http://togogenome.org/gene/1870820:BBD41_RS22575 ^@ http://purl.uniprot.org/uniprot/A0A1B2E549 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS05230 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWG3 ^@ Caution|||Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. RlmN family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.|||Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. http://togogenome.org/gene/1870820:BBD41_RS04700 ^@ http://purl.uniprot.org/uniprot/A0A1B2DW66 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the elongation factor P family.|||Cytoplasm|||Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. http://togogenome.org/gene/1870820:BBD41_RS17450 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2I1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL1 family.|||Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.|||Part of the 50S ribosomal subunit.|||Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA. http://togogenome.org/gene/1870820:BBD41_RS13345 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0P6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS17555 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2U1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS17 family.|||One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/1870820:BBD41_RS07330 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXF6 ^@ Similarity ^@ Belongs to the UPF0758 family. http://togogenome.org/gene/1870820:BBD41_RS17520 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2J0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL23 family.|||One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.|||Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome. http://togogenome.org/gene/1870820:BBD41_RS13025 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0F2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SecG family.|||Cell membrane|||Involved in protein export. Participates in an early event of protein translocation.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS15915 ^@ http://purl.uniprot.org/uniprot/A0A1B2E1P9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Forms a complex with TatC.|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. http://togogenome.org/gene/1870820:BBD41_RS13950 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0L8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the glutaminase PdxT/SNO family.|||Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.|||In the presence of PdxS, forms a dodecamer of heterodimers. Only shows activity in the heterodimer. http://togogenome.org/gene/1870820:BBD41_RS25060 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6E8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NusA family.|||Cytoplasm|||Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.|||Participates in both transcription termination and antitermination. http://togogenome.org/gene/1870820:BBD41_RS17525 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2P4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL2 family.|||Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.|||One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome. http://togogenome.org/gene/1870820:BBD41_RS04435 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVZ3 ^@ Function|||Similarity ^@ Belongs to the anti-sigma-factor antagonist family.|||In the phosphorylated form it could act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma f from inhibition. http://togogenome.org/gene/1870820:BBD41_RS06200 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWU9 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS21 family. http://togogenome.org/gene/1870820:BBD41_RS27105 ^@ http://purl.uniprot.org/uniprot/A0A1B2E7G0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS03080 ^@ http://purl.uniprot.org/uniprot/A0A1B2DV87 ^@ Function|||Similarity|||Subunit ^@ Belongs to the peptidase S24 family.|||Homodimer.|||Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. http://togogenome.org/gene/1870820:BBD41_RS18195 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2Z8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS13890 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0S5 ^@ Similarity ^@ Belongs to the pterin-4-alpha-carbinolamine dehydratase family. http://togogenome.org/gene/1870820:BBD41_RS17560 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2K8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL14 family.|||Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8. http://togogenome.org/gene/1870820:BBD41_RS16630 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2C8 ^@ Function|||Similarity ^@ Belongs to the glycosyltransferase 26 family. TagA/TarA subfamily.|||Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. http://togogenome.org/gene/1870820:BBD41_RS24605 ^@ http://purl.uniprot.org/uniprot/A0A1B2E642 ^@ Function|||Similarity ^@ Belongs to the UPF0122 family.|||Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. http://togogenome.org/gene/1870820:BBD41_RS07440 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXF1 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspG family.|||Binds 1 [4Fe-4S] cluster.|||Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. http://togogenome.org/gene/1870820:BBD41_RS06275 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWV2 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DnaJ family.|||Binds 2 Zn(2+) ions per monomer.|||Cytoplasm|||Homodimer.|||Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.|||The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity. http://togogenome.org/gene/1870820:BBD41_RS17550 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2K1 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL29 family. http://togogenome.org/gene/1870820:BBD41_RS06805 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX98 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS10530 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZ03 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS12855 ^@ http://purl.uniprot.org/uniprot/A0A1B2E064 ^@ Similarity ^@ Belongs to the CpsD/CapB family. http://togogenome.org/gene/1870820:BBD41_RS17000 ^@ http://purl.uniprot.org/uniprot/A0A1B2E293 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS16545 ^@ http://purl.uniprot.org/uniprot/A0A1B2E268 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase gamma chain family.|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. http://togogenome.org/gene/1870820:BBD41_RS01885 ^@ http://purl.uniprot.org/uniprot/A0A1B2DUN5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS16450 ^@ http://purl.uniprot.org/uniprot/A0A1B2E224 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the prokaryotic/mitochondrial release factor family.|||Cytoplasm|||Methylated by PrmC. Methylation increases the termination efficiency of RF1.|||Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. http://togogenome.org/gene/1870820:BBD41_RS17340 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2G1 ^@ Similarity ^@ Belongs to the CtsR family. http://togogenome.org/gene/1870820:BBD41_RS24090 ^@ http://purl.uniprot.org/uniprot/A0A1B2E5X0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS04635 ^@ http://purl.uniprot.org/uniprot/A0A1B2DW20 ^@ Similarity ^@ Belongs to the asp23 family. http://togogenome.org/gene/1870820:BBD41_RS16790 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2F6 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS05355 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWF5 ^@ Similarity ^@ Belongs to the asp23 family. http://togogenome.org/gene/1870820:BBD41_RS13390 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0D6 ^@ Function|||Similarity ^@ Belongs to the WhiA family.|||Involved in cell division and chromosome segregation. http://togogenome.org/gene/1870820:BBD41_RS17590 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2T8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL18 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.|||This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. http://togogenome.org/gene/1870820:BBD41_RS04920 ^@ http://purl.uniprot.org/uniprot/A0A1B2DW79 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS07410 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXE2 ^@ Cofactor|||Function|||PTM|||Similarity|||Subunit ^@ Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.|||Heterotetramer of two alpha and two beta chains arranged as a dimer of alpha/beta heterodimers.|||Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain. http://togogenome.org/gene/1870820:BBD41_RS27140 ^@ http://purl.uniprot.org/uniprot/A0A1B2E7E7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS14200 ^@ http://purl.uniprot.org/uniprot/A0A1B2E100 ^@ Similarity ^@ Belongs to the alpha/beta-type SASP family. http://togogenome.org/gene/1870820:BBD41_RS06800 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX62 ^@ Function|||Subcellular Location Annotation ^@ Cytoplasm|||General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain. http://togogenome.org/gene/1870820:BBD41_RS16515 ^@ http://purl.uniprot.org/uniprot/A0A1B2E227 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS05615 ^@ http://purl.uniprot.org/uniprot/A0A1B2E8X5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS04020 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVS2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS13285 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0B8 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the enolase family.|||Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.|||Cell surface|||Cytoplasm|||Secreted|||The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein. http://togogenome.org/gene/1870820:BBD41_RS03950 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVQ3 ^@ Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanD family.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.|||Cytoplasm|||Heterooctamer of four alpha and four beta subunits.|||Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus. http://togogenome.org/gene/1870820:BBD41_RS23540 ^@ http://purl.uniprot.org/uniprot/A0A1B2E5L1 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/1870820:BBD41_RS26555 ^@ http://purl.uniprot.org/uniprot/A0A1B2E7D6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit C family.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS04185 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVX7 ^@ Function|||Subcellular Location Annotation ^@ ATPase. Has a role at an early stage in the morphogenesis of the spore coat.|||Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS17635 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2R3 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL36 family. http://togogenome.org/gene/1870820:BBD41_RS14400 ^@ http://purl.uniprot.org/uniprot/A0A1B2E108 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the OXA1/ALB3/YidC family.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS18630 ^@ http://purl.uniprot.org/uniprot/A0A1B2E328 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatB/GatE family. GatB subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/1870820:BBD41_RS11455 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZS5 ^@ Similarity ^@ Belongs to the 5'(3')-deoxyribonucleotidase family. http://togogenome.org/gene/1870820:BBD41_RS11555 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZL3 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the ribonucleoside diphosphate reductase small chain family.|||Binds 2 iron ions per subunit.|||Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. http://togogenome.org/gene/1870820:BBD41_RS19805 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3N6 ^@ Function|||Similarity ^@ Belongs to the PemK/MazF family.|||Toxic component of a type II toxin-antitoxin (TA) system. http://togogenome.org/gene/1870820:BBD41_RS02630 ^@ http://purl.uniprot.org/uniprot/A0A1B2DV48 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS07475 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXH1 ^@ Similarity ^@ Belongs to the EamA transporter family. http://togogenome.org/gene/1870820:BBD41_RS17600 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2K4 ^@ Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL30 family.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1870820:BBD41_RS17665 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2W2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL13 family.|||Part of the 50S ribosomal subunit.|||This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. http://togogenome.org/gene/1870820:BBD41_RS12100 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9F3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial solute-binding protein 3 family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS13385 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0J1 ^@ Function|||Subcellular Location Annotation ^@ Cytoplasm|||General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain. http://togogenome.org/gene/1870820:BBD41_RS05955 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWP8 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/1870820:BBD41_RS14185 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0U7 ^@ Function|||Similarity ^@ Belongs to the SpoVG family.|||Could be involved in septation. http://togogenome.org/gene/1870820:BBD41_RS12655 ^@ http://purl.uniprot.org/uniprot/A0A1B2E085 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS13570 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0K4 ^@ Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the HPrK/P family.|||Both phosphorylation and phosphorolysis are carried out by the same active site and suggest a common mechanism for both reactions.|||Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK/P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport: it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion.|||Homohexamer.|||The Walker A ATP-binding motif also binds Pi and PPi. http://togogenome.org/gene/1870820:BBD41_RS20450 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3Z9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.|||Binds 1 Mg(2+) or Mn(2+) ion per subunit.|||Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1870820:BBD41_RS20625 ^@ http://purl.uniprot.org/uniprot/A0A1B2E445 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the radical SAM superfamily. MqnC family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). http://togogenome.org/gene/1870820:BBD41_RS05825 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWM5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SepF family.|||Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.|||Cytoplasm|||Homodimer. Interacts with FtsZ. http://togogenome.org/gene/1870820:BBD41_RS24840 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9Q0 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliG family.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS05415 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWF4 ^@ Function ^@ Global transcriptional regulator of carbon catabolite repression (CCR) and carbon catabolite activation (CCA), which ensures optimal energy usage under diverse conditions. http://togogenome.org/gene/1870820:BBD41_RS06745 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX77 ^@ Similarity ^@ Belongs to the aldolase class II family. AraD/FucA subfamily. http://togogenome.org/gene/1870820:BBD41_RS25145 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6D6 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.|||Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.|||Binds 2 Zn(2+) ions per subunit. It is not clear if Zn(2+) or Mg(2+) is physiologically important.|||Counteracts the endogenous Pycsar antiviral defense system. Phosphodiesterase that enables metal-dependent hydrolysis of host cyclic nucleotide Pycsar defense signals such as cCMP and cUMP.|||Cytoplasm|||Homodimer, may be a subunit of the RNA degradosome. http://togogenome.org/gene/1870820:BBD41_RS05470 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWG1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the 6-phosphogluconate dehydrogenase family.|||Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.|||Homodimer. http://togogenome.org/gene/1870820:BBD41_RS26165 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6Y5 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/1870820:BBD41_RS08060 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXV4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS07275 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXG4 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL27 family. http://togogenome.org/gene/1870820:BBD41_RS16420 ^@ http://purl.uniprot.org/uniprot/A0A1B2E285 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS24015 ^@ http://purl.uniprot.org/uniprot/A0A1B2E5U4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peptidase S14 family.|||Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.|||Cytoplasm|||Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/1870820:BBD41_RS06815 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX69 ^@ Similarity ^@ Belongs to the band 7/mec-2 family. Flotillin subfamily. http://togogenome.org/gene/1870820:BBD41_RS12605 ^@ http://purl.uniprot.org/uniprot/A0A1B2E054 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS05270 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWD8 ^@ Similarity ^@ Belongs to the RemA family. http://togogenome.org/gene/1870820:BBD41_RS20395 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3Y9 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL20 family.|||Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. http://togogenome.org/gene/1870820:BBD41_RS14490 ^@ http://purl.uniprot.org/uniprot/A0A1B2E150 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bS18 family.|||Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6. http://togogenome.org/gene/1870820:BBD41_RS11265 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZH9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome c oxidase subunit 3 family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS10505 ^@ http://purl.uniprot.org/uniprot/A0A1B2DYY7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS04370 ^@ http://purl.uniprot.org/uniprot/A0A1B2E8X6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DMRL synthase family.|||Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.|||Forms an icosahedral capsid composed of 60 subunits, arranged as a dodecamer of pentamers. http://togogenome.org/gene/1870820:BBD41_RS17285 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2G5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS12860 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0B7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS17490 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2I5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS7 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.|||Part of the 30S ribosomal subunit. Contacts proteins S9 and S11. http://togogenome.org/gene/1870820:BBD41_RS20375 ^@ http://purl.uniprot.org/uniprot/A0A1B2E400 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 28 family.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS25975 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6W7 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS04460 ^@ http://purl.uniprot.org/uniprot/A0A1B2DW33 ^@ Similarity ^@ Belongs to the Fur family. http://togogenome.org/gene/1870820:BBD41_RS27150 ^@ http://purl.uniprot.org/uniprot/A0A1B2E7L8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS20520 ^@ http://purl.uniprot.org/uniprot/A0A1B2E489 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0719 family.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS15740 ^@ http://purl.uniprot.org/uniprot/A0A1B2E1W9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ThrE exporter (TC 2.A.79) family.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS17655 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2N3 ^@ Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL17 family.|||Part of the 50S ribosomal subunit. Contacts protein L32. http://togogenome.org/gene/1870820:BBD41_RS13195 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0C3 ^@ Similarity ^@ Belongs to the KdgT transporter family. http://togogenome.org/gene/1870820:BBD41_RS22905 ^@ http://purl.uniprot.org/uniprot/A0A1B2E5A7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS17540 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2J6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS3 family.|||Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.|||Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14. http://togogenome.org/gene/1870820:BBD41_RS14560 ^@ http://purl.uniprot.org/uniprot/A0A1B2E136 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL9 family.|||Binds to the 23S rRNA. http://togogenome.org/gene/1870820:BBD41_RS12070 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZY8 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS17570 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2Q4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL5 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.|||This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. http://togogenome.org/gene/1870820:BBD41_RS24265 ^@ http://purl.uniprot.org/uniprot/A0A1B2E606 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS14125 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0Q8 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/1870820:BBD41_RS17545 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2L3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL16 family.|||Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1870820:BBD41_RS07450 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXE8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peptidase S14 family.|||Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.|||Cytoplasm|||Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/1870820:BBD41_RS17640 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2U8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS13 family.|||Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.|||Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome. http://togogenome.org/gene/1870820:BBD41_RS06925 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX91 ^@ Similarity ^@ Belongs to the UPF0297 family. http://togogenome.org/gene/1870820:BBD41_RS22970 ^@ http://purl.uniprot.org/uniprot/A0A1B2E5C7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS14190 ^@ http://purl.uniprot.org/uniprot/A0A1B2E110 ^@ Similarity ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family. http://togogenome.org/gene/1870820:BBD41_RS25005 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6A7 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS2 family. http://togogenome.org/gene/1870820:BBD41_RS17565 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9M4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL24 family.|||One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.|||One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1870820:BBD41_RS18815 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3E5 ^@ Induction|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SspI family.|||Expressed only in the forespore compartment of sporulating cells.|||Spore core http://togogenome.org/gene/1870820:BBD41_RS26645 ^@ http://purl.uniprot.org/uniprot/A0A1B2E752 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS10355 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZ18 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PurS family.|||Cytoplasm|||Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.|||Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL. http://togogenome.org/gene/1870820:BBD41_RS17485 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2L5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS12 family.|||Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.|||With S4 and S5 plays an important role in translational accuracy. http://togogenome.org/gene/1870820:BBD41_RS17435 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2K3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecE/SEC61-gamma family.|||Cell membrane|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. http://togogenome.org/gene/1870820:BBD41_RS12825 ^@ http://purl.uniprot.org/uniprot/A0A1B2E096 ^@ Subcellular Location Annotation ^@ Membrane|||Nucleus membrane http://togogenome.org/gene/1870820:BBD41_RS17440 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2H7 ^@ Function|||Similarity ^@ Belongs to the NusG family.|||Participates in transcription elongation, termination and antitermination. http://togogenome.org/gene/1870820:BBD41_RS05495 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWK1 ^@ Similarity ^@ Belongs to the UPF0473 family. http://togogenome.org/gene/1870820:BBD41_RS08730 ^@ http://purl.uniprot.org/uniprot/A0A1B2DY21 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS03985 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVQ1 ^@ Function|||Similarity ^@ Belongs to the methylglyoxal synthase family.|||Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. http://togogenome.org/gene/1870820:BBD41_RS17360 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2F9 ^@ Domain|||Function|||Similarity ^@ Belongs to the RecA family. RadA subfamily.|||DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.|||Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.|||The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease. http://togogenome.org/gene/1870820:BBD41_RS19675 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3L6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GroES chaperonin family.|||Cytoplasm|||Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.|||Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. http://togogenome.org/gene/1870820:BBD41_RS26135 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6Y8 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/1870820:BBD41_RS26035 ^@ http://purl.uniprot.org/uniprot/A0A1B2E739 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the SspH family.|||Spore core http://togogenome.org/gene/1870820:BBD41_RS14010 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0U4 ^@ Function|||Similarity ^@ Belongs to the DHNA family.|||Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin. http://togogenome.org/gene/1870820:BBD41_RS17645 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2P8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS11 family.|||Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.|||Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3. http://togogenome.org/gene/1870820:BBD41_RS05960 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWT3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS24615 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9T4 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS16 family. http://togogenome.org/gene/1870820:BBD41_RS20410 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3Y1 ^@ Cofactor|||Similarity ^@ Belongs to the TPP enzyme family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit. http://togogenome.org/gene/1870820:BBD41_RS05365 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWH8 ^@ Similarity ^@ Belongs to the UPF0358 family. http://togogenome.org/gene/1870820:BBD41_RS16800 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2C0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecA family.|||Cell membrane|||Cytoplasm|||Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. http://togogenome.org/gene/1870820:BBD41_RS07445 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXH6 ^@ Function|||Similarity|||Subunit ^@ ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.|||Belongs to the ClpX chaperone family.|||Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/1870820:BBD41_RS02230 ^@ http://purl.uniprot.org/uniprot/A0A1B2DUU4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS05260 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWE0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase subunit omega family.|||Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/1870820:BBD41_RS18100 ^@ http://purl.uniprot.org/uniprot/A0A1B2E330 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS09880 ^@ http://purl.uniprot.org/uniprot/A0A1B2DYT0 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.|||Belongs to the azoreductase type 1 family.|||Binds 1 FMN per subunit.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones. http://togogenome.org/gene/1870820:BBD41_RS20385 ^@ http://purl.uniprot.org/uniprot/A0A1B2E405 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-3 family.|||Cytoplasm|||IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.|||Monomer. http://togogenome.org/gene/1870820:BBD41_RS19990 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3Q7 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the AP endonuclease 2 family.|||Binds 3 Zn(2+) ions.|||Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. http://togogenome.org/gene/1870820:BBD41_RS05845 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWX1 ^@ Function|||Similarity ^@ Belongs to the sigma-70 factor family.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. http://togogenome.org/gene/1870820:BBD41_RS24640 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6D3 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL19 family.|||This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. http://togogenome.org/gene/1870820:BBD41_RS07125 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXA6 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the RuvC family.|||Binds 1 Mg(2+) ion per subunit.|||Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. http://togogenome.org/gene/1870820:BBD41_RS21560 ^@ http://purl.uniprot.org/uniprot/A0A1B2E4T4 ^@ Similarity ^@ Belongs to the glycosyl hydrolase 130 family. http://togogenome.org/gene/1870820:BBD41_RS01950 ^@ http://purl.uniprot.org/uniprot/A0A1B2DUP7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Forms a complex with TatC.|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. http://togogenome.org/gene/1870820:BBD41_RS12550 ^@ http://purl.uniprot.org/uniprot/A0A1B2E003 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the uridine kinase family.|||Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS13175 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0L7 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/1870820:BBD41_RS05200 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWE9 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL28 family. http://togogenome.org/gene/1870820:BBD41_RS16500 ^@ http://purl.uniprot.org/uniprot/A0A1B2E283 ^@ Activity Regulation|||Cofactor|||Function|||Similarity ^@ Allosterically activated by GTP.|||Belongs to the UPRTase family.|||Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.|||Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate. http://togogenome.org/gene/1870820:BBD41_RS17460 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2I8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL12 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.|||Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors. http://togogenome.org/gene/1870820:BBD41_RS10680 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZ25 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0154 family.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS20715 ^@ http://purl.uniprot.org/uniprot/A0A1B2E430 ^@ Similarity ^@ Belongs to the glutamine synthetase family. http://togogenome.org/gene/1870820:BBD41_RS14565 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0Z5 ^@ Function|||Similarity ^@ Belongs to the helicase family. DnaB subfamily.|||Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. http://togogenome.org/gene/1870820:BBD41_RS17400 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9G9 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/1870820:BBD41_RS06915 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXB7 ^@ Similarity ^@ Belongs to the UPF0473 family. http://togogenome.org/gene/1870820:BBD41_RS16870 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2A8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ABC transporter superfamily.|||Cell membrane|||Homodimer. Forms a membrane-associated complex with FtsX.|||Part of the ABC transporter FtsEX involved in cellular division. http://togogenome.org/gene/1870820:BBD41_RS22340 ^@ http://purl.uniprot.org/uniprot/A0A1B2E4Z4 ^@ Function ^@ Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. http://togogenome.org/gene/1870820:BBD41_RS14175 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0S1 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.|||Binds 2 Mg(2+) ions per subunit.|||Cytoplasm|||Homohexamer.|||Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P). http://togogenome.org/gene/1870820:BBD41_RS13990 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0W6 ^@ Function|||Similarity ^@ Belongs to the GreA/GreB family.|||Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. http://togogenome.org/gene/1870820:BBD41_RS17505 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2T0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS10 family.|||Involved in the binding of tRNA to the ribosomes.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/1870820:BBD41_RS21675 ^@ http://purl.uniprot.org/uniprot/A0A1B2E4V1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS18655 ^@ http://purl.uniprot.org/uniprot/A0A1B2E366 ^@ Similarity ^@ Belongs to the Fur family. http://togogenome.org/gene/1870820:BBD41_RS14360 ^@ http://purl.uniprot.org/uniprot/A0A1B2E133 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the DnaA family.|||Cytoplasm|||Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. http://togogenome.org/gene/1870820:BBD41_RS19105 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3D9 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/1870820:BBD41_RS17595 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2N1 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS5 family.|||Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.|||Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.|||The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S4 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/1870820:BBD41_RS19175 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3L4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/1870820:BBD41_RS25100 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6K4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS15 family.|||Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.|||Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA. http://togogenome.org/gene/1870820:BBD41_RS19665 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3T2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Forms a complex with TatC.|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. http://togogenome.org/gene/1870820:BBD41_RS24530 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9Q4 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thiolase-like superfamily. FabH family.|||Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.|||Cytoplasm|||Homodimer.|||The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH. http://togogenome.org/gene/1870820:BBD41_RS10675 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZ47 ^@ Similarity|||Subunit ^@ Belongs to the GTP cyclohydrolase I family.|||Homopolymer. http://togogenome.org/gene/1870820:BBD41_RS20390 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3Z5 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL35 family. http://togogenome.org/gene/1870820:BBD41_RS09005 ^@ http://purl.uniprot.org/uniprot/A0A1B2DY79 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS06400 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX14 ^@ Similarity ^@ Belongs to the CvfB family. http://togogenome.org/gene/1870820:BBD41_RS14480 ^@ http://purl.uniprot.org/uniprot/A0A1B2E154 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS6 family.|||Binds together with S18 to 16S ribosomal RNA. http://togogenome.org/gene/1870820:BBD41_RS22690 ^@ http://purl.uniprot.org/uniprot/A0A1B2E573 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/1870820:BBD41_RS03915 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVT2 ^@ Similarity ^@ Belongs to the AAA ATPase family.|||In the C-terminal section; belongs to the peptidase M41 family. http://togogenome.org/gene/1870820:BBD41_RS17380 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2G7 ^@ Similarity ^@ Belongs to the ycf81 family. http://togogenome.org/gene/1870820:BBD41_RS25905 ^@ http://purl.uniprot.org/uniprot/A0A1B2E702 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoD/SigA subfamily.|||Cytoplasm|||Interacts transiently with the RNA polymerase catalytic core.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. http://togogenome.org/gene/1870820:BBD41_RS13955 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0S8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PdxS/SNZ family.|||Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively.|||In the presence of PdxT, forms a dodecamer of heterodimers. http://togogenome.org/gene/1870820:BBD41_RS24620 ^@ http://purl.uniprot.org/uniprot/A0A1B2E634 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A probable RNA chaperone. Forms a complex with KhpB which binds to cellular RNA and controls its expression. Plays a role in peptidoglycan (PG) homeostasis and cell length regulation.|||Belongs to the KhpA RNA-binding protein family.|||Cytoplasm|||Forms a complex with KhpB. http://togogenome.org/gene/1870820:BBD41_RS25055 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6C5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RimP family.|||Cytoplasm|||Required for maturation of 30S ribosomal subunits. http://togogenome.org/gene/1870820:BBD41_RS17630 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2L6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-1 family.|||Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. http://togogenome.org/gene/1870820:BBD41_RS07050 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX88 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1870820:BBD41_RS04400 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVY6 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/1870820:BBD41_RS07285 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXB8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL21 family.|||Part of the 50S ribosomal subunit. Contacts protein L20.|||This protein binds to 23S rRNA in the presence of protein L20. http://togogenome.org/gene/1870820:BBD41_RS18055 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2T2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PNP/UDP phosphorylase family.|||Catalyzes the reversible phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.|||Homohexamer; trimer of homodimers. http://togogenome.org/gene/1870820:BBD41_RS18780 ^@ http://purl.uniprot.org/uniprot/A0A1B2E352 ^@ Similarity ^@ Belongs to the PspA/IM30 family. http://togogenome.org/gene/1870820:BBD41_RS17685 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2S2 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PAPS reductase family. CysH subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS) using thioredoxin as an electron donor.|||Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS04110 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVT0 ^@ Function|||Subcellular Location Annotation ^@ Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.|||Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS13685 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0U6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.|||Binds 1 zinc ion per subunit.|||Binds the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1870820:BBD41_RS13665 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0H6 ^@ Function|||Similarity ^@ Belongs to the RecR family.|||May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. http://togogenome.org/gene/1870820:BBD41_RS17605 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2M5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL15 family.|||Binds to the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1870820:BBD41_RS19070 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3J1 ^@ Similarity ^@ Belongs to the NADH dehydrogenase family. http://togogenome.org/gene/1870820:BBD41_RS17620 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2L7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.|||Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.|||Monomer.|||Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed. http://togogenome.org/gene/1870820:BBD41_RS17650 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2L2 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase alpha chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.|||The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements. http://togogenome.org/gene/1870820:BBD41_RS16610 ^@ http://purl.uniprot.org/uniprot/A0A1B2E255 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioester dehydratase family. FabZ subfamily.|||Cytoplasm|||Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. http://togogenome.org/gene/1870820:BBD41_RS11395 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZF4 ^@ Similarity ^@ Belongs to the RutC family. http://togogenome.org/gene/1870820:BBD41_RS13885 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9C0 ^@ PTM ^@ Binds 1 heme c group covalently per subunit. http://togogenome.org/gene/1870820:BBD41_RS04180 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVU3 ^@ Similarity ^@ Belongs to the bacterial histone-like protein family. http://togogenome.org/gene/1870820:BBD41_RS10460 ^@ http://purl.uniprot.org/uniprot/A0A1B2DZ40 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS23315 ^@ http://purl.uniprot.org/uniprot/A0A1B2E5I0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS04580 ^@ http://purl.uniprot.org/uniprot/A0A1B2DW21 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ArgR family.|||Cytoplasm|||Regulates arginine biosynthesis genes. http://togogenome.org/gene/1870820:BBD41_RS24545 ^@ http://purl.uniprot.org/uniprot/A0A1B2E630 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.|||4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.|||Belongs to the acyl carrier protein (ACP) family.|||Carrier of the growing fatty acid chain in fatty acid biosynthesis.|||Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS26155 ^@ http://purl.uniprot.org/uniprot/A0A1B2E761 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS20050 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3T1 ^@ Function|||Similarity ^@ Belongs to the nucleoside phosphorylase PpnP family.|||Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. http://togogenome.org/gene/1870820:BBD41_RS19040 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3I1 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the radical SAM superfamily. MqnE family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. http://togogenome.org/gene/1870820:BBD41_RS04740 ^@ http://purl.uniprot.org/uniprot/A0A1B2DW44 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DtxR/MntR family.|||Central regulator of manganese homeostasis.|||Cytoplasm|||DNA binding is strongly activated by Mn(2+).|||Homodimer. http://togogenome.org/gene/1870820:BBD41_RS06520 ^@ http://purl.uniprot.org/uniprot/A0A1B2DX19 ^@ Function|||Similarity ^@ Belongs to the sigma-70 factor family.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. http://togogenome.org/gene/1870820:BBD41_RS24515 ^@ http://purl.uniprot.org/uniprot/A0A1B2E644 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL32 family. http://togogenome.org/gene/1870820:BBD41_RS27440 ^@ http://purl.uniprot.org/uniprot/A0A1B2EA07 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TACO1 family. YeeN subfamily.|||Cytoplasm http://togogenome.org/gene/1870820:BBD41_RS17830 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2R8 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the adenylate cyclase family. DacA/CdaA subfamily.|||Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Probably a homodimer. http://togogenome.org/gene/1870820:BBD41_RS17580 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2K0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS8 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S5 and S12. http://togogenome.org/gene/1870820:BBD41_RS21475 ^@ http://purl.uniprot.org/uniprot/A0A1B2E4J7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS05950 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWZ0 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/1870820:BBD41_RS17005 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2J2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS18095 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2Y9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS13490 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0K9 ^@ Cofactor|||Similarity|||Subunit ^@ Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.|||Binds 1 FAD per subunit.|||Homodimer. http://togogenome.org/gene/1870820:BBD41_RS08520 ^@ http://purl.uniprot.org/uniprot/A0A1B2DY11 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS18065 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2T1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS17445 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2J4 ^@ Function|||PTM|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL11 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.|||One or more lysine residues are methylated.|||Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/1870820:BBD41_RS29365 ^@ http://purl.uniprot.org/uniprot/A0A1B2E8J2 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/1870820:BBD41_RS21010 ^@ http://purl.uniprot.org/uniprot/A0A1B2E4A7 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. Ycf16 family. http://togogenome.org/gene/1870820:BBD41_RS08405 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXW8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS24520 ^@ http://purl.uniprot.org/uniprot/A0A1B2E9W2 ^@ Function|||Similarity ^@ Belongs to the FapR family.|||Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism. http://togogenome.org/gene/1870820:BBD41_RS14895 ^@ http://purl.uniprot.org/uniprot/A0A1B2E196 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS17820 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2T6 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/1870820:BBD41_RS25225 ^@ http://purl.uniprot.org/uniprot/A0A1B2E6F3 ^@ Similarity ^@ Belongs to the UPF0234 family. http://togogenome.org/gene/1870820:BBD41_RS26570 ^@ http://purl.uniprot.org/uniprot/A0A1B2E748 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS16525 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2A5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase C chain family.|||Cell membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1870820:BBD41_RS21910 ^@ http://purl.uniprot.org/uniprot/A0A1B2E4Z0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS16445 ^@ http://purl.uniprot.org/uniprot/A0A1B2E274 ^@ Function|||Similarity ^@ ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily. http://togogenome.org/gene/1870820:BBD41_RS15865 ^@ http://purl.uniprot.org/uniprot/A0A1B2E1P3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1870820:BBD41_RS19680 ^@ http://purl.uniprot.org/uniprot/A0A1B2E3M2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the chaperonin (HSP60) family.|||Cytoplasm|||Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. http://togogenome.org/gene/1870820:BBD41_RS05440 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWF7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS13015 ^@ http://purl.uniprot.org/uniprot/A0A1B2E0G4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SmpB family.|||Cytoplasm|||Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation. http://togogenome.org/gene/1870820:BBD41_RS16540 ^@ http://purl.uniprot.org/uniprot/A0A1B2E209 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase alpha/beta chains family.|||Cell membrane|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. http://togogenome.org/gene/1870820:BBD41_RS06330 ^@ http://purl.uniprot.org/uniprot/A0A1B2DWY7 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS20 family.|||Binds directly to 16S ribosomal RNA. http://togogenome.org/gene/1870820:BBD41_RS21335 ^@ http://purl.uniprot.org/uniprot/A0A1B2E4G2 ^@ Similarity ^@ Belongs to the alpha/beta-type SASP family. http://togogenome.org/gene/1870820:BBD41_RS08075 ^@ http://purl.uniprot.org/uniprot/A0A1B2DXW3 ^@ Cofactor|||Similarity ^@ Belongs to the glycosyl hydrolase 4 family.|||Binds 1 NAD(+) per subunit. http://togogenome.org/gene/1870820:BBD41_RS03085 ^@ http://purl.uniprot.org/uniprot/A0A1B2DVD4 ^@ Similarity ^@ Belongs to the sulfur carrier protein TusA family. http://togogenome.org/gene/1870820:BBD41_RS16635 ^@ http://purl.uniprot.org/uniprot/A0A1B2E232 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1870820:BBD41_RS17530 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2S7 ^@ Function|||Similarity ^@ Belongs to the universal ribosomal protein uS19 family.|||Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. http://togogenome.org/gene/1870820:BBD41_RS17670 ^@ http://purl.uniprot.org/uniprot/A0A1B2E2M6 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS9 family. http://togogenome.org/gene/1870820:BBD41_RS27100 ^@ http://purl.uniprot.org/uniprot/A0A1B2E7L1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane