http://togogenome.org/gene/1193502:SHALO_RS00765 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG29 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0056 (MarC) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12165 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.|||Binds 1 zinc ion per subunit.|||Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.|||Part of the 30S ribosomal subunit. Contacts proteins S3 and S10. http://togogenome.org/gene/1193502:SHALO_RS02800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH40 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TrpA family.|||Tetramer of two alpha and two beta chains.|||The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. http://togogenome.org/gene/1193502:SHALO_RS07250 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJL6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DapA family.|||Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).|||Cytoplasm|||Homotetramer; dimer of dimers.|||Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB. http://togogenome.org/gene/1193502:SHALO_RS07440 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJS1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the R-transferase family. Bpt subfamily.|||Cytoplasm|||Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. http://togogenome.org/gene/1193502:SHALO_RS06195 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ52 ^@ Similarity ^@ Belongs to the class-D beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS08390 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKA4 ^@ Similarity ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. http://togogenome.org/gene/1193502:SHALO_RS14150 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNS4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS01315 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGD2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliF family.|||Membrane|||The M ring may be actively involved in energy transduction. http://togogenome.org/gene/1193502:SHALO_RS04215 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI53 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TrkH potassium transport family.|||Cell inner membrane|||Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01670 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGK4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the DHBP synthase family.|||Binds 2 divalent metal cations per subunit. Magnesium or manganese.|||Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS13030 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMY5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04515 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI47 ^@ Similarity ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. http://togogenome.org/gene/1193502:SHALO_RS01890 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGQ0 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11480 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM20 ^@ Function|||Similarity|||Subunit ^@ Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.|||Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS00300 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFT4 ^@ Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS11405 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM17 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).|||Belongs to the AccA family.|||Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS13395 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN58 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane http://togogenome.org/gene/1193502:SHALO_RS10110 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLB9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.|||Belongs to the CsrA/RsmA family.|||Cytoplasm|||Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core. http://togogenome.org/gene/1193502:SHALO_RS06815 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJC6 ^@ Function|||Similarity ^@ Belongs to the phenylacetyl-CoA ligase family.|||Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). http://togogenome.org/gene/1193502:SHALO_RS05745 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ09 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the P-Pant transferase superfamily. AcpS family.|||Cytoplasm|||Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein. http://togogenome.org/gene/1193502:SHALO_RS01180 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGG8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cytoplasm|||Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.|||Forms polymers. http://togogenome.org/gene/1193502:SHALO_RS15145 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP49 ^@ Function|||Similarity ^@ Belongs to the FlgD family.|||Required for flagellar hook formation. May act as a scaffolding protein. http://togogenome.org/gene/1193502:SHALO_RS07385 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJR7 ^@ Similarity ^@ Belongs to the ClpX chaperone family. HslU subfamily. http://togogenome.org/gene/1193502:SHALO_RS07515 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJU4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the DHBP synthase family.|||Binds 2 divalent metal cations per subunit. Magnesium or manganese.|||Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.|||Homodimer.|||In the C-terminal section; belongs to the GTP cyclohydrolase II family.|||In the N-terminal section; belongs to the DHBP synthase family. http://togogenome.org/gene/1193502:SHALO_RS05625 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIU5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.|||Belongs to the FliW family.|||Cytoplasm|||Interacts with translational regulator CsrA and flagellin(s). http://togogenome.org/gene/1193502:SHALO_RS15115 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP46 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS01295 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGB3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS02610 ^@ http://purl.uniprot.org/uniprot/A0A1D7THI7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 3 family.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS07265 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJL5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS09790 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL82 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the sigma-70 factor family. RpoD/SigA subfamily.|||Cytoplasm|||Interacts transiently with the RNA polymerase catalytic core.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. http://togogenome.org/gene/1193502:SHALO_RS00540 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFW5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. http://togogenome.org/gene/1193502:SHALO_RS01740 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGS7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS03620 ^@ http://purl.uniprot.org/uniprot/A0A1D7THJ1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS12810 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMV4 ^@ Function|||Similarity ^@ Belongs to the flavodoxin family.|||Low-potential electron donor to a number of redox enzymes. http://togogenome.org/gene/1193502:SHALO_RS09080 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKQ1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the DsbB family. BdbC subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14545 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNV8 ^@ Function|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.|||This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. http://togogenome.org/gene/1193502:SHALO_RS12425 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMT9 ^@ Similarity ^@ Belongs to the 5'-nucleotidase family. http://togogenome.org/gene/1193502:SHALO_RS12320 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMS2 ^@ Similarity ^@ Belongs to the hcp beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS04555 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI67 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome c-552 family.|||Binds 1 Ca(2+) ion per monomer.|||Binds 5 heme c groups covalently per monomer.|||Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS08660 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKP8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. Cx-SAM synthase family.|||Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS06250 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ48 ^@ Similarity ^@ Belongs to the PhzF family. http://togogenome.org/gene/1193502:SHALO_RS03530 ^@ http://purl.uniprot.org/uniprot/A0A1D7THM4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA methyltransferase RlmH family.|||Cytoplasm|||Homodimer.|||Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA. http://togogenome.org/gene/1193502:SHALO_RS02280 ^@ http://purl.uniprot.org/uniprot/A0A1D7THC4 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/1193502:SHALO_RS13425 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN76 ^@ Similarity ^@ Belongs to the UPF0166 family. http://togogenome.org/gene/1193502:SHALO_RS02875 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH91 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Fur family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS06105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIY6 ^@ Similarity ^@ Belongs to the NifX/NifY family. http://togogenome.org/gene/1193502:SHALO_RS05350 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIM4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS10060 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLA9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the YajC family.|||Cell inner membrane|||Membrane|||Part of the SecDF-YidC-YajC translocase complex. The SecDF-YidC-YajC translocase forms a supercomplex with SecYEG, called the holo-translocon (HTL).|||The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. http://togogenome.org/gene/1193502:SHALO_RS01170 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG76 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the transferase hexapeptide repeat family. LpxA subfamily.|||Cytoplasm|||Homotrimer.|||Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. http://togogenome.org/gene/1193502:SHALO_RS11790 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM97 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the QueC family.|||Binds 1 zinc ion per subunit.|||Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). http://togogenome.org/gene/1193502:SHALO_RS07160 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJK5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase alpha subunit family.|||Heterotetramer of two alpha and two beta subunits.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. http://togogenome.org/gene/1193502:SHALO_RS14250 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNN1 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/1193502:SHALO_RS12620 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMX7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane http://togogenome.org/gene/1193502:SHALO_RS10150 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLD3 ^@ Similarity ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. http://togogenome.org/gene/1193502:SHALO_RS04250 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI18 ^@ Caution|||Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.|||Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00810 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG34 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/1193502:SHALO_RS12005 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMD2 ^@ Similarity|||Subunit ^@ Belongs to the CarA family.|||Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate. http://togogenome.org/gene/1193502:SHALO_RS03880 ^@ http://purl.uniprot.org/uniprot/A0A1D7THQ2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase C chain family.|||Cell membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLT6 ^@ Similarity ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. http://togogenome.org/gene/1193502:SHALO_RS08505 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKD5 ^@ Function|||Similarity ^@ Belongs to the ketopantoate reductase family.|||Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. http://togogenome.org/gene/1193502:SHALO_RS00470 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFX2 ^@ Similarity ^@ Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS03750 ^@ http://purl.uniprot.org/uniprot/A0A1D7THL6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SHMT family.|||Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS07675 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJX2 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS01265 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGB9 ^@ Similarity ^@ Belongs to the methylenetetrahydrofolate reductase family. http://togogenome.org/gene/1193502:SHALO_RS01350 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGD4 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Fur family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS13350 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN73 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS06555 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ75 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06400 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ88 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the NifD/NifK/NifE/NifN family.|||Binds 1 [8Fe-7S] cluster per heterodimer.|||Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2).|||This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. http://togogenome.org/gene/1193502:SHALO_RS04610 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI41 ^@ Similarity ^@ Belongs to the site-specific recombinase resolvase family. http://togogenome.org/gene/1193502:SHALO_RS01090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG65 ^@ Similarity ^@ Belongs to the UPF0102 family. http://togogenome.org/gene/1193502:SHALO_RS11175 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLW4 ^@ Function|||Similarity ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. Fucose synthase subfamily.|||Catalyzes the two-step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. http://togogenome.org/gene/1193502:SHALO_RS03610 ^@ http://purl.uniprot.org/uniprot/A0A1D7THM2 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the ThiC family.|||Binds 1 [4Fe-4S] cluster per subunit. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS13710 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNE7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MerT family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS10365 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLF6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ferrochelatase family.|||Catalyzes the ferrous insertion into protoporphyrin IX.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS08520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKE0 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the class II fructose-bisphosphate aldolase family.|||Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.|||Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. http://togogenome.org/gene/1193502:SHALO_RS14350 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNR0 ^@ Similarity ^@ Belongs to the trans-sulfuration enzymes family. http://togogenome.org/gene/1193502:SHALO_RS04925 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIE6 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/1193502:SHALO_RS03150 ^@ http://purl.uniprot.org/uniprot/A0A1D7THA5 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS12795 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMV7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NiCoT transporter (TC 2.A.52) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11015 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLT1 ^@ Function|||Similarity|||Subunit ^@ Associates with the 50S ribosomal subunit.|||Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.|||GTPase that plays an essential role in the late steps of ribosome biogenesis. http://togogenome.org/gene/1193502:SHALO_RS02455 ^@ http://purl.uniprot.org/uniprot/A0A1D7THF6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.|||Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS04060 ^@ http://purl.uniprot.org/uniprot/A0A1D7THS9 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/1193502:SHALO_RS00085 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFW2 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the aconitase/IPM isomerase family. LeuC type 2 subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/1193502:SHALO_RS07650 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK55 ^@ Similarity ^@ Belongs to the CobH/CbiC family. http://togogenome.org/gene/1193502:SHALO_RS04080 ^@ http://purl.uniprot.org/uniprot/A0A1D7THZ3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the elongation factor P family.|||Cytoplasm|||Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. http://togogenome.org/gene/1193502:SHALO_RS10455 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLH4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS03805 ^@ http://purl.uniprot.org/uniprot/A0A1D7THR2 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATP phosphoribosyltransferase family. Short subfamily.|||Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.|||Cytoplasm|||Heteromultimer composed of HisG and HisZ subunits.|||Lacks the C-terminal regulatory region which is replaced by HisZ. http://togogenome.org/gene/1193502:SHALO_RS04450 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI61 ^@ Similarity ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. http://togogenome.org/gene/1193502:SHALO_RS09540 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKZ2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. http://togogenome.org/gene/1193502:SHALO_RS13920 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNH6 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS13870 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNG7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS07900 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK17 ^@ Similarity ^@ Belongs to the serine/threonine dehydratase family. http://togogenome.org/gene/1193502:SHALO_RS08765 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKJ4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecA family.|||Cell membrane|||Cytoplasm|||Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. http://togogenome.org/gene/1193502:SHALO_RS04750 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIB6 ^@ Similarity ^@ Belongs to the SCO1/2 family. http://togogenome.org/gene/1193502:SHALO_RS08270 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKB0 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the queuine tRNA-ribosyltransferase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).|||Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1. http://togogenome.org/gene/1193502:SHALO_RS05845 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ30 ^@ Similarity ^@ Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. http://togogenome.org/gene/1193502:SHALO_RS10880 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLS4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00650 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC5 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL20 family.|||Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. http://togogenome.org/gene/1193502:SHALO_RS13825 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpA family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the extracellular potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/1193502:SHALO_RS00550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFY1 ^@ Similarity ^@ Belongs to the SIS family. GutQ/KpsF subfamily. http://togogenome.org/gene/1193502:SHALO_RS03765 ^@ http://purl.uniprot.org/uniprot/A0A1D7THQ6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS12565 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMQ1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS12685 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMR6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12120 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMN2 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL36 family. http://togogenome.org/gene/1193502:SHALO_RS10230 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLC7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase group 1 family.|||Cell inner membrane|||Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A. http://togogenome.org/gene/1193502:SHALO_RS14310 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNU8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the PAPS reductase family. CysH subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS) using thioredoxin as an electron donor.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS03890 ^@ http://purl.uniprot.org/uniprot/A0A1D7THV7 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS00310 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFR9 ^@ Similarity ^@ Belongs to the hcp beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS09755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL53 ^@ Similarity ^@ Belongs to the PrpD family. http://togogenome.org/gene/1193502:SHALO_RS04240 ^@ http://purl.uniprot.org/uniprot/A0A1D7TID0 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase RluA family.|||Responsible for synthesis of pseudouridine from uracil. http://togogenome.org/gene/1193502:SHALO_RS00440 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFU6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0056 (MarC) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07260 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJQ4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.|||Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS13545 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN91 ^@ Similarity ^@ Belongs to the pirin family. http://togogenome.org/gene/1193502:SHALO_RS08675 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKH8 ^@ Similarity ^@ Belongs to the TlyA family. http://togogenome.org/gene/1193502:SHALO_RS12825 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMU2 ^@ Similarity ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. SDR39U1 subfamily. http://togogenome.org/gene/1193502:SHALO_RS12995 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMZ9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.|||Cell inner membrane http://togogenome.org/gene/1193502:SHALO_RS02590 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH71 ^@ Similarity ^@ Belongs to the complex I 51 kDa subunit family. http://togogenome.org/gene/1193502:SHALO_RS04645 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI54 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TVP38/TMEM64 family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14865 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP12 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the aconitase/IPM isomerase family. LeuC type 2 subfamily.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/1193502:SHALO_RS05950 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIZ1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07980 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK25 ^@ Similarity ^@ Belongs to the hcp beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS11835 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMA4 ^@ Similarity ^@ Belongs to the PhoU family. http://togogenome.org/gene/1193502:SHALO_RS11785 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM90 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.|||Binds 1 S-adenosyl-L-methionine per subunit.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS06920 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJP0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase A chain family.|||Cell membrane|||Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS02565 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH01 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 4L family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS03185 ^@ http://purl.uniprot.org/uniprot/A0A1D7THD5 ^@ Similarity ^@ Belongs to the YoeB family. http://togogenome.org/gene/1193502:SHALO_RS03475 ^@ http://purl.uniprot.org/uniprot/A0A1D7THF9 ^@ Similarity ^@ Belongs to the hcp beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS09045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKT7 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS03035 ^@ http://purl.uniprot.org/uniprot/A0A1D7THH1 ^@ Similarity ^@ Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily. http://togogenome.org/gene/1193502:SHALO_RS02820 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH96 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.|||Belongs to the EF-Ts family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS02675 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH54 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS03370 ^@ http://purl.uniprot.org/uniprot/A0A1D7THI3 ^@ Similarity ^@ Belongs to the pyruvate kinase family. http://togogenome.org/gene/1193502:SHALO_RS02215 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGV4 ^@ Similarity ^@ Belongs to the XFP family. http://togogenome.org/gene/1193502:SHALO_RS03755 ^@ http://purl.uniprot.org/uniprot/A0A1D7THQ1 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 3 Mg(2+) ions per subunit.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS14525 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNS3 ^@ Activity Regulation|||Cofactor|||Function|||Similarity ^@ Allosterically activated by GTP.|||Belongs to the UPRTase family.|||Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.|||Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate. http://togogenome.org/gene/1193502:SHALO_RS02790 ^@ http://purl.uniprot.org/uniprot/A0A1D7THB3 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanB family.|||Binds 1 Mg(2+) ion per subunit.|||Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.|||Cytoplasm|||Homodecamer; pentamer of dimers. http://togogenome.org/gene/1193502:SHALO_RS05405 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIK8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the thiamine-phosphate synthase family.|||Binds 1 Mg(2+) ion per subunit.|||Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). http://togogenome.org/gene/1193502:SHALO_RS05530 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIR4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the TrpB family.|||Tetramer of two alpha and two beta chains.|||The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine. http://togogenome.org/gene/1193502:SHALO_RS13680 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNI0 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/1193502:SHALO_RS01130 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGF8 ^@ Similarity|||Subcellular Location Annotation ^@ Cytoplasm|||In the C-terminal section; belongs to the PRA-PH family.|||In the N-terminal section; belongs to the PRA-CH family. http://togogenome.org/gene/1193502:SHALO_RS04725 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIB2 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.|||Carbon 2 of the heme B porphyrin ring is defined according to the Fischer nomenclature.|||Cell membrane|||Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14770 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNY0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS11045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLT7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS02880 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH47 ^@ Cofactor|||PTM|||Subcellular Location Annotation ^@ Binds 2 heme groups per subunit.|||Binds 2 heme groups.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS12130 ^@ http://purl.uniprot.org/uniprot/A0A1D7TME7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.|||Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.|||Monomer.|||Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed. http://togogenome.org/gene/1193502:SHALO_RS07945 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK23 ^@ Similarity ^@ Belongs to the desulfoferrodoxin family. http://togogenome.org/gene/1193502:SHALO_RS07920 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK38 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07295 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJZ6 ^@ Similarity ^@ Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/1193502:SHALO_RS10935 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLT8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the hcp beta-lactamase family.|||Hydrolyzes 6-aminopenicillinic acid and 7-aminocephalosporanic acid (ACA) derivatives.|||Secreted http://togogenome.org/gene/1193502:SHALO_RS07110 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJJ2 ^@ Similarity ^@ Belongs to the HypD family. http://togogenome.org/gene/1193502:SHALO_RS08060 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKD6 ^@ Cofactor|||Similarity ^@ Belongs to the TPP enzyme family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit. http://togogenome.org/gene/1193502:SHALO_RS05555 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIN2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase S26 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS08645 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKH1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin. http://togogenome.org/gene/1193502:SHALO_RS05780 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIW1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS10085 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLA5 ^@ Similarity ^@ Belongs to the ClpA/ClpB family. http://togogenome.org/gene/1193502:SHALO_RS14850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNY6 ^@ Similarity ^@ Belongs to the catalase family. http://togogenome.org/gene/1193502:SHALO_RS08860 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKK7 ^@ Similarity ^@ Belongs to the SAICAR synthetase family. http://togogenome.org/gene/1193502:SHALO_RS15435 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIC1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14455 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNT2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS08120 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK81 ^@ Similarity ^@ Belongs to the transferase hexapeptide repeat family. http://togogenome.org/gene/1193502:SHALO_RS14520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNS6 ^@ Function|||Similarity ^@ Belongs to the Glu/Leu/Phe/Val dehydrogenases family.|||Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia. http://togogenome.org/gene/1193502:SHALO_RS00090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFP5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the LeuD family. LeuD type 2 subfamily.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/1193502:SHALO_RS02555 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH36 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 23 kDa subunit family.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS04035 ^@ http://purl.uniprot.org/uniprot/A0A1D7THY4 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspH family.|||Binds 1 [4Fe-4S] cluster per subunit.|||Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. http://togogenome.org/gene/1193502:SHALO_RS03980 ^@ http://purl.uniprot.org/uniprot/A0A1D7THQ9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter large permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/1193502:SHALO_RS04345 ^@ http://purl.uniprot.org/uniprot/A0A1D7THZ9 ^@ Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. http://togogenome.org/gene/1193502:SHALO_RS03285 ^@ http://purl.uniprot.org/uniprot/A0A1D7THW0 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subunit ^@ Belongs to the IMPDH/GMPR family.|||Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH. http://togogenome.org/gene/1193502:SHALO_RS05490 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIN4 ^@ Cofactor|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M48B family.|||Binds 1 zinc ion per subunit.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11430 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM50 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 4 family. MraY subfamily.|||Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03335 ^@ http://purl.uniprot.org/uniprot/A0A1D7THW9 ^@ Similarity ^@ Belongs to the RutC family. http://togogenome.org/gene/1193502:SHALO_RS11730 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM85 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS10570 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLL0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07240 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJP1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDP-alcohol phosphatidyltransferase class-I family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04130 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI02 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the HemJ family.|||Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.|||Catalyzes the oxidation of protoporphyrinogen IX to protoporphyrin IX.|||Cell membrane|||Homodimer.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS05735 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIS2 ^@ Subcellular Location Annotation ^@ Mitochondrion http://togogenome.org/gene/1193502:SHALO_RS02745 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH59 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Lgt family.|||Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS11275 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLY7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the gmhB family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS08315 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKA1 ^@ Similarity ^@ To bacterial alkanal monooxygenase alpha and beta chains. http://togogenome.org/gene/1193502:SHALO_RS07510 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJV8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the GTP cyclohydrolase II family.|||Binds 1 zinc ion per subunit.|||Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate. http://togogenome.org/gene/1193502:SHALO_RS02560 ^@ http://purl.uniprot.org/uniprot/A0A1D7THH4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 6 family.|||Cell membrane|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS07100 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJM4 ^@ Similarity ^@ Belongs to the SIMIBI class G3E GTPase family. HypB/HupM subfamily. http://togogenome.org/gene/1193502:SHALO_RS13145 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN29 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NrfD family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS05650 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIT4 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS6 family.|||Binds together with S18 to 16S ribosomal RNA. http://togogenome.org/gene/1193502:SHALO_RS11565 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM42 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS08670 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKI2 ^@ Function|||Similarity ^@ Belongs to the ribF family.|||Catalyzes the phosphorylation of riboflavin to FMN followed by the adenylation of FMN to FAD. http://togogenome.org/gene/1193502:SHALO_RS06630 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJD3 ^@ Similarity ^@ Belongs to the desulfoferrodoxin family. http://togogenome.org/gene/1193502:SHALO_RS12070 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMM8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the YbaB/EbfC family.|||Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.|||Homodimer.|||nucleoid http://togogenome.org/gene/1193502:SHALO_RS00640 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFX7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-3 family.|||Cytoplasm|||IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS14475 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNR1 ^@ Similarity ^@ Belongs to the phosphate/phosphite/phosphonate binding protein family. http://togogenome.org/gene/1193502:SHALO_RS12100 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMG4 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase alpha chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.|||The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements. http://togogenome.org/gene/1193502:SHALO_RS08135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK60 ^@ Function|||Similarity ^@ Belongs to the thymidylate kinase family.|||Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis. http://togogenome.org/gene/1193502:SHALO_RS01285 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGI8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.|||This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. http://togogenome.org/gene/1193502:SHALO_RS10380 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLG3 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each. http://togogenome.org/gene/1193502:SHALO_RS11420 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM16 ^@ Function|||Similarity|||Subunit ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family.|||Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.|||Homotetramer. http://togogenome.org/gene/1193502:SHALO_RS09570 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKZ9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the LeuD family. LeuD type 2 subfamily.|||Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.|||Heterodimer of LeuC and LeuD. http://togogenome.org/gene/1193502:SHALO_RS10490 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLK2 ^@ Similarity ^@ Belongs to the CitG/MdcB family. http://togogenome.org/gene/1193502:SHALO_RS05585 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIP2 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the radical SAM superfamily. MqnC family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). http://togogenome.org/gene/1193502:SHALO_RS13015 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN57 ^@ Similarity ^@ Belongs to the hcp beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS04260 ^@ http://purl.uniprot.org/uniprot/A0A1D7THW6 ^@ Subcellular Location Annotation|||Subunit ^@ Forms a membrane-associated complex with FtsE.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS06965 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJH3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase A24 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13885 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF0 ^@ Similarity ^@ Belongs to the YkuD family. http://togogenome.org/gene/1193502:SHALO_RS02670 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH63 ^@ Similarity|||Subunit ^@ Belongs to the ALAD family.|||Homooctamer. http://togogenome.org/gene/1193502:SHALO_RS11030 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLW3 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.|||Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).|||Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.|||Cytoplasm|||Homodimer. The tRNA molecule binds across the dimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS09625 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL30 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS01380 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGE9 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL32 family. http://togogenome.org/gene/1193502:SHALO_RS13340 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN41 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane http://togogenome.org/gene/1193502:SHALO_RS08585 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKF3 ^@ Similarity ^@ Belongs to the threonine synthase family. http://togogenome.org/gene/1193502:SHALO_RS03385 ^@ http://purl.uniprot.org/uniprot/A0A1D7THX5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS03990 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI84 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the OadG family.|||Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS03525 ^@ http://purl.uniprot.org/uniprot/A0A1D7THG8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).|||Belongs to the AccD/PCCB family.|||Binds 1 zinc ion per subunit.|||Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS14745 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNW1 ^@ Caution|||Function|||Similarity ^@ Belongs to the MqnA/MqnD family. MqnD subfamily.|||Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00975 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG69 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 4L family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS08030 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK43 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PNP synthase family.|||Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.|||Cytoplasm|||Homooctamer; tetramer of dimers. http://togogenome.org/gene/1193502:SHALO_RS05400 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIP0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03290 ^@ http://purl.uniprot.org/uniprot/A0A1D7THC7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the AB hydrolase superfamily. MetX family.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. http://togogenome.org/gene/1193502:SHALO_RS06780 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJC1 ^@ Similarity ^@ Belongs to the nitroreductase family. http://togogenome.org/gene/1193502:SHALO_RS10950 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM08 ^@ Similarity ^@ Belongs to the hemerythrin family. http://togogenome.org/gene/1193502:SHALO_RS08430 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKC6 ^@ Cofactor|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the HMBS family.|||Binds 1 dipyrromethane group covalently.|||Monomer.|||Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.|||The porphobilinogen subunits are added to the dipyrromethane group. http://togogenome.org/gene/1193502:SHALO_RS11665 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF3 ^@ Cofactor|||Similarity ^@ Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.|||Binds 3 [4Fe-4S] clusters per subunit. http://togogenome.org/gene/1193502:SHALO_RS14255 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNU1 ^@ Similarity ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. http://togogenome.org/gene/1193502:SHALO_RS07395 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK14 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL9 family.|||Binds to the 23S rRNA. http://togogenome.org/gene/1193502:SHALO_RS09860 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLE0 ^@ Similarity ^@ Belongs to the FeoA family. http://togogenome.org/gene/1193502:SHALO_RS06935 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJJ0 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatB/GatE family. GatB subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/1193502:SHALO_RS10875 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLT5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the pyrroline-5-carboxylate reductase family.|||Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS07605 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJU6 ^@ Function|||Similarity ^@ Belongs to the CobB/CobQ family. CobQ subfamily.|||Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. http://togogenome.org/gene/1193502:SHALO_RS02905 ^@ http://purl.uniprot.org/uniprot/A0A1D7THA7 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily. http://togogenome.org/gene/1193502:SHALO_RS11260 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLY6 ^@ Similarity ^@ Belongs to the glycosyltransferase 10 family. http://togogenome.org/gene/1193502:SHALO_RS09965 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL76 ^@ Function|||PTM|||Similarity ^@ An intermediate of this reaction is the autophosphorylated ppk in which a phosphate is covalently linked to a histidine residue through a N-P bond.|||Belongs to the polyphosphate kinase 1 (PPK1) family.|||Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). http://togogenome.org/gene/1193502:SHALO_RS06855 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJG4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum|||Belongs to the FliD family.|||Homopentamer.|||Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.|||Secreted http://togogenome.org/gene/1193502:SHALO_RS15130 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP62 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the LemA family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04475 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI56 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. DIT1 subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00525 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG41 ^@ Caution|||Cofactor|||Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the radical SAM superfamily. RlmN family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.|||Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity. http://togogenome.org/gene/1193502:SHALO_RS10305 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLF7 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.|||Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS11600 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM51 ^@ Function|||Similarity|||Subunit ^@ Belongs to the PurK/PurT family.|||Homodimer.|||Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate. http://togogenome.org/gene/1193502:SHALO_RS09925 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL75 ^@ Function|||Similarity ^@ Belongs to the helicase family. DnaB subfamily.|||Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. http://togogenome.org/gene/1193502:SHALO_RS01970 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGQ4 ^@ Similarity ^@ Belongs to the DegT/DnrJ/EryC1 family. http://togogenome.org/gene/1193502:SHALO_RS04360 ^@ http://purl.uniprot.org/uniprot/A0A1D7THZ2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the imidazoleglycerol-phosphate dehydratase family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS00700 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC9 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the malate synthase family. GlcB subfamily.|||Cytoplasm|||Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS07955 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK27 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the gamma-glutamyl phosphate reductase family.|||Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS02890 ^@ http://purl.uniprot.org/uniprot/A0A1D7THD6 ^@ Similarity ^@ Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS11485 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM19 ^@ Function|||Similarity ^@ Belongs to the glucose-1-phosphate thymidylyltransferase family.|||Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. http://togogenome.org/gene/1193502:SHALO_RS02130 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGS6 ^@ Similarity ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. http://togogenome.org/gene/1193502:SHALO_RS05155 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIJ5 ^@ Similarity ^@ Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/1193502:SHALO_RS10740 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLM8 ^@ Similarity ^@ Belongs to the peptidase A31 family. http://togogenome.org/gene/1193502:SHALO_RS13925 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNN0 ^@ Similarity|||Subunit ^@ Belongs to the GTP cyclohydrolase I family.|||Homopolymer. http://togogenome.org/gene/1193502:SHALO_RS10715 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLM2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS04810 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI83 ^@ Function|||Similarity ^@ ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.|||Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily. http://togogenome.org/gene/1193502:SHALO_RS00480 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFW8 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the ribonucleoside diphosphate reductase small chain family.|||Binds 2 iron ions per subunit.|||Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. http://togogenome.org/gene/1193502:SHALO_RS13810 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNG6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS10275 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLF5 ^@ Similarity ^@ Belongs to the glutamine synthetase family. http://togogenome.org/gene/1193502:SHALO_RS10465 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLJ7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS00855 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG42 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein 3 family. http://togogenome.org/gene/1193502:SHALO_RS08870 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKL3 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.|||Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL. http://togogenome.org/gene/1193502:SHALO_RS06665 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJB3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS04550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI81 ^@ Cofactor|||PTM|||Similarity ^@ Belongs to the NapC/NirT/NrfH family.|||Binds 4 heme groups per subunit. http://togogenome.org/gene/1193502:SHALO_RS09210 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKT1 ^@ Similarity ^@ Belongs to the flagella basal body rod proteins family. http://togogenome.org/gene/1193502:SHALO_RS01895 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGV7 ^@ Similarity ^@ Belongs to the peptidase S49 family. http://togogenome.org/gene/1193502:SHALO_RS10100 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLC0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SmpB family.|||Cytoplasm|||Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation. http://togogenome.org/gene/1193502:SHALO_RS10270 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLD5 ^@ Similarity ^@ Belongs to the PHP hydrolase family. HisK subfamily. http://togogenome.org/gene/1193502:SHALO_RS11410 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM18 ^@ Function|||Similarity ^@ Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.|||Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition. http://togogenome.org/gene/1193502:SHALO_RS08105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK58 ^@ Similarity ^@ Belongs to the NifD/NifK/NifE/NifN family. http://togogenome.org/gene/1193502:SHALO_RS13055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN02 ^@ Similarity ^@ Belongs to the class-II fumarase/aspartase family. Aspartase subfamily. http://togogenome.org/gene/1193502:SHALO_RS11085 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLW5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the STT3 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS10865 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLQ2 ^@ Similarity ^@ Belongs to the ModE family. http://togogenome.org/gene/1193502:SHALO_RS02990 ^@ http://purl.uniprot.org/uniprot/A0A1D7THA6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DnaX/STICHEL family.|||DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.|||DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. http://togogenome.org/gene/1193502:SHALO_RS11855 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM95 ^@ Similarity ^@ Belongs to the DODA-type extradiol aromatic ring-opening dioxygenase family. http://togogenome.org/gene/1193502:SHALO_RS04030 ^@ http://purl.uniprot.org/uniprot/A0A1D7THS0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the EPSP synthase family.|||Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS11245 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLX8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS01040 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG55 ^@ Function|||Similarity ^@ Belongs to the MoeA family.|||Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. http://togogenome.org/gene/1193502:SHALO_RS01300 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.|||Homodimer.|||Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine. http://togogenome.org/gene/1193502:SHALO_RS13900 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF2 ^@ Similarity|||Subunit ^@ Belongs to the MoaE family.|||Heterotetramer of 2 MoaD subunits and 2 MoaE subunits. Also stable as homodimer. The enzyme changes between these two forms during catalysis. http://togogenome.org/gene/1193502:SHALO_RS00070 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFP9 ^@ Similarity ^@ Belongs to the class-I fumarase family. http://togogenome.org/gene/1193502:SHALO_RS01680 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGL2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0324 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07600 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK45 ^@ Function|||Similarity ^@ Belongs to the CobU/CobP family.|||Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. http://togogenome.org/gene/1193502:SHALO_RS10890 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLQ6 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/1193502:SHALO_RS10815 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLP0 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). http://togogenome.org/gene/1193502:SHALO_RS11205 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLX6 ^@ Similarity ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. http://togogenome.org/gene/1193502:SHALO_RS10080 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLA2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the L/F-transferase family.|||Cytoplasm|||Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. http://togogenome.org/gene/1193502:SHALO_RS04365 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI15 ^@ Similarity|||Subunit ^@ Belongs to the KdsC family.|||Homotetramer. http://togogenome.org/gene/1193502:SHALO_RS12870 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMW8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the EamA transporter family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14530 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNT5 ^@ Cofactor|||Similarity ^@ Belongs to the malic enzymes family.|||Divalent metal cations. Prefers magnesium or manganese. http://togogenome.org/gene/1193502:SHALO_RS01625 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGH4 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07290 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJP9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the D-alanine--D-alanine ligase family.|||Cell wall formation.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS14740 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNX5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RecA family.|||Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS12230 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL3 family.|||One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19. http://togogenome.org/gene/1193502:SHALO_RS02445 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGX8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS12 family.|||Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.|||With S4 and S5 plays an important role in translational accuracy. http://togogenome.org/gene/1193502:SHALO_RS08760 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKR7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS03910 ^@ http://purl.uniprot.org/uniprot/A0A1D7THT3 ^@ Function|||Similarity ^@ Belongs to the phage GPA family.|||Possible endonuclease which induces a single-strand cut and initiates DNA replication. http://togogenome.org/gene/1193502:SHALO_RS04615 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI65 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS09600 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL20 ^@ Similarity ^@ Belongs to the DNA repair enzymes AP/ExoA family. http://togogenome.org/gene/1193502:SHALO_RS01490 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGG6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RbfA family.|||Cytoplasm|||Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.|||One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. http://togogenome.org/gene/1193502:SHALO_RS12520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMP3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the YejK family.|||nucleoid http://togogenome.org/gene/1193502:SHALO_RS11695 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM82 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the LuxS family.|||Binds 1 Fe cation per subunit.|||Homodimer.|||Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). http://togogenome.org/gene/1193502:SHALO_RS01995 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGX7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.|||Cell membrane|||Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner. http://togogenome.org/gene/1193502:SHALO_RS00225 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFT0 ^@ Cofactor ^@ Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. http://togogenome.org/gene/1193502:SHALO_RS11645 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM79 ^@ Subcellular Location Annotation ^@ Cell outer membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00980 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGD0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS08740 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKN5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase S1C family.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS00050 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFM5 ^@ Similarity ^@ Belongs to the ABC transporter superfamily. http://togogenome.org/gene/1193502:SHALO_RS01190 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG88 ^@ Caution|||Cofactor|||Similarity|||Subunit ^@ Belongs to the CarB family.|||Binds 4 Mg(2+) or Mn(2+) ions per subunit.|||Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS14505 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNU2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cytoplasm|||Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.|||Forms polymers.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS10980 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLV4 ^@ Function|||Similarity ^@ Belongs to the NusB family.|||Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. http://togogenome.org/gene/1193502:SHALO_RS03850 ^@ http://purl.uniprot.org/uniprot/A0A1D7THS4 ^@ Function|||Subunit ^@ Catalyzes the synthesis of GMP from XMP.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS02340 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH14 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS03780 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI46 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).|||Belongs to the GatC family.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/1193502:SHALO_RS07915 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK19 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11150 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM57 ^@ Caution|||Similarity ^@ Belongs to the 4-hydroxy-2-oxovalerate aldolase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS03565 ^@ http://purl.uniprot.org/uniprot/A0A1D7THR5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliN/MopA/SpaO family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13995 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNI6 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS09275 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKV2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS10280 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLD7 ^@ Similarity ^@ In the C-terminal section; belongs to the transpeptidase family.|||In the N-terminal section; belongs to the glycosyltransferase 51 family. http://togogenome.org/gene/1193502:SHALO_RS08510 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKD9 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Belongs to the histidinol dehydrogenase family.|||Binds 1 zinc ion per subunit.|||Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS08350 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKA8 ^@ Activity Regulation|||Caution|||Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A peripheral cell membrane enzyme that catalyzes the oxidative decarboxylation of pyruvate to form acetate and CO(2). It channels electrons from the cytoplasm to the respiratory chain at the cell membrane via ubiquinone.|||Belongs to the TPP enzyme family.|||Binds 1 FAD per subunit.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit.|||Cell membrane|||Has 4 domains; the Pyr domain which binds the pyrimidine moiety of the thiamine pyrophosphate cofactor, the FAD-binding domain, the PP-binding domain which binds the pyrophosphate portion of thiamine pyrophosphate and the C-terminal membrane binding region. The C-terminus is held closely against the rest of the protein and covers the active site; during activation it unfolds from the rest of the protein and forms an amphipathic helix upon membrane binding, exposing the active site.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||The C-terminus inhibits activity; it has to move for the enzyme to be active. Activated by lipid-binding, which occurs via the C-terminus. http://togogenome.org/gene/1193502:SHALO_RS12095 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMD9 ^@ Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL17 family.|||Part of the 50S ribosomal subunit. Contacts protein L32. http://togogenome.org/gene/1193502:SHALO_RS01105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG91 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the DapB family.|||Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.|||Cytoplasm|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction. http://togogenome.org/gene/1193502:SHALO_RS00755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG19 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MlaE permease family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04280 ^@ http://purl.uniprot.org/uniprot/A0A1D7THW4 ^@ Function|||Similarity ^@ Belongs to the relA/spoT family.|||In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. http://togogenome.org/gene/1193502:SHALO_RS12360 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMK4 ^@ Domain|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CheB family.|||Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.|||Cytoplasm|||Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.|||Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity. http://togogenome.org/gene/1193502:SHALO_RS04845 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIA2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ferredoxin thioredoxin reductase beta subunit family.|||Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.|||Heterodimer of subunit A (variable subunit) and subunit B (catalytic subunit). Heterodimeric FTR forms a complex with ferredoxin and thioredoxin. http://togogenome.org/gene/1193502:SHALO_RS10575 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLK1 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the radical SAM superfamily. MqnE family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. http://togogenome.org/gene/1193502:SHALO_RS14315 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNN7 ^@ Similarity ^@ Belongs to the PAPS reductase family. CysD subfamily. http://togogenome.org/gene/1193502:SHALO_RS03275 ^@ http://purl.uniprot.org/uniprot/A0A1D7THG3 ^@ Cofactor|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).|||Cytoplasm|||IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS02430 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGZ2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL12 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.|||Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors. http://togogenome.org/gene/1193502:SHALO_RS08550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKE7 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoB family.|||Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS08515 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKL7 ^@ Similarity ^@ Belongs to the ACC deaminase/D-cysteine desulfhydrase family. http://togogenome.org/gene/1193502:SHALO_RS09075 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKR1 ^@ Domain|||Similarity ^@ Belongs to the PurH family.|||The IMP cyclohydrolase activity resides in the N-terminal region. http://togogenome.org/gene/1193502:SHALO_RS10665 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLQ1 ^@ Similarity ^@ Belongs to the SUI1 family. http://togogenome.org/gene/1193502:SHALO_RS05675 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIV5 ^@ Function|||Similarity|||Subunit ^@ ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.|||Belongs to the ParA family. MinD subfamily.|||Interacts with MinC and FtsZ. http://togogenome.org/gene/1193502:SHALO_RS05990 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIW6 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the polypeptide deformylase family.|||Binds 1 Fe(2+) ion.|||Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. http://togogenome.org/gene/1193502:SHALO_RS04520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIA6 ^@ Similarity ^@ Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. http://togogenome.org/gene/1193502:SHALO_RS04425 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI44 ^@ Caution|||Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FBPase class 1 family.|||Binds 2 magnesium ions per subunit.|||Cytoplasm|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS01235 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGH8 ^@ Function|||Similarity ^@ Belongs to the GreA/GreB family.|||Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. http://togogenome.org/gene/1193502:SHALO_RS04735 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIC0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS03130 ^@ http://purl.uniprot.org/uniprot/A0A1D7THA0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter small permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/1193502:SHALO_RS04980 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIC2 ^@ Similarity ^@ Belongs to the MipA/OmpV family. http://togogenome.org/gene/1193502:SHALO_RS03230 ^@ http://purl.uniprot.org/uniprot/A0A1D7THC2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS11935 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMC7 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS9 family. http://togogenome.org/gene/1193502:SHALO_RS11385 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM23 ^@ Cofactor|||Miscellaneous|||Subcellular Location Annotation|||Subunit ^@ Binds 1 [2Fe-2S] cluster per subunit.|||Membrane|||The Rieske protein is a high potential 2Fe-2S protein.|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/1193502:SHALO_RS12170 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMP1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL5 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.|||This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. http://togogenome.org/gene/1193502:SHALO_RS13520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN92 ^@ Similarity ^@ Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. http://togogenome.org/gene/1193502:SHALO_RS15025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP21 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NrfD family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07200 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJL1 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.|||Cytoplasm|||Homotetramer.|||Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate.|||There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors. http://togogenome.org/gene/1193502:SHALO_RS00460 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFX4 ^@ Activity Regulation|||Caution|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.|||Belongs to the CTP synthase family.|||CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.|||Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00905 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG51 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the AP endonuclease 2 family.|||Binds 3 Zn(2+) ions.|||Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. http://togogenome.org/gene/1193502:SHALO_RS12755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMT8 ^@ Similarity ^@ Belongs to the UPF0751 family. http://togogenome.org/gene/1193502:SHALO_RS01345 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC3 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the transketolase family. DXPS subfamily.|||Binds 1 Mg(2+) ion per subunit.|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS03340 ^@ http://purl.uniprot.org/uniprot/A0A1D7THD9 ^@ Similarity ^@ Belongs to the MQO family. http://togogenome.org/gene/1193502:SHALO_RS11875 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMC2 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03325 ^@ http://purl.uniprot.org/uniprot/A0A1D7THC9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.|||Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS06745 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJB8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01835 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGP0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b family.|||Binds 2 heme groups non-covalently.|||Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.|||Membrane|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/1193502:SHALO_RS10050 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLB1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecD/SecF family. SecF subfamily.|||Cell membrane|||Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Membrane|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. http://togogenome.org/gene/1193502:SHALO_RS03450 ^@ http://purl.uniprot.org/uniprot/A0A1D7THK3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13310 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN59 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the formate dehydrogenase gamma subunit family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS06190 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ10 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS11000 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM25 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the KdsA family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS08115 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK62 ^@ Similarity|||Subunit ^@ Belongs to the NifD/NifK/NifE/NifN family.|||Hexamer of two alpha, two beta, and two delta chains. http://togogenome.org/gene/1193502:SHALO_RS08295 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK93 ^@ Similarity ^@ Belongs to the AAA ATPase family.|||In the C-terminal section; belongs to the peptidase M41 family. http://togogenome.org/gene/1193502:SHALO_RS00145 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFX1 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS04135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIB3 ^@ Function|||Similarity ^@ Belongs to the CowN family.|||Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO. http://togogenome.org/gene/1193502:SHALO_RS13385 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN62 ^@ Similarity ^@ Belongs to the ModE family. http://togogenome.org/gene/1193502:SHALO_RS10245 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLG9 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/1193502:SHALO_RS08445 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKH6 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.|||Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys-tRNA(Pro) is not edited by ProRS.|||Consists of three domains: the N-terminal catalytic domain, the editing domain and the C-terminal anticodon-binding domain.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS10580 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLT3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0719 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12760 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMU6 ^@ Similarity ^@ Belongs to the phosphate/phosphite/phosphonate binding protein family. http://togogenome.org/gene/1193502:SHALO_RS14760 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNW7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the KAE1 / TsaD family.|||Binds 1 Fe(2+) ion per subunit.|||Cytoplasm|||Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction. http://togogenome.org/gene/1193502:SHALO_RS08005 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK40 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS00820 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG09 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS04895 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIA7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b family.|||Binds 2 heme groups non-covalently.|||Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.|||Membrane|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/1193502:SHALO_RS03775 ^@ http://purl.uniprot.org/uniprot/A0A1D7THS8 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/1193502:SHALO_RS09325 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKW1 ^@ Similarity ^@ Belongs to the xanthine dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS03010 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH84 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the HCP family.|||Binds 1 [4Fe-4S] cluster.|||Binds 1 hybrid [4Fe-2O-2S] cluster.|||Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS02225 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGW4 ^@ Similarity ^@ Belongs to the DDAH family. http://togogenome.org/gene/1193502:SHALO_RS02850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH50 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS10495 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLH7 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS12155 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMG0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL6 family.|||Part of the 50S ribosomal subunit.|||This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. http://togogenome.org/gene/1193502:SHALO_RS00025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFQ0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.|||Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS08425 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKD4 ^@ Similarity ^@ Belongs to the UbiD family. http://togogenome.org/gene/1193502:SHALO_RS09090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKQ4 ^@ Similarity ^@ Belongs to the acyl coenzyme A hydrolase family. http://togogenome.org/gene/1193502:SHALO_RS09475 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKZ6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ammonia transporter channel (TC 1.A.11.2) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMN1 ^@ Similarity ^@ Belongs to the band 7/mec-2 family. Flotillin subfamily. http://togogenome.org/gene/1193502:SHALO_RS00685 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG13 ^@ Similarity ^@ Belongs to the UPF0234 family. http://togogenome.org/gene/1193502:SHALO_RS12985 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMX1 ^@ Similarity ^@ Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/1193502:SHALO_RS02780 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH25 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS08850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKK8 ^@ Similarity ^@ Belongs to the ClpA/ClpB family. http://togogenome.org/gene/1193502:SHALO_RS02685 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH31 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the anaerobic coproporphyrinogen-III oxidase family.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Cytoplasm|||Involved in the heme biosynthesis. Catalyzes the anaerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen III to yield the vinyl groups in protoporphyrinogen IX.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS08855 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKK9 ^@ Similarity ^@ Belongs to the peptidase S41A family. http://togogenome.org/gene/1193502:SHALO_RS08210 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKG5 ^@ Similarity ^@ Belongs to the LarC family. http://togogenome.org/gene/1193502:SHALO_RS08140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKC1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the bacterial CoaD family.|||Cytoplasm|||Homohexamer.|||Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. http://togogenome.org/gene/1193502:SHALO_RS02665 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH20 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the GTP cyclohydrolase II family.|||Binds 1 zinc ion per subunit.|||Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate. http://togogenome.org/gene/1193502:SHALO_RS05025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIG7 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system. http://togogenome.org/gene/1193502:SHALO_RS05560 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIT2 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.|||Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS12305 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMI6 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the chorismate synthase family.|||Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.|||Homotetramer.|||Reduced FMN (FMNH(2)). http://togogenome.org/gene/1193502:SHALO_RS01000 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGJ8 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS07330 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJP8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.|||Bacterial flagellum basal body|||Belongs to the FlgH family.|||Cell outer membrane|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. http://togogenome.org/gene/1193502:SHALO_RS02845 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH79 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatA/E family.|||Cell membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/1193502:SHALO_RS14755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNZ9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurB family.|||Cell wall formation.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS13005 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMY8 ^@ Subcellular Location Annotation ^@ Secreted http://togogenome.org/gene/1193502:SHALO_RS05010 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIC5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TACO1 family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS12110 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS11 family.|||Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.|||Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3. http://togogenome.org/gene/1193502:SHALO_RS14555 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNV4 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the dCTP deaminase family.|||Catalyzes the deamination of dCTP to dUTP.|||Homotrimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS06115 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ89 ^@ Function|||Similarity ^@ Belongs to the flavodoxin family.|||Low-potential electron donor to a number of redox enzymes. http://togogenome.org/gene/1193502:SHALO_RS04655 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI88 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TVP38/TMEM64 family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGG0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS10385 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLG5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.|||The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod. http://togogenome.org/gene/1193502:SHALO_RS13375 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN63 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell inner membrane|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04055 ^@ http://purl.uniprot.org/uniprot/A0A1D7THW5 ^@ Similarity ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. http://togogenome.org/gene/1193502:SHALO_RS08835 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKK6 ^@ Function|||Similarity|||Subunit ^@ Belongs to the class II aldolase/RraA-like family.|||Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.|||Homotrimer. http://togogenome.org/gene/1193502:SHALO_RS05995 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ15 ^@ Similarity ^@ Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. http://togogenome.org/gene/1193502:SHALO_RS01095 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG77 ^@ Similarity ^@ Belongs to the thioredoxin family. http://togogenome.org/gene/1193502:SHALO_RS10910 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLQ7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MscS (TC 1.A.23) family.|||Cell inner membrane|||Homoheptamer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12640 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMQ0 ^@ Similarity ^@ Belongs to the FeoA family. http://togogenome.org/gene/1193502:SHALO_RS07700 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK72 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS12260 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMI2 ^@ Similarity ^@ Belongs to the UPF0423 family. http://togogenome.org/gene/1193502:SHALO_RS10790 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLN8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Mrp/NBP35 ATP-binding proteins family.|||Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS14535 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNR9 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.|||Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS03135 ^@ http://purl.uniprot.org/uniprot/A0A1D7THC5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter large permease family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/1193502:SHALO_RS12250 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMJ9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the RNase HII family.|||Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.|||Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding. http://togogenome.org/gene/1193502:SHALO_RS13945 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF9 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the polypeptide deformylase family.|||Binds 1 Fe(2+) ion.|||Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. http://togogenome.org/gene/1193502:SHALO_RS11010 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLU4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MscS (TC 1.A.23) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIB0 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS12140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL15 family.|||Binds to the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1193502:SHALO_RS09765 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLC3 ^@ Similarity ^@ Belongs to the YjdM family. http://togogenome.org/gene/1193502:SHALO_RS07520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJS2 ^@ Function|||Similarity ^@ Belongs to the DMRL synthase family.|||Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. http://togogenome.org/gene/1193502:SHALO_RS08995 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKS9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RsmH family.|||Cytoplasm|||Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. http://togogenome.org/gene/1193502:SHALO_RS08480 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKD7 ^@ Similarity ^@ Belongs to the cysteine synthase/cystathionine beta-synthase family. http://togogenome.org/gene/1193502:SHALO_RS08685 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKG8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11195 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLW6 ^@ Similarity ^@ Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS06095 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ32 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterioferritin family.|||Cytoplasm|||Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex. http://togogenome.org/gene/1193502:SHALO_RS07025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJJ8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GPI family.|||Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS11915 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMB1 ^@ Similarity ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. http://togogenome.org/gene/1193502:SHALO_RS07705 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJX9 ^@ Similarity ^@ Belongs to the CobB/CobQ family. CobQ subfamily. http://togogenome.org/gene/1193502:SHALO_RS11415 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM14 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.|||4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.|||Belongs to the acyl carrier protein (ACP) family.|||Carrier of the growing fatty acid chain in fatty acid biosynthesis.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS11605 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM49 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS04025 ^@ http://purl.uniprot.org/uniprot/A0A1D7THW1 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.|||Binds 2 magnesium ions per tetramer.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/1193502:SHALO_RS10220 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLC5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GTP-binding SRP family. SRP54 subfamily.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS08800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKJ8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0161 family.|||Cell membrane|||Could be involved in insertion of integral membrane proteins into the membrane. http://togogenome.org/gene/1193502:SHALO_RS01005 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG73 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the IPP transferase family.|||Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS15100 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP83 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RRF family.|||Cytoplasm|||Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another. http://togogenome.org/gene/1193502:SHALO_RS14705 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNY8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum|||Belongs to the bacterial flagellin family.|||Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.|||Secreted http://togogenome.org/gene/1193502:SHALO_RS14225 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNK8 ^@ Subcellular Location Annotation ^@ Cell inner membrane http://togogenome.org/gene/1193502:SHALO_RS03695 ^@ http://purl.uniprot.org/uniprot/A0A1D7THQ4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 2 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09545 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL32 ^@ Function|||Similarity ^@ Belongs to the PurU family.|||Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). http://togogenome.org/gene/1193502:SHALO_RS03395 ^@ http://purl.uniprot.org/uniprot/A0A1D7THK8 ^@ Function|||Similarity ^@ Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.|||Belongs to the Fmt family. http://togogenome.org/gene/1193502:SHALO_RS06755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJE7 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/1193502:SHALO_RS03050 ^@ http://purl.uniprot.org/uniprot/A0A1D7THE0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cytochrome b family.|||Binds 2 heme groups non-covalently.|||Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.|||Membrane|||The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein. http://togogenome.org/gene/1193502:SHALO_RS10375 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLG4 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliE family. http://togogenome.org/gene/1193502:SHALO_RS09400 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKX9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MscS (TC 1.A.23) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13910 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF3 ^@ Function|||Similarity ^@ Belongs to the NifU family.|||May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. http://togogenome.org/gene/1193502:SHALO_RS04415 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI26 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Homodimer.|||Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS14205 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNT0 ^@ Similarity ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. http://togogenome.org/gene/1193502:SHALO_RS09650 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL29 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0316 family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS10930 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLU7 ^@ Similarity ^@ Belongs to the ribosome association toxin RatA family. http://togogenome.org/gene/1193502:SHALO_RS01705 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGL1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane http://togogenome.org/gene/1193502:SHALO_RS11900 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMC3 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS14345 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNN6 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS12965 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN47 ^@ Similarity ^@ Belongs to the FldB/FldC dehydratase alpha/beta subunit family. http://togogenome.org/gene/1193502:SHALO_RS14805 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP08 ^@ Function|||Similarity ^@ Belongs to the DXR family.|||Catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP). http://togogenome.org/gene/1193502:SHALO_RS13060 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN08 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.|||Cell inner membrane|||Membrane|||Responsible for the transport of C4-dicarboxylates. http://togogenome.org/gene/1193502:SHALO_RS01290 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PTH family.|||Cytoplasm|||Monomer.|||The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. http://togogenome.org/gene/1193502:SHALO_RS09825 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL56 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS02575 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH32 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 4 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS08565 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKM8 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the NAD synthetase family.|||Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS06740 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJP7 ^@ Similarity ^@ Belongs to the MotB family. http://togogenome.org/gene/1193502:SHALO_RS05690 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIR7 ^@ Similarity ^@ Belongs to the DprA/Smf family. http://togogenome.org/gene/1193502:SHALO_RS01475 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGE4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the GHMP kinase family. Homoserine kinase subfamily.|||Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS06005 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIW7 ^@ Similarity ^@ Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family. http://togogenome.org/gene/1193502:SHALO_RS13160 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN24 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the multiheme cytochrome c family.|||Binds 8 heme c groups covalently per monomer.|||Exposure to oxygen reduces copper binding and leads to the formation of a disulfide bond between the two Cys residues that bind the copper ion.|||Periplasm|||Respiratory sulfite reductase that catalyzes the reduction of sulfite to sulfide in a single step, consuming six electrons in the process. http://togogenome.org/gene/1193502:SHALO_RS07285 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJP2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RuvA family.|||Forms a complex with RuvB.|||The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. http://togogenome.org/gene/1193502:SHALO_RS13935 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNG3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the peptidase S14 family.|||Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.|||Cytoplasm|||Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/1193502:SHALO_RS12060 ^@ http://purl.uniprot.org/uniprot/A0A1D7TME5 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/1193502:SHALO_RS10065 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLH2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CN hydrolase family. Apolipoprotein N-acyltransferase subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13305 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN51 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FdhD family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. http://togogenome.org/gene/1193502:SHALO_RS06395 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ51 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NifD/NifK/NifE/NifN family.|||Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2).|||This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation. http://togogenome.org/gene/1193502:SHALO_RS02550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGZ6 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 1 family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. http://togogenome.org/gene/1193502:SHALO_RS13380 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN48 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the exbB/tolQ family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS15150 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP93 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family. http://togogenome.org/gene/1193502:SHALO_RS13280 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN43 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14595 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNX1 ^@ Similarity ^@ Belongs to the DegT/DnrJ/EryC1 family. http://togogenome.org/gene/1193502:SHALO_RS07930 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK16 ^@ Similarity ^@ Belongs to the class-II DAHP synthase family. http://togogenome.org/gene/1193502:SHALO_RS13930 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNH5 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FKBP-type PPIase family. Tig subfamily.|||Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.|||Cytoplasm|||Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase. http://togogenome.org/gene/1193502:SHALO_RS08070 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK65 ^@ Function|||Similarity|||Subunit ^@ Belongs to the transferase hexapeptide repeat family. LpxD subfamily.|||Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.|||Homotrimer. http://togogenome.org/gene/1193502:SHALO_RS01355 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGS3 ^@ Similarity ^@ Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. http://togogenome.org/gene/1193502:SHALO_RS12045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMD0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01275 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGA2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the transaldolase family. Type 2 subfamily.|||Cytoplasm|||Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. http://togogenome.org/gene/1193502:SHALO_RS13120 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN19 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS05965 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ54 ^@ Function|||Similarity ^@ Belongs to the transposase mutator family.|||Required for the transposition of the insertion element. http://togogenome.org/gene/1193502:SHALO_RS08975 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKP0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS01160 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG97 ^@ Function|||Similarity ^@ Belongs to the QueH family.|||Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr). http://togogenome.org/gene/1193502:SHALO_RS03190 ^@ http://purl.uniprot.org/uniprot/A0A1D7THJ5 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS11135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLX7 ^@ Similarity ^@ Belongs to the DegT/DnrJ/EryC1 family. http://togogenome.org/gene/1193502:SHALO_RS09405 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKX8 ^@ Similarity ^@ Belongs to the glycosyltransferase 20 family. http://togogenome.org/gene/1193502:SHALO_RS13290 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN38 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS14825 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP47 ^@ Similarity ^@ Belongs to the glycerate kinase type-1 family. http://togogenome.org/gene/1193502:SHALO_RS02960 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH74 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the pantothenate synthetase family.|||Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.|||Cytoplasm|||Homodimer.|||The reaction proceeds by a bi uni uni bi ping pong mechanism. http://togogenome.org/gene/1193502:SHALO_RS11335 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM12 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS02420 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGZ4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL1 family.|||Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.|||Part of the 50S ribosomal subunit.|||Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA. http://togogenome.org/gene/1193502:SHALO_RS07055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJK6 ^@ Similarity ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. http://togogenome.org/gene/1193502:SHALO_RS02320 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGV9 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/1193502:SHALO_RS00140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFR5 ^@ Similarity ^@ Belongs to the AAE transporter (TC 2.A.81) family. http://togogenome.org/gene/1193502:SHALO_RS10295 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLH8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the Maf family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. http://togogenome.org/gene/1193502:SHALO_RS07415 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJR2 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the anthranilate phosphoribosyltransferase family.|||Binds 2 magnesium ions per monomer.|||Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS02055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGR1 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system. http://togogenome.org/gene/1193502:SHALO_RS05760 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIX3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GTP-binding SRP family. FtsY subfamily.|||Cell membrane|||Cytoplasm|||Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.|||Membrane|||Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule. http://togogenome.org/gene/1193502:SHALO_RS08265 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK90 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the 'phage' integrase family. XerH subfamily.|||Cytoplasm|||Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. http://togogenome.org/gene/1193502:SHALO_RS08720 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKJ0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the anaerobic coproporphyrinogen-III oxidase family. HemW subfamily.|||Cytoplasm|||Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. http://togogenome.org/gene/1193502:SHALO_RS02760 ^@ http://purl.uniprot.org/uniprot/A0A1D7THL8 ^@ Cofactor|||Similarity ^@ Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.|||Binds 1 [2Fe-2S] cluster.|||Binds 1 [3Fe-4S] cluster.|||Binds 1 [4Fe-4S] cluster. http://togogenome.org/gene/1193502:SHALO_RS14585 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNS8 ^@ Subcellular Location Annotation ^@ Secreted http://togogenome.org/gene/1193502:SHALO_RS11160 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLX2 ^@ Similarity ^@ Belongs to the TPP enzyme family. http://togogenome.org/gene/1193502:SHALO_RS06120 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ21 ^@ Function|||Similarity|||Subunit ^@ Belongs to the NifW family.|||Homotrimer; associates with NifD.|||May protect the nitrogenase Fe-Mo protein from oxidative damage. http://togogenome.org/gene/1193502:SHALO_RS14100 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNR4 ^@ Similarity ^@ Belongs to the FrmR/RcnR family. http://togogenome.org/gene/1193502:SHALO_RS03425 ^@ http://purl.uniprot.org/uniprot/A0A1D7THF0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase delta chain family.|||Cell membrane|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction. http://togogenome.org/gene/1193502:SHALO_RS03655 ^@ http://purl.uniprot.org/uniprot/A0A1D7THN1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MntP (TC 9.B.29) family.|||Cell membrane|||Probably functions as a manganese efflux pump. http://togogenome.org/gene/1193502:SHALO_RS11500 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM27 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NrfD family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04270 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI63 ^@ Activity Regulation|||Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Allosterically activated by GTP. Inhibited by UTP.|||Belongs to the UMP kinase family.|||Catalyzes the reversible phosphorylation of UMP to UDP.|||Cytoplasm|||Homohexamer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS02450 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH07 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS7 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.|||Part of the 30S ribosomal subunit. Contacts proteins S9 and S11. http://togogenome.org/gene/1193502:SHALO_RS08145 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK56 ^@ Caution|||Function|||Similarity ^@ Belongs to the UbiX/PAD1 family.|||Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00075 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFM7 ^@ Similarity ^@ Belongs to the class-I fumarase family. http://togogenome.org/gene/1193502:SHALO_RS09750 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL48 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/1193502:SHALO_RS04800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIC7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NapD family.|||Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin-arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.|||Cytoplasm|||Interacts with the cytoplasmic NapA precursor. http://togogenome.org/gene/1193502:SHALO_RS01055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG83 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.|||Binds 1 zinc ion per subunit.|||Binds the 23S rRNA.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1193502:SHALO_RS03845 ^@ http://purl.uniprot.org/uniprot/A0A1D7THN6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NhaD Na(+)/H(+) (TC 2.A.62) antiporter family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07430 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJR1 ^@ Function|||Similarity ^@ Belongs to the sigma-54 factor family.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. http://togogenome.org/gene/1193502:SHALO_RS09935 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL68 ^@ Function|||Similarity|||Subunit ^@ Belongs to the helicase family. PriA subfamily.|||Component of the primosome.|||Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA. http://togogenome.org/gene/1193502:SHALO_RS01390 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGE3 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the thiolase-like superfamily. FabH family.|||Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.|||Cytoplasm|||Homodimer.|||The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH. http://togogenome.org/gene/1193502:SHALO_RS12435 ^@ http://purl.uniprot.org/uniprot/A0A1D7TML0 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SoxA family.|||Binds 2 heme groups per subunit.|||Heterodimer of SoxA and SoxX.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS09365 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL34 ^@ Similarity ^@ Belongs to the FrmR/RcnR family. http://togogenome.org/gene/1193502:SHALO_RS13895 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNE9 ^@ Function|||Similarity ^@ Belongs to the MoeA family.|||Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. http://togogenome.org/gene/1193502:SHALO_RS02570 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH46 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS00185 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFQ2 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS01910 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGP6 ^@ Similarity ^@ Belongs to the peptidase M24B family. http://togogenome.org/gene/1193502:SHALO_RS14360 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNQ0 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MnmA/TRMU family.|||Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS03415 ^@ http://purl.uniprot.org/uniprot/A0A1D7THN5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase B chain family.|||Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07015 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJI3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MgtC/SapB family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKQ2 ^@ Function ^@ Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif. http://togogenome.org/gene/1193502:SHALO_RS10070 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL92 ^@ Similarity ^@ Belongs to the AdoMet synthase family. http://togogenome.org/gene/1193502:SHALO_RS07050 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJM1 ^@ Similarity|||Subunit ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.|||Heterodimer of a large and a small subunit. http://togogenome.org/gene/1193502:SHALO_RS06385 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ86 ^@ PTM|||Similarity|||Subunit ^@ Belongs to the NifH/BchL/ChlL family.|||Homodimer.|||The reversible ADP-ribosylation of Arg inactivates the nitrogenase reductase and regulates nitrogenase activity. http://togogenome.org/gene/1193502:SHALO_RS10045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLD0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the class-I aminoacyl-tRNA synthetase family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS10510 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLM4 ^@ Function ^@ Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. http://togogenome.org/gene/1193502:SHALO_RS05045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TID6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the chaperonin (HSP60) family.|||Cytoplasm|||Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.|||Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. http://togogenome.org/gene/1193502:SHALO_RS06090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIY7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the MscS (TC 1.A.23) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS10800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLP2 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS07420 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJR6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TsaE family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS09125 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKS1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FGAMS family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.|||Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL. http://togogenome.org/gene/1193502:SHALO_RS13725 ^@ http://purl.uniprot.org/uniprot/A0A1D7TND4 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS07235 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJM9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M50B family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12150 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMI3 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL18 family.|||Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.|||This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. http://togogenome.org/gene/1193502:SHALO_RS10200 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLF0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the RNA methyltransferase TrmD family.|||Cytoplasm|||Homodimer.|||Specifically methylates guanosine-37 in various tRNAs. http://togogenome.org/gene/1193502:SHALO_RS11895 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM99 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS12055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TME1 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the transketolase family.|||Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).|||Binds 1 thiamine pyrophosphate per subunit.|||Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS13265 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNA2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS09000 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKN9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.|||Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only aminotransferase known to utilize SAM as an amino donor.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS05750 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIV4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FliL family.|||Cell inner membrane|||Controls the rotational direction of flagella during chemotaxis.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12325 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMK5 ^@ Cofactor|||Domain|||Function|||Similarity|||Subunit ^@ Belongs to the DnaG primase family.|||Binds 1 zinc ion per monomer.|||Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.|||Monomer. Interacts with DnaB.|||RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. http://togogenome.org/gene/1193502:SHALO_RS04730 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI69 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome c oxidase subunit 2 family.|||Binds a copper A center.|||Cell membrane|||Membrane|||Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). http://togogenome.org/gene/1193502:SHALO_RS01565 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGI7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NrfD family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07115 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJK0 ^@ Similarity ^@ Belongs to the HypE family. http://togogenome.org/gene/1193502:SHALO_RS06340 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJH9 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS04325 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI24 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NAD kinase family.|||Cytoplasm|||Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS05715 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ74 ^@ Similarity ^@ Belongs to the iron-sulfur dependent L-serine dehydratase family. http://togogenome.org/gene/1193502:SHALO_RS04175 ^@ http://purl.uniprot.org/uniprot/A0A1D7THU9 ^@ Similarity ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. http://togogenome.org/gene/1193502:SHALO_RS14590 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNT4 ^@ Similarity ^@ Belongs to the polysaccharide synthase family. http://togogenome.org/gene/1193502:SHALO_RS02655 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH58 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MscL family.|||Cell inner membrane|||Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.|||Homopentamer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11035 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLV6 ^@ Similarity ^@ Belongs to the hcp beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS12225 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMI4 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL4 family.|||Forms part of the polypeptide exit tunnel.|||One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1193502:SHALO_RS13450 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN90 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the formate dehydrogenase gamma subunit family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07215 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJK9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0056 (MarC) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11435 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM33 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS05755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIR9 ^@ Domain|||Function|||Similarity ^@ Belongs to the RecA family. RadA subfamily.|||DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.|||Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.|||The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease. http://togogenome.org/gene/1193502:SHALO_RS10750 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLN2 ^@ Similarity ^@ Belongs to the AOR/FOR family. http://togogenome.org/gene/1193502:SHALO_RS03330 ^@ http://purl.uniprot.org/uniprot/A0A1D7THI4 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the peptidase M20A family. DapE subfamily.|||Binds 2 Zn(2+) or Co(2+) ions per subunit.|||Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS03710 ^@ http://purl.uniprot.org/uniprot/A0A1D7THU5 ^@ Function|||Similarity ^@ Belongs to the RecR family.|||May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. http://togogenome.org/gene/1193502:SHALO_RS12125 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMG7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the IF-1 family.|||Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. http://togogenome.org/gene/1193502:SHALO_RS09015 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKW3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsZ family.|||Cytoplasm|||Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.|||Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins. http://togogenome.org/gene/1193502:SHALO_RS00580 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFZ2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AIR synthase family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS08530 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKF0 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the Nth/MutY family.|||Binds 1 [4Fe-4S] cluster.|||DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate. http://togogenome.org/gene/1193502:SHALO_RS02205 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGW1 ^@ Similarity ^@ Belongs to the LDH/MDH superfamily. http://togogenome.org/gene/1193502:SHALO_RS02140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGU0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.|||Cell inner membrane http://togogenome.org/gene/1193502:SHALO_RS07150 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJP5 ^@ Function|||Similarity ^@ Belongs to the LDH/MDH superfamily. MDH type 3 family.|||Catalyzes the reversible oxidation of malate to oxaloacetate. http://togogenome.org/gene/1193502:SHALO_RS01915 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH51 ^@ Function|||Similarity ^@ Belongs to the HPPK family.|||Catalyzes the transfer of pyrophosphate from adenosine triphosphate (ATP) to 6-hydroxymethyl-7,8-dihydropterin, an enzymatic step in folate biosynthesis pathway. http://togogenome.org/gene/1193502:SHALO_RS12955 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMX6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS04540 ^@ http://purl.uniprot.org/uniprot/A0A1D7TII8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04485 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI71 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS08590 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKF1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.|||Belongs to the KdsB family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS05680 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIT8 ^@ Function|||Similarity ^@ Belongs to the MinE family.|||Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. http://togogenome.org/gene/1193502:SHALO_RS12860 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMW5 ^@ Similarity ^@ Belongs to the ArsC family. http://togogenome.org/gene/1193502:SHALO_RS12180 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL14 family.|||Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8. http://togogenome.org/gene/1193502:SHALO_RS07885 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK07 ^@ Function|||Similarity ^@ Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. TrmA subfamily.|||Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA). http://togogenome.org/gene/1193502:SHALO_RS02435 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH44 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta chain family.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/1193502:SHALO_RS13820 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.|||Cell membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system and for the release of the potassium ions to the cytoplasm.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/1193502:SHALO_RS09715 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLA7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CpxP/Spy family.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS02910 ^@ http://purl.uniprot.org/uniprot/A0A1D7THQ0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00960 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG61 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 1 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. http://togogenome.org/gene/1193502:SHALO_RS04910 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIA4 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS04950 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIG2 ^@ Similarity ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. http://togogenome.org/gene/1193502:SHALO_RS01085 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG85 ^@ Similarity ^@ Belongs to the homoserine dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS08885 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKL4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the heat shock protein 90 family.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Molecular chaperone. Has ATPase activity. http://togogenome.org/gene/1193502:SHALO_RS05230 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIJ9 ^@ Similarity ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. http://togogenome.org/gene/1193502:SHALO_RS00065 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFP8 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the major facilitator superfamily. Bcr/CmlA family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS02755 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH78 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKR8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatC family.|||Cell membrane|||Membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/1193502:SHALO_RS14735 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNW5 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the enolase family.|||Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.|||Cell surface|||Cytoplasm|||Secreted|||The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein. http://togogenome.org/gene/1193502:SHALO_RS11715 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMG3 ^@ Similarity ^@ Belongs to the hemerythrin family. http://togogenome.org/gene/1193502:SHALO_RS12075 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMG1 ^@ Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PanD family.|||Binds 1 pyruvoyl group covalently per subunit.|||Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.|||Cytoplasm|||Heterooctamer of four alpha and four beta subunits.|||Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus. http://togogenome.org/gene/1193502:SHALO_RS00005 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFN0 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the DnaA family.|||Cytoplasm|||Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. http://togogenome.org/gene/1193502:SHALO_RS08220 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKA0 ^@ Similarity ^@ Belongs to the class-I fumarase family. http://togogenome.org/gene/1193502:SHALO_RS12635 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMQ7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.|||Cell inner membrane|||Membrane|||Probable transporter of a GTP-driven Fe(2+) uptake system. http://togogenome.org/gene/1193502:SHALO_RS13960 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNG2 ^@ Caution|||Function|||Similarity ^@ Belongs to the GART family.|||Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS02615 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH10 ^@ Similarity ^@ Belongs to the YkuD family. http://togogenome.org/gene/1193502:SHALO_RS11270 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLY9 ^@ Function|||Similarity|||Subunit ^@ Catalyzes the ADP transfer from ATP to D-glycero-beta-D-manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.|||Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate at the C-1 position to selectively form D-glycero-beta-D-manno-heptose-1,7-bisphosphate.|||Homodimer.|||In the C-terminal section; belongs to the cytidylyltransferase family.|||In the N-terminal section; belongs to the carbohydrate kinase PfkB family. http://togogenome.org/gene/1193502:SHALO_RS11575 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM39 ^@ Similarity ^@ Belongs to the UPF0178 family. http://togogenome.org/gene/1193502:SHALO_RS14085 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNI3 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS10870 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLQ4 ^@ Similarity ^@ Belongs to the peptidase S11 family. http://togogenome.org/gene/1193502:SHALO_RS11850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMB3 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS10850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLP6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.|||Cell inner membrane|||Cell membrane|||Membrane|||Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane. http://togogenome.org/gene/1193502:SHALO_RS09985 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL78 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Belongs to the ribulose-phosphate 3-epimerase family.|||Binds 1 divalent metal cation per subunit.|||Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS08280 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK97 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.|||Binds 1 divalent metal cation per subunit. Can use either Co(2+) or Zn(2+).|||Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS00830 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG98 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.|||Binds 2 Zn(2+) ions per subunit.|||Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS03760 ^@ http://purl.uniprot.org/uniprot/A0A1D7THV6 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Fur family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS13525 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN98 ^@ Similarity ^@ Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. http://togogenome.org/gene/1193502:SHALO_RS02015 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH72 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.|||Belongs to the topoisomerase GyrA/ParC subunit family.|||Belongs to the type II topoisomerase GyrA/ParC subunit family.|||Cytoplasm|||Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.|||Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis. http://togogenome.org/gene/1193502:SHALO_RS10240 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLD2 ^@ Similarity ^@ Belongs to the GTP cyclohydrolase I type 2/NIF3 family. http://togogenome.org/gene/1193502:SHALO_RS02395 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH00 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.|||Cytoplasm|||Monomer.|||This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis. http://togogenome.org/gene/1193502:SHALO_RS11985 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMD7 ^@ Cofactor|||Similarity|||Subcellular Location Annotation ^@ Belongs to the heme-copper respiratory oxidase family.|||Binds 1 copper ion per subunit, denoted as copper B.|||Binds 2 heme groups per subunit, denoted as high- and low-spin.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJW0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06650 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJD0 ^@ Function|||Similarity ^@ Belongs to the pseudouridine synthase TruD family.|||Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs. http://togogenome.org/gene/1193502:SHALO_RS01100 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGL6 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS09690 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL21 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/1193502:SHALO_RS14720 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNX0 ^@ Similarity ^@ Belongs to the citrate synthase family. http://togogenome.org/gene/1193502:SHALO_RS05695 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIZ7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14155 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNK9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS07655 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJW7 ^@ Function|||Similarity ^@ Belongs to the CbiD family.|||Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. http://togogenome.org/gene/1193502:SHALO_RS11770 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH0 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS02290 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGY0 ^@ Similarity ^@ Belongs to the D-glutamate cyclase family. http://togogenome.org/gene/1193502:SHALO_RS10015 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLG7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site.|||Cytoplasm|||In the C-terminal section; belongs to the helicase family. RecG subfamily.|||In the N-terminal section; belongs to the UvrB family. http://togogenome.org/gene/1193502:SHALO_RS00965 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG74 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 23 kDa subunit family.|||Binds 2 [4Fe-4S] clusters per subunit.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS10600 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLJ6 ^@ Activity Regulation|||Caution|||Domain|||Function|||Similarity ^@ Belongs to the GlnD family.|||Has four distinct domains: an N-terminal nucleotidyltransferase (NT) domain responsible for UTase activity, a central HD domain that encodes UR activity, and two C-terminal ACT domains that seem to have a role in glutamine sensing.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.|||Uridylyltransferase (UTase) activity is inhibited by glutamine, while glutamine activates uridylyl-removing (UR) activity. http://togogenome.org/gene/1193502:SHALO_RS10120 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLA4 ^@ Similarity ^@ Belongs to the helicase family. UvrD subfamily. http://togogenome.org/gene/1193502:SHALO_RS08365 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKJ3 ^@ Similarity|||Subunit ^@ Belongs to the glutaminase family.|||Homotetramer. http://togogenome.org/gene/1193502:SHALO_RS08715 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKI3 ^@ Function|||Similarity ^@ Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.|||Belongs to the Nudix hydrolase family. RppH subfamily. http://togogenome.org/gene/1193502:SHALO_RS08495 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKI7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the bacterial solute-binding protein 7 family.|||Homodimer.|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS12315 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMK1 ^@ Similarity|||Subunit ^@ Belongs to the RNase H family.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS09980 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL83 ^@ Similarity ^@ Belongs to the TrpF family. http://togogenome.org/gene/1193502:SHALO_RS08260 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKH5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS15185 ^@ http://purl.uniprot.org/uniprot/A0A1D7THE7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecE/SEC61-gamma family.|||Cell membrane|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. http://togogenome.org/gene/1193502:SHALO_RS11355 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM07 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter large permease family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/1193502:SHALO_RS01585 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGP7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NrfD family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS08150 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK67 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FlgA family.|||Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS10660 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLL1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the auxin efflux carrier (TC 2.A.69) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03435 ^@ http://purl.uniprot.org/uniprot/A0A1D7THY5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase gamma chain family.|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. http://togogenome.org/gene/1193502:SHALO_RS02335 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGW5 ^@ Similarity ^@ Belongs to the leucine-binding protein family. http://togogenome.org/gene/1193502:SHALO_RS12540 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMP6 ^@ Similarity ^@ Belongs to the PspA/IM30 family. http://togogenome.org/gene/1193502:SHALO_RS12020 ^@ http://purl.uniprot.org/uniprot/A0A1D7TML9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliJ family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09785 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL40 ^@ Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family. http://togogenome.org/gene/1193502:SHALO_RS03065 ^@ http://purl.uniprot.org/uniprot/A0A1D7THE6 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/1193502:SHALO_RS07890 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK71 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS06235 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJG2 ^@ Similarity ^@ Belongs to the RelB/DinJ antitoxin family. http://togogenome.org/gene/1193502:SHALO_RS04165 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI43 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS12660 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMS7 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/1193502:SHALO_RS12080 ^@ http://purl.uniprot.org/uniprot/A0A1D7TME0 ^@ Caution|||Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurCDEF family. MurE subfamily.|||Carboxylation is probably crucial for Mg(2+) binding and, consequently, for the gamma-phosphate positioning of ATP.|||Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS10395 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLI7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glycosyltransferase 28 family. MurG subfamily.|||Cell membrane|||Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS03875 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI64 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the polyribonucleotide nucleotidyltransferase family.|||Cytoplasm|||Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction. http://togogenome.org/gene/1193502:SHALO_RS01110 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG86 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Binds 1 Mg(2+) ion per subunit.|||Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.|||In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00040 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFP3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.|||Cytoplasm|||Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. http://togogenome.org/gene/1193502:SHALO_RS00570 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFY9 ^@ Similarity ^@ Belongs to the type III secretion exporter family. http://togogenome.org/gene/1193502:SHALO_RS06075 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIX8 ^@ Function|||Similarity ^@ Belongs to the NifD/NifK/NifE/NifN family.|||This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor). http://togogenome.org/gene/1193502:SHALO_RS12785 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMT3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0060 family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS02125 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH92 ^@ Subcellular Location Annotation ^@ Secreted http://togogenome.org/gene/1193502:SHALO_RS13195 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN39 ^@ Similarity ^@ Belongs to the DNA polymerase type-Y family. http://togogenome.org/gene/1193502:SHALO_RS11295 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLY3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS08865 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKU1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PurS family.|||Cytoplasm|||Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.|||Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL. http://togogenome.org/gene/1193502:SHALO_RS01440 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGF1 ^@ Function|||Similarity ^@ Belongs to the NadC/ModD family.|||Involved in the catabolism of quinolinic acid (QA). http://togogenome.org/gene/1193502:SHALO_RS06055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIX6 ^@ Similarity ^@ In the N-terminal section; belongs to the zinc metallo-hydrolase group 3 family. http://togogenome.org/gene/1193502:SHALO_RS13215 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN97 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB family.|||Cell inner membrane http://togogenome.org/gene/1193502:SHALO_RS12025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylosuccinate synthetase family.|||Binds 1 Mg(2+) ion per subunit.|||Cytoplasm|||Homodimer.|||Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP. http://togogenome.org/gene/1193502:SHALO_RS01280 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGD3 ^@ Similarity ^@ Belongs to the GSP E family. http://togogenome.org/gene/1193502:SHALO_RS04440 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIG9 ^@ Similarity ^@ Belongs to the transglycosylase Slt family. http://togogenome.org/gene/1193502:SHALO_RS14185 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNN8 ^@ Caution ^@ Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00940 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG36 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 49 kDa subunit family.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS02090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGR2 ^@ Similarity ^@ Belongs to the N(4)/N(6)-methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS10195 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLG0 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bL19 family.|||This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. http://togogenome.org/gene/1193502:SHALO_RS09850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL71 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIW9 ^@ Function|||Similarity ^@ Belongs to the radical SAM superfamily. NifB family.|||Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster. http://togogenome.org/gene/1193502:SHALO_RS02915 ^@ http://purl.uniprot.org/uniprot/A0A1D7THB8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NusA family.|||Cytoplasm|||Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.|||Participates in both transcription termination and antitermination. http://togogenome.org/gene/1193502:SHALO_RS11185 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLZ3 ^@ Caution|||Function|||Similarity ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.|||Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS12495 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMM7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0719 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN05 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06695 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJB1 ^@ Function|||Similarity ^@ Belongs to the Thz kinase family.|||Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ). http://togogenome.org/gene/1193502:SHALO_RS01990 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGR8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.|||Binds 2 Mg(2+) ions per subunit.|||Cytoplasm|||Homohexamer.|||Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P). http://togogenome.org/gene/1193502:SHALO_RS10830 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLR7 ^@ Similarity ^@ Belongs to the NadC/ModD family. http://togogenome.org/gene/1193502:SHALO_RS01430 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGG1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PlsY family.|||Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.|||Cell membrane|||Probably interacts with PlsX. http://togogenome.org/gene/1193502:SHALO_RS05800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIW4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06980 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJG1 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Binds 1 Mg(2+) ion per subunit.|||Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.|||Cytoplasm|||Homotrimer.|||In the C-terminal section; belongs to the transferase hexapeptide repeat family.|||In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS02955 ^@ http://purl.uniprot.org/uniprot/A0A1D7THR0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methylthiotransferase family. RimO subfamily.|||Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS01060 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG79 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RsmI family.|||Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS07985 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK29 ^@ Similarity ^@ Belongs to the TrpC family. http://togogenome.org/gene/1193502:SHALO_RS10530 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLS3 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS11465 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM29 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-2 integral membrane protein family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11380 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM46 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MnmG family.|||Cytoplasm|||Homodimer. Heterotetramer of two MnmE and two MnmG subunits.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. http://togogenome.org/gene/1193502:SHALO_RS02750 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH30 ^@ Function|||Subcellular Location Annotation ^@ Cell inner membrane|||The fumarate reductase enzyme complex is required for fumarate respiration. This subunit anchors the complex in the membrane and binds a diheme cytochrome b. http://togogenome.org/gene/1193502:SHALO_RS05910 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIV7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the DHBP synthase family.|||Binds 2 divalent metal cations per subunit. Magnesium or manganese.|||Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.|||Homodimer.|||In the C-terminal section; belongs to the GTP cyclohydrolase II family.|||In the N-terminal section; belongs to the DHBP synthase family. http://togogenome.org/gene/1193502:SHALO_RS02815 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH45 ^@ Similarity ^@ Belongs to the universal ribosomal protein uS2 family. http://togogenome.org/gene/1193502:SHALO_RS03375 ^@ http://purl.uniprot.org/uniprot/A0A1D7THD7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bL21 family.|||Part of the 50S ribosomal subunit. Contacts protein L20.|||This protein binds to 23S rRNA in the presence of protein L20. http://togogenome.org/gene/1193502:SHALO_RS02710 ^@ http://purl.uniprot.org/uniprot/A0A1D7THK9 ^@ Similarity ^@ Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/1193502:SHALO_RS05535 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIN3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family.|||Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS12210 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH3 ^@ Function|||Similarity ^@ Belongs to the universal ribosomal protein uS19 family.|||Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. http://togogenome.org/gene/1193502:SHALO_RS08470 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKC8 ^@ Similarity ^@ Belongs to the trans-sulfuration enzymes family. http://togogenome.org/gene/1193502:SHALO_RS07850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK04 ^@ Cofactor|||Similarity ^@ Belongs to the aconitase/IPM isomerase family.|||Binds 1 [4Fe-4S] cluster per subunit. http://togogenome.org/gene/1193502:SHALO_RS01165 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGA9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the thioester dehydratase family. FabZ subfamily.|||Cytoplasm|||Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. http://togogenome.org/gene/1193502:SHALO_RS07380 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJQ3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.|||Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.|||Cell membrane|||Cytoplasm|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS02650 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH19 ^@ Function|||Similarity|||Subunit ^@ Belongs to the iron/manganese superoxide dismutase family.|||Destroys radicals which are normally produced within the cells and which are toxic to biological systems.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS09995 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLC1 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ArgJ family.|||Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.|||Cytoplasm|||Heterotetramer of two alpha and two beta chains.|||Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway. http://togogenome.org/gene/1193502:SHALO_RS10390 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLK5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS09655 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL28 ^@ Similarity ^@ Belongs to the phosphate/phosphite/phosphonate binding protein family. http://togogenome.org/gene/1193502:SHALO_RS14245 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNP2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14125 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNJ3 ^@ Similarity ^@ Belongs to the flavin oxidoreductase frp family. http://togogenome.org/gene/1193502:SHALO_RS08450 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKC4 ^@ Domain|||Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the glutamyl-tRNA reductase family.|||Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).|||During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.|||Homodimer.|||Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization. http://togogenome.org/gene/1193502:SHALO_RS01495 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGF4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RimP family.|||Cytoplasm|||Required for maturation of 30S ribosomal subunits. http://togogenome.org/gene/1193502:SHALO_RS00500 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFW9 ^@ Similarity ^@ Belongs to the aspartate/glutamate racemases family. http://togogenome.org/gene/1193502:SHALO_RS07305 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJS0 ^@ Similarity ^@ Belongs to the acylphosphatase family. http://togogenome.org/gene/1193502:SHALO_RS07315 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJN1 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||Homohexamer.|||In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.|||In the N-terminal section; belongs to the CobB/CobQ family.|||Involved in acetate metabolism.|||The N-terminal region seems to be important for proper quaternary structure. The C-terminal region contains the substrate-binding site. http://togogenome.org/gene/1193502:SHALO_RS05915 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ40 ^@ Similarity ^@ Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. http://togogenome.org/gene/1193502:SHALO_RS05545 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIW8 ^@ Similarity ^@ Belongs to the LacAB/RpiB family. http://togogenome.org/gene/1193502:SHALO_RS04575 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI77 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS01905 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGN1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the type-II 3-dehydroquinase family.|||Catalyzes a trans-dehydration via an enolate intermediate.|||Homododecamer. http://togogenome.org/gene/1193502:SHALO_RS09780 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL43 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Bacterial flagellum basal body|||Belongs to the flagella basal body rod proteins family.|||The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each. http://togogenome.org/gene/1193502:SHALO_RS01810 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH34 ^@ Subcellular Location Annotation ^@ Periplasm http://togogenome.org/gene/1193502:SHALO_RS02785 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH53 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RuvB family.|||Forms a complex with RuvA.|||The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. http://togogenome.org/gene/1193502:SHALO_RS01050 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGK8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the RNA methyltransferase RsmE family.|||Cytoplasm|||Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. http://togogenome.org/gene/1193502:SHALO_RS02895 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH88 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the phosphoglycerate kinase family.|||Cytoplasm|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS00165 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG35 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS12190 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMG2 ^@ Similarity ^@ Belongs to the universal ribosomal protein uL29 family. http://togogenome.org/gene/1193502:SHALO_RS10505 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLI4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the CitD family.|||Covalent carrier of the coenzyme of citrate lyase.|||Cytoplasm|||Oligomer with a subunit composition of (alpha,beta,gamma)6. http://togogenome.org/gene/1193502:SHALO_RS02410 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGX9 ^@ Function|||Similarity ^@ Belongs to the NusG family.|||Participates in transcription elongation, termination and antitermination. http://togogenome.org/gene/1193502:SHALO_RS00585 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFX3 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CoaE family.|||Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS11055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLU9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.|||Belongs to the AAA ATPase family.|||Binds 1 zinc ion per subunit.|||Cell membrane|||Homohexamer.|||In the C-terminal section; belongs to the peptidase M41 family.|||In the central section; belongs to the AAA ATPase family. http://togogenome.org/gene/1193502:SHALO_RS12220 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMQ2 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL23 family.|||One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.|||Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome. http://togogenome.org/gene/1193502:SHALO_RS15035 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP18 ^@ Similarity ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. http://togogenome.org/gene/1193502:SHALO_RS02600 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH13 ^@ Function|||Similarity ^@ In the C-terminal section; belongs to the complex I 49 kDa subunit family.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS12695 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMT7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MntP (TC 9.B.29) family.|||Cell membrane|||Probably functions as a manganese efflux pump. http://togogenome.org/gene/1193502:SHALO_RS11700 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM67 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.|||Cell membrane|||Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system).|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01720 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGM2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS06480 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJA4 ^@ Similarity ^@ Belongs to the hcp beta-lactamase family. http://togogenome.org/gene/1193502:SHALO_RS01225 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG87 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SurE nucleotidase family.|||Binds 1 divalent metal cation per subunit.|||Cytoplasm|||Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates. http://togogenome.org/gene/1193502:SHALO_RS03730 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI35 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the shikimate dehydrogenase family.|||Homodimer.|||Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS07590 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJU8 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CobD/CbiB family.|||Cell membrane|||Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNJ6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. DIT1 subfamily.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01655 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGY1 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenine deaminase type 2 subfamily.|||Binds 1 zinc ion per subunit.|||Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. http://togogenome.org/gene/1193502:SHALO_RS15175 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP51 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the RuvC family.|||Binds 1 Mg(2+) ion per subunit.|||Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. http://togogenome.org/gene/1193502:SHALO_RS11475 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM21 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the dTDP-4-dehydrorhamnose reductase family.|||Binds 1 Mg(2+) ion per monomer.|||Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. http://togogenome.org/gene/1193502:SHALO_RS08570 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKE8 ^@ Similarity ^@ Belongs to the DegT/DnrJ/EryC1 family. http://togogenome.org/gene/1193502:SHALO_RS02035 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGQ1 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the aspartate-semialdehyde dehydrogenase family.|||Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS14905 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP26 ^@ Function|||Similarity|||Subunit ^@ Belongs to the MoaC family.|||Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).|||Homohexamer; trimer of dimers. http://togogenome.org/gene/1193502:SHALO_RS03315 ^@ http://purl.uniprot.org/uniprot/A0A1D7THL9 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS00220 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFR7 ^@ Similarity ^@ Belongs to the MEMO1 family. http://togogenome.org/gene/1193502:SHALO_RS09370 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKW4 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS05550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIR5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M50B family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00010 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFN8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the beta sliding clamp family.|||Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.|||Cytoplasm|||Forms a ring-shaped head-to-tail homodimer around DNA. http://togogenome.org/gene/1193502:SHALO_RS04010 ^@ http://purl.uniprot.org/uniprot/A0A1D7THR9 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS02345 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGY3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS09930 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL73 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the IspG family.|||Binds 1 [4Fe-4S] cluster.|||Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. http://togogenome.org/gene/1193502:SHALO_RS10205 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLD9 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.|||Belongs to the RimM family.|||Binds ribosomal protein S19.|||Cytoplasm|||The PRC barrel domain binds ribosomal protein S19. http://togogenome.org/gene/1193502:SHALO_RS08340 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKF5 ^@ Similarity ^@ Belongs to the pseudouridine synthase RsuA family. http://togogenome.org/gene/1193502:SHALO_RS13845 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF1 ^@ Similarity ^@ Belongs to the short-chain dehydrogenases/reductases (SDR) family. http://togogenome.org/gene/1193502:SHALO_RS10605 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLJ9 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS05480 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIQ1 ^@ Function|||Similarity ^@ Belongs to the vitamin-B12 independent methionine synthase family.|||Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation. http://togogenome.org/gene/1193502:SHALO_RS12775 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMT1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS11360 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM06 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TRAP transporter small permease family.|||Cell inner membrane|||Membrane|||Part of the tripartite ATP-independent periplasmic (TRAP) transport system.|||The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins. http://togogenome.org/gene/1193502:SHALO_RS03180 ^@ http://purl.uniprot.org/uniprot/A0A1D7THA9 ^@ Function|||Similarity ^@ Antitoxin component of a type II toxin-antitoxin (TA) system.|||Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/1193502:SHALO_RS12595 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMP2 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Fur family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS04005 ^@ http://purl.uniprot.org/uniprot/A0A1D7THV8 ^@ Caution|||Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.|||Binds 1 Mn(2+) ion per subunit.|||Cytoplasm|||Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS01310 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC6 ^@ Similarity|||Subunit ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS04305 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI22 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the adenylate kinase family.|||Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.|||Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS05570 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIN6 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS09550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL06 ^@ Similarity ^@ Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. http://togogenome.org/gene/1193502:SHALO_RS03410 ^@ http://purl.uniprot.org/uniprot/A0A1D7THH7 ^@ Function|||Similarity ^@ Belongs to the ParB family.|||Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication. http://togogenome.org/gene/1193502:SHALO_RS09010 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKP4 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the FtsA/MreB family.|||Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.|||Cell membrane|||Self-interacts. Interacts with FtsZ. http://togogenome.org/gene/1193502:SHALO_RS08945 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKR9 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/1193502:SHALO_RS07145 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJJ9 ^@ Cofactor|||Similarity ^@ Belongs to the monomeric-type IDH family.|||Binds 1 Mg(2+) or Mn(2+) ion per subunit. http://togogenome.org/gene/1193502:SHALO_RS02645 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH39 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. http://togogenome.org/gene/1193502:SHALO_RS01635 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGR0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the XseA family.|||Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.|||Cytoplasm|||Heterooligomer composed of large and small subunits. http://togogenome.org/gene/1193502:SHALO_RS11570 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM53 ^@ Similarity ^@ Belongs to the DEAD box helicase family. http://togogenome.org/gene/1193502:SHALO_RS00560 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFZ3 ^@ Function ^@ DNA-dependent ATPase that plays important roles in cellular responses to stalled DNA replication processes. http://togogenome.org/gene/1193502:SHALO_RS06300 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ59 ^@ Similarity ^@ In the C-terminal section; belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/1193502:SHALO_RS14515 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNZ0 ^@ Function|||Similarity ^@ Belongs to the MqnA/MqnD family. MqnA subfamily.|||Catalyzes the dehydration of chorismate into 3-[(1-carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). http://togogenome.org/gene/1193502:SHALO_RS00695 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFZ7 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the bacterial diacylglycerol kinase family.|||Catalyzes the ATP-dependent phosphorylation of sn-l,2-diacylglycerol (DAG) to phosphatidic acid. Involved in the recycling of diacylglycerol produced as a by-product during membrane-derived oligosaccharide (MDO) biosynthesis.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09155 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKS4 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS07155 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJM7 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the succinate/malate CoA ligase beta subunit family.|||Binds 1 Mg(2+) ion per subunit.|||Heterotetramer of two alpha and two beta subunits.|||Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. http://togogenome.org/gene/1193502:SHALO_RS14635 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNT8 ^@ Similarity ^@ Belongs to the asparagine synthetase family. http://togogenome.org/gene/1193502:SHALO_RS03155 ^@ http://purl.uniprot.org/uniprot/A0A1D7THF4 ^@ Function|||Similarity ^@ Antitoxin component of a type II toxin-antitoxin (TA) system.|||Belongs to the phD/YefM antitoxin family. http://togogenome.org/gene/1193502:SHALO_RS02725 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH66 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS02605 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH48 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 20 kDa subunit family.|||Binds 1 [4Fe-4S] cluster.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS12215 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMI5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL2 family.|||One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.|||Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome. http://togogenome.org/gene/1193502:SHALO_RS14830 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNY3 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MGMT family.|||Cytoplasm|||Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.|||This enzyme catalyzes only one turnover and therefore is not strictly catalytic. According to one definition, an enzyme is a biocatalyst that acts repeatedly and over many reaction cycles. http://togogenome.org/gene/1193502:SHALO_RS15120 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP23 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FliL family.|||Cell inner membrane|||Controls the rotational direction of flagella during chemotaxis.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11545 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM45 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0014 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12310 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMJ3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ribonuclease III family.|||Cytoplasm|||Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS11425 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM13 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the BPG-independent phosphoglycerate mutase family.|||Binds 2 manganese ions per subunit.|||Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS02415 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH18 ^@ Function|||PTM|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL11 family.|||Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.|||One or more lysine residues are methylated.|||Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/1193502:SHALO_RS03390 ^@ http://purl.uniprot.org/uniprot/A0A1D7THE9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the glutamate 5-kinase family.|||Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS02810 ^@ http://purl.uniprot.org/uniprot/A0A1D7THN0 ^@ Similarity ^@ Belongs to the MlaA family. http://togogenome.org/gene/1193502:SHALO_RS09855 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL69 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.|||Cell inner membrane|||Membrane|||Probable transporter of a GTP-driven Fe(2+) uptake system. http://togogenome.org/gene/1193502:SHALO_RS06645 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJE1 ^@ Caution|||Function|||Miscellaneous|||Similarity ^@ Belongs to the thiamine-monophosphate kinase family.|||Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate. http://togogenome.org/gene/1193502:SHALO_RS10215 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLK3 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS16 family. http://togogenome.org/gene/1193502:SHALO_RS06975 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJI8 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Binds 1 FMN per subunit.|||Catalyzes two sequential steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine. In the second step the latter compound is decarboxylated to form 4'-phosphopantotheine.|||Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine.|||In the C-terminal section; belongs to the PPC synthetase family.|||In the N-terminal section; belongs to the HFCD (homo-oligomeric flavin containing Cys decarboxylase) superfamily.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00625 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG62 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase A8 family.|||Cell membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||This protein specifically catalyzes the removal of signal peptides from prolipoproteins. http://togogenome.org/gene/1193502:SHALO_RS13420 ^@ http://purl.uniprot.org/uniprot/A0A1D7TND7 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the CrcB (TC 9.B.71) family.|||Cell membrane|||Important for reducing fluoride concentration in the cell, thus reducing its toxicity.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13840 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNE0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS05645 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIZ0 ^@ Caution|||Function|||Subunit ^@ Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. http://togogenome.org/gene/1193502:SHALO_RS12105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS4 family.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.|||Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S5 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/1193502:SHALO_RS05725 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIW5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the UPF0126 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00505 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFX8 ^@ Function|||Similarity ^@ Belongs to the ribonucleoside diphosphate reductase large chain family.|||Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. http://togogenome.org/gene/1193502:SHALO_RS06140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ00 ^@ Function|||Similarity ^@ Belongs to the sigma-54 factor family.|||Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. http://togogenome.org/gene/1193502:SHALO_RS14550 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNS7 ^@ Function ^@ This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. http://togogenome.org/gene/1193502:SHALO_RS09585 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL01 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12235 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMI7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS10 family.|||Involved in the binding of tRNA to the ribosomes.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/1193502:SHALO_RS12275 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMJ0 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS11210 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLY0 ^@ Function|||Similarity ^@ Belongs to the glucose-1-phosphate thymidylyltransferase family.|||Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. http://togogenome.org/gene/1193502:SHALO_RS12680 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMS1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell inner membrane|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04335 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI38 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the lactate permease family.|||Cell inner membrane|||Membrane|||Uptake of L-lactate across the membrane. Can also transport D-lactate and glycolate. http://togogenome.org/gene/1193502:SHALO_RS14340 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNR8 ^@ Similarity ^@ Belongs to the sulfur carrier protein TusA family. http://togogenome.org/gene/1193502:SHALO_RS02135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGV2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06955 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJI1 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the tRNA pseudouridine synthase TruA family.|||Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS05805 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIS9 ^@ Function|||Similarity ^@ Belongs to the cyclophilin-type PPIase family.|||PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. http://togogenome.org/gene/1193502:SHALO_RS03440 ^@ http://purl.uniprot.org/uniprot/A0A1D7THG2 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ATPase alpha/beta chains family.|||Cell membrane|||Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. http://togogenome.org/gene/1193502:SHALO_RS11490 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM62 ^@ Similarity|||Subunit ^@ Belongs to the NAD(P)-dependent epimerase/dehydratase family.|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS02885 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH75 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Iojap/RsfS family.|||Belongs to the NadD family.|||Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).|||Cytoplasm|||Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.|||Interacts with ribosomal protein L14 (rplN). http://togogenome.org/gene/1193502:SHALO_RS07120 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJT3 ^@ Function|||Similarity ^@ Belongs to the HypA/HybF family.|||Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. http://togogenome.org/gene/1193502:SHALO_RS13670 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNC7 ^@ Similarity ^@ Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. http://togogenome.org/gene/1193502:SHALO_RS01230 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGB8 ^@ Function|||Similarity ^@ Belongs to the LpxB family.|||Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. http://togogenome.org/gene/1193502:SHALO_RS07275 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJW1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the MurJ/MviN family.|||Cell inner membrane|||Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00600 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFZ1 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the prokaryotic/mitochondrial release factor family.|||Cytoplasm|||Methylated by PrmC. Methylation increases the termination efficiency of RF1.|||Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. http://togogenome.org/gene/1193502:SHALO_RS12935 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMW1 ^@ Similarity ^@ Belongs to the UPF0251 family. http://togogenome.org/gene/1193502:SHALO_RS02580 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGZ1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 2 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS14710 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNV6 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the type IA topoisomerase family.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer.|||Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone. http://togogenome.org/gene/1193502:SHALO_RS09665 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL97 ^@ Similarity ^@ Belongs to the phosphate/phosphite/phosphonate binding protein family. http://togogenome.org/gene/1193502:SHALO_RS15045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP29 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/1193502:SHALO_RS00970 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG37 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 6 family.|||Cell membrane|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS08455 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKC9 ^@ Similarity ^@ Belongs to the FPP/GGPP synthase family. http://togogenome.org/gene/1193502:SHALO_RS08225 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK84 ^@ Similarity ^@ Belongs to the class-I fumarase family. http://togogenome.org/gene/1193502:SHALO_RS12195 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF5 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL16 family.|||Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.|||Part of the 50S ribosomal subunit. http://togogenome.org/gene/1193502:SHALO_RS15170 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP33 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the thymidylate synthase ThyX family.|||Binds 4 FAD per tetramer. Each FAD binding site is formed by three monomers.|||Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.|||Homotetramer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS07065 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJI9 ^@ Similarity ^@ Belongs to the peptidase A31 family. http://togogenome.org/gene/1193502:SHALO_RS12300 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMK8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Probable transporter of a GTP-driven Fe(2+) uptake system. http://togogenome.org/gene/1193502:SHALO_RS11780 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM80 ^@ Similarity ^@ Belongs to the PTPS family. QueD subfamily. http://togogenome.org/gene/1193502:SHALO_RS08710 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKQ8 ^@ Similarity ^@ Belongs to the aspartokinase family. http://togogenome.org/gene/1193502:SHALO_RS07060 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJI2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HupC/HyaC/HydC family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS04000 ^@ http://purl.uniprot.org/uniprot/A0A1D7THX4 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS15135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP36 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.|||Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.|||Cytoplasm|||Monomer. http://togogenome.org/gene/1193502:SHALO_RS13965 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNI7 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ThiG family.|||Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.|||Cytoplasm|||Homotetramer. Forms heterodimers with either ThiH or ThiS. http://togogenome.org/gene/1193502:SHALO_RS00665 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG11 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bS21 family. http://togogenome.org/gene/1193502:SHALO_RS05050 ^@ http://purl.uniprot.org/uniprot/A0A1D7TII3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the GroES chaperonin family.|||Cytoplasm|||Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.|||Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. http://togogenome.org/gene/1193502:SHALO_RS09480 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKY9 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/1193502:SHALO_RS14870 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNZ8 ^@ Caution|||Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the MobA family.|||Cytoplasm|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Monomer.|||The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.|||Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. http://togogenome.org/gene/1193502:SHALO_RS08125 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK64 ^@ Function|||Similarity ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.|||Catalyzes the biosynthesis of agmatine from arginine. http://togogenome.org/gene/1193502:SHALO_RS03445 ^@ http://purl.uniprot.org/uniprot/A0A1D7THM0 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase epsilon chain family.|||Cell membrane|||F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.|||Membrane|||Produces ATP from ADP in the presence of a proton gradient across the membrane. http://togogenome.org/gene/1193502:SHALO_RS10705 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLP3 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS10090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLA0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the ClpS family.|||Binds to the N-terminal domain of the chaperone ClpA.|||Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation. http://togogenome.org/gene/1193502:SHALO_RS09110 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKR0 ^@ Similarity ^@ Belongs to the peptidase C40 family. http://togogenome.org/gene/1193502:SHALO_RS04275 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI08 ^@ Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase subunit omega family.|||Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/1193502:SHALO_RS10840 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLP8 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein ModA family. http://togogenome.org/gene/1193502:SHALO_RS12375 ^@ http://purl.uniprot.org/uniprot/A0A1D7TML3 ^@ Function ^@ Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. http://togogenome.org/gene/1193502:SHALO_RS11075 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLU6 ^@ Function|||Subcellular Location Annotation|||Subunit ^@ Cytoplasm|||Heterodimer of HisH and HisF.|||IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. http://togogenome.org/gene/1193502:SHALO_RS00815 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG40 ^@ Similarity ^@ Belongs to the P(II) protein family. http://togogenome.org/gene/1193502:SHALO_RS13175 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN12 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS05250 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIJ8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.|||Cell inner membrane http://togogenome.org/gene/1193502:SHALO_RS08160 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK69 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS10520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLK4 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS02965 ^@ http://purl.uniprot.org/uniprot/A0A1D7THC8 ^@ Function|||PTM|||Similarity|||Subcellular Location Annotation ^@ Belongs to the prokaryotic/mitochondrial release factor family.|||Cytoplasm|||Methylated by PrmC. Methylation increases the termination efficiency of RF2.|||Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. http://togogenome.org/gene/1193502:SHALO_RS03490 ^@ http://purl.uniprot.org/uniprot/A0A1D7THH2 ^@ Similarity ^@ Belongs to the fabD family. http://togogenome.org/gene/1193502:SHALO_RS11315 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLZ4 ^@ Function|||Miscellaneous|||Similarity|||Subunit ^@ Belongs to the peroxiredoxin family. Tpx subfamily.|||Homodimer.|||The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this atypical 2-Cys peroxiredoxin, C(R) is present in the same subunit to form an intramolecular disulfide. The disulfide is subsequently reduced by thioredoxin.|||Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. http://togogenome.org/gene/1193502:SHALO_RS03380 ^@ http://purl.uniprot.org/uniprot/A0A1D7THJ3 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL27 family. http://togogenome.org/gene/1193502:SHALO_RS00985 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG68 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the complex I subunit 4 family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00880 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGA7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ABC-3 integral membrane protein family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03420 ^@ http://purl.uniprot.org/uniprot/A0A1D7THJ2 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the ATPase B chain family.|||Cell membrane|||Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.|||F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.|||F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS02440 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGZ5 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the RNA polymerase beta' chain family.|||Binds 1 Mg(2+) ion per subunit.|||Binds 2 Zn(2+) ions per subunit.|||DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.|||The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription. http://togogenome.org/gene/1193502:SHALO_RS07320 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJN8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the acetokinase family.|||Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.|||Cytoplasm|||Homodimer.|||Mg(2+). Can also accept Mn(2+). http://togogenome.org/gene/1193502:SHALO_RS12950 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMX2 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NlpA lipoprotein family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03280 ^@ http://purl.uniprot.org/uniprot/A0A1D7THH5 ^@ Function|||Similarity|||Subunit ^@ Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).|||Belongs to the amidase family. GatA subfamily.|||Heterotrimer of A, B and C subunits. http://togogenome.org/gene/1193502:SHALO_RS08615 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKN7 ^@ Function|||Induction|||Similarity ^@ Acts as a chaperone.|||Belongs to the heat shock protein 70 family.|||By stress conditions e.g. heat shock. http://togogenome.org/gene/1193502:SHALO_RS14800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNX6 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03470 ^@ http://purl.uniprot.org/uniprot/A0A1D7THJ9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the Pal lipoprotein family.|||Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.|||The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer. http://togogenome.org/gene/1193502:SHALO_RS00770 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFZ8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS10105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLB8 ^@ Function|||Similarity ^@ Belongs to the GHMP kinase family. IspE subfamily.|||Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. http://togogenome.org/gene/1193502:SHALO_RS10825 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLS7 ^@ Similarity ^@ Belongs to the IMPACT family. http://togogenome.org/gene/1193502:SHALO_RS07230 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJN7 ^@ Function|||Similarity ^@ Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.|||Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis. http://togogenome.org/gene/1193502:SHALO_RS06800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJC8 ^@ Similarity ^@ Belongs to the DNA photolyase family. http://togogenome.org/gene/1193502:SHALO_RS13370 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNC8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB family.|||Cell inner membrane http://togogenome.org/gene/1193502:SHALO_RS00590 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFX5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the diaminopimelate epimerase family.|||Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS03545 ^@ http://purl.uniprot.org/uniprot/A0A1D7THN9 ^@ Function|||Similarity ^@ Belongs to the dus family.|||Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. http://togogenome.org/gene/1193502:SHALO_RS07685 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJX5 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS10975 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLS6 ^@ Function|||Similarity ^@ Belongs to the OMP decarboxylase family.|||Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). http://togogenome.org/gene/1193502:SHALO_RS03830 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI59 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UvrC family.|||Cytoplasm|||Interacts with UvrB in an incision complex.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. http://togogenome.org/gene/1193502:SHALO_RS09135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKR3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the TatB family.|||Cell membrane|||Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.|||The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon. http://togogenome.org/gene/1193502:SHALO_RS13455 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN66 ^@ Function ^@ Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. http://togogenome.org/gene/1193502:SHALO_RS07390 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJR0 ^@ Activity Regulation|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.|||Allosterically activated by HslU binding.|||Belongs to the peptidase T1B family. HslV subfamily.|||Cytoplasm|||Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. http://togogenome.org/gene/1193502:SHALO_RS07670 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJW6 ^@ Similarity ^@ Belongs to the precorrin methyltransferase family. http://togogenome.org/gene/1193502:SHALO_RS04770 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIG1 ^@ Caution|||Cofactor|||Function|||PTM|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.|||Binds 1 [4Fe-4S] cluster.|||Binds 1 molybdenum-bis(molybdopterin guanine dinucleotide) (Mo-bis-MGD) cofactor per subunit.|||Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.|||Component of the periplasmic nitrate reductase NapAB complex composed of NapA and NapB.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Periplasm|||Predicted to be exported by the Tat system. The position of the signal peptide cleavage has not been experimentally proven. http://togogenome.org/gene/1193502:SHALO_RS09250 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKU9 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS13835 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNF5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.|||Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS01140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG75 ^@ Function|||Similarity ^@ Acts on leucine, isoleucine and valine.|||Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/1193502:SHALO_RS03455 ^@ http://purl.uniprot.org/uniprot/A0A1D7THF8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell inner membrane|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13230 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN25 ^@ Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the selenophosphate synthase 1 family. Class I subfamily.|||Binds 1 Mg(2+) ion per monomer.|||Homodimer.|||Synthesizes selenophosphate from selenide and ATP. http://togogenome.org/gene/1193502:SHALO_RS05345 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIS5 ^@ Similarity ^@ Belongs to the hemerythrin family. http://togogenome.org/gene/1193502:SHALO_RS08780 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKJ5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.|||Cell inner membrane|||Cell membrane|||Membrane|||Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons. http://togogenome.org/gene/1193502:SHALO_RS11060 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLV1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the methyltransferase superfamily. PrmA family.|||Cytoplasm|||Methylates ribosomal protein L11. http://togogenome.org/gene/1193502:SHALO_RS12145 ^@ http://purl.uniprot.org/uniprot/A0A1D7TME8 ^@ Domain|||Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS5 family.|||Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.|||Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.|||The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.|||With S4 and S12 plays an important role in translational accuracy. http://togogenome.org/gene/1193502:SHALO_RS10125 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLC6 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/1193502:SHALO_RS02870 ^@ http://purl.uniprot.org/uniprot/A0A1D7THB0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane http://togogenome.org/gene/1193502:SHALO_RS06515 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJG7 ^@ Function|||Similarity ^@ Belongs to the HypA/HybF family.|||Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. http://togogenome.org/gene/1193502:SHALO_RS13815 ^@ http://purl.uniprot.org/uniprot/A0A1D7TND5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the KdpC family.|||Cell membrane|||Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.|||The system is composed of three essential subunits: KdpA, KdpB and KdpC. http://togogenome.org/gene/1193502:SHALO_RS05520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIM8 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the peptidase M17 family.|||Binds 2 manganese ions per subunit.|||Cytoplasm|||Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides. http://togogenome.org/gene/1193502:SHALO_RS13505 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN72 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SelA family.|||Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS13800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNC9 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/1193502:SHALO_RS12035 ^@ http://purl.uniprot.org/uniprot/A0A1D7TME9 ^@ Similarity ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/1193502:SHALO_RS03690 ^@ http://purl.uniprot.org/uniprot/A0A1D7THR7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the cytochrome ubiquinol oxidase subunit 1 family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG15 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS01465 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGG7 ^@ Function|||Similarity ^@ Belongs to the LpxC family.|||Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. http://togogenome.org/gene/1193502:SHALO_RS04050 ^@ http://purl.uniprot.org/uniprot/A0A1D7THY3 ^@ Function|||Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.|||Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L-serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate. http://togogenome.org/gene/1193502:SHALO_RS00990 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG46 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I subunit 2 family.|||Cell membrane|||Membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS05640 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIQ8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the bacterial ribosomal protein bS18 family.|||Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.|||Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6. http://togogenome.org/gene/1193502:SHALO_RS00645 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFY8 ^@ Similarity ^@ Belongs to the bacterial ribosomal protein bL35 family. http://togogenome.org/gene/1193502:SHALO_RS01270 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC7 ^@ Similarity ^@ Belongs to the HAD-like hydrolase superfamily. SerB family. http://togogenome.org/gene/1193502:SHALO_RS02360 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH33 ^@ Function|||Similarity ^@ Belongs to the aldehyde dehydrogenase family.|||In the C-terminal section; belongs to the aldehyde dehydrogenase family.|||In the N-terminal section; belongs to the proline dehydrogenase family.|||Oxidizes proline to glutamate for use as a carbon and nitrogen source. http://togogenome.org/gene/1193502:SHALO_RS01305 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGQ9 ^@ Function|||Subcellular Location Annotation ^@ Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS12800 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMU1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NiCoT transporter (TC 2.A.52) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS12365 ^@ http://purl.uniprot.org/uniprot/A0A1D7TML2 ^@ Function|||Similarity ^@ Belongs to the CheD family.|||Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis. http://togogenome.org/gene/1193502:SHALO_RS14070 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNH7 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS11070 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLU1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HisA/HisF family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS12135 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH1 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecY/SEC61-alpha family.|||Cell membrane|||Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.|||Membrane|||The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. http://togogenome.org/gene/1193502:SHALO_RS04620 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIC8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06760 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJB5 ^@ Caution|||Similarity|||Subcellular Location Annotation ^@ Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.|||Cell inner membrane|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS00930 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGC0 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the complex I 20 kDa subunit family.|||Binds 1 [4Fe-4S] cluster.|||Cell membrane|||NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.|||NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. http://togogenome.org/gene/1193502:SHALO_RS08025 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK44 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the PdxA family.|||Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).|||Cytoplasm|||Homodimer.|||The active site is located at the dimer interface. http://togogenome.org/gene/1193502:SHALO_RS00535 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFV9 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the HisA/HisF family.|||Cytoplasm|||Heterodimer of HisH and HisF.|||IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. http://togogenome.org/gene/1193502:SHALO_RS05370 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIK2 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SHMT family.|||Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS07080 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJI5 ^@ Cofactor|||Function|||Similarity ^@ Belongs to the transcriptional regulatory CopG/NikR family.|||Binds 1 nickel ion per subunit.|||Transcriptional regulator. http://togogenome.org/gene/1193502:SHALO_RS01485 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGM6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.|||Cytoplasm|||One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. http://togogenome.org/gene/1193502:SHALO_RS04235 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI17 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS00910 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG52 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the OmpP1/FadL family.|||Cell outer membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS14955 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP37 ^@ Similarity ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. http://togogenome.org/gene/1193502:SHALO_RS02425 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGW8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL10 family.|||Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.|||Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex. http://togogenome.org/gene/1193502:SHALO_RS14810 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNX4 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CDS family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01975 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGS1 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS10710 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLL6 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS09070 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKQ3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the HAK/KUP transporter (TC 2.A.72) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11375 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM10 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS07010 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJH4 ^@ Similarity ^@ Belongs to the UPF0045 family. http://togogenome.org/gene/1193502:SHALO_RS08905 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKM0 ^@ Similarity ^@ Belongs to the helicase family. UvrD subfamily. http://togogenome.org/gene/1193502:SHALO_RS03840 ^@ http://purl.uniprot.org/uniprot/A0A1D7THT1 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.|||Catalyzes the oxidation of L-aspartate to iminoaspartate.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS01145 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG90 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS10330 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLE9 ^@ Function ^@ Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. http://togogenome.org/gene/1193502:SHALO_RS01675 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGI4 ^@ Similarity ^@ Belongs to the LysR transcriptional regulatory family. http://togogenome.org/gene/1193502:SHALO_RS15090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP48 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the SecG family.|||Cell membrane|||Involved in protein export. Participates in an early event of protein translocation.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01370 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGE6 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the NDK family.|||Cytoplasm|||Homotetramer.|||Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. http://togogenome.org/gene/1193502:SHALO_RS06700 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJE9 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS01360 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGD6 ^@ Similarity ^@ Belongs to the methyl-accepting chemotaxis (MCP) protein family. http://togogenome.org/gene/1193502:SHALO_RS00605 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFZ6 ^@ Function|||Similarity ^@ Belongs to the bacterial ribosomal protein bS20 family.|||Binds directly to 16S ribosomal RNA. http://togogenome.org/gene/1193502:SHALO_RS10160 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLD1 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the dethiobiotin synthetase family.|||Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS00175 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFS0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the thioredoxin family. DsbA subfamily.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS08130 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK66 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS12770 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMU5 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the binding-protein-dependent transport system permease family.|||Cell membrane http://togogenome.org/gene/1193502:SHALO_RS05670 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIQ9 ^@ Caution|||Cofactor|||Function|||Similarity ^@ Belongs to the ketol-acid reductoisomerase family.|||Binds 2 magnesium ions per subunit.|||Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS06850 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJH7 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the FliS family.|||cytosol http://togogenome.org/gene/1193502:SHALO_RS10895 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM03 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.|||Cell outer membrane|||CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). http://togogenome.org/gene/1193502:SHALO_RS10055 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLB4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the SecD/SecF family. SecD subfamily.|||Cell membrane|||Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane|||Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. http://togogenome.org/gene/1193502:SHALO_RS00635 ^@ http://purl.uniprot.org/uniprot/A0A1D7TG02 ^@ Cofactor|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Binds 1 zinc ion per subunit.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS01515 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGH7 ^@ Subcellular Location Annotation ^@ Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS08490 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKC5 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.|||Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.|||Cytoplasm|||Monomer.|||The C-terminal coiled-coil domain is crucial for aminoacylation activity.|||ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site. http://togogenome.org/gene/1193502:SHALO_RS09260 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKU2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS04105 ^@ http://purl.uniprot.org/uniprot/A0A1D7THU0 ^@ Similarity ^@ Belongs to the CvfB family. http://togogenome.org/gene/1193502:SHALO_RS02900 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH60 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the triosephosphate isomerase family.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS02045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGY8 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the uroporphyrinogen decarboxylase family.|||Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.|||Cytoplasm|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS10955 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLR8 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS05035 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIH8 ^@ Subcellular Location Annotation ^@ Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS13050 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMZ2 ^@ Similarity ^@ Belongs to the class-II fumarase/aspartase family. Aspartase subfamily. http://togogenome.org/gene/1193502:SHALO_RS00435 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFT8 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the IlvD/Edd family.|||Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.|||Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS06085 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJD5 ^@ Similarity ^@ Belongs to the aldehyde dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS03115 ^@ http://purl.uniprot.org/uniprot/A0A1D7THA2 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS04840 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIN7 ^@ Similarity ^@ Belongs to the sigma-70 factor family. ECF subfamily. http://togogenome.org/gene/1193502:SHALO_RS03100 ^@ http://purl.uniprot.org/uniprot/A0A1D7THE8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the universal stress protein A family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS11215 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLX0 ^@ Similarity ^@ Belongs to the phosphohexose mutase family. http://togogenome.org/gene/1193502:SHALO_RS13235 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN20 ^@ Similarity ^@ Belongs to the sulfur carrier protein TusA family. http://togogenome.org/gene/1193502:SHALO_RS04310 ^@ http://purl.uniprot.org/uniprot/A0A1D7THX8 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).|||Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.|||Cytoplasm|||Homodimer. http://togogenome.org/gene/1193502:SHALO_RS12115 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMF7 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS13 family.|||Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.|||Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome. http://togogenome.org/gene/1193502:SHALO_RS10785 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLP5 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the type 2 tetrahydrodipicolinate N-succinyltransferase family.|||Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.|||Cytoplasm|||Homotrimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS11970 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMK9 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the CcoP / FixP family.|||Binds 2 heme C groups per subunit.|||C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.|||Cell inner membrane|||Component of the cbb3-type cytochrome c oxidase. http://togogenome.org/gene/1193502:SHALO_RS14750 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNW4 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliQ/MopD/SpaQ family.|||Cell membrane|||Membrane|||Role in flagellar biosynthesis. http://togogenome.org/gene/1193502:SHALO_RS15105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TP34 ^@ Caution|||Function|||Similarity|||Subunit ^@ Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.|||Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS11040 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLU8 ^@ Function|||Similarity|||Subunit ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.|||Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).|||Homotetramer. http://togogenome.org/gene/1193502:SHALO_RS11090 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLV9 ^@ Similarity ^@ Belongs to the polysaccharide synthase family. http://togogenome.org/gene/1193502:SHALO_RS07045 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJI6 ^@ Similarity ^@ Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. http://togogenome.org/gene/1193502:SHALO_RS08635 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKG1 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS15 family.|||Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.|||One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.|||Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA. http://togogenome.org/gene/1193502:SHALO_RS07340 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJQ8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the GSP F family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09775 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL59 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the AzlC family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS03295 ^@ http://purl.uniprot.org/uniprot/A0A1D7THI5 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the XseB family.|||Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.|||Cytoplasm|||Heterooligomer composed of large and small subunits. http://togogenome.org/gene/1193502:SHALO_RS09675 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL41 ^@ Similarity ^@ Belongs to the helicase family. RecQ subfamily. http://togogenome.org/gene/1193502:SHALO_RS03670 ^@ http://purl.uniprot.org/uniprot/A0A1D7THJ8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the CpxP/Spy family.|||Periplasm http://togogenome.org/gene/1193502:SHALO_RS05635 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIQ2 ^@ Function|||Induction|||Similarity|||Subcellular Location Annotation|||Subunit ^@ ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.|||Belongs to the peptidase S16 family.|||By heat shock.|||Cytoplasm|||Homohexamer. Organized in a ring with a central cavity. http://togogenome.org/gene/1193502:SHALO_RS06915 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJG3 ^@ Similarity ^@ Belongs to the 4-oxalocrotonate tautomerase family. http://togogenome.org/gene/1193502:SHALO_RS11820 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH7 ^@ Similarity ^@ Belongs to the acyl coenzyme A hydrolase family. http://togogenome.org/gene/1193502:SHALO_RS11615 ^@ http://purl.uniprot.org/uniprot/A0A1D7TME2 ^@ Similarity ^@ Belongs to the iron-containing alcohol dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS04455 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI49 ^@ Similarity ^@ Belongs to the class-I aminoacyl-tRNA synthetase family. http://togogenome.org/gene/1193502:SHALO_RS04465 ^@ http://purl.uniprot.org/uniprot/A0A1D7TI37 ^@ Similarity ^@ Belongs to the outer membrane porin (Opr) (TC 1.B.25) family. http://togogenome.org/gene/1193502:SHALO_RS09915 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL65 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS13790 ^@ http://purl.uniprot.org/uniprot/A0A1D7TND1 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane http://togogenome.org/gene/1193502:SHALO_RS09820 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL67 ^@ Caution|||Function|||PTM|||Similarity ^@ Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.|||Belongs to the ATP-dependent AMP-binding enzyme family.|||Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS13955 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNK2 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the NnrD/CARKD family.|||Belongs to the NnrE/AIBP family.|||Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.|||Binds 1 potassium ion per subunit.|||Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.|||Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.|||Homotetramer.|||In the C-terminal section; belongs to the NnrD/CARKD family.|||In the N-terminal section; belongs to the NnrE/AIBP family.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS12665 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMY3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the Fes family.|||Cytoplasm http://togogenome.org/gene/1193502:SHALO_RS13220 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN35 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the ExbD/TolR family.|||Cell inner membrane|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01940 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGQ6 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Bacterial flagellum basal body|||Belongs to the FliM family.|||Cell inner membrane|||FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS06960 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJG5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS10860 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLP7 ^@ Similarity ^@ Belongs to the bacterial solute-binding protein ModA family. http://togogenome.org/gene/1193502:SHALO_RS00510 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFY3 ^@ Similarity ^@ Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. http://togogenome.org/gene/1193502:SHALO_RS07865 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK31 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS00015 ^@ http://purl.uniprot.org/uniprot/A0A1D7TFP4 ^@ Function|||Miscellaneous|||Similarity|||Subcellular Location Annotation|||Subunit ^@ A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.|||Belongs to the type II topoisomerase GyrB family.|||Belongs to the type II topoisomerase family.|||Cytoplasm|||Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.|||Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis. http://togogenome.org/gene/1193502:SHALO_RS14425 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNQ4 ^@ Caution|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the ArsB family.|||Cell membrane|||Involved in arsenical resistance. Thought to form the channel of an arsenite pump.|||Lacks conserved residue(s) required for the propagation of feature annotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS06600 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJC3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the peptide transporter carbon starvation (CstA) (TC 2.A.114) family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09615 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL87 ^@ Similarity ^@ Belongs to the Nudix hydrolase family. http://togogenome.org/gene/1193502:SHALO_RS11735 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM87 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS08380 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKB7 ^@ Cofactor|||Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the HemJ family.|||Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.|||Catalyzes the oxidation of protoporphyrinogen IX to protoporphyrin IX.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS11155 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLW9 ^@ Similarity ^@ Belongs to the acetaldehyde dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS10985 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLU5 ^@ Function|||Similarity ^@ Belongs to the DMRL synthase family.|||Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. http://togogenome.org/gene/1193502:SHALO_RS01445 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGE5 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the type III secretion exporter family.|||Cell membrane|||Membrane|||Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin. http://togogenome.org/gene/1193502:SHALO_RS07860 ^@ http://purl.uniprot.org/uniprot/A0A1D7TK06 ^@ Function|||Similarity ^@ Belongs to the PEP-utilizing enzyme family.|||Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate. http://togogenome.org/gene/1193502:SHALO_RS13915 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNI1 ^@ Similarity ^@ Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. http://togogenome.org/gene/1193502:SHALO_RS14105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNK3 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the NiCoT transporter (TC 2.A.52) family.|||Cell membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS09895 ^@ http://purl.uniprot.org/uniprot/A0A1D7TL81 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.|||Cell inner membrane|||Homopentamer. In the absence of Mg(2+), interactions between subunits are weakened, and dimers, trimers and tetramers can be observed in vitro.|||Mediates influx of magnesium ions.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS07405 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJU5 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the argininosuccinate synthase family. Type 1 subfamily.|||Cytoplasm|||Homotetramer. http://togogenome.org/gene/1193502:SHALO_RS12185 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS17 family.|||One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.|||Part of the 30S ribosomal subunit. http://togogenome.org/gene/1193502:SHALO_RS03860 ^@ http://purl.uniprot.org/uniprot/A0A1D7THS2 ^@ Similarity ^@ Belongs to the GARS family. http://togogenome.org/gene/1193502:SHALO_RS02470 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH02 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the nlpA lipoprotein family.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS05245 ^@ http://purl.uniprot.org/uniprot/A0A1D7TIP5 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS08985 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKN4 ^@ Function|||Similarity ^@ Belongs to the RmuC family.|||Involved in DNA recombination. http://togogenome.org/gene/1193502:SHALO_RS02595 ^@ http://purl.uniprot.org/uniprot/A0A1D7TH27 ^@ Cofactor|||Similarity ^@ Belongs to the complex I 24 kDa subunit family.|||Binds 1 [2Fe-2S] cluster. http://togogenome.org/gene/1193502:SHALO_RS08680 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKG9 ^@ Function|||Similarity ^@ Belongs to the NAD-dependent DNA ligase family. LigA subfamily.|||DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. http://togogenome.org/gene/1193502:SHALO_RS14140 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNM1 ^@ Similarity ^@ Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. http://togogenome.org/gene/1193502:SHALO_RS01400 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGF3 ^@ Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the BamA family.|||Cell outer membrane|||Part of the Bam complex.|||Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. http://togogenome.org/gene/1193502:SHALO_RS01175 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGB1 ^@ Function|||Similarity|||Subunit ^@ ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.|||Belongs to the ClpX chaperone family.|||Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes. http://togogenome.org/gene/1193502:SHALO_RS09520 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKZ0 ^@ Function|||Similarity ^@ Belongs to the nucleoside phosphorylase PpnP family.|||Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. http://togogenome.org/gene/1193502:SHALO_RS01945 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGW9 ^@ Function|||Similarity|||Subcellular Location Annotation ^@ Belongs to the FliN/MopA/SpaO family.|||Cell inner membrane|||FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01695 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGK5 ^@ Similarity ^@ Belongs to the metallophosphoesterase superfamily. YfcE family. http://togogenome.org/gene/1193502:SHALO_RS11760 ^@ http://purl.uniprot.org/uniprot/A0A1D7TM86 ^@ Similarity ^@ Belongs to the PhoH family. http://togogenome.org/gene/1193502:SHALO_RS10290 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLE3 ^@ Similarity ^@ Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. http://togogenome.org/gene/1193502:SHALO_RS12200 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMI9 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uS3 family.|||Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.|||Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14. http://togogenome.org/gene/1193502:SHALO_RS03510 ^@ http://purl.uniprot.org/uniprot/A0A1D7THK1 ^@ Similarity ^@ Belongs to the glutamate synthase family. http://togogenome.org/gene/1193502:SHALO_RS14795 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNW8 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.|||Cell inner membrane|||Membrane http://togogenome.org/gene/1193502:SHALO_RS01555 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGW0 ^@ Similarity ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. http://togogenome.org/gene/1193502:SHALO_RS06020 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJ05 ^@ Function|||Similarity ^@ Belongs to the alpha-IPM synthase/homocitrate synthase family.|||This protein is a Fe-Mo-cofactor biosynthetic component. http://togogenome.org/gene/1193502:SHALO_RS12295 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMH5 ^@ Similarity ^@ Belongs to the FeoA family. http://togogenome.org/gene/1193502:SHALO_RS03360 ^@ http://purl.uniprot.org/uniprot/A0A1D7THG7 ^@ Similarity ^@ Belongs to the peptidase S41A family. http://togogenome.org/gene/1193502:SHALO_RS03480 ^@ http://purl.uniprot.org/uniprot/A0A1D7THL3 ^@ Similarity ^@ Belongs to the FKBP-type PPIase family. http://togogenome.org/gene/1193502:SHALO_RS03865 ^@ http://purl.uniprot.org/uniprot/A0A1D7THN7 ^@ Subcellular Location Annotation ^@ Membrane http://togogenome.org/gene/1193502:SHALO_RS06785 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJG6 ^@ Similarity ^@ Belongs to the nitroreductase family. http://togogenome.org/gene/1193502:SHALO_RS13210 ^@ http://purl.uniprot.org/uniprot/A0A1D7TN36 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB-dependent receptor family.|||Cell outer membrane http://togogenome.org/gene/1193502:SHALO_RS07105 ^@ http://purl.uniprot.org/uniprot/A0A1D7TJL9 ^@ Similarity ^@ Belongs to the HupF/HypC family. http://togogenome.org/gene/1193502:SHALO_RS12675 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMR0 ^@ Similarity|||Subcellular Location Annotation ^@ Belongs to the TonB family.|||Cell inner membrane http://togogenome.org/gene/1193502:SHALO_RS09500 ^@ http://purl.uniprot.org/uniprot/A0A1D7TKZ5 ^@ Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the class-II aminoacyl-tRNA synthetase family.|||Cytoplasm|||Tetramer of two alpha and two beta subunits. http://togogenome.org/gene/1193502:SHALO_RS09960 ^@ http://purl.uniprot.org/uniprot/A0A1D7TLF8 ^@ Domain|||Function|||Similarity|||Subcellular Location Annotation|||Subunit ^@ Belongs to the UvrB family.|||Cytoplasm|||Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.|||The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.|||The beta-hairpin motif is involved in DNA binding. http://togogenome.org/gene/1193502:SHALO_RS14715 ^@ http://purl.uniprot.org/uniprot/A0A1D7TNY2 ^@ Caution|||Cofactor|||Function|||Similarity|||Subunit ^@ Belongs to the radical SAM superfamily. Biotin synthase family.|||Binds 1 [2Fe-2S] cluster. The cluster is coordinated with 3 cysteines and 1 arginine.|||Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.|||Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.|||Homodimer.|||Lacks conserved residue(s) required for the propagation of feature annotation. http://togogenome.org/gene/1193502:SHALO_RS11940 ^@ http://purl.uniprot.org/uniprot/A0A1D7TMC0 ^@ Function|||Similarity|||Subunit ^@ Belongs to the universal ribosomal protein uL13 family.|||Part of the 50S ribosomal subunit.|||This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. http://togogenome.org/gene/1193502:SHALO_RS01575 ^@ http://purl.uniprot.org/uniprot/A0A1D7TGG4 ^@ Similarity ^@ Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.