3218:PhpapaCp017
gene id: 3218:PhpapaCp017
uniprot id: A0A2R2WV01
uniprot id: Q6YXM2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaJ family.
messages: May help in the organization of the PsaE and PsaF subunits.
messages: Membrane
messages: chloroplast thylakoid membrane

3218:PhpapaCp083
gene id: 3218:PhpapaCp083
uniprot id: Q6YXP5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TIC214 family.
messages: Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope.
messages: Part of the Tic complex.
messages: chloroplast inner membrane

3218:PhpafMp34
gene id: 3218:PhpafMp34
uniprot id: Q1XGA0
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.

3218:PhpapaCp044
gene id: 3218:PhpapaCp044
uniprot id: A0A2R2WV33
uniprot id: Q6YXN8
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.
messages: The D1/D2 heterodimer binds P680, chlorophylls that are the primary electron donor of PSII, and subsequent electron acceptors. It shares a non-heme iron and each subunit binds pheophytin, quinone, additional chlorophylls, carotenoids and lipids. There is also a Cl(-1) ion associated with D1 and D2, which is required for oxygen evolution. The PSII complex binds additional chlorophylls, carotenoids and specific lipids.
messages: chloroplast thylakoid membrane

3218:PhpapaCp039
gene id: 3218:PhpapaCp039
uniprot id: Q8MFA3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsaA/PsaB family.
messages: P700 is a chlorophyll a/chlorophyll a' dimer, A0 is one or more chlorophyll a, A1 is one or both phylloquinones and FX is a shared 4Fe-4S iron-sulfur center.
messages: PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.
messages: The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits.
messages: chloroplast thylakoid membrane

3218:PhpapaCp029
gene id: 3218:PhpapaCp029
uniprot id: Q6YXR3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaI family.
messages: May help in the organization of the PsaL subunit.
messages: Membrane
messages: chloroplast thylakoid membrane

3218:PhpapaCp067
gene id: 3218:PhpapaCp067
uniprot id: A0A2R2WVD9
uniprot id: Q6YXK8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3218:PhpapaCp034
gene id: 3218:PhpapaCp034
uniprot id: A0A2R2WV23
uniprot id: Q6YXR0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Mitochondrion membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpapaCp035
gene id: 3218:PhpapaCp035
uniprot id: A0A2R2WVG9
uniprot id: Q6YXQ9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpapaCp040
gene id: 3218:PhpapaCp040
uniprot id: Q8MFA2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsaA/PsaB family.
messages: P700 is a chlorophyll a/chlorophyll a' dimer, A0 is one or more chlorophyll a, A1 is one or both phylloquinones and FX is a shared 4Fe-4S iron-sulfur center.
messages: PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.
messages: The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits.
messages: chloroplast thylakoid membrane

3218:PhpapaCp019
gene id: 3218:PhpapaCp019
uniprot id: A0A2R2WW63
uniprot id: Q6YXM0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetL family.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

3218:PhpapaCp068
gene id: 3218:PhpapaCp068
uniprot id: A0A2R2WV57
uniprot id: Q6YXK7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA.
messages: chloroplast

3218:PhpapaCp003
gene id: 3218:PhpapaCp003
uniprot id: A0A2R2WVE0
uniprot id: Q6YXR9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpapaCp065
gene id: 3218:PhpapaCp065
uniprot id: A0A2R2WVK4
uniprot id: Q6YXL0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3218:PhpafMp37
gene id: 3218:PhpafMp37
uniprot id: Q1XG97
names: Similarity
messages: Belongs to the universal ribosomal protein uL5 family.

3218:PhpapaCp076
gene id: 3218:PhpapaCp076
uniprot id: A0A2R2WVL0
uniprot id: Q6YXQ2
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn.
messages: Binds 2 [4Fe-4S] clusters. Cluster 2 is most probably the spectroscopically characterized electron acceptor FA and cluster 1 is most probably FB.
messages: The eukaryotic PSI reaction center is composed of at least 11 subunits.
messages: chloroplast thylakoid membrane

3218:PhpafMp36
gene id: 3218:PhpafMp36
uniprot id: Q1XG98
names: Similarity
messages: Belongs to the universal ribosomal protein uL16 family.

3218:PhpapaCp066
gene id: 3218:PhpapaCp066
uniprot id: A0A2R2WVL9
uniprot id: Q6YXK9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3218:PhpapaCp079
gene id: 3218:PhpapaCp079
uniprot id: A0A2R2WV64
uniprot id: Q6YXP9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpafMp01
gene id: 3218:PhpafMp01
uniprot id: Q1XGD3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the heme-copper respiratory oxidase family.
messages: Component of the cytochrome c oxidase (complex IV, CIV), a multisubunit enzyme composed of a catalytic core of 3 subunits and several supernumerary subunits. The complex exists as a monomer or a dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII).
messages: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
messages: Membrane
messages: Mitochondrion inner membrane

3218:PhpafMp31
gene id: 3218:PhpafMp31
uniprot id: Q1XGA3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 3 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor. Essential for the catalytic activity of complex I.
messages: Mitochondrion membrane

3218:PhpapaCp057
gene id: 3218:PhpapaCp057
uniprot id: A0A2R2WV46
uniprot id: Q6YXJ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS2 family.
messages: chloroplast

3218:PhpafMp11
gene id: 3218:PhpafMp11
uniprot id: Q1XGC3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS4 family.
messages: chloroplast

3218:PhpafMp26
gene id: 3218:PhpafMp26
uniprot id: Q1XGA8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c oxidase subunit 3 family.
messages: Component of the cytochrome c oxidase (complex IV, CIV), a multisubunit enzyme composed of a catalytic core of 3 subunits and several supernumerary subunits. The complex exists as a monomer or a dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII).
messages: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
messages: Membrane

3218:PhpapaCp075
gene id: 3218:PhpapaCp075
uniprot id: Q6YXQ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: chloroplast thylakoid membrane

3218:PhpapaCp041
gene id: 3218:PhpapaCp041
uniprot id: A0A2R2WV24
uniprot id: Q8MFA1
names: Function
names: Miscellaneous
names: RNA Editing
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family.
messages: Binds 16S rRNA, required for the assembly of 30S particles.
messages: Part of the 30S ribosomal subunit.
messages: RNA editing decreases as the tissue ages.
messages: The initiator methionine is created by RNA editing. Approximately 80% of transcripts are edited in young tissue (protonema), while editing declines to 20% of transcripts in mature leaves.
messages: chloroplast

3218:PhpafMp41
gene id: 3218:PhpafMp41
uniprot id: Q1XG93
names: Similarity
messages: Belongs to the universal ribosomal protein uS11 family.

3218:PhpafMp21
gene id: 3218:PhpafMp21
uniprot id: Q1XGB3
names: Similarity
messages: Belongs to the universal ribosomal protein uS12 family.

3218:PhpafMp27
gene id: 3218:PhpafMp27
uniprot id: Q1XGA7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Membrane

3218:PhpapaCp001
gene id: 3218:PhpapaCp001
uniprot id: Q6YXM6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Part of the 30S ribosomal subunit.
messages: With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
messages: chloroplast

3218:PhpapaCp047
gene id: 3218:PhpapaCp047
uniprot id: Q6YXN6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the intron maturase 2 family. MatK subfamily.
messages: Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.
messages: chloroplast

3218:PhpapaCp020
gene id: 3218:PhpapaCp020
uniprot id: A0A2R2WV07
uniprot id: Q6YXL9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbE/PsbF family.
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Membrane
messages: This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: With its partner (PsbF) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: chloroplast thylakoid membrane

3218:PhpapaCp055
gene id: 3218:PhpapaCp055
uniprot id: A0A2R2WVJ4
uniprot id: Q6YXK1
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase C chain family.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: In plastids the F-type ATPase is also known as CF(1)CF(0).
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: chloroplast thylakoid membrane

3218:PhpapaCp081
gene id: 3218:PhpapaCp081
uniprot id: A0A2R2WWA5
uniprot id: Q6YXP7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpapaCp036
gene id: 3218:PhpapaCp036
uniprot id: A0A2R2WVB1
uniprot id: Q6YXQ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 30 kDa subunit family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpapaCp059
gene id: 3218:PhpapaCp059
uniprot id: A0A2R2WVR8
uniprot id: P60288
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 Zn(2+) ion per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: chloroplast

3218:PhpafMp20
gene id: 3218:PhpafMp20
uniprot id: Q1XGB4
names: Subcellular Location Annotation
messages: Membrane

3218:PhpapaCp021
gene id: 3218:PhpapaCp021
uniprot id: A0A2R2WV41
uniprot id: Q6YXL8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbE/PsbF family.
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Membrane
messages: This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: With its partner (PsbE) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: chloroplast thylakoid membrane

