http://togogenome.org/gene/300852:TTH_RS07310 ^@ http://purl.uniprot.org/uniprot/Q7SIB9 ^@ 12417026 ^@ J. Biochem. ^@ Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling. ^@ Goto M.|||Hayashi H.|||Hirotsu K.|||Kagamiyama H.|||Miyahara I.|||Mizuguchi H.|||Omi R.
http://togogenome.org/gene/300852:TTH_RS01095 ^@ http://purl.uniprot.org/uniprot/Q8VVE2 ^@ 11154066|||11283358|||11511350|||15923259|||16287167 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Heptameric (L12)6/L10 rather than canonical pentameric complexes are found by tandem MS of intact ribosomes from thermophilic bacteria.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Fucini P.|||Gregory S.T.|||Hamburg D.M.|||Ilag L.L.|||Katsani K.R.|||Lieberman K.|||Limbach P.A.|||McKay A.R.|||Nierhaus K.H.|||Noller H.F.|||Robinson C.V.|||Sobott F.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Videler H.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS01725 ^@ http://purl.uniprot.org/uniprot/Q5SLG6 ^@ 21858212 ^@ PLoS ONE|||PLoS One ^@ Properties and crystal structure of methylenetetrahydrofolate reductase from Thermus thermophilus HB8. ^@ Igari S.|||Noguchi K.|||Odaka M.|||Ohtaki A.|||Sato Y.|||Yamada K.|||Yamanaka Y.|||Yohda M.
http://togogenome.org/gene/300852:TTH_RS08580 ^@ http://purl.uniprot.org/uniprot/P17291 ^@ 10476960|||10588692|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||15866174|||16287167|||16377566|||18988853|||20421507|||2362824|||7957245|||9331418 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Mol. Cell|||Nature|||Nucleic Acids Res.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science|||Structure ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly.|||Nucleotide sequence of the Thermus thermophilus HB8 rps12 and rps7 genes coding for the ribosomal proteins S12 and S7.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The small ribosomal subunit from Thermus thermophilus at 4.5 A resolution: pattern fittings and the identification of a functional site.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.|||The structure of ribosomal protein S7 at 1.9-A resolution reveals a beta-hairpin motif that binds double-stranded nucleic acids. ^@ Agmon I.|||Agrawal R.K.|||Auerbach T.|||Avila H.|||Barat C.|||Bartels H.|||Bashan A.|||Baucom A.|||Booth T.M.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Fucini P.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Hansen H.A.|||Harms J.|||Hartsch T.|||Herfurth E.|||Hori-Takemoto C.|||Jacobi C.|||Janell D.|||Jin H.|||Kawazoe M.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Matvienko N.I.|||May J.L.C.|||McCutcheon J.P.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Sharma M.R.|||Shirouzu M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Vorozheykina D.P.|||Weixlbaumer A.|||White S.W.|||Wilson D.N.|||Wimberly B.T.|||Yakhnin A.V.|||Yokoyama S.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS01500 ^@ http://purl.uniprot.org/uniprot/P59846 ^@ 11844799|||12684518 ^@ J. Biol. Chem. ^@ Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.|||Structures of argininosuccinate synthetase in enzyme-ATP substrates and enzyme-AMP product forms: stereochemistry of the catalytic reaction. ^@ Goto M.|||Hirotsu K.|||Miyahara I.|||Nakajima Y.|||Omi R.|||Sugahara M.
http://togogenome.org/gene/300852:TTH_RS03635 ^@ http://purl.uniprot.org/uniprot/P48515 ^@ 9030723 ^@ Eur. J. Biochem. ^@ Identification and purification of translation initiation factor 2 (IF2) from Thermus thermophilus. ^@ Faulhammer H.G.|||Scheible W.R.|||Sprinzl M.|||Vornlocher H.-P.
http://togogenome.org/gene/300852:TTH_RS00225 ^@ http://purl.uniprot.org/uniprot/P60494 ^@ 11154066|||11283358|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS01280 ^@ http://purl.uniprot.org/uniprot/Q5SLP8 ^@ 10476960|||10753109|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agalarov S.C.|||Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Funke P.M.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||May J.L.C.|||McCutcheon J.P.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Prasad G.S.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Stout C.D.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Williamson J.R.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS10385 ^@ http://purl.uniprot.org/uniprot/Q53W83 ^@ 15210349 ^@ J. Mol. Biol. ^@ Structure of Thermus thermophilus 2-Keto-3-deoxygluconate kinase: evidence for recognition of an open chain substrate. ^@ Inagaki E.|||Ohshima N.|||Tahirov T.H.|||Takio K.|||Yasuike K.
http://togogenome.org/gene/300852:TTH_RS06475 ^@ http://purl.uniprot.org/uniprot/Q5SIT7 ^@ 26951669|||28115258|||29311594|||31439765|||32639230 ^@ Elife|||J Struct Biol|||J. Struct. Biol.|||Nat Commun|||Nat. Commun.|||Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A.|||Science ^@ Cryo EM structure of intact rotary H+-ATPase/synthase from Thermus thermophilus.|||Cryo-EM analysis of a domain antibody bound rotary ATPase complex.|||Mechanical inhibition of isolated Vo from V/A-ATPase for proton conductance.|||Mechanical inhibition of isolated Vo from V/A-ATPase for proton conductance. .|||Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.|||Structure and conformational plasticity of the intact Thermus thermophilus V/A-type ATPase.|||Structure and conformational plasticity of the intact Thermus thermophilus V/A-type ATPase. . ^@ Christie M.|||Davies R.B.|||Furuta A.|||Kato T.|||Kishikawa J.I.|||Mitsuoka K.|||Nakanishi A.|||Namba K.|||Rubinstein J.L.|||Sandin S.|||Sazanov L.A.|||Schep D.G.|||Smits C.|||Stewart A.G.|||Stock D.|||Tamakoshi M.|||Wong A.S.|||Wong A.S.W.|||Yokoyama K.|||Zhao J.|||Zhou L.
http://togogenome.org/gene/300852:TTH_RS00505 ^@ http://purl.uniprot.org/uniprot/Q56229 ^@ 9020134 ^@ J. Biol. Chem. ^@ The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Chu S.S.|||Ohnishi T.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS08460 ^@ http://purl.uniprot.org/uniprot/Q5SHQ8 ^@ 18923527 ^@ Nature ^@ Conformational transition of Sec machinery inferred from bacterial SecYE structures. ^@ Dohmae N.|||Fukai S.|||Ishitani R.|||Ito K.|||Mori H.|||Mori T.|||Nureki O.|||Perederina A.|||Sugita Y.|||Tsukazaki T.|||Vassylyev D.G.
http://togogenome.org/gene/300852:TTH_RS07820 ^@ http://purl.uniprot.org/uniprot/Q5SI36 ^@ 18084077 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structure of the minimized alpha/beta-hydrolase fold protein from Thermus thermophilus HB8. ^@ Chen L.|||Ebihara A.|||Kishishita S.|||Kuramitsu S.|||Liu Z.J.|||Manzoku M.|||Murayama K.|||Shirouzu M.|||Takemoto C.|||Uchikubo-Kamo T.|||Wang B.C.|||Xie Y.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09610 ^@ http://purl.uniprot.org/uniprot/Q56213 ^@ 7476196 ^@ Mol. Microbiol. ^@ glmS of Thermus thermophilus HB8: an essential gene for cell-wall synthesis identified immediately upstream of the S-layer gene. ^@ Badet B.|||Badet-Denisot M.-A.|||Berenguer J.|||Fernandez-Herrero L.A.
http://togogenome.org/gene/300852:TTH_RS09030 ^@ http://purl.uniprot.org/uniprot/Q5SHE9 ^@ 15019792 ^@ J. Mol. Biol. ^@ Crystal structure of the GTP-binding protein Obg from Thermus thermophilus HB8. ^@ Inoue M.|||Kukimoto-Niino M.|||Kuramitsu S.|||Murayama K.|||Shirouzu M.|||Tame J.R.|||Terada T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS06730 ^@ http://purl.uniprot.org/uniprot/Q5SIP0 ^@ 15893507 ^@ Biochim. Biophys. Acta ^@ Conserved protein TTHA1554 from Thermus thermophilus HB8 binds to glutamine synthetase and cystathionine beta-lyase. ^@ Arai R.|||Kuramitsu S.|||Nishimoto M.|||Shirouzu M.|||Terada T.|||Toyama M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS10790 ^@ http://purl.uniprot.org/uniprot/Q53W14 ^@ 31980625 ^@ Nat Commun|||Nat. Commun. ^@ Structure and mechanism of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate. ^@ Gloster T.M.|||Graham S.|||McMahon S.A.|||Rambo R.|||White M.F.|||Zhu W.
http://togogenome.org/gene/300852:TTH_RS03700 ^@ http://purl.uniprot.org/uniprot/Q5SKD2 ^@ 10727213|||8319804|||9220965 ^@ Biochemistry|||FEBS Lett. ^@ Existence of two distinct aspartyl-tRNA synthetases in Thermus thermophilus. Structural and biochemical properties of the two enzymes.|||Sequence, overproduction and crystallization of aspartyl-tRNA synthetase from Thermus thermophilus. Implications for the structure of prokaryotic aspartyl-tRNA synthetases.|||Thermus thermophilus contains an eubacterial and an archaebacterial aspartyl-tRNA synthetase. ^@ Becker H.D.|||Blanquet S.|||Giege R.|||Keith G.|||Kern D.|||Kreutzer R.|||Mazauric M.H.|||Mazuric M.-H.|||Moras D.|||Moulinier L.|||Plateau P.|||Poterszman A.|||Reinbolt J.|||Roy H.
http://togogenome.org/gene/300852:TTH_RS01465 ^@ http://purl.uniprot.org/uniprot/Q5SLL5 ^@ 16239727 ^@ Acta Crystallogr. D ^@ Structure of ATP-dependent phosphoenolpyruvate carboxykinase from Thermus thermophilus HB8 showing the structural basis of induced fit and thermostability. ^@ Kunishima N.|||Ohshima N.|||Sugahara M.|||Sugahara M.'|||Ukita Y.
http://togogenome.org/gene/300852:TTH_RS04460 ^@ http://purl.uniprot.org/uniprot/Q5SJY9 ^@ 18039767 ^@ J Bacteriol|||J. Bacteriol. ^@ Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8. ^@ Kuramitsu S.|||Masui R.|||Nakagawa N.|||Wakamatsu T.
http://togogenome.org/gene/300852:TTH_RS08045 ^@ http://purl.uniprot.org/uniprot/Q5SHZ1 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS06490 ^@ http://purl.uniprot.org/uniprot/Q5SIT4 ^@ 16511182 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structures of a putative RNA 5-methyluridine methyltransferase, Thermus thermophilus TTHA1280, and its complex with S-adenosyl-L-homocysteine. ^@ Ebihara A.|||Kuramitsu S.|||Murayama K.|||Nakagawa N.|||Pioszak A.A.|||Shirouzu M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS10565 ^@ http://purl.uniprot.org/uniprot/Q53W51 ^@ 32390413 ^@ J Agric Food Chem|||J. Agric. Food Chem. ^@ Crystal Structure of alpha-Galactosidase from Thermus thermophilus: Insight into Hexamer Assembly and Substrate Specificity.|||Crystal Structure of alpha-Galactosidase from pii>Thermus thermophiluspi/i>: Insight into Hexamer Assembly and Substrate Specificity. ^@ Chang Y.Y.|||Chen S.C.|||Hsu C.H.|||Hwang T.S.|||Lee T.H.|||Wu S.P.
http://togogenome.org/gene/300852:TTH_RS06480 ^@ http://purl.uniprot.org/uniprot/Q5SIT6 ^@ 28115258|||29311594|||31439765|||32639230 ^@ Elife|||J Struct Biol|||J. Struct. Biol.|||Nat Commun|||Nat. Commun.|||Science ^@ Cryo EM structure of intact rotary H+-ATPase/synthase from Thermus thermophilus.|||Cryo-EM analysis of a domain antibody bound rotary ATPase complex.|||Mechanical inhibition of isolated Vo from V/A-ATPase for proton conductance.|||Mechanical inhibition of isolated Vo from V/A-ATPase for proton conductance. .|||Structure and conformational plasticity of the intact Thermus thermophilus V/A-type ATPase.|||Structure and conformational plasticity of the intact Thermus thermophilus V/A-type ATPase. . ^@ Christie M.|||Davies R.B.|||Furuta A.|||Kato T.|||Kishikawa J.I.|||Mitsuoka K.|||Nakanishi A.|||Namba K.|||Sandin S.|||Sazanov L.A.|||Smits C.|||Stewart A.G.|||Stock D.|||Tamakoshi M.|||Wong A.S.|||Wong A.S.W.|||Yokoyama K.|||Zhou L.
http://togogenome.org/gene/300852:TTH_RS03650 ^@ http://purl.uniprot.org/uniprot/Q56425 ^@ 9242984 ^@ Biochimie ^@ Organization of the Thermus thermophilus nusA/infB operon and overexpression of the infB gene in Escherichia coli. ^@ Kreutzer R.|||Sprinzl M.|||Vornlocher H.-P.
http://togogenome.org/gene/300852:TTH_RS07920 ^@ http://purl.uniprot.org/uniprot/Q5SI16 ^@ 18483064|||21531768|||23112169 ^@ J. Biochem.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-pi interactions.|||An O6-methylguanine-DNA methyltransferase-like protein from Thermus thermophilus interacts with a nucleotide excision repair protein.|||An alkyltransferase-like protein from Thermus thermophilus HB8 affects the regulation of gene expression in alkylation response. ^@ Agari Y.|||Blackburn H.|||Connolly B.A.|||Fukui K.|||Grasby J.A.|||Hishinuma H.|||Hunter C.A.|||Kuramitsu S.|||Latypov V.|||Margison G.P.|||Marriott A.|||Masui R.|||McGown G.|||Mega R.|||Millington C.L.|||Morita R.|||Nakagawa N.|||Ohta T.|||Ohyama H.|||Shinkai A.|||Tainer J.A.|||Thorncroft M.|||Tubbs J.L.|||Watson A.J.|||Wilkinson O.J.|||Williams D.M.
http://togogenome.org/gene/300852:TTH_RS05980 ^@ http://purl.uniprot.org/uniprot/Q5SJ35 ^@ 17681011 ^@ FEBS J. ^@ Many fructosamine 3-kinase homologues in bacteria are ribulosamine/erythrulosamine 3-kinases potentially involved in protein deglycation. ^@ Fortpied J.|||Gemayel R.|||Rzem R.|||Van Schaftingen E.|||Veiga-da-Cunha M.|||Vertommen D.
http://togogenome.org/gene/300852:TTH_RS01300 ^@ http://purl.uniprot.org/uniprot/P35872 ^@ 1447157|||15162485 ^@ J. Bacteriol.|||Proteins ^@ Identification of the gene encoding transcription factor NusG of Thermus thermophilus.|||Structural and sequence comparisons arising from the solution structure of the transcription elongation factor NusG from Thermus thermophilus. ^@ Erdmann V.A.|||Hartmann R.K.|||Heinrich T.|||Kuramitsu S.|||Reay P.|||Schroeder W.|||Shirouzu M.|||Terada T.|||Yamasaki K.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01340 ^@ http://purl.uniprot.org/uniprot/Q5SLP1 ^@ 16945939 ^@ J. Biochem. ^@ Crystal structure of TTHA0252 from Thermus thermophilus HB8, a RNA degradation protein of the metallo-beta-lactamase superfamily. ^@ Ishikawa H.|||Kuramitsu S.|||Masui R.|||Nakagawa N.
http://togogenome.org/gene/300852:TTH_RS01530 ^@ http://purl.uniprot.org/uniprot/Q5SLK3 ^@ 19452559 ^@ Proteins ^@ Crystal structure of phenylacetic acid degradation protein PaaG from Thermus thermophilus HB8. ^@ Hisano T.|||Kichise T.|||Miki K.|||Takeda K.
http://togogenome.org/gene/300852:TTH_RS05720 ^@ http://purl.uniprot.org/uniprot/Q76G20 ^@ 15210970 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Crystal structure of elongation factor P from Thermus thermophilus HB8. ^@ Hanawa-Suetsugu K.|||Hori-Takemoto C.|||Kuramitsu S.|||Sakai H.|||Sekine S.|||Shirouzu M.|||Tame J.R.H.|||Terada T.|||Unzai S.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS04440 ^@ http://purl.uniprot.org/uniprot/P43895 ^@ 8617268|||9253415 ^@ Eur. J. Biochem.|||Nat. Struct. Biol. ^@ Crystal structure of the EF-Tu.EF-Ts complex from Thermus thermophilus.|||Elongation factor Ts from Thermus thermophilus -- overproduction in Escherichia coli, quaternary structure and interaction with elongation factor Tu. ^@ Blank J.|||Jiang Y.|||Kreutzer R.|||Meyering-Voss M.|||Nock S.|||Sigler P.B.|||Sprinzl M.|||Wang Y.
http://togogenome.org/gene/300852:TTH_RS10490 ^@ http://purl.uniprot.org/uniprot/Q53W62 ^@ 21502508|||23512413 ^@ Eur. Biophys. J.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Analytical ultracentrifugation studies of oligomerization and DNA-binding of TtCarH, a Thermus thermophilus coenzyme B12-based photosensory regulator.|||Light-dependent gene regulation by a coenzyme B12-based photoreceptor. ^@ Diez A.I.|||Elias-Arnanz M.|||Garcia de la Torre J.|||Murillo F.J.|||Ortega A.|||Ortiz-Guerrero J.M.|||Padmanabhan S.|||Polanco M.C.
http://togogenome.org/gene/300852:TTH_RS06695 ^@ http://purl.uniprot.org/uniprot/Q5SIP7 ^@ 15502308|||24359411 ^@ Acta Crystallogr. D|||Biochemistry ^@ Biochemical and structural analysis of RraA proteins to decipher their relationships with 4-hydroxy-4-methyl-2-oxoglutarate/4-carboxy-4-hydroxy-2-oxoadipate aldolases.|||Structure of the RNA-processing inhibitor RraA from Thermus thermophilis. ^@ Kuroishi C.|||Mazurkewich S.|||Rehse P.H.|||Seah S.Y.|||Tahirov T.H.|||Wang W.
http://togogenome.org/gene/300852:TTH_RS07870 ^@ http://purl.uniprot.org/uniprot/Q5SI26 ^@ 15893507 ^@ Biochim. Biophys. Acta ^@ Conserved protein TTHA1554 from Thermus thermophilus HB8 binds to glutamine synthetase and cystathionine beta-lyase. ^@ Arai R.|||Kuramitsu S.|||Nishimoto M.|||Shirouzu M.|||Terada T.|||Toyama M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01305 ^@ http://purl.uniprot.org/uniprot/P38383 ^@ 1447157|||18923527 ^@ J. Bacteriol.|||Nature ^@ Conformational transition of Sec machinery inferred from bacterial SecYE structures.|||Identification of the gene encoding transcription factor NusG of Thermus thermophilus. ^@ Dohmae N.|||Erdmann V.A.|||Fukai S.|||Hartmann R.K.|||Heinrich T.|||Ishitani R.|||Ito K.|||Mori H.|||Mori T.|||Nureki O.|||Perederina A.|||Schroeder W.|||Sugita Y.|||Tsukazaki T.|||Vassylyev D.G.
http://togogenome.org/gene/300852:TTH_RS06710 ^@ http://purl.uniprot.org/uniprot/Q5SIP4 ^@ 32716419 ^@ Chem Commun (Camb)|||Chem. Commun. (Camb.) ^@ Structural evidence for a reaction intermediate mimic in the active site of a sulfite dehydrogenase. ^@ Abdulkarim S.|||Biaso F.|||Djeghader A.|||Gerbaud G.|||Grimaldi S.|||Nitschke W.|||Rossotti M.|||Schoepp-Cothenet B.|||Soulimane T.
http://togogenome.org/gene/300852:TTH_RS01240 ^@ http://purl.uniprot.org/uniprot/Q5SLQ6 ^@ 16126223 ^@ J Mol Biol|||J. Mol. Biol. ^@ Crystal structure of novel NADP-dependent 3-hydroxyisobutyrate dehydrogenase from Thermus thermophilus HB8. ^@ Kunishima N.|||Kuramitsu S.|||Kuroishi C.|||Lokanath N.K.|||Miyano M.|||Ohshima N.|||Okazaki N.|||Shiromizu I.|||Takio K.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS06050 ^@ http://purl.uniprot.org/uniprot/Q5SJ23 ^@ 32152588 ^@ Nat Microbiol|||Nat. Microbiol. ^@ Structural coordination of polymerization and crosslinking by a SEDS-bPBP peptidoglycan synthase complex. ^@ Bernhardt T.G.|||Brock K.P.|||Erlandson S.C.|||Gilman M.S.A.|||Green A.G.|||Kahne D.|||Kruse A.C.|||Marks D.S.|||Rohs P.D.A.|||Rudner D.Z.|||Sjodt M.|||Taguchi A.|||Walker S.|||Zheng S.
http://togogenome.org/gene/300852:TTH_RS03480 ^@ http://purl.uniprot.org/uniprot/Q5SKH6 ^@ 15983414 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ Structure of a closed-form uroporphyrinogen-III C-methyltransferase from Thermus thermophilus. ^@ Kitao T.|||Rehse P.H.|||Tahirov T.H.
http://togogenome.org/gene/300852:TTH_RS10485 ^@ http://purl.uniprot.org/uniprot/Q53W63 ^@ 22383301 ^@ Proteins ^@ X-ray crystal structure of TTHB099, a CRP/FNR superfamily transcriptional regulator from Thermus thermophilus HB8, reveals a DNA-binding protein with no required allosteric effector molecule. ^@ Agari Y.|||Kuramitsu S.|||Shinkai A.
http://togogenome.org/gene/300852:TTH_RS09295 ^@ http://purl.uniprot.org/uniprot/P74941 ^@ 9207019 ^@ Nucleic Acids Res. ^@ A biologically active 53 kDa fragment of overproduced alanyl-tRNA synthetase from Thermus thermophilus HB8 specifically interacts with tRNA ala acceptor helix. ^@ Kreutzer R.|||Lechler A.|||Limmer S.|||Martin A.|||Zuleeg T.
http://togogenome.org/gene/300852:TTH_RS05760 ^@ http://purl.uniprot.org/uniprot/Q5SJ80 ^@ 10775261|||7657607 ^@ EMBO J.|||J. Biol. Chem. ^@ Molecular genetic and protein chemical characterization of the cytochrome ba3 from Thermus thermophilus HB8.|||Structure and mechanism of the aberrant ba3-cytochrome c oxidase from Thermus thermophilus. ^@ Bartunik H.D.|||Bourenkov G.P.|||Buse G.|||Fee J.A.|||Huber R.|||Keightley J.A.|||Lawrence D.M.|||Mather M.W.|||Pastuszyn A.|||Soulimane T.|||Springer P.|||Than M.E.|||Zimmermann B.H.
http://togogenome.org/gene/300852:TTH_RS06555 ^@ http://purl.uniprot.org/uniprot/Q5SIS0 ^@ 30301898 ^@ Nat Commun|||Nat. Commun. ^@ Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism. ^@ Boegholm N.|||Flygaard R.K.|||Jenner L.B.|||Yusupov M.
http://togogenome.org/gene/300852:TTH_RS08480 ^@ http://purl.uniprot.org/uniprot/Q5SHQ4 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS02775 ^@ http://purl.uniprot.org/uniprot/Q5SKW1 ^@ 12000971|||15109491|||16096056|||16122422|||16167380|||16273103|||18946472|||18957204|||23086998|||24589779|||24755292|||24973216|||25352397|||26941320|||27284196|||27383794|||28652344|||29165680|||31965171|||32127479|||33542236|||34187896|||35082149 ^@ Cell|||Elife|||Genes Dev|||Genes Dev.|||J Biol Chem|||J. Biol. Chem.|||Mol Cell|||Mol. Cell|||Nat Commun|||Nat Struct Mol Biol|||Nat. Commun.|||Nat. Struct. Mol. Biol.|||Nature|||Nucleic Acids Res|||Nucleic Acids Res.|||Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A.|||Protein Sci|||Protein Sci.|||Science ^@ A Thermus phage protein inhibits host RNA polymerase by preventing template DNA strand loading during open promoter complex formation.|||Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.|||Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution.|||GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.|||Inhibition of bacterial RNA polymerase by streptolydigin: stabilization of a straight-bridge-helix active-center conformation.|||Multiplexed protein-DNA cross-linking: Scrunching in transcription start site selection.|||On the validation of crystallographic symmetry and the quality of structures.|||Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in Escherichia coli.|||Promoter-sequence determinants and structural basis of primer-dependent transcription initiation in Escherichia coli. .|||RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.|||Structural and mechanistic basis of reiterative transcription initiation.|||Structural and mechanistic basis of reiterative transcription initiation. .|||Structural basis for promoter specificity switching of RNA polymerase by a phage factor.|||Structural basis for transcription inhibition by tagetitoxin.|||Structural basis for transcription regulation by alarmone ppGpp.|||Structural basis of reiterative transcription from the pyrG and pyrBI promoters by bacterial RNA polymerase.|||Structural basis of transcription activation.|||Structural basis of transcription inhibition by antibiotic streptolydigin.|||Structural basis of transcription initiation by bacterial RNA polymerase holoenzyme.|||Structural basis of transcription initiation.|||The RNA polymerase "switch region" is a target for inhibitors.|||The mechanism of RNA 5 capping with NAD+, NADH and desphospho-CoA.|||The mechanism of RNA 5′ capping with NAD+, NADH and desphospho-CoA.|||The mechanism of the nucleo-sugar selection by multi-subunit RNA polymerases.|||Transcription inactivation through local refolding of the RNA polymerase structure.|||X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway. ^@ Akasaka R.|||Appleman J.R.|||Arnold E.|||Artsimovitch I.|||Barvik I.|||Basu R.S.|||Belogurov G.A.|||Bird J.G.|||Birktoft J.J.|||Borukhov S.|||Buckley B.|||Chatterjee S.|||Clark A.D.|||Clark A.D. Jr.|||Cope A.L.|||Das K.|||Degen D.|||Dharia C.|||Donadio S.|||Ebright K.Y.|||Ebright R.H.|||Ebright Y.W.|||Esyunina D.|||Feng Y.|||Fernandez-Tornero C.|||Firlar E.|||Gourse R.L.|||Greene L.|||Hedglin M.|||Ho M.X.|||Hosaka T.|||Hudson B.|||Igarashi N.|||Irschik H.|||Ismail S.|||Jang M.|||Jansen R.|||Kaelber J.T.|||Kaplan C.D.|||Kashkina E.|||Kinney J.B.|||Klyuyev S.|||Koppstein D.|||Krasny L.|||Kulbachinskiy A.|||Laptenko O.|||Lee J.|||Lee J.K.|||Leroy O.|||Li L.|||Lin W.|||Lira R.|||Liu M.|||Liu Y.|||Maffioli S.|||Makinen J.J.|||Matsugaki N.|||Mekler V.|||Metsa-Ketela M.|||Minakhin L.|||Molodtsov V.|||Mukhopadhyay J.|||Murakami K.S.|||Murayama Y.|||Napoli A.|||Nickels B.E.|||Nikiforov V.|||Nudler E.|||Ochi K.|||Ooi W.Y.|||Panova N.|||Patel J.|||Patlan V.|||Perederina A.|||Pukhrambam C.|||Pupov D.|||Sarafianos S.|||Sarafianos S.G.|||Savkina M.|||Sekine S.|||Sekine S.I.|||Severinov K.|||Sevostyanova A.|||Shah P.|||Shin Y.|||Shirouzu M.|||Sineva E.|||Skalenko K.S.|||Svetlov D.|||Svetlov V.|||Tagami S.|||Tahirov T.H.|||Taylor D.M.|||Temiakov D.|||Tian Y.|||Turnbough C.L.|||Turnbough C.L. Jr.|||Tuske S.|||Vahedian-Movahed H.|||Vassylyev D.G.|||Vassylyeva M.N.|||Vieras E.|||Virta P.|||Vvedenskaya I.O.|||Wakatsuki S.|||Wang J.|||Wang X.|||Warner B.A.|||Webber S.E.|||Winkelman J.T.|||Xiang A.X.|||Yin R.|||Yokoyama S.|||Yu L.|||Zenkin N.|||Zhang Y.|||Zhang Y.'|||Zorov S.
http://togogenome.org/gene/300852:TTH_RS06200 ^@ http://purl.uniprot.org/uniprot/Q5SIZ2 ^@ 27612581 ^@ J Struct Biol|||J. Struct. Biol. ^@ Structures of type IV pilins from Thermus thermophilus demonstrate similarities with type II secretion system pseudopilins. ^@ Derrick J.P.|||Karuppiah V.|||Thistlethwaite A.
http://togogenome.org/gene/300852:TTH_RS04160 ^@ http://purl.uniprot.org/uniprot/Q5SK48 ^@ 24083939 ^@ J. Am. Chem. Soc. ^@ Menaquinone biosynthesis: formation of aminofutalosine requires a unique radical SAM enzyme. ^@ Begley T.P.|||Dairi T.|||Fedoseyenko D.|||Mahanta N.
http://togogenome.org/gene/300852:TTH_RS07410 ^@ http://purl.uniprot.org/uniprot/P80374 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS06455 ^@ http://purl.uniprot.org/uniprot/Q56403 ^@ 10788522|||1836357 ^@ Biochim. Biophys. Acta|||J. Biol. Chem. ^@ Molecular cloning of genes encoding major two subunits of a eubacterial V-type ATPase from Thermus thermophilus.|||V-type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operon. ^@ Date T.|||Denda K.|||Ohkuma S.|||Oshima T.|||Taguchi H.|||Tsutsumi S.|||Wakabayashi T.|||Yasunaga T.|||Yokoyama K.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS00495 ^@ http://purl.uniprot.org/uniprot/Q56227 ^@ 9020134 ^@ J. Biol. Chem. ^@ The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Chu S.S.|||Ohnishi T.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS06855 ^@ http://purl.uniprot.org/uniprot/Q5SIL4 ^@ 11850422|||23804759 ^@ J. Biol. Chem.|||Nucleic Acids Res. ^@ An open conformation of the Thermus thermophilus gyrase B ATP-binding domain.|||Structural insight into negative DNA supercoiling by DNA gyrase, a bacterial type 2A DNA topoisomerase. ^@ Batisse C.|||Helye R.|||Hoermann L.|||Jeltsch J.M.|||Lamour V.|||Menetret J.F.|||Moras D.|||Oudet P.|||Papillon J.|||Potier N.|||Schultz P.
http://togogenome.org/gene/300852:TTH_RS05750 ^@ http://purl.uniprot.org/uniprot/Q5SJ82 ^@ 21847100 ^@ EMBO J|||EMBO J. ^@ Structural analysis of the Ras-like G protein MglA and its cognate GAP MglB and implications for bacterial polarity. ^@ Hot E.|||Keilberg D.|||Koerner C.|||Leonardy S.|||Miertzschke M.|||Sogaard-Andersen L.|||Vetter I.R.|||Wittinghofer A.
http://togogenome.org/gene/300852:TTH_RS08325 ^@ http://purl.uniprot.org/uniprot/Q5SHT5 ^@ 15113836|||17215294|||17686785|||18838375 ^@ J. Biochem.|||J. Biol. Chem.|||Nucleic Acids Res. ^@ Analysis of a nuclease activity of catalytic domain of Thermus thermophilus MutS2 by high-accuracy mass spectrometry.|||Crystal structure of MutS2 endonuclease domain and the mechanism of homologous recombination suppression.|||Nuclease activity of the MutS homologue MutS2 from Thermus thermophilus is confined to the Smr domain.|||Thermus thermophilus MutS2, a MutS paralogue, possesses an endonuclease activity promoted by MutL. ^@ Fukui K.|||Kitamura Y.|||Kosaka H.|||Kuramitsu S.|||Masui R.|||Nakagawa N.|||Nishida Y.|||Takahata Y.
http://togogenome.org/gene/300852:TTH_RS06025 ^@ http://purl.uniprot.org/uniprot/Q5SJ28 ^@ 15388928 ^@ Acta Crystallogr. D ^@ Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability. ^@ Kunishima N.|||Kuramitsu S.|||Lokanath N.K.|||Miyano M.|||Nodake Y.|||Ohshima N.|||Shiromizu I.|||Sugahara M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS02820 ^@ http://purl.uniprot.org/uniprot/Q5SKV2 ^@ 28432121 ^@ J Biol Chem|||J. Biol. Chem. ^@ The Lon protease-like domain in the bacterial RecA paralog RadA is required for DNA binding and repair. ^@ Fujii Y.|||Fukui K.|||Inoue M.|||Kuramitsu S.|||Masui R.|||Nakagawa N.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS08285 ^@ http://purl.uniprot.org/uniprot/Q5SHU3 ^@ 28580926 ^@ Acta Crystallogr F Struct Biol Commun|||Acta Crystallogr. F ^@ Crystal structure of recombinant phosphoribosylpyrophosphate synthetase 2 from Thermus thermophilus HB27 complexed with ADP and sulfate ions. ^@ Esipov R.S.|||Kostromina M.A.|||Kuranova I.P.|||Makarov D.A.|||Mikheeva O.O.|||Muravieva T.I.|||Sinitsyna E.V.|||Timofeev V.I.
http://togogenome.org/gene/300852:TTH_RS02280 ^@ http://purl.uniprot.org/uniprot/P27000 ^@ 11224561|||12554668|||1541262|||17161369|||7701318 ^@ EMBO J.|||Eur. J. Biochem.|||Nat. Struct. Biol.|||Science|||Structure ^@ ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding.|||Architectures of class-defining and specific domains of glutamyl-tRNA synthetase.|||Glutamyl-tRNA synthetase from Thermus thermophilus HB8. Molecular cloning of the gltX gene and crystallization of the overproduced protein.|||Structural bases of transfer RNA-dependent amino acid recognition and activation by glutamyl-tRNA synthetase.|||Structural basis for anticodon recognition by discriminating glutamyl-tRNA synthetase. ^@ Bernier S.|||Chenevert R.|||Dubois D.Y.|||Hara-Yokoyama M.|||Katayanagi K.|||Kigawa T.|||Kohno T.|||Lapointe J.|||Matsuzawa H.|||Miyazawa T.|||Morikawa K.|||Nureki O.|||Ohta T.|||Sekine S.|||Shichiri M.|||Shimada A.|||Shimizu T.|||Suzuki K.|||Vassylyev D.G.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS07245 ^@ http://purl.uniprot.org/uniprot/Q5SIE3 ^@ 17855371 ^@ J. Biol. Chem. ^@ The dodecin from Thermus thermophilus, a bifunctional cofactor storage protein. ^@ Essen L.O.|||Meissner B.|||Schleicher E.|||Weber S.
http://togogenome.org/gene/300852:TTH_RS06245 ^@ http://purl.uniprot.org/uniprot/Q9ZND4 ^@ 9813279 ^@ Gene ^@ The organization of the leuC, leuD and leuB genes of the extreme thermophile, Thermus thermophilus. ^@ Oshima T.|||Tamakoshi M.|||Yamagishi A.
http://togogenome.org/gene/300852:TTH_RS01315 ^@ http://purl.uniprot.org/uniprot/P60339 ^@ 1908798|||27224426 ^@ FEBS Lett.|||PLoS Biol. ^@ Elongation factor Tu prevents misediting of Gly-tRNA(Gly) caused by the design behind the chiral proofreading site of D-aminoacyl-tRNA deacylase.|||Molecular cloning, nucleotide sequence and expression of the tufB gene encoding elongation factor Tu from Thermus thermophilus HB8. ^@ Ahmad S.|||Hakoshima T.|||Kruparani S.P.|||Kumar M.|||Kuncha S.K.|||Kushiro A.|||Pawar K.I.|||Routh S.B.|||Sankaranarayanan R.|||Satoh M.|||Singh S.|||Suma K.|||Tanaka T.|||Tomita K.|||Yadav K.
http://togogenome.org/gene/300852:TTH_RS09040 ^@ http://purl.uniprot.org/uniprot/P60492 ^@ 11154066|||11283358|||15802605|||16287167|||16959973|||18988853|||20421507 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Structure of the 70S ribosome complexed with mRNA and tRNA.|||Translational operator of mRNA on the ribosome: how repressor proteins exclude ribosome binding. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Ehresmann B.|||Ehresmann C.|||Gregory S.T.|||Hamburg D.M.|||Jenner L.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Moras D.|||Murphy F.V. IV|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Rees B.|||Romby P.|||Schulze-Briese C.|||Selmer M.|||Springer M.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weir J.R.|||Weixlbaumer A.|||Yusupov M.|||Yusupov M.M.|||Yusupova G.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS01920 ^@ http://purl.uniprot.org/uniprot/Q5SLC6 ^@ 26515187 ^@ J Biochem|||J. Biochem. ^@ Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus. ^@ Baba S.|||Ebihara A.|||Kanagawa M.|||Kawai G.|||Kuramitsu S.|||Nakagawa N.|||Sampei G.|||Sampei G.I.|||Watanabe Y.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS04280 ^@ http://purl.uniprot.org/uniprot/Q5SK23 ^@ 26936147 ^@ Extremophiles ^@ Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains. ^@ Higuchi Y.|||Iio Y.|||Ishido-Nakai E.|||Kanagawa M.|||Komori H.|||Kuramitsu S.|||Nakabayashi M.|||Nakagawa N.|||Shibata N.|||Ueda Y.
http://togogenome.org/gene/300852:TTH_RS08900 ^@ http://purl.uniprot.org/uniprot/Q5SHH4 ^@ 18338381 ^@ Proteins ^@ Crystal structure of uncharacterized protein TTHA1756 from Thermus thermophilus HB8: Structural variety in UPF0150 family proteins. ^@ Ebihara A.|||Iino H.|||Kanagawa M.|||Kuramitsu S.|||Manzoku M.|||Shinkai A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08535 ^@ http://purl.uniprot.org/uniprot/Q5SHP3 ^@ 11154066|||11283358|||11511350|||16287167|||16377566|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Brodersen D.E.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS10720 ^@ http://purl.uniprot.org/uniprot/Q53W24 ^@ 18560157 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ Nucleant-mediated protein crystallization with the application of microporous synthetic zeolites. ^@ Asada Y.|||Kageyama Y.|||Kunishima N.|||Morikawa Y.|||Sugahara M.
http://togogenome.org/gene/300852:TTH_RS01600 ^@ http://purl.uniprot.org/uniprot/Q5SLI9 ^@ 23027736 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ High-resolution structures of Thermus thermophilus enoyl-acyl carrier protein reductase in the apo form, in complex with NAD+ and in complex with NAD+ and triclosan. ^@ Guardado-Calvo P.|||Llamas-Saiz A.L.|||Noel A.J.|||Otero J.M.|||Pingoud A.|||Schierling B.|||Wende W.|||van Raaij M.J.
http://togogenome.org/gene/300852:TTH_RS04970 ^@ http://purl.uniprot.org/uniprot/Q5SJN0 ^@ 25712767 ^@ J Struct Biol|||J. Struct. Biol. ^@ Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8. ^@ Ichikawa M.|||Iino H.|||Miyazaki T.|||Nishikawa A.|||Tonozuka T.
http://togogenome.org/gene/300852:TTH_RS09670 ^@ http://purl.uniprot.org/uniprot/Q5SH23 ^@ 12963379|||19620981|||23434852 ^@ J. Mol. Biol.|||Nat. Chem. Biol. ^@ Crystal structure of a lysine biosynthesis enzyme, LysX, from Thermus thermophilus HB8.|||Discovery of proteinaceous N-modification in lysine biosynthesis of Thermus thermophilus.|||Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus. ^@ Albers S.V.|||Fujimura T.|||Gotoh K.|||Horie A.|||Kono H.|||Kosono S.|||Kuramitsu S.|||Kuzuyama T.|||Lassak K.|||Masui R.|||Matsuura T.|||Mineki R.|||Nishida H.|||Nishiyama C.|||Nishiyama M.|||Ouchi T.|||Saiki A.|||Sakai H.|||Sekine S.|||Shirouzu M.|||Taka H.|||Takahashi K.|||Terada T.|||Tomita T.|||Vassylyev D.G.|||Vassylyeva M.N.|||Yokoyama S.|||Yoshida A.
http://togogenome.org/gene/300852:TTH_RS05345 ^@ http://purl.uniprot.org/uniprot/Q5SJF8 ^@ 17825835 ^@ J. Mol. Biol. ^@ Crystal structures of shikimate dehydrogenase AroE from Thermus thermophilus HB8 and its cofactor and substrate complexes: insights into the enzymatic mechanism. ^@ Bagautdinov B.|||Kunishima N.
http://togogenome.org/gene/300852:TTH_RS08240 ^@ http://purl.uniprot.org/uniprot/Q5SHV2 ^@ 24419392 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ A novel mode of ferric ion coordination by the periplasmic ferric ion-binding subunit FbpA of an ABC-type iron transporter from Thermus thermophilus HB8. ^@ Horita S.|||Nagata K.|||Ogata M.|||Ohtsuka J.|||Tanokura M.|||Wang S.
http://togogenome.org/gene/300852:TTH_RS01990 ^@ http://purl.uniprot.org/uniprot/Q5SLB4 ^@ 33599038 ^@ FEBS J|||FEBS J. ^@ Structural and thermodynamic insights into the novel dinucleotide-binding protein of ABC transporter unveils its moonlighting function. ^@ Chandravanshi M.|||Kanaujia S.P.|||Samanta R.
http://togogenome.org/gene/300852:TTH_RS06465 ^@ http://purl.uniprot.org/uniprot/P74902 ^@ 10788522 ^@ J. Biol. Chem. ^@ V-type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operon. ^@ Ohkuma S.|||Taguchi H.|||Wakabayashi T.|||Yasunaga T.|||Yokoyama K.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS05305 ^@ http://purl.uniprot.org/uniprot/Q5SJG6 ^@ 11606592|||14712703|||16298991|||16511259|||20057074|||21124318 ^@ Acta Crystallogr. F|||J. Biol. Chem.|||Methods Enzymol.|||Nature ^@ Biochemical assays of Gre factors of Thermus thermophilus.|||Cloning, expression, purification, crystallization and initial crystallographic analysis of transcription elongation factors GreB from Escherichia coli and Gfh1 from Thermus thermophilus.|||Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein.|||Crystallization and preliminary X-ray crystallographic analysis of Thermus thermophilus transcription elongation complex bound to Gfh1.|||Regulation through the RNA polymerase secondary channel. Structural and functional variability of the coiled-coil transcription factors.|||Transcript cleavage by Thermus thermophilus RNA polymerase. Effects of GreA and anti-GreA factors. ^@ Artsimovitch I.|||Berezin I.A.|||Borukhov S.|||Erie D.A.|||Hartsch T.|||Hino N.|||Hogan B.P.|||Kamegamori S.|||Kumarevel T.|||Laptenko O.|||Murayama Y.|||Perederina A.|||Perederina A.A.|||Sakamoto K.|||Sekine S.|||Svetlov V.|||Symersky J.|||Tagami S.|||Vassylyev D.G.|||Vassylyeva M.N.|||Yamamoto M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS03705 ^@ http://purl.uniprot.org/uniprot/P56194 ^@ 9115984 ^@ Biochemistry ^@ Crystal structure analysis of the activation of histidine by Thermus thermophilus histidyl-tRNA synthetase. ^@ Aaberg A.|||Cusack S.|||Rasmussen B.|||Tukalo M.|||Yaremchuk A.
http://togogenome.org/gene/300852:TTH_RS01310 ^@ http://purl.uniprot.org/uniprot/P35871 ^@ 11154066|||11283358|||1447157|||16287167|||18988853|||1908798|||20421507|||8112583 ^@ Biol. Chem.|||FEBS Lett.|||Gene|||J. Bacteriol.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of genes encoding ribosomal protein L33 from Bacillus licheniformis, Thermus thermophilus and Thermotoga maritima.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Identification of the gene encoding transcription factor NusG of Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Molecular cloning, nucleotide sequence and expression of the tufB gene encoding elongation factor Tu from Thermus thermophilus HB8.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Erdmann V.A.|||Gregory S.T.|||Hakoshima T.|||Hamburg D.M.|||Hartmann R.K.|||Heinrich T.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Kushiro A.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Satoh M.|||Schroeder W.|||Sharp P.M.|||Suh M.-J.|||Tanaka T.|||Tomita K.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS10540 ^@ http://purl.uniprot.org/uniprot/Q53W52 ^@ 18693754 ^@ Biochemistry ^@ Crystal structure of type 2 isopentenyl diphosphate isomerase from Thermus thermophilus in complex with inorganic pyrophosphate. ^@ Poulter D.|||Pouyez J.|||Rothman S.C.|||Wouters J.|||de Ruyck J.
http://togogenome.org/gene/300852:TTH_RS02320 ^@ http://purl.uniprot.org/uniprot/P80340 ^@ 11154066|||11283358|||12719542|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ An unusual mechanism of bacterial gene expression revealed for the RNase P protein of Thermus strains.|||Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Feltens R.|||Gossringer M.|||Gregory S.T.|||Hamburg D.M.|||Hartmann R.K.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Willkomm D.K.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS05840 ^@ http://purl.uniprot.org/uniprot/Q5SJ64 ^@ 22306405 ^@ J Mol Biol|||J. Mol. Biol. ^@ The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA. ^@ Ishikawa H.|||Kuramitsu S.|||Masui R.|||Nakagawa N.|||Nakane S.
http://togogenome.org/gene/300852:TTH_RS08550 ^@ http://purl.uniprot.org/uniprot/Q5SHP0 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS11155 ^@ http://purl.uniprot.org/uniprot/Q53VU8 ^@ 24150936 ^@ Nucleic Acids Res|||Nucleic Acids Res. ^@ Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases. ^@ Doudna J.A.|||Jinek M.|||Niewoehner O.
http://togogenome.org/gene/300852:TTH_RS08555 ^@ http://purl.uniprot.org/uniprot/Q5SHN9 ^@ 11154066|||11283358|||11511350|||12946348|||16287167|||18988853|||20421507|||8566766 ^@ Biol. Chem.|||Cell|||Gene|||J. Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Direct linkage of str-, S10- and spc-related gene clusters in Thermus thermophilus HB8, and sequences of ribosomal proteins L4 and S10.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||On the structural and functional importance of the highly conserved Glu56 of Thermus thermophilus L4 ribosomal protein.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Feltens R.|||Gerassimou C.|||Gregory S.T.|||Hamburg D.M.|||Hartmann R.K.|||Jin H.|||Jorcke D.|||Kalpaxis D.L.|||Katsani K.R.|||Kelley A.C.|||Leontiadou F.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Papadopoulos G.|||Petry S.|||Pfeiffer T.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Xaplanteri M.A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS08465 ^@ http://purl.uniprot.org/uniprot/Q5SHQ7 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS08200 ^@ http://purl.uniprot.org/uniprot/Q5SHW0 ^@ 15893507 ^@ Biochim. Biophys. Acta ^@ Conserved protein TTHA1554 from Thermus thermophilus HB8 binds to glutamine synthetase and cystathionine beta-lyase. ^@ Arai R.|||Kuramitsu S.|||Nishimoto M.|||Shirouzu M.|||Terada T.|||Toyama M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS07560 ^@ http://purl.uniprot.org/uniprot/Q5SI81 ^@ 22711535 ^@ J Biol Chem|||J. Biol. Chem. ^@ Identification and characterization of the Thermus thermophilus 5-methylcytidine (m5C) methyltransferase modifying 23 S ribosomal RNA (rRNA) base C1942. ^@ Giessing A.M.|||Jogl G.|||Kirpekar F.|||Larsen L.H.|||Rasmussen A.
http://togogenome.org/gene/300852:TTH_RS05780 ^@ http://purl.uniprot.org/uniprot/Q5SJ76 ^@ 10476960|||10497132|||10753109|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7657607|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Biol. Chem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Identification of an RNA-protein bridge spanning the ribosomal subunit interface.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Molecular genetic and protein chemical characterization of the cytochrome ba3 from Thermus thermophilus HB8.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agalarov S.C.|||Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Culver G.M.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Fee J.A.|||Franceschi F.|||Funke P.M.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Keightley J.A.|||Kelley A.C.|||Lawrence D.M.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Mather M.W.|||May J.L.C.|||McCutcheon J.P.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Pastuszyn A.|||Petry S.|||Pioletti M.|||Prasad G.S.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Springer P.|||Stout C.D.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Williamson J.R.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.|||Zimmermann B.H.
http://togogenome.org/gene/300852:TTH_RS09675 ^@ http://purl.uniprot.org/uniprot/Q5SH22 ^@ 19620981 ^@ Nat. Chem. Biol. ^@ Discovery of proteinaceous N-modification in lysine biosynthesis of Thermus thermophilus. ^@ Fujimura T.|||Horie A.|||Kono H.|||Kuzuyama T.|||Mineki R.|||Nishiyama C.|||Nishiyama M.|||Saiki A.|||Taka H.|||Tomita T.
http://togogenome.org/gene/300852:TTH_RS03420 ^@ http://purl.uniprot.org/uniprot/Q84BQ9 ^@ 15317787|||17215866|||18611379 ^@ EMBO J.|||J. Bacteriol.|||Structure ^@ Multiple-site trimethylation of ribosomal protein L11 by the PrmA methyltransferase.|||Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA.|||Thermus thermophilus L11 methyltransferase, PrmA, is dispensable for growth and preferentially modifies free ribosomal protein L11 prior to ribosome assembly. ^@ Cameron D.M.|||Dahlberg A.E.|||Demirci H.|||Gregory S.T.|||Jogl G.|||Limbach P.A.|||Suh M.-J.|||Thompson J.
http://togogenome.org/gene/300852:TTH_RS09200 ^@ http://purl.uniprot.org/uniprot/Q8RQE8 ^@ 12198314 ^@ Acta Crystallogr. D ^@ Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme from Thermus thermophilus. ^@ Borukhov S.|||Inoue Y.|||Kuramitsu S.|||Laptenko O.|||Lee J.|||Sekine S.I.|||Shibata T.|||Vassylyev D.G.|||Vassylyeva M.N.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09450 ^@ http://purl.uniprot.org/uniprot/Q5SH67 ^@ 22763450 ^@ Nature ^@ Structural insights into electron transfer in caa3-type cytochrome oxidase. ^@ Aragao D.|||Caffrey M.|||Lyons J.A.|||Pisliakov A.V.|||Slattery O.|||Soulimane T.
http://togogenome.org/gene/300852:TTH_RS03685 ^@ http://purl.uniprot.org/uniprot/P54263 ^@ 8706760|||9582288 ^@ EMBO J.|||Eur. J. Biochem. ^@ Asparaginyl-tRNA synthetase from Thermus thermophilus HB8. Sequence of the gene and crystallization of the enzyme expressed in Escherichia coli.|||The crystal structure of asparaginyl-tRNA synthetase from Thermus thermophilus and its complexes with ATP and asparaginyl-adenylate: the mechanism of discrimination between asparagine and aspartic acid. ^@ Berthet-Colominas C.|||Cusack S.|||Grotli M.|||Haertlein M.|||Leberman R.|||Seignovert L.
http://togogenome.org/gene/300852:TTH_RS01945 ^@ http://purl.uniprot.org/uniprot/Q5SLC4 ^@ 18926808 ^@ Chem Biol Interact|||Chem. Biol. Interact. ^@ Biochemical and structural characterization of a short-chain dehydrogenase/reductase of Thermus thermophilus HB8: a hyperthermostable aldose-1-dehydrogenase with broad substrate specificity. ^@ Asada Y.|||Endo S.|||Hara A.|||Inoue Y.|||Kunishima N.|||Mamiya H.|||Matsunaga T.
http://togogenome.org/gene/300852:TTH_RS01595 ^@ http://purl.uniprot.org/uniprot/Q5SLJ0 ^@ 18004771 ^@ Proteins ^@ Crystal structure of TTHA0303 (TT2238), a four-helix bundle protein with an exposed histidine triad from Thermus thermophilus HB8 at 2.0 A. ^@ Asano A.|||Ebihara A.|||Iino H.|||Nagata K.|||Ohtsuka J.|||Takahashi M.|||Tanokura M.
http://togogenome.org/gene/300852:TTH_RS02880 ^@ http://purl.uniprot.org/uniprot/Q5SKU1 ^@ 11154066|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.
http://togogenome.org/gene/300852:TTH_RS07530 ^@ http://purl.uniprot.org/uniprot/Q9RA63 ^@ 10092456|||10377389|||10777521|||11243796|||11741950|||14567920|||14646112|||14741222 ^@ Acta Crystallogr. D|||Cell|||J. Biol. Chem.|||J. Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ A chaperone network for the resolubilization of protein aggregates: direct interaction of ClpB and DnaK.|||Crystallization and preliminary X-ray crystallographic analysis of the Hsp100 protein clpB from Thermus thermophilus.|||Heat-inactivated proteins are rescued by the DnaK/J-GrpE set and ClpB chaperones.|||Heat-inactivated proteins managed by DnaKJ-GrpE-ClpB chaperones are released as a chaperonin-recognizable non-native form.|||Roles of the two ATP binding sites of ClpB from Thermus thermophilus.|||The chaperone function of ClpB from Thermus thermophilus depends on allosteric interactions of its two ATP-binding sites.|||The functional cycle and regulation of the Thermus thermophilus DnaK chaperone system.|||The structure of ClpB: a molecular chaperone that rescues proteins from an aggregated state. ^@ Akhrymuk A.|||Beinker P.|||Chiu W.|||Groemping Y.|||Herde P.|||Hisayoshi M.|||Klostermeier D.|||Lee S.|||Motohashi K.|||Reinstein J.|||Schlee S.|||Seidel R.|||Sigler P.B.|||Sowa M.E.|||Taguchi H.|||Tsai F.T.F.|||Watanabe Y.H.|||Yohda M.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS04175 ^@ http://purl.uniprot.org/uniprot/Q5SK45 ^@ 19714777 ^@ Proteins ^@ Crystal structure of TTHA0807, a CcpA regulator, from Thermus thermophilus HB8. ^@ Kumarevel T.|||Shinkai A.|||Tanaka T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01635 ^@ http://purl.uniprot.org/uniprot/P98005 ^@ 10338009|||8383670 ^@ J. Biol. Chem.|||Protein Sci. ^@ Cytochrome oxidase genes from Thermus thermophilus. Nucleotide sequence of the fused gene and analysis of the deduced primary structures for subunits I and III of cytochrome caa3.|||Evidence for a copper-coordinated histidine-tyrosine cross-link in the active site of cytochrome oxidase. ^@ Blueggel M.|||Buse G.|||Dewor M.|||Fee J.A.|||Hensel S.|||Mather M.W.|||Meyer H.E.|||Soulimane T.|||Springer P.
http://togogenome.org/gene/300852:TTH_RS00635 ^@ http://purl.uniprot.org/uniprot/Q5SM23 ^@ 15866174 ^@ Mol. Cell ^@ Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly. ^@ Agrawal R.K.|||Barat C.|||Booth T.M.|||Fucini P.|||Hori-Takemoto C.|||Kawazoe M.|||Sharma M.R.|||Shirouzu M.|||Wilson D.N.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01145 ^@ http://purl.uniprot.org/uniprot/Q5SLS3 ^@ 20693661 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structures of hypoxanthine-guanine phosphoribosyltransferase (TTHA0220) from Thermus thermophilus HB8. ^@ Baba S.|||Ebihara A.|||Hirotsu K.|||Kanagawa M.|||Kawai G.|||Kim K.|||Kuramitsu S.|||Mega R.|||Sampei G.|||Shinkai A.
http://togogenome.org/gene/300852:TTH_RS01265 ^@ http://purl.uniprot.org/uniprot/Q5SLQ1 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS05735 ^@ http://purl.uniprot.org/uniprot/Q5SJ85 ^@ 15983049 ^@ J. Biol. Chem. ^@ N1-aminopropylagmatine, a new polyamine produced as a key intermediate in polyamine biosynthesis of an extreme thermophile, Thermus thermophilus. ^@ Kawashima E.|||Mitome H.|||Niitsu M.|||Ohnuma M.|||Oshima T.|||Samejima K.|||Tamakoshi M.|||Terui Y.
http://togogenome.org/gene/300852:TTH_RS08445 ^@ http://purl.uniprot.org/uniprot/Q5SHR1 ^@ 11228145|||22515367 ^@ Crit. Rev. Biochem. Mol. Biol.|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Kinetic control of translation initiation in bacteria. ^@ Brodersen D.E.|||Carter A.P.|||Clemons W.M. Jr.|||Hartsch T.|||Milon P.|||Morgan-Warren R.J.|||Ramakrishnan V.|||Rodnina M.V.|||Wimberly B.T.
http://togogenome.org/gene/300852:TTH_RS02545 ^@ http://purl.uniprot.org/uniprot/Q5SL04 ^@ 30423116 ^@ J Biochem|||J. Biochem. ^@ The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form. ^@ Akai S.|||Ikushiro H.|||Kamiya N.|||Miyahara I.|||Sawai T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS09365 ^@ http://purl.uniprot.org/uniprot/Q5SH84 ^@ 19622860 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ Structure of the putative thioesterase protein TTHA1846 from Thermus thermophilus HB8 complexed with coenzyme A and a zinc ion. ^@ Akasaka R.|||Hosaka T.|||Kato-Murayama M.|||Kuramitsu S.|||Murayama K.|||Shirouzu M.|||Terada T.|||Urushibata A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS00930 ^@ http://purl.uniprot.org/uniprot/P03942 ^@ 11681700|||6313685|||7225412 ^@ Biochim. Biophys. Acta|||J. Biol. Chem.|||J. Biol. Inorg. Chem. ^@ New insights into the thermostability of bacterial ferredoxins: high-resolution crystal structure of the seven-iron ferredoxin from Thermus thermophilus.|||Purification, some properties and amino acid sequence of Thermus thermophilus HB8 ferredoxin.|||Studies of the ferredoxin from Thermus thermophilus. ^@ Buse G.|||Fee J.A.|||Hille R.|||Hon-Nami K.|||Huber R.|||Huynh B.H.|||Kent T.A.|||Ludwig M.I.|||Macedo-Ribeiro S.|||Martins B.M.|||Munck E.|||Nakazawa K.|||Oshima T.|||Pereira P.J.|||Sato S.|||Soulimane T.|||Tarr G.E.|||Williams C.H. Jr.|||Yoshida T.
http://togogenome.org/gene/300852:TTH_RS06240 ^@ http://purl.uniprot.org/uniprot/Q9ZND5 ^@ 9813279 ^@ Gene ^@ The organization of the leuC, leuD and leuB genes of the extreme thermophile, Thermus thermophilus. ^@ Oshima T.|||Tamakoshi M.|||Yamagishi A.
http://togogenome.org/gene/300852:TTH_RS08010 ^@ http://purl.uniprot.org/uniprot/Q5SHZ8 ^@ 18071260 ^@ Biosci. Biotechnol. Biochem. ^@ The first thermophilic alpha-oxoamine synthase family enzyme that has activities of 2-amino-3-ketobutyrate CoA ligase and 7-keto-8-aminopelargonic acid synthase: cloning and overexpression of the gene from an extreme thermophile, Thermus thermophilus, and characterization of its gene product. ^@ Izumi Y.|||Kanameda C.|||Kubota T.|||Shimono J.
http://togogenome.org/gene/300852:TTH_RS00885 ^@ http://purl.uniprot.org/uniprot/Q5SLX5 ^@ 23858468|||26349034 ^@ Elife|||Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ CarD uses a minor groove wedge mechanism to stabilize the RNA polymerase open promoter complex.|||Structure and function of CarD, an essential mycobacterial transcription factor. ^@ Bae B.|||Campbell E.A.|||Chen J.|||Darst S.A.|||Davis E.|||Garner A.L.|||Glickman M.S.|||Landick R.|||Leon K.|||Osmundson J.|||Srivastava D.B.|||Stallings C.L.|||Weiss L.A.|||Westblade L.F.
http://togogenome.org/gene/300852:TTH_RS04430 ^@ http://purl.uniprot.org/uniprot/Q9WX76 ^@ 10214965|||11073219 ^@ FEBS Lett.|||RNA ^@ Amber mutations in ribosome recycling factors of Escherichia coli and Thermus thermophilus: evidence for C-terminal modulator element.|||Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch. ^@ Fujiwara T.|||Garber M.B.|||Ito K.|||Kumasaka T.|||Nakamura Y.|||Nakayashiki T.|||Tin O.F.|||Toyoda T.|||Yamamoto M.
http://togogenome.org/gene/300852:TTH_RS01820 ^@ http://purl.uniprot.org/uniprot/Q5SLE7 ^@ 20230833|||27664121|||35184231 ^@ BMC Biol|||BMC Biol.|||Cell Mol Life Sci|||Cell. Mol. Life Sci.|||J Mol Biol|||J. Mol. Biol. ^@ Crystal structure determination and functional characterization of the metallochaperone SlyD from Thermus thermophilus.|||Impact of distant peptide substrate residues on enzymatic activity of SlyD.|||Molecular insights into substrate recognition and catalytic mechanism of the chaperone and FKBP peptidyl-prolyl isomerase SlyD. ^@ Akke M.|||Balbach J.|||Friedrich-Epler B.|||Haupt C.|||Lei J.|||Low C.|||Modig K.|||Neumann P.|||Nordlund P.|||Pazicky S.|||Quistgaard E.M.|||Scholz C.|||Stubbs M.T.|||Tidow H.|||Ural-Blimke Y.|||Weininger U.|||Werle A.A.
http://togogenome.org/gene/300852:TTH_RS04155 ^@ http://purl.uniprot.org/uniprot/Q5SK49 ^@ 24083939 ^@ J. Am. Chem. Soc. ^@ Menaquinone biosynthesis: formation of aminofutalosine requires a unique radical SAM enzyme. ^@ Begley T.P.|||Dairi T.|||Fedoseyenko D.|||Mahanta N.
http://togogenome.org/gene/300852:TTH_RS09080 ^@ http://purl.uniprot.org/uniprot/Q5SHE1 ^@ 20606263 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ Structures of apo and GTP-bound molybdenum cofactor biosynthesis protein MoaC from Thermus thermophilus HB8. ^@ Balasubramaniam S.|||Jeyakanthan J.|||Kanaujia S.P.|||Kuramitsu S.|||Nakagawa N.|||Sekar K.|||Shinkai A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08170 ^@ http://purl.uniprot.org/uniprot/Q5SHW6 ^@ 30640018 ^@ Bioresour Technol|||Bioresour. Technol. ^@ Structural and functional characterization of thermostable biocatalysts for the synthesis of 6-aminopurine nucleoside-5'-monophospate analogues. ^@ Arco J.D.|||Fernandez-Lucas J.|||Kunishima N.|||Matsuura Y.|||Naitow H.|||Perez E.
http://togogenome.org/gene/300852:TTH_RS08525 ^@ http://purl.uniprot.org/uniprot/P60489 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS01290 ^@ http://purl.uniprot.org/uniprot/Q5SLP7 ^@ 11154066|||11283358|||11511350|||1447157|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||J. Bacteriol.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Identification of the gene encoding transcription factor NusG of Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Erdmann V.A.|||Gregory S.T.|||Hamburg D.M.|||Hartmann R.K.|||Heinrich T.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Schroeder W.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS00440 ^@ http://purl.uniprot.org/uniprot/Q56217 ^@ 9020134 ^@ J. Biol. Chem. ^@ The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Chu S.S.|||Ohnishi T.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS05865 ^@ http://purl.uniprot.org/uniprot/Q5SJ58 ^@ 15215603 ^@ Biosci. Biotechnol. Biochem. ^@ Comparative characterization of the oah2 gene homologous to the oah1 of Thermus thermophilus HB8. ^@ Hosokawa H.|||Iwama T.|||Kawai K.|||Lin W.|||Shimizu H.|||Yamagata S.
http://togogenome.org/gene/300852:TTH_RS01795 ^@ http://purl.uniprot.org/uniprot/Q5SLF2 ^@ 21206014 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Crystal structures, dynamics and functional implications of molybdenum-cofactor biosynthesis protein MogA from two thermophilic organisms. ^@ Jeyakanthan J.|||Kanaujia S.P.|||Kuramitsu S.|||Sekar K.|||Shinkai A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09950 ^@ http://purl.uniprot.org/uniprot/Q5SGX1 ^@ 1451792|||1508711|||7664121|||8199244|||9600851 ^@ Biochimie|||FEBS Lett.|||J. Mol. Biol.|||Nat. Struct. Biol.|||Nucleic Acids Res. ^@ Cloning and sequence analysis of the phenylalanyl-tRNA synthetase genes (pheST) from Thermus thermophilus.|||Phenylalanyl-tRNA synthetase from Thermus thermophilus has four antiparallel folds of which only two are catalytically functional.|||Structure of phenylalanyl-tRNA synthetase from Thermus thermophilus.|||Structure of the phenylalanyl-tRNA synthetase genes from Thermus thermophilus HB8 and their expression in Escherichia coli.|||The phenylalanyl-tRNA synthetase specifically binds DNA. ^@ Bobkova E.V.|||Delarue M.|||Goldgur Y.|||Hennecke H.|||Kast P.|||Keller B.|||Kreutzer R.|||Kruft V.|||Lavrik O.J.|||Lechler A.|||Mosyak L.|||Reshetnikova L.|||Safro M.|||Safro M.G.|||Sprinzl M.
http://togogenome.org/gene/300852:TTH_RS07075 ^@ http://purl.uniprot.org/uniprot/P80380 ^@ 10476960|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11530930|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Biol. Chem.|||Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||On the characterization of the putative S20-thx operon of Thermus thermophilus.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Choli-Papadopoulou T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Leontiadou F.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||May J.L.C.|||McCutcheon J.P.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Triantafillidou D.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS07070 ^@ http://purl.uniprot.org/uniprot/Q5SIH3 ^@ 11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11530930|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245|||8357533 ^@ Biol. Chem.|||Biol. Chem. Hoppe-Seyler|||Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Isolation and characterization of a new ribosomal protein from the thermophilic eubacteria, Thermus thermophilus, T. aquaticus and T. flavus.|||On the characterization of the putative S20-thx operon of Thermus thermophilus.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Choli-Papadopoulou T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Jin H.|||Kelley A.C.|||Leontiadou F.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Triantafillidou D.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Wittmann-Liebold B.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS09855 ^@ http://purl.uniprot.org/uniprot/P96077 ^@ 16377566|||9258437 ^@ Biochimie|||Cell ^@ Cloning and overexpression of polypeptide release factor 1 of Thermus thermophilus.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon. ^@ Brodersen D.E.|||Dunham C.M.|||Ito K.|||Kelley A.C.|||Murphy F.V.|||Nakamura Y.|||Petry S.|||Ramakrishnan V.|||Selmer M.|||Tarry M.J.
http://togogenome.org/gene/300852:TTH_RS02905 ^@ http://purl.uniprot.org/uniprot/P61503 ^@ 2038060|||3828357|||4066716 ^@ Biochim. Biophys. Acta|||J. Biol. Chem.|||J. Mol. Biol. ^@ Amino-acid sequence of a tetrameric, manganese superoxide dismutase from Thermus thermophilus HB8.|||Manganese superoxide dismutase from Thermus thermophilus. A structural model refined at 1.8-A resolution.|||The structure of manganese superoxide dismutase from Thermus thermophilus HB8 at 2.4-A resolution. ^@ Ludwig M.L.|||Metzger A.L.|||Nakada Y.|||Nakazawa-Tomizawa K.|||Pattridge K.A.|||Sato S.|||Stallings W.C.|||Strong R.K.
http://togogenome.org/gene/300852:TTH_RS05150 ^@ http://purl.uniprot.org/uniprot/Q5SJJ5 ^@ 16250002 ^@ Proteins ^@ Crystal structure of the hypothetical protein TTHA1013 from Thermus thermophilus HB8. ^@ Bessho Y.|||Hattori M.|||Kuramitsu S.|||Manzoku M.|||Mizohata E.|||Murayama K.|||Shirouzu M.|||Terada T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09035 ^@ http://purl.uniprot.org/uniprot/P60493 ^@ 11154066|||11283358|||15340170|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Protein Sci.|||Proteomics|||Science ^@ Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8.|||Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Kuramitsu S.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Murayama K.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Sakai H.|||Shirouzu M.|||Suh M.-J.|||Takemoto C.H.|||Tatsuguchi A.|||Terada T.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Wang H.|||Weixlbaumer A.|||Yokoyama S.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS06875 ^@ http://purl.uniprot.org/uniprot/Q5SIL0 ^@ 18699868|||21054499 ^@ FEMS Microbiol. Lett.|||Mol. Microbiol. ^@ Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator.|||Identification of novel genes regulated by the oxidative stress-responsive transcriptional activator SdrP in Thermus thermophilus HB8. ^@ Agari Y.|||Kashihara A.|||Kuramitsu S.|||Shinkai A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS05460 ^@ http://purl.uniprot.org/uniprot/Q5SJE1 ^@ 16287167|||18988853|||20421507 ^@ Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Dahlberg A.E.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Kelley A.C.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Voorhees R.M.|||Weixlbaumer A.
http://togogenome.org/gene/300852:TTH_RS08700 ^@ http://purl.uniprot.org/uniprot/Q5SHL3 ^@ 32393900 ^@ Nat Chem Biol|||Nat. Chem. Biol. ^@ A nucleotide-switch mechanism mediates opposing catalytic activities of Rel enzymes. ^@ Garcia-Pino A.|||Hauryliuk V.|||Hendrix J.|||Hofkens J.|||Polikanov Y.|||Scholl D.|||Takada H.|||Talavera A.|||Tamman H.|||Van Nerom K.|||Vandenberk N.
http://togogenome.org/gene/300852:TTH_RS02735 ^@ http://purl.uniprot.org/uniprot/Q5SKW8 ^@ 15791207 ^@ EMBO J. ^@ Structure of P-protein of the glycine cleavage system: implications for nonketotic hyperglycinemia. ^@ Kamiya N.|||Kuramitsu S.|||Maoka N.|||Masui R.|||Nakagawa N.|||Nakai T.
http://togogenome.org/gene/300852:TTH_RS00605 ^@ http://purl.uniprot.org/uniprot/Q5SM28 ^@ 10970866|||11399074|||12013438|||12130657 ^@ EMBO J.|||Extremophiles|||J. Biol. Chem.|||J. Mol. Biol. ^@ A succession of substrate induced conformational changes ensures the amino acid specificity of Thermus thermophilus prolyl-tRNA synthetase: comparison with histidyl-tRNA synthetase.|||Aminoacyl-tRNA formation in the extreme thermophile Thermus thermophilus.|||Crystal structure of a eukaryote/archaeon-like prolyl-tRNA synthetase and its complex with tRNAPro(CGG).|||Cysteine activation is an inherent in vitro property of prolyl-tRNA synthetases. ^@ Ahel I.|||Ambrogelly A.|||Cusack S.|||Feng L.|||Groetli M.|||Hartsch T.|||Mitra A.|||Sauerwald A.|||Soell D.|||Stathopoulos C.|||Toogood H.|||Tukalo M.|||Tumbula-Hansen D.|||Yaremchuk A.
http://togogenome.org/gene/300852:TTH_RS07205 ^@ http://purl.uniprot.org/uniprot/Q5SME3 ^@ 11152119|||2986626 ^@ Biochem. Biophys. Res. Commun.|||Protein Sci. ^@ Amino acid sequence of cytochrome c-552 from Thermus thermophilus HB8.|||Integrity of Thermus thermophilus cytochrome c552 synthesized by Escherichia coli cells expressing the host-specific cytochrome c maturation genes, ccmABCDEFGH: biochemical, spectral, and structural characterization of the recombinant protein. ^@ Ai J.|||Bren K.L.|||Chen Y.|||Ericsson L.H.|||Fee J.A.|||Gomez-Moran E.|||Hill M.G.|||Hon-Nami K.|||Loehr T.M.|||McRee D.E.|||Miyazawa T.|||Patel K.M.|||Sridhar V.|||Stura E.|||Thony-Meyer L.|||Titani K.|||Todaro T.R.|||Williams P.A.
http://togogenome.org/gene/300852:TTH_RS00670 ^@ http://purl.uniprot.org/uniprot/Q5SM16 ^@ 11918670|||15062082|||20053984|||23867454 ^@ Genes Cells|||J. Biol. Chem.|||Structure ^@ Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme.|||Flexible recognition of the tRNA G18 methylation target site by TrmH methyltransferase through first binding and induced fit processes.|||Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: domain structure and conserved amino acid sequence motifs.|||The catalytic domain of topological knot tRNA methyltransferase (TrmH) discriminates between substrate tRNA and nonsubstrate tRNA via an induced-fit process. ^@ Endo Y.|||Fukai S.|||Hirata A.|||Hori H.|||Hou Y.M.|||Inoue Y.|||Ishii R.|||Kuramitsu S.|||Kuwajima K.|||Makabe K.|||Nureki O.|||Ochi A.|||Oshima T.|||Sakaguchi R.|||Shibata T.|||Sugawara K.|||Suzuki T.|||Watanabe K.|||Yamagami R.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS06460 ^@ http://purl.uniprot.org/uniprot/P74903 ^@ 10788522 ^@ J. Biol. Chem. ^@ V-type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operon. ^@ Ohkuma S.|||Taguchi H.|||Wakabayashi T.|||Yasunaga T.|||Yokoyama K.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS00895 ^@ http://purl.uniprot.org/uniprot/P83700 ^@ 12771135 ^@ J. Biol. Chem. ^@ Crystal structure of 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. ^@ Kuramitsu S.|||Kuzuyama T.|||Park S.-Y.|||Satoh S.|||Tame J.R.H.|||Unzai S.|||Wada T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09945 ^@ http://purl.uniprot.org/uniprot/Q5SGX2 ^@ 1451792|||1508711|||7664121|||8199244 ^@ Biochimie|||FEBS Lett.|||Nat. Struct. Biol.|||Nucleic Acids Res. ^@ Cloning and sequence analysis of the phenylalanyl-tRNA synthetase genes (pheST) from Thermus thermophilus.|||Phenylalanyl-tRNA synthetase from Thermus thermophilus has four antiparallel folds of which only two are catalytically functional.|||Structure of phenylalanyl-tRNA synthetase from Thermus thermophilus.|||Structure of the phenylalanyl-tRNA synthetase genes from Thermus thermophilus HB8 and their expression in Escherichia coli. ^@ Bobkova E.V.|||Delarue M.|||Goldgur Y.|||Hennecke H.|||Kast P.|||Keller B.|||Kreutzer R.|||Kruft V.|||Lavrik O.J.|||Mosyak L.|||Reshetnikova L.|||Safro M.|||Safro M.G.|||Sprinzl M.
http://togogenome.org/gene/300852:TTH_RS08020 ^@ http://purl.uniprot.org/uniprot/P29748 ^@ 12654995|||1339363 ^@ Gene|||Nucleic Acids Res. ^@ A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes.|||Cloning and sequencing of genes encoding the TthHB8I restriction and modification enzymes: comparison with the isoschizomeric TaqI enzymes. ^@ Barany F.|||Belfort M.|||Bestor T.|||Bhagwat A.S.|||Bickle T.A.|||Bitinaite J.|||Blumenthal R.M.|||Danzitz M.|||Degtyarev S.K.|||Dryden D.T.|||Dybvig K.|||Firman K.|||Gromova E.S.|||Gumport R.I.|||Halford S.E.|||Hattman S.|||Heitman J.|||Hornby D.P.|||Janulaitis A.|||Jeltsch A.|||Josephsen J.|||Kiss A.|||Klaenhammer T.R.|||Kobayashi I.|||Kong H.|||Krueger D.H.|||Lacks S.|||Marinus M.G.|||Mayer A.|||Miyahara M.|||Morgan R.D.|||Murray N.E.|||Nagaraja V.|||Piekarowicz A.|||Pingoud A.|||Raleigh E.|||Rao D.N.|||Reich N.|||Repin V.E.|||Roberts R.J.|||Selker E.U.|||Shaw P.C.|||Stein D.C.|||Stoddard B.L.|||Szybalski W.|||Trautner T.A.|||Van Etten J.L.|||Vitor J.M.|||Wilson G.G.|||Xu S.Y.|||Zebala J.
http://togogenome.org/gene/300852:TTH_RS02150 ^@ http://purl.uniprot.org/uniprot/Q5SL81 ^@ 17242516 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ Structure of dNTP-inducible dNTP triphosphohydrolase: insight into broad specificity for dNTPs and triphosphohydrolase-type hydrolysis. ^@ Chen L.|||Ebihara A.|||Kondo N.|||Kuramitsu S.|||Liu Z.J.|||Masui R.|||Nakagawa N.|||Wang B.C.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS11175 ^@ http://purl.uniprot.org/uniprot/Q53VU5 ^@ 22212656 ^@ Extremophiles ^@ The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination. ^@ Itaya M.|||Ohtani N.|||Tomita M.
http://togogenome.org/gene/300852:TTH_RS07690 ^@ http://purl.uniprot.org/uniprot/Q5SMH8 ^@ 22232163 ^@ Acta Crystallogr. F ^@ Structure of N-formylglycinamide ribonucleotide amidotransferase II (PurL) from Thermus thermophilus HB8. ^@ Baba S.|||Fuse K.|||Kanagawa M.|||Kawai G.|||Sampei G.|||Suzuki S.|||Tamura S.|||Watanabe Y.|||Yanai H.
http://togogenome.org/gene/300852:TTH_RS05660 ^@ http://purl.uniprot.org/uniprot/Q5SJA1 ^@ 17936781|||22319152 ^@ J. Mol. Biol.|||Mol. Biol. Evol. ^@ Activity, stability and structural studies of lactate dehydrogenases adapted to extreme thermal environments.|||Sampling the conformational energy landscape of a hyperthermophilic protein by engineering key substitutions. ^@ Aleksandrov A.|||Colletier J.P.|||Coquelle N.|||Field M.|||Fioravanti E.|||Madern D.|||Mendoza-Barbera E.|||Mraihi S.|||Vellieux F.|||Weik M.
http://togogenome.org/gene/300852:TTH_RS06990 ^@ http://purl.uniprot.org/uniprot/Q5SII9 ^@ 24218553 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Structure and assembly of an inner membrane platform for initiation of type IV pilus biogenesis. ^@ Collins R.F.|||Derrick J.P.|||Gao Y.|||Karuppiah V.|||Thistlethwaite A.
http://togogenome.org/gene/300852:TTH_RS06980 ^@ http://purl.uniprot.org/uniprot/Q5SIJ1 ^@ 21813504 ^@ J. Biochem. ^@ Structure of Thermus thermophilus homoisocitrate dehydrogenase in complex with a designed inhibitor. ^@ Eguchi T.|||Kumasaka T.|||Nango E.|||Yamamoto T.
http://togogenome.org/gene/300852:TTH_RS04200 ^@ http://purl.uniprot.org/uniprot/Q5SK40 ^@ 20716513 ^@ J Biochem|||J. Biochem. ^@ Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria. ^@ Baba S.|||Ebihara A.|||Fukai Y.|||Ishii T.|||Kanagawa M.|||Kawai G.|||Kawai H.|||Nakagawa N.|||Sampei G.|||Yanai H.
http://togogenome.org/gene/300852:TTH_RS00470 ^@ http://purl.uniprot.org/uniprot/Q56223 ^@ 11704668|||16469879|||16584177|||9020134 ^@ Biochemistry|||J. Biol. Chem.|||Science ^@ Characterization of the iron-sulfur cluster coordinated by a cysteine cluster motif (CXXCXXXCX27C) in the Nqo3 subunit in the proton-translocating NADH-quinone oxidoreductase (NDH-1) of Thermus thermophilus HB-8.|||Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.|||The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Carroll J.|||Chu S.S.|||Hinchliffe P.|||Nakamaru-Ogiso E.|||Ohnishi T.|||Sazanov L.A.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS00435 ^@ http://purl.uniprot.org/uniprot/Q5SM60 ^@ 19285505 ^@ J. Mol. Biol. ^@ Structural rearrangements in the active site of the Thermus thermophilus 16S rRNA methyltransferase KsgA in a binary complex with 5'-methylthioadenosine. ^@ Belardinelli R.|||Dahlberg A.E.|||Demirci H.|||Gregory S.T.|||Gualerzi C.|||Jogl G.|||Seri E.
http://togogenome.org/gene/300852:TTH_RS08510 ^@ http://purl.uniprot.org/uniprot/Q5SHP8 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS10955 ^@ http://purl.uniprot.org/uniprot/Q53VY0 ^@ 18798563 ^@ Proteins ^@ X-ray crystal structure of a CRISPR-associated protein, Cse2, from Thermus thermophilus HB8. ^@ Agari Y.|||Kuramitsu S.|||Shinkai A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS05920 ^@ http://purl.uniprot.org/uniprot/Q5SJ47 ^@ 20129927|||21087930 ^@ J. Biol. Chem. ^@ Role of RecJ-like protein with 5'-3' exonuclease activity in oligo(deoxy)nucleotide degradation.|||Structure of RecJ exonuclease defines its specificity for single-stranded DNA. ^@ Kim K.|||Kitamura Y.|||Kotera Y.|||Kuramitsu S.|||Masui R.|||Nakagawa N.|||Uemura Y.|||Wakamatsu T.
http://togogenome.org/gene/300852:TTH_RS09505 ^@ http://purl.uniprot.org/uniprot/P56881 ^@ 10632708|||8031907 ^@ Biochimie|||Eur. J. Biochem. ^@ Sequence analysis and modular organization of threonyl-tRNA synthetase from Thermus thermophilus and its interrelation with threonyl-tRNA synthetases of other origins.|||Threonyl-tRNA synthetase from Thermus thermophilus: purification and some structural and kinetic properties. ^@ Cura V.|||Ehresmann B.|||Ehresmann C.|||Garber M.|||Kern D.|||Melnikova E.|||Moras D.|||Reinbolt J.|||Zheltonosova J.
http://togogenome.org/gene/300852:TTH_RS07350 ^@ http://purl.uniprot.org/uniprot/Q5SIC2 ^@ 10727213|||12660169|||20717102|||9220965 ^@ Biochemistry|||EMBO J. ^@ Crystal structure of a transfer-ribonucleoprotein particle that promotes asparagine formation.|||Existence of two distinct aspartyl-tRNA synthetases in Thermus thermophilus. Structural and biochemical properties of the two enzymes.|||Non-discriminating and discriminating aspartyl-tRNA synthetases differ in the anticodon-binding domain.|||Thermus thermophilus contains an eubacterial and an archaebacterial aspartyl-tRNA synthetase. ^@ Bailly M.|||Becker H.D.|||Behrens M.A.|||Blaise M.|||Charron C.|||Fischer F.|||Frechin M.|||Giege R.|||Keith G.|||Kern D.|||Kreutzer R.|||Mazauric M.H.|||Moulinier L.|||Oliveira C.L.|||Pedersen J.S.|||Reinbolt J.|||Roy H.|||Thirup S.
http://togogenome.org/gene/300852:TTH_RS00405 ^@ http://purl.uniprot.org/uniprot/Q5SM65 ^@ 24150936 ^@ Nucleic Acids Res|||Nucleic Acids Res. ^@ Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases. ^@ Doudna J.A.|||Jinek M.|||Niewoehner O.
http://togogenome.org/gene/300852:TTH_RS00460 ^@ http://purl.uniprot.org/uniprot/Q56221 ^@ 16469879|||16584177|||9020134 ^@ Biochemistry|||J. Biol. Chem.|||Science ^@ Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.|||The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Carroll J.|||Chu S.S.|||Hinchliffe P.|||Ohnishi T.|||Sazanov L.A.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS02730 ^@ http://purl.uniprot.org/uniprot/Q5SKW9 ^@ 12925792 ^@ Acta Crystallogr. D ^@ Structure of Thermus thermophilus HB8 H-protein of the glycine-cleavage system, resolved by a six-dimensional molecular-replacement method. ^@ Ishijima J.|||Kamiya N.|||Kuramitsu S.|||Masui R.|||Nakai T.
http://togogenome.org/gene/300852:TTH_RS03475 ^@ http://purl.uniprot.org/uniprot/Q5SKH7 ^@ 15065853 ^@ Biochemistry ^@ Crystal structure of a novel zinc-binding ATP sulfurylase from Thermus thermophilus HB8. ^@ Fukuyama K.|||Sugishima M.|||Taguchi Y.
http://togogenome.org/gene/300852:TTH_RS04395 ^@ http://purl.uniprot.org/uniprot/Q5SK01 ^@ 20558545 ^@ RNA ^@ Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus. ^@ Cadambi A.|||Demirci H.|||Gregory S.T.|||Hansen T.|||Jogl G.|||Kirpekar F.|||Larsen L.H.|||Rasmussen A.
http://togogenome.org/gene/300852:TTH_RS08530 ^@ http://purl.uniprot.org/uniprot/P80372 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS00480 ^@ http://purl.uniprot.org/uniprot/Q56224 ^@ 16469879|||16584177|||9020134 ^@ Biochemistry|||J. Biol. Chem.|||Science ^@ Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.|||The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Carroll J.|||Chu S.S.|||Hinchliffe P.|||Ohnishi T.|||Sazanov L.A.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS05260 ^@ http://purl.uniprot.org/uniprot/Q5SJH5 ^@ 17616598 ^@ J. Bacteriol. ^@ Structural characterization of the ribosome maturation protein, RimM. ^@ Kaminishi T.|||Kawazoe M.|||Matsumoto E.|||Muto Y.|||Shirouzu M.|||Suzuki S.|||Takemoto C.|||Tatsuguchi A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09330 ^@ http://purl.uniprot.org/uniprot/Q5SH92 ^@ 16216272 ^@ J Mol Biol|||J. Mol. Biol. ^@ Crystal structure of atypical cytoplasmic ABC-ATPase SufC from Thermus thermophilus HB8. ^@ Kita A.|||Miki K.|||Watanabe S.
http://togogenome.org/gene/300852:TTH_RS04905 ^@ http://purl.uniprot.org/uniprot/Q5SJP3 ^@ 16061252 ^@ J Mol Biol|||J. Mol. Biol. ^@ A novel induced-fit reaction mechanism of asymmetric hot dog thioesterase PAAI. ^@ Asada Y.|||Ishijima J.|||Kunishima N.|||Kuramitsu S.|||Miyano M.|||Nodake Y.|||Sugahara M.|||Sugahara M.'|||Sugahara M.''|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS07135 ^@ http://purl.uniprot.org/uniprot/Q5SIG0 ^@ 29379172 ^@ Nat Struct Mol Biol|||Nat. Struct. Mol. Biol. ^@ Solution structure and elevator mechanism of the membrane electron transporter CcdA. ^@ Bushweller J.H.|||Zhou Y.
http://togogenome.org/gene/300852:TTH_RS08500 ^@ http://purl.uniprot.org/uniprot/Q5SHQ0 ^@ 11154066|||11283358|||11511350|||16287167|||1764514|||18988853|||20421507 ^@ Biochimie|||Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Comparative analysis of ribosomal protein L5 sequences from bacteria of the genus Thermus.|||Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Boeckh T.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Erdmann V.A.|||Gregory S.T.|||Hamburg D.M.|||Hartmann R.K.|||Jahn O.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS01535 ^@ http://purl.uniprot.org/uniprot/Q9F1Q3 ^@ 11245216 ^@ Genes Genet. Syst. ^@ Identification and characterization of Thermus thermophilus HB8 RuvA protein, the subunit of the RuvAB protein complex that promotes branch migration of Holliday junctions. ^@ Ishino Y.|||Iwasaki H.|||Kuramitsu S.|||Nakata A.|||Ohnishi T.|||Shinagawa H.
http://togogenome.org/gene/300852:TTH_RS02830 ^@ http://purl.uniprot.org/uniprot/P56206 ^@ 10064708|||7556056|||9490048 ^@ EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol. ^@ Crystal structure of glycyl-tRNA synthetase from Thermus thermophilus.|||Glycyl-tRNA synthetase from Thermus thermophilus -- wide structural divergence with other prokaryotic glycyl-tRNA synthetases and functional inter-relation with prokaryotic and eukaryotic glycylation systems.|||Glycyl-tRNA synthetase uses a negatively charged pit for specific recognition and activation of glycine. ^@ Arnez J.G.|||Dock-Bregeon A.-C.|||Giege R.|||Keith G.|||Kern D.|||Kreutzer R.|||Logan D.|||Logan D.T.|||Mazauric M.-H.|||Moras D.
http://togogenome.org/gene/300852:TTH_RS09090 ^@ http://purl.uniprot.org/uniprot/Q8RQP5 ^@ 12499535 ^@ Acta Crystallogr. D ^@ Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis. ^@ Kishida H.|||Kuzuyama T.|||Park S.-Y.|||Shirouzu M.|||Takagi M.|||Tame J.R.H.|||Terada T.|||Unzai S.|||Wada T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS04880 ^@ http://purl.uniprot.org/uniprot/Q5SJP8 ^@ 17804419 ^@ J. Biol. Chem. ^@ Crystal structure of the oxygenase component (hpaB) of the 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8. ^@ Ebihara A.|||Hisano T.|||Iwasaki W.|||Kim S.-H.|||Miki K.|||Takeda K.
http://togogenome.org/gene/300852:TTH_RS08545 ^@ http://purl.uniprot.org/uniprot/P60405 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS09360 ^@ http://purl.uniprot.org/uniprot/P05378 ^@ 2844259 ^@ Biochim. Biophys. Acta ^@ Molecular cloning and nucleotide sequence of Thermus thermophilus HB8 trpE and trpG. ^@ Kanaya S.|||Nakada Y.|||Sato S.|||Tanaka T.
http://togogenome.org/gene/300852:TTH_RS09135 ^@ http://purl.uniprot.org/uniprot/Q5SHD1 ^@ 19278648 ^@ Structure ^@ Genetic encoding of 3-iodo-L-tyrosine in Escherichia coli for single-wavelength anomalous dispersion phasing in protein crystallography. ^@ Iraha F.|||Kato-Murayama M.|||Kobayashi T.|||Kuramitsu S.|||Murayama K.|||Ohtake K.|||Oki K.|||Sakamoto K.|||Shirouzu M.|||Takahashi M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS10425 ^@ http://purl.uniprot.org/uniprot/Q53W75 ^@ 24287187 ^@ Protein Eng Des Sel|||Protein Eng. Des. Sel. ^@ Semi-rational approach for converting a GH1 beta-glycosidase into a beta-transglycosidase. ^@ Czjzek M.|||Dion M.|||Hendrickx J.|||Ropartz D.|||Sanejouand Y.H.|||Tellier C.|||Teze D.|||Tran V.
http://togogenome.org/gene/300852:TTH_RS03185 ^@ http://purl.uniprot.org/uniprot/Q5SKN0 ^@ 16680676 ^@ Proteins ^@ Crystal structure of the single-domain rhodanese homologue TTHA0613 from Thermus thermophilus HB8. ^@ Hattori M.|||Kishishita S.|||Kuramitsu S.|||Mizohata E.|||Murayama K.|||Shibata R.|||Shirouzu M.|||Tatsuguchi A.|||Terada T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01270 ^@ http://purl.uniprot.org/uniprot/Q5SLQ0 ^@ 10753109|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||15866174|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Mol. Cell|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agalarov S.C.|||Agmon I.|||Agrawal R.K.|||Auerbach T.|||Avila H.|||Barat C.|||Bartels H.|||Bashan A.|||Baucom A.|||Booth T.M.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Fucini P.|||Funke P.M.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Hori-Takemoto C.|||Jacobi C.|||Janell D.|||Jin H.|||Kawazoe M.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Prasad G.S.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Sharma M.R.|||Shirouzu M.|||Stout C.D.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Williamson J.R.|||Wilson D.N.|||Wimberly B.T.|||Yokoyama S.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS11245 ^@ http://purl.uniprot.org/uniprot/Q53WH9 ^@ 22316175 ^@ Biochemistry ^@ Protein-protein interactions and substrate channeling in orthologous and chimeric aldolase-dehydrogenase complexes. ^@ Baker P.|||Carere J.|||Hillis C.|||Seah S.Y.
http://togogenome.org/gene/300852:TTH_RS10150 ^@ http://purl.uniprot.org/uniprot/Q53WD3 ^@ 18177738 ^@ Biochem. Biophys. Res. Commun. ^@ Crystal structure of the YdjC-family protein TTHB029 from Thermus thermophilus HB8: structural relationship with peptidoglycan N-acetylglucosamine deacetylase. ^@ Ebihara A.|||Iino H.|||Imagawa T.|||Kanagawa M.|||Kuramitsu S.|||Tsuge H.
http://togogenome.org/gene/300852:TTH_RS08015 ^@ http://purl.uniprot.org/uniprot/P29749 ^@ 12654995|||1339363 ^@ Gene|||Nucleic Acids Res. ^@ A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes.|||Cloning and sequencing of genes encoding the TthHB8I restriction and modification enzymes: comparison with the isoschizomeric TaqI enzymes. ^@ Barany F.|||Belfort M.|||Bestor T.|||Bhagwat A.S.|||Bickle T.A.|||Bitinaite J.|||Blumenthal R.M.|||Danzitz M.|||Degtyarev S.K.|||Dryden D.T.|||Dybvig K.|||Firman K.|||Gromova E.S.|||Gumport R.I.|||Halford S.E.|||Hattman S.|||Heitman J.|||Hornby D.P.|||Janulaitis A.|||Jeltsch A.|||Josephsen J.|||Kiss A.|||Klaenhammer T.R.|||Kobayashi I.|||Kong H.|||Krueger D.H.|||Lacks S.|||Marinus M.G.|||Mayer A.|||Miyahara M.|||Morgan R.D.|||Murray N.E.|||Nagaraja V.|||Piekarowicz A.|||Pingoud A.|||Raleigh E.|||Rao D.N.|||Reich N.|||Repin V.E.|||Roberts R.J.|||Selker E.U.|||Shaw P.C.|||Stein D.C.|||Stoddard B.L.|||Szybalski W.|||Trautner T.A.|||Van Etten J.L.|||Vitor J.M.|||Wilson G.G.|||Xu S.Y.|||Zebala J.
http://togogenome.org/gene/300852:TTH_RS07940 ^@ http://purl.uniprot.org/uniprot/Q5SI12 ^@ 18801996|||19602440 ^@ J. Struct. Biol.|||Science ^@ An alternative menaquinone biosynthetic pathway operating in microorganisms.|||Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8. ^@ Arai R.|||Dairi T.|||Furihata K.|||Hiratsuka T.|||Ishikawa J.|||Itoh N.|||Kuramitsu S.|||Murayama K.|||Nishimoto M.|||Seto H.|||Shirouzu M.|||Terada T.|||Toyama M.|||Uchikubo-Kamo T.|||Yamashita H.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS02555 ^@ http://purl.uniprot.org/uniprot/Q5SL02 ^@ 21084312 ^@ J Biol Chem|||J. Biol. Chem. ^@ Product-assisted catalysis as the basis of the reaction specificity of threonine synthase. ^@ Hayashi H.|||Machida Y.|||Murakawa T.
http://togogenome.org/gene/300852:TTH_RS09865 ^@ http://purl.uniprot.org/uniprot/Q5SGY8 ^@ 18758441 ^@ Nat Chem Biol|||Nat. Chem. Biol. ^@ Mechanism of Cu(A) assembly. ^@ Abriata L.A.|||Banci L.|||Bertini I.|||Ciofi-Baffoni S.|||Gkazonis P.|||Spyroulias G.A.|||Vila A.J.|||Wang S.
http://togogenome.org/gene/300852:TTH_RS04520 ^@ http://purl.uniprot.org/uniprot/Q9LCX4 ^@ 10913601 ^@ FEBS Lett. ^@ The heterotrimeric Thermus thermophilus Asp-tRNA(Asn) amidotransferase can also generate Gln-tRNA(Gln). ^@ Becker H.D.|||Jacobi C.|||Kern D.|||Klein S.|||Min B.|||Pelaschier J.|||Raczniak G.|||Roy H.|||Soell D.
http://togogenome.org/gene/300852:TTH_RS00525 ^@ http://purl.uniprot.org/uniprot/Q5SM42 ^@ 21349973 ^@ Microbiology|||Microbiology (Reading) ^@ TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation. ^@ Agari K.|||Agari Y.|||Kuramitsu S.|||Sakamoto K.|||Shinkai A.
http://togogenome.org/gene/300852:TTH_RS10115 ^@ http://purl.uniprot.org/uniprot/Q53WD9 ^@ 22753056 ^@ J Bacteriol|||J. Bacteriol. ^@ Transcriptional repression mediated by a TetR family protein, PfmR, from Thermus thermophilus HB8. ^@ Agari Y.|||Kuramitsu S.|||Sakamoto K.|||Shinkai A.
http://togogenome.org/gene/300852:TTH_RS06470 ^@ http://purl.uniprot.org/uniprot/P74901 ^@ 10788522 ^@ J. Biol. Chem. ^@ V-type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operon. ^@ Ohkuma S.|||Taguchi H.|||Wakabayashi T.|||Yasunaga T.|||Yokoyama K.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS06410 ^@ http://purl.uniprot.org/uniprot/Q5SIV0 ^@ 19241474|||35276293 ^@ Int J Biol Macromol|||Int. J. Biol. Macromol.|||Proteins ^@ Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.|||Crystal structures of TTHA1265 and TTHA1264/TTHA1265 complex reveal an intrinsic heterodimeric assembly. ^@ Ebihara A.|||He J.|||Ichihara Y.|||Nagata K.|||Ohtsuka J.|||Qiu S.|||Ran T.|||Sun B.|||Tanokura M.|||Wang M.|||Wang Q.|||Wang W.|||Xu D.|||Xu M.|||Xu Q.|||Zhang W.
http://togogenome.org/gene/300852:TTH_RS00985 ^@ http://purl.uniprot.org/uniprot/Q5SLV5 ^@ 14501133 ^@ Acta Crystallogr. D ^@ Crystallization and preliminary X-ray diffraction studies of nucleoside diphosphate kinase from Thermus thermophilus HB8. ^@ Kihara M.|||Kuramitsu S.|||Maoka N.|||Masui R.|||Moriguchi M.|||Nakagawa N.|||Takeishi S.
http://togogenome.org/gene/300852:TTH_RS04445 ^@ http://purl.uniprot.org/uniprot/P80371 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||15866174|||16377566|||18988853|||20421507|||7957245|||8617268 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Mol. Cell|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Elongation factor Ts from Thermus thermophilus -- overproduction in Escherichia coli, quaternary structure and interaction with elongation factor Tu.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Agrawal R.K.|||Auerbach T.|||Avila H.|||Barat C.|||Bartels H.|||Bashan A.|||Baucom A.|||Blank J.|||Booth T.M.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Fucini P.|||Gluehmann M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Hori-Takemoto C.|||Jacobi C.|||Janell D.|||Jin H.|||Kawazoe M.|||Kelley A.C.|||Kreutzer R.|||Lieberman K.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Nock S.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Sharma M.R.|||Shirouzu M.|||Sprinzl M.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wilson D.N.|||Wimberly B.T.|||Yokoyama S.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS02215 ^@ http://purl.uniprot.org/uniprot/Q60049 ^@ 1577004|||1577005|||8846223 ^@ Eur. J. Biochem.|||Nat. Struct. Biol. ^@ Crystal structure of NADH oxidase from Thermus thermophilus.|||Molecular cloning and nucleotide sequence of the gene encoding a H2O2-forming NADH oxidase from the extreme thermophilic Thermus thermophilus HB8 and its expression in Escherichia coli.|||Purification and characterization of a NADH oxidase from the thermophile Thermus thermophilus HB8. ^@ Erdmann H.|||Hecht H.J.|||Kondruweit S.|||Kreutzer R.|||Park H.-J.|||Park H.J.|||Reiser C.O.A.|||Schmid R.D.|||Sprinzl M.
http://togogenome.org/gene/300852:TTH_RS10390 ^@ http://purl.uniprot.org/uniprot/Q53W82 ^@ 24699644 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ The first crystal structure of NAD-dependent 3-dehydro-2-deoxy-D-gluconate dehydrogenase from Thermus thermophilus HB8. ^@ Kunishima N.|||Lokanath N.K.|||Pampa K.J.|||Rai R.V.
http://togogenome.org/gene/300852:TTH_RS00450 ^@ http://purl.uniprot.org/uniprot/Q56219 ^@ 16469879|||16584177|||9020134 ^@ Biochemistry|||J. Biol. Chem.|||Science ^@ Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.|||The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Carroll J.|||Chu S.S.|||Hinchliffe P.|||Ohnishi T.|||Sazanov L.A.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS09240 ^@ http://purl.uniprot.org/uniprot/Q5SHB0 ^@ 25313401 ^@ J Biol Chem|||J. Biol. Chem. ^@ Structure and mechanism of the bifunctional CinA enzyme from Thermus thermophilus. ^@ Dajani R.|||Derrick J.P.|||Karuppiah V.|||Thistlethwaite A.|||Warwicker J.
http://togogenome.org/gene/300852:TTH_RS06345 ^@ http://purl.uniprot.org/uniprot/Q5SIW3 ^@ 17059823|||18923527 ^@ J. Mol. Biol.|||Nature ^@ Conformational transition of Sec machinery inferred from bacterial SecYE structures.|||Crystal structure of the translocation ATPase SecA from Thermus thermophilus reveals a parallel, head-to-head dimer. ^@ Dohmae N.|||Fukai S.|||Ishitani R.|||Ito K.|||Kimura Y.|||Mori H.|||Mori T.|||Nureki O.|||Perederina A.|||Sugita Y.|||Tahirov T.H.|||Tsukazaki T.|||Vassylyev D.G.|||Vassylyeva M.N.
http://togogenome.org/gene/300852:TTH_RS08540 ^@ http://purl.uniprot.org/uniprot/Q5SHP2 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS08420 ^@ http://purl.uniprot.org/uniprot/Q5SHR6 ^@ 9880810 ^@ J. Biochem. ^@ Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein. ^@ Kuramitsu S.|||Kyogoku Y.|||Wada T.|||Yamazaki T.
http://togogenome.org/gene/300852:TTH_RS00445 ^@ http://purl.uniprot.org/uniprot/Q56218 ^@ 16469879|||16584177|||9020134 ^@ Biochemistry|||J. Biol. Chem.|||Science ^@ Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.|||The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Carroll J.|||Chu S.S.|||Hinchliffe P.|||Ohnishi T.|||Sazanov L.A.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS04730 ^@ http://purl.uniprot.org/uniprot/Q5SJS9 ^@ 14684898 ^@ Acta Crystallogr. D ^@ Structure and implications for the thermal stability of phosphopantetheine adenylyltransferase from Thermus thermophilus. ^@ Arisaka F.|||Fujimoto Y.|||Inagaki E.|||Kuramitsu S.|||Kuroishi C.|||Miyano M.|||Nakamura Y.|||Nodake Y.|||Tahirov T.H.|||Takahashi H.|||Yamamoto M.|||Yokoyama S.|||Yutani K.
http://togogenome.org/gene/300852:TTH_RS07540 ^@ http://purl.uniprot.org/uniprot/Q56237 ^@ 10092456|||9276481|||9349721 ^@ Biochim. Biophys. Acta|||FEBS Lett.|||J. Mol. Biol. ^@ Cloning, sequencing, and expression of dnaK-operon proteins from the thermophilic bacterium Thermus thermophilus.|||K+ is an indispensable cofactor for GrpE stimulation of ATPase activity of DnaK/DnaJ complex from Thermus thermophilus.|||The functional cycle and regulation of the Thermus thermophilus DnaK chaperone system. ^@ Joachimiak A.|||Klostermeier D.|||Motohashi K.|||Odaka M.|||Osipiuk J.|||Reinstein J.|||Seidel R.|||Yohda M.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS05745 ^@ http://purl.uniprot.org/uniprot/Q5SJ83 ^@ 21847100 ^@ EMBO J|||EMBO J. ^@ Structural analysis of the Ras-like G protein MglA and its cognate GAP MglB and implications for bacterial polarity. ^@ Hot E.|||Keilberg D.|||Koerner C.|||Leonardy S.|||Miertzschke M.|||Sogaard-Andersen L.|||Vetter I.R.|||Wittinghofer A.
http://togogenome.org/gene/300852:TTH_RS10640 ^@ http://purl.uniprot.org/uniprot/Q5SIU5 ^@ 22212656 ^@ Extremophiles ^@ The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination. ^@ Itaya M.|||Ohtani N.|||Tomita M.
http://togogenome.org/gene/300852:TTH_RS04670 ^@ http://purl.uniprot.org/uniprot/P09403 ^@ 3052437 ^@ Biochem. J. ^@ Nucleotide sequence of the phosphoglycerate kinase gene from the extreme thermophile Thermus thermophilus. Comparison of the deduced amino acid sequence with that of the mesophilic yeast phosphoglycerate kinase. ^@ Bowen D.|||Fothergill J.E.|||Hall L.|||Littlechild J.A.|||Watson H.C.
http://togogenome.org/gene/300852:TTH_RS07415 ^@ http://purl.uniprot.org/uniprot/P60488 ^@ 11154066|||11283358|||11511350|||16287167|||16377566|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Brodersen D.E.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS01090 ^@ http://purl.uniprot.org/uniprot/Q8VVE3 ^@ 11154066|||15923259|||16287167 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics ^@ Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Heptameric (L12)6/L10 rather than canonical pentameric complexes are found by tandem MS of intact ribosomes from thermophilic bacteria.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus. ^@ Anagnostopoulos K.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Fucini P.|||Gregory S.T.|||Hamburg D.M.|||Ilag L.L.|||Katsani K.R.|||Limbach P.A.|||McKay A.R.|||Nierhaus K.H.|||Robinson C.V.|||Sobott F.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Videler H.
http://togogenome.org/gene/300852:TTH_RS10325 ^@ http://purl.uniprot.org/uniprot/Q53W95 ^@ 33781823 ^@ Biochim Biophys Acta Gen Subj ^@ Dynamic cross correlation analysis of Thermus thermophilus alkaline phosphatase and determinants of thermostability. ^@ Borges B.|||Coelho C.|||Gallo G.|||Hardy L.|||Maiello F.|||Negri N.|||Wurtele M.
http://togogenome.org/gene/300852:TTH_RS02135 ^@ http://purl.uniprot.org/uniprot/Q5SL84 ^@ 18618709 ^@ Proteins ^@ Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8. ^@ Ishikawa H.|||Kuramitsu S.|||Masui R.|||Morita R.|||Nakagawa N.
http://togogenome.org/gene/300852:TTH_RS08565 ^@ http://purl.uniprot.org/uniprot/Q5SHN7 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245|||8566766 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||Gene|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Direct linkage of str-, S10- and spc-related gene clusters in Thermus thermophilus HB8, and sequences of ribosomal proteins L4 and S10.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Feltens R.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartmann R.K.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Jorcke D.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pfeiffer T.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS08595 ^@ http://purl.uniprot.org/uniprot/Q5SHN1 ^@ 22061265 ^@ J Mol Biol|||J. Mol. Biol. ^@ Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope. ^@ Adachi Y.|||Azoitei M.L.|||Baker D.|||Ban Y.E.|||Bryson S.|||Julien J.P.|||Kalyuzhniy O.|||Pai E.F.|||Porter J.R.|||Schief W.R.|||Schroeter A.
http://togogenome.org/gene/300852:TTH_RS05850 ^@ http://purl.uniprot.org/uniprot/P42778 ^@ 16242715|||9362117 ^@ Biosci. Biotechnol. Biochem.|||J. Mol. Biol. ^@ Cloning of genes of the aminopeptidase T family from Thermus thermophilus HB8 and Bacillus stearothermophilus NCIB8924: apparent similarity to the leucyl aminopeptidase family.|||Substrate access to the active sites in aminopeptidase T, a representative of a new metallopeptidase clan. ^@ Bochtler M.|||Bourenkov G.|||Kaminogawa S.|||Minagawa E.|||Motoshima H.|||Odintsov S.G.|||Rybin V.|||Sabala I.|||Tsukasaki F.
http://togogenome.org/gene/300852:TTH_RS08490 ^@ http://purl.uniprot.org/uniprot/P0DOY9 ^@ 10476960|||10836793|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||RNA|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Culver G.M.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lancaster L.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||May J.L.C.|||McCutcheon J.P.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS07735 ^@ http://purl.uniprot.org/uniprot/Q5SI52 ^@ 23417064|||32811817 ^@ Nat Commun|||Nat. Commun.|||Nature ^@ Crystal structure of the entire respiratory complex I.|||Key role of quinone in the mechanism of respiratory complex I. ^@ Baradaran R.|||Berrisford J.M.|||Gallagher D.T.|||Gutierrez-Fernandez J.|||Kaszuba K.|||Minhas G.S.|||Sazanov L.A.|||Tambalo M.
http://togogenome.org/gene/300852:TTH_RS02865 ^@ http://purl.uniprot.org/uniprot/Q5SKU4 ^@ 30248426 ^@ Int J Biol Macromol|||Int. J. Biol. Macromol. ^@ Structural and functional analysis of Glutaminyl-tRNA synthetase (TtGlnRS) from Thermus thermophilus HB8 and its complexes. ^@ Jain V.|||Jeyakanthan J.|||Nachiappan M.|||Sharma A.|||Yogavel M.
http://togogenome.org/gene/300852:TTH_RS00475 ^@ http://purl.uniprot.org/uniprot/Q60019 ^@ 9020134 ^@ J. Biol. Chem. ^@ The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Chu S.S.|||Ohnishi T.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS04710 ^@ http://purl.uniprot.org/uniprot/Q56416 ^@ 15526298|||2176725 ^@ Plasmid|||Proteins ^@ ATP-induced structural change of dephosphocoenzyme A kinase from Thermus thermophilus HB8.|||Cloning and sequence of IS1000, a putative insertion sequence from Thermus thermophilus HB8. ^@ Ashby M.K.|||Bergquist P.L.|||Ebihara A.|||Kuramitsu S.|||Murayama K.|||Nakagawa N.|||Seto A.|||Shirouzu M.|||Toyama M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS06195 ^@ http://purl.uniprot.org/uniprot/Q5SIZ3 ^@ 24218553 ^@ Proc Natl Acad Sci U S A|||Proc. Natl. Acad. Sci. U.S.A. ^@ Structure and assembly of an inner membrane platform for initiation of type IV pilus biogenesis. ^@ Collins R.F.|||Derrick J.P.|||Gao Y.|||Karuppiah V.|||Thistlethwaite A.
http://togogenome.org/gene/300852:TTH_RS04435 ^@ http://purl.uniprot.org/uniprot/P43891 ^@ 8617268 ^@ Eur. J. Biochem. ^@ Elongation factor Ts from Thermus thermophilus -- overproduction in Escherichia coli, quaternary structure and interaction with elongation factor Tu. ^@ Blank J.|||Kreutzer R.|||Nock S.|||Sprinzl M.
http://togogenome.org/gene/300852:TTH_RS02740 ^@ http://purl.uniprot.org/uniprot/Q5SKW7 ^@ 15791207 ^@ EMBO J. ^@ Structure of P-protein of the glycine cleavage system: implications for nonketotic hyperglycinemia. ^@ Kamiya N.|||Kuramitsu S.|||Maoka N.|||Masui R.|||Nakagawa N.|||Nakai T.
http://togogenome.org/gene/300852:TTH_RS08520 ^@ http://purl.uniprot.org/uniprot/Q5SHP6 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507|||9825301 ^@ Biol. Chem.|||Cell|||J. Biochem. Biophys. Methods|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Systematic, computer-assisted optimisation of the isolation of Thermus thermophilus 50S ribosomal proteins by reversed-phase high-performance liquid chromatography.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Boysen R.I.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Erdmann V.A.|||Gregory S.T.|||Hamburg D.M.|||Hearn M.T.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS02750 ^@ http://purl.uniprot.org/uniprot/Q5SKW5 ^@ 26979298 ^@ Biochemistry ^@ ADP-Ribose Pyrophosphatase Reaction in Crystalline State Conducted by Consecutive Binding of Two Manganese(II) Ions as Cofactors. ^@ Akita Y.|||Furuike Y.|||Kamiya N.|||Miyahara I.
http://togogenome.org/gene/300852:TTH_RS08430 ^@ http://purl.uniprot.org/uniprot/P80376 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||15866174|||16287167|||16377566|||18988853|||20421507|||7957245|||9880810 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Biochem.|||J. Mol. Biol.|||Mol. Cell|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein.|||Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Agrawal R.K.|||Auerbach T.|||Avila H.|||Barat C.|||Bartels H.|||Bashan A.|||Baucom A.|||Booth T.M.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Fucini P.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Hori-Takemoto C.|||Jacobi C.|||Janell D.|||Jin H.|||Kawazoe M.|||Kelley A.C.|||Kuramitsu S.|||Kyogoku Y.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Sharma M.R.|||Shirouzu M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Wada T.|||Weixlbaumer A.|||Wilson D.N.|||Wimberly B.T.|||Yamazaki T.|||Yokoyama S.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS10345 ^@ http://purl.uniprot.org/uniprot/Q53W91 ^@ 21984829 ^@ J Biol Chem|||J. Biol. Chem. ^@ In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress. ^@ Fukui K.|||Kuramitsu S.|||Masui R.|||Nakane S.|||Wakamatsu T.
http://togogenome.org/gene/300852:TTH_RS09810 ^@ http://purl.uniprot.org/uniprot/Q5SGZ9 ^@ 12809486|||19772300 ^@ Biochemistry ^@ Effects of pH on the Rieske protein from Thermus thermophilus: a spectroscopic and structural analysis.|||High-resolution structure of the soluble, respiratory-type Rieske protein from Thermus thermophilus: analysis and comparison. ^@ Britt R.D.|||Chen Y.|||Dicus M.M.|||Fee J.A.|||Heine A.|||Hirst J.|||Hunsicker-Wang L.M.|||Konkle M.E.|||Luna E.P.|||McRee D.E.|||Muellner S.K.|||Pokhrel R.|||Schwander A.L.|||Stout C.D.|||Taylor A.B.|||Todaro T.|||Williams P.A.|||Zhang Y.M.
http://togogenome.org/gene/300852:TTH_RS00500 ^@ http://purl.uniprot.org/uniprot/Q56228 ^@ 9020134 ^@ J. Biol. Chem. ^@ The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Chu S.S.|||Ohnishi T.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS01745 ^@ http://purl.uniprot.org/uniprot/Q5SLG2 ^@ 17929834 ^@ Biochemistry ^@ Crystal structure of monofunctional histidinol phosphate phosphatase from Thermus thermophilus HB8. ^@ Ebihara A.|||Goto M.|||Hirotsu K.|||Manzoku M.|||Miyahara I.|||Omi R.
http://togogenome.org/gene/300852:TTH_RS01430 ^@ http://purl.uniprot.org/uniprot/Q5SLM3 ^@ 15272172|||19544567 ^@ Acta Crystallogr. D|||Proteins ^@ Crystallization and preliminary X-ray analysis of carboxypeptidase 1 from Thermus thermophilus.|||Insight into the substrate length restriction of M32 carboxypeptidases: characterization of two distinct subfamilies. ^@ Chan M.K.|||Chan S.I.|||Chen R.P.|||He H.T.|||Inoue Y.|||Isaza C.E.|||Ito K.|||Kamo M.|||Lee M.M.|||Lee W.C.|||Liang G.F.|||Nagata K.|||Tanokura M.|||Tsutsui S.|||White J.D.
http://togogenome.org/gene/300852:TTH_RS01255 ^@ http://purl.uniprot.org/uniprot/Q5SLQ3 ^@ 18076036 ^@ Proteins ^@ Structural basis of octanoic acid recognition by lipoate-protein ligase B. ^@ Kim H.S.|||Kim K.H.|||Kim do J.|||Lee H.H.|||Lee S.J.|||Suh S.W.|||Yoon H.J.
http://togogenome.org/gene/300852:TTH_RS05880 ^@ http://purl.uniprot.org/uniprot/Q5SJ55 ^@ 25916755 ^@ J Struct Biol|||J. Struct. Biol. ^@ Structural basis for the hydrolysis of ATP by a nucleotide binding subunit of an amino acid ABC transporter from Thermus thermophilus. ^@ Chichili V.P.|||Devi S.K.|||Jeyakanthan J.|||Sivaraman J.|||Velmurugan D.
http://togogenome.org/gene/300852:TTH_RS02120 ^@ http://purl.uniprot.org/uniprot/Q5SL87 ^@ 10485292|||11171970 ^@ Mol. Gen. Genet.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Crystal structure of the Holliday junction migration motor protein RuvB from Thermus thermophilus HB8.|||Novel properties of the Thermus thermophilus RuvB protein, which promotes branch migration of Holliday junctions. ^@ Fukuoh A.|||Iwasaki H.|||Kunishima N.|||Mayanagi K.|||Morikawa K.|||Nishino T.|||Ohnishi T.|||Shinagawa H.|||Yamada K.
http://togogenome.org/gene/300852:TTH_RS10410 ^@ http://purl.uniprot.org/uniprot/Q5SIU5 ^@ 22212656 ^@ Extremophiles ^@ The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination. ^@ Itaya M.|||Ohtani N.|||Tomita M.
http://togogenome.org/gene/300852:TTH_RS02180 ^@ http://purl.uniprot.org/uniprot/P80339 ^@ 11154066|||11283358|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS09235 ^@ http://purl.uniprot.org/uniprot/Q5SHB1 ^@ 12798681 ^@ J. Mol. Biol. ^@ Crystal structure of the 2'-5' RNA ligase from Thermus thermophilus HB8. ^@ Kato M.|||Kuramitsu S.|||Murayama K.|||Sakai H.|||Shirouzu M.|||Terada T.|||Yamaguchi H.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS02885 ^@ http://purl.uniprot.org/uniprot/P60491 ^@ 11154066|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.
http://togogenome.org/gene/300852:TTH_RS05395 ^@ http://purl.uniprot.org/uniprot/Q5SMG8 ^@ 17700703|||19798051|||25367295|||28747715|||33905418 ^@ EMBO J.|||Nat. Commun.|||Nature|||PLoS Biol. ^@ ATP-dependent modulation of MgtE in Mg2+ homeostasis.|||Crystal structure of the MgtE Mg(2+) transporter.|||Mg(2+)-dependent gating of bacterial MgtE channel underlies Mg(2+) homeostasis.|||Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg2+ channel MgtE.|||The structure of MgtE in the absence of magnesium provides new insights into channel gating. ^@ Caffrey M.|||Dohmae N.|||Fujii T.|||Fukai S.|||Furuya N.|||Hashimoto K.I.|||Hattori M.|||Ishitani R.|||Ito K.|||Iwase N.|||Iwata S.|||Jin F.|||Kawasaki H.|||Kusakizako T.|||Liu K.|||Ma J.|||Maguire M.E.|||Maruyama T.|||Maturana A.|||Maturana A.D.|||Nakada-Nakura Y.|||Namba K.|||Nishizawa T.|||Nomura N.|||Nomura Y.|||Nureki O.|||Osawa M.|||Shah S.T.|||Shimada I.|||Su S.|||Sun M.|||Takeda H.|||Tanaka Y.|||Tomita A.|||Tsukazaki T.|||Uemura T.|||Wada M.|||Wang J.|||Yamada Y.|||Yamashita K.|||Yan Z.|||Yu Y.|||Zhang M.|||Zhuang W.
http://togogenome.org/gene/300852:TTH_RS05585 ^@ http://purl.uniprot.org/uniprot/P26996 ^@ 1756968|||1840584 ^@ Gene|||J. Bacteriol. ^@ Cloning, nucleotide sequence, and engineered expression of Thermus thermophilus DNA ligase, a homolog of Escherichia coli DNA ligase.|||Cloning, overexpression and nucleotide sequence of a thermostable DNA ligase-encoding gene. ^@ Ally A.|||Ally D.|||Backman K.C.|||Barany F.|||Gelfand D.H.|||Lauer G.|||McKay D.L.|||Rudd E.A.
http://togogenome.org/gene/300852:TTH_RS01630 ^@ http://purl.uniprot.org/uniprot/Q5SLI2 ^@ 22763450 ^@ Nature ^@ Structural insights into electron transfer in caa3-type cytochrome oxidase. ^@ Aragao D.|||Caffrey M.|||Lyons J.A.|||Pisliakov A.V.|||Slattery O.|||Soulimane T.
http://togogenome.org/gene/300852:TTH_RS01190 ^@ http://purl.uniprot.org/uniprot/Q5SLR4 ^@ 15033367 ^@ J. Mol. Biol. ^@ Ligand-induced conformational changes and a reaction intermediate in branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8, as revealed by X-ray crystallography. ^@ Kamiya N.|||Kuramitsu S.|||Maoka N.|||Masui R.|||Nakagawa N.|||Nakai T.
http://togogenome.org/gene/300852:TTH_RS05020 ^@ http://purl.uniprot.org/uniprot/Q5SJM0 ^@ 21245531 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ The structure of TTHA0988 from Thermus thermophilus, a KipI-KipA homologue incorrectly annotated as an allophanate hydrolase. ^@ Guss J.M.|||Jacques D.A.|||Kuramitsu S.|||Langley D.B.|||Trewhella J.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08515 ^@ http://purl.uniprot.org/uniprot/P0DOY7 ^@ 10476960|||10561594|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Ribosomal gene disruption in the extreme thermophile Thermus thermophilus HB8. Generation of a mutant lacking ribosomal protein S17.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||May J.L.C.|||McCutcheon J.P.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Simitsopoulou M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS05765 ^@ http://purl.uniprot.org/uniprot/Q5SJ79 ^@ 10338009|||10775261|||7657607 ^@ EMBO J.|||J. Biol. Chem.|||Protein Sci. ^@ Evidence for a copper-coordinated histidine-tyrosine cross-link in the active site of cytochrome oxidase.|||Molecular genetic and protein chemical characterization of the cytochrome ba3 from Thermus thermophilus HB8.|||Structure and mechanism of the aberrant ba3-cytochrome c oxidase from Thermus thermophilus. ^@ Bartunik H.D.|||Blueggel M.|||Bourenkov G.P.|||Buse G.|||Dewor M.|||Fee J.A.|||Huber R.|||Keightley J.A.|||Lawrence D.M.|||Mather M.W.|||Meyer H.E.|||Pastuszyn A.|||Soulimane T.|||Springer P.|||Than M.E.|||Zimmermann B.H.
http://togogenome.org/gene/300852:TTH_RS04510 ^@ http://purl.uniprot.org/uniprot/Q5SJX8 ^@ 16740275|||18214979|||24872444 ^@ J. Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteins ^@ Crystal structure of N-acylamino acid racemase from Thermus thermophilus HB8.|||Evolution of structure and function in the o-succinylbenzoate synthase/N-acylamino acid racemase family of the enolase superfamily.|||Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family. ^@ Agarwal R.|||Almo S.C.|||Babbitt P.C.|||Bonanno J.B.|||Burley S.K.|||Chiang R.A.|||Fayazmanesh N.|||Fedorov A.A.|||Fedorov E.V.|||Gerlt J.A.|||Glasner M.E.|||Hayashida M.|||Hisano T.|||Jacobson M.P.|||Kim S.H.|||Malashkevich V.N.|||Miki K.|||Odokonyero D.|||Ozerova N.D.|||Patskovsky Y.|||Sakai A.|||Sauder J.M.|||Swaminathan S.|||Takeda K.|||Toro R.|||Wang C.|||Yew W.S.
http://togogenome.org/gene/300852:TTH_RS04110 ^@ http://purl.uniprot.org/uniprot/Q5SK58 ^@ 20455262 ^@ Proteins ^@ Structure and oligomerization of the PilC type IV pilus biogenesis protein from Thermus thermophilus. ^@ Derrick J.P.|||Hassan D.|||Karuppiah V.|||Saleem M.
http://togogenome.org/gene/300852:TTH_RS03975 ^@ http://purl.uniprot.org/uniprot/Q5SK82 ^@ 19631222 ^@ J. Mol. Biol. ^@ Crystal structure of a periplasmic substrate-binding protein in complex with calcium lactate. ^@ Akiyama N.|||Miki K.|||Takeda K.
http://togogenome.org/gene/300852:TTH_RS04650 ^@ http://purl.uniprot.org/uniprot/Q8RR57 ^@ 12560085|||12677067|||17488812|||20940705|||20953161|||22422985|||22622583 ^@ EMBO J.|||FEBS Lett.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Science ^@ Decoding in the absence of a codon by tmRNA and SmpB in the ribosome.|||Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus.|||Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.|||The complex of tmRNA-SmpB and EF-G on translocating ribosomes.|||Visualizing the transfer-messenger RNA as the ribosome resumes translation.|||Visualizing tmRNA entry into a stalled ribosome.|||tmRNA-SmpB: a journey to the centre of the bacterial ribosome. ^@ Bessho Y.|||Bron P.|||Felden B.|||Frank J.|||Fu J.|||Fujii M.|||Gillet R.|||Giudice E.|||Hashem Y.|||Hatanaka H.|||Henne A.|||Higashijima K.|||Hori-Takemoto C.|||Hosoi H.|||Inoue Y.|||Ivanov P.|||Kaur S.|||Kawai G.|||Kelley A.C.|||Kuramitsu S.|||Lei J.|||Liao H.Y.|||Loerke J.|||Mielke T.|||Murayama K.|||Nameki N.|||Neubauer C.|||Nierhaus K.H.|||Pech M.|||Ramakrishnan V.|||Ramrath D.J.|||Rolland J.P.|||Rother K.|||Scheerer P.|||Sekine S.|||Shibata R.|||Shibata T.|||Shirouzu M.|||Shpanchenko O.|||Someya T.|||Spahn C.M.|||Suzuki S.|||Terada T.|||Teraoka Y.|||Thomas D.|||Valle M.|||Weis F.|||Wittek D.|||Wower I.|||Wower J.|||Yamamoto H.|||Yokoyama S.|||Zwieb C.
http://togogenome.org/gene/300852:TTH_RS08970 ^@ http://purl.uniprot.org/uniprot/Q5SHG1 ^@ 31501539 ^@ Nat Microbiol|||Nat. Microbiol. ^@ The structure of bactofilin filaments reveals their mode of membrane binding and lack of polarity. ^@ Cannone G.|||Deng X.|||Gonzalez Llamazares A.|||Hale V.L.|||Kureisaite-Ciziene D.|||Lowe J.|||McLaughlin S.H.|||Wagstaff J.M.
http://togogenome.org/gene/300852:TTH_RS10950 ^@ http://purl.uniprot.org/uniprot/Q53VY1 ^@ 22521690|||22621933 ^@ J. Biol. Chem.|||Mol. Cell ^@ Crystal structure of the largest subunit of a bacterial RNA-guided immune complex and its role in DNA target binding.|||Mechanism of foreign DNA selection in a bacterial adaptive immune system. ^@ Bailey S.|||Doudna J.A.|||Mulepati S.|||Orr A.|||Sashital D.G.|||Wiedenheft B.
http://togogenome.org/gene/300852:TTH_RS03780 ^@ http://purl.uniprot.org/uniprot/Q5SMF5 ^@ 16597838 ^@ Protein Sci|||Protein Sci. ^@ Crystal structure of the conserved protein TTHA0727 from Thermus thermophilus HB8 at 1.9 A resolution: A CMD family member distinct from carboxymuconolactone decarboxylase (CMD) and AhpD. ^@ Akasaka R.|||Arai R.|||Fusatomi E.|||Ito K.|||Kamo-Uchikubo T.|||Kawaguchi S.|||Kuramitsu S.|||Shirouzu M.|||Terada T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS04255 ^@ http://purl.uniprot.org/uniprot/Q5SK28 ^@ 15983049|||21458463 ^@ J. Biol. Chem.|||J. Mol. Biol. ^@ Crystal structures and enzymatic properties of a triamine/agmatine aminopropyltransferase from Thermus thermophilus.|||N1-aminopropylagmatine, a new polyamine produced as a key intermediate in polyamine biosynthesis of an extreme thermophile, Thermus thermophilus. ^@ Ganbe T.|||Kawashima E.|||Kumasaka T.|||Mitome H.|||Niitsu M.|||Ohnuma M.|||Oshima T.|||Samejima K.|||Sato T.|||Tamakoshi M.|||Tanaka N.|||Terui Y.
http://togogenome.org/gene/300852:TTH_RS03625 ^@ http://purl.uniprot.org/uniprot/Q5SKE6 ^@ 21562494 ^@ Nature ^@ Structure and function of a membrane component SecDF that enhances protein export. ^@ Echizen Y.|||Fukai S.|||Ishitani R.|||Ito K.|||Kohno T.|||Maturana A.D.|||Mori H.|||Nureki O.|||Perederina A.|||Tanaka T.|||Tsukazaki T.|||Vassylyev D.G.
http://togogenome.org/gene/300852:TTH_RS07770 ^@ http://purl.uniprot.org/uniprot/P33197 ^@ 1539996 ^@ Appl. Environ. Microbiol. ^@ Molecular cloning of the isocitrate dehydrogenase gene of an extreme thermophile, Thermus thermophilus HB8. ^@ Eguchi H.|||Miyazaki K.|||Oshima T.|||Wakagi T.|||Yamagishi A.
http://togogenome.org/gene/300852:TTH_RS07420 ^@ http://purl.uniprot.org/uniprot/Q5SIA8 ^@ 15296735 ^@ Structure ^@ Crystal structures of CTP synthetase reveal ATP, UTP, and glutamine binding sites. ^@ Goto M.|||Hirotsu K.|||Miyahara I.|||Nakagawa N.|||Omi R.
http://togogenome.org/gene/300852:TTH_RS01440 ^@ http://purl.uniprot.org/uniprot/P61493 ^@ 1682319|||8543569 ^@ J. Biochem.|||J. Biol. Chem. ^@ A chaperonin from a thermophilic bacterium, Thermus thermophilus, that controls refoldings of several thermophilic enzymes.|||Molecular cloning, expression, and characterization of chaperonin-60 and chaperonin-10 from a thermophilic bacterium, Thermus thermophilus HB8. ^@ Amada K.|||Endo I.|||Ishii N.|||Konishi J.|||Odaka M.|||Taguchi H.|||Yohda M.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS05755 ^@ http://purl.uniprot.org/uniprot/P82543 ^@ 10775261|||11152118 ^@ EMBO J.|||Protein Sci. ^@ Primary structure of a novel subunit in ba3-cytochrome oxidase from Thermus thermophilus.|||Structure and mechanism of the aberrant ba3-cytochrome c oxidase from Thermus thermophilus. ^@ Bartunik H.D.|||Bourenkov G.P.|||Buse G.|||Dewor M.|||Huber R.|||Soulimane T.|||Than M.E.
http://togogenome.org/gene/300852:TTH_RS03220 ^@ http://purl.uniprot.org/uniprot/Q5SKM5 ^@ 29372898 ^@ Acta Crystallogr D Struct Biol|||Acta Crystallogr. D ^@ The folate-binding module of Thermus thermophilus cobalamin-dependent methionine synthase displays a distinct variation of the classical TIM barrel: a TIM barrel with a `twist'.|||The folate-binding module of Thermus thermophilus cobalamin-dependent methionine synthase displays a distinct variation of the classical TIM barrel: a TIM barrel with a twist'. ^@ Koutmos M.|||Yamada K.
http://togogenome.org/gene/300852:TTH_RS10895 ^@ http://purl.uniprot.org/uniprot/Q53VZ2 ^@ 34866608 ^@ Acta Crystallogr D Struct Biol|||Acta Crystallogr. D Struct. Biol. ^@ Structural and thermodynamic insights into a novel Mg2+-citrate-binding protein from the ABC transporter superfamily. ^@ Kanaujia S.P.|||Mandal S.K.
http://togogenome.org/gene/300852:TTH_RS04385 ^@ http://purl.uniprot.org/uniprot/Q5SK03 ^@ 16511226 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structure of a conserved hypothetical protein, TTHA0849 from Thermus thermophilus HB8, at 2.4 A resolution: a putative member of the StAR-related lipid-transfer (START) domain superfamily. ^@ Ebihara A.|||Higuchi Y.|||Iino H.|||Komori H.|||Kuramitsu S.|||Nakabayashi M.|||Shibata N.|||Ueda Y.
http://togogenome.org/gene/300852:TTH_RS09195 ^@ http://purl.uniprot.org/uniprot/Q5SHB9 ^@ 16511238 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Purification, crystallization and preliminary X-ray crystallographic study of the L-fuculose-1-phosphate aldolase (FucA) from Thermus thermophilus HB8. ^@ Jeyakanthan J.|||Kikuchi A.|||Kuroishi C.|||Shiro Y.|||Taka J.|||Yutani K.
http://togogenome.org/gene/300852:TTH_RS05270 ^@ http://purl.uniprot.org/uniprot/Q5SJH3 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS09645 ^@ http://purl.uniprot.org/uniprot/Q5SH28 ^@ 21097495 ^@ J. Biol. Chem. ^@ Thermus thermophilus glycoside hydrolase family 57 branching enzyme: crystal structure, mechanism of action, and products formed. ^@ Booiman T.|||Dijkhuizen L.|||Dijkstra B.W.|||Dobruchowska J.M.|||Kamerling J.P.|||Kralj S.|||Leemhuis H.|||Loos K.|||Palomo M.|||Pijning T.|||Planas A.|||van der Maarel M.J.|||van der Vlist J.
http://togogenome.org/gene/300852:TTH_RS01295 ^@ http://purl.uniprot.org/uniprot/Q5SLP6 ^@ 10333296|||11154066|||11283358|||11511350|||1447157|||15317787|||16287167|||16377566|||18611379|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||J. Bacteriol.|||J. Protein Chem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science|||Structure ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Identification of the gene encoding transcription factor NusG of Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Multiple-site trimethylation of ribosomal protein L11 by the PrmA methyltransferase.|||Structural and functional studies on the overproduced L11 protein from Thermus thermophilus.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||Thermus thermophilus L11 methyltransferase, PrmA, is dispensable for growth and preferentially modifies free ribosomal protein L11 prior to ribosome assembly. ^@ Anagnostopoulos K.|||Baucom A.|||Brodersen D.E.|||Cameron D.M.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Demirci H.|||Dunham C.M.|||Earnest T.N.|||Erdmann V.A.|||Franceschi F.|||Gregory S.T.|||Hamburg D.M.|||Hartmann R.K.|||Heinrich T.|||Jin H.|||Jogl G.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Schroeder W.|||Selmer M.|||Simitsopoulou M.|||Suh M.-J.|||Tarry M.J.|||Thompson J.|||Triantafillidou D.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS01410 ^@ http://purl.uniprot.org/uniprot/Q5SLM7 ^@ 25760608 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ An intermolecular binding mechanism involving multiple LysM domains mediates carbohydrate recognition by an endopeptidase. ^@ Blaise M.|||Gysel K.|||Jensen K.J.|||Midtgaard S.R.|||Sorensen K.K.|||Stougaard J.|||Thirup S.|||Thygesen M.B.|||Wong J.E.
http://togogenome.org/gene/300852:TTH_RS09170 ^@ http://purl.uniprot.org/uniprot/O50606 ^@ 10921868|||9461446 ^@ EMBO J.|||Nucleic Acids Res. ^@ Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8.|||Thermostable repair enzyme for oxidative DNA damage from extremely thermophilic bacterium, Thermus thermophilus HB8. ^@ Fukuyama K.|||Inoue Y.|||Kato R.|||Kumasaka T.|||Kuramitsu S.|||Mikawa T.|||Sugahara M.|||Yamamoto M.
http://togogenome.org/gene/300852:TTH_RS06300 ^@ http://purl.uniprot.org/uniprot/Q5SIX3 ^@ 29590088|||32152588 ^@ Nat Microbiol|||Nat. Microbiol.|||Nature ^@ Structural coordination of polymerization and crosslinking by a SEDS-bPBP peptidoglycan synthase complex.|||Structure of the peptidoglycan polymerase RodA resolved by evolutionary coupling analysis. ^@ Bernhardt T.G.|||Brock K.|||Brock K.P.|||Dobihal G.|||Erlandson S.C.|||Gilman M.S.A.|||Green A.G.|||Hopf T.A.|||Kahne D.|||Kruse A.C.|||Marks D.S.|||Meeske A.J.|||Rohs P.D.A.|||Rudner D.Z.|||Sjodt M.|||Srisuknimit V.|||Taguchi A.|||Walker S.|||Zheng S.
http://togogenome.org/gene/300852:TTH_RS02155 ^@ http://purl.uniprot.org/uniprot/Q5SL80 ^@ 18453702 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structure of 3-oxoacyl-(acyl-carrier protein) synthase II from Thermus thermophilus HB8. ^@ Bagautdinov B.|||Kunishima N.|||Miyano M.|||Ukita Y.
http://togogenome.org/gene/300852:TTH_RS02590 ^@ http://purl.uniprot.org/uniprot/Q5SKZ7 ^@ 16469879|||16584177 ^@ Biochemistry|||Science ^@ Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus. ^@ Carroll J.|||Hinchliffe P.|||Sazanov L.A.
http://togogenome.org/gene/300852:TTH_RS02985 ^@ http://purl.uniprot.org/uniprot/Q9LCX3 ^@ 10913601 ^@ FEBS Lett. ^@ The heterotrimeric Thermus thermophilus Asp-tRNA(Asn) amidotransferase can also generate Gln-tRNA(Gln). ^@ Becker H.D.|||Jacobi C.|||Kern D.|||Klein S.|||Min B.|||Pelaschier J.|||Raczniak G.|||Roy H.|||Soell D.
http://togogenome.org/gene/300852:TTH_RS06795 ^@ http://purl.uniprot.org/uniprot/Q5SIM6 ^@ 27493854 ^@ Biophys Physicobio.|||Biophys Physicobiol ^@ Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8. ^@ Kanamori E.|||Kawaguchi S.|||Kouyama T.|||Kuramitsu S.|||Murakami M.
http://togogenome.org/gene/300852:TTH_RS03730 ^@ http://purl.uniprot.org/uniprot/Q5SKC5 ^@ 12000829|||14556741 ^@ J. Mol. Biol.|||Nucleic Acids Res. ^@ A novel type of uracil-DNA glycosylase mediating repair of hydrolytic DNA damage in the extremely thermophilic eubacterium Thermus thermophilus.|||Crystal structure of a family 4 uracil-DNA glycosylase from Thermus thermophilus HB8. ^@ Fritz H.J.|||Hoseki J.|||Inoue Y.|||Kuramitsu S.|||Masui R.|||Okamoto A.|||Shibata T.|||Starkuviene V.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS10005 ^@ http://purl.uniprot.org/uniprot/Q9LCY2 ^@ 11167017|||19622680 ^@ Gene|||RNA ^@ Identification and characterization of the dnaA upstream region of Thermus thermophilus.|||Structural and functional studies of the Thermus thermophilus 16S rRNA methyltransferase RsmG. ^@ Belardinelli R.|||Dahlberg A.E.|||Demirci H.|||Gregory S.T.|||Gualerzi C.|||Jogl G.|||Messer W.|||Monshupanee T.|||Nardmann J.
http://togogenome.org/gene/300852:TTH_RS07265 ^@ http://purl.uniprot.org/uniprot/Q5SID9 ^@ 15046984 ^@ J Mol Biol|||J. Mol. Biol. ^@ Crystal structure of purine nucleoside phosphorylase from Thermus thermophilus. ^@ Inagaki E.|||Kitao T.|||Kobayashi M.|||Kuramitsu S.|||Kuroishi C.|||Miyano M.|||Ohshima N.|||Tahirov T.H.|||Takio K.|||Ukita Y.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS04310 ^@ http://purl.uniprot.org/uniprot/Q5SK18 ^@ 21358045 ^@ Acta Crystallogr D Biol Crystallogr|||Acta Crystallogr. D ^@ An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA. ^@ Asano R.|||Ishikawa H.|||Kuramitsu S.|||Masui R.|||Nakagawa N.|||Nakane S.
http://togogenome.org/gene/300852:TTH_RS01575 ^@ http://purl.uniprot.org/uniprot/Q5SLJ4 ^@ 22591843 ^@ J Biosci Bioeng|||J. Biosci. Bioeng. ^@ Characterization and crystal structure of the thermophilic ROK hexokinase from Thermus thermophilus. ^@ Kashima Y.|||Mine S.|||Nakamura T.|||Oku T.|||Uegaki K.
http://togogenome.org/gene/300852:TTH_RS09525 ^@ http://purl.uniprot.org/uniprot/Q5SH51 ^@ 30895492 ^@ BioMetals|||Biometals ^@ Molecular structure of thermostable and zinc-ion-binding gamma-class carbonic anhydrases. ^@ Jing Q.|||Wang H.|||Wang L.|||Wang W.|||Wang X.|||Xi X.|||Zhang Y.|||Zhao X.
http://togogenome.org/gene/300852:TTH_RS09960 ^@ http://purl.uniprot.org/uniprot/P21777 ^@ 1828151|||1830879|||2146397|||4335287 ^@ Biochem. Biophys. Res. Commun.|||Biochemistry|||J. Biochem.|||J. Mol. Biol. ^@ Allosteric nature of thermostable phosphofructokinase from an extreme thermophilic bacterium.|||Molecular cloning of phosphofructokinase 1 gene from a thermophilic bacterium, Thermus thermophilus.|||Phosphoenolpyruvate-insensitive phosphofructokinase isozyme from Thermus thermophilus HB8.|||Tetramer-dimer conversion of phosphofructokinase from Thermus thermophilus induced by its allosteric effectors. ^@ Denda K.|||Oshima T.|||Seki M.|||Xu J.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS01485 ^@ http://purl.uniprot.org/uniprot/Q5SLL2 ^@ 17329807 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structure of a UPF0150-family protein from Thermus thermophilus HB8. ^@ Kumei M.|||Kuramitsu S.|||Manzoku M.|||Okazaki N.|||Shinkai A.|||Shirouzu M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS07235 ^@ http://purl.uniprot.org/uniprot/Q5SIE5 ^@ 18767153 ^@ Proteins ^@ Crystal structure of TTHA1429, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8. ^@ Agari Y.|||Ebihara A.|||Kubota K.|||Nagata K.|||Nakagawa N.|||Ohtsuka J.|||Tanokura M.|||Yamamura A.
http://togogenome.org/gene/300852:TTH_RS01550 ^@ http://purl.uniprot.org/uniprot/Q5SLJ9 ^@ 15459330 ^@ Protein Sci|||Protein Sci. ^@ Crystal structures of possible lysine decarboxylases from Thermus thermophilus HB8. ^@ Bessho Y.|||Idaka M.|||Kato-Murayama M.|||Kukimoto-Niino M.|||Kuramitsu S.|||Murayama K.|||Shirouzu M.|||Tatsuguchi A.|||Terada T.|||Ushikoshi-Nakayama R.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS07400 ^@ http://purl.uniprot.org/uniprot/Q5SIB2 ^@ 15689504 ^@ Protein Sci|||Protein Sci. ^@ Crystal structure of a predicted phosphoribosyltransferase (TT1426) from Thermus thermophilus HB8 at 2.01 A resolution. ^@ Bessho Y.|||Hamana H.|||Kukimoto-Niino M.|||Kuramitsu S.|||Murayama K.|||Nishimoto M.|||Shibata R.|||Shirouzu M.|||Terada T.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS06415 ^@ http://purl.uniprot.org/uniprot/Q5SIU9 ^@ 35276293 ^@ Int J Biol Macromol|||Int. J. Biol. Macromol. ^@ Crystal structures of TTHA1265 and TTHA1264/TTHA1265 complex reveal an intrinsic heterodimeric assembly. ^@ He J.|||Qiu S.|||Ran T.|||Sun B.|||Wang M.|||Wang Q.|||Wang W.|||Xu D.|||Xu M.|||Xu Q.|||Zhang W.
http://togogenome.org/gene/300852:TTH_RS05430 ^@ http://purl.uniprot.org/uniprot/P56690 ^@ 11584022|||14672940|||9554847 ^@ J. Biol. Chem.|||Science ^@ Crystal structures of the CP1 domain from Thermus thermophilus isoleucyl-tRNA synthetase and its complex with L-valine.|||Enzyme structure with two catalytic sites for double-sieve selection of substrate.|||Structural basis for the recognition of isoleucyl-adenylate and an antibiotic, mupirocin, by isoleucyl-tRNA synthetase. ^@ Fukai S.|||Fukunaga R.|||Hendrickson T.L.|||Ishitani R.|||Konno M.|||Nakama T.|||Nureki O.|||Schimmel P.|||Shimada A.|||Tateno M.|||Vassylyev D.G.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09975 ^@ http://purl.uniprot.org/uniprot/P38576 ^@ 7920256|||9644249 ^@ J. Biochem.|||Protein Sci. ^@ Crystal structure of inorganic pyrophosphatase from Thermus thermophilus.|||Molecular cloning, expression, and site-directed mutagenesis of inorganic pyrophosphatase from Thermus thermophilus HB8. ^@ Ishii K.|||Kaji H.|||Kuranova I.|||Nogi S.|||Obmolova G.|||Samejima T.|||Satoh T.|||Takahashi Y.|||Teplyakov A.|||Watanabe M.|||Wilson K.S.
http://togogenome.org/gene/300852:TTH_RS07535 ^@ http://purl.uniprot.org/uniprot/P77527 ^@ 10092456|||8663379 ^@ J. Biol. Chem.|||J. Mol. Biol. ^@ A novel factor required for the assembly of the DnaK and DnaJ chaperones of Thermus thermophilus.|||The functional cycle and regulation of the Thermus thermophilus DnaK chaperone system. ^@ Endo I.|||Klostermeier D.|||Motohashi K.|||Reinstein J.|||Seidel R.|||Yohda M.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS08320 ^@ http://purl.uniprot.org/uniprot/Q5SHT6 ^@ 15459330 ^@ Protein Sci|||Protein Sci. ^@ Crystal structures of possible lysine decarboxylases from Thermus thermophilus HB8. ^@ Bessho Y.|||Idaka M.|||Kato-Murayama M.|||Kukimoto-Niino M.|||Kuramitsu S.|||Murayama K.|||Shirouzu M.|||Tatsuguchi A.|||Terada T.|||Ushikoshi-Nakayama R.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS05835 ^@ http://purl.uniprot.org/uniprot/Q5SJ65 ^@ 12000829|||17870091|||24838246 ^@ J. Biol. Chem.|||J. Mol. Biol.|||Nucleic Acids Res. ^@ A novel type of uracil-DNA glycosylase mediating repair of hydrolytic DNA damage in the extremely thermophilic eubacterium Thermus thermophilus.|||Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.|||Specificity and catalytic mechanism in family 5 uracil DNA glycosylase. ^@ Brice A.R.|||Cao W.|||Dominy B.N.|||Fritz H.J.|||Hoseki J.|||Kosaka H.|||Kuramitsu S.|||Li W.|||Liu Y.|||Masui R.|||Nakagawa N.|||Starkuviene V.|||Xia B.
http://togogenome.org/gene/300852:TTH_RS04365 ^@ http://purl.uniprot.org/uniprot/Q5SK07 ^@ 16946463 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structure of the stand-alone RAM-domain protein from Thermus thermophilus HB8. ^@ Kuramitsu S.|||Nakano N.|||Okazaki N.|||Satoh S.|||Shinkai A.|||Takio K.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS07550 ^@ http://purl.uniprot.org/uniprot/Q56235 ^@ 10092456|||10377389|||9276481|||9349721 ^@ Biochim. Biophys. Acta|||FEBS Lett.|||J. Mol. Biol.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Cloning, sequencing, and expression of dnaK-operon proteins from the thermophilic bacterium Thermus thermophilus.|||Heat-inactivated proteins are rescued by the DnaK/J-GrpE set and ClpB chaperones.|||K+ is an indispensable cofactor for GrpE stimulation of ATPase activity of DnaK/DnaJ complex from Thermus thermophilus.|||The functional cycle and regulation of the Thermus thermophilus DnaK chaperone system. ^@ Joachimiak A.|||Klostermeier D.|||Motohashi K.|||Odaka M.|||Osipiuk J.|||Reinstein J.|||Seidel R.|||Watanabe Y.H.|||Yohda M.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS07455 ^@ http://purl.uniprot.org/uniprot/Q5SIA2 ^@ 26828964 ^@ Nat Struct Mol Biol|||Nat. Struct. Mol. Biol. ^@ Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters. ^@ Abdul-Hussein S.|||Beckstein O.|||Cameron A.D.|||Coincon M.|||Dotson D.L.|||Drew D.|||Nji E.|||Uzdavinys P.|||Winkelmann I.
http://togogenome.org/gene/300852:TTH_RS00455 ^@ http://purl.uniprot.org/uniprot/Q56220 ^@ 16469879|||16584177|||9020134 ^@ Biochemistry|||J. Biol. Chem.|||Science ^@ Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.|||The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Carroll J.|||Chu S.S.|||Hinchliffe P.|||Ohnishi T.|||Sazanov L.A.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS00620 ^@ http://purl.uniprot.org/uniprot/Q5SM25 ^@ 21087930 ^@ J. Biol. Chem. ^@ Role of RecJ-like protein with 5'-3' exonuclease activity in oligo(deoxy)nucleotide degradation. ^@ Kim K.|||Kuramitsu S.|||Masui R.|||Nakagawa N.|||Uemura Y.|||Wakamatsu T.
http://togogenome.org/gene/300852:TTH_RS02900 ^@ http://purl.uniprot.org/uniprot/Q5SKT7 ^@ 18801996|||19420717|||21098241 ^@ Antimicrob. Agents Chemother.|||Biosci. Biotechnol. Biochem.|||Science ^@ An alternative menaquinone biosynthetic pathway operating in microorganisms.|||Diversity of the early step of the futalosine pathway.|||Enzymatic properties of futalosine hydrolase, an enzyme essential to a newly identified menaquinone biosynthetic pathway. ^@ Arakawa C.|||Dairi T.|||Furihata K.|||Hiratsuka T.|||Ishikawa J.|||Itoh N.|||Kuratsu M.|||Seto H.|||Yamashita H.
http://togogenome.org/gene/300852:TTH_RS08425 ^@ http://purl.uniprot.org/uniprot/P80373 ^@ 10476960|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||25775268|||26792896|||7957245|||9880810 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Biochem.|||J. Mol. Biol.|||Nat. Struct. Mol. Biol.|||Nature|||Nucleic Acids Res.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein.|||Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Arenz S.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Graf M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Innis C.A.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Kuramitsu S.|||Kyogoku Y.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Mardirossian M.|||May J.L.C.|||McCutcheon J.P.|||Melnikov S.V.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Nguyen F.|||Noller H.F.|||Ogle J.M.|||Perebaskine N.|||Petry S.|||Pioletti M.|||Polikanov Y.S.|||Ramakrishnan V.|||Schluenzen F.|||Scocchi M.|||Seefeldt A.C.|||Selmer M.|||Soll D.|||Steitz T.A.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Wada T.|||Weixlbaumer A.|||Wilson D.N.|||Wimberly B.T.|||Yamazaki T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS10015 ^@ http://purl.uniprot.org/uniprot/Q9X9D5 ^@ 10835275 ^@ J. Mol. Biol. ^@ Identification of the chromosomal replication origin from Thermus thermophilus and its interaction with the replication initiator DnaA. ^@ Lueder G.|||Lurz R.|||Messer W.|||Nardmann J.|||Schaper S.|||Speck C.
http://togogenome.org/gene/300852:TTH_RS06180 ^@ http://purl.uniprot.org/uniprot/Q5SIZ6 ^@ 27612581 ^@ J Struct Biol|||J. Struct. Biol. ^@ Structures of type IV pilins from Thermus thermophilus demonstrate similarities with type II secretion system pseudopilins. ^@ Derrick J.P.|||Karuppiah V.|||Thistlethwaite A.
http://togogenome.org/gene/300852:TTH_RS09470 ^@ http://purl.uniprot.org/uniprot/Q5SIU5 ^@ 22212656 ^@ Extremophiles ^@ The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination. ^@ Itaya M.|||Ohtani N.|||Tomita M.
http://togogenome.org/gene/300852:TTH_RS00465 ^@ http://purl.uniprot.org/uniprot/Q56222 ^@ 16469879|||16584177|||9020134 ^@ Biochemistry|||J. Biol. Chem.|||Science ^@ Identification of a novel subunit of respiratory complex I from Thermus thermophilus.|||Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.|||The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Carroll J.|||Chu S.S.|||Hinchliffe P.|||Ohnishi T.|||Sazanov L.A.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS07555 ^@ http://purl.uniprot.org/uniprot/Q5SI82 ^@ 10377389|||10788805|||12377127|||16762831 ^@ J. Biochem.|||Mol. Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Structure ^@ FtsH recognizes proteins with unfolded structure and hydrolyzes the carboxyl side of hydrophobic residues.|||Heat-inactivated proteins are rescued by the DnaK/J-GrpE set and ClpB chaperones.|||Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8.|||Structure of the whole cytosolic region of ATP-dependent protease FtsH. ^@ Asahara Y.|||Atsuta K.|||Makyio H.|||Morikawa K.|||Motohashi K.|||Niwa H.|||Suno R.|||Taguchi H.|||Tsuchiya D.|||Watanabe Y.H.|||Yohda M.|||Yoshida M.|||Zhang X.
http://togogenome.org/gene/300852:TTH_RS07275 ^@ http://purl.uniprot.org/uniprot/Q5SID7 ^@ 17369302 ^@ J. Bacteriol. ^@ Transcription activation mediated by a cyclic AMP receptor protein from Thermus thermophilus HB8. ^@ Kashihara A.|||Kira S.|||Kuramitsu S.|||Nakagawa N.|||Shinkai A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08415 ^@ http://purl.uniprot.org/uniprot/Q9Z9H5 ^@ 11154066|||15802605|||16287167|||16377566|||16959973|||18988853|||20421507|||9880810 ^@ Biol. Chem.|||Cell|||J. Biochem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Structure of the 70S ribosome complexed with mRNA and tRNA.|||Translational operator of mRNA on the ribosome: how repressor proteins exclude ribosome binding. ^@ Anagnostopoulos K.|||Brodersen D.E.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Dunham C.M.|||Ehresmann B.|||Ehresmann C.|||Gregory S.T.|||Hamburg D.M.|||Jenner L.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Kuramitsu S.|||Kyogoku Y.|||Limbach P.A.|||Loakes D.|||Moras D.|||Murphy F.V.|||Murphy F.V. IV|||Neubauer C.|||Petry S.|||Ramakrishnan V.|||Rees B.|||Romby P.|||Schulze-Briese C.|||Selmer M.|||Springer M.|||Suh M.-J.|||Tarry M.J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Wada T.|||Weir J.R.|||Weixlbaumer A.|||Yamazaki T.|||Yusupov M.|||Yusupova G.
http://togogenome.org/gene/300852:TTH_RS08470 ^@ http://purl.uniprot.org/uniprot/Q5SHQ6 ^@ 11154066|||11283358|||11511350|||16287167|||16377566|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Brodersen D.E.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS08440 ^@ http://purl.uniprot.org/uniprot/Q5SHR2 ^@ 11154066|||16287167|||18988853|||20421507|||9880810 ^@ Biol. Chem.|||J. Biochem.|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. ^@ Anagnostopoulos K.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Kuramitsu S.|||Kyogoku Y.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Wada T.|||Weixlbaumer A.|||Yamazaki T.
http://togogenome.org/gene/300852:TTH_RS08505 ^@ http://purl.uniprot.org/uniprot/Q5SHP9 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS03235 ^@ http://purl.uniprot.org/uniprot/Q5SKM2 ^@ 20054118 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structure of putative 4-amino-4-deoxychorismate lyase from Thermus thermophilus HB8. ^@ Antonyuk S.V.|||Bessho Y.|||Ebihara A.|||Ellis M.J.|||Hasnain S.S.|||Kuramitsu S.|||Padmanabhan B.|||Strange R.W.|||Watanabe N.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS03945 ^@ http://purl.uniprot.org/uniprot/Q5SK88 ^@ 11566369 ^@ Biochim. Biophys. Acta ^@ Cloning and overexpression of the oah1 gene encoding O-acetyl-L-homoserine sulfhydrylase of Thermus thermophilus HB8 and characterization of the gene product. ^@ Inoue Y.|||Iwama T.|||Kuramitsu S.|||Masui R.|||Shibata T.|||Shimizu H.|||Yamagata S.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08495 ^@ http://purl.uniprot.org/uniprot/P0DOY6 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7794527|||7957245|||9746356 ^@ Biol. Chem. Hoppe-Seyler|||Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||Studies on S14 protein from Thermus thermophilus possessing zinc finger-like motifs.|||Studies on the Zn-containing S14 ribosomal protein from Thermus thermophilus.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Choli-Papadopoulou T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Triantafillidou D.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS09230 ^@ http://purl.uniprot.org/uniprot/Q5SHB2 ^@ 8138553 ^@ J. Biochem. ^@ RecA protein from an extremely thermophilic bacterium, Thermus thermophilus HB8. ^@ Kato R.|||Kuramitsu S.
http://togogenome.org/gene/300852:TTH_RS03240 ^@ http://purl.uniprot.org/uniprot/Q5SKM1 ^@ 25601758 ^@ Mol Cell|||Mol. Cell ^@ The ratcheted and ratchetable structural states of RNA polymerase underlie multiple transcriptional functions. ^@ Murayama Y.|||Nudler E.|||Sekine S.|||Svetlov V.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08570 ^@ http://purl.uniprot.org/uniprot/Q5SHN6 ^@ 11278992|||12677067|||27224426|||2826164|||3317278|||8416965 ^@ Eur. J. Biochem.|||J. Biol. Chem.|||Nucleic Acids Res.|||PLoS Biol.|||Science ^@ Conformational change of elongation factor Tu (EF-Tu) induced by antibiotic binding. Crystal structure of the complex between EF-Tu.GDP and aurodox.|||Elongation factor Tu prevents misediting of Gly-tRNA(Gly) caused by the design behind the chiral proofreading site of D-aminoacyl-tRNA deacylase.|||Molecular cloning and sequence determination of the tuf gene coding for the elongation factor Tu of Thermus thermophilus HB8.|||Prokaryotic elongation factor Tu is phosphorylated in vivo.|||Sequence and identification of the nucleotide binding site for the elongation factor Tu from Thermus thermophilus HB8.|||Visualizing tmRNA entry into a stalled ribosome. ^@ Ahmad S.|||Bosch L.|||Erdmann V.A.|||Frank J.|||Gillet R.|||Henne A.|||Hilgenfeld R.|||Kaur S.|||Kruparani S.P.|||Kumar M.|||Kuncha S.K.|||Kushiro A.|||Lindschau C.|||Lippmann C.|||Meissner F.|||Mesters J.R.|||Palm G.J.|||Pawar K.I.|||Peter M.|||Ramakrishnan V.|||Routh S.B.|||Sankaranarayanan R.|||Schroeder W.|||Seidler L.|||Shimizu M.|||Singh S.|||Sprinzl M.|||Suma K.|||Tomita K.|||Valle M.|||Vijgenboom E.|||Vogeley L.|||Yadav K.
http://togogenome.org/gene/300852:TTH_RS09870 ^@ http://purl.uniprot.org/uniprot/Q5SGY7 ^@ 18758441 ^@ Nat Chem Biol|||Nat. Chem. Biol. ^@ Mechanism of Cu(A) assembly. ^@ Abriata L.A.|||Banci L.|||Bertini I.|||Ciofi-Baffoni S.|||Gkazonis P.|||Spyroulias G.A.|||Vila A.J.|||Wang S.
http://togogenome.org/gene/300852:TTH_RS06250 ^@ http://purl.uniprot.org/uniprot/Q5SIY4 ^@ 10810156|||11173468|||15299625|||1748999|||6321488|||7881901|||8119295|||8405446 ^@ Acta Crystallogr. D|||Eur. J. Biochem.|||FEBS Lett.|||J. Biol. Chem.|||J. Mol. Biol.|||Protein Eng.|||Structure ^@ Cryocrystallography of 3-Isopropylmalate dehydrogenase from Thermus thermophilus and its chimeric enzyme.|||Crystal structures of 3-isopropylmalate dehydrogenase with mutations at the C-terminus: crystallographic analyses of structure-stability relationships.|||Design, X-ray crystallography, molecular modelling and thermal stability studies of mutant enzymes at site 172 of 3-isopropylmalate dehydrogenase from Thermus thermophilus.|||High guanine plus cytosine content in the third letter of codons of an extreme thermophile. DNA sequence of the isopropylmalate dehydrogenase of Thermus thermophilus.|||Hydrophobic interaction at the subunit interface contributes to the thermostability of 3-isopropylmalate dehydrogenase from an extreme thermophile, Thermus thermophilus.|||Structure of 3-isopropylmalate dehydrogenase in complex with NAD+: ligand-induced loop closing and mechanism for cofactor specificity.|||Three-dimensional structure of a highly thermostable enzyme, 3-isopropylmalate dehydrogenase of Thermus thermophilus at 2.2-A resolution.|||Tyr-139 in Thermus thermophilus 3-isopropylmalate dehydrogenase is involved in catalytic function. ^@ Akanuma S.|||Aoki M.|||Aoshima M.|||Dean A.M.|||Hayashi Y.|||Hurley J.H.|||Imada K.|||Ishizuka M.|||Kagawa Y.|||Katsube Y.|||Kirino H.|||Matsuura Y.|||Miyazaki K.|||Moriyama H.|||Nagata C.|||Nakajima T.|||Nakasako M.|||Nojima H.|||Nukiwa N.|||Nurachman Z.|||Ohba M.|||Oshima T.|||Qu C.|||Sato M.|||Sato T.|||Tanaka N.|||Tanaka T.|||Ueki T.|||Wakagi T.|||Yamagishi A.|||Yamamoto M.|||Yasuhara T.
http://togogenome.org/gene/300852:TTH_RS06575 ^@ http://purl.uniprot.org/uniprot/P23395 ^@ 10673435|||1993699 ^@ J. Biol. Chem.|||Structure ^@ Methionyl-tRNA synthetase gene from an extreme thermophile, Thermus thermophilus HB8. Molecular cloning, primary-structure analysis, expression in Escherichia coli, and site-directed mutagenesis.|||The 2.0-A crystal structure of Thermus thermophilus methionyl-tRNA synthetase reveals two RNA-binding modules. ^@ Giege R.|||Kohda D.|||Konno M.|||Kuwabara S.|||Lorber B.|||Matsuzawa H.|||Miyazawa T.|||Moras D.|||Muramatsu T.|||Nureki O.|||Ohta T.|||Shimada A.|||Sugiura I.|||Suzuki K.|||Tateno M.|||Ugaji-Yoshikawa Y.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08435 ^@ http://purl.uniprot.org/uniprot/P80377 ^@ 11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245|||9880810 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein.|||Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Kuramitsu S.|||Kyogoku Y.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Wada T.|||Weixlbaumer A.|||Wimberly B.T.|||Yamazaki T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS01915 ^@ http://purl.uniprot.org/uniprot/Q9LCX2 ^@ 10913601 ^@ FEBS Lett. ^@ The heterotrimeric Thermus thermophilus Asp-tRNA(Asn) amidotransferase can also generate Gln-tRNA(Gln). ^@ Becker H.D.|||Jacobi C.|||Kern D.|||Klein S.|||Min B.|||Pelaschier J.|||Raczniak G.|||Roy H.|||Soell D.
http://togogenome.org/gene/300852:TTH_RS05250 ^@ http://purl.uniprot.org/uniprot/P60490 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS08560 ^@ http://purl.uniprot.org/uniprot/Q5SHN8 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS10780 ^@ http://purl.uniprot.org/uniprot/Q53W17 ^@ 26763118|||28663439|||28722012 ^@ Nature|||RNA|||Science ^@ A cyclic oligonucleotide signaling pathway in type III CRISPR-Cas systems.|||Structural basis for the endoribonuclease activity of the type III-A CRISPR-associated protein Csm6.|||Type III CRISPR-Cas systems produce cyclic oligoadenylate second messengers. ^@ Berk C.|||Bigler L.|||Garcia-Doval C.|||Hall J.|||Jinek M.|||Kazlauskiene M.|||Kostiuk G.|||Marraffini L.A.|||Niewoehner O.|||Rostoel J.T.|||Schwede F.|||Siksnys V.|||Tamulaitis G.|||Venclovas C.
http://togogenome.org/gene/300852:TTH_RS10970 ^@ http://purl.uniprot.org/uniprot/Q53WG9 ^@ 16672237|||21572442|||21572444 ^@ Nat. Struct. Mol. Biol.|||Protein Sci. ^@ An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3.|||Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain.|||Recognition and maturation of effector RNAs in a CRISPR interference pathway. ^@ Doudna J.A.|||Ebihara A.|||Garside E.L.|||George M.M.|||Gesner E.M.|||Jinek M.|||Kuramitsu S.|||Macmillan A.M.|||Masui R.|||Sashital D.G.|||Schellenberg M.J.|||Tanaka I.|||Yao M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01275 ^@ http://purl.uniprot.org/uniprot/Q5SLP9 ^@ 12368464 ^@ Microbiology ^@ Identification and characterization of single-stranded-DNA-binding proteins from Thermus thermophilus and Thermus aquaticus -- new arrangement of binding domains. ^@ Brillowska-Dabrowska A.|||Dabrowski S.|||Konopa G.|||Kur J.|||Olszewski M.|||Piatek R.
http://togogenome.org/gene/300852:TTH_RS10400 ^@ http://purl.uniprot.org/uniprot/Q53W80 ^@ 32866452 ^@ J Mol Biol|||J. Mol. Biol. ^@ Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers. ^@ Chandravanshi M.|||Kanaujia S.P.|||Samanta R.
http://togogenome.org/gene/300852:TTH_RS02780 ^@ http://purl.uniprot.org/uniprot/Q5SKW0 ^@ 18667428 ^@ J Biol Chem|||J. Biol. Chem. ^@ Crystal structure of the Thermus thermophilus 16 S rRNA methyltransferase RsmC in complex with cofactor and substrate guanosine. ^@ Dahlberg A.E.|||Demirci H.|||Gregory S.T.|||Jogl G.
http://togogenome.org/gene/300852:TTH_RS03775 ^@ http://purl.uniprot.org/uniprot/Q5SMF6 ^@ 23106124 ^@ Mol. Microbiol. ^@ The fungal alpha-aminoadipate pathway for lysine biosynthesis requires two enzymes of the aconitase family for the isomerization of homocitrate to homoisocitrate. ^@ Brock M.|||Fazius F.|||Gebhardt P.|||Shelest E.
http://togogenome.org/gene/300852:TTH_RS04675 ^@ http://purl.uniprot.org/uniprot/Q5SJV1 ^@ 17996707 ^@ Mol. Cell ^@ Structural aspects of RbfA action during small ribosomal subunit assembly. ^@ Agrawal R.K.|||Booth T.M.|||Datta P.P.|||Fucini P.|||Kaminishi T.|||Kawazoe M.|||Sharma M.R.|||Swami N.K.|||Takemoto C.|||Wilson D.N.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS08130 ^@ http://purl.uniprot.org/uniprot/Q5SHX4 ^@ 19322824 ^@ Proteins ^@ Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8. ^@ Kuramitsu S.|||Masui R.|||Nakagawa N.|||Tomoike F.|||Wakamatsu T.
http://togogenome.org/gene/300852:TTH_RS04885 ^@ http://purl.uniprot.org/uniprot/Q5SJP7 ^@ 17729270 ^@ Proteins ^@ Crystal structure of the flavin reductase component (hpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity. ^@ Ebihara A.|||Hisano T.|||Iwasaki W.|||Kim S.-H.|||Miki K.
http://togogenome.org/gene/300852:TTH_RS06435 ^@ http://purl.uniprot.org/uniprot/Q5SIU5 ^@ 22212656 ^@ Extremophiles ^@ The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination. ^@ Itaya M.|||Ohtani N.|||Tomita M.
http://togogenome.org/gene/300852:TTH_RS08215 ^@ http://purl.uniprot.org/uniprot/Q5SHV7 ^@ 19407375 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun. ^@ Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8. ^@ Ebihara A.|||Kameda Y.|||Nagata K.|||Nakagawa N.|||Ohtsuka J.|||Okada A.|||Tanokura M.|||Yamamura A.
http://togogenome.org/gene/300852:TTH_RS09595 ^@ http://purl.uniprot.org/uniprot/Q56243 ^@ 10518516|||10578047|||8621636 ^@ J. Biochem.|||J. Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A. ^@ ATPase activity of UvrB protein form Thermus thermophilus HB8 and its interaction with DNA.|||Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair.|||Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus. ^@ Deisenhofer J.|||Fukuyama K.|||Henry L.|||Kato R.|||Kito K.|||Kuramitsu S.|||Machius M.|||Masui R.|||Nakagawa N.|||Palnitkar M.|||Sugahara M.|||Yamamoto N.
http://togogenome.org/gene/300852:TTH_RS00485 ^@ http://purl.uniprot.org/uniprot/Q56225 ^@ 9020134 ^@ J. Biol. Chem. ^@ The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Chu S.S.|||Ohnishi T.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS08705 ^@ http://purl.uniprot.org/uniprot/Q5SHL2 ^@ 19262674|||30938016 ^@ Angew Chem Int Ed Engl|||Angew. Chem. Int. Ed.|||Nature ^@ High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.|||Protein structure determination in living cells by in-cell NMR spectroscopy. ^@ Guntert P.|||Hamatsu J.|||Hanashima T.|||Hayashi N.|||Ikeya T.|||Ito Y.|||Kamoshida H.|||Mikawa T.|||Mishima M.|||Sakakibara D.|||Sasaki A.|||Shirakawa M.|||Smith B.O.|||Suemoto Y.|||Tanaka T.|||Walchli M.|||Yoshimasu M.
http://togogenome.org/gene/300852:TTH_RS00880 ^@ http://purl.uniprot.org/uniprot/Q5SLX6 ^@ 23408580 ^@ Proteins ^@ Structure and function of a TetR family transcriptional regulator, SbtR, from thermus thermophilus HB8. ^@ Agari Y.|||Kuramitsu S.|||Sakamoto K.|||Shinkai A.|||Yutani K.
http://togogenome.org/gene/300852:TTH_RS07025 ^@ http://purl.uniprot.org/uniprot/Q5SII2 ^@ 20558545 ^@ RNA ^@ Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus. ^@ Cadambi A.|||Demirci H.|||Gregory S.T.|||Hansen T.|||Jogl G.|||Kirpekar F.|||Larsen L.H.|||Rasmussen A.
http://togogenome.org/gene/300852:TTH_RS11240 ^@ http://purl.uniprot.org/uniprot/Q53WI0 ^@ 22316175 ^@ Biochemistry ^@ Protein-protein interactions and substrate channeling in orthologous and chimeric aldolase-dehydrogenase complexes. ^@ Baker P.|||Carere J.|||Hillis C.|||Seah S.Y.
http://togogenome.org/gene/300852:TTH_RS06690 ^@ http://purl.uniprot.org/uniprot/Q5SIP8 ^@ 24108189 ^@ J Biochem|||J. Biochem. ^@ Structures and reaction mechanisms of the two related enzymes, PurN and PurU. ^@ Baba S.|||Ebihara A.|||Fujiwara S.|||Fukai Y.|||Kanagawa M.|||Kawai G.|||Kawai H.|||Kuramitsu S.|||Kusano M.|||Mitsui S.|||Nakagawa N.|||Sampei G.|||Shimasaki T.|||Suzuki S.|||Taka H.|||Terao K.|||Yanagida Y.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01905 ^@ http://purl.uniprot.org/uniprot/Q5SLC9 ^@ 27667690|||29717025|||30232337 ^@ Biochem. J.|||Sci. Rep.|||Structure ^@ Crystal Structure of a Type IV Pilus Assembly ATPase: Insights into the Molecular Mechanism of PilB from Thermus thermophilus.|||Structural cycle of the Thermus thermophilus PilF ATPase: the powering of type IVa pilus assembly.|||The type IV pilus assembly motor PilB is a robust hexameric ATPase with complex kinetics. ^@ Black W.P.|||Collins R.|||Dajani R.|||Derrick J.P.|||Karuppiah V.|||Mancl J.M.|||Robinson H.|||Schubot F.D.|||Siebert C.A.|||Sukmana A.|||Thistlethwaite A.|||Yang Z.
http://togogenome.org/gene/300852:TTH_RS01875 ^@ http://purl.uniprot.org/uniprot/Q5SLD7 ^@ 31608555 ^@ FEBS J|||FEBS J. ^@ Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter. ^@ Chandravanshi M.|||Gogoi P.|||Kanaujia S.P.
http://togogenome.org/gene/300852:TTH_RS09205 ^@ http://purl.uniprot.org/uniprot/Q8RQE9 ^@ 12198314 ^@ Acta Crystallogr. D ^@ Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme from Thermus thermophilus. ^@ Borukhov S.|||Inoue Y.|||Kuramitsu S.|||Laptenko O.|||Lee J.|||Sekine S.I.|||Shibata T.|||Vassylyev D.G.|||Vassylyeva M.N.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS06185 ^@ http://purl.uniprot.org/uniprot/Q5SIZ5 ^@ 27612581 ^@ J Struct Biol|||J. Struct. Biol. ^@ Structures of type IV pilins from Thermus thermophilus demonstrate similarities with type II secretion system pseudopilins. ^@ Derrick J.P.|||Karuppiah V.|||Thistlethwaite A.
http://togogenome.org/gene/300852:TTH_RS07880 ^@ http://purl.uniprot.org/uniprot/P29253 ^@ 1315754|||1653414|||8385228 ^@ J. Biol. Chem.|||J. Mol. Biol.|||Nucleic Acids Res. ^@ Crystal structure of ribonuclease H from Thermus thermophilus HB8 refined at 2.8-A resolution.|||Expression, purification, and characterization of a recombinant ribonuclease H from Thermus thermophilus HB8.|||Molecular cloning of a ribonuclease H (RNase HI) gene from an extreme thermophile Thermus thermophilus HB8: a thermostable RNase H can functionally replace the Escherichia coli enzyme in vivo. ^@ Ishikawa K.|||Itaya M.|||Kanaya S.|||Katayanagi K.|||Kimura S.|||Kondo K.|||Morikawa K.|||Nakamura H.|||Okumura M.
http://togogenome.org/gene/300852:TTH_RS10835 ^@ http://purl.uniprot.org/uniprot/Q53W05 ^@ 19173314 ^@ Proteins ^@ X-ray crystal structure of a CRISPR-associated RAMP module Cmr5 protein from Thermus thermophilus HB8. ^@ Agari K.|||Agari Y.|||Kuramitsu S.|||Sakamoto K.|||Shinkai A.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS00490 ^@ http://purl.uniprot.org/uniprot/Q56226 ^@ 9020134 ^@ J. Biol. Chem. ^@ The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunit. ^@ Chu S.S.|||Ohnishi T.|||Sled' V.D.|||Yagi T.|||Yano T.
http://togogenome.org/gene/300852:TTH_RS03645 ^@ http://purl.uniprot.org/uniprot/P48514 ^@ 9242984 ^@ Biochimie ^@ Organization of the Thermus thermophilus nusA/infB operon and overexpression of the infB gene in Escherichia coli. ^@ Kreutzer R.|||Sprinzl M.|||Vornlocher H.-P.
http://togogenome.org/gene/300852:TTH_RS08475 ^@ http://purl.uniprot.org/uniprot/Q5SHQ5 ^@ 10476960|||10588692|||11007480|||11014182|||11014183|||11163189|||11228145|||11283358|||11296217|||11340196|||11511350|||11866529|||16287167|||16377566|||18988853|||20421507|||7957245 ^@ Cell|||EMBO J.|||Eur. J. Biochem.|||J. Mol. Biol.|||Nature|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of an initiation factor bound to the 30S ribosomal subunit.|||Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.|||Crystal structure of the ribosome at 5.5 A resolution.|||Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.|||Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.|||Recognition of cognate transfer RNA by the 30S ribosomal subunit.|||Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.|||Structure of functionally activated small ribosomal subunit at 3.3 A resolution.|||Structure of the 30S ribosomal subunit.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome.|||The small ribosomal subunit from Thermus thermophilus at 4.5 A resolution: pattern fittings and the identification of a functional site.|||The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit. ^@ Agmon I.|||Auerbach T.|||Avila H.|||Bartels H.|||Bashan A.|||Baucom A.|||Brodersen D.E.|||Capel M.S.|||Carter A.P.|||Cate J.H.D.|||Choli T.|||Clemons W.M. Jr.|||Dahlberg A.E.|||Dunham C.M.|||Earnest T.N.|||Franceschi F.|||Gluehmann M.|||Gregory S.T.|||Hamburg D.M.|||Hansen H.A.|||Harms J.|||Hartsch T.|||Herfurth E.|||Jacobi C.|||Janell D.|||Jin H.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||May J.L.C.|||McCutcheon J.P.|||Morgan-Warren R.J.|||Murphy F.V.|||Neubauer C.|||Noller H.F.|||Ogle J.M.|||Petry S.|||Pioletti M.|||Ramakrishnan V.|||Schluenzen F.|||Selmer M.|||Suh M.-J.|||Tarry M.J.|||Tocilj A.|||Tsiboli P.|||Vonrhein C.|||Voorhees R.M.|||Weixlbaumer A.|||Wimberly B.T.|||Yonath A.|||Yusupov M.M.|||Yusupova G.Z.|||Zarivach R.
http://togogenome.org/gene/300852:TTH_RS07990 ^@ http://purl.uniprot.org/uniprot/Q5SI02 ^@ 16934832|||17554163 ^@ Acta Crystallogr Sect F Struct Biol Cryst Commun|||Acta Crystallogr. F Struct. Biol. Commun.|||J Mol Biol|||J. Mol. Biol. ^@ Crystal structure of Thermus thermophilus Delta1-pyrroline-5-carboxylate dehydrogenase.|||New insights into the binding mode of coenzymes: structure of Thermus thermophilus Delta1-pyrroline-5-carboxylate dehydrogenase complexed with NADP+. ^@ Babayeva N.D.|||Inagaki E.|||Kato H.|||Kuroishi C.|||Ohshima N.|||Sakamoto K.|||Tahirov T.H.|||Takahashi H.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS09185 ^@ http://purl.uniprot.org/uniprot/Q5SHC1 ^@ 18175319 ^@ Proteins ^@ Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8. ^@ Ebihara A.|||Lee W.C.|||Miyauchi Y.|||Nagata K.|||Okai M.|||Tanokura M.
http://togogenome.org/gene/300852:TTH_RS08255 ^@ http://purl.uniprot.org/uniprot/Q5SHU9 ^@ 17114947 ^@ RNA Biol. ^@ Crystal structure of tRNA pseudouridine synthase TruA from Thermus thermophilus HB8. ^@ Bessho Y.|||Dong X.|||Kuramitsu S.|||Nishimoto M.|||Shibata R.|||Shirouzu M.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS07545 ^@ http://purl.uniprot.org/uniprot/Q56236 ^@ 8663379|||9276481|||9349721 ^@ Biochim. Biophys. Acta|||FEBS Lett.|||J. Biol. Chem. ^@ A novel factor required for the assembly of the DnaK and DnaJ chaperones of Thermus thermophilus.|||Cloning, sequencing, and expression of dnaK-operon proteins from the thermophilic bacterium Thermus thermophilus.|||K+ is an indispensable cofactor for GrpE stimulation of ATPase activity of DnaK/DnaJ complex from Thermus thermophilus. ^@ Endo I.|||Joachimiak A.|||Motohashi K.|||Odaka M.|||Osipiuk J.|||Yohda M.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS07290 ^@ http://purl.uniprot.org/uniprot/Q56242 ^@ 8675016 ^@ Gene ^@ Cloning, sequencing and expression of the uvrA gene from an extremely thermophilic bacterium, Thermus thermophilus HB8. ^@ Kato R.|||Kuramitsu S.|||Yamamoto N.
http://togogenome.org/gene/300852:TTH_RS10945 ^@ http://purl.uniprot.org/uniprot/Q53VY2 ^@ 21775431 ^@ J. Biol. Chem. ^@ Structural and biochemical analysis of nuclease domain of clustered regularly interspaced short palindromic repeat (CRISPR)-associated protein 3 (Cas3). ^@ Bailey S.|||Mulepati S.
http://togogenome.org/gene/300852:TTH_RS00245 ^@ http://purl.uniprot.org/uniprot/Q56232 ^@ 10029535|||11432784|||25070637|||30771275|||8907187 ^@ Biochemistry|||FEBS J.|||J. Biochem.|||Plant Cell ^@ An aspartate aminotransferase from an extremely thermophilic bacterium, Thermus thermophilus HB8.|||Phylobiochemical characterization of class-Ib aspartate/prephenate aminotransferases reveals evolution of the plant arogenate phenylalanine pathway.|||Structure of Thermus thermophilus HB8 aspartate aminotransferase and its complex with maleate.|||Substrate recognition mechanism of thermophilic dual-substrate enzyme.|||Tyrosine metabolism: identification of a key residue in the acquisition of prephenate aminotransferase activity by 1beta aspartate aminotransferase. ^@ Akutsu S.|||Cobessi D.|||Crouzy S.|||Curien G.|||Dornfeld C.|||Dudareva N.|||Giustini C.|||Graindorge M.|||Hirotsu K.|||Jelesko J.G.|||Kato R.|||Kawaguchi S.|||Kuramitsu S.|||Maeda H.A.|||Masui R.|||Matringe M.|||Miyahara I.|||Nakai T.|||Okada K.|||Okamoto A.|||Oshima T.|||Ritesh K.C.|||Robin A.|||Ura H.|||Weisberg A.J.|||Yamagishi A.
http://togogenome.org/gene/300852:TTH_RS08030 ^@ http://purl.uniprot.org/uniprot/Q5SHZ4 ^@ 11850422|||23804759 ^@ J. Biol. Chem.|||Nucleic Acids Res. ^@ An open conformation of the Thermus thermophilus gyrase B ATP-binding domain.|||Structural insight into negative DNA supercoiling by DNA gyrase, a bacterial type 2A DNA topoisomerase. ^@ Batisse C.|||Helye R.|||Hoermann L.|||Jeltsch J.M.|||Lamour V.|||Menetret J.F.|||Moras D.|||Oudet P.|||Papillon J.|||Potier N.|||Schultz P.
http://togogenome.org/gene/300852:TTH_RS07905 ^@ http://purl.uniprot.org/uniprot/Q8RQE7 ^@ 12198314 ^@ Acta Crystallogr. D ^@ Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme from Thermus thermophilus. ^@ Borukhov S.|||Inoue Y.|||Kuramitsu S.|||Laptenko O.|||Lee J.|||Sekine S.I.|||Shibata T.|||Vassylyev D.G.|||Vassylyeva M.N.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01195 ^@ http://purl.uniprot.org/uniprot/Q5SLR3 ^@ 15033367 ^@ J. Mol. Biol. ^@ Ligand-induced conformational changes and a reaction intermediate in branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8, as revealed by X-ray crystallography. ^@ Kamiya N.|||Kuramitsu S.|||Maoka N.|||Masui R.|||Nakagawa N.|||Nakai T.
http://togogenome.org/gene/300852:TTH_RS00095 ^@ http://purl.uniprot.org/uniprot/Q5SMC7 ^@ 22123979|||25902496 ^@ Proc. Natl. Acad. Sci. U.S.A. ^@ Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.|||Molecular basis of dihydrouridine formation on tRNA. ^@ Antson A.A.|||Aziz N.|||Byrne R.T.|||Hirano N.|||Jenkins H.T.|||Kasatsky P.|||Konevega A.L.|||Koonin E.V.|||Nakamura A.|||Peters D.T.|||Rodnina M.V.|||Stowell J.|||Suzuki T.|||Suzuki T.'|||Tanaka I.|||Tanaka Y.|||Whelan F.|||Yamashita K.|||Yao M.|||Yu F.
http://togogenome.org/gene/300852:TTH_RS10500 ^@ http://purl.uniprot.org/uniprot/P61497 ^@ 11707580|||15169780|||15721603 ^@ Biochim. Biophys. Acta|||J. Biol. Chem.|||Proc. Natl. Acad. Sci. U.S.A. ^@ Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.|||Investigation of the cyclobutane pyrimidine dimer (CPD) photolyase DNA recognition mechanism by NMR analyses.|||Light-driven enzymatic catalysis of DNA repair: a review of recent biophysical studies on photolyase. ^@ Hitomi K.|||Inoue Y.|||Iwai S.|||Komori H.|||Kuramitsu S.|||Masui R.|||Miki K.|||Morikawa K.|||Shibata T.|||Shimada I.|||Todo T.|||Torizawa T.|||Ueda T.|||Weber S.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS10755 ^@ http://purl.uniprot.org/uniprot/Q53W19 ^@ 28663439|||28722012 ^@ Nature|||Science ^@ A cyclic oligonucleotide signaling pathway in type III CRISPR-Cas systems.|||Type III CRISPR-Cas systems produce cyclic oligoadenylate second messengers. ^@ Berk C.|||Bigler L.|||Garcia-Doval C.|||Hall J.|||Jinek M.|||Kazlauskiene M.|||Kostiuk G.|||Marraffini L.A.|||Niewoehner O.|||Rostoel J.T.|||Schwede F.|||Siksnys V.|||Tamulaitis G.|||Venclovas C.
http://togogenome.org/gene/300852:TTH_RS08710 ^@ http://purl.uniprot.org/uniprot/Q5SHL1 ^@ 20395270 ^@ Microbiology|||Microbiology (Reading) ^@ Structural and functional characterization of the transcriptional repressor CsoR from Thermus thermophilus HB8. ^@ Agari K.|||Agari Y.|||Kuramitsu S.|||Sakamoto K.|||Shinkai A.
http://togogenome.org/gene/300852:TTH_RS08575 ^@ http://purl.uniprot.org/uniprot/Q5SHN5 ^@ 2362824|||2587224|||8070396|||8070397 ^@ EMBO J.|||Nucleic Acids Res. ^@ Nucleotide sequence of the Thermus thermophilus HB8 gene coding for elongation factor G.|||Nucleotide sequence of the Thermus thermophilus HB8 rps12 and rps7 genes coding for the ribosomal proteins S12 and S7.|||The crystal structure of elongation factor G complexed with GDP, at 2.7-A resolution.|||Three-dimensional structure of the ribosomal translocase: elongation factor G from Thermus thermophilus. ^@ Aevarsson A.|||Al-Karadaghi S.|||Brazhnikov E.|||Chirgadze Y.|||Czworkowski J.|||Garber M.|||Liljas A.|||Matvienko N.I.|||Moore P.B.|||Steitz T.A.|||Svensson L.A.|||Vorozheykina D.P.|||Wang J.|||Yakhnin A.V.|||Zheltonosova J.
http://togogenome.org/gene/300852:TTH_RS06450 ^@ http://purl.uniprot.org/uniprot/Q56404 ^@ 10788522|||1836357 ^@ Biochim. Biophys. Acta|||J. Biol. Chem. ^@ Molecular cloning of genes encoding major two subunits of a eubacterial V-type ATPase from Thermus thermophilus.|||V-type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operon. ^@ Date T.|||Denda K.|||Ohkuma S.|||Oshima T.|||Taguchi H.|||Tsutsumi S.|||Wakabayashi T.|||Yasunaga T.|||Yokoyama K.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS08485 ^@ http://purl.uniprot.org/uniprot/P0DOY8 ^@ 11154066|||11283358|||11511350|||16287167|||18988853|||20421507 ^@ Biol. Chem.|||Cell|||Proc. Natl. Acad. Sci. U.S.A.|||Proteomics|||Science ^@ Crystal structure of the ribosome at 5.5 A resolution.|||Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.|||Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.|||Insights into translational termination from the structure of RF2 bound to the ribosome.|||Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.|||The path of messenger RNA through the ribosome. ^@ Anagnostopoulos K.|||Baucom A.|||Cate J.H.D.|||Choli-Papadopoulou T.|||Dahlberg A.E.|||Earnest T.N.|||Gregory S.T.|||Hamburg D.M.|||Jin H.|||Katsani K.R.|||Kelley A.C.|||Lieberman K.|||Limbach P.A.|||Loakes D.|||Neubauer C.|||Noller H.F.|||Petry S.|||Ramakrishnan V.|||Suh M.-J.|||Tsiboli P.|||Urlaub H.|||Voorhees R.M.|||Weixlbaumer A.|||Yusupov M.M.|||Yusupova G.Z.
http://togogenome.org/gene/300852:TTH_RS06445 ^@ http://purl.uniprot.org/uniprot/O87880 ^@ 10788522 ^@ J. Biol. Chem. ^@ V-type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operon. ^@ Ohkuma S.|||Taguchi H.|||Wakabayashi T.|||Yasunaga T.|||Yokoyama K.|||Yoshida M.
http://togogenome.org/gene/300852:TTH_RS09620 ^@ http://purl.uniprot.org/uniprot/Q5SH33 ^@ 16245325 ^@ Proteins ^@ Crystal structure of the small form of glucose-inhibited division protein A from Thermus thermophilus HB8. ^@ Iwasaki W.|||Miki K.|||Miyatake H.
http://togogenome.org/gene/300852:TTH_RS04485 ^@ http://purl.uniprot.org/uniprot/Q5SJY4 ^@ 24870237|||26174163 ^@ Nature|||Protein Sci|||Protein Sci. ^@ Accurate design of co-assembling multi-component protein nanomaterials.|||Structure of a designed tetrahedral protein assembly variant engineered to have improved soluble expression. ^@ Baker D.|||Bale J.B.|||Cascio D.|||Gonen S.|||Gonen T.|||King N.P.|||Liu Y.|||McNamara D.E.|||Park R.U.|||Sheffler W.|||Yeates T.O.
http://togogenome.org/gene/300852:TTH_RS08685 ^@ http://purl.uniprot.org/uniprot/Q5SHL6 ^@ 15965735 ^@ J. Struct. Funct. Genomics ^@ Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8. ^@ Ebihara A.|||Kousumi Y.|||Kuramitsu S.|||Masui R.|||Okamoto A.|||Ueyama N.|||Yamamoto H.|||Yokoyama S.
http://togogenome.org/gene/300852:TTH_RS01435 ^@ http://purl.uniprot.org/uniprot/Q5SLM2 ^@ 1682319|||8543569 ^@ J. Biochem.|||J. Biol. Chem. ^@ A chaperonin from a thermophilic bacterium, Thermus thermophilus, that controls refoldings of several thermophilic enzymes.|||Molecular cloning, expression, and characterization of chaperonin-60 and chaperonin-10 from a thermophilic bacterium, Thermus thermophilus HB8. ^@ Amada K.|||Endo I.|||Ishii N.|||Konishi J.|||Odaka M.|||Taguchi H.|||Yohda M.|||Yoshida M.