1401087:DAQ1742 RS13915
gene id: 1401087:DAQ1742_RS13915
uniprot id: A0A375ACS3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M48 family. BepA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
messages: Periplasm

1401087:DAQ1742 RS14790
gene id: 1401087:DAQ1742_RS14790
uniprot id: A0A375ADK7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RdgC family.
messages: May be involved in recombination.
messages: nucleoid

1401087:DAQ1742 RS03420
gene id: 1401087:DAQ1742_RS03420
uniprot id: A0A375A735
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. DsbC subfamily.
messages: Periplasm
messages: Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process.

1401087:DAQ1742 RS10830
gene id: 1401087:DAQ1742_RS10830
uniprot id: A0A375AB59
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SctL stator family.
messages: Cytoplasm

1401087:DAQ1742 RS03650
gene id: 1401087:DAQ1742_RS03650
uniprot id: A0A375A7H3
names: Similarity
messages: Belongs to the TPP enzyme family.

1401087:DAQ1742 RS17440
gene id: 1401087:DAQ1742_RS17440
uniprot id: A0A375AEW5
names: Similarity
names: Subunit
messages: Belongs to the beta-eliminating lyase family.
messages: Homotetramer.

1401087:DAQ1742 RS06510
gene id: 1401087:DAQ1742_RS06510
uniprot id: A0A375A8P7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FlhD family.
messages: Cytoplasm
messages: Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways.
messages: Homodimer; disulfide-linked. Forms a heterohexamer composed of two FlhC and four FlhD subunits. Each FlhC binds a FlhD dimer, forming a heterotrimer, and a hexamer assembles by dimerization of two heterotrimers.
messages: The C-terminal region contains a putative helix-turn-helix (HTH) motif, suggesting that this region may bind DNA.

1401087:DAQ1742 RS17380
gene id: 1401087:DAQ1742_RS17380
uniprot id: A0A375AG76
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AlaE exporter family.
messages: Cell inner membrane
messages: Exports L-alanine.

1401087:DAQ1742 RS18090
gene id: 1401087:DAQ1742_RS18090
uniprot id: A0A375AGN8
names: Similarity
messages: Belongs to the aspartokinase family.

1401087:DAQ1742 RS13440
gene id: 1401087:DAQ1742_RS13440
uniprot id: A0A375ACK9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Pal lipoprotein family.
messages: Cell outer membrane
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

1401087:DAQ1742 RS03895
gene id: 1401087:DAQ1742_RS03895
uniprot id: A0A375A7B7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS05715
gene id: 1401087:DAQ1742_RS05715
uniprot id: A0A375A856
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP L family.
messages: Cell inner membrane
messages: Inner membrane component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm.
messages: Membrane

1401087:DAQ1742 RS12685
gene id: 1401087:DAQ1742_RS12685
uniprot id: A0A375ACK5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. Vitamin B12 importer (TC 3.A.1.13.1) family.
messages: Cell membrane
messages: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (BtuD), two transmembrane proteins (BtuC) and a solute-binding protein (BtuF).

1401087:DAQ1742 RS00190
gene id: 1401087:DAQ1742_RS00190
uniprot id: A0A375A5A3
names: Caution
names: Function
names: Similarity
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
messages: Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS13360
gene id: 1401087:DAQ1742_RS13360
uniprot id: A0A375ACH3
names: Similarity
messages: Belongs to the aldose epimerase family.

1401087:DAQ1742 RS03190
gene id: 1401087:DAQ1742_RS03190
uniprot id: A0A375A6R8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NusA family.
messages: Cytoplasm
messages: Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.
messages: Participates in both transcription termination and antitermination.

1401087:DAQ1742 RS00960
gene id: 1401087:DAQ1742_RS00960
uniprot id: A0A375A5L3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase PH family.
messages: Homohexameric ring arranged as a trimer of dimers.
messages: Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.

1401087:DAQ1742 RS16625
gene id: 1401087:DAQ1742_RS16625
uniprot id: A0A375AEJ4
names: Similarity
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.

1401087:DAQ1742 RS04960
gene id: 1401087:DAQ1742_RS04960
uniprot id: A0A375A7L4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

1401087:DAQ1742 RS16550
gene id: 1401087:DAQ1742_RS16550
uniprot id: A0A375AEB9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS01960
gene id: 1401087:DAQ1742_RS01960
uniprot id: A0A375A663
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the cyclic nucleotide phosphodiesterase class-III family.
messages: Binds 2 Fe(2+) ions per subunit.
messages: Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.

1401087:DAQ1742 RS17625
gene id: 1401087:DAQ1742_RS17625
uniprot id: A0A375AF08
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DnaJ family.
messages: Binds 2 Zn(2+) ions per monomer.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
messages: The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity.

1401087:DAQ1742 RS00305
gene id: 1401087:DAQ1742_RS00305
uniprot id: A0A375A551
names: Function
names: Similarity
messages: Belongs to the mannonate dehydratase family.
messages: Catalyzes the dehydration of D-mannonate.

1401087:DAQ1742 RS01695
gene id: 1401087:DAQ1742_RS01695
uniprot id: A0A375A622
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AaeX family.
messages: Cell membrane

1401087:DAQ1742 RS09735
gene id: 1401087:DAQ1742_RS09735
uniprot id: A0A375AAH9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GHMP kinase family. IspE subfamily.
messages: Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
messages: Homodimer.

1401087:DAQ1742 RS11475
gene id: 1401087:DAQ1742_RS11475
uniprot id: A0A375ABL8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS14210
gene id: 1401087:DAQ1742_RS14210
uniprot id: A0A375ACX8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Membrane

1401087:DAQ1742 RS01240
gene id: 1401087:DAQ1742_RS01240
uniprot id: A0A375A5Y4
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.

1401087:DAQ1742 RS02225
gene id: 1401087:DAQ1742_RS02225
uniprot id: A0A375A661
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PyrI family.
messages: Binds 1 zinc ion per subunit.
messages: Contains catalytic and regulatory chains.
messages: Involved in allosteric regulation of aspartate carbamoyltransferase.

1401087:DAQ1742 RS09075
gene id: 1401087:DAQ1742_RS09075
uniprot id: A0A375ABG3
names: Similarity
messages: Belongs to the elongation factor P family.

1401087:DAQ1742 RS09205
gene id: 1401087:DAQ1742_RS09205
uniprot id: A0A375AA92
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NlpA lipoprotein family.
messages: Membrane

1401087:DAQ1742 RS18115
gene id: 1401087:DAQ1742_RS18115
uniprot id: A0A375AFA2
names: Domain
names: Function
names: Similarity
messages: Belongs to the vitamin-B12 dependent methionine synthase family.
messages: Catalyzes the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
messages: Modular enzyme with four functionally distinct domains. The isolated Hcy-binding domain catalyzes methyl transfer from free methylcobalamin to homocysteine. The Hcy-binding domain in association with the pterin-binding domain catalyzes the methylation of cob(I)alamin by methyltetrahydrofolate and the methylation of homocysteine. The B12-binding domain binds the cofactor. The AdoMet activation domain binds S-adenosyl-L-methionine. Under aerobic conditions cob(I)alamin can be converted to inactive cob(II)alamin. Reductive methylation by S-adenosyl-L-methionine and flavodoxin regenerates methylcobalamin.

1401087:DAQ1742 RS20380
gene id: 1401087:DAQ1742_RS20380
uniprot id: A0A375AH60
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MnmG family.
messages: Cytoplasm
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.

1401087:DAQ1742 RS01200
gene id: 1401087:DAQ1742_RS01200
uniprot id: A0A375A5T8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatC family.
messages: Cell membrane
messages: Membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
messages: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.

1401087:DAQ1742 RS07280
gene id: 1401087:DAQ1742_RS07280
uniprot id: A0A375A940
names: Similarity
messages: Belongs to the flavodoxin family.

1401087:DAQ1742 RS18375
gene id: 1401087:DAQ1742_RS18375
uniprot id: A0A375AG24
names: Function
names: Similarity
messages: Belongs to the bacterioferritin family.
messages: Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex.

1401087:DAQ1742 RS09000
gene id: 1401087:DAQ1742_RS09000
uniprot id: A0A375A9W0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS03515
gene id: 1401087:DAQ1742_RS03515
uniprot id: A0A375A6W1
names: Similarity
messages: Belongs to the bacterial sugar transferase family.

1401087:DAQ1742 RS12155
gene id: 1401087:DAQ1742_RS12155
uniprot id: A0A375ABW7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M14 family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in muropeptide degradation. Catalyzes the hydrolysis of the gamma-D-glutamyl-diaminopimelic acid (gamma-D-Glu-Dap) amide bond in the murein tripeptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelic acid, leading to the formation of L-Ala-gamma-D-Glu and Dap.

1401087:DAQ1742 RS10435
gene id: 1401087:DAQ1742_RS10435
uniprot id: A0A375AAQ2
names: Similarity
messages: Belongs to the pyruvate kinase family.

1401087:DAQ1742 RS03415
gene id: 1401087:DAQ1742_RS03415
uniprot id: A0A375A862
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 'phage' integrase family. XerD subfamily.
messages: Cytoplasm
messages: Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD, in which XerC interacts with XerD via its C-terminal region, XerD interacts with XerC via its C-terminal region and so on.
messages: FtsK may regulate the catalytic switch between XerC and XerD in the heterotetrameric complex during the two steps of the recombination process.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerC binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerD specifically exchanges the bottom DNA strands.

1401087:DAQ1742 RS01720
gene id: 1401087:DAQ1742_RS01720
uniprot id: A0A375A6C1
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

1401087:DAQ1742 RS11780
gene id: 1401087:DAQ1742_RS11780
uniprot id: A0A375AC29
names: Similarity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.

1401087:DAQ1742 RS06280
gene id: 1401087:DAQ1742_RS06280
uniprot id: A0A375A8I7
names: Similarity
messages: Belongs to the peptidase A31 family.

1401087:DAQ1742 RS15130
gene id: 1401087:DAQ1742_RS15130
uniprot id: A0A375ADG6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family.
messages: Cytoplasm
messages: Homotrimer.

1401087:DAQ1742 RS15275
gene id: 1401087:DAQ1742_RS15275
uniprot id: A0A375ADK6
names: Function
names: Similarity
messages: Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.
messages: Belongs to the Nudix hydrolase family. RppH subfamily.

1401087:DAQ1742 RS13935
gene id: 1401087:DAQ1742_RS13935
uniprot id: A0A375ACS7
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
messages: Allosterically activated by GTP.
messages: Belongs to the UPRTase family.
messages: Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.
messages: Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.

1401087:DAQ1742 RS20135
gene id: 1401087:DAQ1742_RS20135
uniprot id: A0A375AGG4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RnpA family.
messages: Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit.
messages: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.

1401087:DAQ1742 RS00145
gene id: 1401087:DAQ1742_RS00145
uniprot id: A0A375A5H7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS06865
gene id: 1401087:DAQ1742_RS06865
uniprot id: A0A375A8Z7
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

1401087:DAQ1742 RS13945
gene id: 1401087:DAQ1742_RS13945
uniprot id: A0A375ACW9
names: Function
names: Similarity
messages: Belongs to the GART family.
messages: Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.

1401087:DAQ1742 RS20350
gene id: 1401087:DAQ1742_RS20350
uniprot id: A0A375AH37
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Cell membrane
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Membrane

1401087:DAQ1742 RS20265
gene id: 1401087:DAQ1742_RS20265
uniprot id: A0A375AGK5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS02650
gene id: 1401087:DAQ1742_RS02650
uniprot id: A0A375A6P9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

1401087:DAQ1742 RS13775
gene id: 1401087:DAQ1742_RS13775
uniprot id: A0A375AD96
names: Similarity
messages: Belongs to the DNA polymerase HolA subunit family.

1401087:DAQ1742 RS05970
gene id: 1401087:DAQ1742_RS05970
uniprot id: A0A375A8K1
names: Similarity
messages: Belongs to the UPF0115 family.

1401087:DAQ1742 RS18775
gene id: 1401087:DAQ1742_RS18775
uniprot id: A0A375AFM8
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family. GreB subfamily.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.

1401087:DAQ1742 RS09760
gene id: 1401087:DAQ1742_RS09760
uniprot id: A0A375AAI8
names: Similarity
messages: Belongs to the UPF0162 family.

1401087:DAQ1742 RS19955
gene id: 1401087:DAQ1742_RS19955
uniprot id: A0A375AGC1
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS10630
gene id: 1401087:DAQ1742_RS10630
uniprot id: A0A375ACB9
names: Function
names: Similarity
messages: Belongs to the transposase mutator family.
messages: Required for the transposition of the insertion element.

1401087:DAQ1742 RS07635
gene id: 1401087:DAQ1742_RS07635
uniprot id: A0A375A9C2
names: Similarity
messages: Belongs to the myoviridae tail sheath protein family.

1401087:DAQ1742 RS17315
gene id: 1401087:DAQ1742_RS17315
uniprot id: A0A375AF30
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsQ/DivIB family. FtsQ subfamily.
messages: Cell inner membrane
messages: Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
messages: Part of a complex composed of FtsB, FtsL and FtsQ.

1401087:DAQ1742 RS00040
gene id: 1401087:DAQ1742_RS00040
uniprot id: A0A375A568
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS01605
gene id: 1401087:DAQ1742_RS01605
uniprot id: A0A375A5V6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. PrmA family.
messages: Cytoplasm
messages: Methylates ribosomal protein L11.

1401087:DAQ1742 RS18845
gene id: 1401087:DAQ1742_RS18845
uniprot id: A0A375AFR0
names: Function
names: Similarity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Synthesizes alpha-1,4-glucan chains using ADP-glucose.

1401087:DAQ1742 RS01190
gene id: 1401087:DAQ1742_RS01190
uniprot id: A0A375A5X7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatA/E family.
messages: Cell membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
messages: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.

1401087:DAQ1742 RS03140
gene id: 1401087:DAQ1742_RS03140
uniprot id: A0A375A6Z2
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.

1401087:DAQ1742 RS07155
gene id: 1401087:DAQ1742_RS07155
uniprot id: A0A375A935
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS18695
gene id: 1401087:DAQ1742_RS18695
uniprot id: A0A375AG96
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
messages: Binds 1 divalent metal cation per subunit. Can use either Co(2+) or Zn(2+).
messages: Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
messages: Cytoplasm

1401087:DAQ1742 RS10110
gene id: 1401087:DAQ1742_RS10110
uniprot id: A0A375AAY1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cob(I)alamin adenosyltransferase family.
messages: Cytoplasm
messages: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.

1401087:DAQ1742 RS15305
gene id: 1401087:DAQ1742_RS15305
uniprot id: A0A375ADJ6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
messages: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
messages: Monomer.

1401087:DAQ1742 RS00615
gene id: 1401087:DAQ1742_RS00615
uniprot id: A0A375A5G0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the auxin efflux carrier (TC 2.A.69) family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS06200
gene id: 1401087:DAQ1742_RS06200
uniprot id: A0A375A8L4
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

1401087:DAQ1742 RS10145
gene id: 1401087:DAQ1742_RS10145
uniprot id: A0A375AAJ0
names: Function
names: Similarity
messages: Belongs to the TrpC family.
messages: Belongs to the TrpF family.
messages: Bifunctional enzyme that catalyzes two sequential steps of tryptophan biosynthetic pathway. The first reaction is catalyzed by the isomerase, coded by the TrpF domain; the second reaction is catalyzed by the synthase, coded by the TrpC domain.
messages: In the C-terminal section; belongs to the TrpF family.
messages: In the N-terminal section; belongs to the TrpC family.

1401087:DAQ1742 RS05100
gene id: 1401087:DAQ1742_RS05100
uniprot id: A0A375A8A7
names: Function
names: Subunit
messages: Catalyzes the synthesis of GMP from XMP.
messages: Homodimer.

1401087:DAQ1742 RS01765
gene id: 1401087:DAQ1742_RS01765
uniprot id: A0A375A618
names: Function
names: Similarity
messages: Belongs to the sigma-54 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

1401087:DAQ1742 RS06430
gene id: 1401087:DAQ1742_RS06430
uniprot id: A0A375A8K2
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

1401087:DAQ1742 RS14185
gene id: 1401087:DAQ1742_RS14185
uniprot id: A0A375AEE2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS16380
gene id: 1401087:DAQ1742_RS16380
uniprot id: A0A375AE82
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with bS18 to 16S ribosomal RNA.

1401087:DAQ1742 RS19730
gene id: 1401087:DAQ1742_RS19730
uniprot id: A0A375AGQ7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily.
messages: Cell membrane
messages: Efflux system for nickel and cobalt.
messages: Membrane

1401087:DAQ1742 RS05095
gene id: 1401087:DAQ1742_RS05095
uniprot id: A0A375A7Y3
names: Activity Regulation
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IMPDH/GMPR family.
messages: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
messages: Homotetramer.
messages: Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH.

1401087:DAQ1742 RS09470
gene id: 1401087:DAQ1742_RS09470
uniprot id: A0A375AA78
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS1 family.
messages: Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.

1401087:DAQ1742 RS12750
gene id: 1401087:DAQ1742_RS12750
uniprot id: A0A375ADJ4
names: Similarity
messages: Belongs to the glycosyl hydrolase 31 family.

1401087:DAQ1742 RS07470
gene id: 1401087:DAQ1742_RS07470
uniprot id: A0A375A9B3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. RhlE subfamily.
messages: Cytoplasm
messages: DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA.

1401087:DAQ1742 RS05305
gene id: 1401087:DAQ1742_RS05305
uniprot id: A0A375A7Y5
names: Similarity
messages: Belongs to the iron-sulfur dependent L-serine dehydratase family.

1401087:DAQ1742 RS19455
gene id: 1401087:DAQ1742_RS19455
uniprot id: A0A375AG27
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

1401087:DAQ1742 RS17535
gene id: 1401087:DAQ1742_RS17535
uniprot id: A0A375AFJ3
names: Function
names: Similarity
messages: Belongs to the Ap4A hydrolase family.
messages: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP.

1401087:DAQ1742 RS11390
gene id: 1401087:DAQ1742_RS11390
uniprot id: A0A375ABT8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS15120
gene id: 1401087:DAQ1742_RS15120
uniprot id: A0A375ADH6
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Monomer.
messages: Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.

1401087:DAQ1742 RS19265
gene id: 1401087:DAQ1742_RS19265
uniprot id: A0A375AFY8
names: Similarity
messages: Belongs to the glycosyl hydrolase 28 family.

1401087:DAQ1742 RS09355
gene id: 1401087:DAQ1742_RS09355
uniprot id: A0A375AAB4
names: Similarity
messages: Belongs to the ClpA/ClpB family.

1401087:DAQ1742 RS13095
gene id: 1401087:DAQ1742_RS13095
uniprot id: A0A375ACB6
names: Similarity
messages: Belongs to the DegT/DnrJ/EryC1 family.

1401087:DAQ1742 RS12210
gene id: 1401087:DAQ1742_RS12210
uniprot id: A0A375ABT1
names: Similarity
messages: Belongs to the PspA/IM30 family.

1401087:DAQ1742 RS04820
gene id: 1401087:DAQ1742_RS04820
uniprot id: A0A375A7X9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PNP synthase family.
messages: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
messages: Cytoplasm
messages: Homooctamer; tetramer of dimers.

1401087:DAQ1742 RS02060
gene id: 1401087:DAQ1742_RS02060
uniprot id: A0A375A685
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.

1401087:DAQ1742 RS08085
gene id: 1401087:DAQ1742_RS08085
uniprot id: A0A375A9J6
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS09855
gene id: 1401087:DAQ1742_RS09855
uniprot id: A0A375AAD4
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS20275
gene id: 1401087:DAQ1742_RS20275
uniprot id: A0A375AGJ1
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

1401087:DAQ1742 RS00515
gene id: 1401087:DAQ1742_RS00515
uniprot id: A0A375A5E1
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS12715
gene id: 1401087:DAQ1742_RS12715
uniprot id: A0A375AC38
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

1401087:DAQ1742 RS15885
gene id: 1401087:DAQ1742_RS15885
uniprot id: A0A375AEF1
names: Similarity
messages: Belongs to the ABC transporter superfamily.

1401087:DAQ1742 RS18805
gene id: 1401087:DAQ1742_RS18805
uniprot id: A0A375AFT4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NfuA family.
messages: Binds 1 [4Fe-4S] cluster per subunit. The cluster is presumably bound at the interface of two monomers.
messages: Homodimer.
messages: Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.

1401087:DAQ1742 RS03930
gene id: 1401087:DAQ1742_RS03930
uniprot id: A0A375A726
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine-cytosine permease (2.A.39) family.
messages: Membrane

1401087:DAQ1742 RS17555
gene id: 1401087:DAQ1742_RS17555
uniprot id: A0A375AF34
names: Similarity
messages: Belongs to the ThrE exporter (TC 2.A.79) family.

1401087:DAQ1742 RS09840
gene id: 1401087:DAQ1742_RS09840
uniprot id: A0A375AAV0
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS01505
gene id: 1401087:DAQ1742_RS01505
uniprot id: A0A375A623
names: Similarity
messages: Belongs to the SIS family. AgaS subfamily.

1401087:DAQ1742 RS02725
gene id: 1401087:DAQ1742_RS02725
uniprot id: A0A375A6N0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

1401087:DAQ1742 RS08990
gene id: 1401087:DAQ1742_RS08990
uniprot id: A0A375A9V3
names: Similarity
messages: Belongs to the UPF0352 family.

1401087:DAQ1742 RS18440
gene id: 1401087:DAQ1742_RS18440
uniprot id: A0A375AFF6
names: Similarity
messages: Belongs to the FKBP-type PPIase family.

1401087:DAQ1742 RS01860
gene id: 1401087:DAQ1742_RS01860
uniprot id: A0A375A619
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

1401087:DAQ1742 RS18505
gene id: 1401087:DAQ1742_RS18505
uniprot id: A0A375AGW5
names: Similarity
messages: Belongs to the phosphoribulokinase family.

1401087:DAQ1742 RS18290
gene id: 1401087:DAQ1742_RS18290
uniprot id: A0A375AFJ0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL6 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

1401087:DAQ1742 RS13615
gene id: 1401087:DAQ1742_RS13615
uniprot id: A0A375ACL6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SeqA family.
messages: Cytoplasm
messages: Homodimer. Polymerizes to form helical filaments.
messages: Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re-initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.

1401087:DAQ1742 RS03970
gene id: 1401087:DAQ1742_RS03970
uniprot id: A0A375A7D4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PEP-utilizing enzyme family.
messages: Cytoplasm
messages: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).

1401087:DAQ1742 RS17410
gene id: 1401087:DAQ1742_RS17410
uniprot id: A0A375AF06
names: Function
names: Similarity
names: Subunit
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
messages: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-ketoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).
messages: Homodimer.

1401087:DAQ1742 RS20110
gene id: 1401087:DAQ1742_RS20110
uniprot id: A0A375AGE4
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
messages: Belongs to the type II topoisomerase GyrB family.
messages: Binds two Mg(2+) per subunit. The magnesium ions form salt bridges with both the protein and the DNA. Can also accept other divalent metal cations, such as Mn(2+) or Ca(2+).
messages: Cytoplasm
messages: Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.
messages: Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.

1401087:DAQ1742 RS12905
gene id: 1401087:DAQ1742_RS12905
uniprot id: A0A375AC83
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
messages: Homodimer.

1401087:DAQ1742 RS06155
gene id: 1401087:DAQ1742_RS06155
uniprot id: A0A375A898
names: Similarity
messages: Belongs to the UPF0304 family.

1401087:DAQ1742 RS11365
gene id: 1401087:DAQ1742_RS11365
uniprot id: A0A375ABQ4
names: Function
names: Similarity
messages: Belongs to the DadA oxidoreductase family.
messages: Oxidative deamination of D-amino acids.

1401087:DAQ1742 RS08235
gene id: 1401087:DAQ1742_RS08235
uniprot id: A0A375AAY8
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS03845
gene id: 1401087:DAQ1742_RS03845
uniprot id: A0A375A760
names: Function
names: Similarity
messages: Belongs to the RecN family.
messages: May be involved in recombinational repair of damaged DNA.

1401087:DAQ1742 RS00200
gene id: 1401087:DAQ1742_RS00200
uniprot id: A0A375A573
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

1401087:DAQ1742 RS18685
gene id: 1401087:DAQ1742_RS18685
uniprot id: A0A375AH00
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

1401087:DAQ1742 RS04550
gene id: 1401087:DAQ1742_RS04550
uniprot id: A0A375A7J4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS16175
gene id: 1401087:DAQ1742_RS16175
uniprot id: A0A375AEL8
names: Similarity
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily.
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GlucD subfamily.

1401087:DAQ1742 RS02205
gene id: 1401087:DAQ1742_RS02205
uniprot id: A0A375A664
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS03385
gene id: 1401087:DAQ1742_RS03385
uniprot id: A0A375A715
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0073 (Hly-III) family.
messages: Membrane

1401087:DAQ1742 RS18190
gene id: 1401087:DAQ1742_RS18190
uniprot id: A0A375AFV0
names: Similarity
messages: Belongs to the Smg family.

1401087:DAQ1742 RS18640
gene id: 1401087:DAQ1742_RS18640
uniprot id: A0A375AGZ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polysaccharide lyase 1 family.
messages: Secreted

1401087:DAQ1742 RS16120
gene id: 1401087:DAQ1742_RS16120
uniprot id: A0A375AEL0
names: Similarity
messages: Belongs to the sodium:galactoside symporter (TC 2.A.2) family.

1401087:DAQ1742 RS01260
gene id: 1401087:DAQ1742_RS01260
uniprot id: A0A375A5T6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HemG family.
messages: Binds 1 FMN non-covalently per subunit.
messages: Catalyzes the 6-electron oxidation of protoporphyrinogen IX to form protoporphyrin IX; under anaerobic conditions uses menaquinone as an electron acceptor, under aerobic conditions uses ubiquinone as an electron acceptor.
messages: Cell membrane

1401087:DAQ1742 RS04585
gene id: 1401087:DAQ1742_RS04585
uniprot id: A0A375A7T6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-2 integral membrane protein family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS14680
gene id: 1401087:DAQ1742_RS14680
uniprot id: A0A375AD72
names: Caution
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the thiamine-monophosphate kinase family.
messages: Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate.

1401087:DAQ1742 RS00140
gene id: 1401087:DAQ1742_RS00140
uniprot id: A0A375A562
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glutamine synthetase family.
messages: Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.
messages: Cytoplasm
messages: Oligomer of 12 subunits arranged in the form of two hexagons.

1401087:DAQ1742 RS11270
gene id: 1401087:DAQ1742_RS11270
uniprot id: A0A375AB77
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS16475
gene id: 1401087:DAQ1742_RS16475
uniprot id: A0A375AEA7
names: Similarity
messages: Belongs to the EcnA/EcnB lipoprotein family.

1401087:DAQ1742 RS12865
gene id: 1401087:DAQ1742_RS12865
uniprot id: A0A375AC59
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. FabH family.
messages: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.
messages: Cytoplasm
messages: Homodimer.
messages: The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH.

1401087:DAQ1742 RS01795
gene id: 1401087:DAQ1742_RS01795
uniprot id: A0A375A676
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS06795
gene id: 1401087:DAQ1742_RS06795
uniprot id: A0A375A8R3
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS17325
gene id: 1401087:DAQ1742_RS17325
uniprot id: A0A375AET5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family.
messages: Cell wall formation.
messages: Cytoplasm

1401087:DAQ1742 RS14625
gene id: 1401087:DAQ1742_RS14625
uniprot id: A0A375AD75
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c oxidase subunit 3 family.
messages: Cell membrane
messages: Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.
messages: Heterooctamer of two A chains, two B chains, two C chains and two D chains.
messages: Membrane

1401087:DAQ1742 RS13660
gene id: 1401087:DAQ1742_RS13660
uniprot id: A0A375ACM2
names: Cofactor
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. NagA family.
messages: Binds 1 divalent metal cation per subunit.

1401087:DAQ1742 RS09065
gene id: 1401087:DAQ1742_RS09065
uniprot id: A0A375AAB6
names: Similarity
messages: Belongs to the peptidase C40 family.

1401087:DAQ1742 RS18705
gene id: 1401087:DAQ1742_RS18705
uniprot id: A0A375AFN5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial secretin family.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS19330
gene id: 1401087:DAQ1742_RS19330
uniprot id: A0A375AGM0
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IlvD/Edd family.
messages: Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.
messages: Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS17345
gene id: 1401087:DAQ1742_RS17345
uniprot id: A0A375AET9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 4 family. MraY subfamily.
messages: Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS10315
gene id: 1401087:DAQ1742_RS10315
uniprot id: A0A375AB25
names: Cofactor
names: Similarity
messages: Belongs to the nitroreductase family.
messages: Binds 1 FMN per subunit.

1401087:DAQ1742 RS14075
gene id: 1401087:DAQ1742_RS14075
uniprot id: A0A375ADH1
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the RcsB family.
messages: Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.
messages: Interacts with RcsD.
messages: Phosphorylated and activated by RcsD.

1401087:DAQ1742 RS06630
gene id: 1401087:DAQ1742_RS06630
uniprot id: A0A375A8S6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body
messages: Belongs to the FlgI family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.

1401087:DAQ1742 RS13890
gene id: 1401087:DAQ1742_RS13890
uniprot id: A0A375AE79
names: Similarity
messages: Belongs to the SAICAR synthetase family.

1401087:DAQ1742 RS06720
gene id: 1401087:DAQ1742_RS06720
uniprot id: A0A375A922
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS10340
gene id: 1401087:DAQ1742_RS10340
uniprot id: A0A375AAN4
names: Cofactor
names: Similarity
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit. The zinc ion is important for the structural integrity of the protein.

1401087:DAQ1742 RS16270
gene id: 1401087:DAQ1742_RS16270
uniprot id: A0A375AEF5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Cell inner membrane

1401087:DAQ1742 RS03200
gene id: 1401087:DAQ1742_RS03200
uniprot id: A0A375A6Z5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RbfA family.
messages: Cytoplasm
messages: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.

1401087:DAQ1742 RS10285
gene id: 1401087:DAQ1742_RS10285
uniprot id: A0A375AAM5
names: Function
names: Similarity
messages: Belongs to the PurU family.
messages: Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).

1401087:DAQ1742 RS11375
gene id: 1401087:DAQ1742_RS11375
uniprot id: A0A375ABE1
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Homodimer.
messages: Multifunctional regulator of fatty acid metabolism.

1401087:DAQ1742 RS06290
gene id: 1401087:DAQ1742_RS06290
uniprot id: A0A375A8J8
names: Function
names: Similarity
messages: Belongs to the HypA/HybF family.
messages: Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.

1401087:DAQ1742 RS13830
gene id: 1401087:DAQ1742_RS13830
uniprot id: A0A375AD25
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TatA/E family. TatE subfamily.
messages: Cell inner membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA.

1401087:DAQ1742 RS06980
gene id: 1401087:DAQ1742_RS06980
uniprot id: A0A375AA69
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CitD family.
messages: Covalent carrier of the coenzyme of citrate lyase.
messages: Cytoplasm
messages: Oligomer with a subunit composition of (alpha,beta,gamma)6.

1401087:DAQ1742 RS16415
gene id: 1401087:DAQ1742_RS16415
uniprot id: A0A375AFM6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
messages: Belongs to the RNR ribonuclease family. RNase R subfamily.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS05260
gene id: 1401087:DAQ1742_RS05260
uniprot id: A0A375A8D8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal stress protein A family.
messages: Cytoplasm

1401087:DAQ1742 RS10445
gene id: 1401087:DAQ1742_RS10445
uniprot id: A0A375AAQ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LpxL/LpxM/LpxP family. LpxM subfamily.
messages: Catalyzes the transfer of an acyl chain from an acyl-[acyl-carrier-protein] (ACP) to a Kdo(2)-(acyl)-lipid IV(A) to form a Kdo(2)-lipid A.
messages: Cell inner membrane

1401087:DAQ1742 RS10920
gene id: 1401087:DAQ1742_RS10920
uniprot id: A0A375AB45
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliR/MopE/SpaR family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS04705
gene id: 1401087:DAQ1742_RS04705
uniprot id: A0A375A7M6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DoxX family.
messages: Membrane

1401087:DAQ1742 RS09480
gene id: 1401087:DAQ1742_RS09480
uniprot id: A0A375AAC3
names: Similarity
names: Subcellular Location Annotation
messages: Cytoplasm
messages: In the C-terminal section; belongs to the PRA-PH family.
messages: In the N-terminal section; belongs to the PRA-CH family.

1401087:DAQ1742 RS02545
gene id: 1401087:DAQ1742_RS02545
uniprot id: A0A375A6N6
names: Similarity
messages: Belongs to the UPF0149 family.

1401087:DAQ1742 RS06800
gene id: 1401087:DAQ1742_RS06800
uniprot id: A0A375A8V9
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS06810
gene id: 1401087:DAQ1742_RS06810
uniprot id: A0A375A8Y4
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS13650
gene id: 1401087:DAQ1742_RS13650
uniprot id: A0A375AD74
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS18255
gene id: 1401087:DAQ1742_RS18255
uniprot id: A0A375AGR9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

1401087:DAQ1742 RS07065
gene id: 1401087:DAQ1742_RS07065
uniprot id: A0A375A933
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB family.
messages: Cell inner membrane

1401087:DAQ1742 RS17970
gene id: 1401087:DAQ1742_RS17970
uniprot id: A0A375AF90
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Cell inner membrane

1401087:DAQ1742 RS06300
gene id: 1401087:DAQ1742_RS06300
uniprot id: A0A375A8D1
names: Similarity
messages: Belongs to the HupF/HypC family.

1401087:DAQ1742 RS02490
gene id: 1401087:DAQ1742_RS02490
uniprot id: A0A375A6T6
names: Caution
names: Function
names: Similarity
messages: Belongs to the rhamnulokinase family.
messages: Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS18275
gene id: 1401087:DAQ1742_RS18275
uniprot id: A0A375AFD4
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL30 family.
messages: Part of the 50S ribosomal subunit.

1401087:DAQ1742 RS13810
gene id: 1401087:DAQ1742_RS13810
uniprot id: A0A375ACS1
names: Function
names: Similarity
messages: Belongs to the peptidase S11 family.
messages: Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.

1401087:DAQ1742 RS14090
gene id: 1401087:DAQ1742_RS14090
uniprot id: A0A375AEC4
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
messages: O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.

1401087:DAQ1742 RS11465
gene id: 1401087:DAQ1742_RS11465
uniprot id: A0A375ABF5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS04575
gene id: 1401087:DAQ1742_RS04575
uniprot id: A0A375A8S5
names: Function
names: Similarity
messages: Belongs to the beta-class carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.

1401087:DAQ1742 RS00295
gene id: 1401087:DAQ1742_RS00295
uniprot id: A0A375A5K5
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS20180
gene id: 1401087:DAQ1742_RS20180
uniprot id: A0A375AGK4
names: Cofactor
names: Similarity
messages: Belongs to the 4HPPD family.
messages: Binds 1 Fe cation per subunit.

1401087:DAQ1742 RS04085
gene id: 1401087:DAQ1742_RS04085
uniprot id: A0A375A7B3
names: Similarity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.

1401087:DAQ1742 RS17775
gene id: 1401087:DAQ1742_RS17775
uniprot id: A0A375AF29
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. Epd subfamily.
messages: Catalyzes the NAD-dependent conversion of D-erythrose 4-phosphate to 4-phosphoerythronate.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS18865
gene id: 1401087:DAQ1742_RS18865
uniprot id: A0A375AG00
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS05680
gene id: 1401087:DAQ1742_RS05680
uniprot id: A0A375A8C2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATPase component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm. Acts as a molecular motor to provide the energy that is required for assembly of the pseudopilus and the extrusion of substrates generated in the cytoplasm.
messages: Belongs to the GSP E family.
messages: Cell inner membrane

1401087:DAQ1742 RS17280
gene id: 1401087:DAQ1742_RS17280
uniprot id: A0A375AET2
names: Similarity
messages: Belongs to the Nudix hydrolase family.

1401087:DAQ1742 RS06095
gene id: 1401087:DAQ1742_RS06095
uniprot id: A0A375A8F4
names: Caution
names: Function
names: Similarity
messages: Belongs to the UbiX/PAD1 family.
messages: Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS01770
gene id: 1401087:DAQ1742_RS01770
uniprot id: A0A375A6D4
names: Function
names: Similarity
messages: Belongs to the ABC transporter superfamily. Outer membrane lipopolysaccharide export (TC 1.B.42) family.
messages: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system.

1401087:DAQ1742 RS01220
gene id: 1401087:DAQ1742_RS01220
uniprot id: A0A375A5W2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UbiD family.
messages: Binds 1 prenylated FMN (prenyl-FMN) per subunit.
messages: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.
messages: Cell membrane
messages: Homohexamer.

1401087:DAQ1742 RS12875
gene id: 1401087:DAQ1742_RS12875
uniprot id: A0A375ACP7
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

1401087:DAQ1742 RS06590
gene id: 1401087:DAQ1742_RS06590
uniprot id: A0A375A8S0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FlgA family.
messages: Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly.
messages: Periplasm

1401087:DAQ1742 RS16440
gene id: 1401087:DAQ1742_RS16440
uniprot id: A0A375AET0
names: Similarity
messages: Belongs to the GSP E family.

1401087:DAQ1742 RS02500
gene id: 1401087:DAQ1742_RS02500
uniprot id: A0A375A6B7
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Activates expression of the rhaSR operon in response to L-rhamnose.
messages: Binds DNA as a dimer.
messages: Cytoplasm

1401087:DAQ1742 RS19290
gene id: 1401087:DAQ1742_RS19290
uniprot id: A0A375AG28
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS02865
gene id: 1401087:DAQ1742_RS02865
uniprot id: A0A375A6H7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CpxP/Spy family.
messages: Periplasm

1401087:DAQ1742 RS05185
gene id: 1401087:DAQ1742_RS05185
uniprot id: A0A375A7R4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the outer membrane OOP (TC 1.B.6) superfamily. OmpA family.
messages: Cell outer membrane
messages: Membrane
messages: Monomer and homodimer.
messages: The extracellular loops are most variable in sequence, and in some bacteria confer sensitivity to phage and/or colicins.
messages: With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage.

1401087:DAQ1742 RS04525
gene id: 1401087:DAQ1742_RS04525
uniprot id: A0A375A7N4
names: Function
names: Subunit
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.
messages: The DNA polymerase holoenzyme is a complex that contains 10 different types of subunits. These subunits are organized into 3 functionally essential subassemblies: the pol III core, the beta sliding clamp processivity factor and the clamp-loading complex. The pol III core (subunits alpha,epsilon and theta) contains the polymerase and the 3'-5' exonuclease proofreading activities. The polymerase is tethered to the template via the sliding clamp processivity factor. The clamp-loading complex assembles the beta processivity factor onto the primer template and plays a central role in the organization and communication at the replication fork. This complex contains delta, delta', psi and chi, and copies of either or both of two different DnaX proteins, gamma and tau.

1401087:DAQ1742 RS04595
gene id: 1401087:DAQ1742_RS04595
uniprot id: A0A375A7M7
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the pantothenate synthetase family.
messages: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.
messages: Cytoplasm
messages: Homodimer.
messages: The reaction proceeds by a bi uni uni bi ping pong mechanism.

1401087:DAQ1742 RS20230
gene id: 1401087:DAQ1742_RS20230
uniprot id: A0A375AGL7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.
messages: Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
messages: Homodimer.

1401087:DAQ1742 RS06230
gene id: 1401087:DAQ1742_RS06230
uniprot id: A0A375A8I5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1401087:DAQ1742 RS04655
gene id: 1401087:DAQ1742_RS04655
uniprot id: A0A375A7L5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HesB/IscA family.
messages: Binds 1 iron-sulfur cluster per subunit.
messages: Homodimer.
messages: Required for insertion of 4Fe-4S clusters for at least IspG.

1401087:DAQ1742 RS10190
gene id: 1401087:DAQ1742_RS10190
uniprot id: A0A375AAR0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TonB family.
messages: Cell inner membrane
messages: Homodimer. Forms a complex with the accessory proteins ExbB and ExbD.
messages: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins.

1401087:DAQ1742 RS18250
gene id: 1401087:DAQ1742_RS18250
uniprot id: A0A375AFC8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

1401087:DAQ1742 RS18765
gene id: 1401087:DAQ1742_RS18765
uniprot id: A0A375AG66
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS12165
gene id: 1401087:DAQ1742_RS12165
uniprot id: A0A375ABS3
names: Cofactor
names: Similarity
messages: Belongs to the peptidase S45 family.
messages: Binds 1 Ca(2+) ion per dimer.

1401087:DAQ1742 RS15870
gene id: 1401087:DAQ1742_RS15870
uniprot id: A0A375ADW7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine-cytosine permease (2.A.39) family.
messages: Membrane

1401087:DAQ1742 RS15950
gene id: 1401087:DAQ1742_RS15950
uniprot id: A0A375ADY7
names: Similarity
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-II family.

1401087:DAQ1742 RS04665
gene id: 1401087:DAQ1742_RS04665
uniprot id: A0A375A817
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
messages: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulation.
messages: Homodimer.

1401087:DAQ1742 RS03080
gene id: 1401087:DAQ1742_RS03080
uniprot id: A0A375A6P6
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KAE1 / TsaD family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction.

1401087:DAQ1742 RS18295
gene id: 1401087:DAQ1742_RS18295
uniprot id: A0A375AFW7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

1401087:DAQ1742 RS13405
gene id: 1401087:DAQ1742_RS13405
uniprot id: A0A375ACI4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nicotinamide ribonucleoside (NR) uptake permease (TC 4.B.1) family.
messages: Membrane
messages: Required for nicotinamide riboside transport across the inner membrane.

1401087:DAQ1742 RS12795
gene id: 1401087:DAQ1742_RS12795
uniprot id: A0A375AC96
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LpoB family.
messages: Cell outer membrane
messages: Interacts with PBP1b.
messages: Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b).

1401087:DAQ1742 RS04920
gene id: 1401087:DAQ1742_RS04920
uniprot id: A0A375A7Z2
names: Caution
names: Cofactor
names: Domain
names: Function
names: Similarity
messages: Belongs to the globin family. Two-domain flavohemoproteins subfamily.
messages: Binds 1 FAD per subunit.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Consists of two distinct domains; an N-terminal heme-containing oxygen-binding domain and a C-terminal reductase domain with binding sites for FAD and NAD(P)H.
messages: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS05385
gene id: 1401087:DAQ1742_RS05385
uniprot id: A0A375A846
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAL/histidase family.
messages: Contains an active site 4-methylidene-imidazol-5-one (MIO), which is formed autocatalytically by cyclization and dehydration of residues Ala-Ser-Gly.
messages: Cytoplasm

1401087:DAQ1742 RS18265
gene id: 1401087:DAQ1742_RS18265
uniprot id: A0A375AFE1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecY/SEC61-alpha family.
messages: Cell membrane
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Membrane
messages: The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.

1401087:DAQ1742 RS01945
gene id: 1401087:DAQ1742_RS01945
uniprot id: A0A375A668
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

1401087:DAQ1742 RS02785
gene id: 1401087:DAQ1742_RS02785
uniprot id: A0A375A6S6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MzrA family.
messages: Cell inner membrane
messages: Interacts with EnvZ.
messages: Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.

1401087:DAQ1742 RS15450
gene id: 1401087:DAQ1742_RS15450
uniprot id: A0A375ADN2
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

1401087:DAQ1742 RS06165
gene id: 1401087:DAQ1742_RS06165
uniprot id: A0A375A8J5
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS15070
gene id: 1401087:DAQ1742_RS15070
uniprot id: A0A375ADG9
names: Similarity
messages: Belongs to the skp family.

1401087:DAQ1742 RS02125
gene id: 1401087:DAQ1742_RS02125
uniprot id: A0A375A644
names: Similarity
messages: Belongs to the UPF0306 family.

1401087:DAQ1742 RS01005
gene id: 1401087:DAQ1742_RS01005
uniprot id: A0A375A5K0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the FPG family.
messages: Binds 1 zinc ion per subunit.
messages: Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
messages: Monomer.

1401087:DAQ1742 RS11250
gene id: 1401087:DAQ1742_RS11250
uniprot id: A0A375AB69
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

1401087:DAQ1742 RS16130
gene id: 1401087:DAQ1742_RS16130
uniprot id: A0A375AEC2
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the enolase family.
messages: Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
messages: Cell surface
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.
messages: Cytoplasm
messages: Secreted
messages: The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.

1401087:DAQ1742 RS07435
gene id: 1401087:DAQ1742_RS07435
uniprot id: A0A375A974
names: Similarity
messages: Belongs to the MoaD family.

1401087:DAQ1742 RS06485
gene id: 1401087:DAQ1742_RS06485
uniprot id: A0A375A8Q5
names: Similarity
messages: Belongs to the glycosyl hydrolase 5 (cellulase A) family.

1401087:DAQ1742 RS04290
gene id: 1401087:DAQ1742_RS04290
uniprot id: A0A375A7F8
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS11410
gene id: 1401087:DAQ1742_RS11410
uniprot id: A0A375ABF4
names: Similarity
messages: In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS04795
gene id: 1401087:DAQ1742_RS04795
uniprot id: A0A375A845
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
messages: Cell membrane
messages: Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.

1401087:DAQ1742 RS17860
gene id: 1401087:DAQ1742_RS17860
uniprot id: A0A375AF74
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
messages: Cytoplasm
messages: GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
messages: Monomer. Associates with the 50S ribosomal subunit.

1401087:DAQ1742 RS06050
gene id: 1401087:DAQ1742_RS06050
uniprot id: A0A375A8R2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. PdxB subfamily.
messages: Catalyzes the oxidation of erythronate-4-phosphate to 3-hydroxy-2-oxo-4-phosphonooxybutanoate.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS20200
gene id: 1401087:DAQ1742_RS20200
uniprot id: A0A375AGQ1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ArnF family.
messages: Cell inner membrane
messages: Heterodimer of ArnE and ArnF.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane.

1401087:DAQ1742 RS17605
gene id: 1401087:DAQ1742_RS17605
uniprot id: A0A375AFH1
names: Function
names: Similarity
messages: Belongs to the ribF family.
messages: Catalyzes the phosphorylation of riboflavin to FMN followed by the adenylation of FMN to FAD.

1401087:DAQ1742 RS07205
gene id: 1401087:DAQ1742_RS07205
uniprot id: A0A375A8Y6
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

1401087:DAQ1742 RS04000
gene id: 1401087:DAQ1742_RS04000
uniprot id: A0A375A759
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiK family.
messages: Cytoplasm
messages: Required for efficient ubiquinone (coenzyme Q) biosynthesis. UbiK is probably an accessory factor of Ubi enzymes and facilitates ubiquinone biosynthesis by acting as an assembly factor, a targeting factor, or both.

1401087:DAQ1742 RS05210
gene id: 1401087:DAQ1742_RS05210
uniprot id: A0A375A832
names: Similarity
messages: Belongs to the helicase family. UvrD subfamily.

1401087:DAQ1742 RS09365
gene id: 1401087:DAQ1742_RS09365
uniprot id: A0A375AAH2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the L/F-transferase family.
messages: Cytoplasm
messages: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.

1401087:DAQ1742 RS20220
gene id: 1401087:DAQ1742_RS20220
uniprot id: A0A375AH31
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
messages: Homohexamer, formed by a dimer of trimers.
messages: In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.
messages: In the N-terminal section; belongs to the Fmt family. UDP-L-Ara4N formyltransferase subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS05475
gene id: 1401087:DAQ1742_RS05475
uniprot id: A0A375A887
names: Similarity
messages: Belongs to the hemerythrin family.

1401087:DAQ1742 RS19755
gene id: 1401087:DAQ1742_RS19755
uniprot id: A0A375AGV3
names: Function
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
messages: Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

1401087:DAQ1742 RS13800
gene id: 1401087:DAQ1742_RS13800
uniprot id: A0A375AD84
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEDS family. MrdB/RodA subfamily.
messages: Cell inner membrane
messages: Membrane
messages: Peptidoglycan polymerase that is essential for cell wall elongation.

1401087:DAQ1742 RS12630
gene id: 1401087:DAQ1742_RS12630
uniprot id: A0A375AC54
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Gram-negative porin family.
messages: Cell outer membrane
messages: Homotrimer.
messages: Membrane

1401087:DAQ1742 RS20300
gene id: 1401087:DAQ1742_RS20300
uniprot id: A0A375AGT2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PstS family.
messages: Part of the ABC transporter complex PstSACB involved in phosphate import.
messages: The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS).

1401087:DAQ1742 RS14070
gene id: 1401087:DAQ1742_RS14070
uniprot id: A0A375AD42
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RcsD family.
messages: Cell inner membrane
messages: Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
messages: Interacts with RcsC and RcsB.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Phosphorylated by RcsC.

1401087:DAQ1742 RS02220
gene id: 1401087:DAQ1742_RS02220
uniprot id: A0A375A6F3
names: Similarity
messages: Belongs to the RutC family.

1401087:DAQ1742 RS15135
gene id: 1401087:DAQ1742_RS15135
uniprot id: A0A375ADM3
names: Similarity
messages: Belongs to the UPF0325 family.

1401087:DAQ1742 RS01160
gene id: 1401087:DAQ1742_RS01160
uniprot id: A0A375A5R3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the acetylglutamate kinase family. ArgB subfamily.
messages: Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS10115
gene id: 1401087:DAQ1742_RS10115
uniprot id: A0A375AAJ9
names: Similarity
messages: Belongs to the pseudouridine synthase RsuA family.

1401087:DAQ1742 RS10480
gene id: 1401087:DAQ1742_RS10480
uniprot id: A0A375AB78
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily.
messages: Cell membrane
messages: Efflux system for nickel and cobalt.
messages: Membrane

1401087:DAQ1742 RS02760
gene id: 1401087:DAQ1742_RS02760
uniprot id: A0A375A6G2
names: Cofactor
names: Similarity
messages: Belongs to the Fur family.
messages: Binds 1 Mn(2+) or Fe(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.

1401087:DAQ1742 RS01620
gene id: 1401087:DAQ1742_RS01620
uniprot id: A0A375A5Z4
names: Function
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.

1401087:DAQ1742 RS01080
gene id: 1401087:DAQ1742_RS01080
uniprot id: A0A375A6S0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS13380
gene id: 1401087:DAQ1742_RS13380
uniprot id: A0A375ACI1
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

1401087:DAQ1742 RS10025
gene id: 1401087:DAQ1742_RS10025
uniprot id: A0A375ABZ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 2 family.
messages: Periplasm

1401087:DAQ1742 RS02450
gene id: 1401087:DAQ1742_RS02450
uniprot id: A0A375A6A7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS17350
gene id: 1401087:DAQ1742_RS17350
uniprot id: A0A375AEV0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family. MurF subfamily.
messages: Cytoplasm
messages: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.

1401087:DAQ1742 RS16275
gene id: 1401087:DAQ1742_RS16275
uniprot id: A0A375AE55
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPase family.
messages: Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
messages: Cytoplasm
messages: Homohexamer.

1401087:DAQ1742 RS18340
gene id: 1401087:DAQ1742_RS18340
uniprot id: A0A375AFD8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.

1401087:DAQ1742 RS08905
gene id: 1401087:DAQ1742_RS08905
uniprot id: A0A375A9T8
names: Function
names: Similarity
names: Subunit
messages: A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild-type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity.
messages: Belongs to the RecC family.
messages: Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding.

1401087:DAQ1742 RS00560
gene id: 1401087:DAQ1742_RS00560
uniprot id: A0A375A6H8
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS14645
gene id: 1401087:DAQ1742_RS14645
uniprot id: A0A375ADH9
names: Similarity
messages: Belongs to the UPF0234 family.

1401087:DAQ1742 RS15955
gene id: 1401087:DAQ1742_RS15955
uniprot id: A0A375AE00
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS15915
gene id: 1401087:DAQ1742_RS15915
uniprot id: A0A375ADX6
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

1401087:DAQ1742 RS12530
gene id: 1401087:DAQ1742_RS12530
uniprot id: A0A375AC34
names: Function
names: Similarity
messages: Belongs to the class-I DAHP synthase family.
messages: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP).

1401087:DAQ1742 RS13710
gene id: 1401087:DAQ1742_RS13710
uniprot id: A0A375ACP4
names: Similarity
messages: Belongs to the UbiH/COQ6 family.

1401087:DAQ1742 RS00495
gene id: 1401087:DAQ1742_RS00495
uniprot id: A0A375A5P0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
messages: Cell inner membrane
messages: Forms a membrane-associated complex with FtsE.
messages: Membrane
messages: Part of the ABC transporter FtsEX involved in cellular division.

1401087:DAQ1742 RS00920
gene id: 1401087:DAQ1742_RS00920
uniprot id: A0A375A5Q2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS16105
gene id: 1401087:DAQ1742_RS16105
uniprot id: A0A375AE28
names: Cofactor
names: Similarity
messages: Belongs to the PTPS family. QueD subfamily.
messages: Binds 1 zinc ion per subunit.

1401087:DAQ1742 RS18660
gene id: 1401087:DAQ1742_RS18660
uniprot id: A0A375AFM5
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

1401087:DAQ1742 RS12265
gene id: 1401087:DAQ1742_RS12265
uniprot id: A0A375ABX8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptide transporter carbon starvation (CstA) (TC 2.A.114) family.
messages: Membrane

1401087:DAQ1742 RS16065
gene id: 1401087:DAQ1742_RS16065
uniprot id: A0A375AE18
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PAPS reductase family. CysD subfamily.
messages: Heterodimer composed of CysD, the smaller subunit, and CysN.
messages: With CysN forms the ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in sulfur assimilation pathway. APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN coupled to ATP hydrolysis by CysD.

1401087:DAQ1742 RS12850
gene id: 1401087:DAQ1742_RS12850
uniprot id: A0A375ACN5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

1401087:DAQ1742 RS05135
gene id: 1401087:DAQ1742_RS05135
uniprot id: A0A375A7Q4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsiE family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS20130
gene id: 1401087:DAQ1742_RS20130
uniprot id: A0A375AGJ8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

1401087:DAQ1742 RS17840
gene id: 1401087:DAQ1742_RS17840
uniprot id: A0A375AGI5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylosuccinate synthetase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.

1401087:DAQ1742 RS14810
gene id: 1401087:DAQ1742_RS14810
uniprot id: A0A375ADV9
names: Similarity
messages: Belongs to the asparaginase 1 family.

1401087:DAQ1742 RS04910
gene id: 1401087:DAQ1742_RS04910
uniprot id: A0A375A8Y5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polysaccharide lyase 1 family.
messages: Secreted

1401087:DAQ1742 RS06115
gene id: 1401087:DAQ1742_RS06115
uniprot id: A0A375A9M1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS01565
gene id: 1401087:DAQ1742_RS01565
uniprot id: A0A375A5W3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS17680
gene id: 1401087:DAQ1742_RS17680
uniprot id: A0A375AF57
names: Similarity
names: Subunit
messages: Homotetramer.
messages: In the C-terminal section; belongs to the homoserine dehydrogenase family.
messages: In the N-terminal section; belongs to the aspartokinase family.

1401087:DAQ1742 RS18200
gene id: 1401087:DAQ1742_RS18200
uniprot id: A0A375AFB6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the polypeptide deformylase family.
messages: Binds 1 Fe(2+) ion.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.

1401087:DAQ1742 RS05070
gene id: 1401087:DAQ1742_RS05070
uniprot id: A0A375A7Y9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BamB family.
messages: Cell outer membrane
messages: Part of the Bam complex, which is composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE.
messages: Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.

1401087:DAQ1742 RS09560
gene id: 1401087:DAQ1742_RS09560
uniprot id: A0A375A976
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HpcH/HpaI aldolase family. Citrate lyase beta subunit subfamily.
messages: Cytoplasm
messages: Oligomer with a subunit composition of (alpha,beta,gamma)6.
messages: Represents a citryl-ACP lyase.

1401087:DAQ1742 RS02755
gene id: 1401087:DAQ1742_RS02755
uniprot id: A0A375A6S8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase S24 family.
messages: Homodimer.
messages: Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.

1401087:DAQ1742 RS04860
gene id: 1401087:DAQ1742_RS04860
uniprot id: A0A375A8X6
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
messages: A lyase-type mechanism (elimination/hydration) is suggested for the cleavage of the lactyl ether bond of MurNAc 6-phosphate, with the formation of an alpha,beta-unsaturated aldehyde intermediate with (E)-stereochemistry, followed by the syn addition of water to give product.
messages: Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
messages: Homodimer.
messages: Induced by MurNAc 6-phosphate that releases the repressor MurR from the DNA. Repressed by MurR in the absence of MurNAc 6-phosphate.
messages: Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D-lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.

1401087:DAQ1742 RS03095
gene id: 1401087:DAQ1742_RS03095
uniprot id: A0A375A703
names: Similarity
messages: Belongs to the ner transcriptional regulatory family.

1401087:DAQ1742 RS05540
gene id: 1401087:DAQ1742_RS05540
uniprot id: A0A375A998
names: Similarity
messages: Belongs to the AAA ATPase family.

1401087:DAQ1742 RS13320
gene id: 1401087:DAQ1742_RS13320
uniprot id: A0A375ACZ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export.
messages: Belongs to the AcrZ family.
messages: Cell membrane
messages: Part of the AcrA-AcrB-AcrZ-TolC efflux pump, interacts directly with AcrB.

1401087:DAQ1742 RS18085
gene id: 1401087:DAQ1742_RS18085
uniprot id: A0A375AF94
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GPI family.
messages: Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.
messages: Cytoplasm

1401087:DAQ1742 RS00895
gene id: 1401087:DAQ1742_RS00895
uniprot id: A0A375A5I1
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

1401087:DAQ1742 RS06705
gene id: 1401087:DAQ1742_RS06705
uniprot id: A0A375A8L9
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the glycosyl hydrolase 2 family.
messages: Binds 1 sodium ion per monomer.
messages: Binds 2 magnesium ions per monomer.
messages: Homotetramer.

1401087:DAQ1742 RS12780
gene id: 1401087:DAQ1742_RS12780
uniprot id: A0A375ACF9
names: Similarity
messages: Belongs to the UPF0227 family.

1401087:DAQ1742 RS01555
gene id: 1401087:DAQ1742_RS01555
uniprot id: A0A375A5U5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS01440
gene id: 1401087:DAQ1742_RS01440
uniprot id: A0A375A5X2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the endonuclease V family.
messages: Cytoplasm
messages: DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.

1401087:DAQ1742 RS02830
gene id: 1401087:DAQ1742_RS02830
uniprot id: A0A375A718
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RlmG family.
messages: Cytoplasm
messages: Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.

1401087:DAQ1742 RS18210
gene id: 1401087:DAQ1742_RS18210
uniprot id: A0A375AFD1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
messages: Cytoplasm
messages: Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.

1401087:DAQ1742 RS15765
gene id: 1401087:DAQ1742_RS15765
uniprot id: A0A375ADV1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the acireductone dioxygenase (ARD) family.
messages: Binds 1 Fe(2+) cation per monomer.
messages: Binds 1 nickel ion per monomer.
messages: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
messages: Monomer.

1401087:DAQ1742 RS13860
gene id: 1401087:DAQ1742_RS13860
uniprot id: A0A375ACT6
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M20A family. DapE subfamily.
messages: Binds 2 Zn(2+) or Co(2+) ions per subunit.
messages: Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.
messages: Homodimer.

1401087:DAQ1742 RS12575
gene id: 1401087:DAQ1742_RS12575
uniprot id: A0A375ACG7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
messages: Binds 1 FMN per subunit.
messages: Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.
messages: Cell membrane
messages: Monomer.

1401087:DAQ1742 RS06100
gene id: 1401087:DAQ1742_RS06100
uniprot id: A0A375A8S2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 3 family.
messages: Periplasm

1401087:DAQ1742 RS14895
gene id: 1401087:DAQ1742_RS14895
uniprot id: A0A375ADB3
names: Similarity
messages: Belongs to the membrane-bound acyltransferase family.

1401087:DAQ1742 RS09050
gene id: 1401087:DAQ1742_RS09050
uniprot id: A0A375A9X0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS12860
gene id: 1401087:DAQ1742_RS12860
uniprot id: A0A375AC97
names: Similarity
messages: Belongs to the fabD family.

1401087:DAQ1742 RS18365
gene id: 1401087:DAQ1742_RS18365
uniprot id: A0A375AGT4
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL3 family.
messages: Methylated by PrmB.
messages: One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.

1401087:DAQ1742 RS02045
gene id: 1401087:DAQ1742_RS02045
uniprot id: A0A375A693
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 32 family.
messages: Cytoplasm
messages: Enables the bacterium to metabolize sucrose as a sole carbon source.

1401087:DAQ1742 RS18910
gene id: 1401087:DAQ1742_RS18910
uniprot id: A0A375AG12
names: Similarity
messages: Belongs to the gluconokinase GntK/GntV family.

1401087:DAQ1742 RS17865
gene id: 1401087:DAQ1742_RS17865
uniprot id: A0A375AF55
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Hfq family.
messages: Homohexamer.
messages: RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.

1401087:DAQ1742 RS09455
gene id: 1401087:DAQ1742_RS09455
uniprot id: A0A375AAD8
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS13135
gene id: 1401087:DAQ1742_RS13135
uniprot id: A0A375ACG2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliG family.
messages: Cell inner membrane
messages: FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

1401087:DAQ1742 RS07845
gene id: 1401087:DAQ1742_RS07845
uniprot id: A0A375A982
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS01150
gene id: 1401087:DAQ1742_RS01150
uniprot id: A0A375A5T2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M20A family. ArgE subfamily.
messages: Binds 2 Zn(2+) or Co(2+) ions per subunit.
messages: Catalyzes the hydrolysis of the amide bond of N(2)-acetylated L-amino acids. Cleaves the acetyl group from N-acetyl-L-ornithine to form L-ornithine, an intermediate in L-arginine biosynthesis pathway, and a branchpoint in the synthesis of polyamines.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS11255
gene id: 1401087:DAQ1742_RS11255
uniprot id: A0A375ACN7
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

1401087:DAQ1742 RS14875
gene id: 1401087:DAQ1742_RS14875
uniprot id: A0A375ADA9
names: Similarity
messages: Belongs to the YjdM family.

1401087:DAQ1742 RS18020
gene id: 1401087:DAQ1742_RS18020
uniprot id: A0A375AF99
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.

1401087:DAQ1742 RS14800
gene id: 1401087:DAQ1742_RS14800
uniprot id: A0A375AER2
names: Function
names: Similarity
messages: Belongs to the nucleoside phosphorylase PpnP family.
messages: Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.

1401087:DAQ1742 RS00845
gene id: 1401087:DAQ1742_RS00845
uniprot id: A0A375A5H2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS05690
gene id: 1401087:DAQ1742_RS05690
uniprot id: A0A375A9C4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GSP G family.
messages: Cell inner membrane
messages: Membrane
messages: Type II secretion system is composed of four main components: the outer membrane complex, the inner membrane complex, the cytoplasmic secretion ATPase and the periplasm-spanning pseudopilus. Forms homomultimers.

1401087:DAQ1742 RS13205
gene id: 1401087:DAQ1742_RS13205
uniprot id: A0A375ACX7
names: Function
names: Similarity
messages: Belongs to the AMP nucleosidase family.
messages: Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.

1401087:DAQ1742 RS02705
gene id: 1401087:DAQ1742_RS02705
uniprot id: A0A375A6R6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CutA family.
messages: Cytoplasm
messages: Homotrimer.
messages: Involved in resistance toward heavy metals.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS17190
gene id: 1401087:DAQ1742_RS17190
uniprot id: A0A375AG29
names: Cofactor
names: Similarity
messages: Belongs to the aconitase/IPM isomerase family.
messages: Binds 1 [4Fe-4S] cluster per subunit.

1401087:DAQ1742 RS05310
gene id: 1401087:DAQ1742_RS05310
uniprot id: A0A375A825
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS04455
gene id: 1401087:DAQ1742_RS04455
uniprot id: A0A375A7K7
names: Similarity
messages: Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family.

1401087:DAQ1742 RS15710
gene id: 1401087:DAQ1742_RS15710
uniprot id: A0A375AEE6
names: Function
names: Similarity
messages: Belongs to the FrsA family.
messages: Catalyzes the hydrolysis of esters.

1401087:DAQ1742 RS09345
gene id: 1401087:DAQ1742_RS09345
uniprot id: A0A375AA89
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS06525
gene id: 1401087:DAQ1742_RS06525
uniprot id: A0A375A8Q8
names: Similarity
messages: Belongs to the MotB family.

1401087:DAQ1742 RS08425
gene id: 1401087:DAQ1742_RS08425
uniprot id: A0A375A9L7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS11720
gene id: 1401087:DAQ1742_RS11720
uniprot id: A0A375ABH7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS03505
gene id: 1401087:DAQ1742_RS03505
uniprot id: A0A375A7F1
names: Similarity
messages: Belongs to the polysaccharide synthase family.

1401087:DAQ1742 RS07820
gene id: 1401087:DAQ1742_RS07820
uniprot id: A0A375A9J8
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

1401087:DAQ1742 RS06610
gene id: 1401087:DAQ1742_RS06610
uniprot id: A0A375A9X7
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.

1401087:DAQ1742 RS17730
gene id: 1401087:DAQ1742_RS17730
uniprot id: A0A375AF71
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Cell inner membrane

1401087:DAQ1742 RS01750
gene id: 1401087:DAQ1742_RS01750
uniprot id: A0A375A5Y6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RapZ-like family. RapZ subfamily.
messages: Homotrimer.
messages: Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6-phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS.

1401087:DAQ1742 RS19520
gene id: 1401087:DAQ1742_RS19520
uniprot id: A0A375AG78
names: Similarity
messages: Belongs to the FBPase class 2 family.

1401087:DAQ1742 RS16995
gene id: 1401087:DAQ1742_RS16995
uniprot id: A0A375AFZ1
names: Similarity
messages: Belongs to the myoviridae tail sheath protein family.

1401087:DAQ1742 RS11945
gene id: 1401087:DAQ1742_RS11945
uniprot id: A0A375ABZ7
names: Similarity
messages: Belongs to the glycosyl hydrolase 24 family.

1401087:DAQ1742 RS02035
gene id: 1401087:DAQ1742_RS02035
uniprot id: A0A375A631
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ExbD/TolR family.
messages: Cell inner membrane
messages: Cell membrane
messages: Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates.
messages: Membrane
messages: The accessory proteins ExbB and ExbD seem to form a complex with TonB.

1401087:DAQ1742 RS14225
gene id: 1401087:DAQ1742_RS14225
uniprot id: A0A375AD97
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS10915
gene id: 1401087:DAQ1742_RS10915
uniprot id: A0A375AAZ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliQ/MopD/SpaQ family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS12820
gene id: 1401087:DAQ1742_RS12820
uniprot id: A0A375ACC7
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family.

1401087:DAQ1742 RS13530
gene id: 1401087:DAQ1742_RS13530
uniprot id: A0A375AD34
names: Similarity
messages: Belongs to the citrate synthase family.

1401087:DAQ1742 RS12690
gene id: 1401087:DAQ1742_RS12690
uniprot id: A0A375ACD8
names: Function
names: Similarity
messages: Belongs to the glutathione peroxidase family. BtuE subfamily.
messages: Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.

1401087:DAQ1742 RS09535
gene id: 1401087:DAQ1742_RS09535
uniprot id: A0A375AAD6
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS18100
gene id: 1401087:DAQ1742_RS18100
uniprot id: A0A375AFY0
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS02675
gene id: 1401087:DAQ1742_RS02675
uniprot id: A0A375A6J9
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS18350
gene id: 1401087:DAQ1742_RS18350
uniprot id: A0A375AFX7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

1401087:DAQ1742 RS17640
gene id: 1401087:DAQ1742_RS17640
uniprot id: A0A375AFI2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS01290
gene id: 1401087:DAQ1742_RS01290
uniprot id: A0A375A643
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurB family.
messages: Cell wall formation.
messages: Cytoplasm

1401087:DAQ1742 RS18830
gene id: 1401087:DAQ1742_RS18830
uniprot id: A0A375AFQ9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GlpE family.
messages: Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
messages: Cytoplasm

1401087:DAQ1742 RS06275
gene id: 1401087:DAQ1742_RS06275
uniprot id: A0A375A8C6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
messages: Cell membrane
messages: Heterodimer of a large and a small subunit.

1401087:DAQ1742 RS18410
gene id: 1401087:DAQ1742_RS18410
uniprot id: A0A375AFF5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DsrF/TusC family.
messages: Cytoplasm
messages: Heterohexamer, formed by a dimer of trimers. The hexameric TusBCD complex contains 2 copies each of TusB, TusC and TusD. The TusBCD complex interacts with TusE.
messages: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions.

1401087:DAQ1742 RS11160
gene id: 1401087:DAQ1742_RS11160
uniprot id: A0A375ABL3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the KduI family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the isomerization of 5-dehydro-4-deoxy-D-glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate.

1401087:DAQ1742 RS19830
gene id: 1401087:DAQ1742_RS19830
uniprot id: A0A375AGS7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS06725
gene id: 1401087:DAQ1742_RS06725
uniprot id: A0A375A8L5
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS20375
gene id: 1401087:DAQ1742_RS20375
uniprot id: A0A375AGM4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.

1401087:DAQ1742 RS08630
gene id: 1401087:DAQ1742_RS08630
uniprot id: A0A375A9Y3
names: Similarity
messages: Belongs to the glycosyl hydrolase 24 family.

1401087:DAQ1742 RS12995
gene id: 1401087:DAQ1742_RS12995
uniprot id: A0A375ACA3
names: Similarity
messages: Belongs to the LacAB/RpiB family.

1401087:DAQ1742 RS20335
gene id: 1401087:DAQ1742_RS20335
uniprot id: A0A375AGN0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.

1401087:DAQ1742 RS16085
gene id: 1401087:DAQ1742_RS16085
uniprot id: A0A375AEB2
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Alpha(8)-beta(8). The alpha component is a flavoprotein, the beta component is a hemoprotein.
messages: Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family.
messages: Binds 1 FAD per subunit.
messages: Binds 1 FMN per subunit.
messages: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.
messages: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: In the N-terminal section; belongs to the flavodoxin family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS20005
gene id: 1401087:DAQ1742_RS20005
uniprot id: A0A375AGD1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS07305
gene id: 1401087:DAQ1742_RS07305
uniprot id: A0A375A964
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the malic enzymes family.
messages: Divalent metal cations. Prefers magnesium or manganese.
messages: Homotetramer.

1401087:DAQ1742 RS20355
gene id: 1401087:DAQ1742_RS20355
uniprot id: A0A375AGU1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Membrane

1401087:DAQ1742 RS01990
gene id: 1401087:DAQ1742_RS01990
uniprot id: A0A375A789
names: Domain
names: Similarity
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.

1401087:DAQ1742 RS08555
gene id: 1401087:DAQ1742_RS08555
uniprot id: A0A375AA46
names: Similarity
messages: Belongs to the myoviridae tail sheath protein family.

1401087:DAQ1742 RS04995
gene id: 1401087:DAQ1742_RS04995
uniprot id: A0A375A7W8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HesB/IscA family.
messages: Binds 2 iron ions per dimer. The dimer may bind additional iron ions.
messages: Homodimer; may form tetramers and higher multimers.
messages: Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system TrxA/TrxB.

1401087:DAQ1742 RS06445
gene id: 1401087:DAQ1742_RS06445
uniprot id: A0A375A8Q9
names: Similarity
messages: Belongs to the peptidase S66 family.

1401087:DAQ1742 RS12255
gene id: 1401087:DAQ1742_RS12255
uniprot id: A0A375ACA4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNR ribonuclease family. RNase II subfamily.
messages: Cytoplasm
messages: Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.

1401087:DAQ1742 RS16410
gene id: 1401087:DAQ1742_RS16410
uniprot id: A0A375AE88
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates the ribose of guanosine 2251 in 23S rRNA.

1401087:DAQ1742 RS18415
gene id: 1401087:DAQ1742_RS18415
uniprot id: A0A375AGU2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DsrE/TusD family.
messages: Cytoplasm
messages: Heterohexamer, formed by a dimer of trimers. The hexameric TusBCD complex contains 2 copies each of TusB, TusC and TusD. The TusBCD complex interacts with TusE.
messages: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE.

1401087:DAQ1742 RS04650
gene id: 1401087:DAQ1742_RS04650
uniprot id: A0A375A7P1
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS09490
gene id: 1401087:DAQ1742_RS09490
uniprot id: A0A375AA61
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HisA/HisF family.
messages: Cytoplasm

1401087:DAQ1742 RS20270
gene id: 1401087:DAQ1742_RS20270
uniprot id: A0A375AH43
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS17070
gene id: 1401087:DAQ1742_RS17070
uniprot id: A0A375AET3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS18445
gene id: 1401087:DAQ1742_RS18445
uniprot id: A0A375AFM1
names: Similarity
messages: Belongs to the SlyX family.

1401087:DAQ1742 RS09445
gene id: 1401087:DAQ1742_RS09445
uniprot id: A0A375AAB2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FNT transporter (TC 2.A.44) family.
messages: Membrane

1401087:DAQ1742 RS15755
gene id: 1401087:DAQ1742_RS15755
uniprot id: A0A375ADV2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the methylthioribose kinase family.
messages: Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.
messages: Homodimer.

1401087:DAQ1742 RS13795
gene id: 1401087:DAQ1742_RS13795
uniprot id: A0A375ACU5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transpeptidase family. MrdA subfamily.
messages: Catalyzes cross-linking of the peptidoglycan cell wall.
messages: Cell inner membrane

1401087:DAQ1742 RS12555
gene id: 1401087:DAQ1742_RS12555
uniprot id: A0A375ACA6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCF family. Uup subfamily.
messages: Cytoplasm
messages: Probably plays a role in ribosome assembly or function. May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps. Binds DNA and has ATPase activity.

1401087:DAQ1742 RS10795
gene id: 1401087:DAQ1742_RS10795
uniprot id: A0A375AAX5
names: Subcellular Location Annotation
messages: Secreted

1401087:DAQ1742 RS01405
gene id: 1401087:DAQ1742_RS01405
uniprot id: A0A375A662
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ThiG family.
messages: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
messages: Cytoplasm
messages: Homotetramer. Forms heterodimers with either ThiH or ThiS.

1401087:DAQ1742 RS14265
gene id: 1401087:DAQ1742_RS14265
uniprot id: A0A375ADJ8
names: Similarity
messages: Belongs to the C/M/P thioester hydrolase family.

1401087:DAQ1742 RS07410
gene id: 1401087:DAQ1742_RS07410
uniprot id: A0A375A9I4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome ubiquinol oxidase subunit 2 family.
messages: Membrane

1401087:DAQ1742 RS15060
gene id: 1401087:DAQ1742_RS15060
uniprot id: A0A375ADG3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioester dehydratase family. FabZ subfamily.
messages: Cytoplasm
messages: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.

1401087:DAQ1742 RS19345
gene id: 1401087:DAQ1742_RS19345
uniprot id: A0A375AG11
names: Cofactor
names: Similarity
messages: Belongs to the TPP enzyme family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.

1401087:DAQ1742 RS20295
gene id: 1401087:DAQ1742_RS20295
uniprot id: A0A375AH26
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell inner membrane
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.

1401087:DAQ1742 RS12940
gene id: 1401087:DAQ1742_RS12940
uniprot id: A0A375ADN5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LpxL/LpxM/LpxP family.
messages: Catalyzes the transfer of an acyl chain from an acyl-[acyl-carrier-protein] (ACP) to a Kdo(2)-lipid IV(A) to form a Kdo(2)-(acyl)-lipid IV(A).
messages: Cell inner membrane

1401087:DAQ1742 RS09405
gene id: 1401087:DAQ1742_RS09405
uniprot id: A0A375AAC7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
messages: Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
messages: Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.
messages: Cytoplasm
messages: Homodimer. The tRNA molecule binds across the dimer.

1401087:DAQ1742 RS07810
gene id: 1401087:DAQ1742_RS07810
uniprot id: A0A375A9H2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS16605
gene id: 1401087:DAQ1742_RS16605
uniprot id: A0A375AEZ9
names: Function
names: Similarity
messages: Belongs to the alanine racemase family.
messages: Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.

