubiquinone oxidoreductase complex I. Interacts with OEP163, TIM17-2, TIM21, TIM50 and MPPA2.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Peak of expression during cotyledon development.
messages: The C-terminal part (143-188) is required for insertion in the mitochondrial inner membrane.

3702:AT4G20610
gene id: 3702:AT4G20610
uniprot id: A0A178UZA6
uniprot id: P0CJ49
uniprot id: P0CJ50
uniprot id: P0CJ51
uniprot id: P0CJ52
uniprot id: P0CJ53
uniprot id: P0CJ54
uniprot id: P0CJ55
uniprot id: P0CJ56
uniprot id: P0CJ57
uniprot id: P0CJ58
uniprot id: P0CJ59
uniprot id: P0CJ60
uniprot id: P0CJ61
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G11010
gene id: 3702:AT3G11010
uniprot id: A0A1I9LN74
uniprot id: A0A1I9LN75
uniprot id: A0A1I9LN76
uniprot id: A0A1I9LN77
uniprot id: Q9SRL2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.
messages: Membrane

3702:AT4G02130
gene id: 3702:AT4G02130
uniprot id: A0A654FL79
uniprot id: O04253
uniprot id: W8Q309
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.

3702:AT4G11880
gene id: 3702:AT4G11880
uniprot id: A0A1P8B7Y6
uniprot id: Q38838
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By auxin.
messages: During floral transition, expressed very early at the flanks of the inflorescence meristem in the anlagens upon the transition to flowering Subsequently, expression levels increase in the first and second stages of the floral meristem and at stage 3, expression is restricted to the L1 and L2 layers. Later on, expressed in the gynoecium and stamen primordia at stage 6.
messages: Interacts with AGL16.
messages: Nucleus
messages: Plants over-expressing AGL14/XAL2 show early flowering phenotype and flowers have vegetative traits.
messages: Preferentially expressed in roots (PubMed:7549482). Expressed in lateral root cap, root epidermis, root endodermis, columella of the root meristematic region, the vascular cylinder in differentiated zones of the primary root and in emerged lateral root primordia (PubMed:24121311). Expressed in pollen (PubMed:12949148).
messages: Retarded root growth, and altered root meristem size and stem-cell patterning (PubMed:24121311). Late flowering phenotype (PubMed:25636918).
messages: Transcriptional activator that regulates root development by controlling meristem size and patterning of the root apical meristem. Regulates auxin transport and gradients in the root meristematic cells via direct regulation of the auxin efflux carrier PIN1 and PIN4 gene expression. Binds specifically to the CArG-box DNA sequences in the promoter regions of PIN1 and PIN4 genes (PubMed:24121311). Involved in the regulation of shoot apical meristem (SAM) cell identities and transitions. Promotes flowering transition and participates in flower meristem maintenance and determinacy. Positively regulates TFL1 and WUS expression. Binds directly to the TFL1 regulatory sequences (PubMed:25636918).
messages: XAANTAL is the Mayan word for 'go slower' in recognition of the retarded root growth phenotypes of xaantal mutants.

3702:AT1G60550
gene id: 3702:AT1G60550
uniprot id: A0A654EL98
uniprot id: Q8GYN9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
messages: Homohexamer.
messages: Involved in the biosynthesis of phylloquinone (vitamin K1). Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) (By similarity).
messages: Peroxisome
messages: The hydrogencarbonate anion plays the same catalytic role (proton acceptor) as the side-chain carboxylate group of the essential 'Asp-185' found in actinobacteria, archaea, bacteroidetes, and deltaproteobacteria.

3702:AT1G70140
gene id: 3702:AT1G70140
uniprot id: O04532
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the formin-like family. Class-I subfamily.
messages: Cell membrane
messages: Interacts with profilin.
messages: Might be involved in the organization and polarity of the actin cytoskeleton. Interacts with the barbed end of actin filaments and nucleates actin-filament polymerization in vitro.

3702:AT1G47720
gene id: 3702:AT1G47720
uniprot id: Q9SX99
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in root elongation zone and in gametophytic cells.
messages: Mitochondrion
messages: Regulates mitochondrial DNA recombination. Represses homologous recombination, preventing mitochondrial genome instability and unbalanced transmission of alternative mtDNA configurations. Binds preferentially single-stranded DNA. Does not bind to RNA.
messages: Severe leaf variegation, distortion and partial sterility.
messages: The PDF region is required for protein-DNA interaction while the SSB domain is not required for ssDNA binding.

3702:AT5G10160
gene id: 3702:AT5G10160
uniprot id: A0A178USI4
uniprot id: Q9LX13
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.

3702:AT5G38890
gene id: 3702:AT5G38890
uniprot id: A0A654G6B9
uniprot id: A2RVT9
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT3G18910
gene id: 3702:AT3G18910
uniprot id: Q9LJ74
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subunit
messages: Double knock-down mutants of ETP1 and ETP2 show an accumulation of EIN2 protein and a constitutive ethylene response.
messages: Ethylene treatment has no effect on RNA, but down-regulates the protein levels.
messages: Interacts with EIN2 (via C-terminus).
messages: Negative regulator of EIN2 protein stability.
messages: No visible phenotype, probably due to the redundancy with ETP1.

3702:AT1G47960
gene id: 3702:AT1G47960
uniprot id: F4HWQ8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Increased vacuolar invertase activity leading to accumulation of hexose.
messages: Inhibits fructosidases from vacuoles (vacuolar invertase VI).
messages: Mostly expressed in roots, senescent leaves and flowers (in sepals), and, to a lower extent, in stems, specifically in the vascular tissues (e.g. in the phloem).
messages: Vacuole

3702:AT3G17390
gene id: 3702:AT3G17390
uniprot id: A0A178VIP8
uniprot id: Q9LUT2
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate (By similarity).
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate (By similarity). Can utilize magnesium, manganese or cobalt (in vitro) (By similarity).
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.
messages: Cytoplasm
messages: Detected in trichomes (at the protein level).
messages: Homotetramer.
messages: Induced by cold.

3702:AT2G35770
gene id: 3702:AT2G35770
uniprot id: Q8S8K6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings, roots and senescent leaves.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT2G15980
gene id: 3702:AT2G15980
uniprot id: Q9XIM8
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G50460
gene id: 3702:AT3G50460
uniprot id: Q9SCS8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant RPW8 protein family.
messages: Expressed in leaves after powdery mildew infection (e.g. Erysiphe cichoracearum UCSC1).
messages: Membrane
messages: Probable disease resistance (R) protein.

3702:AT5G50375
gene id: 3702:AT5G50375
uniprot id: Q9M643
names: Function
names: Subcellular Location Annotation
messages: Converts pentacyclic cyclopropyl sterols to tetracyclic sterols.
messages: Membrane

3702:AT5G38317
gene id: 3702:AT5G38317
uniprot id: P82772
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Contains 8 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT3G51080
gene id: 3702:AT3G51080
uniprot id: A0A178VKT0
uniprot id: Q9SD38
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT4G13190
gene id: 3702:AT4G13190
uniprot id: A0A1P8B6K7
uniprot id: Q1PE89
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: May be involved in plant defense signaling.

3702:AT2G42380
gene id: 3702:AT2G42380
uniprot id: F4IN23
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in vascular tissues of leaves, stems and siliques, anthers, filaments, tapetum, mature pollen grains, pistil vascular tissues and papillar cells, and funiculi.
messages: Forms heterodimers with BZIP18, BZIP43 and VIP1/BZIP51.
messages: Nucleus
messages: Pollen morphological defects, reduced pollen germination efficiency and pollen tube growth.
messages: Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism.

3702:AT3G27240
gene id: 3702:AT3G27240
uniprot id: A0A178VJH9
uniprot id: Q9LK29
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c family.
messages: Binds 1 heme c group covalently per subunit.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c. Cytochrome c1 is a catalytic core subunit containing a c-type heme. It transfers electrons from the [2Fe-2S] iron-sulfur cluster of the Rieske protein to cytochrome c.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT2G17450
gene id: 3702:AT2G17450
uniprot id: O22755
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auto-monoubiquitination.
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase that possess E3 ubiquitin ligase activity in vitro and mediates protein monoubiquitination (Ref.7). Triggers the monoubiquitination of phosphorylated BIK1 in response to pathogen-associated molecular pattern (PAMP) detection (Ref.7).
messages: Expressed in stems, flowers and green siliques.
messages: Interacts with BIK1.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G30810
gene id: 3702:AT4G30810
uniprot id: A0A654FUD6
uniprot id: Q949Q7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings, roots, leaves and flowers.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT3G17980
gene id: 3702:AT3G17980
uniprot id: A0A5S9XDE1
uniprot id: Q9LVH4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Cell membrane
messages: Dimers and oligomers (PubMed:26719420). Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus (PubMed:25465408, PubMed:26719420). Interacts directly with PYR1, PYL1, PYL4, PYL6 and PYL8 (PubMed:25465408, PubMed:26719420). Binds phospholipids in a Ca(2+)-dependent manner (PubMed:25465408). Interacts with YchF1 (PubMed:23550829).
messages: Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (PubMed:26719420, PubMed:25465408). Stimulates the GTPase/ATPase activities of YchF1, and regulates its subcellular localization. Promotes tolerance towards salinity stress by limiting the accumulation of reactive oxygen species (ROS) (PubMed:23550829). Promotes resistance to bacterial pathogens (e.g. Xanthomonas oryzae pv. oryzae and P. syringae pv. tomato DC3000) (By similarity). Binds liposomes in the absence of exogenous Ca(2+), but this activity is enhanced in the presence of Ca(2+) and generates membrane curvature (PubMed:26719420).
messages: Membrane
messages: Nucleus
messages: When associated with disruption in CAR1, CAR5 and CAR9 genes, reduced sensitivity to abscisic acid (ABA) during seedling establishment and root growth regulation.
messages: cytosol

3702:AT2G47830
gene id: 3702:AT2G47830
uniprot id: A0A178VPX5
uniprot id: A0A384LQL2
uniprot id: Q8L725
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
messages: Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
messages: May be due to a competing donor splice site.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuole membrane

3702:AT4G28410
gene id: 3702:AT4G28410
uniprot id: A0A1P8B6P3
uniprot id: A0A654FTV3
uniprot id: F4JL94
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

3702:AT5G53550
gene id: 3702:AT5G53550
uniprot id: A0A178U7D6
uniprot id: A0A1P8BFW1
uniprot id: Q2EF88
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the YSL (TC 2.A.67.2) family.
messages: Expressed in leaves, anthers and pollen grains. Restricted to the vasculature.
messages: Highly expressed during leaf senescence.
messages: May be involved in the lateral transport of nicotianamine-chelated metals in the vasculature.
messages: Membrane
messages: No visible phenotype.
messages: Slight induction by manganese, copper or zinc deficiency. Inhibited upon iron deficiency and induced by iron overload.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G18180
gene id: 3702:AT1G18180
uniprot id: A0A1P8AMH3
uniprot id: F4IAN4
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G48945
gene id: 3702:AT5G48945
uniprot id: P82761
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G77405
gene id: 3702:AT1G77405
uniprot id: Q1PFC5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G79990
gene id: 3702:AT1G79990
uniprot id: A0A178WGE9
uniprot id: F4HQE7
uniprot id: Q9CAA0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat COPB2 family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:ArthCp009
gene id: 3702:ArthCp009
uniprot id: A0A1B1W4S3
uniprot id: P56760
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase C chain family.
messages: Dicyclohexylcarbodiimide (DCDD) inhibits ATPase.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: In plastids the F-type ATPase is also known as CF(1)CF(0).
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: This protein is one of the chains of the nonenzymatic membrane component (F0) of mitochondrial ATPase.
messages: chloroplast thylakoid membrane

3702:AT1G02130
gene id: 3702:AT1G02130
uniprot id: P28188
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Does not interact with GC5.
messages: Golgi apparatus membrane
messages: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER).
messages: trans-Golgi network membrane

3702:AT2G42260
gene id: 3702:AT2G42260
uniprot id: O48533
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in an S phase-dependent fashion.
messages: Expressed mainly in actively dividing cells (e.g. central cylinder of the root tip, young leaves and vascular tissues).
messages: Interacts with APC/C activators such as APC5, FZR2, FZR3, CDC20.1 and CDC20.5.
messages: Levels fade progressively in a basipetal fashion as the leaf develops.
messages: Negative regulator of the anaphase-promoting complex/cyclosome (APC/C) ubiquitin ligase required for proper mitotic progression and cell fate determination; inhibits premature cell differentiation. Prevents DNA endoreplication by promoting the maintenance of the mitotic state by preferentially inhibiting APC/C(FZR) and triggering cyclins accumulation (e.g. CYCB1-1, CYCB1-2 and CYCA2-3) in a temporal manner. Required for megagametophyte and endosperm development. Counteracts the activity of CCS52A1 thus inhibiting the turnover of CYCA2-3. Confers immunity to bacterial pathogens (e.g. Pseudomonas syringae pv. tomato DC3000), which is associated with increased expression of disease resistance (R) genes.
messages: Nucleus
messages: Premature occurrence of endoreplication during organ development leading to an increased DNA content in hypocotyls and trichomes associated with an increased branching of trichomes (e.g. four to five branches). Reduced accumulation of CYCA2-3 during the S phase leading to a premature exit from the cell cycle, thus triggering the onset of the endocycle. Increased tolerance towards ultraviolet B light (UVB), probably due to the enhanced polyploidization. Considerably larger average cell area in the leaf adaxial epidermis leading to fewer but larger epidermal cells.

3702:AT3G50060
gene id: 3702:AT3G50060
uniprot id: Q9SN12
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in leaves from the third leaf to rosette leaves from six-week old plants. Expression follows a development-dependent gradient in successive leaves.
messages: Expressed in roots, stems and flowers. Expressed in dry seeds (PubMed:9678577). Expressed in root vasculature, root tips and lateral root (PubMed:17675404).
messages: Induced by auxin (PubMed:17675404). Down-regulated by potassium deprivation (PubMed:15173595).
messages: Interacts with ARF1, ARF7 and IAA19 (PubMed:17675404). Interacts with PYL8 (PubMed:24894996).
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Plants overexpressing MYB77 exhibit stunted roots and shoots.
messages: Transcription factor involved in auxin response. Functions in auxin signal transduction and modulates lateral root growth. Interacts with ARF response factors to promote auxin-responsive gene expression (PubMed:17675404). In response to auxin, binds sequence-specific motifs in the promoter of the auxin-responsive gene IAA19, and activates IAA19 transcription. The IAA19 transcription activation by MYB77 is enhanced by direct interaction between MYB77 and PYL8 (PubMed:24894996).

3702:AT1G17147
gene id: 3702:AT1G17147
uniprot id: Q1G3U8
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with WRKY33.
messages: May modulate WRKY transcription factor activities.
messages: Nucleus

3702:AT4G35130
gene id: 3702:AT4G35130
uniprot id: A0A5S9XYS2
uniprot id: O49619
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: chloroplast

3702:AT5G17420
gene id: 3702:AT5G17420
uniprot id: A0A384LP57
uniprot id: Q9SWW6
uniprot id: W8PV01
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening.
messages: Cell membrane
messages: Confined to secondary cell wall developing tissues such as xylems and interfascicular regions. Expressed in young plants, stems and flowers, but not in leaves, roots and shoots.
messages: Interacts with CESA4 and CESA8. Assembly with CESA4 and CESA8 is required for functional complex and localization in secondary cell wall deposition sites. Interacts with STL1 and STL2, but not with GOT1 (PubMed:27277162). Binds to TED6 (PubMed:19383897).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Not found in embryos. Increasing amount as stems mature.
messages: Phosphorylated protein may be subject to proteasome degradation.
messages: Reduced plant size, reduced content of cellulose, collapsed xylem vessels and wilting of inflorescence stems (PubMed:9165747). Enhanced resistance to the pathogens Ralstonia solanacearum and Plectosphaerella cucumerina (PubMed:17351116).
messages: S-acylated at Cys-621, Cys-623, Cys-624, Cys-626, Cys-1022 and Cys-1026. The ratio of acylation by either palmitate or stearate is unknown. S-acylation is essential for plasma membrane localization.

3702:AT1G54610
gene id: 3702:AT1G54610
uniprot id: Q9ZVM9
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT5G41570
gene id: 3702:AT5G41570
uniprot id: Q0WTM6
uniprot id: Q9FFS3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-c family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT4G30580
gene id: 3702:AT4G30580
uniprot id: A0A5S9XY19
uniprot id: Q8GXU8
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
messages: Embryonic lethality due to embryo development arrest at globular stage.
messages: Expression transiently increases in siliques 4 hours after flowering.
messages: Plastidial enzyme of the prokaryotic glycerol-3-phosphate pathway that converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at position sn-2 (PubMed:15169931). Utilizes palmitoyl-ACP (16:0-ACP) to produce phosphatidic acid containing a saturated group at position sn-2, which is characteristic of lipids synthesized by the prokaryotic pathway (PubMed:15169931). In vitro, can use 16:0-CoA as acyl donor (PubMed:14976237). Essential for embryo development during the transition from the globular to the heart stage when chloroplasts begin to form (PubMed:15169931, PubMed:14976237).
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: Widely expressed. Expressed at higher level in leaves. Expressed at lower level in silique walls compared to leaves.
messages: chloroplast membrane

3702:AT5G41880
gene id: 3702:AT5G41880
uniprot id: F4JZZ1
names: Similarity
messages: Belongs to the eukaryotic-type primase small subunit family.

3702:AT1G15160
gene id: 3702:AT1G15160
uniprot id: A0A654EAS3
uniprot id: F4HZH9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT1G70170
gene id: 3702:AT1G70170
uniprot id: A0A178WK53
uniprot id: O04529
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates during aging. Expressed in leaves and roots of young seedlings and in leaves, roots, and inflorescences of mature flowering plants. In leaves, present in the phloem, in developing xylem elements, epidermal cells, and neighboring mesophyll cell layers. In flowers, localized in pistils, ovules, and receptacles.
messages: Belongs to the peptidase M10A family. Matrix metalloproteinases (MMPs) subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Can bind about 5 Ca(2+) ions per subunit.
messages: Cell membrane
messages: Growth inhibition, due to inhibited onset of shoots, reduced growth of roots, leaves and shoots, late flowering, fast degradation of chlorophyll in leaves and early senescence.
messages: Induced in seedling rosette leaves by methyl jasmonate (MeJA) and cadmium (Cd). Induced in seedling roots by salt stress (NaCl). Inhibited in leaves and inflorescences of adult plants by exposure to cadmium.
messages: Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Required for plant growth, morphogenesis, and development with particular relevance for flowering and senescence (PubMed:11726650). Active on McaPLGLDpaAR-NH(2) (QF24) and myelin basic protein (MBP) and, to some extent, on beta-casein (PubMed:24156403).
messages: Mostly expressed in roots, and, to a lower extent, in flowers, leaves and stems.
messages: Repressed by acetohydroxamic acid (AHA).
messages: The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme.

3702:AT2G38840
gene id: 3702:AT2G38840
uniprot id: F4ITY5
names: Similarity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3 GTPase family.

3702:AT1G01520
gene id: 3702:AT1G01520
uniprot id: A0A384LJW3
uniprot id: Q6R0H0
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G45240
gene id: 3702:AT3G45240
uniprot id: F4J5I5
uniprot id: Q93V58
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated when autophosphorylated at Thr-154 and inactivated when phosphorylated at Ser-261 by SnRK1.1/KIN10.
messages: Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively. Required for the regulation by SnRK1 kinases of the transcription of a large set of genes, the modification the activity of metabolic enzymes, and the control of various nutrient-responsive cellular developmental processes.
messages: Associates with the SNF1-related protein kinase (SnRK) complex (By similarity). Interacts with AL1, a geminivirus (TGMV) protein essential for viral replication.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By geminivirus (TGMV, CaLCuV or BCTV) infection (at the protein level).
messages: Cytoplasm
messages: Expressed in shoot apical meristem, leaf primordium and emerging petiole (at protein level).
messages: Functionally able to complement the yeast elm1 sak1 tos3 triple mutant.
messages: Highly expressed in young leaf and floral tissues but not expressed in mature tissues (at protein level).
messages: Nucleus

3702:AT1G08080
gene id: 3702:AT1G08080
uniprot id: A0A5S9T9F2
uniprot id: Q8L817
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: N-glycosylated.
messages: Reversible hydration of carbon dioxide.
messages: chloroplast stroma

3702:AT4G22200
gene id: 3702:AT4G22200
uniprot id: A0A1P8B652
uniprot id: A0A5S9XUU3
uniprot id: Q38898
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.
messages: Delayed development and flowering.
messages: Dephosphorylated by PP2CA.
messages: Endoplasmic reticulum membrane
messages: Expressed mainly in the phloem tissues throughout the plant but also, at a lower level, in leaf epiderm, mesophyll and guard cells.
messages: Highly selective and weak inward-rectifying potassium channel. Plays a role in both loading and unloading potassium into/from the phloem sap. Seems to control sugar loading into phloem via a voltage-dependent process. Blocked by physiological concentrations of external calcium and by external acidification. May interact with the cytoskeleton or with regulatory proteins. Dephosphorylation by PP2CA not only leads to the inhibition of potassium currents but also to an increase of the voltage-dependence of the channel. Regulated by the CBL4/CIPK6 calcium sensor/protein kinase complex via a kinase interaction-dependent but phosphorylation-independent translocation of the channel to the plasma membrane.
messages: In shoots, strongly induced by abscisic acid (ABA) treatment and reduced after NaCl treatment or potassium starvation.
messages: Membrane
messages: Potassium channel.
messages: The KHA domain (rich in hydrophobic and acidic residues) present in the C-terminal part is likely to be important for tetramerization.
messages: The potassium channel is composed of a homo- or heterotetrameric complex of pore-forming subunits.
messages: The potassium channel is probably composed of a homo- or heterotetrameric complex of pore-forming subunits. Interacts with the phosphatase PPC2A and the kinase CIPK6. May interact with AKT1, KAT1 and KAT3. Interacts with SLAC1 (PubMed:27002025).
messages: The segment S4 is probably the voltage-sensor and is characterized by a series of positively charged amino acids. The pore-forming region H5 is enclosed by the transmembrane segments S5 and S6 in the Shaker-type (1P/6TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity.

3702:AT4G05530
gene id: 3702:AT4G05530
uniprot id: Q9S9W2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Defective in root hair expansion (PubMed:20562230). Mutant plants are resistant to the inhibitory effect of intermediate levels of indole-3-butyric acid (IBA) and 2,4-DB on root elongation (PubMed:18725356, PubMed:19043666).
messages: Involved with IBR3 and IBR10 in the peroxisomal beta-oxidation of indole-3-butyric acid (IBA) to form indole-3-acetic acid (IAA), a biologically active auxin. May be responsible for catalyzing the dehydrogenation step in the conversion of IBA (PubMed:20562230). May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth (PubMed:19043666).
messages: Peroxisome

3702:AT1G70800
gene id: 3702:AT1G70800
uniprot id: A0A654EMV9
uniprot id: Q9S764
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Subunit of a complex made of CAR6, PHOT1 and RPT3/NPH3. Interacts directly with RPT3/NPH3 (PubMed:21367967).
messages: Cell membrane
messages: Increased sensitivity to blue light leading to an enhanced phototropic bending and a faster response to gravitropic stimulus.
messages: Membrane
messages: Nucleus
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity). Prevents hypocotyl bending as well as gravitropic response under blue light conditions (PubMed:21367967).

3702:AT1G09150
gene id: 3702:AT1G09150
uniprot id: A0A178WGM6
uniprot id: Q8L7N2
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT1G01550
gene id: 3702:AT1G01550
uniprot id: Q9LMM6
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots, hypocotyls, cotyledons, leaves, flowers and siliques.
messages: Required for normal root and shoot development. Prevents constitutive production of a root mobile carotenoid-derived signaling compound that is capable of arresting shoot and leaf development.
messages: The mobile signal produced in absence of BPS1 is neither abscisic acid nor the MAX-dependent hormone.
messages: chloroplast

3702:AT5G53470
gene id: 3702:AT5G53470
uniprot id: Q9SM23
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ACBP family.
messages: Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with arachidonyl-CoA, barely with oleoyl-CoA, but not with palmitoyl-CoA. Confers tolerance and binds to lead ions Pb(2+), probably by promoting lead translocation from roots to shoots. May function as an intracellular carrier of acyl-CoA esters (By similarity). Modulates negatively sterol synthesis during embryogenesis and gametophytes development via interactions with SMO1-1 and SMO1-2; sterols serve as lipid modulators for gene expression of homeodomain-leucine zipper IV transcription factors (PubMed:28500265, PubMed:29288621).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Expressed at low levels in roots, stems, leaves, flowers, and siliques, especially within seeds.
messages: Glycosylated. In seeds, localized in the outer integument.
messages: In roots by lead.
messages: Increased sensitivity to lead ions (PubMed:18182029). Proembryo abortion in the double mutant lacking both SMO1-1 and ACBP1 associated with altered fatty acids (FAs) and sterols profiles (PubMed:28500265). Double mutants lacking SMO1-2 and ACBP1 are impaired in seed development, embryo sac development, male and female gamete transmission, and pollen function, as well as altered fatty acids (FAs) and sterols profiles (PubMed:29288621).
messages: Interacts with RAP2-12 (PubMed:22020282). Binds to SMO1-1 and SMO1-2 (PubMed:28500265, PubMed:29288621).
messages: Strongly expressed in developing ovules (PubMed:28500265). Expressed in embryos at the cotyledons, hypocotyls, procambiums, especially in epidermal cells and axis (PubMed:10363372, PubMed:28500265). Accumulates in imbibed pollen grains and in germinating pollen tubes (PubMed:29288621). Detected in embryo sacs (PubMed:29288621).
messages: cell wall

3702:AT2G43810
gene id: 3702:AT2G43810
uniprot id: A0A178VRX5
uniprot id: O22823
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the snRNP Sm proteins family.
messages: Belongs to the snRNP Sm proteins family. SmF/LSm6 subfamily.
messages: Component of LSM protein complexes, which are involved in RNA processing. Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. The cytoplasmic LSM1-LSM7 complex regulates developmental gene expression by the decapping of specific development-related transcripts. Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs) and is essential for accurate splicing of selected development-related mRNAs through the stabilization of the spliceosomal U6 snRNA. Plays a critical role in the regulation of development-related gene expression.
messages: Component of the heptameric LSM1-LSM7 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM1, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4. Component of the heptameric LSM2-LSM8 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM8, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM6B subunit interacts only with its two neighboring subunits, LSM3A or LSM3B and LSM5 (PubMed:23221597).
messages: Cytoplasm
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Nucleus

3702:AT2G41230
gene id: 3702:AT2G41230
uniprot id: A0A178VRU5
uniprot id: Q8RWS1
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant organ size related (OSR) protein family.
messages: Cytoplasm
messages: Detected in leaf primordia. In leaves, present in the blade and the petiole, especially at the dispersed meristematic regions and the leaf margin. Accumulates in floral organs.
messages: Endoplasmic reticulum
messages: Induced by ethylene but repressed by abscisic acid (ABA) and epi-brassinolide (epi-BL) treatments.
messages: Membrane
messages: Mostly expressed in flowers, and, to a lower extent, in leaves and cotyledons.
messages: Nucleus
messages: The OSR domain is sufficient to promote organ growth.
messages: Together with ARGOS and ARL, regulates organ growth and final organ size. Promotes both cell expansion and proliferation-dependent organ growth, in an ANT-dependent manner.
messages: When associated with ARGOS disruption, reduction in organ size.

3702:AT5G17240
gene id: 3702:AT5G17240
uniprot id: Q6NQJ8
names: Similarity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily.

3702:AT2G46520
gene id: 3702:AT2G46520
uniprot id: Q9ZPY7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XPO2/CSE1 family.
messages: Binds with high affinity to importin-alpha only in the presence of RanGTP.
messages: Cytoplasm
messages: Export receptor for importin alpha. Mediates importin-alpha re-export from the nucleus to the cytoplasm after import substrates have been released into the nucleoplasm (By similarity).
messages: Nucleus

3702:AT5G49130
gene id: 3702:AT5G49130
uniprot id: Q9FH21
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT5G54660
gene id: 3702:AT5G54660
uniprot id: Q9FIT9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Cytoplasm
messages: May form oligomeric structures.

3702:AT3G19900
gene id: 3702:AT3G19900
uniprot id: A0A384LEI9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G29100
gene id: 3702:AT2G29100
uniprot id: A0A178VR79
uniprot id: A0A384KSM3
uniprot id: O81078
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G19380
gene id: 3702:AT5G19380
uniprot id: A0A654G2G2
uniprot id: F4K139
uniprot id: Q058P6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CRT-like transporter family.
messages: Involved in thiol transport from the plastid to the cytosol. Transports probably both glutathione (GSH) and its precursor, gamma-glutamylcysteine (gamma-EC). Exhibits some functional redundancy with CLT3 in maintaining the root GSH pool.
messages: Membrane
messages: No visible phenotype, but resistance to L-buthionine-SR-sulfoximine (BSO), an inhibitor of GSH1. Clt1, clt3 and clt3 triple mutants are more sensitive to Cd(2+), have a decreased level of cytosolic GSH, an altered systemic acquired resistance response and are more sensitive to Phytophthora infection (PubMed:20080670). Clt1, clt3 and clt3 triple mutants have decreased lateral root densities (PubMed:24204368).
messages: chloroplast membrane

3702:AT3G54120
gene id: 3702:AT3G54120
uniprot id: A0A654FFM6
uniprot id: Q9M392
names: Caution
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT1G75010
gene id: 3702:AT1G75010
uniprot id: Q6F6B5
names: Disruption Phenotype
names: Domain
names: Function
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
messages: Intron retention.
messages: MORN domains promote interaction with ARC6 and CDP1/PARC6 but prevent binding to FTSZ1, FTSZ2, MIND and MINE proteins.
messages: Self-interacts. Interacts with FTSZ, CDP1/PARC6 (via N-terminus), MIND1 and MINE1 (PubMed:26527658, PubMed:30824505). Part of a complex made of ARC3, ARC6, FTSZ1 and FTSZ2 (PubMed:30824505). Recruited to the middle of the plastid by CDP1/PARC6 where subsequent complex made of CDP1/PARC6, ARC3 and FtsZ proteins can form; this complex enhances the dynamics of Z rings during chloroplast division (PubMed:30824505). Binding to FTSZ2-1 is enabled by ARC6 (PubMed:29138260).
messages: Small number of abnormally large and heterogeneous chloroplasts sometimes exhibiting alteration in stromule length and frequency in non-green tissues (e.g. slightly increased stromule frequency in hypocotyl epidermal cells) (PubMed:30824505, PubMed:23936263). Normal shape and number of etioplasts in cotyledons (PubMed:23936263). Misexpression and mislocalization of ADT2 (PubMed:30252596). Formation of multiple MCD1 and MIND1-containing ring structures in dividing chloroplasts, instead of single ring (PubMed:29967285). Slow trunover of FtsZ ring subunits (e.g. FTSZ2-1, FTSZ2-2 and FTSZ1) in contractile rings at the chloroplast midpoint (PubMed:25731613).
messages: Together with MIND1 and MCD1, regulates FtsZ ring positioning in chloroplasts in an ARC6-dependent manner (PubMed:29967285). Z-ring accessory protein involved in the initiation of plastid division and division site placement (might functionally replace bacterial MinC) (PubMed:23936263). Acts as a disassembly factor that accelerates fragmentation and depolymerization of existing FtsZ2 filaments by enhancing FTSZ2 GTPase activity, thus leading to the conversion of FTSZ2 bound GTP into GDP, a process which triggers FtsZ2 filaments destabilization (PubMed:29138260, PubMed:25731613). Prevents misplaced Z-ring formation at chloroplast stroma nondivision sites (PubMed:30824505). May control the rate of chloroplast expansion. Seems to influence stromule (stroma-filled tubular extensions of the plastid envelope membrane) length and frequency.
messages: chloroplast outer membrane
messages: chloroplast stroma

3702:AT1G49320
gene id: 3702:AT1G49320
uniprot id: Q9XI99
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Associated with the protein storage vacuole formation.
messages: Expressed in cotyledons, radicle, floral buds, open flowers, roots and developing seeds, but not in leaves (PubMed:19714473). Highly expressed in the root tips. Detected in young leaves, hypocotyls, stems and mature seed funiculum (PubMed:25333723).
messages: Expressed in embryos at the cotyledon stage.
messages: Golgi stack
messages: No visible effect on seed development, but significant reduction of 11S seed storage protein content in the mature seeds (PubMed:19639386). Enhanced drought tolerance (PubMed:25333723).
messages: Prevacuolar compartment
messages: Protein storage vacuole
messages: The BURP domain located at the C-terminus has not been identified in non-plant proteins.
messages: Up-regulated in the root by dehydration, salt stress, osmotic stress, high temperature and abscisic acid.
messages: trans-Golgi network

3702:AT3G11180
gene id: 3702:AT3G11180
uniprot id: A0A654F604
uniprot id: F4J670
uniprot id: Q9SRM3
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: 2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway (PubMed:28559313). Converts JA to 12-hydroxyjasmonate (12OH-JA), an inactive form of JA (PubMed:28559313). Prevents over-accumulation of JA and indirectly its bioactive form JA-Ile under stress response (PubMed:28559313). Acts as negative regulator of JA-mediated defense signaling, by contributing to 12OH-JA accumulation, which represses JA defense responses upon infection by the fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae (PubMed:28559313).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed during pollen germination and pollen tube growth.
messages: Induced at low levels by wounding (PubMed:28760569). Induced by methyl jasmonate (MeJA), infection by the fungal pathogen Botrytis cinerea and infestation with the caterpillar Mamestra brassicae (PubMed:28559313).
messages: The quadruple mutant jox1, jox2, jox3 and jox4 exhibit reduced root and shoot growth, delayed flowering, reduced seed production, constitutively elevated jasmonate and jasmonoyl-L-isoleucine levels, and enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae.

3702:AT1G26740
gene id: 3702:AT1G26740
uniprot id: Q944L5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

3702:AT1G11510
gene id: 3702:AT1G11510
uniprot id: A0A1P8AVW9
uniprot id: A0A654E914
uniprot id: C0SUU6
names: Similarity
messages: Belongs to the GeBP family.

3702:AT3G54850
gene id: 3702:AT3G54850
uniprot id: Q8VZ40
names: Domain
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed in flowers, green siliques, seeds and rosette leaves.
messages: Functions as an E3 ubiquitin ligase with specific E2 ubiquitin-conjugating enzymes. Undergoes auto-ubiquitination.
messages: Homodimer (Probable). Interacts with SNL1. Binds to SD11, SD16, SD17, SD18, SD113, SD129 and SD25.
messages: The U-box N-terminal domain (UND) is not required for in vitro ubiquitination activity.

3702:AT4G04955
gene id: 3702:AT4G04955
uniprot id: A0A1P8B436
uniprot id: Q94AP0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Carboxylation allows a single lysine to coordinate two zinc ions.
messages: Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoate by hydrolytic cleavage of the five-member hydantoin ring. Catalyzes the first step of the ureide allantoin degradation followed by the sequential activity of AAH, UGLYAH and UAH which allows a complete purine breakdown without the intermediate generation of urea.
messages: Homotetramer.
messages: In Arabidopsis the intermediary metabolite allantoin plays a role in abiotic stress tolerance via activation of abscisic acid (ABA) metabolism.
messages: No visible phenotype under normal growth conditions, but mutant plants are unable to grow on a medium containing allantoin as the sole nitrogen source, accumulate allantoin and have increased tolerance to drought and osmotic stresses.

3702:AT1G64390
gene id: 3702:AT1G64390
uniprot id: A0A5S9WPP8
uniprot id: Q42059
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.
messages: Secreted

3702:AT5G47570
gene id: 3702:AT5G47570
uniprot id: Q9FGK0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Belongs to the complex I NDUFB8 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane

3702:AT1G49160
gene id: 3702:AT1G49160
uniprot id: Q8LST2
names: Caution
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.
messages: May be due to exon skipping.
messages: May regulate flowering time by modulating the photoperiod pathway.
messages: Was named WNK/'with no lysine(K)' because key residues for catalysis, including the lysine involved in ATP binding, are either not conserved or differ compared to the residues described in other kinase family proteins.

3702:AT3G55320
gene id: 3702:AT3G55320
uniprot id: Q9M3B9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT3G18165
gene id: 3702:AT3G18165
uniprot id: A0A5S9XDG9
uniprot id: Q949S9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SPF27 family.
messages: Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Involved in mRNA splicing.
messages: Component of the multiprotein assembly MOS4-associated complex (MAC) at least composed of MOS4, CDC5 and PRL1 (PubMed:19629177). Interacts with CYCL1-1 and CDC5 (PubMed:22248079). Associated with the spliceosome (PubMed:22248079). Interacts with ENY2 (PubMed:29588169).
messages: Enhanced susceptibility to virulent and avirulent pathogens.
messages: Nucleus

3702:AT3G42950
gene id: 3702:AT3G42950
uniprot id: A0A384KX16
uniprot id: Q9M1L0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G39540
gene id: 3702:AT4G39540
uniprot id: A0A178UTT0
uniprot id: F4JW33
uniprot id: Q8GY88
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the shikimate kinase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
messages: Inactivated by heat (37 degrees Celsius).
messages: Monomer.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT1G22810
gene id: 3702:AT1G22810
uniprot id: A0A654EC91
uniprot id: O80542
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G45580
gene id: 3702:AT3G45580
uniprot id: Q9M1E9
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT2G36370
gene id: 3702:AT2G36370
uniprot id: Q8S8F2
names: Caution
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Was originally thought to contain a F-box domain.

3702:AT1G10960
gene id: 3702:AT1G10960
uniprot id: A0A178WLN7
uniprot id: O04090
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Expressed in leaves. Not detected in roots.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: chloroplast

3702:AT5G20960
gene id: 3702:AT5G20960
uniprot id: Q7G193
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aldehyde oxidases (AO) are homodimers and heterodimers of AO subunits. AO-alpha is an AAO1 homodimer; AO-beta is an AAO1-AAO2 heterodimer.
messages: Belongs to the xanthine dehydrogenase family.
messages: Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.
messages: Binds 2 [2Fe-2S] clusters.
messages: Cytoplasm
messages: In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. AO-alpha may be involved in the biosynthesis of auxin, and in biosynthesis of abscisic acid (ABA) in seeds. In vitro, AO-alpha uses heptaldehyde, protocatechualdehyde, benzaldehyde, indole-3-aldehyde (IAld), indole-3-acetaldehyde (IAAld), cinnamaldehyde and citral as substrates; AO-beta uses IAAld, IAld and naphtaldehyde as substrates.
messages: Predominantly expressed in roots, seedlings, mature siliques and seeds, and to lower extent in stems and rosettes. In seedlings, mostly expressed in lower part of hypocotyls and roots.
messages: Strongly inhibited by iodoacetate and potassium cyanide (KCN). Weakly inhibited by 2-mercaptoethanol, dithiothreitol (DTT), menadione, estradiol, 4'-(9-acridinylamino)methanesulfon-m-anisidine (mAMSA), allopurinol and tritonX-100. Not affected by p-chloromercuribenzoate.

3702:AT2G17480
gene id: 3702:AT2G17480
uniprot id: A0A654EV60
uniprot id: O22757
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT4G26740
gene id: 3702:AT4G26740
uniprot id: A0A178V1E1
uniprot id: O81270
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the caleosin family.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group.
messages: Calcium-binding peroxygenase involved in the degradation of storage lipid in oil bodies. May be involved in the interaction between oil bodies and vacuoles during seed germination and in the oxylipin signaling pathways and plant defense responses. Can catalyze sulfoxidation of thiobenzamide, hydroxylation of aniline, epoxidation of oleic acid or intramolecular oxygen transfer.
messages: Expressed during the early-to-late cotyledon stage of seed maturation.
messages: Expressed in seeds. Expression restricted to the developing embryo with enhanced expression in both the protoderm and vasculature. Detected in root tip cells throughout development.
messages: Homodimer.
messages: Inhibited by beta-mercaptoethanol and the organophosphorothioate terbufos.
messages: Lipid droplet
messages: Microsome membrane
messages: No visible phenotype, but retarded growth during the first 48 hours after germination.
messages: Not induced by abscisic acid or osmotic stress.
messages: Phosphorylated. Partially phosphorylated at Ser-225, but not phosphorylated at Ser-72, Tyr-145, Thr-166 or Ser-172. Phosphorylation is not required for catalytic activity.
messages: The proline-knot motif (118-127) may be involved in targeting to lipid bodies.
messages: Transmembrane regions are predicted by sequence analysis tools, but these regions probably constitute hydrophobic domains associated to phospholipids.

3702:AT1G08840
gene id: 3702:AT1G08840
uniprot id: A0A1P8ASU0
uniprot id: A0A1P8ASY1
uniprot id: A0A5S9TCQ8
uniprot id: F4HXR5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 'Jing he sheng' means fasciated stem in Chinese.
messages: Belongs to the DNA2/NAM7 helicase family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Chromosome
messages: Defective embryo arrested at preglobular/early globular stage with the formation of giant endosperm nuclei (PubMed:15266054). In jhs1, retarded growth, abnormal pattern of shoot apical meristem (SAM) cell division and differentiation, and morphological defects such as fasciation, irregular arrangement of siliques and phyllotaxy, and short roots (PubMed:26951435). Increased sensitivity to DNA damage stress (PubMed:26951435). Increased DNA damage response, including increased expression of genes involved in DNA damage repair and cell cycle regulation, and a higher frequency of homologous recombination (PubMed:26951435). Meristems exhibit a delayed cell cycle progression at the G2 or late S phase, and a misregulation of genes essential for meristem maintenance (PubMed:26951435).
messages: Essential protein required during embryogenesis (PubMed:15266054). Key enzyme involved in DNA replication and damage repair, shoot apical meristem (SAM) maintenance, and development (PubMed:26951435). Involved in Okazaki fragments processing. Possesses different enzymatic activities, such as single-stranded DNA (ssDNA)-dependent ATPase, 5'-3' helicase and endonuclease activities. While the ATPase and endonuclease activities are well-defined and play a key role in Okazaki fragments processing and DSB repair, the 5'-3' DNA helicase activity is atypical: it cannot load onto its tracking strand internally and has an absolute free 5'-end requirement (By similarity).
messages: Key enzyme involved in DNA replication and DNA repair. Involved in Okazaki fragments processing by cleaving long flaps that escape FEN1: flaps that are longer than 27 nucleotides are coated by replication protein A complex (RPA), leading to recruit DNA2 which cleaves the flap until it is too short to bind RPA and becomes a substrate for FEN1. Also involved in 5'-end resection of DNA during double-strand break (DSB) repair by mediating the cleavage of 5'-ssDNA.
messages: Nucleus
messages: Strongly expressed in meristems, including both root and shoot apical meristems (RAM and SAM) (PubMed:26951435). Also present in the vasculature and in young floral tissues (PubMed:26951435).

3702:AT1G31690
gene id: 3702:AT1G31690
uniprot id: F4IAX0
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the copper/topaquinone oxidase family.
messages: Binds 1 copper ion per subunit (By similarity). Can also use zinc ion as cofactor (By similarity).
messages: Contains 1 topaquinone per subunit.
messages: Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:28383668). Involved in putrescine catabolism in peroxisomes in response to salt stress (PubMed:28383668). Regulates arginine-dependent nitric oxide (NO) production, a key signaling molecule regulating a wide range of physiological processes including responses to salt stress, by influencing arginine bioavailability (PubMed:28383668). Modulates primary root growth (PubMed:28383668).
messages: Decreased nitric oxide (NO) production in seedlings after elicitor treatment with 2,6-dichloroisonicotinic acid (INA) in root tips and salt stress associated with a reduced arginine availability but with a normal nitrate reductase activity in plants (PubMed:28383668). Reduced primary root length (PubMed:28383668).
messages: Expressed exclusively in leaves.
messages: Homodimer.
messages: In young seedlings, first observed in hydathodes and borders of new emerging cotyledons and in leaf primordia (PubMed:31862580). Accumulates in expanding leaves (PubMed:31862580).
messages: Induced transiently by auxin (IAA) (PubMed:31862580). Accumulates during dehydration recovery, wounding and treatment with putrescine (Put) and jasmonic acid (MeJA) (PubMed:31862580). Repressed by abscisic acid (ABA) and salicylic acid (SA) (PubMed:31862580).
messages: Peroxisome
messages: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue.

3702:AT3G42170
gene id: 3702:AT3G42170
uniprot id: A0A178VJS5
uniprot id: A0A1I9LLZ3
uniprot id: Q9M2N5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus
messages: Transposase-like protein that is essential for plant growth and development. Binds the promoter region of the DNA helicase KU70 and genes involved in chromatin remodeling. May regulate global gene expression by recruiting other cellular factors.
messages: Very slow growth and absence of expansion of cotyledons or development of normal leaves or floral organs. Short root with an excess of abnormal root hairs. Extremely rare production of some photosynthetic tissue.

3702:AT1G06640
gene id: 3702:AT1G06640
uniprot id: A0A654E9C6
uniprot id: F4IDQ0
uniprot id: Q9C5K7
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT2G13542
gene id: 3702:AT2G13542
uniprot id: Q2V485
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G47730
gene id: 3702:AT2G47730
uniprot id: Q96266
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GST superfamily. Phi family.
messages: By salicylic acid, ethylene, methyl jasmonate, auxin, H(2)O(2), metolachlor, and the pathogen Hyaloperonospora parasitica.
messages: In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB) and glutathione peroxidase activity toward cumene hydroperoxide and linoleic acid-13-hydroperoxide. May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: Isoform 1 is predominantly expressed in leaves and isoform 2 in roots.
messages: chloroplast
messages: cytosol

3702:AT4G35490
gene id: 3702:AT4G35490
uniprot id: A0A384KJP0
uniprot id: Q9SVW7
names: Similarity
messages: Belongs to the universal ribosomal protein uL11 family.

3702:AT2G26160
gene id: 3702:AT2G26160
uniprot id: A0A178W0I3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G09647
gene id: 3702:AT4G09647
uniprot id: Q2V3K1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G46480
gene id: 3702:AT3G46480
uniprot id: F4J937
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT1G13120
gene id: 3702:AT1G13120
uniprot id: Q0WPZ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GLE1 family.
messages: Lethal when homozygous.
messages: Nucleus envelope
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins.
messages: Required for seed viability.
messages: nuclear pore complex

3702:AT3G01015
gene id: 3702:AT3G01015
uniprot id: A0A384K930
uniprot id: Q5XVC4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPX2 family.
messages: Binds directly to microtubules (PubMed:29167353). Microtubule-destabilizing protein involved in the PIF3-dependent positive regulation of hypocotyl cell elongation via the modulation of cortical microtubules dynamic in response to light and ethylene signaling (PubMed:29167353, PubMed:31638649). Promotes submergence-induced and ethylene-dependent underwater hypocotyl elongation (PubMed:31638649).
messages: Induced by ethylene (ACC) via PIF3 binding to its promoter and subsequent transcription regulation (PubMed:29167353). Accumulates upon submergence through ethylene signaling (PubMed:31638649). Repressed by aminoethoxyvinyl-Gly (AVG), an inhibitor of ethylene biosynthesis (PubMed:29167353, PubMed:31638649). Higher levels in light-grown hypocotyls (PubMed:29167353).
messages: Reduced hypocotyls length in light conditions and in response to ethylene due to reduced cell elongation and associated with the disruption of cortical microtubules (PubMed:29167353). Suppressed effects of submergence on hypocotyl elongation and cortical microtubule reorganization (PubMed:31638649).
messages: cytoskeleton

3702:AT5G62810
gene id: 3702:AT5G62810
uniprot id: Q9FXT6
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-14 family.
messages: By wounding and hydrogen peroxide, but not by jasmonate.
messages: Component of the PEX13-PEX14 docking complex, a translocon channel that specifically mediates the import of peroxisomal cargo proteins bound to PEX5 receptor (PubMed:11060021, PubMed:11978862, PubMed:17478547, PubMed:19594707). The PEX13-PEX14 docking complex forms a large import pore which can be opened to a diameter of about 9 nm (By similarity). Mechanistically, PEX5 receptor along with cargo proteins associates with the PEX14 subunit of the PEX13-PEX14 docking complex in the cytosol, leading to the insertion of the receptor into the organelle membrane with the concomitant translocation of the cargo into the peroxisome matrix (By similarity).
messages: Expressed at the early stage of germination and during the conversion of glyoxysomes to peroxisomes.
messages: Expressed in flowers, siliques, leaves and roots.
messages: Interacts with PEX13; forming the PEX13-PEX14 docking complex (By similarity). Interacts with PEX5 (via WxxxF/Y motifs) (PubMed:11978862).
messages: Peroxisome membrane

3702:AT3G18630
gene id: 3702:AT3G18630
uniprot id: A0A178VFQ0
uniprot id: Q9LIH6
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
messages: Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
messages: Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. More active on U:G, U:T and U:C mispairs than on U:A pairs. Highly specific for uracil and no activity with 5-substituted uracil or cytosine derivatives. Required for initiation of base excision repair (BER) of uracil.
messages: Inhidited by the small peptide uracil-DNA-glycosylase inhibitor (Ugi).
messages: Mitochondrion
messages: No visible phenotype under standard growth conditions. Increased resistance to 5-fluorouracil cytotoxicity.
messages: Nucleus

3702:AT3G27785
gene id: 3702:AT3G27785
uniprot id: Q9LVW4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in embryos from the early heart stage and throughout embryogenesis (PubMed:18695688, PubMed:19066902). Induced at the onset of the maturation phase in the endosperm, in a high and homogeneous repartition (PubMed:18695688, PubMed:19066902, PubMed:25194028, PubMed:27681170).
messages: Induced by LEC2.
messages: Mainly expressed in siliques (PubMed:18695688, PubMed:19066902). Also detected at low levels in leaves and flowers (PubMed:19066902).
messages: Nucleus
messages: Single and myb118 myb115 double mutants do not show apparent developmental abnormalities (PubMed:18695688, PubMed:25194028). Reduced omega-7 fatty acids accumulation in the endosperm. The endosperm oil of double mutant myb115 myb118 lacks omega-7 fatty acids (PubMed:27681170). Endosperm-specific derepression of maturation-related genes associated with a partial relocation of storage compounds from the embryo to the endosperm (PubMed:25194028).
messages: Transcription activator that recognizes the motif 5'-TAACGG-3' in the promoter of endosperm-induced genes (PubMed:27681170, PubMed:25194028, PubMed:19066902). Promotes vegetative-to-embryonic transition and the formation of somatic embryos from root explants in a WUS-independent manner but via the expression of embryonic genes (e.g. LEC1, LEC2, FUS3 and WUS) (PubMed:18695688). May play an important role during embryogenesis and seed maturation (PubMed:19066902, PubMed:25194028). Together with MYB115, activates the transcription of S-ACP-DES2/AAD2 and S-ACP-DES3/AAD3 thus promoting the biosynthesis of omega-7 monounsaturated fatty acid in seed endosperm (PubMed:27681170). Regulates negatively maturation genes in the endosperm (PubMed:25194028).

3702:AT5G06940
gene id: 3702:AT5G06940
uniprot id: Q9FL51
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive. Lacks the conserved Asp active site at position 712, which is replaced by an Asn residue.

3702:AT2G29970
gene id: 3702:AT2G29970
uniprot id: O80875
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ClpA/ClpB family.
messages: Contains 1 EAR motif required for the interaction with TPR2.
messages: Expressed in axillary branches and roots. Detected in seedlings and leaves (PubMed:23893171). Expressed in the primary rosette buds and expanding leaves of adult rosettes, the vasculature of the hypocotyls, cotyledons, and mature roots, and in the midvein and petioles of young leaves (PubMed:26546447).
messages: Interacts with TPL/TPR in an EAR-motif dependent manner (PubMed:26546447). Interacts with TPL, TPR1, TPR2 and TPR4 (PubMed:26546447). Interacts with MAX2 and TPR2 (PubMed:26546446). Interacts with D14 (PubMed:26546446, PubMed:25713176). The interaction with D14 occurs in the presence of (2'R) stereoisomers of strigolactones, but not (2'S) stereoisomers (PubMed:25713176).
messages: No visible phenotype. Suppresses max2 phenotypes associated with strigolactone-D14-regulated growth. Smxl7 and max2 double mutants have reduced branching and increased inflorescence heights compared with max2 mutants.
messages: Nucleus
messages: Probable component of a transcriptional corepressor complex involved in branching control. Regulates cotyledon expansion and lateral root growth, but not germination or hypocotyl elongation. Promotes auxin transport and PIN1 accumulation in the stem and represses BRC1/TCP18 expression in axillary buds (PubMed:26546447, PubMed:26546446).
messages: Ubiquitinated upon strigolactone treatment. Strigolactone, but not karrikin, triggers rapid SCF(MAX2)-dependent degradation (PubMed:26546447, PubMed:26546446).
messages: Up-regulated by strigolactone treatment.

3702:AT4G20330
gene id: 3702:AT4G20330
uniprot id: A0A178UVI2
uniprot id: Q9SUP3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFIIE beta subunit family.
messages: Nucleus
messages: Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
messages: Tetramer of two alpha and two beta chains.

3702:AT5G06811
gene id: 3702:AT5G06811
uniprot id: A0A1P8BG52
names: Similarity
messages: Belongs to the mTERF family.

3702:AT2G36830
gene id: 3702:AT2G36830
uniprot id: P25818
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
messages: By gibberellins.
messages: In all the vegetative organs, but not in seeds. Preferentially expressed in roots.
messages: Interacts with cucumber mosaic virus (CMV) Protein 1a.
messages: Plants display lesion formation or plant death, and low contents of glucose, fructose, inositol, and threonic, succinic, fumaric, and malic acids.
messages: Vacuole membrane
messages: Water channel required to facilitate the transport of water, diffusion of amino acids and/or peptides from the vacuolar compartment to the cytoplasm. Does not promote glycerol permeability. May play a role in the control of cell turgor and cell expansion. Its function is impaired by Hg(2+). May be involved in a vesicle-based metabolite routing through or between pre-vacuolar compartments and the central vacuole. Transports urea in yeast cells in a pH-independent manner. Transports H(2)O(2) in yeast cells.

3702:AT3G09390
gene id: 3702:AT3G09390
uniprot id: A0A178VGL7
uniprot id: P25860
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Abundant in leaves, inflorescences and roots of mature plants. Also detected in roots of young plants, and in siliques (PubMed:7565594). Expressed in leaf mesophyll cells, filaments, stigma and tips of elongating lateral roots (Ref.8).
messages: Belongs to the metallothionein superfamily. Type 15 family.
messages: Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Functions as metal chelator of copper (Cu) and zinc (Zn) (PubMed:18287486). Plays a role in Cu homeostasis, specifically in the remobilization of Cu from senescing leaves. The mobilization of Cu from internal sources is important for seed development (PubMed:24635746).
messages: Metallothioneins have a high content of cysteine residues that bind various heavy metals.
messages: Strongly induced in seedlings by CuSO4.

3702:AT5G64030
gene id: 3702:AT5G64030
uniprot id: Q8L7V3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane

3702:AT4G19380
gene id: 3702:AT4G19380
uniprot id: A0A1P8B6G2
uniprot id: O65709
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GMC oxidoreductase family.
messages: Long-chain fatty alcohol oxidase involved in the omega-oxidation pathway of lipid degradation.
messages: Membrane

3702:AT1G08410
gene id: 3702:AT1G08410
uniprot id: Q9SJF1
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family.
messages: Cytoplasm
messages: GTPase involved in ribosome biogenesis (Probable). Binds to 23S rRNA and associates with 60S pre-ribosomes (PubMed:25319368). Involved in early cotyledon and leaf development (PubMed:25319368).
messages: In contrast to other GTP-binding proteins, this family is characterized by a circular permutation of the GTPase motifs described by a G4-G1-G3 pattern.
messages: No effect on the association with 60S pre-ribosomes, but altered rRNA processing and accumulation of 18S rRNA precursors (PubMed:25319368). Embryo and leaf developmental defects (PubMed:25319368). Severe delay in development of the first true rosette leaves and frequent fused or triple cotyledons (PubMed:25319368). Lsg1-1 and lsg1-2 double mutants are lethal, when homozygous (PubMed:25319368).
messages: Nucleus
messages: The DARXP motif is also sometime designated as G6 region.
messages: Ubiquitous, with the highest expression in reproductive and strongly dividing tissues.

3702:AT4G16510
gene id: 3702:AT4G16510
uniprot id: A0A178URU7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G66050
gene id: 3702:AT1G66050
uniprot id: Q680I0
names: Disruption Phenotype
names: Domain
names: Function
names: Sequence Caution
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Decreased DNA methylation primarily at CpG sites in genic regions, as well as repeated sequences in heterochromatic regions. Released transcriptional silencing at heterochromatin regions. Ectopic CpHpH methylation in the 5S rRNA genes against a background of CpG hypomethylation.
messages: E3 ubiquitin-protein ligase. Participates in CpG methylation-dependent transcriptional regulation and epigenetic transcriptional silencing. Mediates ubiquitination with the E2 ubiquitin-conjugating enzyme UBC11.
messages: Expressed in inflorescences.
messages: Nucleus
messages: Sequencing or cloning errors.
messages: The RING fingers are required for ubiquitin ligase activity.
messages: The YDG domain mediates the interaction with histone H3.

3702:AT1G71940
gene id: 3702:AT1G71940
uniprot id: A0A178WAG5
uniprot id: F4IBM1
uniprot id: Q9C8W8
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G16970
gene id: 3702:AT3G16970
uniprot id: Q3EB54
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G25470
gene id: 3702:AT2G25470
uniprot id: Q9SKK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT5G49880
gene id: 3702:AT5G49880
uniprot id: A0A178UP86
uniprot id: Q9LTY1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MAD1 family.
messages: Homodimer. Part of the mitotic checkpoint complex (MCC). Interacts with MAD2 and NUA.
messages: Nucleus envelope
messages: Required for the execution of the mitotic checkpoint which monitors the process of kinetochore-spindle attachment and delays the onset of anaphase when this process is not complete. It inhibits the activity of the anaphase promoting complex by sequestering CDC20 until all chromosomes are aligned at the metaphase plate. Required for anchoring MAD2 to the nuclear envelope.

3702:AT1G22190
gene id: 3702:AT1G22190
uniprot id: A0A5S9VJQ6
uniprot id: Q9LM15
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Interacts with BTB/POZ-MATH proteins BPM1 and BPM3.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G09330
gene id: 3702:AT5G09330
uniprot id: Q9FY82
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the epidermal cells of the root apical region.
messages: Interacts with NAC030/VND7.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes.

3702:AT5G50260
gene id: 3702:AT5G50260
uniprot id: Q9FGR9
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase C1 family.
messages: Endoplasmic reticulum
messages: Expressed in roots, stems, flowers, buds and green siliques. Found within columella, lateral root cap cells, and in the endodermis, the cortex and the epidermis during lateral root formation. Expressed in the abscission zones of the flower organs.
messages: Expressed when organs wither and separate from the fruit or the green silique. Expressed in unpollinated, degrading ovules (PubMed:21632425). Expressed specifically in the tapetum from stages 5 to 11 of anther development (PubMed:25035401).
messages: Inhibited by leupeptin and the cysteine protease inhibitor E64 (L-trans-epoxysuccinyl-leucylamide-(4-guanido)-butane).
messages: Possesses protease activity in vitro (PubMed:25035401). Involved in the final stage of developmental programmed cell death and in intercalation of new cells. Cleaves extensins, thus probably supporting the final cell collapse (PubMed:21632425). During the compatible interaction with the biotrophic powdery mildew fungus Erysiphe cruciferarum, involved in the control of late epidermal cell death that limits growth and susceptibility to the parasite (PubMed:24605116). During anther development, involved in tapetal programmed cell death (PCD), leading to degeneration of tapetal cells and functional pollen formation (PubMed:25035401).
messages: Reduced male fertility due to impaired pollen development and abnormal pollen exine (PubMed:25035401). Enhanced susceptibility to powdery mildew caused by the biotrophic ascomycete Erysiphe cruciferarum (PubMed:24605116).
messages: Vacuole

3702:AT5G54760
gene id: 3702:AT5G54760
uniprot id: A0A384LKP8
uniprot id: Q9FFV1
names: Function
names: Similarity
messages: Belongs to the SUI1 family.
messages: Probably involved in translation.

3702:AT1G75910
gene id: 3702:AT1G75910
uniprot id: A0A178WJM0
uniprot id: Q0WUV7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Flower buds and pollen.
messages: Reduced pollen fertility. Pollen grain exhibit a partial formation of coat and impaired water absorption and germination capacities.
messages: Required for the formation of pollen coats and male fertility.
messages: Strongly expressed in tapetal cells at the flower developmental stage 10 to middle 12, where the components of pollen coat are synthesized actively.
messages: pollen coat

3702:AT4G13760
gene id: 3702:AT4G13760
uniprot id: F4JTS9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G12770
gene id: 3702:AT4G12770
uniprot id: Q0WQ57
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Promotes probably uncoating of clathrin-coated vesicles.

3702:AT4G39740
gene id: 3702:AT4G39740
uniprot id: A0A178V000
uniprot id: Q8LAL0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SCO1/2 family.
messages: Expressed in the whole plant with highest expression in imbibed seeds and embryos, and the root hair zone.
messages: Mitochondrion inner membrane
messages: No visible phenotype.
messages: Thought to play a role in cellular copper homeostasis, mitochondrial redox signaling or insertion of copper into the active site of COX (By similarity). Participates in copper and redox homeostasis.

3702:AT3G56660
gene id: 3702:AT3G56660
uniprot id: Q9LXX4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bZIP family.
messages: Endoplasmic reticulum membrane
messages: Interacts with BZIP28.
messages: Nucleus
messages: Transcriptional activator involved in stress responses.

3702:AT2G31650
gene id: 3702:AT2G31650
uniprot id: Q9C5X4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated via O-glycosylation by SEC; this modification triggers FLC locus H3K4me3 histone modification, thus preventing premature flowering.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
messages: Binds to the promoter and regulates the transcription of target genes, maintaining them in an active state; at promoters, required for TATA binding proteins (TBPs, e.g. TBP1 and TBP2) and RNA polymerase II (Pol II) recruitment, and, in a subsequent event, is recruited by a phosphorylated form of Pol II to the +300-bp region of transcribed sequences to trimethylates nucleosomes (PubMed:21266657, PubMed:23284292). Histone trimethyltransferase that trimethylates 'Lys-4' of histone H3 (H3K4me3); H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation and is required for efficient elongation of transcription but not for transcription initiation (PubMed:17965588, PubMed:17881378, PubMed:18375658, PubMed:23284292). Methylates only a limited fraction of nucleosomes of target genes (e.g. FLC, NAP, XTH33 and WRKY70) (PubMed:18375658). Necessary for WDR5A occupancy at WRKY70 and LTP7 genes (PubMed:23284292). Required to maintain the active state of class A (AP1 and AP2), class B (PI and AP3) and class C (AG, AGAMOUS) floral homeotic genes at early stages of flower development (PubMed:17881378). Together with CLF, modulates AG nucleosome methylation statement (PubMed:17881378). Involved in epigenetic regulation (e.g. H3K4me3) of the floral repressors FLC, FT and SOC1 to prevent the transition from vegetative to reproductive development, independently of the photoperiod; binds the active FLC locus before flowering, but this interaction is released upon the transition to flowering (PubMed:18375656, PubMed:24102415, PubMed:30150325). Regulates floral organ identity and flowering transition. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity. Exhibits histone methylase activity and subsequent transcriptional regulation on WRKY70 gene, and, to a lower extent on secondary defense-response targets salicylic acid (SA)-responsive gene PR1 and jasmon…
messages: Cytoplasm
messages: Decreased germination rates, larger stomatal apertures, more rapid transpiration and decreased tolerance to dehydration stress in atx1 plants partly due to reduced ABA biosynthesis as a result of decreased NCED3 transcript levels (PubMed:21309869). Reduced trimethylated 'Lys-4' histone H3 (H3K4me3) but normal dimethylated 'Lys-4' histone H3 (H3K4me2) at NAP, XTH33, NCED3, LTP and WRKY70 nucleosomes leading to decreased transcript levels in atx1 plants (PubMed:18375658, PubMed:21266657). Lower Pol II phosphorylation (e.g. Ser5P and Ser2P) and TBP (e.g. TBP1 and TBP2) occupancy at the promoters of NCED3, LTP and WRKY70 associated with reduced gene expression (PubMed:21266657). Strongly reduced occupancy of WDR5A at WRKY70 and LTP7 genes (PubMed:23284292). Accelerated transition from vegetative to reproductive development, under both long-day and short-day conditions, especially in medium-day conditions (12 hours light / 12 hours dark), due to FLC, FT and SOC1 epigenetic misregulation; specific depletion in H3K4me3 but increased H3K27me2 associated with reduced FLC, FT and SOC1 levels (PubMed:18375656, PubMed:21245040, PubMed:24102415). Misexpression of AGAMOUS, recognizable phenotypes (e.g. small and slightly serrated leaves, and early flowering time) and loss of H3K4me3 histone H3-tail marks (PubMed:17881378). Impaired in primary root growth with irregular shape and expanded quiescent center (QC) cells (PubMed:25205583). Ectopic expression of QC-specific markers (e.g. QC46, WOX5 and SCR) in the primary RAM and in the developing lateral root primordia (PubMed:25205583). Lack of coordination between cell division and cell growth leading to atypical distribution of T-divisions, the presence of oblique divisions, and abnormal cell patterning in the root apical meristem (RAM) (PubMed:25205583). Reduced lateral root (LR) density within the branching zone (PubMed:25205583). Altered transcription levels of target genes, including several endomembrane and cell wall-associated…
messages: Expressed in young seedlings (PubMed:21245040). Later in development, confined to cells at attachment sites of organ to stems (PubMed:21245040).
messages: Expression is associated with the initiation of flower organs and ovules (PubMed:12699618, PubMed:18375658). Accumulates in the tissues of young seedlings but also in adult plants (PubMed:18375658, PubMed:21245040). In flowers, present in sepals, in the vasculature of petals, and in the filaments of the stamens and, at low levels, at the tips of the stigma (PubMed:18375658). In seedlings, observed in the vasculature of the cotyledons, hypocotyls, stems, and the first pair of leaves (PubMed:18375656, PubMed:21245040). Just prior to flowering, a strong reduction in expression levels occurs in the vasculature (PubMed:18375656).
messages: Interacts with A4/EF1A in the cytoplasm on the nuclear periphery.
messages: Interacts with PIP5 (PubMed:16585509). Interacts with WDR5A (PubMed:19567704, PubMed:23284292). Binds to CLF in the nucleus (PubMed:17881378). Interacts with NRPB1 CTD domain, especially when NRPB1 is phosphorylated on 'Ser-5' of the heptapeptide repeat (PubMed:21266657). Component of a nuclear protein complex containing at least TATA binding proteins (TBPs, e.g. TBP1 and TBP2) and ATX1 (PubMed:21266657). Associates with ULT1 for trimethylating 'Lys-4' on histone H3 (H3K4me3) at flower MADS box gene loci (PubMed:23632855). Interacts with SEC (PubMed:30150325).
messages: Nucleus
messages: Precocious flowering, asymmetric rosettes, aberrant flowers and chlorosis (PubMed:21245040). Dramatically different pattern of reduced actin bundles and absent actin transvacuolar cytoplasmic strands (TVSs) (PubMed:21245040).
messages: Strongly expressed in cotyledons, but weak levels in the first true leaves, except at the hydothodes (PubMed:21245040). Ubiquitous with higher levels in dividing tissues, including inflorescence meristem and flower primordia (PubMed:11418242, PubMed:12699618, PubMed:18375658). Expressed also in leaves (especially at hydathodes), in growing inflorescence stems and in the mature flowers (PubMed:18375658).
messages: Strongly expressed in young seedlings.
messages: Trimethylates A4/EF1A post-translationally at Lys-396 (PubMed:21245040). Required for actin cytoskeleton organization (PubMed:21245040).
messages: perinuclear region

3702:AT1G02620
gene id: 3702:AT1G02620
uniprot id: Q3E6Q3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. SAR1 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Involved in transport from the endoplasmic reticulum to the Golgi apparatus.

3702:AT1G27520
gene id: 3702:AT1G27520
uniprot id: Q9SXC9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 47 family.
messages: Can convert Man(9)GlcNAc(2) and Man(8)GlcNAc(2) into N-glycans with a terminal alpha-1,6-linked Man residue in the C-branch. Functions in the formation of unique N-glycan structures that are specifically recognized by components of the endoplasmic reticulum-associated degradation (ERAD) machinery, which leads to the degradation of misfolded glycoproteins. Most likely generates N-glycan signal on misfolded glycoproteins that is subsequently recognized by OS9. Required for ERAD of the heavily glycosylated and misfolded BRI1 variants BRI1-5 and BRI1-9. Does not seem to play role in N-glycan processing of correctly folded proteins destined for secretion.
messages: Endoplasmic reticulum membrane

3702:AT5G47770
gene id: 3702:AT5G47770
uniprot id: Q09152
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.
messages: Cytoplasm
messages: Mitochondrion
messages: The FPS1L mRNA accumulates preferentially in inflorescences, whereas the FPS1S mRNA is predominantly expressed in roots and inflorescences.

3702:AT3G27720
gene id: 3702:AT3G27720
uniprot id: Q9LVW9
names: Caution
names: Cofactor
names: Domain
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: Could be the product of a pseudogene.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT3G09440
gene id: 3702:AT3G09440
uniprot id: A0A178VI76
uniprot id: O65719
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.
messages: By heat shock and by cold. Up-regulated by virus infection.
messages: Cytoplasm
messages: Down-regulated during seed maturation. Up-regulated during germination.
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions.
messages: Interacts with GDP-mannose 3,5-epimerase and SGT1B (via SGS domain). Binds to the deubiquitinating enzyme AMSH3. Interacts with WPP1. Interacts with DEK3 (PubMed:25387881).
messages: Nucleus matrix

3702:AT3G26940
gene id: 3702:AT3G26940
uniprot id: A0A178VIM3
uniprot id: Q9LSE1
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by phosphorylation at Ser-234.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed at high levels in the stamen and pollen grains (PubMed:21855796). Expressed at a very low level in vegetative tissues (PubMed:15466232, PubMed:21855796).
messages: Interacts with BSU1, BSL1 and BRI1.
messages: No visible phenotype under normal growth conditions.
messages: Phosphorylated at Ser-44, Ser-47 and Ser-234 by BRI1.
messages: Serine/threonine-protein kinase involved in the positive regulation of brassinosteroid (BR) signaling and plant growth. Mediates BR signal transduction from BRI1 receptor kinase to BSU1 phosphatase. After activation by phosphorylation at Ser-234 by BRI1, CDG1 phosphorylates BSU1 at 'Ser-764' in the phosphatase domain, increasing the ability of BSU1 to inactivate the negative regulator of BR signaling ASK7/BIN2 by dephosphorylation at 'Tyr-200'. The full kinase activity of CDG1 is required for its biological function.
messages: The gain of function mutants cdg1-D (T-DNA tagging) show pleiotropic phenotype such as dwarfism, exaggerated leaf epinasty and twisted or spiral growth in hypocotyl, inflorescence stem, and petiole.

3702:AT1G14770
gene id: 3702:AT1G14770
uniprot id: A0A178WG30
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G43650
gene id: 3702:AT5G43650
uniprot id: A0A1P8BB16
uniprot id: Q9FIX5
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT2G23200
gene id: 3702:AT2G23200
uniprot id: O22187
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT2G07672
gene id: 3702:AT2G07672
uniprot id: P92539
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07672) is demonstrated.
messages: Mitochondrion

3702:AT1G60815
gene id: 3702:AT1G60815
uniprot id: A0A654EJR8
uniprot id: A8MRD4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT4G36900
gene id: 3702:AT4G36900
uniprot id: A0A178V109
uniprot id: Q9SW63
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G47740
gene id: 3702:AT1G47740
uniprot id: A0A384KDS9
uniprot id: Q8RXP3
names: Similarity
messages: Belongs to the DeSI family.

3702:AT1G79150
gene id: 3702:AT1G79150
uniprot id: A0A654EQ96
uniprot id: F4IDJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CBF/MAK21 family.
messages: Component of nucleolar complexes (PubMed:30338215). Interacts with RBL and NOC2 in both the nucleolus and nucleoplasm (PubMed:30338215).
messages: May be required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm (By similarity). Also required for initiation of DNA replication (PubMed:17556508).
messages: Nucleus
messages: nucleolus
messages: nucleoplasm

3702:AT4G09820
gene id: 3702:AT4G09820
uniprot id: Q9FT81
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bHLH protein family.
messages: Buds, flowers and developing siliques, but not in leaves, stems and roots.
messages: Faint expression in buds and flowers. Increases during the very early stages of seed development, reaches a maximum at the globular embryo stage and stays high throughout seed formation.
messages: Homodimer (Probable). Interacts with MYB4, MYB5, MYB6, MYB82, MYB113, MYB114, MYB75/PAP1, MYB90/PAP2, and TT2.
messages: Nucleus
messages: TT8 might interact with TT2 and TTG1 to modulate the late genes of the flavonoid pathway.
messages: Transcription activator, when associated with MYB75/PAP1 or MYB90/PAP2. Involved in the control of flavonoid pigmentation. Plays a key role in regulating leucoanthocyanidin reductase (BANYULS) and dihydroflavonol-4-reductase (DFR). Not required for leucoanthocyanidin dioxygenase (LDOX) expression.

3702:AT1G66780
gene id: 3702:AT1G66780
uniprot id: A0A178W985
uniprot id: F4HQ05
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT5G24960
gene id: 3702:AT5G24960
uniprot id: P58045
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G16880
gene id: 3702:AT1G16880
uniprot id: A0A178WLF3
uniprot id: F4I613
uniprot id: Q9FZ47
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds amino acids.
messages: By light.
messages: Expressed in cotyledons, rosette leaves, stems, sepals, style, and tip of pedicel in mature siliques.
messages: May be involved in feedback regulation of amino acid metabolism. May be involved in the regulation of glutamine metabolism.
messages: chloroplast

3702:AT1G01360
gene id: 3702:AT1G01360
uniprot id: A0A178W4H4
uniprot id: Q84MC7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in root tips, vascular tissues, stomata, flowers, pollen tubes and developing seeds.
messages: Homodimer (PubMed:24645846). Monomer (PubMed:21658606). Binds ABA on one subunit only. Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Binds specifically (+)-ABA but not (-)-ABA (PubMed:23844015, PubMed:24645846). Interacts with HAB1, ABI1 and ABI2, and possibly with other PP2Cs (PubMed:19407142, PubMed:19407143, PubMed:19874541). Interacts with TOPP1 (PubMed:26943172). Interacts with DDA1 (PubMed:24563205).
messages: Membrane
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) in an ABA-independent manner but more efficiently when activated by ABA. Confers enhanced sensitivity to ABA (PubMed:19407143, PubMed:23844015, PubMed:21658606). Can be activated only by (+)-ABA but not by (-)-ABA (PubMed:23844015).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT1G07390
gene id: 3702:AT1G07390
uniprot id: F4HQM4
uniprot id: F4HQM5
uniprot id: Q9LNV9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in plant defense. Confers resistance to the bacterial pathogen Xanthomonas through recognition of the microbe-associated molecular pattern (MAMP) eMax (PubMed:23898033, PubMed:24384530). Functionality seems to depend on the presence of the receptor kinase SOBIR1 as an adapter protein (PubMed:24384530).
messages: Lack of responsiveness to MAMP eMax from Xanthomonas.
messages: Membrane

3702:AT1G13920
gene id: 3702:AT1G13920
uniprot id: A0A1P8AQT9
uniprot id: A0A1P8AR05
uniprot id: Q9XI94
names: Similarity
messages: Belongs to the remorin family.

3702:AT5G60680
gene id: 3702:AT5G60680
uniprot id: A0A178URJ1
uniprot id: Q9FF51
names: Similarity
messages: Belongs to the senescence regulator S40 family.

3702:AT3G18600
gene id: 3702:AT3G18600
uniprot id: A0A178V8H1
uniprot id: Q9LIH9
names: Domain
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX18/HAS1 subfamily.
messages: RNA helicase.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT3G09260
gene id: 3702:AT3G09260
uniprot id: A0A178VCN3
uniprot id: Q9SR37
names: Activity Regulation
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by tissue damage and upon binding to PBP1 or PBP2.
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Beta-D-glucosidase active on scopolin > esculin >> 4-MU-glucoside >> DIMBOA-glucoside. No activity with pNP-glucoside, oNP-glucoside and sinigrin as substrates. May possess beta-D-fucosidase activity. Required for the beneficial interaction with the endophytic fungus P.indica. May participate in the control of root colonization by P.indica by repressing defense responses and modulating other responses required for a mutualistic interaction.
messages: Endoplasmic reticulum lumen
messages: Expressed exclusively in roots.
messages: Forms interchain disulfide bonds.
messages: Homodimers. Binds to the deubiquitinating enzyme AMSH3. The inactive form interacts with PBP1/JAL30 to form the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.
messages: Up-regulated by wounding, 2,4-D and methyl jasmonate (MeJA). Down-regulated by salt and mannitol.

3702:AT2G24940
gene id: 3702:AT2G24940
uniprot id: Q9SK39
names: Domain
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome b5 family. MAPR subfamily.
messages: Down-regulated by auxin and cytokinin.
messages: Nucleus
messages: The cytochrome b5 heme-binding domain lacks the conserved iron-binding His residues at positions 37 and 61.

3702:AT4G24560
gene id: 3702:AT4G24560
uniprot id: A0A178V7D3
uniprot id: Q9SB51
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase C19 family.
messages: Exhibits reduced salt tolerance. Reduced shoot growth in response to salt stress.
messages: Expressed in flowers, siliques, rosette leaves, cauline leaves, stems and at a lower level in roots. In roots, expressed in the sieve elements.
messages: Interacts with SHM1 and SHM4 (PubMed:23232097). Interacts with HIPP27 (PubMed:23857362).
messages: Membrane
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Involved in salt tolerance by modulating sodium transport activity and repressing cell death at least partially through modulating SHM1 stability and activity (PubMed:23232097). Involved in cadmium tolerance by interacting with HIPP27 and probably modulating its stability (PubMed:23857362).
messages: Regulated by the transcription factors NAC045 and NAC086 and up-regulated by salt stress.

3702:AT4G15620
gene id: 3702:AT4G15620
uniprot id: A0A178V4A8
uniprot id: O23413
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT5G63950
gene id: 3702:AT5G63950
uniprot id: Q8W103
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SNF2/RAD54 helicase family.
messages: DNA helicase that acts as an essential component of the spindle assembly checkpoint (By similarity). Probable chromatin remodeling factor that regulate homologous recombination (HR) and non-homologous recombination (NHR).
messages: Nucleus

3702:AT2G42120
gene id: 3702:AT2G42120
uniprot id: F4IM00
uniprot id: O48520
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase delta/II small subunit family.
messages: Heterodimer with subunits of 125 kDa and 50 kDa.
messages: Nucleus
messages: The function of the small subunit is not yet clear.

3702:AT3G22790
gene id: 3702:AT3G22790
uniprot id: Q9LUI2
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NET family.
messages: Cell membrane
messages: Expressed in root meristems and at very low levels throughout mature vasculature.
messages: Interacts with F-actin.
messages: No visible phenotype, due to the redundancy with NET1B. Net1a and net1b double mutant shows a significant acceleration in root-cell expansion.
messages: Plant-specific actin binding protein. Associates with F-actin at the plasma membrane and plasmodesmata. May be part of a membrane-cytoskeletal adapter complex.
messages: The NAB domain, also called NAB (NET actin-binding) domain, is sufficient for F-actin binding.
messages: cytoskeleton
messages: plasmodesma

3702:AT3G13390
gene id: 3702:AT3G13390
uniprot id: A0A384KMQ0
uniprot id: Q9LJF2
names: Similarity
messages: Belongs to the multicopper oxidase family.

3702:AT1G76260
gene id: 3702:AT1G76260
uniprot id: Q6NPN9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of the CUL4-RBX1-DDB1-DWA1/DWA2 E3 ubiquitin-protein ligase complex that acts as negative regulator in abscisic acid (ABA) signaling. May function as the substrate recognition module within this complex leading to ABI5 degradation. Functionally redundant with DWA1.
messages: Increased sensitivity to abscisic acid (ABA) and salt.
messages: Interacts with ABI5 and DDB1A and DWA1.
messages: Nucleus