3218:PhpapaCp046
gene id: 3218:PhpapaCp046
uniprot id: Q6YXN7
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: C-terminally processed by CtpA; processing is essential to allow assembly of the oxygen-evolving complex and thus photosynthetic growth.
messages: Herbicides such as atrazine, BNT, diuron or ioxynil bind in the Q(B) binding site and block subsequent electron transfer.
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
messages: Tyr-161 forms a radical intermediate that is referred to as redox-active TyrZ, YZ or Y-Z.
messages: chloroplast thylakoid membrane

3218:PhpapaCp007
gene id: 3218:PhpapaCp007
uniprot id: A0A2R2WVM4
uniprot id: Q6YXR5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family. PetD subfamily.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, petD), cytochrome f and the Rieske protein, while the 4 small subunits are petG, petL, petM and petN. The complex functions as a dimer (By similarity).
messages: chloroplast thylakoid membrane

3218:PhpafMp12
gene id: 3218:PhpafMp12
uniprot id: Q1XGC2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TatC family.
messages: Membrane

3218:PhpapaCp008
gene id: 3218:PhpapaCp008
uniprot id: A0A2R2WW52
uniprot id: Q6YXN2
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family. PetB subfamily.
messages: Binds 2 heme b groups non-covalently with two histidine residues as axial ligands.
messages: Binds one heme group covalently by a single cysteine link with no axial amino acid ligand. This heme was named heme ci.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Heme 1 (or BH or b566) is high-potential and absorbs at about 566 nm, and heme 2 (or BL or b562) is low-potential and absorbs at about 562 nm.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

3218:PhpapaCp069
gene id: 3218:PhpapaCp069
uniprot id: A0A2R2WV51
uniprot id: Q6YXK6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
messages: chloroplast

3218:PhpapaCp051
gene id: 3218:PhpapaCp051
uniprot id: Q6YXK4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaM family.
messages: chloroplast thylakoid membrane

3218:PhpafMp22
gene id: 3218:PhpafMp22
uniprot id: Q1XGB2
names: Similarity
messages: Belongs to the universal ribosomal protein uS7 family.

3218:PhpafMp17
gene id: 3218:PhpafMp17
uniprot id: Q1XGB7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 5 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor. Essential for the catalytic activity and assembly of complex I.
messages: Membrane
messages: Mitochondrion inner membrane

3218:PhpafMp32
gene id: 3218:PhpafMp32
uniprot id: Q9G6N7
names: Similarity
messages: Belongs to the complex I 49 kDa subunit family.

3218:PhpafMp30
gene id: 3218:PhpafMp30
uniprot id: Q1XGA4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Mitochondrion
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

3218:PhpapaCp037
gene id: 3218:PhpapaCp037
uniprot id: A0A2R2WV17
uniprot id: Q6YXP3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity (By similarity).
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.
messages: chloroplast

3218:PhpapaCp077
gene id: 3218:PhpapaCp077
uniprot id: A0A2R2WVE9
uniprot id: Q6YXQ1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpafMp33
gene id: 3218:PhpafMp33
uniprot id: Q1XGA1
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

3218:PhpapaCp015
gene id: 3218:PhpapaCp015
uniprot id: A0A2R2WV84
uniprot id: Q6YXM4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3218:PhpapaCp009
gene id: 3218:PhpapaCp009
uniprot id: A0A2R2WUZ6
uniprot id: Q6YXN1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbH family.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, numerous small proteins, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Phosphorylation is a light-dependent reaction catalyzed by a membrane-bound kinase; phosphorylation occurs on Thr residue(s) in the N-terminus of the protein.
messages: chloroplast thylakoid membrane

3218:PhpapaCp073
gene id: 3218:PhpapaCp073
uniprot id: A0A2R2WV98
uniprot id: Q6YXQ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to 23S rRNA.
messages: chloroplast

3218:PhpapaCp085
gene id: 3218:PhpapaCp085
uniprot id: A0A2R2WV76
uniprot id: Q6YXQ7
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NifH/BchL/ChlL family.
messages: Binds 1 [4Fe-4S] cluster per dimer.
messages: Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
messages: Homodimer. Protochlorophyllide reductase is composed of three subunits; ChlL, ChlN and ChlB.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: chloroplast

3218:PhpapaCp078
gene id: 3218:PhpapaCp078
uniprot id: A0A2R2WV67
uniprot id: Q6YXQ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 6 family.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpapaCp028
gene id: 3218:PhpapaCp028
uniprot id: A0A2R2WV11
uniprot id: Q6YXR4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf4 family.
messages: Membrane
messages: Seems to be required for the assembly of the photosystem I complex.
messages: chloroplast thylakoid membrane

3218:PhpapaCp052
gene id: 3218:PhpapaCp052
uniprot id: A0A2R2WV75
uniprot id: P61051
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A core subunit of photosystem II (PSII), probably helps stabilize the reaction center.
messages: A core subunit of photosystem II (PSII).
messages: Belongs to the Psb30/Ycf12 family.
messages: Belongs to the Ycf12 family.
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpapaCp053
gene id: 3218:PhpapaCp053
uniprot id: A0A2R2WV52
uniprot id: Q6YXK3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
messages: chloroplast thylakoid membrane

3218:PhpafMp23
gene id: 3218:PhpafMp23
uniprot id: Q1XGB1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase A chain family.
messages: Membrane
messages: Mitochondrion inner membrane

3218:PhpafMp04
gene id: 3218:PhpafMp04
uniprot id: Q1XGD0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase protein YMF19 family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Mitochondrion membrane
messages: This is one of the chains of the nonenzymatic component (CF(0) subunit) of the mitochondrial ATPase complex.

3218:PhpapaCp038
gene id: 3218:PhpapaCp038
uniprot id: Q6YXP2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf3 family.
messages: Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits.
messages: chloroplast thylakoid membrane

3218:PhpapaCp006
gene id: 3218:PhpapaCp006
uniprot id: Q6YXR6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetN family.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

3218:PhpafMp03
gene id: 3218:PhpafMp03
uniprot id: Q1XGD1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase protein MI25 family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Mitochondrion membrane
messages: This is one of the chains of the nonenzymatic component (CF(0) subunit) of the mitochondrial ATPase complex.

3218:PhpapaCp027
gene id: 3218:PhpapaCp027
uniprot id: A0A2R2WV05
uniprot id: Q6YXR1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CemA family.
messages: Belongs to the Cema family.
messages: May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake into chloroplasts.
messages: Membrane
messages: chloroplast inner membrane

3218:PhpafMp13
gene id: 3218:PhpafMp13
uniprot id: Q1XGC1
names: Subcellular Location Annotation
messages: Membrane

3218:PhpapaCp063
gene id: 3218:PhpapaCp063
uniprot id: A0A2R2WV61
uniprot id: Q6YXL2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
messages: chloroplast

3218:PhpafMp39
gene id: 3218:PhpafMp39
uniprot id: Q1XG95
names: Similarity
messages: Belongs to the universal ribosomal protein uL6 family.

3218:PhpafMp35
gene id: 3218:PhpafMp35
uniprot id: Q1XG99
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Mitochondrion

3218:PhpapaCp013
gene id: 3218:PhpapaCp013
uniprot id: A0A2R2WV08
uniprot id: Q6YXM7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Component of the chloroplastic Clp protease core complex.
messages: chloroplast stroma

3218:PhpapaCp056
gene id: 3218:PhpapaCp056
uniprot id: A0A2R2WVD1
uniprot id: Q6YXK0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase A chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.
messages: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
messages: Membrane
messages: chloroplast thylakoid membrane

3218:PhpafMp19
gene id: 3218:PhpafMp19
uniprot id: Q1XGB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor. Essential for the catalytic activity and assembly of complex I.
messages: Membrane
messages: Mitochondrion membrane

3218:PhpafMp16
gene id: 3218:PhpafMp16
uniprot id: Q1XGB8
names: Similarity
messages: Belongs to the universal ribosomal protein uL10 family.

3218:PhpapaCp080
gene id: 3218:PhpapaCp080
uniprot id: A0A2R2WVT5
uniprot id: Q6YXP8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3218:PhpafMp28
gene id: 3218:PhpafMp28
uniprot id: Q1XGA6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome b family.
messages: Binds 2 heme groups non-covalently.
messages: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
messages: Membrane
messages: Mitochondrion inner membrane

3218:PhpapaCp050
gene id: 3218:PhpapaCp050
uniprot id: A0A2R2WW85
uniprot id: Q6YXN3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbI family.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpapaCp018
gene id: 3218:PhpapaCp018
uniprot id: A0A2R2WVN3
uniprot id: Q6YXM1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetG family.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

3218:PhpapaCp062
gene id: 3218:PhpapaCp062
uniprot id: A0A2R2WV88
uniprot id: Q6YXJ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bL36 family.
messages: chloroplast

3218:PhpapaCp074
gene id: 3218:PhpapaCp074
uniprot id: A0A2R2WV73
uniprot id: Q6YXQ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bL32 family.
messages: chloroplast

3218:PhpapaCp084
gene id: 3218:PhpapaCp084
uniprot id: A0A2R2WV89
uniprot id: Q6YXP4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BchN/ChlN family.
messages: Belongs to the ChlB/BchB/BchZ family.
messages: Binds 1 [4Fe-4S] cluster per heterodimer. The cluster is bound at the heterodimer interface by residues from both subunits.
messages: Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
messages: Protochlorophyllide reductase is composed of three subunits; ChlL, ChlN and ChlB. Forms a heterotetramer of two ChlB and two ChlN subunits.
messages: chloroplast

3218:PhpapaCp011
gene id: 3218:PhpapaCp011
uniprot id: Q6YXM9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbT family.
messages: Seems to play a role in the dimerization of PSII.
messages: chloroplast thylakoid membrane

3218:PhpapaCp045
gene id: 3218:PhpapaCp045
uniprot id: P61243
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf2 family.
messages: Probable ATPase of unknown function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.
messages: chloroplast stroma

3218:PhpapaCp023
gene id: 3218:PhpapaCp023
uniprot id: A0A2R2WV15
uniprot id: Q6YXL6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbJ family.
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpafMp29
gene id: 3218:PhpafMp29
uniprot id: Q1XGA5
names: Function
names: Similarity
messages: Belongs to the complex I 30 kDa subunit family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

3218:PhpapaCp010
gene id: 3218:PhpapaCp010
uniprot id: Q6YXN0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbN family.
messages: May play a role in photosystem I and II biogenesis.
messages: Membrane
messages: Originally thought to be a component of PSII; based on experiments in Synechocystis, N.tabacum and barley, and its absence from PSII in T.elongatus and T.vulcanus, this is probably not true.
messages: chloroplast thylakoid membrane

3218:PhpapaCp058
gene id: 3218:PhpapaCp058
uniprot id: P60290
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.
messages: Binds 1 Zn(2+) ion per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: chloroplast

3218:PhpapaCp022
gene id: 3218:PhpapaCp022
uniprot id: A0A2R2WV26
uniprot id: Q6YXL7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbL family.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpapaCp054
gene id: 3218:PhpapaCp054
uniprot id: A0A2R2WV43
uniprot id: Q6YXK2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: In plastids the F-type ATPase is also known as CF(1)CF(0).
messages: Membrane
messages: chloroplast thylakoid membrane

3218:PhpafMp15
gene id: 3218:PhpafMp15
uniprot id: Q1XGB9
names: Cofactor
names: Subcellular Location Annotation
messages: Membrane
messages: The heme is bound between the two transmembrane subunits.

3218:PhpapaCp049
gene id: 3218:PhpapaCp049
uniprot id: A0A2R2WVQ9
uniprot id: Q6YXN4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbK family.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpapaCp002
gene id: 3218:PhpapaCp002
uniprot id: A0A2R2WUZ8
uniprot id: Q6YXS0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3218:PhpafMp08
gene id: 3218:PhpafMp08
uniprot id: Q1XGC6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmC/CycZ/HelC family.
messages: May be involved in the export of heme to the mitochondrion for the biogenesis of c-type cytochromes.
messages: Membrane
messages: Mitochondrion membrane

3218:PhpapaCp070
gene id: 3218:PhpapaCp070
uniprot id: A0A2R2WVS4
uniprot id: P60407
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3218:PhpapaCp042
gene id: 3218:PhpapaCp042
uniprot id: Q6YXP0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbZ family.
messages: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.
messages: chloroplast thylakoid membrane

3218:PhpapaCp032
gene id: 3218:PhpapaCp032
uniprot id: A0A2R2WV54
uniprot id: P80658
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
messages: chloroplast thylakoid membrane

3218:PhpapaCp072
gene id: 3218:PhpapaCp072
uniprot id: Q6YXQ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 5 family.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).
messages: chloroplast thylakoid membrane

3218:PhpapaCp030
gene id: 3218:PhpapaCp030
uniprot id: A0A2R2WW71
uniprot id: Q00761
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and 2 subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD).
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and two subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD).
messages: Belongs to the AccD/PCCB family.
messages: Binds 1 zinc ion per subunit.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
messages: chloroplast stroma

3218:PhpapaCp016
gene id: 3218:PhpapaCp016
uniprot id: A0A2R2WUY9
uniprot id: Q6YXM3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bL33 family.
messages: chloroplast

3218:PhpafMp38
gene id: 3218:PhpafMp38
uniprot id: Q1XG96
names: Similarity
messages: Belongs to the universal ribosomal protein uS14 family.

3218:PhpapaCp043
gene id: 3218:PhpapaCp043
uniprot id: A0A2R2WV44
uniprot id: Q6YXN9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbB/PsbC family. PsbC subfamily.
messages: Binds multiple chlorophylls and provides some of the ligands for the Ca-4Mn-5O cluster of the oxygen-evolving complex. It may also provide a ligand for a Cl- that is required for oxygen evolution. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpapaCp004
gene id: 3218:PhpapaCp004
uniprot id: A0A2R2WV60
uniprot id: Q6YXR8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbM family.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpapaCp026
gene id: 3218:PhpapaCp026
uniprot id: Q6YXL3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome f family.
messages: Binds 1 heme group covalently.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, petD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer (By similarity).
messages: chloroplast thylakoid membrane

3218:PhpafMp09
gene id: 3218:PhpafMp09
uniprot id: Q1XGC5
names: Similarity
messages: Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.

3218:PhpafMp42
gene id: 3218:PhpafMp42
uniprot id: Q1XG92
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase C chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Mitochondrion membrane

3218:PhpafMp07
gene id: 3218:PhpafMp07
uniprot id: Q1XGC7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmB/CycW/HelB family.
messages: Membrane

3218:PhpapaCp014
gene id: 3218:PhpapaCp014
uniprot id: A0A2R2WVF3
uniprot id: Q6YXM5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
messages: chloroplast

3218:PhpafMp06
gene id: 3218:PhpafMp06
uniprot id: Q1XGC8
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

3218:PhpapaCp031
gene id: 3218:PhpapaCp031
uniprot id: P34915
names: Cofactor
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuBisCO large chain family. Type I subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterohexadecamer of 8 large chains and 8 small chains; disulfide-linked. The disulfide link is formed within the large subunit homodimers.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: The disulfide bond which can form in the large chain dimeric partners within the hexadecamer appears to be associated with oxidative stress and protein turnover.
messages: chloroplast

3218:PhpafMp40
gene id: 3218:PhpafMp40
uniprot id: Q1XG94
names: Similarity
messages: Belongs to the universal ribosomal protein uS13 family.

3218:PhpapaCp048
gene id: 3218:PhpapaCp048
uniprot id: A0A2R2WV27
uniprot id: Q6YXN5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ChlB/BchB/BchZ family.
messages: Binds 1 [4Fe-4S] cluster per heterodimer. The cluster is bound at the heterodimer interface by residues from both subunits.
messages: Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
messages: Protochlorophyllide reductase is composed of three subunits; ChlL, ChlN and ChlB. Forms a heterotetramer of two ChlB and two ChlN subunits.
messages: chloroplast

3218:PhpapaCp064
gene id: 3218:PhpapaCp064
uniprot id: A0A2R2WV55
uniprot id: Q6YXL1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3218:PhpapaCp033
gene id: 3218:PhpapaCp033
uniprot id: Q6YXR2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase epsilon chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.
messages: chloroplast thylakoid membrane

3218:PhpapaCp060
gene id: 3218:PhpapaCp060
uniprot id: A0A2R2WW88
uniprot id: P60283
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: chloroplast

3218:PhpapaCp082
gene id: 3218:PhpapaCp082
uniprot id: A0A2R2WV59
uniprot id: Q6YXP6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3218:PhpapaCp012
gene id: 3218:PhpapaCp012
uniprot id: Q6YXM8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbB/PsbC family. PsbB subfamily.
messages: Binds multiple chlorophylls. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3218:PhpapaCp071
gene id: 3218:PhpapaCp071
uniprot id: A0A2R2WW98
uniprot id: Q6YXK5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: Binds to 23S rRNA.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3218:PhpapaCp061
gene id: 3218:PhpapaCp061
uniprot id: A0A2R2WV45
uniprot id: Q6YXJ8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3218:PhpafMp25
gene id: 3218:PhpafMp25
uniprot id: A0A2R2WV95
uniprot id: Q1XGA9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 2 family.
messages: Binds a copper A center.
messages: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
messages: Membrane
messages: Mitochondrion inner membrane

3218:PhpafMp24
gene id: 3218:PhpafMp24
uniprot id: Q1XGB0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 6 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor. Essential for the catalytic activity and assembly of complex I.
messages: Mitochondrion membrane