1401087:DAQ1742 RS10155
gene id: 1401087:DAQ1742_RS10155
uniprot id: A0A375AB37
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TrpA family.
messages: Tetramer of two alpha and two beta chains.
messages: The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.

1401087:DAQ1742 RS17960
gene id: 1401087:DAQ1742_RS17960
uniprot id: A0A375AFU0
names: Similarity
messages: Belongs to the OsmC/Ohr family.

1401087:DAQ1742 RS16170
gene id: 1401087:DAQ1742_RS16170
uniprot id: A0A375AE85
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the reversible retro-aldol cleavage of both 5-keto-4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde.
messages: Homohexamer; trimer of dimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS12855
gene id: 1401087:DAQ1742_RS12855
uniprot id: A0A375AC71
names: Function
names: Similarity
names: Subunit
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.
messages: Homotetramer.

1401087:DAQ1742 RS12350
gene id: 1401087:DAQ1742_RS12350
uniprot id: A0A375AC12
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SlyA family.
messages: Homodimer.
messages: Transcription regulator that can specifically activate or repress expression of target genes.

1401087:DAQ1742 RS09280
gene id: 1401087:DAQ1742_RS09280
uniprot id: A0A375AA85
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS19040
gene id: 1401087:DAQ1742_RS19040
uniprot id: A0A375AFS7
names: Similarity
messages: Belongs to the helicase family. UvrD subfamily.

1401087:DAQ1742 RS04090
gene id: 1401087:DAQ1742_RS04090
uniprot id: A0A375A7F9
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS11320
gene id: 1401087:DAQ1742_RS11320
uniprot id: A0A375AB91
names: Function
names: Similarity
names: Subunit
messages: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
messages: Catalyzes two reactions in de novo purine nucleotide biosynthesis. Catalyzes the breakdown of 5-aminoimidazole- (N-succinylocarboxamide) ribotide (SAICAR or 2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate) to 5-aminoimidazole-4-carboxamide ribotide (AICAR or 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide) and fumarate, and of adenylosuccinate (ADS or N(6)-(1,2-dicarboxyethyl)-AMP) to adenosine monophosphate (AMP) and fumarate.
messages: Homotetramer. Residues from neighboring subunits contribute catalytic and substrate-binding residues to each active site.

1401087:DAQ1742 RS06130
gene id: 1401087:DAQ1742_RS06130
uniprot id: A0A375A899
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

1401087:DAQ1742 RS02315
gene id: 1401087:DAQ1742_RS02315
uniprot id: A0A375A682
names: Similarity
messages: Belongs to the type-I restriction system S methylase family.

1401087:DAQ1742 RS02290
gene id: 1401087:DAQ1742_RS02290
uniprot id: A0A375A6D5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptF/LptG family.
messages: Component of the lipopolysaccharide transport and assembly complex. The LptBFG transporter is composed of two ATP-binding proteins (LptB) and two transmembrane proteins (LptF and LptG).
messages: Membrane
messages: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane.

1401087:DAQ1742 RS02255
gene id: 1401087:DAQ1742_RS02255
uniprot id: A0A375A674
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RraB family.
messages: Cytoplasm
messages: Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.
messages: Interacts with the C-terminal region of Rne.

1401087:DAQ1742 RS10560
gene id: 1401087:DAQ1742_RS10560
uniprot id: A0A375AB68
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. DHA1 family. MdtH (TC 2.A.1.2.21) subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS05065
gene id: 1401087:DAQ1742_RS05065
uniprot id: A0A375A916
names: Similarity
messages: Belongs to the YfgM family.

1401087:DAQ1742 RS09555
gene id: 1401087:DAQ1742_RS09555
uniprot id: A0A375AA69
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CitD family.
messages: Covalent carrier of the coenzyme of citrate lyase.
messages: Cytoplasm
messages: Oligomer with a subunit composition of (alpha,beta,gamma)6.

1401087:DAQ1742 RS16465
gene id: 1401087:DAQ1742_RS16465
uniprot id: A0A375AEW9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HAM1 NTPase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.
messages: Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.

1401087:DAQ1742 RS13185
gene id: 1401087:DAQ1742_RS13185
uniprot id: A0A375ACH9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliQ/MopD/SpaQ family.
messages: Cell membrane
messages: Membrane
messages: Role in flagellar biosynthesis.

1401087:DAQ1742 RS00940
gene id: 1401087:DAQ1742_RS00940
uniprot id: A0A375A5S9
names: Cofactor
names: Similarity
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily.
messages: Binds 1 Mg(2+) ion per subunit.

1401087:DAQ1742 RS10280
gene id: 1401087:DAQ1742_RS10280
uniprot id: A0A375AB46
names: Similarity
messages: Belongs to the UPF0225 family.

1401087:DAQ1742 RS04690
gene id: 1401087:DAQ1742_RS04690
uniprot id: A0A375A7V2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
messages: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.
messages: The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).

1401087:DAQ1742 RS06365
gene id: 1401087:DAQ1742_RS06365
uniprot id: A0A375A8V2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FdhE family.
messages: Cytoplasm
messages: Necessary for formate dehydrogenase activity.

1401087:DAQ1742 RS15250
gene id: 1401087:DAQ1742_RS15250
uniprot id: A0A375ADU6
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS04935
gene id: 1401087:DAQ1742_RS04935
uniprot id: A0A375A7U0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS10500
gene id: 1401087:DAQ1742_RS10500
uniprot id: A0A375AAZ7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
messages: Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS05565
gene id: 1401087:DAQ1742_RS05565
uniprot id: A0A375A865
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

1401087:DAQ1742 RS01100
gene id: 1401087:DAQ1742_RS01100
uniprot id: A0A375A5S3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecB family.
messages: Cytoplasm
messages: Homotetramer, a dimer of dimers. One homotetramer interacts with 1 SecA dimer.
messages: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.

1401087:DAQ1742 RS17425
gene id: 1401087:DAQ1742_RS17425
uniprot id: A0A375AEV2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LeuD family. LeuD type 1 subfamily.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
messages: Heterodimer of LeuC and LeuD.

1401087:DAQ1742 RS03885
gene id: 1401087:DAQ1742_RS03885
uniprot id: A0A375A710
names: Similarity
messages: Belongs to the acetyltransferase family. YpeA subfamily.

1401087:DAQ1742 RS00520
gene id: 1401087:DAQ1742_RS00520
uniprot id: A0A375A5J2
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS18330
gene id: 1401087:DAQ1742_RS18330
uniprot id: A0A375AFE3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

1401087:DAQ1742 RS07925
gene id: 1401087:DAQ1742_RS07925
uniprot id: A0A375AAR2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family.
messages: Membrane

1401087:DAQ1742 RS01835
gene id: 1401087:DAQ1742_RS01835
uniprot id: A0A375A764
names: Similarity
messages: Belongs to the peptidase S1C family.

1401087:DAQ1742 RS15850
gene id: 1401087:DAQ1742_RS15850
uniprot id: A0A375ADW3
names: Similarity
messages: Belongs to the HipA Ser/Thr kinase family.

1401087:DAQ1742 RS05605
gene id: 1401087:DAQ1742_RS05605
uniprot id: A0A375A864
names: Similarity
messages: Belongs to the antirestriction protein family.

1401087:DAQ1742 RS10965
gene id: 1401087:DAQ1742_RS10965
uniprot id: A0A375ABF0
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

1401087:DAQ1742 RS12235
gene id: 1401087:DAQ1742_RS12235
uniprot id: A0A375AC52
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS03865
gene id: 1401087:DAQ1742_RS03865
uniprot id: A0A375A728
names: Subunit
messages: Homodimer.

1401087:DAQ1742 RS09300
gene id: 1401087:DAQ1742_RS09300
uniprot id: A0A375AA22
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS07815
gene id: 1401087:DAQ1742_RS07815
uniprot id: A0A375A9S2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS12625
gene id: 1401087:DAQ1742_RS12625
uniprot id: A0A375AC17
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS07920
gene id: 1401087:DAQ1742_RS07920
uniprot id: A0A375A9D4
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS06920
gene id: 1401087:DAQ1742_RS06920
uniprot id: A0A375A8S8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

1401087:DAQ1742 RS02280
gene id: 1401087:DAQ1742_RS02280
uniprot id: A0A375A6D8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M17 family.
messages: Binds 2 manganese ions per subunit.
messages: Cytoplasm
messages: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.

1401087:DAQ1742 RS13105
gene id: 1401087:DAQ1742_RS13105
uniprot id: A0A375ACA5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the bacterial flagellin family.
messages: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
messages: Secreted

1401087:DAQ1742 RS12290
gene id: 1401087:DAQ1742_RS12290
uniprot id: A0A375ABU5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LapB family.
messages: Cell inner membrane
messages: Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane.

1401087:DAQ1742 RS03830
gene id: 1401087:DAQ1742_RS03830
uniprot id: A0A375A7F7
names: Similarity
messages: Belongs to the ribosome association toxin RatA family.

1401087:DAQ1742 RS20255
gene id: 1401087:DAQ1742_RS20255
uniprot id: A0A375AGH7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS00460
gene id: 1401087:DAQ1742_RS00460
uniprot id: A0A375A6F7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
messages: Cell inner membrane
messages: Involved in the import of queuosine (Q) precursors, required for Q precursor salvage.

1401087:DAQ1742 RS10490
gene id: 1401087:DAQ1742_RS10490
uniprot id: A0A375AAW6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TACO1 family.
messages: Cytoplasm

1401087:DAQ1742 RS16180
gene id: 1401087:DAQ1742_RS16180
uniprot id: A0A375AED6
names: Similarity
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily.
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GlucD subfamily.

1401087:DAQ1742 RS00595
gene id: 1401087:DAQ1742_RS00595
uniprot id: A0A375A5R0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS16955
gene id: 1401087:DAQ1742_RS16955
uniprot id: A0A375AEL1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. UvrA family.
messages: Cytoplasm
messages: Forms a heterotetramer with UvrB during the search for lesions.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.

1401087:DAQ1742 RS03220
gene id: 1401087:DAQ1742_RS03220
uniprot id: A0A375A6U7
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: Homodimer.
messages: May be involved in cell division.

1401087:DAQ1742 RS06345
gene id: 1401087:DAQ1742_RS06345
uniprot id: A0A375A8P3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the formate dehydrogenase gamma subunit family.
messages: Membrane

1401087:DAQ1742 RS05470
gene id: 1401087:DAQ1742_RS05470
uniprot id: A0A375A8H6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone-like protein H-NS family.
messages: nucleoid

1401087:DAQ1742 RS16935
gene id: 1401087:DAQ1742_RS16935
uniprot id: A0A375AEK8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endonuclease Cas1 family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas2 homodimer.

1401087:DAQ1742 RS12835
gene id: 1401087:DAQ1742_RS12835
uniprot id: A0A375AC61
names: Function
names: Similarity
messages: Belongs to the transglycosylase MltG family.
messages: Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.

1401087:DAQ1742 RS04405
gene id: 1401087:DAQ1742_RS04405
uniprot id: A0A375A7J6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase TrmD family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates guanosine-37 in various tRNAs.

1401087:DAQ1742 RS10550
gene id: 1401087:DAQ1742_RS10550
uniprot id: A0A375AB15
names: Similarity
messages: Belongs to the UPF0502 family.

1401087:DAQ1742 RS01515
gene id: 1401087:DAQ1742_RS01515
uniprot id: A0A375A5Y9
names: Cofactor
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. NagA family.
messages: Binds 1 divalent metal cation per subunit.

1401087:DAQ1742 RS01185
gene id: 1401087:DAQ1742_RS01185
uniprot id: A0A375A5R1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC1 family. UbiB subfamily.
messages: Cell membrane
messages: Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS00480
gene id: 1401087:DAQ1742_RS00480
uniprot id: A0A375A5F9
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily. RsmD family.
messages: Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle.

1401087:DAQ1742 RS05020
gene id: 1401087:DAQ1742_RS05020
uniprot id: A0A375A7X6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M17 family.
messages: Binds 2 manganese ions per subunit.
messages: Cytoplasm
messages: Homohexamer.
messages: Probably plays an important role in intracellular peptide degradation.

1401087:DAQ1742 RS00625
gene id: 1401087:DAQ1742_RS00625
uniprot id: A0A375A5C8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.

1401087:DAQ1742 RS17785
gene id: 1401087:DAQ1742_RS17785
uniprot id: A0A375AFL2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS17275
gene id: 1401087:DAQ1742_RS17275
uniprot id: A0A375AG57
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DNA gyrase inhibitor YacG family.
messages: Binds 1 zinc ion.
messages: Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
messages: Interacts with GyrB.

1401087:DAQ1742 RS16555
gene id: 1401087:DAQ1742_RS16555
uniprot id: A0A375AFQ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS15995
gene id: 1401087:DAQ1742_RS15995
uniprot id: A0A375AE04
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nlpA lipoprotein family.
messages: Membrane

1401087:DAQ1742 RS00440
gene id: 1401087:DAQ1742_RS00440
uniprot id: A0A375A5B9
names: Similarity
messages: Belongs to the 4-oxalocrotonate tautomerase family.

1401087:DAQ1742 RS04810
gene id: 1401087:DAQ1742_RS04810
uniprot id: A0A375A8W6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
messages: Cell membrane
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS09430
gene id: 1401087:DAQ1742_RS09430
uniprot id: A0A375AAB5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. YcaD (TC 2.A.1.26) family.
messages: Cell inner membrane
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS03975
gene id: 1401087:DAQ1742_RS03975
uniprot id: A0A375A7I3
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS09495
gene id: 1401087:DAQ1742_RS09495
uniprot id: A0A375AAC4
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Heterodimer of HisH and HisF.
messages: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.

1401087:DAQ1742 RS05945
gene id: 1401087:DAQ1742_RS05945
uniprot id: A0A375A8P1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OmpP1/FadL family.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS09425
gene id: 1401087:DAQ1742_RS09425
uniprot id: A0A375ABM9
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS15170
gene id: 1401087:DAQ1742_RS15170
uniprot id: A0A375ADI9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.
messages: Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS03555
gene id: 1401087:DAQ1742_RS03555
uniprot id: A0A375A7F3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
messages: Membrane

1401087:DAQ1742 RS18975
gene id: 1401087:DAQ1742_RS18975
uniprot id: A0A375AH25
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.
messages: Membrane

1401087:DAQ1742 RS03600
gene id: 1401087:DAQ1742_RS03600
uniprot id: A0A375A707
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
messages: Binds 3 [4Fe-4S] clusters per subunit.
messages: Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.

1401087:DAQ1742 RS14110
gene id: 1401087:DAQ1742_RS14110
uniprot id: A0A375ACY5
names: Similarity
messages: Belongs to the band 7/mec-2 family.

1401087:DAQ1742 RS05280
gene id: 1401087:DAQ1742_RS05280
uniprot id: A0A375A954
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS01435
gene id: 1401087:DAQ1742_RS01435
uniprot id: A0A375A5S8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the uroporphyrinogen decarboxylase family.
messages: Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS03070
gene id: 1401087:DAQ1742_RS03070
uniprot id: A0A375A766
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaG primase family.
messages: Binds 1 zinc ion per monomer.
messages: Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.
messages: Monomer. Interacts with DnaB.
messages: RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.

1401087:DAQ1742 RS18045
gene id: 1401087:DAQ1742_RS18045
uniprot id: A0A375AFA3
names: Cofactor
names: Similarity
messages: Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Binds 1 [3Fe-4S] cluster.
messages: Binds 1 [4Fe-4S] cluster.

1401087:DAQ1742 RS03395
gene id: 1401087:DAQ1742_RS03395
uniprot id: A0A375A716
names: Similarity
messages: Belongs to the SdhE FAD assembly factor family.

1401087:DAQ1742 RS06615
gene id: 1401087:DAQ1742_RS06615
uniprot id: A0A375A8R0
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.

1401087:DAQ1742 RS13640
gene id: 1401087:DAQ1742_RS13640
uniprot id: A0A375ACM6
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Fur family.
messages: Binds 1 Mn(2+) or Fe(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS04695
gene id: 1401087:DAQ1742_RS04695
uniprot id: A0A375A7H0
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Membrane
messages: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.
messages: The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).

1401087:DAQ1742 RS04505
gene id: 1401087:DAQ1742_RS04505
uniprot id: A0A375A7Y2
names: Similarity
messages: Belongs to the transglycosylase Slt family.

1401087:DAQ1742 RS02110
gene id: 1401087:DAQ1742_RS02110
uniprot id: A0A375A692
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endonuclease Cas1 family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas2 homodimer.

1401087:DAQ1742 RS13325
gene id: 1401087:DAQ1742_RS13325
uniprot id: A0A375ACH0
names: Similarity
messages: Belongs to the ModE family.

1401087:DAQ1742 RS12220
gene id: 1401087:DAQ1742_RS12220
uniprot id: A0A375ABS1
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS05085
gene id: 1401087:DAQ1742_RS05085
uniprot id: A0A375A7W7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M4 family.
messages: Extracellular zinc metalloprotease.
messages: Secreted

1401087:DAQ1742 RS06260
gene id: 1401087:DAQ1742_RS06260
uniprot id: A0A375A9Q5
names: Similarity
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.
messages: Heterodimer of a large and a small subunit.

1401087:DAQ1742 RS10325
gene id: 1401087:DAQ1742_RS10325
uniprot id: A0A375AC56
names: Similarity
messages: Belongs to the asparaginase 1 family.

1401087:DAQ1742 RS07460
gene id: 1401087:DAQ1742_RS07460
uniprot id: A0A375A9A2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phospholipase D family. Cardiolipin synthase subfamily. ClsB sub-subfamily.
messages: Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
messages: Cell membrane

1401087:DAQ1742 RS04410
gene id: 1401087:DAQ1742_RS04410
uniprot id: A0A375A7H9
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

1401087:DAQ1742 RS05980
gene id: 1401087:DAQ1742_RS05980
uniprot id: A0A375A8D3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the chorismate synthase family.
messages: Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
messages: Homotetramer.
messages: Reduced FMN (FMNH(2)).

1401087:DAQ1742 RS18220
gene id: 1401087:DAQ1742_RS18220
uniprot id: A0A375AFC5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MscL family.
messages: Cell inner membrane
messages: Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
messages: Homopentamer.
messages: Membrane

1401087:DAQ1742 RS02530
gene id: 1401087:DAQ1742_RS02530
uniprot id: A0A375A6G6
names: Similarity
messages: Belongs to the UbiH/COQ6 family.

1401087:DAQ1742 RS13885
gene id: 1401087:DAQ1742_RS13885
uniprot id: A0A375ACR9
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0756 family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS01205
gene id: 1401087:DAQ1742_RS01205
uniprot id: A0A375A5N8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair.
messages: Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. TatD subfamily.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS11210
gene id: 1401087:DAQ1742_RS11210
uniprot id: A0A375ABM7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS02570
gene id: 1401087:DAQ1742_RS02570
uniprot id: A0A375A6N3
names: Domain
names: Function
names: Similarity
messages: Belongs to the RecA family. RadA subfamily.
messages: DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
messages: Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.
messages: The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease.

1401087:DAQ1742 RS11065
gene id: 1401087:DAQ1742_RS11065
uniprot id: A0A375AB82
names: Function
names: Similarity
messages: Belongs to the MinE family.
messages: Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.

1401087:DAQ1742 RS14000
gene id: 1401087:DAQ1742_RS14000
uniprot id: A0A375ACV1
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS01830
gene id: 1401087:DAQ1742_RS01830
uniprot id: A0A375A5Z5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EPSP synthase family. MurA subfamily.
messages: Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.
messages: Cytoplasm

1401087:DAQ1742 RS00115
gene id: 1401087:DAQ1742_RS00115
uniprot id: A0A375A5B8
names: Function
names: Similarity
names: Subunit
messages: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis.
messages: Belongs to the YihI family.
messages: Interacts with Der.

1401087:DAQ1742 RS16365
gene id: 1401087:DAQ1742_RS16365
uniprot id: A0A375AFL4
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL9 family.
messages: Binds to the 23S rRNA.

1401087:DAQ1742 RS11305
gene id: 1401087:DAQ1742_RS11305
uniprot id: A0A375ACP6
names: Similarity
names: Subunit
messages: Belongs to the Nudix hydrolase family. NudJ subfamily.
messages: Monomer.

1401087:DAQ1742 RS12745
gene id: 1401087:DAQ1742_RS12745
uniprot id: A0A375AC37
names: Similarity
messages: Belongs to the arylamine N-acetyltransferase family.

1401087:DAQ1742 RS12280
gene id: 1401087:DAQ1742_RS12280
uniprot id: A0A375ACC8
names: Similarity
messages: Belongs to the SUI1 family.

1401087:DAQ1742 RS17335
gene id: 1401087:DAQ1742_RS17335
uniprot id: A0A375AEU6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEDS family. FtsW subfamily.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Peptidoglycan polymerase that is essential for cell division.

1401087:DAQ1742 RS19165
gene id: 1401087:DAQ1742_RS19165
uniprot id: A0A375AFW8
names: Similarity
messages: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.

1401087:DAQ1742 RS05270
gene id: 1401087:DAQ1742_RS05270
uniprot id: A0A375A844
names: Similarity
messages: Belongs to the GppA/Ppx family.

1401087:DAQ1742 RS01450
gene id: 1401087:DAQ1742_RS01450
uniprot id: A0A375A5W5
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

1401087:DAQ1742 RS07495
gene id: 1401087:DAQ1742_RS07495
uniprot id: A0A375A904
names: Function
names: Similarity
messages: Belongs to the Dus family. DusC subfamily.
messages: Belongs to the dus family.
messages: Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs.

1401087:DAQ1742 RS17525
gene id: 1401087:DAQ1742_RS17525
uniprot id: A0A375AGB1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
messages: Cytoplasm
messages: Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.

1401087:DAQ1742 RS08700
gene id: 1401087:DAQ1742_RS08700
uniprot id: A0A375A9X5
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

1401087:DAQ1742 RS09245
gene id: 1401087:DAQ1742_RS09245
uniprot id: A0A375AA71
names: Similarity
names: Subunit
messages: Belongs to the glutaredoxin family.
messages: Monomer.

1401087:DAQ1742 RS19360
gene id: 1401087:DAQ1742_RS19360
uniprot id: A0A375AGJ6
names: Similarity
messages: Belongs to the UPF0438 family.

1401087:DAQ1742 RS10580
gene id: 1401087:DAQ1742_RS10580
uniprot id: A0A375ABA0
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the PHP family.
messages: Binds 3 Zn(2+) ions per subunit.
messages: Homotrimer.

1401087:DAQ1742 RS12295
gene id: 1401087:DAQ1742_RS12295
uniprot id: A0A375ADA5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LapA family.
messages: Cell inner membrane
messages: Involved in the assembly of lipopolysaccharide (LPS).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS04070
gene id: 1401087:DAQ1742_RS04070
uniprot id: A0A375A757
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS03090
gene id: 1401087:DAQ1742_RS03090
uniprot id: A0A375A6Y3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Catalyzes the reversible oxidation of malate to oxaloacetate.
messages: Homodimer.

1401087:DAQ1742 RS17745
gene id: 1401087:DAQ1742_RS17745
uniprot id: A0A375AF13
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LysR transcriptional regulatory family.
messages: Controls the transcription of genes involved in arginine and lysine metabolism.
messages: Homodimer.

1401087:DAQ1742 RS02140
gene id: 1401087:DAQ1742_RS02140
uniprot id: A0A375A6A0
names: Cofactor
messages: Binds 1 zinc ion per subunit.

1401087:DAQ1742 RS05165
gene id: 1401087:DAQ1742_RS05165
uniprot id: A0A375A7R0
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of a tripartite efflux system composed of MdtA, MdtB and MdtC. MdtC forms a heteromultimer with MdtB.

1401087:DAQ1742 RS06220
gene id: 1401087:DAQ1742_RS06220
uniprot id: A0A375A8S7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1401087:DAQ1742 RS10260
gene id: 1401087:DAQ1742_RS10260
uniprot id: A0A375AB14
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone-like protein H-NS family.
messages: nucleoid

1401087:DAQ1742 RS06955
gene id: 1401087:DAQ1742_RS06955
uniprot id: A0A375A8Z9
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS17725
gene id: 1401087:DAQ1742_RS17725
uniprot id: A0A375AF19
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.
messages: Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.
messages: Cytoplasm
messages: Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).
messages: The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.
messages: The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1.

1401087:DAQ1742 RS19260
gene id: 1401087:DAQ1742_RS19260
uniprot id: A0A375AG81
names: Function
names: Similarity
messages: Belongs to the GppA/Ppx family. GppA subfamily.
messages: Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.

1401087:DAQ1742 RS12660
gene id: 1401087:DAQ1742_RS12660
uniprot id: A0A375AC65
names: Similarity
messages: Belongs to the YkuD family.

1401087:DAQ1742 RS18140
gene id: 1401087:DAQ1742_RS18140
uniprot id: A0A375AGP8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MetA family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.

1401087:DAQ1742 RS00335
gene id: 1401087:DAQ1742_RS00335
uniprot id: A0A375A561
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK/DnaJ/GrpE. Its activity is ATP-independent.
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Cytoplasm
messages: Monomer. Forms homomultimers of about 100-150 subunits at optimal growth temperatures. Conformation changes to monomers at high temperatures or high ionic concentrations.

1401087:DAQ1742 RS13665
gene id: 1401087:DAQ1742_RS13665
uniprot id: A0A375AE43
names: Similarity
messages: Belongs to the ROK (NagC/XylR) family.

1401087:DAQ1742 RS13560
gene id: 1401087:DAQ1742_RS13560
uniprot id: A0A375ACX1
names: Cofactor
names: Similarity
messages: Belongs to the DNA photolyase class-1 family.
messages: Belongs to the DNA photolyase family.
messages: Binds 1 FAD per subunit.

1401087:DAQ1742 RS09440
gene id: 1401087:DAQ1742_RS09440
uniprot id: A0A375AA49
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycyl radical enzyme (GRE) family. PFL subfamily.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS16225
gene id: 1401087:DAQ1742_RS16225
uniprot id: A0A375AE45
names: Caution
names: Function
names: Similarity
messages: Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
messages: DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS01890
gene id: 1401087:DAQ1742_RS01890
uniprot id: A0A375A659
names: PTM
names: Subcellular Location Annotation
messages: Activation requires a sequential transfer of a phosphate group from a His in the primary transmitter domain, to an Asp in the receiver domain and to a His in the secondary transmitter domain.
messages: Cell inner membrane

1401087:DAQ1742 RS04445
gene id: 1401087:DAQ1742_RS04445
uniprot id: A0A375A7S0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BamD family.
messages: Cell outer membrane
messages: Part of the Bam complex, which is composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE.
messages: Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery.

1401087:DAQ1742 RS14770
gene id: 1401087:DAQ1742_RS14770
uniprot id: A0A375ADA4
names: Function
messages: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited.

1401087:DAQ1742 RS05285
gene id: 1401087:DAQ1742_RS05285
uniprot id: A0A375A826
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS08525
gene id: 1401087:DAQ1742_RS08525
uniprot id: A0A375AB44
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Cell inner membrane
messages: Membrane
messages: This protein catalyzes the committed step to the synthesis of the acidic phospholipids.

1401087:DAQ1742 RS12315
gene id: 1401087:DAQ1742_RS12315
uniprot id: A0A375ABZ0
names: Similarity
messages: Belongs to the GST superfamily.

1401087:DAQ1742 RS15745
gene id: 1401087:DAQ1742_RS15745
uniprot id: A0A375ADU3
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SIS family. GmhA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
messages: Cytoplasm
messages: Homotetramer.
messages: The reaction produces a racemic mixture of D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate.

1401087:DAQ1742 RS09580
gene id: 1401087:DAQ1742_RS09580
uniprot id: A0A375ABR4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
messages: Bacterial flagellum basal body
messages: Belongs to the YcgR family.
messages: Monomer. Interacts with the flagellar basal bodies.

1401087:DAQ1742 RS20280
gene id: 1401087:DAQ1742_RS20280
uniprot id: A0A375AGM5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PhoU family.
messages: Cytoplasm
messages: Homodimer.
messages: Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions.

1401087:DAQ1742 RS17495
gene id: 1401087:DAQ1742_RS17495
uniprot id: A0A375AEX8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
messages: Interacts with the RNAP. Has a higher affinity for the core RNAP than for the holoenzyme. Its ATPase activity is stimulated by binding to RNAP.
messages: Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair.

1401087:DAQ1742 RS15330
gene id: 1401087:DAQ1742_RS15330
uniprot id: A0A375ADL2
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-I family.

1401087:DAQ1742 RS10310
gene id: 1401087:DAQ1742_RS10310
uniprot id: A0A375AB70
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the type IA topoisomerase family.
messages: Binds two Mg(2+) per subunit.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.

1401087:DAQ1742 RS01975
gene id: 1401087:DAQ1742_RS01975
uniprot id: A0A375A6I1
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS03875
gene id: 1401087:DAQ1742_RS03875
uniprot id: A0A375A7B8
names: Similarity
messages: Belongs to the UPF0178 family.

1401087:DAQ1742 RS13630
gene id: 1401087:DAQ1742_RS13630
uniprot id: A0A375ACN8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Cell inner membrane

1401087:DAQ1742 RS14135
gene id: 1401087:DAQ1742_RS14135
uniprot id: A0A375ACW4
names: Similarity
messages: Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.

1401087:DAQ1742 RS04395
gene id: 1401087:DAQ1742_RS04395
uniprot id: A0A375A7Q8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS16 family.

1401087:DAQ1742 RS19365
gene id: 1401087:DAQ1742_RS19365
uniprot id: A0A375AGA1
names: Function
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.
messages: Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.

1401087:DAQ1742 RS03635
gene id: 1401087:DAQ1742_RS03635
uniprot id: A0A375A6W5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the D-alanine--D-alanine ligase family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Cell wall formation.
messages: Cytoplasm

1401087:DAQ1742 RS02000
gene id: 1401087:DAQ1742_RS02000
uniprot id: A0A375A6A8
names: Subunit
messages: Monomer.

1401087:DAQ1742 RS19710
gene id: 1401087:DAQ1742_RS19710
uniprot id: A0A375AG80
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the pseudouridine-5'-phosphate glycosidase family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Catalyzes the reversible cleavage of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway.
messages: Homotrimer.

1401087:DAQ1742 RS06650
gene id: 1401087:DAQ1742_RS06650
uniprot id: A0A375A8V3
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS18320
gene id: 1401087:DAQ1742_RS18320
uniprot id: A0A375AFF2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS17 family.
messages: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
messages: Part of the 30S ribosomal subunit.

1401087:DAQ1742 RS04095
gene id: 1401087:DAQ1742_RS04095
uniprot id: A0A375A7R7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily.
messages: Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS16135
gene id: 1401087:DAQ1742_RS16135
uniprot id: A0A375AE31
names: Activity Regulation
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.
messages: Belongs to the CTP synthase family.
messages: CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS06080
gene id: 1401087:DAQ1742_RS06080
uniprot id: A0A375A882
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DedD family.
messages: Cell inner membrane
messages: Non-essential cell division protein that could be required for efficient cell constriction.
messages: The SPOR domain binds septal peptidoglycans and is required to target DedD to the septal ring.

1401087:DAQ1742 RS18135
gene id: 1401087:DAQ1742_RS18135
uniprot id: A0A375AFA6
names: Similarity
messages: Belongs to the malate synthase family.

1401087:DAQ1742 RS17685
gene id: 1401087:DAQ1742_RS17685
uniprot id: A0A375AFJ2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
messages: Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS03770
gene id: 1401087:DAQ1742_RS03770
uniprot id: A0A375A706
names: Similarity
messages: Belongs to the asparagine synthetase family.

1401087:DAQ1742 RS18690
gene id: 1401087:DAQ1742_RS18690
uniprot id: A0A375AFM9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DamX family.
messages: Cell inner membrane
messages: Non-essential cell division protein.
messages: The SPOR domain binds septal peptidoglycans and is required to target DamX to the septal ring.

1401087:DAQ1742 RS19505
gene id: 1401087:DAQ1742_RS19505
uniprot id: A0A375AG40
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ZapB family.
messages: Cytoplasm
messages: Homodimer. The ends of the coiled-coil dimer bind to each other, forming polymers. Interacts with FtsZ.
messages: Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.

1401087:DAQ1742 RS02480
gene id: 1401087:DAQ1742_RS02480
uniprot id: A0A375A6F1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the aldolase class II family. RhaD subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS02485
gene id: 1401087:DAQ1742_RS02485
uniprot id: A0A375A6H9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the rhamnose isomerase family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Catalyzes the interconversion of L-rhamnose and L-rhamnulose.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS19245
gene id: 1401087:DAQ1742_RS19245
uniprot id: A0A375AFY7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Rho family.
messages: Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.
messages: Homohexamer. The homohexamer assembles into an open ring structure.

1401087:DAQ1742 RS07290
gene id: 1401087:DAQ1742_RS07290
uniprot id: A0A375A8X2
names: Similarity
messages: Belongs to the acyl coenzyme A hydrolase family.

1401087:DAQ1742 RS11295
gene id: 1401087:DAQ1742_RS11295
uniprot id: A0A375ABL5
names: Cofactor
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.

1401087:DAQ1742 RS02665
gene id: 1401087:DAQ1742_RS02665
uniprot id: A0A375A6F0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

1401087:DAQ1742 RS09750
gene id: 1401087:DAQ1742_RS09750
uniprot id: A0A375AAH0
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic/mitochondrial release factor family.
messages: Cytoplasm
messages: Methylated by PrmC. Methylation increases the termination efficiency of RF1.
messages: Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.

1401087:DAQ1742 RS06840
gene id: 1401087:DAQ1742_RS06840
uniprot id: A0A375A8N4
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS15075
gene id: 1401087:DAQ1742_RS15075
uniprot id: A0A375ADG2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BamA family.
messages: Cell outer membrane
messages: Part of the Bam complex, which is composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE.
messages: Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery.

1401087:DAQ1742 RS14675
gene id: 1401087:DAQ1742_RS14675
uniprot id: A0A375AD86
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transketolase family. DXPS subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).
messages: Homodimer.

1401087:DAQ1742 RS14610
gene id: 1401087:DAQ1742_RS14610
uniprot id: A0A375AD95
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS18025
gene id: 1401087:DAQ1742_RS18025
uniprot id: A0A375AF83
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
messages: Cell membrane
messages: Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The autoendoproteolytic cleavage occurs by a canonical serine protease mechanism, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain. During this reaction, the Ser that is part of the protease active site of the proenzyme becomes the pyruvoyl prosthetic group, which constitutes an essential element of the active site of the mature decarboxylase.

1401087:DAQ1742 RS17215
gene id: 1401087:DAQ1742_RS17215
uniprot id: A0A375AEP7
names: Function
messages: Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).

1401087:DAQ1742 RS00590
gene id: 1401087:DAQ1742_RS00590
uniprot id: A0A375A5E9
names: Similarity
messages: Belongs to the bacterial solute-binding protein 1 family.

1401087:DAQ1742 RS16615
gene id: 1401087:DAQ1742_RS16615
uniprot id: A0A375AEE3
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

1401087:DAQ1742 RS04645
gene id: 1401087:DAQ1742_RS04645
uniprot id: A0A375A7G0
names: Function
names: Similarity
messages: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits).
messages: In the C-terminal section; belongs to the transpeptidase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 51 family.

1401087:DAQ1742 RS09095
gene id: 1401087:DAQ1742_RS09095
uniprot id: A0A375AA41
names: Function
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.
messages: Catalyzes the ATP-dependent phosphorylation of fructose-l-phosphate to fructose-l,6-bisphosphate.

1401087:DAQ1742 RS10465
gene id: 1401087:DAQ1742_RS10465
uniprot id: A0A375AAS1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-3 integral membrane protein family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS03960
gene id: 1401087:DAQ1742_RS03960
uniprot id: A0A375A748
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS16145
gene id: 1401087:DAQ1742_RS16145
uniprot id: A0A375AE26
names: Function
names: Similarity
messages: Belongs to the relA/spoT family.
messages: In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.

1401087:DAQ1742 RS00025
gene id: 1401087:DAQ1742_RS00025
uniprot id: A0A375A5A5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72) family.
messages: Cell membrane
messages: Membrane
messages: Responsible for the low-affinity transport of potassium into the cell. Likely operates as a K(+):H(+) symporter.

1401087:DAQ1742 RS05950
gene id: 1401087:DAQ1742_RS05950
uniprot id: A0A375A8H4
names: Similarity
messages: Belongs to the UPF0381 family.

1401087:DAQ1742 RS04620
gene id: 1401087:DAQ1742_RS04620
uniprot id: A0A375A7G2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DksA family.
messages: Cytoplasm
messages: Interacts directly with the RNA polymerase.
messages: Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.

1401087:DAQ1742 RS04050
gene id: 1401087:DAQ1742_RS04050
uniprot id: A0A375A767
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NrfD family.
messages: Membrane

1401087:DAQ1742 RS17415
gene id: 1401087:DAQ1742_RS17415
uniprot id: A0A375AFC9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS02495
gene id: 1401087:DAQ1742_RS02495
uniprot id: A0A375A6M2
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Activates expression of the rhaBAD and rhaT operons.
messages: Binds DNA as a dimer.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS18130
gene id: 1401087:DAQ1742_RS18130
uniprot id: A0A375AFL5
names: Cofactor
messages: Can also use Mn(2+) ion.

1401087:DAQ1742 RS10090
gene id: 1401087:DAQ1742_RS10090
uniprot id: A0A375AAP0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type IA topoisomerase family.
messages: Monomer.
messages: Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.

1401087:DAQ1742 RS01460
gene id: 1401087:DAQ1742_RS01460
uniprot id: A0A375A617
names: Similarity
messages: Belongs to the GARS family.

1401087:DAQ1742 RS07150
gene id: 1401087:DAQ1742_RS07150
uniprot id: A0A375A8X8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cdh family.
messages: Membrane

1401087:DAQ1742 RS18030
gene id: 1401087:DAQ1742_RS18030
uniprot id: A0A375AFE0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Membrane

1401087:DAQ1742 RS01430
gene id: 1401087:DAQ1742_RS01430
uniprot id: A0A375A613
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Nudix hydrolase family. NudC subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Divalent metal cations. Mg(2+) or Mn(2+).
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: mRNA decapping enzyme that specifically removes the nicotinamide adenine dinucleotide (NAD) cap from a subset of mRNAs by hydrolyzing the diphosphate linkage to produce nicotinamide mononucleotide (NMN) and 5' monophosphate mRNA. The NAD-cap is present at the 5'-end of some mRNAs and stabilizes RNA against 5'-processing. Has preference for mRNAs with a 5'-end purine. Catalyzes the hydrolysis of a broad range of dinucleotide pyrophosphates.

1401087:DAQ1742 RS05960
gene id: 1401087:DAQ1742_RS05960
uniprot id: A0A375A9I5
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.

1401087:DAQ1742 RS10035
gene id: 1401087:DAQ1742_RS10035
uniprot id: A0A375AAY9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the arabinose isomerase family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Catalyzes the conversion of L-arabinose to L-ribulose.
messages: Homohexamer.

1401087:DAQ1742 RS09655
gene id: 1401087:DAQ1742_RS09655
uniprot id: A0A375AA91
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MukF family.
messages: Interacts, and probably forms a ternary complex, with MukE and MukB via its C-terminal region. The complex formation is stimulated by calcium or magnesium. It is required for an interaction between MukE and MukB.
messages: Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.
messages: nucleoid

1401087:DAQ1742 RS06005
gene id: 1401087:DAQ1742_RS06005
uniprot id: A0A375A869
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS19145
gene id: 1401087:DAQ1742_RS19145
uniprot id: A0A375AGF0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS03425
gene id: 1401087:DAQ1742_RS03425
uniprot id: A0A375A776
names: Similarity
messages: Belongs to the RecJ family.

1401087:DAQ1742 RS19025
gene id: 1401087:DAQ1742_RS19025
uniprot id: A0A375AH38
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EamA transporter family.
messages: Membrane

1401087:DAQ1742 RS08200
gene id: 1401087:DAQ1742_RS08200
uniprot id: A0A375A9G7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CopC family.
messages: Involved in copper resistance.
messages: Periplasm

1401087:DAQ1742 RS03760
gene id: 1401087:DAQ1742_RS03760
uniprot id: A0A375A7J9
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.

1401087:DAQ1742 RS00215
gene id: 1401087:DAQ1742_RS00215
uniprot id: A0A375A535
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS15790
gene id: 1401087:DAQ1742_RS15790
uniprot id: A0A375AED1
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M20 family.
messages: Binds 2 Zn(2+) ions per subunit.

1401087:DAQ1742 RS04775
gene id: 1401087:DAQ1742_RS04775
uniprot id: A0A375A7I0
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

1401087:DAQ1742 RS04535
gene id: 1401087:DAQ1742_RS04535
uniprot id: A0A375A7S7
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
messages: Heterooctamer of four alpha and four beta chains arranged as a tetramer of alpha/beta heterodimers.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain.

1401087:DAQ1742 RS07400
gene id: 1401087:DAQ1742_RS07400
uniprot id: A0A375A924
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the gluconeogenesis factor family.
messages: Cytoplasm
messages: Required for morphogenesis under gluconeogenic growth conditions.

1401087:DAQ1742 RS16265
gene id: 1401087:DAQ1742_RS16265
uniprot id: A0A375AEN9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PlsY family.
messages: Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
messages: Cell membrane
messages: Probably interacts with PlsX.

1401087:DAQ1742 RS09510
gene id: 1401087:DAQ1742_RS09510
uniprot id: A0A375AAR9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the histidinol dehydrogenase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.
messages: Homodimer.

1401087:DAQ1742 RS12305
gene id: 1401087:DAQ1742_RS12305
uniprot id: A0A375ACB3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GTP cyclohydrolase II family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
messages: Homodimer.

1401087:DAQ1742 RS12830
gene id: 1401087:DAQ1742_RS12830
uniprot id: A0A375ACG6
names: Function
names: Similarity
messages: Belongs to the thymidylate kinase family.
messages: Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.

1401087:DAQ1742 RS07355
gene id: 1401087:DAQ1742_RS07355
uniprot id: A0A375A979
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrB family.
messages: Cytoplasm
messages: Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.
messages: The beta-hairpin motif is involved in DNA binding.

1401087:DAQ1742 RS13505
gene id: 1401087:DAQ1742_RS13505
uniprot id: A0A375AD40
names: Function
names: Similarity
messages: Belongs to the alpha-ketoglutarate dehydrogenase family.
messages: E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).

1401087:DAQ1742 RS07900
gene id: 1401087:DAQ1742_RS07900
uniprot id: A0A375A9B1
names: Similarity
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS06305
gene id: 1401087:DAQ1742_RS06305
uniprot id: A0A375A9R3
names: Similarity
messages: Belongs to the HypD family.

1401087:DAQ1742 RS10485
gene id: 1401087:DAQ1742_RS10485
uniprot id: A0A375AAR5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvC family.
messages: Binds 2 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Homodimer which binds Holliday junction (HJ) DNA. The HJ becomes 2-fold symmetrical on binding to RuvC with unstacked arms; it has a different conformation from HJ DNA in complex with RuvA. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.
messages: The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair. Endonuclease that resolves HJ intermediates. Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction. The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'. Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange. HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.

1401087:DAQ1742 RS02880
gene id: 1401087:DAQ1742_RS02880
uniprot id: A0A375A6R2
names: Cofactor
names: Similarity
messages: Belongs to the ApbE family.
messages: Magnesium. Can also use manganese.

1401087:DAQ1742 RS17515
gene id: 1401087:DAQ1742_RS17515
uniprot id: A0A375AF75
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
messages: Periplasm
messages: The PPIase activity resides only in the second parvulin domain. The N-terminal region and the C-terminal tail are necessary and sufficient for the chaperone activity of SurA. The PPIase activity is dispensable for SurA to function as a chaperone. The N-terminal region and the C-terminal tail are also required for porin recognition.

1401087:DAQ1742 RS11480
gene id: 1401087:DAQ1742_RS11480
uniprot id: A0A375ABV6
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS17875
gene id: 1401087:DAQ1742_RS17875
uniprot id: A0A375AFN3
names: Function
names: Similarity
messages: Belongs to the DNA mismatch repair MutL/HexB family.
messages: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.

1401087:DAQ1742 RS14600
gene id: 1401087:DAQ1742_RS14600
uniprot id: A0A375AD51
names: Similarity
messages: Belongs to the BolA/IbaG family.

1401087:DAQ1742 RS04760
gene id: 1401087:DAQ1742_RS04760
uniprot id: A0A375A8V4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DEAD box helicase family. SrmB subfamily.
messages: Cytoplasm
messages: DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity.
messages: Interacts with the 50S ribosomal subunit.

1401087:DAQ1742 RS14015
gene id: 1401087:DAQ1742_RS14015
uniprot id: A0A375AD36
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS18395
gene id: 1401087:DAQ1742_RS18395
uniprot id: A0A375AFL1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

1401087:DAQ1742 RS16020
gene id: 1401087:DAQ1742_RS16020
uniprot id: A0A375ADZ7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoS subfamily.
messages: Cytoplasm
messages: Interacts with the RNA polymerase core enzyme.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.

1401087:DAQ1742 RS02620
gene id: 1401087:DAQ1742_RS02620
uniprot id: A0A375A6P5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the acireductone dioxygenase (ARD) family.
messages: Binds 1 Fe(2+) cation per monomer.
messages: Binds 1 nickel ion per monomer.
messages: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
messages: Monomer.

1401087:DAQ1742 RS17520
gene id: 1401087:DAQ1742_RS17520
uniprot id: A0A375AEX3
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PdxA family.
messages: Binds 1 divalent metal cation per subunit. Can use ions such as Zn(2+), Mg(2+) or Co(2+).
messages: Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
messages: Cytoplasm
messages: Homodimer.
messages: The active site is located at the dimer interface.

1401087:DAQ1742 RS00015
gene id: 1401087:DAQ1742_RS00015
uniprot id: A0A375A548
names: Similarity
names: Subunit
messages: Belongs to the ViaA family.
messages: Possible formation of a ternary complex RavA-ViaA-CadA.

1401087:DAQ1742 RS09660
gene id: 1401087:DAQ1742_RS09660
uniprot id: A0A375AAF3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MukE family.
messages: Interacts, and probably forms a ternary complex, with MukF and MukB. The complex formation is stimulated by calcium or magnesium.
messages: Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF.
messages: nucleoid

1401087:DAQ1742 RS04895
gene id: 1401087:DAQ1742_RS04895
uniprot id: A0A375A867
names: Similarity
messages: Belongs to the P(II) protein family.

1401087:DAQ1742 RS04325
gene id: 1401087:DAQ1742_RS04325
uniprot id: A0A375A7P2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
messages: Cytoplasm

1401087:DAQ1742 RS13990
gene id: 1401087:DAQ1742_RS13990
uniprot id: A0A375ACY0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS00340
gene id: 1401087:DAQ1742_RS00340
uniprot id: A0A375A596
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

1401087:DAQ1742 RS19500
gene id: 1401087:DAQ1742_RS19500
uniprot id: A0A375AHB2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RraA family.
messages: Cytoplasm
messages: Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.
messages: Homotrimer. Binds to both RNA-binding sites in the C-terminal region of Rne and to RhlB.

1401087:DAQ1742 RS20030
gene id: 1401087:DAQ1742_RS20030
uniprot id: A0A375AHK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial glucokinase family.
messages: Cytoplasm

1401087:DAQ1742 RS01105
gene id: 1401087:DAQ1742_RS01105
uniprot id: A0A375A5L8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Cytoplasm

1401087:DAQ1742 RS15040
gene id: 1401087:DAQ1742_RS15040
uniprot id: A0A375ADZ3
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS19250
gene id: 1401087:DAQ1742_RS19250
uniprot id: A0A375AG13
names: Similarity
messages: Belongs to the thioredoxin family.

1401087:DAQ1742 RS14230
gene id: 1401087:DAQ1742_RS14230
uniprot id: A0A375ACX9
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type B subfamily.
messages: Part of the 50S ribosomal subunit.

1401087:DAQ1742 RS14750
gene id: 1401087:DAQ1742_RS14750
uniprot id: A0A375AD83
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the branched chain amino acid transporter family.
messages: Cell inner membrane
messages: Component of the transport system for branched-chain amino acids.
messages: Membrane

1401087:DAQ1742 RS09130
gene id: 1401087:DAQ1742_RS09130
uniprot id: A0A375AA56
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.
messages: Cell membrane
messages: Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites.
messages: Membrane

1401087:DAQ1742 RS01665
gene id: 1401087:DAQ1742_RS01665
uniprot id: A0A375A5Y2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MreD family.
messages: Cell inner membrane
messages: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins.
messages: Membrane

1401087:DAQ1742 RS03530
gene id: 1401087:DAQ1742_RS03530
uniprot id: A0A375A7A4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons.

1401087:DAQ1742 RS03275
gene id: 1401087:DAQ1742_RS03275
uniprot id: A0A375A6V4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphopentomutase family.
messages: Binds 1 or 2 manganese ions.
messages: Cytoplasm
messages: Phosphotransfer between the C1 and C5 carbon atoms of pentose.

1401087:DAQ1742 RS03075
gene id: 1401087:DAQ1742_RS03075
uniprot id: A0A375A6Z3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS21 family.

1401087:DAQ1742 RS15775
gene id: 1401087:DAQ1742_RS15775
uniprot id: A0A375ADU7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the aldolase class II family. MtnB subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).

1401087:DAQ1742 RS06385
gene id: 1401087:DAQ1742_RS06385
uniprot id: A0A375A8M2
names: Similarity
messages: Belongs to the precorrin methyltransferase family.

1401087:DAQ1742 RS10415
gene id: 1401087:DAQ1742_RS10415
uniprot id: A0A375AAR1
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS19295
gene id: 1401087:DAQ1742_RS19295
uniprot id: A0A375AFZ9
names: Function
names: Similarity
messages: In the C-terminal section; belongs to the aldehyde dehydrogenase family.
messages: In the N-terminal section; belongs to the proline dehydrogenase family.
messages: Oxidizes proline to glutamate for use as a carbon and nitrogen source.

1401087:DAQ1742 RS09155
gene id: 1401087:DAQ1742_RS09155
uniprot id: A0A375AA82
names: Function
names: Similarity
messages: Belongs to the esterase D family.
messages: Serine hydrolase involved in the detoxification of formaldehyde.

1401087:DAQ1742 RS18730
gene id: 1401087:DAQ1742_RS18730
uniprot id: A0A375AFM0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits).
messages: In the C-terminal section; belongs to the transpeptidase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 51 family.
messages: Membrane

1401087:DAQ1742 RS01950
gene id: 1401087:DAQ1742_RS01950
uniprot id: A0A375A698
names: Function
names: Similarity
names: Subunit
messages: Acts on ADP-mannose and ADP-glucose as well as ADP-ribose. Prevents glycogen biosynthesis. The reaction catalyzed by this enzyme is a limiting step of the gluconeogenic process.
messages: Belongs to the Nudix hydrolase family. NudF subfamily.
messages: Homodimer.

1401087:DAQ1742 RS13400
gene id: 1401087:DAQ1742_RS13400
uniprot id: A0A375ACU3
names: Function
names: Similarity
messages: Belongs to the class-I DAHP synthase family.
messages: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP).

1401087:DAQ1742 RS04020
gene id: 1401087:DAQ1742_RS04020
uniprot id: A0A375A743
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS17475
gene id: 1401087:DAQ1742_RS17475
uniprot id: A0A375AG97
names: Cofactor
names: Similarity
messages: Belongs to the TPP enzyme family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.

1401087:DAQ1742 RS16945
gene id: 1401087:DAQ1742_RS16945
uniprot id: A0A375AEL2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS05160
gene id: 1401087:DAQ1742_RS05160
uniprot id: A0A375A816
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. TCR/Tet family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS15050
gene id: 1401087:DAQ1742_RS15050
uniprot id: A0A375ADE7
names: Function
names: Similarity
messages: Belongs to the LpxB family.
messages: Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.

1401087:DAQ1742 RS17930
gene id: 1401087:DAQ1742_RS17930
uniprot id: A0A375AFB0
names: Similarity
messages: Belongs to the NtaA/SnaA/DszA monooxygenase family.

1401087:DAQ1742 RS11135
gene id: 1401087:DAQ1742_RS11135
uniprot id: A0A375ABI9
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS18825
gene id: 1401087:DAQ1742_RS18825
uniprot id: A0A375AH08
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Rhomboid-type serine protease that catalyzes intramembrane proteolysis.

1401087:DAQ1742 RS13960
gene id: 1401087:DAQ1742_RS13960
uniprot id: A0A375ACV7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial solute-binding protein 2 family.
messages: Periplasm
messages: The ABC transporter complex is composed of one ATP-binding protein (MglA), two transmembrane proteins (MglC) and a solute-binding protein (MglB).

1401087:DAQ1742 RS00720
gene id: 1401087:DAQ1742_RS00720
uniprot id: A0A375A5N7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily.
messages: Cell inner membrane
messages: Divalent metal cation transporter which exports Zn(2+), Cd(2+) and possibly Fe(2+). May be involved in zinc and iron detoxification by efflux.
messages: Homodimer.
messages: Membrane

1401087:DAQ1742 RS01855
gene id: 1401087:DAQ1742_RS01855
uniprot id: A0A375A645
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL13 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

1401087:DAQ1742 RS11435
gene id: 1401087:DAQ1742_RS11435
uniprot id: A0A375ABU7
names: Similarity
messages: Belongs to the GST superfamily.

1401087:DAQ1742 RS16005
gene id: 1401087:DAQ1742_RS16005
uniprot id: A0A375ADZ9
names: Similarity
messages: Belongs to the tRNA methyltransferase O family.

1401087:DAQ1742 RS16070
gene id: 1401087:DAQ1742_RS16070
uniprot id: A0A375AE11
names: Caution
names: Function
names: Similarity
messages: Belongs to the precorrin methyltransferase family.
messages: In the C-terminal section; belongs to the precorrin methyltransferase family.
messages: In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.

1401087:DAQ1742 RS01995
gene id: 1401087:DAQ1742_RS01995
uniprot id: A0A375A678
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FtsP family.
messages: Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress.
messages: Periplasm

1401087:DAQ1742 RS14730
gene id: 1401087:DAQ1742_RS14730
uniprot id: A0A375AD82
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the QueA family.
messages: Cytoplasm
messages: Monomer.
messages: Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).

1401087:DAQ1742 RS10540
gene id: 1401087:DAQ1742_RS10540
uniprot id: A0A375AAX7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS03155
gene id: 1401087:DAQ1742_RS03155
uniprot id: A0A375A6X4
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: Cell membrane
messages: Homohexamer.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the central section; belongs to the AAA ATPase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS00120
gene id: 1401087:DAQ1742_RS00120
uniprot id: A0A375A545
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the anaerobic coproporphyrinogen-III oxidase family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS01535
gene id: 1401087:DAQ1742_RS01535
uniprot id: A0A375A630
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS13125
gene id: 1401087:DAQ1742_RS13125
uniprot id: A0A375ACC2
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliE family.

1401087:DAQ1742 RS19215
gene id: 1401087:DAQ1742_RS19215
uniprot id: A0A375AG71
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS19760
gene id: 1401087:DAQ1742_RS19760
uniprot id: A0A375AG90
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS05055
gene id: 1401087:DAQ1742_RS05055
uniprot id: A0A375A7Z3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspG family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.

1401087:DAQ1742 RS18055
gene id: 1401087:DAQ1742_RS18055
uniprot id: A0A375AFA1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FrdD family.
messages: Cell membrane
messages: Part of an enzyme complex containing four subunits: a flavoprotein (FrdA), an iron-sulfur protein (FrdB), and two hydrophobic anchor proteins (FrdC and FrdD).
messages: Two distinct, membrane-bound, FAD-containing enzymes are responsible for the catalysis of fumarate and succinate interconversion; fumarate reductase is used in anaerobic growth, and succinate dehydrogenase is used in aerobic growth. Anchors the catalytic components of the fumarate reductase complex to the cell inner membrane, binds quinones.

1401087:DAQ1742 RS16320
gene id: 1401087:DAQ1742_RS16320
uniprot id: A0A375AFK3
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS17505
gene id: 1401087:DAQ1742_RS17505
uniprot id: A0A375AF24
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cell inner membrane
messages: Homodimer.
messages: Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.
messages: The transmembrane domain is a dimerization domain.

1401087:DAQ1742 RS12550
gene id: 1401087:DAQ1742_RS12550
uniprot id: A0A375ACH5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PqiA family.
messages: Component of a transport pathway that contributes to membrane integrity.
messages: Membrane

1401087:DAQ1742 RS18235
gene id: 1401087:DAQ1742_RS18235
uniprot id: A0A375AFH6
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL17 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L32.

1401087:DAQ1742 RS02815
gene id: 1401087:DAQ1742_RS02815
uniprot id: A0A375A6P1
names: Similarity
messages: Belongs to the UxaA family.

1401087:DAQ1742 RS20120
gene id: 1401087:DAQ1742_RS20120
uniprot id: A0A375AGH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the beta sliding clamp family.
messages: Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.
messages: Cytoplasm
messages: Forms a ring-shaped head-to-tail homodimer around DNA.

1401087:DAQ1742 RS09180
gene id: 1401087:DAQ1742_RS09180
uniprot id: A0A375AA66
names: Similarity
names: Subunit
messages: Belongs to the GTP cyclohydrolase I family.
messages: Homopolymer.
messages: Toroid-shaped homodecamer, composed of two pentamers of five dimers.

1401087:DAQ1742 RS07330
gene id: 1401087:DAQ1742_RS07330
uniprot id: A0A375A953
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
messages: Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only aminotransferase known to utilize SAM as an amino donor.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS01180
gene id: 1401087:DAQ1742_RS01180
uniprot id: A0A375A6U5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiJ family.
messages: Cytoplasm
messages: Required for ubiquinone (coenzyme Q) biosynthesis. Binds hydrophobic ubiquinone biosynthetic intermediates via its SCP2 domain and is essential for the stability of the Ubi complex. May constitute a docking platform where Ubi enzymes assemble and access their SCP2-bound polyprenyl substrates.

1401087:DAQ1742 RS17710
gene id: 1401087:DAQ1742_RS17710
uniprot id: A0A375AFP0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the YjjX NTPase family.
messages: Binds 1 divalent metal cation per subunit; can use either Mg(2+) or Mn(2+).
messages: Homodimer.
messages: Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.

1401087:DAQ1742 RS12340
gene id: 1401087:DAQ1742_RS12340
uniprot id: A0A375ABV5
names: Function
names: Similarity
messages: Belongs to the anhydro-N-acetylmuramic acid kinase family.
messages: Catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.

1401087:DAQ1742 RS10150
gene id: 1401087:DAQ1742_RS10150
uniprot id: A0A375AAR7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TrpB family.
messages: Tetramer of two alpha and two beta chains.
messages: The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.

1401087:DAQ1742 RS09335
gene id: 1401087:DAQ1742_RS09335
uniprot id: A0A375AAJ1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HCP family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Binds 1 hybrid [4Fe-2O-2S] cluster.
messages: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
messages: Cytoplasm

1401087:DAQ1742 RS09885
gene id: 1401087:DAQ1742_RS09885
uniprot id: A0A375AAK9
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M10B family.
messages: Binds 1 zinc ion per subunit.

1401087:DAQ1742 RS12520
gene id: 1401087:DAQ1742_RS12520
uniprot id: A0A375ACF1
names: Function
names: Similarity
messages: Belongs to the PEP-utilizing enzyme family.
messages: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate.

1401087:DAQ1742 RS03995
gene id: 1401087:DAQ1742_RS03995
uniprot id: A0A375A7F4
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS13315
gene id: 1401087:DAQ1742_RS13315
uniprot id: A0A375ACK8
names: Similarity
messages: Belongs to the bacterial solute-binding protein ModA family.

1401087:DAQ1742 RS09795
gene id: 1401087:DAQ1742_RS09795
uniprot id: A0A375AAC1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MGMT family.
messages: Cytoplasm
messages: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
messages: This enzyme catalyzes only one turnover and therefore is not strictly catalytic. According to one definition, an enzyme is a biocatalyst that acts repeatedly and over many reaction cycles.

1401087:DAQ1742 RS14620
gene id: 1401087:DAQ1742_RS14620
uniprot id: A0A375AD81
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the heme-copper respiratory oxidase family.
messages: Membrane
messages: The cytochrome bo(3) ubiquinol oxidase complex is a heterooctamer of two A chains, two B chains, two C chains and two D chains.

1401087:DAQ1742 RS19515
gene id: 1401087:DAQ1742_RS19515
uniprot id: A0A375AG38
names: Activity Regulation
names: Function
names: Similarity
names: Subunit
messages: Activity of this regulatory enzyme is affected by several metabolites. Allosterically and non-competitively inhibited by fructose 1,6-bisphosphate (FBP) and unphosphorylated phosphocarrier protein EIIA-Glc (III-Glc), an integral component of the bacterial phosphotransferase (PTS) system.
messages: Belongs to the FGGY kinase family.
messages: Homotetramer and homodimer (in equilibrium). Heterodimer with EIIA-Glc. Binds 1 zinc ion per glycerol kinase EIIA-Glc dimer. The zinc ion is important for dimerization.
messages: Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn-glycerol 3-phosphate.

1401087:DAQ1742 RS01940
gene id: 1401087:DAQ1742_RS01940
uniprot id: A0A375A777
names: Similarity
messages: Belongs to the DODA-type extradiol aromatic ring-opening dioxygenase family.

1401087:DAQ1742 RS06010
gene id: 1401087:DAQ1742_RS06010
uniprot id: A0A375A9K1
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

1401087:DAQ1742 RS15735
gene id: 1401087:DAQ1742_RS15735
uniprot id: A0A375AEC6
names: Similarity
messages: Belongs to the YkuD family.

1401087:DAQ1742 RS08025
gene id: 1401087:DAQ1742_RS08025
uniprot id: A0A375AAT4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MgtC/SapB family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS14585
gene id: 1401087:DAQ1742_RS14585
uniprot id: A0A375ADC0
names: Function
names: Similarity
names: Subunit
messages: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
messages: Belongs to the ClpX chaperone family.
messages: Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

1401087:DAQ1742 RS06210
gene id: 1401087:DAQ1742_RS06210
uniprot id: A0A375A9P3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the complex I 75 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Composed of 13 different subunits. Subunits NuoCD, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1401087:DAQ1742 RS15980
gene id: 1401087:DAQ1742_RS15980
uniprot id: A0A375AE52
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the gmhB family.
messages: Cytoplasm

1401087:DAQ1742 RS17485
gene id: 1401087:DAQ1742_RS17485
uniprot id: A0A375AFI3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DedA family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS03920
gene id: 1401087:DAQ1742_RS03920
uniprot id: A0A375A7D2
names: Similarity
messages: Belongs to the ner transcriptional regulatory family.

1401087:DAQ1742 RS00365
gene id: 1401087:DAQ1742_RS00365
uniprot id: A0A375A5B1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 5 family.
messages: Periplasm

1401087:DAQ1742 RS13670
gene id: 1401087:DAQ1742_RS13670
uniprot id: A0A375ACS5
names: Similarity
messages: Belongs to the asparagine synthetase family.

1401087:DAQ1742 RS20345
gene id: 1401087:DAQ1742_RS20345
uniprot id: A0A375AGM3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase delta chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.

1401087:DAQ1742 RS00490
gene id: 1401087:DAQ1742_RS00490
uniprot id: A0A375A5D1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Homodimer. Forms a membrane-associated complex with FtsX.
messages: Part of the ABC transporter FtsEX involved in cellular division. Important for assembly or stability of the septal ring.

1401087:DAQ1742 RS17185
gene id: 1401087:DAQ1742_RS17185
uniprot id: A0A375AEQ7
names: Similarity
messages: Belongs to the UPF0231 family.

1401087:DAQ1742 RS17835
gene id: 1401087:DAQ1742_RS17835
uniprot id: A0A375AF37
names: Function
names: Similarity
messages: Belongs to the MurCDEF family. Mpl subfamily.
messages: Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramate.

1401087:DAQ1742 RS13965
gene id: 1401087:DAQ1742_RS13965
uniprot id: A0A375AD26
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system.

1401087:DAQ1742 RS10065
gene id: 1401087:DAQ1742_RS10065
uniprot id: A0A375AAX0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrB/RnfD family.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

1401087:DAQ1742 RS08995
gene id: 1401087:DAQ1742_RS08995
uniprot id: A0A375AA21
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YejK family.
messages: nucleoid

1401087:DAQ1742 RS19210
gene id: 1401087:DAQ1742_RS19210
uniprot id: A0A375AGG2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 56 family.
messages: Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis.
messages: Cell inner membrane

1401087:DAQ1742 RS18850
gene id: 1401087:DAQ1742_RS18850
uniprot id: A0A375AFP9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Homotetramer.
messages: Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.

1401087:DAQ1742 RS18355
gene id: 1401087:DAQ1742_RS18355
uniprot id: A0A375AFQ2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

1401087:DAQ1742 RS01125
gene id: 1401087:DAQ1742_RS01125
uniprot id: A0A375A5K9
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the vitamin-B12 independent methionine synthase family.
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation.

1401087:DAQ1742 RS12585
gene id: 1401087:DAQ1742_RS12585
uniprot id: A0A375AC44
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein SsuA/TauA family.
messages: Periplasm

1401087:DAQ1742 RS13350
gene id: 1401087:DAQ1742_RS13350
uniprot id: A0A375AD13
names: Cofactor
names: Similarity
messages: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.

1401087:DAQ1742 RS18760
gene id: 1401087:DAQ1742_RS18760
uniprot id: A0A375AFS9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Cytoplasm
messages: Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
messages: Monomer.

1401087:DAQ1742 RS20315
gene id: 1401087:DAQ1742_RS20315
uniprot id: A0A375AHR3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.
messages: Cytoplasm
messages: Homotrimer.
messages: In the C-terminal section; belongs to the transferase hexapeptide repeat family.
messages: In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.

1401087:DAQ1742 RS00510
gene id: 1401087:DAQ1742_RS00510
uniprot id: A0A375A6G8
names: Similarity
messages: Belongs to the leucine-binding protein family.

1401087:DAQ1742 RS18285
gene id: 1401087:DAQ1742_RS18285
uniprot id: A0A375AFD0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

1401087:DAQ1742 RS07015
gene id: 1401087:DAQ1742_RS07015
uniprot id: A0A375A923
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the formate dehydrogenase gamma subunit family.
messages: Membrane

1401087:DAQ1742 RS01110
gene id: 1401087:DAQ1742_RS01110
uniprot id: A0A375A5Q6
names: Similarity
messages: Belongs to the transferase hexapeptide repeat family.

1401087:DAQ1742 RS08365
gene id: 1401087:DAQ1742_RS08365
uniprot id: A0A375A9Q8
names: Similarity
messages: Belongs to the MobA/MobL family.

1401087:DAQ1742 RS01345
gene id: 1401087:DAQ1742_RS01345
uniprot id: A0A375A5V5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

1401087:DAQ1742 RS13150
gene id: 1401087:DAQ1742_RS13150
uniprot id: A0A375ACF7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliJ family.
messages: Cell membrane
messages: Flagellar protein that affects chemotactic events.
messages: Membrane

1401087:DAQ1742 RS08350
gene id: 1401087:DAQ1742_RS08350
uniprot id: A0A375AB07
names: Caution
names: Similarity
messages: Belongs to the soluble Thoeris ThsA family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS18680
gene id: 1401087:DAQ1742_RS18680
uniprot id: A0A375AFK7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ribulose-phosphate 3-epimerase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.

1401087:DAQ1742 RS18040
gene id: 1401087:DAQ1742_RS18040
uniprot id: A0A375AGM9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
messages: Cell inner membrane
messages: Membrane
messages: Part of an enzyme complex containing four subunits: a flavoprotein (FrdA), an iron-sulfur protein (FrdB), and two hydrophobic anchor proteins (FrdC and FrdD).

1401087:DAQ1742 RS17310
gene id: 1401087:DAQ1742_RS17310
uniprot id: A0A375AFA8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.
messages: Cell membrane
messages: Self-interacts. Interacts with FtsZ.

1401087:DAQ1742 RS15800
gene id: 1401087:DAQ1742_RS15800
uniprot id: A0A375ADV3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS03940
gene id: 1401087:DAQ1742_RS03940
uniprot id: A0A375A795
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

1401087:DAQ1742 RS16950
gene id: 1401087:DAQ1742_RS16950
uniprot id: A0A375AFY1
names: Similarity
messages: Belongs to the UPF0047 family.

1401087:DAQ1742 RS00925
gene id: 1401087:DAQ1742_RS00925
uniprot id: A0A375A5G7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS03230
gene id: 1401087:DAQ1742_RS03230
uniprot id: A0A375A6Y4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. DeaD/CsdA subfamily.
messages: Cytoplasm
messages: DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.

1401087:DAQ1742 RS01660
gene id: 1401087:DAQ1742_RS01660
uniprot id: A0A375A607
names: Similarity
messages: Belongs to the MreC family.

1401087:DAQ1742 RS01070
gene id: 1401087:DAQ1742_RS01070
uniprot id: A0A375A5T0
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
messages: Binds 1 NADP(+) per subunit.
messages: Catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose.
messages: Contains a large N-terminal NADP-binding domain, and a smaller C-terminal substrate-binding domain.
messages: Homopentamer.

1401087:DAQ1742 RS05335
gene id: 1401087:DAQ1742_RS05335
uniprot id: A0A375A837
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DoxX family.
messages: Membrane

1401087:DAQ1742 RS14665
gene id: 1401087:DAQ1742_RS14665
uniprot id: A0A375ADS7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseB family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

1401087:DAQ1742 RS03240
gene id: 1401087:DAQ1742_RS03240
uniprot id: A0A375A713
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase U32 family. UbiV subfamily.
messages: Forms an heterodimer with UbiU.
messages: Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiU, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway.

1401087:DAQ1742 RS17620
gene id: 1401087:DAQ1742_RS17620
uniprot id: A0A375AFL7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons.

1401087:DAQ1742 RS19325
gene id: 1401087:DAQ1742_RS19325
uniprot id: A0A375AG06
names: Function
names: Similarity
names: Subunit
messages: Belongs to the serine/threonine dehydratase family.
messages: Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
messages: Homotetramer.

1401087:DAQ1742 RS13970
gene id: 1401087:DAQ1742_RS13970
uniprot id: A0A375ADE3
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS13535
gene id: 1401087:DAQ1742_RS13535
uniprot id: A0A375ACL4
names: Similarity
messages: Belongs to the FPG family.

1401087:DAQ1742 RS13375
gene id: 1401087:DAQ1742_RS13375
uniprot id: A0A375AD04
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

1401087:DAQ1742 RS15750
gene id: 1401087:DAQ1742_RS15750
uniprot id: A0A375AF85
names: Similarity
messages: Belongs to the acyl-CoA dehydrogenase family.

1401087:DAQ1742 RS09435
gene id: 1401087:DAQ1742_RS09435
uniprot id: A0A375AAL0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activation of pyruvate formate-lyase 1 under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
messages: Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
messages: Belongs to the organic radical-activating enzymes family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Cytoplasm

1401087:DAQ1742 RS12980
gene id: 1401087:DAQ1742_RS12980
uniprot id: A0A375ADQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MatP family.
messages: Cytoplasm
messages: Homodimer.
messages: Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.

1401087:DAQ1742 RS19220
gene id: 1401087:DAQ1742_RS19220
uniprot id: A0A375AFX3
names: Function
names: Similarity
messages: Belongs to the DegT/DnrJ/EryC1 family.
messages: Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D-galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D-Glc4O) and L-glutamate.

1401087:DAQ1742 RS15045
gene id: 1401087:DAQ1742_RS15045
uniprot id: A0A375ADQ7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNase HII family.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
messages: Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding.

1401087:DAQ1742 RS01845
gene id: 1401087:DAQ1742_RS01845
uniprot id: A0A375A681
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZapG family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS11235
gene id: 1401087:DAQ1742_RS11235
uniprot id: A0A375ABQ1
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

1401087:DAQ1742 RS12415
gene id: 1401087:DAQ1742_RS12415
uniprot id: A0A375AC19
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS03480
gene id: 1401087:DAQ1742_RS03480
uniprot id: A0A375A791
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Membrane

1401087:DAQ1742 RS05670
gene id: 1401087:DAQ1742_RS05670
uniprot id: A0A375A889
names: Similarity
messages: Belongs to the GSP C family.

1401087:DAQ1742 RS15730
gene id: 1401087:DAQ1742_RS15730
uniprot id: A0A375ADZ6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-Y family.
messages: Binds 2 magnesium ions per subunit.
messages: Cytoplasm
messages: Monomer.
messages: Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.

1401087:DAQ1742 RS19495
gene id: 1401087:DAQ1742_RS19495
uniprot id: A0A375AG25
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MenA family. Type 1 subfamily.
messages: Cell membrane
messages: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK).
messages: Membrane

1401087:DAQ1742 RS04730
gene id: 1401087:DAQ1742_RS04730
uniprot id: A0A375A7R3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS00030
gene id: 1401087:DAQ1742_RS00030
uniprot id: A0A375A513
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RbsD / FucU family. RbsD subfamily.
messages: Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
messages: Cytoplasm
messages: Homodecamer.

1401087:DAQ1742 RS16260
gene id: 1401087:DAQ1742_RS16260
uniprot id: A0A375AEA6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DHNA family.
messages: Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin.
messages: Homooctamer.

1401087:DAQ1742 RS06225
gene id: 1401087:DAQ1742_RS06225
uniprot id: A0A375A8B7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 6 family.
messages: Cell membrane
messages: Composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1401087:DAQ1742 RS01165
gene id: 1401087:DAQ1742_RS01165
uniprot id: A0A375A621
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
messages: Cytoplasm
messages: In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.

1401087:DAQ1742 RS19845
gene id: 1401087:DAQ1742_RS19845
uniprot id: A0A375AGA4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.
messages: Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS10295
gene id: 1401087:DAQ1742_RS10295
uniprot id: A0A375AAT0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0126 family.
messages: Membrane

1401087:DAQ1742 RS07445
gene id: 1401087:DAQ1742_RS07445
uniprot id: A0A375A8Z2
names: Similarity
messages: Belongs to the bacterial solute-binding protein 1 family.

1401087:DAQ1742 RS18015
gene id: 1401087:DAQ1742_RS18015
uniprot id: A0A375AF89
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-to-5' exoribonuclease specific for small oligoribonucleotides.
messages: Belongs to the oligoribonuclease family.
messages: Cytoplasm

1401087:DAQ1742 RS13635
gene id: 1401087:DAQ1742_RS13635
uniprot id: A0A375ACP2
names: Function
names: Similarity
messages: Belongs to the flavodoxin family.
messages: Low-potential electron donor to a number of redox enzymes.

1401087:DAQ1742 RS05750
gene id: 1401087:DAQ1742_RS05750
uniprot id: A0A375A8F5
names: Cofactor
messages: Binds 1 phosphopantetheine covalently.

1401087:DAQ1742 RS13455
gene id: 1401087:DAQ1742_RS13455
uniprot id: A0A375AD31
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ExbD/TolR family.
messages: Cell inner membrane
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolQ, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

1401087:DAQ1742 RS07060
gene id: 1401087:DAQ1742_RS07060
uniprot id: A0A375A9C0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

1401087:DAQ1742 RS14630
gene id: 1401087:DAQ1742_RS14630
uniprot id: A0A375AD63
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c oxidase bacterial subunit 4 family.
messages: Cytochrome bo(3) ubiquinol terminal oxidase is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration. Has proton pump activity across the membrane in addition to electron transfer, pumping 2 protons/electron.
messages: Heterooctamer of two A chains, two B chains, two C chains and two D chains.
messages: Membrane

1401087:DAQ1742 RS14700
gene id: 1401087:DAQ1742_RS14700
uniprot id: A0A375AD73
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the NrdR family.
messages: Binds 1 zinc ion.
messages: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.

1401087:DAQ1742 RS08250
gene id: 1401087:DAQ1742_RS08250
uniprot id: A0A375AA05
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS04815
gene id: 1401087:DAQ1742_RS04815
uniprot id: A0A375A7T8
names: Function
names: Similarity
messages: Belongs to the RecO family.
messages: Involved in DNA repair and RecF pathway recombination.

1401087:DAQ1742 RS12840
gene id: 1401087:DAQ1742_RS12840
uniprot id: A0A375ADL5
names: Similarity
names: Subunit
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.

1401087:DAQ1742 RS17360
gene id: 1401087:DAQ1742_RS17360
uniprot id: A0A375AEZ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transpeptidase family. FtsI subfamily.
messages: Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
messages: Cell inner membrane

1401087:DAQ1742 RS16330
gene id: 1401087:DAQ1742_RS16330
uniprot id: A0A375AET8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inositol monophosphatase superfamily. CysQ family.
messages: Cell inner membrane
messages: Converts adenosine-3',5'-bisphosphate (PAP) to AMP.

1401087:DAQ1742 RS17370
gene id: 1401087:DAQ1742_RS17370
uniprot id: A0A375AF35
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmH family.
messages: Cytoplasm
messages: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.

1401087:DAQ1742 RS03120
gene id: 1401087:DAQ1742_RS03120
uniprot id: A0A375A772
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

1401087:DAQ1742 RS09590
gene id: 1401087:DAQ1742_RS09590
uniprot id: A0A375AAE7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS12160
gene id: 1401087:DAQ1742_RS12160
uniprot id: A0A375AC82
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the peroxiredoxin family. Tpx subfamily.
messages: Homodimer.
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this atypical 2-Cys peroxiredoxin, C(R) is present in the same subunit to form an intramolecular disulfide. The disulfide is subsequently reduced by thioredoxin.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

1401087:DAQ1742 RS02730
gene id: 1401087:DAQ1742_RS02730
uniprot id: A0A375A6Z0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

1401087:DAQ1742 RS20150
gene id: 1401087:DAQ1742_RS20150
uniprot id: A0A375AGP3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
messages: Binds 1 potassium ion per subunit.
messages: Cytoplasm
messages: Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.

1401087:DAQ1742 RS06520
gene id: 1401087:DAQ1742_RS06520
uniprot id: A0A375A8H2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MotA family.
messages: Membrane

1401087:DAQ1742 RS19945
gene id: 1401087:DAQ1742_RS19945
uniprot id: A0A375AGC2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS03340
gene id: 1401087:DAQ1742_RS03340
uniprot id: A0A375A6W4
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS19310
gene id: 1401087:DAQ1742_RS19310
uniprot id: A0A375AG92
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS06070
gene id: 1401087:DAQ1742_RS06070
uniprot id: A0A375A8H5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).
messages: Belongs to the AccD/PCCB family.
messages: Binds 1 zinc ion per subunit.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
messages: Cytoplasm

1401087:DAQ1742 RS05355
gene id: 1401087:DAQ1742_RS05355
uniprot id: A0A375A800
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS09665
gene id: 1401087:DAQ1742_RS09665
uniprot id: A0A375AA87
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SMC family. MukB subfamily.
messages: Homodimerization via its hinge domain. Binds to DNA via its C-terminal region. Interacts, and probably forms a ternary complex, with MukE and MukF via its C-terminal region. The complex formation is stimulated by calcium or magnesium. Interacts with tubulin-related protein FtsZ.
messages: Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division.
messages: The hinge domain, which separates the large intramolecular coiled coil regions, allows the homodimerization, forming a V-shaped homodimer.
messages: nucleoid

1401087:DAQ1742 RS15770
gene id: 1401087:DAQ1742_RS15770
uniprot id: A0A375ADU4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.
messages: Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
messages: Binds 1 Mg(2+) ion per subunit.
messages: Monomer.

1401087:DAQ1742 RS12640
gene id: 1401087:DAQ1742_RS12640
uniprot id: A0A375ACJ6
names: Similarity
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.

1401087:DAQ1742 RS07905
gene id: 1401087:DAQ1742_RS07905
uniprot id: A0A375A9J2
names: Cofactor
names: Similarity
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily.
messages: Binds 1 Mg(2+) ion per subunit.

1401087:DAQ1742 RS03110
gene id: 1401087:DAQ1742_RS03110
uniprot id: A0A375A6T2
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

1401087:DAQ1742 RS04220
gene id: 1401087:DAQ1742_RS04220
uniprot id: A0A375A7G4
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS15990
gene id: 1401087:DAQ1742_RS15990
uniprot id: A0A375AE86
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS12250
gene id: 1401087:DAQ1742_RS12250
uniprot id: A0A375ABY9
names: Function
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.
messages: Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP). Involved in the elongation cycle of fatty acid which are used in the lipid metabolism and in the biotin biosynthesis.

1401087:DAQ1742 RS13540
gene id: 1401087:DAQ1742_RS13540
uniprot id: A0A375ACM3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LamB/PxpA family.
messages: Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
messages: Forms a complex composed of PxpA, PxpB and PxpC.

1401087:DAQ1742 RS12665
gene id: 1401087:DAQ1742_RS12665
uniprot id: A0A375ACI8
names: Function
names: Similarity
messages: Belongs to the SELO family.
messages: Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).

1401087:DAQ1742 RS04755
gene id: 1401087:DAQ1742_RS04755
uniprot id: A0A375A7I1
names: Function
messages: Acts as a radical domain for damaged PFL and possibly other radical proteins.

1401087:DAQ1742 RS03365
gene id: 1401087:DAQ1742_RS03365
uniprot id: A0A375A852
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

1401087:DAQ1742 RS17760
gene id: 1401087:DAQ1742_RS17760
uniprot id: A0A375AFQ5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Cell inner membrane
messages: Homoheptamer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.
messages: Membrane

1401087:DAQ1742 RS15080
gene id: 1401087:DAQ1742_RS15080
uniprot id: A0A375ADF7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50B family.
messages: Membrane

1401087:DAQ1742 RS11715
gene id: 1401087:DAQ1742_RS11715
uniprot id: A0A375ABL6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS07210
gene id: 1401087:DAQ1742_RS07210
uniprot id: A0A375A942
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS06185
gene id: 1401087:DAQ1742_RS06185
uniprot id: A0A375A8E7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1401087:DAQ1742 RS15025
gene id: 1401087:DAQ1742_RS15025
uniprot id: A0A375ADF2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tRNA(Ile)-lysidine synthase family.
messages: Cytoplasm
messages: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
messages: The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding.

1401087:DAQ1742 RS16525
gene id: 1401087:DAQ1742_RS16525
uniprot id: A0A375AEB7
names: Cofactor
messages: Binds 1 Mg(2+) ion per trimer.

1401087:DAQ1742 RS07100
gene id: 1401087:DAQ1742_RS07100
uniprot id: A0A375A8X0
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

1401087:DAQ1742 RS15685
gene id: 1401087:DAQ1742_RS15685
uniprot id: A0A375AEB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the gamma-glutamyl phosphate reductase family.
messages: Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
messages: Cytoplasm

1401087:DAQ1742 RS14170
gene id: 1401087:DAQ1742_RS14170
uniprot id: A0A375ADJ0
names: Function
names: Similarity
messages: Belongs to the RecR family.
messages: May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.

1401087:DAQ1742 RS17950
gene id: 1401087:DAQ1742_RS17950
uniprot id: A0A375AGK8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS00375
gene id: 1401087:DAQ1742_RS00375
uniprot id: A0A375A590
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS06490
gene id: 1401087:DAQ1742_RS06490
uniprot id: A0A375A908
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the cytochrome b562 family.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per molecule.
messages: Electron-transport protein of unknown function.

1401087:DAQ1742 RS15760
gene id: 1401087:DAQ1742_RS15760
uniprot id: A0A375AEF4
names: Function
names: Similarity
messages: Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.
messages: Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).

1401087:DAQ1742 RS20000
gene id: 1401087:DAQ1742_RS20000
uniprot id: A0A375AGG8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS03840
gene id: 1401087:DAQ1742_RS03840
uniprot id: A0A375A794
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BamE family.
messages: Cell outer membrane
messages: Part of the Bam complex, which is composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE.
messages: Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.

1401087:DAQ1742 RS19335
gene id: 1401087:DAQ1742_RS19335
uniprot id: A0A375AG04
names: Function
names: Similarity
messages: Acts on leucine, isoleucine and valine.
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS06600
gene id: 1401087:DAQ1742_RS06600
uniprot id: A0A375A8U6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

1401087:DAQ1742 RS12200
gene id: 1401087:DAQ1742_RS12200
uniprot id: A0A375ABX7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS09805
gene id: 1401087:DAQ1742_RS09805
uniprot id: A0A375AAC6
names: Similarity
messages: Belongs to the CFA/CMAS family.

1401087:DAQ1742 RS12965
gene id: 1401087:DAQ1742_RS12965
uniprot id: A0A375ACB5
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS13215
gene id: 1401087:DAQ1742_RS13215
uniprot id: A0A375ACI9
names: Similarity
messages: Belongs to the Dps family.

1401087:DAQ1742 RS10175
gene id: 1401087:DAQ1742_RS10175
uniprot id: A0A375AAS2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0259 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS00735
gene id: 1401087:DAQ1742_RS00735
uniprot id: A0A375A5E2
names: Similarity
messages: Belongs to the agmatine deiminase family.

1401087:DAQ1742 RS13165
gene id: 1401087:DAQ1742_RS13165
uniprot id: A0A375ACW7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliM family.
messages: Cell inner membrane
messages: FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

1401087:DAQ1742 RS17790
gene id: 1401087:DAQ1742_RS17790
uniprot id: A0A375AFD7
names: Function
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
messages: Catalyzes the biosynthesis of agmatine from arginine.

1401087:DAQ1742 RS02020
gene id: 1401087:DAQ1742_RS02020
uniprot id: A0A375A673
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DedA family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS17365
gene id: 1401087:DAQ1742_RS17365
uniprot id: A0A375AFB8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsL family.
messages: Cell inner membrane
messages: Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
messages: Membrane
messages: Part of a complex composed of FtsB, FtsL and FtsQ.

1401087:DAQ1742 RS04100
gene id: 1401087:DAQ1742_RS04100
uniprot id: A0A375A7H5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
messages: Cell inner membrane
messages: Involved in the import of queuosine (Q) precursors, required for Q precursor salvage.

1401087:DAQ1742 RS03535
gene id: 1401087:DAQ1742_RS03535
uniprot id: A0A375A6U9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Cell inner membrane
messages: Membrane
messages: Transports acetate.

1401087:DAQ1742 RS11100
gene id: 1401087:DAQ1742_RS11100
uniprot id: A0A375ABA1
names: Similarity
messages: Belongs to the UPF0181 family.

1401087:DAQ1742 RS06215
gene id: 1401087:DAQ1742_RS06215
uniprot id: A0A375A8J7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

1401087:DAQ1742 RS11760
gene id: 1401087:DAQ1742_RS11760
uniprot id: A0A375ABJ2
names: Similarity
messages: Belongs to the peptidase S1B family.

1401087:DAQ1742 RS03470
gene id: 1401087:DAQ1742_RS03470
uniprot id: A0A375A872
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
messages: Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.
messages: Homodimer.

1401087:DAQ1742 RS14175
gene id: 1401087:DAQ1742_RS14175
uniprot id: A0A375AD87
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the YbaB/EbfC family.
messages: Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
messages: Homodimer.
messages: nucleoid

1401087:DAQ1742 RS20140
gene id: 1401087:DAQ1742_RS20140
uniprot id: A0A375AGJ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0161 family.
messages: Cell membrane
messages: Could be involved in insertion of integral membrane proteins into the membrane.

1401087:DAQ1742 RS17850
gene id: 1401087:DAQ1742_RS17850
uniprot id: A0A375AFS2
names: Function
names: Similarity
messages: Belongs to the band 7/mec-2 family. HflC subfamily.
messages: HflC and HflK could regulate a protease.

1401087:DAQ1742 RS04850
gene id: 1401087:DAQ1742_RS04850
uniprot id: A0A375A7V6
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS11180
gene id: 1401087:DAQ1742_RS11180
uniprot id: A0A375ABF1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS15460
gene id: 1401087:DAQ1742_RS15460
uniprot id: A0A375ADP3
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS15265
gene id: 1401087:DAQ1742_RS15265
uniprot id: A0A375ADK4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Lgt family.
messages: Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
messages: Cell membrane

1401087:DAQ1742 RS18840
gene id: 1401087:DAQ1742_RS18840
uniprot id: A0A375AFP2
names: Function
names: Similarity
messages: Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.
messages: Belongs to the glycogen phosphorylase family.

1401087:DAQ1742 RS15175
gene id: 1401087:DAQ1742_RS15175
uniprot id: A0A375ADH5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0382 family.
messages: Membrane

1401087:DAQ1742 RS12590
gene id: 1401087:DAQ1742_RS12590
uniprot id: A0A375ABZ6
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the SsuD family.
messages: Catalyzes the desulfonation of aliphatic sulfonates.
messages: FMNH(2) which is absolutely required for this enzymatic reaction, is provided by SsuE.
messages: Homotetramer.

1401087:DAQ1742 RS07115
gene id: 1401087:DAQ1742_RS07115
uniprot id: A0A375A943
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS00970
gene id: 1401087:DAQ1742_RS00970
uniprot id: A0A375A5R2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the nucleoid occlusion factor SlmA family.
messages: Homodimer. Interacts with FtsZ.
messages: Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.
messages: nucleoid

1401087:DAQ1742 RS20225
gene id: 1401087:DAQ1742_RS20225
uniprot id: A0A375AGH9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family.
messages: Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
messages: Cell membrane

1401087:DAQ1742 RS19825
gene id: 1401087:DAQ1742_RS19825
uniprot id: A0A375AGB5
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

1401087:DAQ1742 RS04615
gene id: 1401087:DAQ1742_RS04615
uniprot id: A0A375A7R5
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon.

1401087:DAQ1742 RS11265
gene id: 1401087:DAQ1742_RS11265
uniprot id: A0A375ABN7
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS09515
gene id: 1401087:DAQ1742_RS09515
uniprot id: A0A375AAK5
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
messages: Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
messages: Cytoplasm
messages: Equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates. Interconversion between the various forms is largely reversible and is influenced by the natural substrates and inhibitors of the enzyme.
messages: Feedback inhibited by histidine.

1401087:DAQ1742 RS03130
gene id: 1401087:DAQ1742_RS03130
uniprot id: A0A375A6Q6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS09215
gene id: 1401087:DAQ1742_RS09215
uniprot id: A0A375AAE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS05425
gene id: 1401087:DAQ1742_RS05425
uniprot id: A0A375A7V4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS04945
gene id: 1401087:DAQ1742_RS04945
uniprot id: A0A375A7V8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily.
messages: Cell membrane
messages: Efflux system for nickel and cobalt.
messages: Membrane

1401087:DAQ1742 RS11695
gene id: 1401087:DAQ1742_RS11695
uniprot id: A0A375ABN0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS12465
gene id: 1401087:DAQ1742_RS12465
uniprot id: A0A375AC33
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

1401087:DAQ1742 RS07930
gene id: 1401087:DAQ1742_RS07930
uniprot id: A0A375A9H3
names: Function
names: Similarity
messages: Belongs to the EfeM/EfeO family.
messages: Involved in Fe(2+) uptake. Could be an iron-binding and/or electron-transfer component.

1401087:DAQ1742 RS13190
gene id: 1401087:DAQ1742_RS13190
uniprot id: A0A375ACW6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliR/MopE/SpaR family.
messages: Cell membrane
messages: Membrane
messages: Role in flagellar biosynthesis.

1401087:DAQ1742 RS09530
gene id: 1401087:DAQ1742_RS09530
uniprot id: A0A375ABQ3
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS10185
gene id: 1401087:DAQ1742_RS10185
uniprot id: A0A375AAK7
names: Similarity
messages: Belongs to the acyl coenzyme A hydrolase family.

1401087:DAQ1742 RS05205
gene id: 1401087:DAQ1742_RS05205
uniprot id: A0A375A8C4
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS14125
gene id: 1401087:DAQ1742_RS14125
uniprot id: A0A375ADH8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

1401087:DAQ1742 RS17855
gene id: 1401087:DAQ1742_RS17855
uniprot id: A0A375AF64
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the band 7/mec-2 family. HflK subfamily.
messages: HflC and HflK could encode or regulate a protease.
messages: HflC and HflK may interact to form a multimeric complex.
messages: Membrane

1401087:DAQ1742 RS17615
gene id: 1401087:DAQ1742_RS17615
uniprot id: A0A375AF07
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS12270
gene id: 1401087:DAQ1742_RS12270
uniprot id: A0A375ABT4
names: Similarity
messages: Belongs to the aldolase class II family. AraD/FucA subfamily.

1401087:DAQ1742 RS13555
gene id: 1401087:DAQ1742_RS13555
uniprot id: A0A375AD53
names: Similarity
messages: Belongs to the GTP cyclohydrolase I type 2/NIF3 family.

1401087:DAQ1742 RS04540
gene id: 1401087:DAQ1742_RS04540
uniprot id: A0A375A7E2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the spermidine/spermine synthase family.
messages: Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
messages: Homodimer or homotetramer.

1401087:DAQ1742 RS00975
gene id: 1401087:DAQ1742_RS00975
uniprot id: A0A375A5I0
names: Caution
names: Function
names: Similarity
messages: Belongs to the dUTPase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.

1401087:DAQ1742 RS20100
gene id: 1401087:DAQ1742_RS20100
uniprot id: A0A375AGZ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmJ family.
messages: Cytoplasm
messages: Specifically methylates the guanosine in position 1516 of 16S rRNA.

1401087:DAQ1742 RS12885
gene id: 1401087:DAQ1742_RS12885
uniprot id: A0A375AC72
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Maf family. YceF subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleoside triphosphate pyrophosphatase that hydrolyzes 7-methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.

1401087:DAQ1742 RS09235
gene id: 1401087:DAQ1742_RS09235
uniprot id: A0A375AAH5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAE transporter (TC 2.A.81) family. YbjL subfamily.
messages: Cell membrane

1401087:DAQ1742 RS15085
gene id: 1401087:DAQ1742_RS15085
uniprot id: A0A375ADL0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDS family.
messages: Membrane

1401087:DAQ1742 RS10910
gene id: 1401087:DAQ1742_RS10910
uniprot id: A0A375ABG2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliP/MopC/SpaP family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS05465
gene id: 1401087:DAQ1742_RS05465
uniprot id: A0A375A849
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS12635
gene id: 1401087:DAQ1742_RS12635
uniprot id: A0A375AC91
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Gram-negative porin family.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS06900
gene id: 1401087:DAQ1742_RS06900
uniprot id: A0A375A8T0
names: Similarity
messages: Belongs to the IucA/IucC family.

1401087:DAQ1742 RS18205
gene id: 1401087:DAQ1742_RS18205
uniprot id: A0A375AGR4
names: Function
names: Similarity
messages: Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.
messages: Belongs to the Fmt family.

1401087:DAQ1742 RS09745
gene id: 1401087:DAQ1742_RS09745
uniprot id: A0A375AAB3
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the glutamyl-tRNA reductase family.
messages: Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
messages: During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.
messages: Homodimer.
messages: Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization.

1401087:DAQ1742 RS02550
gene id: 1401087:DAQ1742_RS02550
uniprot id: A0A375A6C7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
messages: Belongs to the ZapA family. Type 1 subfamily.
messages: Cytoplasm
messages: Homodimer. Interacts with FtsZ.

1401087:DAQ1742 RS05000
gene id: 1401087:DAQ1742_RS05000
uniprot id: A0A375A888
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HscB family.
messages: Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA.
messages: Interacts with HscA and stimulates its ATPase activity. Interacts with IscU.

1401087:DAQ1742 RS18535
gene id: 1401087:DAQ1742_RS18535
uniprot id: A0A375AFP1
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS00725
gene id: 1401087:DAQ1742_RS00725
uniprot id: A0A375A5F3
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by ADP and other diphosphonucleosides, and allosterically inhibited by phosphoenolpyruvate.
messages: Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Prokaryotic clade 'B1' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS09390
gene id: 1401087:DAQ1742_RS09390
uniprot id: A0A375AA42
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FtsK/SpoIIIE/SftA family.
messages: Membrane

1401087:DAQ1742 RS11145
gene id: 1401087:DAQ1742_RS11145
uniprot id: A0A375AB48
names: Similarity
messages: Belongs to the fructosamine kinase family.

1401087:DAQ1742 RS12710
gene id: 1401087:DAQ1742_RS12710
uniprot id: A0A375ACJ8
names: Function
names: Similarity
messages: Belongs to the ROK (NagC/XylR) family. NagK subfamily.
messages: Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.

1401087:DAQ1742 RS04375
gene id: 1401087:DAQ1742_RS04375
uniprot id: A0A375A7M4
names: Similarity
messages: Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.

1401087:DAQ1742 RS13140
gene id: 1401087:DAQ1742_RS13140
uniprot id: A0A375ACU6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliH family.
messages: Cytoplasm
messages: Needed for flagellar regrowth and assembly.

1401087:DAQ1742 RS02610
gene id: 1401087:DAQ1742_RS02610
uniprot id: A0A375A7Q1
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS13495
gene id: 1401087:DAQ1742_RS13495
uniprot id: A0A375ACJ2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the succinate/malate CoA ligase beta subunit family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterotetramer of two alpha and two beta subunits.
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.

1401087:DAQ1742 RS10420
gene id: 1401087:DAQ1742_RS10420
uniprot id: A0A375AC77
names: Similarity
names: Subunit
messages: Belongs to the KHG/KDPG aldolase family.
messages: Homotrimer.

1401087:DAQ1742 RS09255
gene id: 1401087:DAQ1742_RS09255
uniprot id: A0A375AA95
names: Cofactor
names: Similarity
messages: Belongs to the RimK family.
messages: Binds 2 magnesium or manganese ions per subunit.

1401087:DAQ1742 RS06235
gene id: 1401087:DAQ1742_RS06235
uniprot id: A0A375A8G0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS17250
gene id: 1401087:DAQ1742_RS17250
uniprot id: A0A375AEQ8
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS18500
gene id: 1401087:DAQ1742_RS18500
uniprot id: A0A375AFG8
names: Similarity
messages: Belongs to the UPF0270 family.

1401087:DAQ1742 RS01395
gene id: 1401087:DAQ1742_RS01395
uniprot id: A0A375A5S1
names: Similarity
messages: In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS11775
gene id: 1401087:DAQ1742_RS11775
uniprot id: A0A375ABS8
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS10870
gene id: 1401087:DAQ1742_RS10870
uniprot id: A0A375AB36
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

1401087:DAQ1742 RS00450
gene id: 1401087:DAQ1742_RS00450
uniprot id: A0A375A5H4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. YhhS family.
messages: Cell inner membrane

1401087:DAQ1742 RS12880
gene id: 1401087:DAQ1742_RS12880
uniprot id: A0A375ACH7
names: Function
names: Similarity
messages: Belongs to the DUF177 domain family.
messages: Plays a role in synthesis, processing and/or stability of 23S rRNA.

1401087:DAQ1742 RS05675
gene id: 1401087:DAQ1742_RS05675
uniprot id: A0A375A8L0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial secretin family. GSP D subfamily.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS04625
gene id: 1401087:DAQ1742_RS04625
uniprot id: A0A375A8T4
names: Similarity
messages: Belongs to the SfsA family.

1401087:DAQ1742 RS03150
gene id: 1401087:DAQ1742_RS03150
uniprot id: A0A375A6N7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.
messages: Cytoplasm
messages: Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.

1401087:DAQ1742 RS16450
gene id: 1401087:DAQ1742_RS16450
uniprot id: A0A375AEA0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pyrroline-5-carboxylate reductase family.
messages: Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
messages: Cytoplasm

1401087:DAQ1742 RS12975
gene id: 1401087:DAQ1742_RS12975
uniprot id: A0A375ACJ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GhoT/OrtT toxin family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS10265
gene id: 1401087:DAQ1742_RS10265
uniprot id: A0A375AAN0
names: Similarity
messages: Belongs to the UDPGP type 2 family.

1401087:DAQ1742 RS17830
gene id: 1401087:DAQ1742_RS17830
uniprot id: A0A375AFE9
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FBPase class 1 family.
messages: Binds 2 magnesium ions per subunit.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS01075
gene id: 1401087:DAQ1742_RS01075
uniprot id: A0A375A5J7
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
messages: Homodimer.

1401087:DAQ1742 RS12785
gene id: 1401087:DAQ1742_RS12785
uniprot id: A0A375AC45
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
messages: Cytoplasm
messages: Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides.

1401087:DAQ1742 RS10245
gene id: 1401087:DAQ1742_RS10245
uniprot id: A0A375AAL2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0056 (MarC) family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS00425
gene id: 1401087:DAQ1742_RS00425
uniprot id: A0A375A597
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane.

1401087:DAQ1742 RS05550
gene id: 1401087:DAQ1742_RS05550
uniprot id: A0A375A8B6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HsdR family.
messages: Subunit R is required for both nuclease and ATPase activities, but not for modification.
messages: The type I restriction/modification system is composed of three polypeptides R, M and S.

1401087:DAQ1742 RS18860
gene id: 1401087:DAQ1742_RS18860
uniprot id: A0A375AG88
names: Function
names: Similarity
names: Subunit
messages: Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
messages: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
messages: Monomer.

1401087:DAQ1742 RS09695
gene id: 1401087:DAQ1742_RS09695
uniprot id: A0A375AAG8
names: Similarity
messages: Belongs to the RNase T2 family.

1401087:DAQ1742 RS03160
gene id: 1401087:DAQ1742_RS03160
uniprot id: A0A375A6U0
names: Function
names: Similarity
messages: Belongs to the DHPS family.
messages: Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives.

1401087:DAQ1742 RS06125
gene id: 1401087:DAQ1742_RS06125
uniprot id: A0A375A8Q4
names: Similarity
messages: Belongs to the GST superfamily.

1401087:DAQ1742 RS05805
gene id: 1401087:DAQ1742_RS05805
uniprot id: A0A375A8C8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

1401087:DAQ1742 RS14040
gene id: 1401087:DAQ1742_RS14040
uniprot id: A0A375ACY9
names: Function
names: Similarity
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily.
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily.
messages: Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 2-succinylbenzoate (OSB).

1401087:DAQ1742 RS14140
gene id: 1401087:DAQ1742_RS14140
uniprot id: A0A375AED5
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS02155
gene id: 1401087:DAQ1742_RS02155
uniprot id: A0A375A655
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS20115
gene id: 1401087:DAQ1742_RS20115
uniprot id: A0A375AHM3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecF family.
messages: Cytoplasm
messages: The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.

1401087:DAQ1742 RS07055
gene id: 1401087:DAQ1742_RS07055
uniprot id: A0A375A920
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

1401087:DAQ1742 RS10515
gene id: 1401087:DAQ1742_RS10515
uniprot id: A0A375AAS6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cx-SAM synthase family.
messages: Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
messages: Homodimer.

1401087:DAQ1742 RS14595
gene id: 1401087:DAQ1742_RS14595
uniprot id: A0A375ADG4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family. Tig subfamily.
messages: Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.
messages: Cytoplasm
messages: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase.

1401087:DAQ1742 RS11230
gene id: 1401087:DAQ1742_RS11230
uniprot id: A0A375ABG1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

1401087:DAQ1742 RS19725
gene id: 1401087:DAQ1742_RS19725
uniprot id: A0A375AGA0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the argininosuccinate synthase family. Type 2 subfamily.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS19305
gene id: 1401087:DAQ1742_RS19305
uniprot id: A0A375AGI4
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ketol-acid reductoisomerase family.
messages: Binds 2 magnesium ions per subunit.
messages: Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS00660
gene id: 1401087:DAQ1742_RS00660
uniprot id: A0A375A6K1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CpxP/Spy family.
messages: Periplasm

1401087:DAQ1742 RS17895
gene id: 1401087:DAQ1742_RS17895
uniprot id: A0A375AF69
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the QueG family.
messages: Binds 2 [4Fe-4S] clusters per monomer.
messages: Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

1401087:DAQ1742 RS09030
gene id: 1401087:DAQ1742_RS09030
uniprot id: A0A375AA39
names: Similarity
messages: Belongs to the pseudouridine synthase RsuA family.

1401087:DAQ1742 RS02855
gene id: 1401087:DAQ1742_RS02855
uniprot id: A0A375A6V2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
messages: Membrane

1401087:DAQ1742 RS11120
gene id: 1401087:DAQ1742_RS11120
uniprot id: A0A375AB43
names: Similarity
messages: Belongs to the UPF0053 family.

1401087:DAQ1742 RS00710
gene id: 1401087:DAQ1742_RS00710
uniprot id: A0A375A6K8
names: Similarity
messages: Belongs to the Nudix hydrolase family.

1401087:DAQ1742 RS13500
gene id: 1401087:DAQ1742_RS13500
uniprot id: A0A375ACT0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).

1401087:DAQ1742 RS13510
gene id: 1401087:DAQ1742_RS13510
uniprot id: A0A375ACW2
names: Cofactor
names: Similarity
messages: Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Binds 1 [3Fe-4S] cluster.
messages: Binds 1 [4Fe-4S] cluster.

1401087:DAQ1742 RS04390
gene id: 1401087:DAQ1742_RS04390
uniprot id: A0A375A7L9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule.

1401087:DAQ1742 RS19735
gene id: 1401087:DAQ1742_RS19735
uniprot id: A0A375AGF9
names: Similarity
messages: Belongs to the FrmR/RcnR family.

1401087:DAQ1742 RS07010
gene id: 1401087:DAQ1742_RS07010
uniprot id: A0A375A9A9
names: Cofactor
names: Function
messages: Binds 4 [4Fe-4S] clusters per subunit.
messages: The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.

1401087:DAQ1742 RS05060
gene id: 1401087:DAQ1742_RS05060
uniprot id: A0A375A7N9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS01525
gene id: 1401087:DAQ1742_RS01525
uniprot id: A0A375A5X4
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS15325
gene id: 1401087:DAQ1742_RS15325
uniprot id: A0A375ADM2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS03085
gene id: 1401087:DAQ1742_RS03085
uniprot id: A0A375A801
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ArgR family.
messages: Cytoplasm
messages: Regulates arginine biosynthesis genes.

1401087:DAQ1742 RS13825
gene id: 1401087:DAQ1742_RS13825
uniprot id: A0A375ADA8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the radical SAM superfamily. Lipoyl synthase family.
messages: Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
messages: Cytoplasm

1401087:DAQ1742 RS10195
gene id: 1401087:DAQ1742_RS10195
uniprot id: A0A375AAK2
names: Similarity
messages: Belongs to the YciI family.

1401087:DAQ1742 RS18465
gene id: 1401087:DAQ1742_RS18465
uniprot id: A0A375AG42
names: Similarity
messages: Belongs to the FKBP-type PPIase family.

1401087:DAQ1742 RS16370
gene id: 1401087:DAQ1742_RS16370
uniprot id: A0A375AE78
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein bS6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein bS6.

1401087:DAQ1742 RS18740
gene id: 1401087:DAQ1742_RS18740
uniprot id: A0A375AGA9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the IgaA family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS09465
gene id: 1401087:DAQ1742_RS09465
uniprot id: A0A375AAJ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytidylate kinase family. Type 1 subfamily.
messages: Cytoplasm

1401087:DAQ1742 RS13720
gene id: 1401087:DAQ1742_RS13720
uniprot id: A0A375ACN3
names: Similarity
messages: Belongs to the PhoH family.

1401087:DAQ1742 RS16355
gene id: 1401087:DAQ1742_RS16355
uniprot id: A0A375AEH5
names: Similarity
messages: Belongs to the FKBP-type PPIase family.

1401087:DAQ1742 RS19860
gene id: 1401087:DAQ1742_RS19860
uniprot id: A0A375AGA2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
messages: Cell membrane
messages: Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.

1401087:DAQ1742 RS03825
gene id: 1401087:DAQ1742_RS03825
uniprot id: A0A375A7A9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SmpB family.
messages: Cytoplasm
messages: Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.

1401087:DAQ1742 RS01355
gene id: 1401087:DAQ1742_RS01355
uniprot id: A0A375A5U9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

1401087:DAQ1742 RS19060
gene id: 1401087:DAQ1742_RS19060
uniprot id: A0A375AGD0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the diaminopimelate epimerase family.
messages: Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS09360
gene id: 1401087:DAQ1742_RS09360
uniprot id: A0A375AAN9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

1401087:DAQ1742 RS18880
gene id: 1401087:DAQ1742_RS18880
uniprot id: A0A375AFR8
names: Similarity
messages: Belongs to the tannase family.

1401087:DAQ1742 RS06145
gene id: 1401087:DAQ1742_RS06145
uniprot id: A0A375A8G8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the acetokinase family.
messages: Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.
messages: Cytoplasm
messages: Homodimer.
messages: Mg(2+). Can also accept Mn(2+).

1401087:DAQ1742 RS19150
gene id: 1401087:DAQ1742_RS19150
uniprot id: A0A375AG61
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS17955
gene id: 1401087:DAQ1742_RS17955
uniprot id: A0A375AF79
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS14100
gene id: 1401087:DAQ1742_RS14100
uniprot id: A0A375ADH2
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase small chain family.

1401087:DAQ1742 RS06085
gene id: 1401087:DAQ1742_RS06085
uniprot id: A0A375A8F6
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS20070
gene id: 1401087:DAQ1742_RS20070
uniprot id: A0A375AGM2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the membrane-bound acyltransferase family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS12620
gene id: 1401087:DAQ1742_RS12620
uniprot id: A0A375ACH6
names: Function
names: PTM
names: Similarity
messages: Belongs to the NAPRTase family.
messages: Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.
messages: Transiently phosphorylated on a His residue during the reaction cycle. Phosphorylation strongly increases the affinity for substrates and increases the rate of nicotinate D-ribonucleotide production. Dephosphorylation regenerates the low-affinity form of the enzyme, leading to product release.

1401087:DAQ1742 RS05235
gene id: 1401087:DAQ1742_RS05235
uniprot id: A0A375A7S3
names: Similarity
messages: Belongs to the acylphosphatase family.

1401087:DAQ1742 RS17145
gene id: 1401087:DAQ1742_RS17145
uniprot id: A0A375AEQ0
names: Similarity
messages: Belongs to the four-carbon acid sugar kinase family.

1401087:DAQ1742 RS18360
gene id: 1401087:DAQ1742_RS18360
uniprot id: A0A375AFE5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL4 family.
messages: Forms part of the polypeptide exit tunnel.
messages: One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: Part of the 50S ribosomal subunit.

1401087:DAQ1742 RS19525
gene id: 1401087:DAQ1742_RS19525
uniprot id: A0A375AG39
names: Similarity
messages: Belongs to the ferredoxin--NADP reductase type 1 family.

1401087:DAQ1742 RS12755
gene id: 1401087:DAQ1742_RS12755
uniprot id: A0A375AC88
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS11730
gene id: 1401087:DAQ1742_RS11730
uniprot id: A0A375AC21
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS13480
gene id: 1401087:DAQ1742_RS13480
uniprot id: A0A375AD17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome ubiquinol oxidase subunit 2 family.
messages: Membrane

1401087:DAQ1742 RS12370
gene id: 1401087:DAQ1742_RS12370
uniprot id: A0A375ABV4
names: Function
names: Similarity
messages: Belongs to the glutaredoxin family. Monothiol subfamily.
messages: Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters.

1401087:DAQ1742 RS12470
gene id: 1401087:DAQ1742_RS12470
uniprot id: A0A375ACD6
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS17665
gene id: 1401087:DAQ1742_RS17665
uniprot id: A0A375AF16
names: Similarity
messages: Belongs to the UPF0246 family.

1401087:DAQ1742 RS19490
gene id: 1401087:DAQ1742_RS19490
uniprot id: A0A375AGB4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
messages: Belongs to the ClpX chaperone family. HslU subfamily.
messages: Cytoplasm

1401087:DAQ1742 RS13265
gene id: 1401087:DAQ1742_RS13265
uniprot id: A0A375ACY3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the uridine kinase family.
messages: Cytoplasm

1401087:DAQ1742 RS10210
gene id: 1401087:DAQ1742_RS10210
uniprot id: A0A375AB02
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phospholipase D family. Cardiolipin synthase subfamily. ClsA sub-subfamily.
messages: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS05275
gene id: 1401087:DAQ1742_RS05275
uniprot id: A0A375A7T0
names: Function
names: PTM
names: Similarity
messages: An intermediate of this reaction is the autophosphorylated ppk in which a phosphate is covalently linked to a histidine residue through a N-P bond.
messages: Belongs to the polyphosphate kinase 1 (PPK1) family.
messages: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).

1401087:DAQ1742 RS01350
gene id: 1401087:DAQ1742_RS01350
uniprot id: A0A375A5R4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

1401087:DAQ1742 RS12985
gene id: 1401087:DAQ1742_RS12985
uniprot id: A0A375ACE1
names: Similarity
messages: Belongs to the peptidase S16 family.

1401087:DAQ1742 RS16040
gene id: 1401087:DAQ1742_RS16040
uniprot id: A0A375AE09
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IspF family.
messages: Binds 1 divalent metal cation per subunit.
messages: Homotrimer.
messages: Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).

1401087:DAQ1742 RS07825
gene id: 1401087:DAQ1742_RS07825
uniprot id: A0A375A9B9
names: Similarity
messages: Belongs to the Dps family.

1401087:DAQ1742 RS10530
gene id: 1401087:DAQ1742_RS10530
uniprot id: A0A375AB90
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CutC family.
messages: Cytoplasm
messages: Once thought to be involved in copper homeostasis, experiments in E.coli have shown this is not the case.

1401087:DAQ1742 RS03730
gene id: 1401087:DAQ1742_RS03730
uniprot id: A0A375A796
names: Similarity
messages: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family.

1401087:DAQ1742 RS16080
gene id: 1401087:DAQ1742_RS16080
uniprot id: A0A375AEJ7
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Alpha(8)-beta(8). The alpha component is a flavoprotein, the beta component is a hemoprotein.
messages: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Binds 1 siroheme per subunit.
messages: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate.

1401087:DAQ1742 RS16230
gene id: 1401087:DAQ1742_RS16230
uniprot id: A0A375AFI4
names: Function
names: Similarity
names: Subunit
messages: Catalyzes the ADP transfer from ATP to D-glycero-beta-D-manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
messages: Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate at the C-1 position to selectively form D-glycero-beta-D-manno-heptose-1,7-bisphosphate.
messages: Homodimer.
messages: In the C-terminal section; belongs to the cytidylyltransferase family.
messages: In the N-terminal section; belongs to the carbohydrate kinase PfkB family.

1401087:DAQ1742 RS13940
gene id: 1401087:DAQ1742_RS13940
uniprot id: A0A375AE94
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AIR synthase family.
messages: Cytoplasm

1401087:DAQ1742 RS04150
gene id: 1401087:DAQ1742_RS04150
uniprot id: A0A375A7I8
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS12230
gene id: 1401087:DAQ1742_RS12230
uniprot id: A0A375ACB8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS15095
gene id: 1401087:DAQ1742_RS15095
uniprot id: A0A375ADR9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DXR family.
messages: Catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
messages: Homodimer.

1401087:DAQ1742 RS10345
gene id: 1401087:DAQ1742_RS10345
uniprot id: A0A375AAT9
names: Function
names: Similarity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
messages: Catalyzes the oxidative phosphorylation of glyceraldehyde 3-phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG.

1401087:DAQ1742 RS17255
gene id: 1401087:DAQ1742_RS17255
uniprot id: A0A375AEX5
names: Similarity
messages: Belongs to the GSP E family.

1401087:DAQ1742 RS12500
gene id: 1401087:DAQ1742_RS12500
uniprot id: A0A375ABY6
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the thioesterase PaaI family.
messages: Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA).
messages: Homotetramer. Dimer of dimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS20075
gene id: 1401087:DAQ1742_RS20075
uniprot id: A0A375AGG3
names: Cofactor
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.

1401087:DAQ1742 RS15695
gene id: 1401087:DAQ1742_RS15695
uniprot id: A0A375ADT1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Crl family.
messages: Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS01520
gene id: 1401087:DAQ1742_RS01520
uniprot id: A0A375A5V0
names: Cofactor
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.

1401087:DAQ1742 RS19035
gene id: 1401087:DAQ1742_RS19035
uniprot id: A0A375AGG1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
messages: Mediates influx of magnesium ions.
messages: Membrane

1401087:DAQ1742 RS10015
gene id: 1401087:DAQ1742_RS10015
uniprot id: A0A375AAW3
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS17260
gene id: 1401087:DAQ1742_RS17260
uniprot id: A0A375AF98
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Membrane

1401087:DAQ1742 RS17290
gene id: 1401087:DAQ1742_RS17290
uniprot id: A0A375AET4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SecM family.
messages: Periplasm
messages: Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation.
messages: cytosol

1401087:DAQ1742 RS04980
gene id: 1401087:DAQ1742_RS04980
uniprot id: A0A375A7M5
names: Cofactor
names: Function
messages: Binds 1 [2Fe-2S] cluster.
messages: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.

1401087:DAQ1742 RS16185
gene id: 1401087:DAQ1742_RS16185
uniprot id: A0A375AE39
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS11405
gene id: 1401087:DAQ1742_RS11405
uniprot id: A0A375ACR3
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS08400
gene id: 1401087:DAQ1742_RS08400
uniprot id: A0A375A9N5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone-like protein H-NS family.
messages: nucleoid

1401087:DAQ1742 RS06040
gene id: 1401087:DAQ1742_RS06040
uniprot id: A0A375A8B5
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.

1401087:DAQ1742 RS05005
gene id: 1401087:DAQ1742_RS05005
uniprot id: A0A375A7Y8
names: Function
names: Similarity
messages: Belongs to the heat shock protein 70 family.
messages: Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU.

1401087:DAQ1742 RS07350
gene id: 1401087:DAQ1742_RS07350
uniprot id: A0A375A912
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dethiobiotin synthetase family.
messages: Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS13725
gene id: 1401087:DAQ1742_RS13725
uniprot id: A0A375ACX6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the endoribonuclease YbeY family.
messages: Binds 1 zinc ion.
messages: Cytoplasm
messages: Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.

1401087:DAQ1742 RS11215
gene id: 1401087:DAQ1742_RS11215
uniprot id: A0A375AB63
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NAD synthetase family.
messages: Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
messages: Homodimer.

1401087:DAQ1742 RS20360
gene id: 1401087:DAQ1742_RS20360
uniprot id: A0A375AGJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase A chain family.
messages: Cell membrane
messages: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
messages: Membrane

1401087:DAQ1742 RS09100
gene id: 1401087:DAQ1742_RS09100
uniprot id: A0A375A9X9
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS04125
gene id: 1401087:DAQ1742_RS04125
uniprot id: A0A375A769
names: Similarity
messages: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.

1401087:DAQ1742 RS04430
gene id: 1401087:DAQ1742_RS04430
uniprot id: A0A375A7C4
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS06580
gene id: 1401087:DAQ1742_RS06580
uniprot id: A0A375A8R8
names: Function
names: Similarity
messages: Belongs to the FlgN family.
messages: Required for the efficient initiation of filament assembly.

1401087:DAQ1742 RS06110
gene id: 1401087:DAQ1742_RS06110
uniprot id: A0A375A886
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane

1401087:DAQ1742 RS11450
gene id: 1401087:DAQ1742_RS11450
uniprot id: A0A375ABG6
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS02765
gene id: 1401087:DAQ1742_RS02765
uniprot id: A0A375A6N5
names: Similarity
messages: Belongs to the pirin family.

1401087:DAQ1742 RS13390
gene id: 1401087:DAQ1742_RS13390
uniprot id: A0A375ACH2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.
messages: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
messages: Homodimer.

1401087:DAQ1742 RS15065
gene id: 1401087:DAQ1742_RS15065
uniprot id: A0A375AE14
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
messages: Catalyzes the N-acylation of UDP-3-O-(hydroxytetradecanoyl)glucosamine using 3-hydroxytetradecanoyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
messages: Homotrimer.

1401087:DAQ1742 RS07105
gene id: 1401087:DAQ1742_RS07105
uniprot id: A0A375A926
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nlpA lipoprotein family.
messages: Membrane

1401087:DAQ1742 RS10100
gene id: 1401087:DAQ1742_RS10100
uniprot id: A0A375AAQ7
names: Similarity
messages: Belongs to the peptidase S49 family.

1401087:DAQ1742 RS08520
gene id: 1401087:DAQ1742_RS08520
uniprot id: A0A375A9Q2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrC family.
messages: Cytoplasm
messages: Interacts with UvrB in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.

1401087:DAQ1742 RS03165
gene id: 1401087:DAQ1742_RS03165
uniprot id: A0A375A6X8
names: Cofactor
names: Function
names: PTM
names: Similarity
messages: Activated by phosphorylation.
messages: Belongs to the phosphohexose mutase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.

1401087:DAQ1742 RS11240
gene id: 1401087:DAQ1742_RS11240
uniprot id: A0A375ABK1
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

1401087:DAQ1742 RS16460
gene id: 1401087:DAQ1742_RS16460
uniprot id: A0A375AEA3
names: Similarity
messages: Belongs to the UPF0235 family.

1401087:DAQ1742 RS13170
gene id: 1401087:DAQ1742_RS13170
uniprot id: A0A375ACP0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliN/MopA/SpaO family.
messages: Cell membrane
messages: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

1401087:DAQ1742 RS04990
gene id: 1401087:DAQ1742_RS04990
uniprot id: A0A375A7S4
names: Function
names: Similarity
messages: A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
messages: Belongs to the NifU family.

1401087:DAQ1742 RS07965
gene id: 1401087:DAQ1742_RS07965
uniprot id: A0A375A9M8
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS06440
gene id: 1401087:DAQ1742_RS06440
uniprot id: A0A375A8Z6
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS14590
gene id: 1401087:DAQ1742_RS14590
uniprot id: A0A375ADR3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Cytoplasm
messages: Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

1401087:DAQ1742 RS17715
gene id: 1401087:DAQ1742_RS17715
uniprot id: A0A375AF25
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TrpR family.
messages: Cytoplasm
messages: Homodimer.
messages: This protein is an aporepressor. When complexed with L-tryptophan it binds the operator region of the trp operon (5'-ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.

1401087:DAQ1742 RS06910
gene id: 1401087:DAQ1742_RS06910
uniprot id: A0A375A990
names: Similarity
messages: Belongs to the IucA/IucC family.

1401087:DAQ1742 RS16000
gene id: 1401087:DAQ1742_RS16000
uniprot id: A0A375AFD3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RcsF family.
messages: Cell outer membrane
messages: Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects.

1401087:DAQ1742 RS18980
gene id: 1401087:DAQ1742_RS18980
uniprot id: A0A375AFT3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
messages: Membrane

1401087:DAQ1742 RS19270
gene id: 1401087:DAQ1742_RS19270
uniprot id: A0A375AH82
names: Function
names: Similarity
names: Subunit
messages: Belongs to the helicase family. UvrD subfamily.
messages: Homodimer.
messages: Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.

1401087:DAQ1742 RS18335
gene id: 1401087:DAQ1742_RS18335
uniprot id: A0A375AFG2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
messages: Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

1401087:DAQ1742 RS18075
gene id: 1401087:DAQ1742_RS18075
uniprot id: A0A375AFT8
names: Similarity
messages: Belongs to the radical SAM superfamily. KamA family.

1401087:DAQ1742 RS12445
gene id: 1401087:DAQ1742_RS12445
uniprot id: A0A375AC53
names: Similarity
messages: Belongs to the cytochrome P450 family.

1401087:DAQ1742 RS04520
gene id: 1401087:DAQ1742_RS04520
uniprot id: A0A375A8R5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase H family.
messages: Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
messages: Monomer.

1401087:DAQ1742 RS11025
gene id: 1401087:DAQ1742_RS11025
uniprot id: A0A375ABI8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS15190
gene id: 1401087:DAQ1742_RS15190
uniprot id: A0A375AE17
names: Similarity
messages: Belongs to the SufE family.

1401087:DAQ1742 RS05180
gene id: 1401087:DAQ1742_RS05180
uniprot id: A0A375A839
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
messages: Membrane

1401087:DAQ1742 RS15090
gene id: 1401087:DAQ1742_RS15090
uniprot id: A0A375AE05
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the UPP synthase family.
messages: Binds 2 magnesium ions per subunit.
messages: Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.
messages: Homodimer.

1401087:DAQ1742 RS12725
gene id: 1401087:DAQ1742_RS12725
uniprot id: A0A375AC25
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

1401087:DAQ1742 RS14765
gene id: 1401087:DAQ1742_RS14765
uniprot id: A0A375ADU9
names: Function
messages: Member of the two-component regulatory system PhoR/PhoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoB in response to environmental signals.

1401087:DAQ1742 RS16405
gene id: 1401087:DAQ1742_RS16405
uniprot id: A0A375AEI6
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS09145
gene id: 1401087:DAQ1742_RS09145
uniprot id: A0A375AA52
names: Cofactor
names: Similarity
messages: Belongs to the iron-containing alcohol dehydrogenase family.
messages: Binds 1 zinc ion per subunit.

1401087:DAQ1742 RS00355
gene id: 1401087:DAQ1742_RS00355
uniprot id: A0A375A563
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS04685
gene id: 1401087:DAQ1742_RS04685
uniprot id: A0A375A7R8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic sulfate-binding protein family.
messages: Periplasm

1401087:DAQ1742 RS17735
gene id: 1401087:DAQ1742_RS17735
uniprot id: A0A375AFK2
names: Function
names: Similarity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L-serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate.

1401087:DAQ1742 RS03780
gene id: 1401087:DAQ1742_RS03780
uniprot id: A0A375A7A2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS12595
gene id: 1401087:DAQ1742_RS12595
uniprot id: A0A375AC78
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS03460
gene id: 1401087:DAQ1742_RS03460
uniprot id: A0A375A750
names: Function
names: Similarity
messages: Belongs to the glucose-1-phosphate thymidylyltransferase family.
messages: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis.

1401087:DAQ1742 RS04800
gene id: 1401087:DAQ1742_RS04800
uniprot id: A0A375A7U3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS01250
gene id: 1401087:DAQ1742_RS01250
uniprot id: A0A375A5U4
names: Similarity
messages: Belongs to the IMPACT family.

1401087:DAQ1742 RS01000
gene id: 1401087:DAQ1742_RS01000
uniprot id: A0A375A5P7
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

1401087:DAQ1742 RS13520
gene id: 1401087:DAQ1742_RS13520
uniprot id: A0A375AE08
names: Cofactor
names: Function
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane
messages: Membrane-anchoring subunit of succinate dehydrogenase (SDH).
messages: The heme is bound between the two transmembrane subunits.

1401087:DAQ1742 RS19960
gene id: 1401087:DAQ1742_RS19960
uniprot id: A0A375AGF4
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS02050
gene id: 1401087:DAQ1742_RS02050
uniprot id: A0A375A6B8
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS05685
gene id: 1401087:DAQ1742_RS05685
uniprot id: A0A375A808
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Cell inner membrane
messages: Component of the type II secretion system inner membrane complex required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm.
messages: Membrane

1401087:DAQ1742 RS17630
gene id: 1401087:DAQ1742_RS17630
uniprot id: A0A375AF20
names: Function
names: Induction
names: Similarity
messages: Acts as a chaperone.
messages: Belongs to the heat shock protein 70 family.
messages: By stress conditions e.g. heat shock.

1401087:DAQ1742 RS00230
gene id: 1401087:DAQ1742_RS00230
uniprot id: A0A375A565
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS14500
gene id: 1401087:DAQ1742_RS14500
uniprot id: A0A375A9C2
names: Similarity
messages: Belongs to the myoviridae tail sheath protein family.

1401087:DAQ1742 RS03980
gene id: 1401087:DAQ1742_RS03980
uniprot id: A0A375A7C0
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

1401087:DAQ1742 RS06640
gene id: 1401087:DAQ1742_RS06640
uniprot id: A0A375A8T7
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the flagella basal body rod proteins family.
messages: Secreted

1401087:DAQ1742 RS17670
gene id: 1401087:DAQ1742_RS17670
uniprot id: A0A375AF26
names: Similarity
messages: Belongs to the threonine synthase family.

1401087:DAQ1742 RS16470
gene id: 1401087:DAQ1742_RS16470
uniprot id: A0A375AE98
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anaerobic coproporphyrinogen-III oxidase family. HemW subfamily.
messages: Cytoplasm
messages: Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.

1401087:DAQ1742 RS17330
gene id: 1401087:DAQ1742_RS17330
uniprot id: A0A375AG64
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 28 family. MurG subfamily.
messages: Cell membrane
messages: Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).

1401087:DAQ1742 RS05650
gene id: 1401087:DAQ1742_RS05650
uniprot id: A0A375A8D2
names: Similarity
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS03835
gene id: 1401087:DAQ1742_RS03835
uniprot id: A0A375A702
names: Similarity
messages: Belongs to the UPF0125 (RnfH) family.

1401087:DAQ1742 RS07950
gene id: 1401087:DAQ1742_RS07950
uniprot id: A0A375A9C1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS00430
gene id: 1401087:DAQ1742_RS00430
uniprot id: A0A375A5E8
names: Similarity
messages: Belongs to the peptidase M16 family.

1401087:DAQ1742 RS13385
gene id: 1401087:DAQ1742_RS13385
uniprot id: A0A375ACK1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Membrane

1401087:DAQ1742 RS13130
gene id: 1401087:DAQ1742_RS13130
uniprot id: A0A375ADT3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the FliF family.
messages: Membrane
messages: The M ring may be actively involved in energy transduction.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The M ring is integral to the inner membrane of the cell and may be connected to the flagellar rod via the S ring. The S (supramembrane ring) lies just distal to the M ring. The L and P rings lie in the outer membrane and the periplasmic space, respectively.

1401087:DAQ1742 RS00290
gene id: 1401087:DAQ1742_RS00290
uniprot id: A0A375A591
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal stress protein A family.
messages: Cytoplasm

1401087:DAQ1742 RS14315
gene id: 1401087:DAQ1742_RS14315
uniprot id: A0A375ADL3
names: Similarity
messages: Belongs to the ner transcriptional regulatory family.

1401087:DAQ1742 RS03370
gene id: 1401087:DAQ1742_RS03370
uniprot id: A0A375A727
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvP family.
messages: The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

1401087:DAQ1742 RS07340
gene id: 1401087:DAQ1742_RS07340
uniprot id: A0A375A8Y0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily.
messages: Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
messages: Homodimer.

1401087:DAQ1742 RS01775
gene id: 1401087:DAQ1742_RS01775
uniprot id: A0A375A680
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptA family.
messages: Component of the lipopolysaccharide transport and assembly complex.
messages: Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
messages: Periplasm

1401087:DAQ1742 RS04435
gene id: 1401087:DAQ1742_RS04435
uniprot id: A0A375A8Q6
names: Function
names: Subcellular Location Annotation
messages: Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate.
messages: Cytoplasm

1401087:DAQ1742 RS13590
gene id: 1401087:DAQ1742_RS13590
uniprot id: A0A375ACN2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the KdpC family.
messages: Cell membrane
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

1401087:DAQ1742 RS10495
gene id: 1401087:DAQ1742_RS10495
uniprot id: A0A375AAR3
names: Cofactor
messages: Binds 1 Mg(2+) ion per subunit.

1401087:DAQ1742 RS14775
gene id: 1401087:DAQ1742_RS14775
uniprot id: A0A375AD91
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SbcD family.
messages: Heterodimer of SbcC and SbcD.
messages: SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity.

1401087:DAQ1742 RS18810
gene id: 1401087:DAQ1742_RS18810
uniprot id: A0A375AG74
names: Similarity
messages: Belongs to the disproportionating enzyme family.

1401087:DAQ1742 RS05075
gene id: 1401087:DAQ1742_RS05075
uniprot id: A0A375A824
names: Function
names: Similarity
names: Subunit
messages: Associates with the 50S ribosomal subunit.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
messages: GTPase that plays an essential role in the late steps of ribosome biogenesis.

1401087:DAQ1742 RS11770
gene id: 1401087:DAQ1742_RS11770
uniprot id: A0A375ABI5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.
messages: Belongs to the azoreductase type 1 family.
messages: Binds 1 FMN per subunit.
messages: Homodimer.
messages: Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones.

1401087:DAQ1742 RS01735
gene id: 1401087:DAQ1742_RS01735
uniprot id: A0A375A745
names: Similarity
messages: Belongs to the peptidase U62 family.

1401087:DAQ1742 RS03210
gene id: 1401087:DAQ1742_RS03210
uniprot id: A0A375A6P4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

1401087:DAQ1742 RS06620
gene id: 1401087:DAQ1742_RS06620
uniprot id: A0A375A906
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

1401087:DAQ1742 RS18645
gene id: 1401087:DAQ1742_RS18645
uniprot id: A0A375AFL9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polysaccharide lyase 1 family.
messages: Secreted

1401087:DAQ1742 RS11415
gene id: 1401087:DAQ1742_RS11415
uniprot id: A0A375ABA8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
messages: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).

1401087:DAQ1742 RS05770
gene id: 1401087:DAQ1742_RS05770
uniprot id: A0A375A8A1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Fes family.
messages: Cytoplasm

1401087:DAQ1742 RS06975
gene id: 1401087:DAQ1742_RS06975
uniprot id: A0A375AAD1
names: Function
messages: Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase.

1401087:DAQ1742 RS10810
gene id: 1401087:DAQ1742_RS10810
uniprot id: A0A375ABD6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial secretin family. T3SS SctC subfamily.
messages: Cell outer membrane
messages: Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane.
messages: Membrane
messages: The core secretion machinery of the T3SS is composed of approximately 20 different proteins, including cytoplasmic components, a base, an export apparatus and a needle. This subunit is part of the base, which anchors the injectisome in the bacterial cell envelope. Forms a stable homooligomeric complex.

1401087:DAQ1742 RS18400
gene id: 1401087:DAQ1742_RS18400
uniprot id: A0A375AFY2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

1401087:DAQ1742 RS09275
gene id: 1401087:DAQ1742_RS09275
uniprot id: A0A375ABJ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS06190
gene id: 1401087:DAQ1742_RS06190
uniprot id: A0A375A8I1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Cell membrane
messages: NDH-1 is composed of 13 different subunits. Subunits NuoB, CD, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1401087:DAQ1742 RS14085
gene id: 1401087:DAQ1742_RS14085
uniprot id: A0A375ACV5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
messages: Belongs to the topoisomerase GyrA/ParC subunit family.
messages: Belongs to the type II topoisomerase GyrA/ParC subunit family.
messages: Cytoplasm
messages: Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.
messages: Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.

1401087:DAQ1742 RS09625
gene id: 1401087:DAQ1742_RS09625
uniprot id: A0A375AAU1
names: Similarity
messages: Belongs to the UPF0434 family.

1401087:DAQ1742 RS06195
gene id: 1401087:DAQ1742_RS06195
uniprot id: A0A375A8T8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: In the C-terminal section; belongs to the complex I 49 kDa subunit family.
messages: In the N-terminal section; belongs to the complex I 30 kDa subunit family.
messages: NDH-1 is composed of 13 different subunits. Subunits NuoB, CD, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

1401087:DAQ1742 RS16455
gene id: 1401087:DAQ1742_RS16455
uniprot id: A0A375AFN7
names: Similarity
messages: Belongs to the YggT family.

1401087:DAQ1742 RS10980
gene id: 1401087:DAQ1742_RS10980
uniprot id: A0A375AB11
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS10350
gene id: 1401087:DAQ1742_RS10350
uniprot id: A0A375AAN5
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

1401087:DAQ1742 RS01195
gene id: 1401087:DAQ1742_RS01195
uniprot id: A0A375A5P5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatB family.
messages: Cell membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
messages: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.

1401087:DAQ1742 RS15105
gene id: 1401087:DAQ1742_RS15105
uniprot id: A0A375AEW8
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by GTP. Inhibited by UTP.
messages: Belongs to the UMP kinase family.
messages: Catalyzes the reversible phosphorylation of UMP to UDP.
messages: Cytoplasm
messages: Homohexamer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS03215
gene id: 1401087:DAQ1742_RS03215
uniprot id: A0A375A6Y5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the polyribonucleotide nucleotidyltransferase family.
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.
messages: Cytoplasm
messages: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.

1401087:DAQ1742 RS02735
gene id: 1401087:DAQ1742_RS02735
uniprot id: A0A375A6R7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UbiC family.
messages: Cytoplasm
messages: Monomer.
messages: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway.

1401087:DAQ1742 RS10475
gene id: 1401087:DAQ1742_RS10475
uniprot id: A0A375AAY3
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuvA family.
messages: Cytoplasm
messages: Has three domains with a flexible linker between the domains II and III and assumes an 'L' shape. Domain III is highly mobile and contacts RuvB.
messages: Homotetramer. Forms an RuvA(8)-RuvB(12)-Holliday junction (HJ) complex. HJ DNA is sandwiched between 2 RuvA tetramers; dsDNA enters through RuvA and exits via RuvB. An RuvB hexamer assembles on each DNA strand where it exits the tetramer. Each RuvB hexamer is contacted by two RuvA subunits (via domain III) on 2 adjacent RuvB subunits; this complex drives branch migration. In the full resolvosome a probable DNA-RuvA(4)-RuvB(12)-RuvC(2) complex forms which resolves the HJ.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.

1401087:DAQ1742 RS15110
gene id: 1401087:DAQ1742_RS15110
uniprot id: A0A375ADI3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
messages: Belongs to the EF-Ts family.
messages: Cytoplasm

1401087:DAQ1742 RS19435
gene id: 1401087:DAQ1742_RS19435
uniprot id: A0A375AG36
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS13175
gene id: 1401087:DAQ1742_RS13175
uniprot id: A0A375ACD3
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliO/MopB family.
messages: Cell membrane

1401087:DAQ1742 RS04005
gene id: 1401087:DAQ1742_RS04005
uniprot id: A0A375A8J3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DHBP synthase family.
messages: Binds 2 divalent metal cations per subunit. Magnesium or manganese.
messages: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
messages: Homodimer.

1401087:DAQ1742 RS17870
gene id: 1401087:DAQ1742_RS17870
uniprot id: A0A375AFA0
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IPP transferase family.
messages: Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

1401087:DAQ1742 RS09250
gene id: 1401087:DAQ1742_RS09250
uniprot id: A0A375AA07
names: Similarity
messages: Belongs to the flavin oxidoreductase frp family.

1401087:DAQ1742 RS07510
gene id: 1401087:DAQ1742_RS07510
uniprot id: A0A375A9B8
names: Similarity
messages: Belongs to the peptidase S11 family.

1401087:DAQ1742 RS01340
gene id: 1401087:DAQ1742_RS01340
uniprot id: A0A375A5Q9
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

1401087:DAQ1742 RS19745
gene id: 1401087:DAQ1742_RS19745
uniprot id: A0A375AHG1
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

1401087:DAQ1742 RS02535
gene id: 1401087:DAQ1742_RS02535
uniprot id: A0A375A6J1
names: Similarity
messages: Belongs to the UbiH/COQ6 family.

1401087:DAQ1742 RS19255
gene id: 1401087:DAQ1742_RS19255
uniprot id: A0A375AGG9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DEAD box helicase family. RhlB subfamily.
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.
messages: Cytoplasm
messages: DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA.

1401087:DAQ1742 RS19230
gene id: 1401087:DAQ1742_RS19230
uniprot id: A0A375AFY4
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

1401087:DAQ1742 RS13515
gene id: 1401087:DAQ1742_RS13515
uniprot id: A0A375ACK0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
messages: Cell inner membrane
messages: Membrane
messages: Two distinct, membrane-bound, FAD-containing enzymes are responsible for the catalysis of fumarate and succinate interconversion; the fumarate reductase is used in anaerobic growth, and the succinate dehydrogenase is used in aerobic growth.

1401087:DAQ1742 RS17270
gene id: 1401087:DAQ1742_RS17270
uniprot id: A0A375AES6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ZapD family.
messages: Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
messages: Cytoplasm
messages: Interacts with FtsZ.

1401087:DAQ1742 RS02070
gene id: 1401087:DAQ1742_RS02070
uniprot id: A0A375A679
names: Function
messages: Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.

1401087:DAQ1742 RS05090
gene id: 1401087:DAQ1742_RS05090
uniprot id: A0A375A7U8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseA family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

1401087:DAQ1742 RS05760
gene id: 1401087:DAQ1742_RS05760
uniprot id: A0A375A893
names: Similarity
messages: Belongs to the isochorismate synthase family.

1401087:DAQ1742 RS06585
gene id: 1401087:DAQ1742_RS06585
uniprot id: A0A375A8M9
names: Function
names: Similarity
messages: Belongs to the FlgM family.
messages: Responsible for the coupling of flagellin expression to flagellar assembly by preventing expression of the flagellin genes when a component of the middle class of proteins is defective. It negatively regulates flagellar genes by inhibiting the activity of FliA by directly binding to FliA.

1401087:DAQ1742 RS20310
gene id: 1401087:DAQ1742_RS20310
uniprot id: A0A375AGI7
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS09110
gene id: 1401087:DAQ1742_RS09110
uniprot id: A0A375AAJ7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the AP endonuclease 2 family.
messages: Binds 3 Zn(2+) ions.
messages: Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.

1401087:DAQ1742 RS13435
gene id: 1401087:DAQ1742_RS13435
uniprot id: A0A375ACJ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CpoB family.
messages: Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division.
messages: Periplasm

1401087:DAQ1742 RS03880
gene id: 1401087:DAQ1742_RS03880
uniprot id: A0A375A7G6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the aerobic coproporphyrinogen-III oxidase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.

1401087:DAQ1742 RS07005
gene id: 1401087:DAQ1742_RS07005
uniprot id: A0A375A909
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
messages: Periplasm

1401087:DAQ1742 RS12890
gene id: 1401087:DAQ1742_RS12890
uniprot id: A0A375ADM5
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

1401087:DAQ1742 RS05245
gene id: 1401087:DAQ1742_RS05245
uniprot id: A0A375A7X3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

1401087:DAQ1742 RS19880
gene id: 1401087:DAQ1742_RS19880
uniprot id: A0A375AG93
names: PTM
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. Hydantoinase/dihydropyrimidinase family.
messages: Carbamylation allows a single lysine to coordinate two divalent metal cations.

1401087:DAQ1742 RS02010
gene id: 1401087:DAQ1742_RS02010
uniprot id: A0A375A672
names: Similarity
messages: Belongs to the flavin oxidoreductase frp family.

1401087:DAQ1742 RS02285
gene id: 1401087:DAQ1742_RS02285
uniprot id: A0A375A6B5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptF/LptG family.
messages: Cell inner membrane
messages: Component of the lipopolysaccharide transport and assembly complex. The LptBFG transporter is composed of two ATP-binding proteins (LptB) and two transmembrane proteins (LptF and LptG).
messages: Membrane
messages: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane.

1401087:DAQ1742 RS14835
gene id: 1401087:DAQ1742_RS14835
uniprot id: A0A375ADW2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS01730
gene id: 1401087:DAQ1742_RS01730
uniprot id: A0A375A5X6
names: Similarity
messages: Belongs to the UPF0307 family.

1401087:DAQ1742 RS15690
gene id: 1401087:DAQ1742_RS15690
uniprot id: A0A375AE32
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutamate 5-kinase family.
messages: Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
messages: Cytoplasm

1401087:DAQ1742 RS06815
gene id: 1401087:DAQ1742_RS06815
uniprot id: A0A375A8Q2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS12145
gene id: 1401087:DAQ1742_RS12145
uniprot id: A0A375ABQ9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
messages: Cell inner membrane
messages: Membrane
messages: Zinc transporter. Acts as a Zn(2+):proton symporter, which likely mediates zinc ion uptake.

1401087:DAQ1742 RS06205
gene id: 1401087:DAQ1742_RS06205
uniprot id: A0A375A8A2
names: Function
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.

1401087:DAQ1742 RS16340
gene id: 1401087:DAQ1742_RS16340
uniprot id: A0A375AE77
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RIC family. YtfE subfamily.
messages: Cytoplasm
messages: Di-iron-containing protein involved in the repair of iron-sulfur clusters damaged by oxidative and nitrosative stress conditions.
messages: Homodimer.

1401087:DAQ1742 RS14045
gene id: 1401087:DAQ1742_RS14045
uniprot id: A0A375ADF3
names: Caution
names: Function
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
messages: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS16960
gene id: 1401087:DAQ1742_RS16960
uniprot id: A0A375AEK9
names: Caution
names: Function
names: Subunit
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.

1401087:DAQ1742 RS01825
gene id: 1401087:DAQ1742_RS01825
uniprot id: A0A375A687
names: Similarity
messages: Belongs to the BolA/IbaG family.

1401087:DAQ1742 RS00915
gene id: 1401087:DAQ1742_RS00915
uniprot id: A0A375A5X0
names: Similarity
messages: Belongs to the peptidase S58 family.

1401087:DAQ1742 RS14300
gene id: 1401087:DAQ1742_RS14300
uniprot id: A0A375ACZ3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the QueC family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).

1401087:DAQ1742 RS01530
gene id: 1401087:DAQ1742_RS01530
uniprot id: A0A375A683
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS14795
gene id: 1401087:DAQ1742_RS14795
uniprot id: A0A375AD90
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Membrane

1401087:DAQ1742 RS20080
gene id: 1401087:DAQ1742_RS20080
uniprot id: A0A375AGF6
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase Z family. RNase BN subfamily.
messages: Binds 2 Zn(2+) ions.
messages: Homodimer.
messages: Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities.

1401087:DAQ1742 RS17305
gene id: 1401087:DAQ1742_RS17305
uniprot id: A0A375AEY4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsZ family.
messages: Cytoplasm
messages: Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
messages: Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins.

1401087:DAQ1742 RS01155
gene id: 1401087:DAQ1742_RS01155
uniprot id: A0A375A5M8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
messages: Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.
messages: Cytoplasm

1401087:DAQ1742 RS16915
gene id: 1401087:DAQ1742_RS16915
uniprot id: A0A375AEJ9
names: Similarity
messages: Belongs to the ner transcriptional regulatory family.

1401087:DAQ1742 RS00360
gene id: 1401087:DAQ1742_RS00360
uniprot id: A0A375A6D1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:citrate (SCF) symporter family.
messages: Cell membrane

1401087:DAQ1742 RS15165
gene id: 1401087:DAQ1742_RS15165
uniprot id: A0A375AE35
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the Xni family.
messages: Binds 1 K(+) per subunit. The potassium ion strongly increases the affinity for DNA.
messages: Binds 2 Mg(2+) per subunit. Only one magnesium ion has a direct interaction with the protein, the other interactions are indirect.
messages: Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.

1401087:DAQ1742 RS06925
gene id: 1401087:DAQ1742_RS06925
uniprot id: A0A375AA51
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

1401087:DAQ1742 RS14190
gene id: 1401087:DAQ1742_RS14190
uniprot id: A0A375AD19
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS06545
gene id: 1401087:DAQ1742_RS06545
uniprot id: A0A375A8S9
names: Function
messages: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.

1401087:DAQ1742 RS18240
gene id: 1401087:DAQ1742_RS18240
uniprot id: A0A375AFV8
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

1401087:DAQ1742 RS18475
gene id: 1401087:DAQ1742_RS18475
uniprot id: A0A375AFI7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. KefB subfamily.
messages: Cell inner membrane
messages: Interacts with the regulatory subunit KefG.
messages: Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.

1401087:DAQ1742 RS03300
gene id: 1401087:DAQ1742_RS03300
uniprot id: A0A375A841
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

1401087:DAQ1742 RS18815
gene id: 1401087:DAQ1742_RS18815
uniprot id: A0A375AFY6
names: Function
names: Similarity
messages: Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.
messages: Belongs to the glycogen phosphorylase family.
messages: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.

1401087:DAQ1742 RS01255
gene id: 1401087:DAQ1742_RS01255
uniprot id: A0A375A5Q1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TrkH potassium transport family.
messages: Cell inner membrane
messages: Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA.
messages: Membrane

1401087:DAQ1742 RS05435
gene id: 1401087:DAQ1742_RS05435
uniprot id: A0A375A859
names: Similarity
messages: Belongs to the glycosyl hydrolase 42 family.

1401087:DAQ1742 RS05035
gene id: 1401087:DAQ1742_RS05035
uniprot id: A0A375A7V5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Homotetramer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

1401087:DAQ1742 RS17810
gene id: 1401087:DAQ1742_RS17810
uniprot id: A0A375AF63
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNA methyltransferase RsmE family.
messages: Cytoplasm
messages: Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.

1401087:DAQ1742 RS19110
gene id: 1401087:DAQ1742_RS19110
uniprot id: A0A375AH55
names: Similarity
messages: Belongs to the PrpD family.

1401087:DAQ1742 RS10385
gene id: 1401087:DAQ1742_RS10385
uniprot id: A0A375AAP3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ferritin family. Prokaryotic subfamily.
messages: Cytoplasm
messages: Iron-storage protein.

1401087:DAQ1742 RS00825
gene id: 1401087:DAQ1742_RS00825
uniprot id: A0A375A5E6
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS16540
gene id: 1401087:DAQ1742_RS16540
uniprot id: A0A375AEV4
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS01210
gene id: 1401087:DAQ1742_RS01210
uniprot id: A0A375A5S2
names: Similarity
names: Subunit
messages: Belongs to the ALAD family.
messages: Homooctamer.

1401087:DAQ1742 RS19885
gene id: 1401087:DAQ1742_RS19885
uniprot id: A0A375AHH7
names: Similarity
messages: Belongs to the dihydropyrimidine dehydrogenase family.

1401087:DAQ1742 RS12735
gene id: 1401087:DAQ1742_RS12735
uniprot id: A0A375ACL7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS20025
gene id: 1401087:DAQ1742_RS20025
uniprot id: A0A375AGC4
names: Similarity
messages: In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS19895
gene id: 1401087:DAQ1742_RS19895
uniprot id: A0A375AGE9
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS06985
gene id: 1401087:DAQ1742_RS06985
uniprot id: A0A375A976
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HpcH/HpaI aldolase family. Citrate lyase beta subunit subfamily.
messages: Cytoplasm
messages: Oligomer with a subunit composition of (alpha,beta,gamma)6.
messages: Represents a citryl-ACP lyase.

1401087:DAQ1742 RS00100
gene id: 1401087:DAQ1742_RS00100
uniprot id: A0A375A522
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. DsbA subfamily.
messages: Periplasm

1401087:DAQ1742 RS16535
gene id: 1401087:DAQ1742_RS16535
uniprot id: A0A375AEG8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.
messages: Homodimer.
messages: Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.

1401087:DAQ1742 RS07970
gene id: 1401087:DAQ1742_RS07970
uniprot id: A0A375A9E8
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS19775
gene id: 1401087:DAQ1742_RS19775
uniprot id: A0A375AGB0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

1401087:DAQ1742 RS09295
gene id: 1401087:DAQ1742_RS09295
uniprot id: A0A375AA80
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 3 family.
messages: Periplasm

1401087:DAQ1742 RS00130
gene id: 1401087:DAQ1742_RS00130
uniprot id: A0A375A598
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.

1401087:DAQ1742 RS03260
gene id: 1401087:DAQ1742_RS03260
uniprot id: A0A375A742
names: Similarity
messages: Belongs to the UPF0213 family.

1401087:DAQ1742 RS07430
gene id: 1401087:DAQ1742_RS07430
uniprot id: A0A375AAF9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the MoaC family.
messages: Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).
messages: Homohexamer; trimer of dimers.

1401087:DAQ1742 RS10410
gene id: 1401087:DAQ1742_RS10410
uniprot id: A0A375AB40
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PurK/PurT family.
messages: Homodimer.
messages: Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate.

1401087:DAQ1742 RS09895
gene id: 1401087:DAQ1742_RS09895
uniprot id: A0A375AAE0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS12480
gene id: 1401087:DAQ1742_RS12480
uniprot id: A0A375AC22
names: Similarity
messages: Belongs to the pyruvate kinase family.

1401087:DAQ1742 RS04985
gene id: 1401087:DAQ1742_RS04985
uniprot id: A0A375A7U4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
messages: Cytoplasm
messages: Homodimer. Forms a heterotetramer with IscU, interacts with other sulfur acceptors.
messages: Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.

1401087:DAQ1742 RS05705
gene id: 1401087:DAQ1742_RS05705
uniprot id: A0A375A813
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP J family.
messages: Cell inner membrane
messages: Component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm. Part of the pseudopilus tip complex that is critical for the recognition and binding of secretion substrates.
messages: Membrane

1401087:DAQ1742 RS10055
gene id: 1401087:DAQ1742_RS10055
uniprot id: A0A375AAP8
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
messages: Binds 3 [4Fe-4S] clusters.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

1401087:DAQ1742 RS13755
gene id: 1401087:DAQ1742_RS13755
uniprot id: A0A375ACQ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS13790
gene id: 1401087:DAQ1742_RS13790
uniprot id: A0A375AE57
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase RlmH family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.

1401087:DAQ1742 RS08915
gene id: 1401087:DAQ1742_RS08915
uniprot id: A0A375AAE9
names: Function
names: Similarity
names: Subunit
messages: A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD.
messages: Belongs to the RecD family.
messages: Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding.

1401087:DAQ1742 RS14295
gene id: 1401087:DAQ1742_RS14295
uniprot id: A0A375ADA3
names: Function
names: Similarity
messages: A cysteine desulfhydrase that generates hydrogen sulfide, H(2)S. The H(2)S produced by this enzyme may modulate central metabolism.
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family. Cds1 subfamily.

1401087:DAQ1742 RS15260
gene id: 1401087:DAQ1742_RS15260
uniprot id: A0A375AF00
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.
messages: Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS13235
gene id: 1401087:DAQ1742_RS13235
uniprot id: A0A375ACN4
names: Similarity
messages: Belongs to the UDPGP type 2 family.

1401087:DAQ1742 RS10520
gene id: 1401087:DAQ1742_RS10520
uniprot id: A0A375AC99
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoB family.
messages: Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS11500
gene id: 1401087:DAQ1742_RS11500
uniprot id: A0A375ABH6
names: Similarity
messages: Belongs to the peptidase S41A family.

1401087:DAQ1742 RS13410
gene id: 1401087:DAQ1742_RS13410
uniprot id: A0A375ADZ2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the quinolinate synthase family. Type 1 subfamily.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
messages: Cytoplasm

1401087:DAQ1742 RS07230
gene id: 1401087:DAQ1742_RS07230
uniprot id: A0A375AAB8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS10425
gene id: 1401087:DAQ1742_RS10425
uniprot id: A0A375AAX2
names: Caution
names: Function
names: Similarity
messages: Belongs to the glucose-6-phosphate dehydrogenase family.
messages: Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS12925
gene id: 1401087:DAQ1742_RS12925
uniprot id: A0A375ACQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0312 family. Type 1 subfamily.
messages: Periplasm

1401087:DAQ1742 RS01360
gene id: 1401087:DAQ1742_RS01360
uniprot id: A0A375A652
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

1401087:DAQ1742 RS03270
gene id: 1401087:DAQ1742_RS03270
uniprot id: A0A375A700
names: Function
names: Similarity
names: Subunit
messages: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
messages: Homodimer.
messages: The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.

1401087:DAQ1742 RS13750
gene id: 1401087:DAQ1742_RS13750
uniprot id: A0A375AD79
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS00505
gene id: 1401087:DAQ1742_RS00505
uniprot id: A0A375A592
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PanZ/PanM family.
messages: Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion.
messages: Interacts with PanD in the presence of CoA.

1401087:DAQ1742 RS02715
gene id: 1401087:DAQ1742_RS02715
uniprot id: A0A375A6M3
names: Similarity
messages: Belongs to the class-II fumarase/aspartase family. Aspartase subfamily.

1401087:DAQ1742 RS05015
gene id: 1401087:DAQ1742_RS05015
uniprot id: A0A375A907
names: Function
names: Similarity
messages: Belongs to the IscX family.
messages: May function as iron donor in the assembly of iron-sulfur clusters.

1401087:DAQ1742 RS04975
gene id: 1401087:DAQ1742_RS04975
uniprot id: A0A375A805
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
messages: Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS06250
gene id: 1401087:DAQ1742_RS06250
uniprot id: A0A375A8M0
names: Similarity
messages: Belongs to the PhzF family.

1401087:DAQ1742 RS07300
gene id: 1401087:DAQ1742_RS07300
uniprot id: A0A375A910
names: Function
names: Similarity
messages: Belongs to the MoeA family.
messages: Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP.

1401087:DAQ1742 RS12815
gene id: 1401087:DAQ1742_RS12815
uniprot id: A0A375AC46
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS19095
gene id: 1401087:DAQ1742_RS19095
uniprot id: A0A375AFV6
names: Function
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Involved in a late step of protoheme IX synthesis.
messages: Membrane

1401087:DAQ1742 RS15935
gene id: 1401087:DAQ1742_RS15935
uniprot id: A0A375AFC4
names: Similarity
messages: Belongs to the thioredoxin family.

1401087:DAQ1742 RS01580
gene id: 1401087:DAQ1742_RS01580
uniprot id: A0A375A639
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

1401087:DAQ1742 RS15315
gene id: 1401087:DAQ1742_RS15315
uniprot id: A0A375ADL4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Fe(2+)-trafficking protein family.
messages: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
messages: Monomer.

1401087:DAQ1742 RS13870
gene id: 1401087:DAQ1742_RS13870
uniprot id: A0A375AD05
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0370 family.
messages: Cell membrane

1401087:DAQ1742 RS01625
gene id: 1401087:DAQ1742_RS01625
uniprot id: A0A375A6A3
names: Function
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.

1401087:DAQ1742 RS01245
gene id: 1401087:DAQ1742_RS01245
uniprot id: A0A375A5P8
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M24B family. Bacterial-type prolidase subfamily.
messages: Binds 2 manganese ions per subunit.
messages: Splits dipeptides with a prolyl residue in the C-terminal position.

1401087:DAQ1742 RS00990
gene id: 1401087:DAQ1742_RS00990
uniprot id: A0A375A5T5
names: Similarity
messages: Belongs to the UPF0758 family. YicR subfamily.

1401087:DAQ1742 RS12140
gene id: 1401087:DAQ1742_RS12140
uniprot id: A0A375ACA0
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TtcA family.
messages: Binds 1 [4Fe-4S] cluster per subunit. The cluster is chelated by three Cys residues, the fourth Fe has a free coordination site that may bind a sulfur atom transferred from the persulfide of IscS.
messages: Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
messages: Cytoplasm
messages: Homodimer.
messages: The thiolation reaction likely consists of two steps: a first activation step by ATP to form an adenylated intermediate of the target base of tRNA, and a second nucleophilic substitution step of the sulfur (S) atom supplied by the hydrosulfide attached to the Fe-S cluster.

1401087:DAQ1742 RS01805
gene id: 1401087:DAQ1742_RS01805
uniprot id: A0A375A636
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MlaE permease family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the ABC transporter complex MlaFEDB, which is involved in a phospholipid transport pathway that maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. Probably responsible for the translocation of the substrate across the membrane.
messages: The complex is composed of two ATP-binding proteins (MlaF), two transmembrane proteins (MlaE), two cytoplasmic solute-binding proteins (MlaB) and six periplasmic solute-binding proteins (MlaD).

1401087:DAQ1742 RS07940
gene id: 1401087:DAQ1742_RS07940
uniprot id: A0A375A9A3
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS01335
gene id: 1401087:DAQ1742_RS01335
uniprot id: A0A375A5Z6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NusG family.
messages: Monomer. Interacts with the transcription termination factor Rho and with RNA polymerase.
messages: Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination.

1401087:DAQ1742 RS15440
gene id: 1401087:DAQ1742_RS15440
uniprot id: A0A375AE66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS04780
gene id: 1401087:DAQ1742_RS04780
uniprot id: A0A375A7Q9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E.
messages: Belongs to the RseA family.
messages: Cell inner membrane
messages: Interacts 1:1 with ECF RNA polymerase sigma-E (RpoE); this inhibits the interaction of sigma-E with the RNA polymerase catalytic core and leads to a decreased expression of sigma-E-regulated genes. Interacts with RseB.

1401087:DAQ1742 RS06855
gene id: 1401087:DAQ1742_RS06855
uniprot id: A0A375A8W9
names: Similarity
messages: Belongs to the peptidase C40 family.

1401087:DAQ1742 RS08215
gene id: 1401087:DAQ1742_RS08215
uniprot id: A0A375A9R7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS20365
gene id: 1401087:DAQ1742_RS20365
uniprot id: A0A375AHS2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS14740
gene id: 1401087:DAQ1742_RS14740
uniprot id: A0A375ADT9
names: Similarity
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.

1401087:DAQ1742 RS04630
gene id: 1401087:DAQ1742_RS04630
uniprot id: A0A375A7Q7
names: Function
names: Similarity
messages: Belongs to the 2H phosphoesterase superfamily. ThpR family.
messages: Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'-phosphomonoester.

1401087:DAQ1742 RS09505
gene id: 1401087:DAQ1742_RS09505
uniprot id: A0A375AAE5
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
messages: Homodimer.

1401087:DAQ1742 RS05040
gene id: 1401087:DAQ1742_RS05040
uniprot id: A0A375A7T2
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the radical SAM superfamily. RlmN family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Cytoplasm
messages: Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.
messages: Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity.

1401087:DAQ1742 RS13855
gene id: 1401087:DAQ1742_RS13855
uniprot id: A0A375ACS4
names: Similarity
messages: Belongs to the ArsC family.

1401087:DAQ1742 RS17420
gene id: 1401087:DAQ1742_RS17420
uniprot id: A0A375AF46
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
messages: Heterodimer of LeuC and LeuD.

1401087:DAQ1742 RS18270
gene id: 1401087:DAQ1742_RS18270
uniprot id: A0A375AG05
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Binds to the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

1401087:DAQ1742 RS12990
gene id: 1401087:DAQ1742_RS12990
uniprot id: A0A375ACR7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioester dehydratase family. FabA subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.

1401087:DAQ1742 RS18305
gene id: 1401087:DAQ1742_RS18305
uniprot id: A0A375AFP3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that bind and probably mediate the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

1401087:DAQ1742 RS13040
gene id: 1401087:DAQ1742_RS13040
uniprot id: A0A375ACS9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sigma-70 factor family. FliA subfamily.
messages: Cytoplasm
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes.

1401087:DAQ1742 RS05720
gene id: 1401087:DAQ1742_RS05720
uniprot id: A0A375A891
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP M family.
messages: Cell inner membrane
messages: Inner membrane component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm.
messages: Membrane

1401087:DAQ1742 RS16155
gene id: 1401087:DAQ1742_RS16155
uniprot id: A0A375AE27
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS17225
gene id: 1401087:DAQ1742_RS17225
uniprot id: A0A375AER8
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS00345
gene id: 1401087:DAQ1742_RS00345
uniprot id: A0A375A5L4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. DIT1 subfamily.
messages: Membrane

1401087:DAQ1742 RS17675
gene id: 1401087:DAQ1742_RS17675
uniprot id: A0A375AF09
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GHMP kinase family. Homoserine kinase subfamily.
messages: Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
messages: Cytoplasm

1401087:DAQ1742 RS19660
gene id: 1401087:DAQ1742_RS19660
uniprot id: A0A375AG70
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

1401087:DAQ1742 RS17795
gene id: 1401087:DAQ1742_RS17795
uniprot id: A0A375AF49
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit.
messages: Binds 2 divalent ions per subunit.
messages: Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.

1401087:DAQ1742 RS07420
gene id: 1401087:DAQ1742_RS07420
uniprot id: A0A375A9A4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. MoaA family.
messages: Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.
messages: Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.
messages: Monomer and homodimer.

1401087:DAQ1742 RS20205
gene id: 1401087:DAQ1742_RS20205
uniprot id: A0A375AGG6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ArnE family.
messages: Cell inner membrane
messages: Heterodimer of ArnE and ArnF.
messages: Membrane
messages: Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane.

1401087:DAQ1742 RS19235
gene id: 1401087:DAQ1742_RS19235
uniprot id: A0A375AGJ9
names: Similarity
messages: Belongs to the UDP-N-acetylglucosamine 2-epimerase family.

1401087:DAQ1742 RS00155
gene id: 1401087:DAQ1742_RS00155
uniprot id: A0A375A529
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.
messages: An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.
messages: Belongs to the DTD family.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS18175
gene id: 1401087:DAQ1742_RS18175
uniprot id: A0A375AFD2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the shikimate dehydrogenase family.
messages: Homodimer.
messages: Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).

1401087:DAQ1742 RS01465
gene id: 1401087:DAQ1742_RS01465
uniprot id: A0A375A5S4
names: Domain
names: Similarity
messages: Belongs to the PurH family.
messages: The IMP cyclohydrolase activity resides in the N-terminal region.

1401087:DAQ1742 RS01630
gene id: 1401087:DAQ1742_RS01630
uniprot id: A0A375A648
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type-II 3-dehydroquinase family.
messages: Catalyzes a trans-dehydration via an enolate intermediate.
messages: Homododecamer.

1401087:DAQ1742 RS09550
gene id: 1401087:DAQ1742_RS09550
uniprot id: A0A375AAD1
names: Function
messages: Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase.

1401087:DAQ1742 RS08800
gene id: 1401087:DAQ1742_RS08800
uniprot id: A0A375AB94
names: Similarity
messages: Belongs to the phage portal family. PBSX subfamily.

1401087:DAQ1742 RS09650
gene id: 1401087:DAQ1742_RS09650
uniprot id: A0A375AAQ6
names: Caution
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.
messages: Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS04750
gene id: 1401087:DAQ1742_RS04750
uniprot id: A0A375A7T7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
messages: Cytoplasm
messages: Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.

1401087:DAQ1742 RS06830
gene id: 1401087:DAQ1742_RS06830
uniprot id: A0A375A8U9
names: Similarity
messages: Belongs to the HupF/HypC family.

1401087:DAQ1742 RS03985
gene id: 1401087:DAQ1742_RS03985
uniprot id: A0A375A7E1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CysZ family.
messages: Cell inner membrane
messages: High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway.

1401087:DAQ1742 RS11110
gene id: 1401087:DAQ1742_RS11110
uniprot id: A0A375AB41
names: Similarity
messages: Belongs to the Nudix hydrolase family. PCD1 subfamily.

1401087:DAQ1742 RS15035
gene id: 1401087:DAQ1742_RS15035
uniprot id: A0A375ADJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).
messages: Belongs to the AccA family.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
messages: Cytoplasm

1401087:DAQ1742 RS01120
gene id: 1401087:DAQ1742_RS01120
uniprot id: A0A375A5U2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LysR transcriptional regulatory family.
messages: Cytoplasm

1401087:DAQ1742 RS06170
gene id: 1401087:DAQ1742_RS06170
uniprot id: A0A375A8R7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 5DNU family.
messages: Catalyzes the strictly specific dephosphorylation of 2'-deoxyribonucleoside 5'-monophosphates.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS15055
gene id: 1401087:DAQ1742_RS15055
uniprot id: A0A375AEV7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family. LpxA subfamily.
messages: Cytoplasm
messages: Homotrimer.
messages: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.

1401087:DAQ1742 RS18885
gene id: 1401087:DAQ1742_RS18885
uniprot id: A0A375AGD3
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS02790
gene id: 1401087:DAQ1742_RS02790
uniprot id: A0A375A6H3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DedA family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS09945
gene id: 1401087:DAQ1742_RS09945
uniprot id: A0A375AAL5
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS04380
gene id: 1401087:DAQ1742_RS04380
uniprot id: A0A375A7C1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LuxS family.
messages: Binds 1 Fe cation per subunit.
messages: Homodimer.
messages: Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).

1401087:DAQ1742 RS02130
gene id: 1401087:DAQ1742_RS02130
uniprot id: A0A375A6A2
names: Function
names: Similarity
messages: Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
messages: Belongs to the organic radical-activating enzymes family.

1401087:DAQ1742 RS18310
gene id: 1401087:DAQ1742_RS18310
uniprot id: A0A375AFD6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL24 family.
messages: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
messages: One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit.

1401087:DAQ1742 RS14220
gene id: 1401087:DAQ1742_RS14220
uniprot id: A0A375ADJ9
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

1401087:DAQ1742 RS10995
gene id: 1401087:DAQ1742_RS10995
uniprot id: A0A375ABA6
names: Function
names: Similarity
messages: Belongs to the DapA family.
messages: Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).

1401087:DAQ1742 RS18390
gene id: 1401087:DAQ1742_RS18390
uniprot id: A0A375AFE6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
messages: Cytoplasm

1401087:DAQ1742 RS02870
gene id: 1401087:DAQ1742_RS02870
uniprot id: A0A375A6Q4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ApbE family.
messages: Cell inner membrane
messages: Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
messages: Magnesium. Can also use manganese.

1401087:DAQ1742 RS00195
gene id: 1401087:DAQ1742_RS00195
uniprot id: A0A375A540
names: Function
names: Similarity
messages: Belongs to the relA/spoT family.
messages: In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.

1401087:DAQ1742 RS13845
gene id: 1401087:DAQ1742_RS13845
uniprot id: A0A375AD98
names: Subcellular Location Annotation
messages: Cytoplasm

1401087:DAQ1742 RS07935
gene id: 1401087:DAQ1742_RS07935
uniprot id: A0A375A9R5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DyP-type peroxidase family. EfeB subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group non-covalently per subunit.
messages: Homodimer. Part of a ferrous iron transporter composed of EfeU, EfeO and EfeB.
messages: Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the protoporphyrin ring intact.
messages: Periplasm

1401087:DAQ1742 RS04770
gene id: 1401087:DAQ1742_RS04770
uniprot id: A0A375A7W9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.
messages: Catalyzes the oxidation of L-aspartate to iminoaspartate.
messages: Cytoplasm

1401087:DAQ1742 RS07025
gene id: 1401087:DAQ1742_RS07025
uniprot id: A0A375AA72
names: Similarity
messages: Belongs to the glycosyl hydrolase.

1401087:DAQ1742 RS17155
gene id: 1401087:DAQ1742_RS17155
uniprot id: A0A375AEQ1
names: Similarity
messages: Belongs to the DapA family.

1401087:DAQ1742 RS00500
gene id: 1401087:DAQ1742_RS00500
uniprot id: A0A375A5I3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoH subfamily.
messages: Cytoplasm
messages: Interacts with the RNA polymerase core enzyme.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.

1401087:DAQ1742 RS13645
gene id: 1401087:DAQ1742_RS13645
uniprot id: A0A375ACW3
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

1401087:DAQ1742 RS06025
gene id: 1401087:DAQ1742_RS06025
uniprot id: A0A375A873
names: Similarity
messages: Belongs to the OsmC/Ohr family.

1401087:DAQ1742 RS02560
gene id: 1401087:DAQ1742_RS02560
uniprot id: A0A375A7N8
names: Similarity
messages: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.

1401087:DAQ1742 RS09755
gene id: 1401087:DAQ1742_RS09755
uniprot id: A0A375AAB0
names: Function
names: Similarity
messages: Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
messages: Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif.

1401087:DAQ1742 RS06340
gene id: 1401087:DAQ1742_RS06340
uniprot id: A0A375A8X5
names: Cofactor
names: Function
messages: Binds 4 [4Fe-4S] clusters per subunit.
messages: The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.

1401087:DAQ1742 RS01685
gene id: 1401087:DAQ1742_RS01685
uniprot id: A0A375A5W6
names: Similarity
messages: Belongs to the peptidase U62 family.

1401087:DAQ1742 RS06355
gene id: 1401087:DAQ1742_RS06355
uniprot id: A0A375A9S3
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS12705
gene id: 1401087:DAQ1742_RS12705
uniprot id: A0A375AC81
names: Caution
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 2 residues (Tyr-90 and Arg-93) present in a large hydrophobic pocket are probably involved in substrate specificity. They are important for desuccinylation activity, but dispensable for deacetylation activity.
messages: Belongs to the sirtuin family. Class III subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: NAD-dependent lysine deacetylase that specifically removes acetyl groups on target proteins. Also acts as a protein-lysine deacylase by mediating protein desuccinylation and de-2-hydroxyisobutyrylation. Modulates the activities of several proteins which are inactive in their acylated form.

1401087:DAQ1742 RS15640
gene id: 1401087:DAQ1742_RS15640
uniprot id: A0A375ADS8
names: Similarity
messages: Belongs to the short-chain fatty acyl-CoA assimilation regulator (ScfR) family.

1401087:DAQ1742 RS20210
gene id: 1401087:DAQ1742_RS20210
uniprot id: A0A375AHP6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 83 family.
messages: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS16305
gene id: 1401087:DAQ1742_RS16305
uniprot id: A0A375AEQ3
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS20215
gene id: 1401087:DAQ1742_RS20215
uniprot id: A0A375AGJ5
names: Function
names: Similarity
messages: Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.
messages: Catalyzes the deformylation of 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

1401087:DAQ1742 RS17240
gene id: 1401087:DAQ1742_RS17240
uniprot id: A0A375AES5
names: Similarity
messages: Belongs to the nucleoside-specific channel-forming outer membrane porin (Tsx) (TC 1.B.10) family.

1401087:DAQ1742 RS04015
gene id: 1401087:DAQ1742_RS04015
uniprot id: A0A375A7J2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-I fumarase family.
messages: Catalyzes the reversible hydration of fumarate to (S)-malate.
messages: Homodimer.

1401087:DAQ1742 RS15235
gene id: 1401087:DAQ1742_RS15235
uniprot id: A0A375ADJ3
names: Function
names: Similarity
messages: Belongs to the peptidase M16 family.
messages: Endopeptidase that degrades small peptides of less than 7 kDa, such as glucagon and insulin.

1401087:DAQ1742 RS15715
gene id: 1401087:DAQ1742_RS15715
uniprot id: A0A375ADU0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
messages: Cell membrane
messages: Homotetramer.
messages: Purine salvage pathway enzyme that catalyzes the transfer of the ribosyl-5-phosphate group from 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to the N9 position of the 6-oxopurines guanine and xanthine to form the corresponding ribonucleotides GMP (guanosine 5'-monophosphate) and XMP (xanthosine 5'-monophosphate), with the release of PPi. To a lesser extent, also acts on hypoxanthine.

1401087:DAQ1742 RS17805
gene id: 1401087:DAQ1742_RS17805
uniprot id: A0A375AF47
names: Similarity
messages: Belongs to the EndA/NucM nuclease family.

1401087:DAQ1742 RS05010
gene id: 1401087:DAQ1742_RS05010
uniprot id: A0A375A7M3
names: Similarity
messages: Belongs to the adrenodoxin/putidaredoxin family.

1401087:DAQ1742 RS05990
gene id: 1401087:DAQ1742_RS05990
uniprot id: A0A375A8E1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS12395
gene id: 1401087:DAQ1742_RS12395
uniprot id: A0A375ABW5
names: Function
messages: Catalyzes the dismutation of two molecules of 6,7-dimethyl-8-ribityllumazine, resulting in the formation of riboflavin and 5-amino-6-(D-ribitylamino)uracil.

1401087:DAQ1742 RS03280
gene id: 1401087:DAQ1742_RS03280
uniprot id: A0A375A6Z4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PNP/UDP phosphorylase family.
messages: Catalyzes the reversible phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
messages: Homohexamer; trimer of homodimers.

1401087:DAQ1742 RS00420
gene id: 1401087:DAQ1742_RS00420
uniprot id: A0A375A5H1
names: Similarity
messages: Belongs to the glycosyl hydrolase 8 (cellulase D) family.

1401087:DAQ1742 RS07030
gene id: 1401087:DAQ1742_RS07030
uniprot id: A0A375A8Y7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Oligosaccharide:H(+) symporter (OHS) (TC 2.A.1.5) family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS16425
gene id: 1401087:DAQ1742_RS16425
uniprot id: A0A375AE92
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Cell inner membrane

1401087:DAQ1742 RS03435
gene id: 1401087:DAQ1742_RS03435
uniprot id: A0A375A723
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 3 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS13925
gene id: 1401087:DAQ1742_RS13925
uniprot id: A0A375ADD3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaA family. HdA subfamily.
messages: Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA.
messages: The active form seems to be an ADP-bound monomer. Forms the RIDA complex (regulatory inactivation of DnaA) of ATP-DnaA, ADP-Hda and the DNA-loaded beta sliding clamp (dnaN).

1401087:DAQ1742 RS01010
gene id: 1401087:DAQ1742_RS01010
uniprot id: A0A375A5M4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial CoaD family.
messages: Cytoplasm
messages: Homohexamer.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

1401087:DAQ1742 RS05365
gene id: 1401087:DAQ1742_RS05365
uniprot id: A0A375A8F2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the metallo-dependent hydrolases superfamily. HutI family.
messages: Binds 1 zinc or iron ion per subunit.
messages: Catalyzes the hydrolytic cleavage of the carbon-nitrogen bond in imidazolone-5-propanoate to yield N-formimidoyl-L-glutamate. It is the third step in the universal histidine degradation pathway.
messages: Cytoplasm

1401087:DAQ1742 RS09540
gene id: 1401087:DAQ1742_RS09540
uniprot id: A0A375AAN6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:citrate (SCF) symporter family.
messages: Cell membrane

1401087:DAQ1742 RS13580
gene id: 1401087:DAQ1742_RS13580
uniprot id: A0A375AD45
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the KdpA family.
messages: Cell membrane
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the extracellular potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

1401087:DAQ1742 RS03870
gene id: 1401087:DAQ1742_RS03870
uniprot id: A0A375A8G1
names: Similarity
messages: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.
messages: In the N-terminal section; belongs to the malic enzymes family.

1401087:DAQ1742 RS19625
gene id: 1401087:DAQ1742_RS19625
uniprot id: A0A375AG79
names: Similarity
messages: Belongs to the acyl-CoA dehydrogenase family.

1401087:DAQ1742 RS06605
gene id: 1401087:DAQ1742_RS06605
uniprot id: A0A375A8J6
names: Function
names: Similarity
messages: Belongs to the FlgD family.
messages: Required for flagellar hook formation. May act as a scaffolding protein.

1401087:DAQ1742 RS12615
gene id: 1401087:DAQ1742_RS12615
uniprot id: A0A375ADH0
names: Similarity
messages: Belongs to the peptidase M1 family.

1401087:DAQ1742 RS10060
gene id: 1401087:DAQ1742_RS10060
uniprot id: A0A375AB26
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

1401087:DAQ1742 RS15100
gene id: 1401087:DAQ1742_RS15100
uniprot id: A0A375ADF6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRF family.
messages: Cytoplasm
messages: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.

1401087:DAQ1742 RS19610
gene id: 1401087:DAQ1742_RS19610
uniprot id: A0A375AG56
names: Similarity
messages: Belongs to the acyl-CoA dehydrogenase family.

1401087:DAQ1742 RS13295
gene id: 1401087:DAQ1742_RS13295
uniprot id: A0A375ACZ9
names: Function
names: Similarity
messages: Belongs to the cycloisomerase 2 family.
messages: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.

1401087:DAQ1742 RS06805
gene id: 1401087:DAQ1742_RS06805
uniprot id: A0A375A963
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS03850
gene id: 1401087:DAQ1742_RS03850
uniprot id: A0A375A7B0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD kinase family.
messages: Cytoplasm
messages: Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS13840
gene id: 1401087:DAQ1742_RS13840
uniprot id: A0A375ACV3
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fluoride channel Fluc/FEX (TC 1.A.43) family.
messages: Cell membrane
messages: Fluoride-specific ion channel. Important for reducing fluoride concentration in the cell, thus reducing its toxicity.
messages: Membrane
messages: Na(+) is not transported, but it plays an essential structural role and its presence is essential for fluoride channel function.

1401087:DAQ1742 RS09015
gene id: 1401087:DAQ1742_RS09015
uniprot id: A0A375AA99
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL25 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.
messages: This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.

1401087:DAQ1742 RS19225
gene id: 1401087:DAQ1742_RS19225
uniprot id: A0A375AH78
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the WecD family.
messages: Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino-4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA).
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS10365
gene id: 1401087:DAQ1742_RS10365
uniprot id: A0A375AB32
names: Similarity
messages: Belongs to the UPF0229 family.

1401087:DAQ1742 RS17765
gene id: 1401087:DAQ1742_RS17765
uniprot id: A0A375AF38
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the class II fructose-bisphosphate aldolase family.
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.
messages: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.

1401087:DAQ1742 RS14845
gene id: 1401087:DAQ1742_RS14845
uniprot id: A0A375AD94
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS17160
gene id: 1401087:DAQ1742_RS17160
uniprot id: A0A375AER6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

1401087:DAQ1742 RS18560
gene id: 1401087:DAQ1742_RS18560
uniprot id: A0A375AFK1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in both the arginine and lysine biosynthetic pathways.

1401087:DAQ1742 RS17825
gene id: 1401087:DAQ1742_RS17825
uniprot id: A0A375AFM3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YqgF HJR family.
messages: Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
messages: Cytoplasm

1401087:DAQ1742 RS02770
gene id: 1401087:DAQ1742_RS02770
uniprot id: A0A375A6L5
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS07995
gene id: 1401087:DAQ1742_RS07995
uniprot id: A0A375A9H5
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS13355
gene id: 1401087:DAQ1742_RS13355
uniprot id: A0A375ACT1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GHMP kinase family. GalK subfamily.
messages: Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P).
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS19575
gene id: 1401087:DAQ1742_RS19575
uniprot id: A0A375AG68
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family.

1401087:DAQ1742 RS00370
gene id: 1401087:DAQ1742_RS00370
uniprot id: A0A375A5G4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS02645
gene id: 1401087:DAQ1742_RS02645
uniprot id: A0A375A6X0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

1401087:DAQ1742 RS02120
gene id: 1401087:DAQ1742_RS02120
uniprot id: A0A375A6A9
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS01930
gene id: 1401087:DAQ1742_RS01930
uniprot id: A0A375A611
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmI family.
messages: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
messages: Cytoplasm

1401087:DAQ1742 RS00400
gene id: 1401087:DAQ1742_RS00400
uniprot id: A0A375A5G8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family.
messages: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS01135
gene id: 1401087:DAQ1742_RS01135
uniprot id: A0A375A5Q4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PNP/UDP phosphorylase family.
messages: Catalyzes the reversible phosphorylytic cleavage of uridine to uracil and ribose-1-phosphate.
messages: Cytoplasm

1401087:DAQ1742 RS02845
gene id: 1401087:DAQ1742_RS02845
uniprot id: A0A375A7U7
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS16100
gene id: 1401087:DAQ1742_RS16100
uniprot id: A0A375AE19
names: Similarity
messages: Belongs to the glycosyl hydrolase 28 family.

1401087:DAQ1742 RS00950
gene id: 1401087:DAQ1742_RS00950
uniprot id: A0A375A5P2
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS04825
gene id: 1401087:DAQ1742_RS04825
uniprot id: A0A375A7I9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P-Pant transferase superfamily. AcpS family.
messages: Cytoplasm
messages: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein.

1401087:DAQ1742 RS00185
gene id: 1401087:DAQ1742_RS00185
uniprot id: A0A375A559
names: Function
names: Similarity
messages: Belongs to the helicase family. RecG subfamily.
messages: Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA).

1401087:DAQ1742 RS03135
gene id: 1401087:DAQ1742_RS03135
uniprot id: A0A375A811
names: Similarity
messages: Belongs to the peptidase S13 family.

1401087:DAQ1742 RS05975
gene id: 1401087:DAQ1742_RS05975
uniprot id: A0A375A863
names: Function
names: Similarity
messages: Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
messages: Methylates ribosomal protein uL3 on a specific glutamine residue.

1401087:DAQ1742 RS14685
gene id: 1401087:DAQ1742_RS14685
uniprot id: A0A375ADD6
names: Function
names: Similarity
messages: Belongs to the NusB family.
messages: Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.

1401087:DAQ1742 RS06875
gene id: 1401087:DAQ1742_RS06875
uniprot id: A0A375AA36
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS05315
gene id: 1401087:DAQ1742_RS05315
uniprot id: A0A375A8E5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PurK/PurT family.
messages: Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
messages: Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
messages: Homodimer.

1401087:DAQ1742 RS19450
gene id: 1401087:DAQ1742_RS19450
uniprot id: A0A375AHA1
names: Similarity
names: Subunit
messages: Homotetramer.
messages: In the C-terminal section; belongs to the homoserine dehydrogenase family.
messages: In the N-terminal section; belongs to the aspartokinase family.

1401087:DAQ1742 RS04140
gene id: 1401087:DAQ1742_RS04140
uniprot id: A0A375A7G9
names: Similarity
messages: Belongs to the MipA/OmpV family.

1401087:DAQ1742 RS16335
gene id: 1401087:DAQ1742_RS16335
uniprot id: A0A375AE69
names: Similarity
messages: Belongs to the 5'-nucleotidase family.

1401087:DAQ1742 RS14660
gene id: 1401087:DAQ1742_RS14660
uniprot id: A0A375ADA6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ThiI family.
messages: Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS05710
gene id: 1401087:DAQ1742_RS05710
uniprot id: A0A375A883
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP K family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS05700
gene id: 1401087:DAQ1742_RS05700
uniprot id: A0A375A8E8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GSP I family.
messages: Cell inner membrane
messages: Cleaved by prepilin peptidase.
messages: Component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm.
messages: Membrane
messages: Type II secretion is composed of four main components: the outer membrane complex, the inner membrane complex, the cytoplasmic secretion ATPase and the periplasm-spanning pseudopilus.

1401087:DAQ1742 RS10180
gene id: 1401087:DAQ1742_RS10180
uniprot id: A0A375AB20
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YciB family.
messages: Cell inner membrane
messages: Plays a role in cell envelope biogenesis, maintenance of cell envelope integrity and membrane homeostasis.

1401087:DAQ1742 RS13445
gene id: 1401087:DAQ1742_RS13445
uniprot id: A0A375ACI5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TolB family.
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. TolB occupies a key intermediary position in the Tol-Pal system because it communicates directly with both membrane-embedded components, Pal in the outer membrane and TolA in the inner membrane.
messages: Periplasm
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

1401087:DAQ1742 RS00050
gene id: 1401087:DAQ1742_RS00050
uniprot id: A0A375A539
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by a monovalent cation that binds near, but not in, the active site. The most likely occupant of the site in vivo is potassium. Ion binding induces a conformational change that may alter substrate affinity.
messages: Belongs to the carbohydrate kinase PfkB family. Ribokinase subfamily.
messages: Belongs to the carbohydrate kinase pfkB family.
messages: Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
messages: Cytoplasm
messages: Homodimer.
messages: Requires a divalent cation, most likely magnesium in vivo, as an electrophilic catalyst to aid phosphoryl group transfer. It is the chelate of the metal and the nucleotide that is the actual substrate.

1401087:DAQ1742 RS16235
gene id: 1401087:DAQ1742_RS16235
uniprot id: A0A375AE48
names: Function
names: Similarity
messages: Belongs to the GlnE family.
messages: Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell.

1401087:DAQ1742 RS02655
gene id: 1401087:DAQ1742_RS02655
uniprot id: A0A375A6E1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Homodimer.
messages: Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein.

1401087:DAQ1742 RS13745
gene id: 1401087:DAQ1742_RS13745
uniprot id: A0A375ACT4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS18670
gene id: 1401087:DAQ1742_RS18670
uniprot id: A0A375AG44
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of tryptophan to tRNA(Trp).
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS18060
gene id: 1401087:DAQ1742_RS18060
uniprot id: A0A375AFB3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the calycin superfamily. Lipocalin family.
messages: Cell outer membrane
messages: Homodimer.
messages: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.

1401087:DAQ1742 RS09090
gene id: 1401087:DAQ1742_RS09090
uniprot id: A0A375A9X2
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II FruAB PTS system is involved in fructose transport.

1401087:DAQ1742 RS03205
gene id: 1401087:DAQ1742_RS03205
uniprot id: A0A375A736
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
messages: Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.

1401087:DAQ1742 RS12385
gene id: 1401087:DAQ1742_RS12385
uniprot id: A0A375ACE8
names: Domain
names: Function
names: Subunit
messages: Consists of two structural and functional domains: an N-terminal DNA-binding domain, approximately the first 60 residues, and a larger C-terminal domain, approximately 280 residues, which imparts the function of corepressor binding and oligomerization.
messages: Homodimer.
messages: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression.

1401087:DAQ1742 RS05815
gene id: 1401087:DAQ1742_RS05815
uniprot id: A0A375A834
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. EntS (TC 2.A.1.38) family.
messages: Cell inner membrane
messages: Component of an export pathway for enterobactin.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS04600
gene id: 1401087:DAQ1742_RS04600
uniprot id: A0A375A7K4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PanB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.
messages: Cytoplasm
messages: Homodecamer; pentamer of dimers.

1401087:DAQ1742 RS01330
gene id: 1401087:DAQ1742_RS01330
uniprot id: A0A375A5T7
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS01300
gene id: 1401087:DAQ1742_RS01300
uniprot id: A0A375A5P4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic pantothenate kinase family.
messages: Cytoplasm

1401087:DAQ1742 RS17265
gene id: 1401087:DAQ1742_RS17265
uniprot id: A0A375AF15
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CoaE family.
messages: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
messages: Cytoplasm

1401087:DAQ1742 RS19105
gene id: 1401087:DAQ1742_RS19105
uniprot id: A0A375AFV1
names: Similarity
messages: Belongs to the PrpD family.

1401087:DAQ1742 RS03360
gene id: 1401087:DAQ1742_RS03360
uniprot id: A0A375A6T9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvT family.
messages: The glycine cleavage system catalyzes the degradation of glycine.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

1401087:DAQ1742 RS20085
gene id: 1401087:DAQ1742_RS20085
uniprot id: A0A375AGI8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RlmJ family.
messages: Monomer.
messages: Specifically methylates the adenine in position 2030 of 23S rRNA.

1401087:DAQ1742 RS14725
gene id: 1401087:DAQ1742_RS14725
uniprot id: A0A375ADA0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the queuine tRNA-ribosyltransferase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).
messages: Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1.

1401087:DAQ1742 RS00730
gene id: 1401087:DAQ1742_RS00730
uniprot id: A0A375A5K7
names: Similarity
messages: Belongs to the carbon-nitrogen hydrolase superfamily.

1401087:DAQ1742 RS16375
gene id: 1401087:DAQ1742_RS16375
uniprot id: A0A375AEV1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PriB family.
messages: Binds single-stranded DNA at the primosome assembly site (PAS).
messages: Component of the preprimosomal complex composed of PriA, PriB, PriC, DnaB and DnaT. Upon transient interaction with DnaG it forms the primosome.

1401087:DAQ1742 RS16110
gene id: 1401087:DAQ1742_RS16110
uniprot id: A0A375AE24
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.
messages: Binds 1 S-adenosyl-L-methionine per subunit.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS06060
gene id: 1401087:DAQ1742_RS06060
uniprot id: A0A375A876
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the tRNA pseudouridine synthase TruA family.
messages: Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS13020
gene id: 1401087:DAQ1742_RS13020
uniprot id: A0A375AC98
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS06105
gene id: 1401087:DAQ1742_RS06105
uniprot id: A0A375A8K4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane

1401087:DAQ1742 RS00095
gene id: 1401087:DAQ1742_RS00095
uniprot id: A0A375A5B5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.
messages: Belongs to the SrkA/RdoA protein kinase family.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS06550
gene id: 1401087:DAQ1742_RS06550
uniprot id: A0A375A8H9
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CheB family.
messages: Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.
messages: Cytoplasm
messages: Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
messages: Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.

1401087:DAQ1742 RS05220
gene id: 1401087:DAQ1742_RS05220
uniprot id: A0A375A944
names: Similarity
messages: Belongs to the UPF0319 family.

1401087:DAQ1742 RS03195
gene id: 1401087:DAQ1742_RS03195
uniprot id: A0A375A821
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.

1401087:DAQ1742 RS09955
gene id: 1401087:DAQ1742_RS09955
uniprot id: A0A375AAM8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dethiobiotin synthetase family.
messages: Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS13770
gene id: 1401087:DAQ1742_RS13770
uniprot id: A0A375ACY6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptE lipoprotein family.
messages: Cell outer membrane
messages: Component of the lipopolysaccharide transport and assembly complex. Interacts with LptD.
messages: Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.

1401087:DAQ1742 RS04805
gene id: 1401087:DAQ1742_RS04805
uniprot id: A0A375A7I5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribonuclease III family.
messages: Cytoplasm
messages: Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
messages: Homodimer.

1401087:DAQ1742 RS02310
gene id: 1401087:DAQ1742_RS02310
uniprot id: A0A375A6I7
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

1401087:DAQ1742 RS14115
gene id: 1401087:DAQ1742_RS14115
uniprot id: A0A375ACW5
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS03310
gene id: 1401087:DAQ1742_RS03310
uniprot id: A0A375A752
names: Function
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.

1401087:DAQ1742 RS03065
gene id: 1401087:DAQ1742_RS03065
uniprot id: A0A375A6W2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoD/SigA subfamily.
messages: Cytoplasm
messages: Interacts transiently with the RNA polymerase catalytic core.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.

1401087:DAQ1742 RS01595
gene id: 1401087:DAQ1742_RS01595
uniprot id: A0A375A5Y5
names: Function
names: Similarity
names: Subunit
messages: Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters.
messages: Belongs to the transcriptional regulatory Fis family.
messages: Homodimer.

1401087:DAQ1742 RS16050
gene id: 1401087:DAQ1742_RS16050
uniprot id: A0A375AE06
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsB family.
messages: Cell inner membrane
messages: Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
messages: Part of a complex composed of FtsB, FtsL and FtsQ.

1401087:DAQ1742 RS11505
gene id: 1401087:DAQ1742_RS11505
uniprot id: A0A375ABT9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ProQ family.
messages: Cytoplasm
messages: RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism.

1401087:DAQ1742 RS00890
gene id: 1401087:DAQ1742_RS00890
uniprot id: A0A375A5R9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

1401087:DAQ1742 RS00840
gene id: 1401087:DAQ1742_RS00840
uniprot id: A0A375A5Q8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS10140
gene id: 1401087:DAQ1742_RS10140
uniprot id: A0A375AAP9
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the anthranilate phosphoribosyltransferase family.
messages: Binds 2 magnesium ions per monomer.
messages: Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS12485
gene id: 1401087:DAQ1742_RS12485
uniprot id: A0A375ABX1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A highly abundant outer membrane lipoprotein that controls the distance between the inner and outer membranes. The only protein known to be covalently linked to the peptidoglycan network (PGN). Also non-covalently binds the PGN. The link between the cell outer membrane and PGN contributes to maintenance of the structural and functional integrity of the cell envelope, and maintains the correct distance between the PGN and the outer membrane.
messages: Belongs to the Lpp family.
messages: Cell outer membrane
messages: Homotrimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: cell wall

1401087:DAQ1742 RS06090
gene id: 1401087:DAQ1742_RS06090
uniprot id: A0A375A8C5
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
messages: In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS11640
gene id: 1401087:DAQ1742_RS11640
uniprot id: A0A375ABF8
names: Similarity
messages: Belongs to the myoviridae tail sheath protein family.

1401087:DAQ1742 RS10030
gene id: 1401087:DAQ1742_RS10030
uniprot id: A0A375AAP4
names: Similarity
messages: Belongs to the ribulokinase family.

1401087:DAQ1742 RS13765
gene id: 1401087:DAQ1742_RS13765
uniprot id: A0A375ACP5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm

1401087:DAQ1742 RS14690
gene id: 1401087:DAQ1742_RS14690
uniprot id: A0A375ADT4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DMRL synthase family.
messages: Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
messages: Forms an icosahedral capsid composed of 60 subunits, arranged as a dodecamer of pentamers.

1401087:DAQ1742 RS01785
gene id: 1401087:DAQ1742_RS01785
uniprot id: A0A375A751
names: Function
names: Similarity
names: Subunit
messages: Belongs to the KdsC family.
messages: Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate.
messages: Homotetramer.

1401087:DAQ1742 RS18895
gene id: 1401087:DAQ1742_RS18895
uniprot id: A0A375AFR4
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aspartate-semialdehyde dehydrogenase family.
messages: Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS16640
gene id: 1401087:DAQ1742_RS16640
uniprot id: A0A375AFS3
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS02875
gene id: 1401087:DAQ1742_RS02875
uniprot id: A0A375A6N1
names: Similarity
messages: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.

1401087:DAQ1742 RS09120
gene id: 1401087:DAQ1742_RS09120
uniprot id: A0A375AA15
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS01235
gene id: 1401087:DAQ1742_RS01235
uniprot id: A0A375A5S5
names: Similarity
messages: Belongs to the thiolase-like superfamily. Thiolase family.

1401087:DAQ1742 RS14580
gene id: 1401087:DAQ1742_RS14580
uniprot id: A0A375AD49
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: By heat shock.
messages: Cytoplasm
messages: Homohexamer. Organized in a ring with a central cavity.

1401087:DAQ1742 RS17455
gene id: 1401087:DAQ1742_RS17455
uniprot id: A0A375AF18
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 1 family.
messages: Periplasm

1401087:DAQ1742 RS12930
gene id: 1401087:DAQ1742_RS12930
uniprot id: A0A375ACI6
names: Function
names: Similarity
messages: Belongs to the TrhO family.
messages: Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs.

1401087:DAQ1742 RS17285
gene id: 1401087:DAQ1742_RS17285
uniprot id: A0A375AFD5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecA family.
messages: Cell membrane
messages: Cytoplasm
messages: Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
messages: Repressed under conditions of excess protein secretion capacity and derepressed when protein secretion becomes limiting. This is regulated by SecM.

1401087:DAQ1742 RS04735
gene id: 1401087:DAQ1742_RS04735
uniprot id: A0A375A835
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

1401087:DAQ1742 RS09160
gene id: 1401087:DAQ1742_RS09160
uniprot id: A0A375AAK6
names: Similarity
messages: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.

1401087:DAQ1742 RS16515
gene id: 1401087:DAQ1742_RS16515
uniprot id: A0A375AEX9
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

1401087:DAQ1742 RS10230
gene id: 1401087:DAQ1742_RS10230
uniprot id: A0A375AB29
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS15185
gene id: 1401087:DAQ1742_RS15185
uniprot id: A0A375ADN4
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.

1401087:DAQ1742 RS00465
gene id: 1401087:DAQ1742_RS00465
uniprot id: A0A375A5D2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sulfur carrier protein TusA family.
messages: Cytoplasm
messages: Interacts with IscS.
messages: Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin.

1401087:DAQ1742 RS18110
gene id: 1401087:DAQ1742_RS18110
uniprot id: A0A375AFC3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. DIT1 subfamily.
messages: Membrane

1401087:DAQ1742 RS19485
gene id: 1401087:DAQ1742_RS19485
uniprot id: A0A375AGL4
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: Allosterically activated by HslU binding.
messages: Belongs to the peptidase T1B family. HslV subfamily.
messages: Cytoplasm
messages: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.

1401087:DAQ1742 RS09225
gene id: 1401087:DAQ1742_RS09225
uniprot id: A0A375ABI7
names: Function
names: Similarity
messages: Belongs to the peptidase S11 family.
messages: Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.

1401087:DAQ1742 RS06880
gene id: 1401087:DAQ1742_RS06880
uniprot id: A0A375A8W0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane
messages: Membrane

1401087:DAQ1742 RS09310
gene id: 1401087:DAQ1742_RS09310
uniprot id: A0A375AAN1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 3 family.
messages: Periplasm

1401087:DAQ1742 RS11115
gene id: 1401087:DAQ1742_RS11115
uniprot id: A0A375AB88
names: Similarity
messages: Belongs to the iron-sulfur dependent L-serine dehydratase family.

1401087:DAQ1742 RS05560
gene id: 1401087:DAQ1742_RS05560
uniprot id: A0A375A830
names: Similarity
messages: Belongs to the type-I restriction system S methylase family.

1401087:DAQ1742 RS05340
gene id: 1401087:DAQ1742_RS05340
uniprot id: A0A375A871
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer.

1401087:DAQ1742 RS18050
gene id: 1401087:DAQ1742_RS18050
uniprot id: A0A375AFX5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FrdC family.
messages: Cell membrane
messages: Part of an enzyme complex containing four subunits: a flavoprotein (FrdA), an iron-sulfur protein (FrdB), and two hydrophobic anchor proteins (FrdC and FrdD).
messages: Two distinct, membrane-bound, FAD-containing enzymes are responsible for the catalysis of fumarate and succinate interconversion; fumarate reductase is used in anaerobic growth, and succinate dehydrogenase is used in aerobic growth. Anchors the catalytic components of the fumarate reductase complex to the cell inner membrane, binds quinones.

1401087:DAQ1742 RS19135
gene id: 1401087:DAQ1742_RS19135
uniprot id: A0A375AFW3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS10275
gene id: 1401087:DAQ1742_RS10275
uniprot id: A0A375AAT7
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS03235
gene id: 1401087:DAQ1742_RS03235
uniprot id: A0A375A790
names: Similarity
messages: To bacterial alkanal monooxygenase alpha and beta chains.

1401087:DAQ1742 RS06595
gene id: 1401087:DAQ1742_RS06595
uniprot id: A0A375A929
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod.

1401087:DAQ1742 RS07320
gene id: 1401087:DAQ1742_RS07320
uniprot id: A0A375A918
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0299 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS14145
gene id: 1401087:DAQ1742_RS14145
uniprot id: A0A375ADI1
names: Similarity
messages: Belongs to the 5'-nucleotidase family.

1401087:DAQ1742 RS18900
gene id: 1401087:DAQ1742_RS18900
uniprot id: A0A375AFV7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0056 (MarC) family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS06715
gene id: 1401087:DAQ1742_RS06715
uniprot id: A0A375A8T2
names: Similarity
messages: Belongs to the aspartate/glutamate racemases family.

1401087:DAQ1742 RS07425
gene id: 1401087:DAQ1742_RS07425
uniprot id: A0A375A939
names: Function
names: Similarity
messages: Belongs to the MoaB/Mog family.
messages: May be involved in the biosynthesis of molybdopterin.

1401087:DAQ1742 RS17925
gene id: 1401087:DAQ1742_RS17925
uniprot id: A0A375AF82
names: Similarity
messages: To bacterial alkanal monooxygenase alpha and beta chains.

1401087:DAQ1742 RS19510
gene id: 1401087:DAQ1742_RS19510
uniprot id: A0A375AGP7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Membrane

1401087:DAQ1742 RS10050
gene id: 1401087:DAQ1742_RS10050
uniprot id: A0A375AAH7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell inner membrane
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

1401087:DAQ1742 RS10255
gene id: 1401087:DAQ1742_RS10255
uniprot id: A0A375AB57
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thymidine kinase family.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS20340
gene id: 1401087:DAQ1742_RS20340
uniprot id: A0A375AGK0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.

1401087:DAQ1742 RS18835
gene id: 1401087:DAQ1742_RS18835
uniprot id: A0A375AGC5
names: Similarity
messages: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

1401087:DAQ1742 RS10985
gene id: 1401087:DAQ1742_RS10985
uniprot id: A0A375AB64
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS09265
gene id: 1401087:DAQ1742_RS09265
uniprot id: A0A375AAF1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein PotD/PotF family.
messages: Periplasm
messages: Required for the activity of the bacterial periplasmic transport system of putrescine.

1401087:DAQ1742 RS09170
gene id: 1401087:DAQ1742_RS09170
uniprot id: A0A375AA19
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Cell inner membrane

1401087:DAQ1742 RS14825
gene id: 1401087:DAQ1742_RS14825
uniprot id: A0A375AD99
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS16390
gene id: 1401087:DAQ1742_RS16390
uniprot id: A0A375AE75
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

1401087:DAQ1742 RS10240
gene id: 1401087:DAQ1742_RS10240
uniprot id: A0A375AAS0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial solute-binding protein 5 family.
messages: Periplasm

1401087:DAQ1742 RS12570
gene id: 1401087:DAQ1742_RS12570
uniprot id: A0A375AC50
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ZapC family.
messages: Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
messages: Cytoplasm
messages: Interacts directly with FtsZ.

1401087:DAQ1742 RS19070
gene id: 1401087:DAQ1742_RS19070
uniprot id: A0A375AFU8
names: Function
names: Similarity
messages: Belongs to the frataxin family.
messages: Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.

1401087:DAQ1742 RS03565
gene id: 1401087:DAQ1742_RS03565
uniprot id: A0A375A779
names: Similarity
messages: Belongs to the sodium:galactoside symporter (TC 2.A.2) family.

1401087:DAQ1742 RS10890
gene id: 1401087:DAQ1742_RS10890
uniprot id: A0A375ABD1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.
messages: Cytoplasm

1401087:DAQ1742 RS17125
gene id: 1401087:DAQ1742_RS17125
uniprot id: A0A375AF68
names: Similarity
messages: Belongs to the bacterial solute-binding protein 9 family.

1401087:DAQ1742 RS13260
gene id: 1401087:DAQ1742_RS13260
uniprot id: A0A375ACJ9
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dCTP deaminase family.
messages: Catalyzes the deamination of dCTP to dUTP.
messages: Homotrimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS15180
gene id: 1401087:DAQ1742_RS15180
uniprot id: A0A375ADI0
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS00650
gene id: 1401087:DAQ1742_RS00650
uniprot id: A0A375A5L1
names: Subcellular Location Annotation
messages: Cell inner membrane

1401087:DAQ1742 RS01365
gene id: 1401087:DAQ1742_RS01365
uniprot id: A0A375A5Y8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

1401087:DAQ1742 RS02270
gene id: 1401087:DAQ1742_RS02270
uniprot id: A0A375A6G4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
messages: Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.
messages: Cytoplasm
messages: Monomer.
messages: The C-terminal coiled-coil domain is crucial for aminoacylation activity.
messages: ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site.

1401087:DAQ1742 RS01915
gene id: 1401087:DAQ1742_RS01915
uniprot id: A0A375A649
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SIS family. DiaA subfamily.
messages: Homotetramer; dimer of dimers.
messages: Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein.

1401087:DAQ1742 RS03545
gene id: 1401087:DAQ1742_RS03545
uniprot id: A0A375A6Z6
names: Function
names: PTM
names: Similarity
messages: Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
messages: Enables the cell to use acetate during aerobic growth to generate energy via the TCA cycle, and biosynthetic compounds via the glyoxylate shunt. Acetylates CheY, the response regulator involved in flagellar movement and chemotaxis.

1401087:DAQ1742 RS15370
gene id: 1401087:DAQ1742_RS15370
uniprot id: A0A375ADN1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TerC family.
messages: Membrane

1401087:DAQ1742 RS16075
gene id: 1401087:DAQ1742_RS16075
uniprot id: A0A375AE73
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAPS reductase family. CysH subfamily.
messages: Catalyzes the formation of sulfite from phosphoadenosine 5'-phosphosulfate (PAPS) using thioredoxin as an electron donor.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

1401087:DAQ1742 RS19075
gene id: 1401087:DAQ1742_RS19075
uniprot id: A0A375AH45
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adenylyl cyclase class-1 family.
messages: Cytoplasm

1401087:DAQ1742 RS14760
gene id: 1401087:DAQ1742_RS14760
uniprot id: A0A375ADB8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PstS family.
messages: Involved in the system for phosphate transport across the cytoplasmic membrane.
messages: Periplasm
messages: Secreted

1401087:DAQ1742 RS19820
gene id: 1401087:DAQ1742_RS19820
uniprot id: A0A375AG91
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

1401087:DAQ1742 RS18280
gene id: 1401087:DAQ1742_RS18280
uniprot id: A0A375AFF3
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS5 family.
messages: Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.
messages: Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.
messages: The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S4 and S12 plays an important role in translational accuracy.

1401087:DAQ1742 RS18370
gene id: 1401087:DAQ1742_RS18370
uniprot id: A0A375AFG4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

1401087:DAQ1742 RS02750
gene id: 1401087:DAQ1742_RS02750
uniprot id: A0A375A6P7
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial diacylglycerol kinase family.
messages: Catalyzes the ATP-dependent phosphorylation of sn-l,2-diacylglycerol (DAG) to phosphatidic acid. Involved in the recycling of diacylglycerol produced as a by-product during membrane-derived oligosaccharide (MDO) biosynthesis.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Mn(2+), Zn(2+), Cd(2+) and Co(2+) support activity to lesser extents.

1401087:DAQ1742 RS09820
gene id: 1401087:DAQ1742_RS09820
uniprot id: A0A375AAR8
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS16735
gene id: 1401087:DAQ1742_RS16735
uniprot id: A0A375A9C2
names: Similarity
messages: Belongs to the myoviridae tail sheath protein family.

1401087:DAQ1742 RS16445
gene id: 1401087:DAQ1742_RS16445
uniprot id: A0A375AEJ6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
messages: Monomer.
messages: Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.

1401087:DAQ1742 RS17210
gene id: 1401087:DAQ1742_RS17210
uniprot id: A0A375AES3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 3 lipoyl cofactors covalently.
messages: Forms a 24-polypeptide structural core with octahedral symmetry.
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).

1401087:DAQ1742 RS10215
gene id: 1401087:DAQ1742_RS10215
uniprot id: A0A375AAM1
names: Similarity
messages: Belongs to the UPF0263 family.

1401087:DAQ1742 RS01970
gene id: 1401087:DAQ1742_RS01970
uniprot id: A0A375A658
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type II topoisomerase GyrB family.
messages: Belongs to the type II topoisomerase family. ParE type 1 subfamily.
messages: Heterotetramer composed of ParC and ParE.
messages: Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule.

1401087:DAQ1742 RS18325
gene id: 1401087:DAQ1742_RS18325
uniprot id: A0A375AG15
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

1401087:DAQ1742 RS13610
gene id: 1401087:DAQ1742_RS13610
uniprot id: A0A375ACY2
names: Similarity
messages: Belongs to the phosphohexose mutase family.

1401087:DAQ1742 RS09740
gene id: 1401087:DAQ1742_RS09740
uniprot id: A0A375AAT1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LolB family.
messages: Cell outer membrane
messages: Membrane
messages: Monomer.
messages: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.

1401087:DAQ1742 RS14180
gene id: 1401087:DAQ1742_RS14180
uniprot id: A0A375ACX2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaX/STICHEL family.
messages: DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.

1401087:DAQ1742 RS13895
gene id: 1401087:DAQ1742_RS13895
uniprot id: A0A375ACW1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BamC family.
messages: Cell outer membrane
messages: Part of the Bam complex, which is composed of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE.
messages: Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.

1401087:DAQ1742 RS18970
gene id: 1401087:DAQ1742_RS18970
uniprot id: A0A375AFS5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the anaerobic G-3-P dehydrogenase subunit B family.
messages: Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.
messages: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.

1401087:DAQ1742 RS00530
gene id: 1401087:DAQ1742_RS00530
uniprot id: A0A375A5G9
names: Similarity
messages: Belongs to the ABC transporter superfamily.

1401087:DAQ1742 RS05985
gene id: 1401087:DAQ1742_RS05985
uniprot id: A0A375A8A3
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M74 family.
messages: Binds 2 Zn(2+) ions per subunit. Zn(2+) ion 1 is bound in the active site. Zn(2+) ion 2 is bound at the dimer interface by residues from both subunits.
messages: Dimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Murein endopeptidase that cleaves the D-alanyl-meso-2,6-diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus.
messages: Periplasm

1401087:DAQ1742 RS06560
gene id: 1401087:DAQ1742_RS06560
uniprot id: A0A375A8Q1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CheZ family.
messages: Cytoplasm
messages: Homodimer.
messages: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).

1401087:DAQ1742 RS19415
gene id: 1401087:DAQ1742_RS19415
uniprot id: A0A375AGM8
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. TrmA subfamily.
messages: Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).

1401087:DAQ1742 RS10880
gene id: 1401087:DAQ1742_RS10880
uniprot id: A0A375AB76
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS00555
gene id: 1401087:DAQ1742_RS00555
uniprot id: A0A375A5A0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS11380
gene id: 1401087:DAQ1742_RS11380
uniprot id: A0A375ABA3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DsbB family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein.

1401087:DAQ1742 RS04425
gene id: 1401087:DAQ1742_RS04425
uniprot id: A0A375A7N6
names: Function
names: Similarity
messages: Belongs to the class-I DAHP synthase family.
messages: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP).

1401087:DAQ1742 RS05325
gene id: 1401087:DAQ1742_RS05325
uniprot id: A0A375A7T9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LpxH family.
messages: Binds 2 Mn(2+) ions per subunit in a binuclear metal center.
messages: Cell inner membrane
messages: Hydrolyzes the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.

1401087:DAQ1742 RS03245
gene id: 1401087:DAQ1742_RS03245
uniprot id: A0A375A6S4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase U32 family. UbiU subfamily.
messages: Forms an heterodimer with UbiV.
messages: Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiV, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway.

1401087:DAQ1742 RS13250
gene id: 1401087:DAQ1742_RS13250
uniprot id: A0A375ACF3
names: Similarity
messages: Belongs to the UPF0053 family.

1401087:DAQ1742 RS15805
gene id: 1401087:DAQ1742_RS15805
uniprot id: A0A375AF97
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS05695
gene id: 1401087:DAQ1742_RS05695
uniprot id: A0A375A8A5
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS00170
gene id: 1401087:DAQ1742_RS00170
uniprot id: A0A375A5C6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Membrane

1401087:DAQ1742 RS16045
gene id: 1401087:DAQ1742_RS16045
uniprot id: A0A375AFE2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
messages: Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
messages: Homodimer.

1401087:DAQ1742 RS08000
gene id: 1401087:DAQ1742_RS08000
uniprot id: A0A375A9D1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0299 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

1401087:DAQ1742 RS09715
gene id: 1401087:DAQ1742_RS09715
uniprot id: A0A375AAV6
names: Function
names: Similarity
messages: ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.

1401087:DAQ1742 RS09380
gene id: 1401087:DAQ1742_RS09380
uniprot id: A0A375AAA8
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Homodimer.

1401087:DAQ1742 RS01420
gene id: 1401087:DAQ1742_RS01420
uniprot id: A0A375A6Y9
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the thiamine-phosphate synthase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).

1401087:DAQ1742 RS14710
gene id: 1401087:DAQ1742_RS14710
uniprot id: A0A375ADB6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecD/SecF family. SecF subfamily.
messages: Cell membrane
messages: Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.
messages: Membrane
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.

1401087:DAQ1742 RS01610
gene id: 1401087:DAQ1742_RS01610
uniprot id: A0A375A600
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

1401087:DAQ1742 RS17815
gene id: 1401087:DAQ1742_RS17815
uniprot id: A0A375AF41
names: Similarity
messages: Belongs to the prokaryotic GSH synthase family.

1401087:DAQ1742 RS04510
gene id: 1401087:DAQ1742_RS04510
uniprot id: A0A375A7P9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Monomer.
messages: Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.

1401087:DAQ1742 RS03900
gene id: 1401087:DAQ1742_RS03900
uniprot id: A0A375A7N1
names: Similarity
messages: Belongs to the peptidase M16 family.

1401087:DAQ1742 RS09780
gene id: 1401087:DAQ1742_RS09780
uniprot id: A0A375ABV3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PNT beta subunit family.
messages: Cell inner membrane
messages: Heterodimer of an alpha and a beta chain.
messages: Membrane
messages: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.

1401087:DAQ1742 RS18425
gene id: 1401087:DAQ1742_RS18425
uniprot id: A0A375AG33
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS05320
gene id: 1401087:DAQ1742_RS05320
uniprot id: A0A375A854
names: Function
names: Similarity
messages: Belongs to the AIR carboxylase family. Class I subfamily.
messages: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).

1401087:DAQ1742 RS19155
gene id: 1401087:DAQ1742_RS19155
uniprot id: A0A375AFV9
names: Similarity
messages: Belongs to the bacterial solute-binding protein 3 family.

1401087:DAQ1742 RS14670
gene id: 1401087:DAQ1742_RS14670
uniprot id: A0A375AD92
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

1401087:DAQ1742 RS12365
gene id: 1401087:DAQ1742_RS12365
uniprot id: A0A375AC03
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase T family.
messages: Binds two Mg(2+) per subunit. The active form of the enzyme binds two Mg(2+) ions in its active site. The first Mg(2+) forms only one salt bridge with the protein.
messages: Homodimer.
messages: Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.

1401087:DAQ1742 RS11625
gene id: 1401087:DAQ1742_RS11625
uniprot id: A0A375ABQ6
names: Similarity
messages: Belongs to the site-specific recombinase resolvase family.

1401087:DAQ1742 RS03005
gene id: 1401087:DAQ1742_RS03005
uniprot id: A0A375A6Q9
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

1401087:DAQ1742 RS14805
gene id: 1401087:DAQ1742_RS14805
uniprot id: A0A375ADC9
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the shikimate kinase family. AroL subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
messages: Cytoplasm
messages: Monomer.
messages: The LID domain closes over the active site upon ATP binding.

1401087:DAQ1742 RS08055
gene id: 1401087:DAQ1742_RS08055
uniprot id: A0A375A9X4
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

1401087:DAQ1742 RS18245
gene id: 1401087:DAQ1742_RS18245
uniprot id: A0A375AFN4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

1401087:DAQ1742 RS10250
gene id: 1401087:DAQ1742_RS10250
uniprot id: A0A375AAT6
names: Similarity
messages: In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
messages: In the N-terminal section; belongs to the aldehyde dehydrogenase family.

1401087:DAQ1742 RS09630
gene id: 1401087:DAQ1742_RS09630
uniprot id: A0A375AAM6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
messages: Belongs to the KdsB family.
messages: Cytoplasm

1401087:DAQ1742 RS06135
gene id: 1401087:DAQ1742_RS06135
uniprot id: A0A375A8G5
names: Similarity
messages: Belongs to the Nudix hydrolase family.

1401087:DAQ1742 RS14650
gene id: 1401087:DAQ1742_RS14650
uniprot id: A0A375AD60
names: Function
names: Similarity
messages: Belongs to the ketopantoate reductase family.
messages: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.

1401087:DAQ1742 RS02980
gene id: 1401087:DAQ1742_RS02980
uniprot id: A0A375A7X5
names: Similarity
messages: Belongs to the PHP hydrolase family. HisK subfamily.

1401087:DAQ1742 RS06845
gene id: 1401087:DAQ1742_RS06845
uniprot id: A0A375A8W3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. GltP subfamily.
messages: Catalyzes the proton-dependent transport of glutamate and aspartate.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS14720
gene id: 1401087:DAQ1742_RS14720
uniprot id: A0A375ADA1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YajC family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS10040
gene id: 1401087:DAQ1742_RS10040
uniprot id: A0A375AAH3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polysaccharide lyase 4 family.
messages: Secreted

1401087:DAQ1742 RS09175
gene id: 1401087:DAQ1742_RS09175
uniprot id: A0A375ABI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Cell inner membrane

1401087:DAQ1742 RS04335
gene id: 1401087:DAQ1742_RS04335
uniprot id: A0A375A7I6
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
messages: Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.
messages: Cytoplasm
messages: Homotetramer.

1401087:DAQ1742 RS03525
gene id: 1401087:DAQ1742_RS03525
uniprot id: A0A375A753
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.
messages: Membrane

1401087:DAQ1742 RS10450
gene id: 1401087:DAQ1742_RS10450
uniprot id: A0A375AAY7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M23B family.
messages: Membrane

1401087:DAQ1742 RS17460
gene id: 1401087:DAQ1742_RS17460
uniprot id: A0A375AFD9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane
messages: The complex is composed of two ATP-binding proteins (ThiQ), two transmembrane proteins (ThiP) and a solute-binding protein (ThiB).

1401087:DAQ1742 RS13460
gene id: 1401087:DAQ1742_RS13460
uniprot id: A0A375ACV0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ExbB/TolQ family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolR, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

1401087:DAQ1742 RS17565
gene id: 1401087:DAQ1742_RS17565
uniprot id: A0A375AEY3
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the CarB family.
messages: Binds 4 Mg(2+) or Mn(2+) ions per subunit.
messages: Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.

1401087:DAQ1742 RS20290
gene id: 1401087:DAQ1742_RS20290
uniprot id: A0A375AGL9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS05215
gene id: 1401087:DAQ1742_RS05215
uniprot id: A0A375A7R9
names: Function
names: Similarity
messages: Belongs to the methylglyoxal synthase family.
messages: Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.

1401087:DAQ1742 RS13920
gene id: 1401087:DAQ1742_RS13920
uniprot id: A0A375AD15
names: Similarity
messages: Belongs to the ArsC family.

1401087:DAQ1742 RS13485
gene id: 1401087:DAQ1742_RS13485
uniprot id: A0A375ACK3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
messages: Cell inner membrane
messages: Membrane

1401087:DAQ1742 RS04930
gene id: 1401087:DAQ1742_RS04930
uniprot id: A0A375A7L3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
messages: Cytoplasm
messages: Homodimer.

1401087:DAQ1742 RS16630
gene id: 1401087:DAQ1742_RS16630
uniprot id: A0A375AEX1
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS04400
gene id: 1401087:DAQ1742_RS04400
uniprot id: A0A375A7B9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
messages: Belongs to the RimM family.
messages: Binds ribosomal protein uS19.
messages: Cytoplasm
messages: The PRC barrel domain binds ribosomal protein uS19.

1401087:DAQ1742 RS17740
gene id: 1401087:DAQ1742_RS17740
uniprot id: A0A375AFC6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ribose 5-phosphate isomerase family.
messages: Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
messages: Homodimer.

1401087:DAQ1742 RS17390
gene id: 1401087:DAQ1742_RS17390
uniprot id: A0A375AFF9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the acetolactate synthase small subunit family.
messages: Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.
messages: Dimer of large and small chains.

1401087:DAQ1742 RS09165
gene id: 1401087:DAQ1742_RS09165
uniprot id: A0A375AAD5
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

1401087:DAQ1742 RS05400
gene id: 1401087:DAQ1742_RS05400
uniprot id: A0A375A833
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polysaccharide lyase 3 family.
messages: Catalyzes the depolymerization of both polygalacturonate and pectins of methyl esterification degree from 22 to 89%, with an endo mode of action. In contrast to the majority of pectate lyases, displays high activity on highly methylated pectins.
messages: Secreted

1401087:DAQ1742 RS05615
gene id: 1401087:DAQ1742_RS05615
uniprot id: A0A375A878
names: Similarity
messages: Belongs to the YeeT/YkfH/YpjJ family.

1401087:DAQ1742 RS17660
gene id: 1401087:DAQ1742_RS17660
uniprot id: A0A375AF14
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transaldolase family. Type 1 subfamily.
messages: Cytoplasm
messages: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

1401087:DAQ1742 RS07525
gene id: 1401087:DAQ1742_RS07525
uniprot id: A0A375A958
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

1401087:DAQ1742 RS18125
gene id: 1401087:DAQ1742_RS18125
uniprot id: A0A375AFU6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AceK family.
messages: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.
messages: Cytoplasm

1401087:DAQ1742 RS18460
gene id: 1401087:DAQ1742_RS18460
uniprot id: A0A375AFI0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS13815
gene id: 1401087:DAQ1742_RS13815
uniprot id: A0A375ACQ6
names: Similarity
messages: Belongs to the UPF0250 family.

1401087:DAQ1742 RS01780
gene id: 1401087:DAQ1742_RS01780
uniprot id: A0A375A5Y3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptC family.
messages: Cell inner membrane
messages: Component of the lipopolysaccharide transport and assembly complex. Interacts with LptA and the LptBFG transporter complex.
messages: Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
messages: Required for the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane.

1401087:DAQ1742 RS06035
gene id: 1401087:DAQ1742_RS06035
uniprot id: A0A375A8E6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Catalyzes the last two steps in the biosynthesis of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34.
messages: Cytoplasm
messages: In the C-terminal section; belongs to the DAO family.
messages: In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family.

1401087:DAQ1742 RS19445
gene id: 1401087:DAQ1742_RS19445
uniprot id: A0A375AGA6
names: Similarity
messages: Belongs to the methylenetetrahydrofolate reductase family.

1401087:DAQ1742 RS01055
gene id: 1401087:DAQ1742_RS01055
uniprot id: A0A375A5L0
names: Subcellular Location Annotation
messages: Membrane

1401087:DAQ1742 RS04670
gene id: 1401087:DAQ1742_RS04670
uniprot id: A0A375A7S6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dGTPase family. Type 1 subfamily.
messages: Homotetramer.
messages: dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs.

1401087:DAQ1742 RS02575
gene id: 1401087:DAQ1742_RS02575
uniprot id: A0A375A6C9
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. SerB family.

1401087:DAQ1742 RS18755
gene id: 1401087:DAQ1742_RS18755
uniprot id: A0A375AFM7
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HSP33 family.
messages: Cytoplasm
messages: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
messages: Under oxidizing conditions two disulfide bonds are formed involving the reactive cysteines. Under reducing conditions zinc is bound to the reactive cysteines and the protein is inactive.

1401087:DAQ1742 RS05330
gene id: 1401087:DAQ1742_RS05330
uniprot id: A0A375A961
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

1401087:DAQ1742 RS14025
gene id: 1401087:DAQ1742_RS14025
uniprot id: A0A375AD58
names: Similarity
messages: Belongs to the CinA family.

1401087:DAQ1742 RS09485
gene id: 1401087:DAQ1742_RS09485
uniprot id: A0A375AAM7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HisA/HisF family.
messages: Cytoplasm
messages: Heterodimer of HisH and HisF.
messages: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.

1401087:DAQ1742 RS19085
gene id: 1401087:DAQ1742_RS19085
uniprot id: A0A375AFT7
names: Function
names: Similarity
messages: Belongs to the uroporphyrinogen-III synthase family.
messages: Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.

1401087:DAQ1742 RS06240
gene id: 1401087:DAQ1742_RS06240
uniprot id: A0A375A8J2
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4 family.
messages: Composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: Membrane

1401087:DAQ1742 RS19050
gene id: 1401087:DAQ1742_RS19050
uniprot id: A0A375AFT9
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 'phage' integrase family. XerC subfamily.
messages: Cytoplasm
messages: Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD, in which XerC interacts with XerD via its C-terminal region, XerD interacts with XerC via its C-terminal region and so on.
messages: FtsK may regulate the catalytic switch between XerC and XerD in the heterotetrameric complex during the two steps of the recombination process.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifically exchanges the top DNA strands.

1401087:DAQ1742 RS15465
gene id: 1401087:DAQ1742_RS15465
uniprot id: A0A375AE96
names: Function
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.

1401087:DAQ1742 RS02710
gene id: 1401087:DAQ1742_RS02710
uniprot id: A0A375A6F5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
messages: Cell inner membrane
messages: Membrane
messages: Responsible for the transport of C4-dicarboxylates.

1401087:DAQ1742 RS14150
gene id: 1401087:DAQ1742_RS14150
uniprot id: A0A375ACY4
names: Similarity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.

1401087:DAQ1742 RS19115
gene id: 1401087:DAQ1742_RS19115
uniprot id: A0A375AFV4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

1401087:DAQ1742 RS17780
gene id: 1401087:DAQ1742_RS17780
uniprot id: A0A375AF81
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transketolase family.
messages: Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
messages: Homodimer.

1401087:DAQ1742 RS18750
gene id: 1401087:DAQ1742_RS18750
uniprot id: A0A375AFP4
names: Similarity
messages: Belongs to the HSP15 family.

1401087:DAQ1742 RS09720
gene id: 1401087:DAQ1742_RS09720
uniprot id: A0A375AAP7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PTH family.
messages: Cytoplasm
messages: Monomer.
messages: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.

1401087:DAQ1742 RS14155
gene id: 1401087:DAQ1742_RS14155
uniprot id: A0A375ACZ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ferrochelatase family.
messages: Catalyzes the ferrous insertion into protoporphyrin IX.
messages: Cytoplasm

1401087:DAQ1742 RS11125
gene id: 1401087:DAQ1742_RS11125
uniprot id: A0A375ABE2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MntP (TC 9.B.29) family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Probably functions as a manganese efflux pump.

1401087:DAQ1742 RS02585
gene id: 1401087:DAQ1742_RS02585
uniprot id: A0A375A6I2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
messages: Cytoplasm
messages: Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP.

1401087:DAQ1742 RS16580
gene id: 1401087:DAQ1742_RS16580
uniprot id: A0A375AEI5
names: Function
names: Similarity
messages: Belongs to the Dus family. DusA subfamily.
messages: Belongs to the dus family.
messages: Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs.