Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data.
Rice Annotation Project Database (RAP-DB): an integrative and interactive database for rice genomics.
The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.
The genomes of Oryza sativa: a history of duplications.
Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species.
The genome sequence and structure of rice chromosome 1.
In-depth view of structure, activity, and evolution of rice chromosome 10.
Elicitor induced activation of the methylerythritol phosphate pathway toward phytoalexins biosynthesis in rice.
OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem.
Rice OsYSL15 is an iron-regulated iron(III)-deoxymugineic acid Transporter expressed in the roots and is essential for iron uptake in early growth of the seedlings.
Sequence and analysis of rice chromosome 4.
Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.
Genome-wide identification and expression analysis of rice cell cycle genes.
Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae.
Modulation of Rice Leaf Angle and Grain Size by Expressing OsBCL1 and OsBCL2 under the Control of OsBUL1 Promoter.
A genome-wide survey of HD-Zip genes in rice and analysis of drought-responsive family members.
Comparative genomic study of the thioredoxin family in photosynthetic organisms with emphasis on Populus trichocarpa.
A fine physical map of the rice chromosome 5.
Direct control of shoot meristem activity by a cytokinin-activating enzyme.
Functional analyses of LONELY GUY cytokinin-activating enzymes reveal the importance of the direct activation pathway in Arabidopsis.
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
Characterization of a novel rice bZIP protein which binds to the alpha-globulin promoter.
Expression of the REB transcriptional activator in rice grains improves the yield of recombinant proteins whose genes are controlled by a Reb-responsive promoter.
Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice.
DWARF3 participates in an SCF complex and associates with DWARF14 to suppress rice shoot branching.
Rice black streaked dwarf virus P7-2 forms a SCF complex through binding to Oryza sativa SKP1-like proteins, and interacts with GID2 involved in the gibberellin pathway.
Genome-wide identification of BURP domain-containing genes in rice reveals a gene family with diverse structures and responses to abiotic stresses.
A germin-like protein gene family functions as a complex quantitative trait locus conferring broad-spectrum disease resistance in rice.
A ribosomal protein L2 gene is transcribed, spliced, and edited at one site in rice mitochondria.
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants.
Identification of Dof proteins with implication in the gibberellin-regulated expression of a peptidase gene following the germination of rice grains.
Cellular localization and kinetics of the rice melatonin biosynthetic enzymes SNAT and ASMT.
Functional analyses of three ASMT gene family members in rice plants.
A plant locus essential for phylloquinone (vitamin K1) biosynthesis originated from a fusion of four eubacterial genes.
Phylogenetic and CRISPR/Cas9 studies in deciphering the evolutionary trajectory and phenotypic impacts of rice ERECTA genes.
The receptor-like cytoplasmic kinase (OsRLCK) gene family in rice: organization, phylogenetic relationship, and expression during development and stress.
AREB1, AREB2, and ABF3 are master transcription factors that cooperatively regulate ABRE-dependent ABA signaling involved in drought stress tolerance and require ABA for full activation.
Abscisic acid regulates gene expression in cortical fiber cells and silica cells of rice shoots.
Constitutive activation of transcription factor OsbZIP46 improves drought tolerance in rice.
Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts.
MODD mediates deactivation and degradation of OsbZIP46 to negatively regulate ABA signaling and drought resistance in rice.
Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes.
The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice.
A rice semi-dwarf gene, Tan-Ginbozu (D35), encodes the gibberellin biosynthesis enzyme, ent-kaurene oxidase.
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
CYP701A8: a rice ent-kaurene oxidase paralog diverted to more specialized diterpenoid metabolism.
The rice dwarf virus P2 protein interacts with ent-kaurene oxidases in vivo, leading to reduced biosynthesis of gibberellins and rice dwarf symptoms.
A comparison of rice chloroplast genomes.
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals.
Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with Arabidopsis.
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).
Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN family.
Nucleotide sequences of two genes encoding the light harvesting chlorophyll a/b binding protein of rice.
Down-regulation of four putative arabinoxylan feruloyl transferase genes from family PF02458 reduces ester-linked ferulate content in rice cell walls.
Overexpression of a BAHD acyltransferase, OsAt10, alters rice cell wall hydroxycinnamic acid content and saccharification.
Rice (Oryza sativa) contains a novel isoform of glutamate decarboxylase that lacks an authentic calmodulin-binding domain at the C-terminus.
Refunctionalization of the ancient rice blast disease resistance gene Pit by the recruitment of a retrotransposon as a promoter.
Alternative splicing of REGULATOR OF LEAF INCLINATION 1 modulates phosphate starvation signaling and plant growth.
An SPX-RLI1 module regulates leaf inclination in response to phosphate availability in rice.
Modulation of nitrate-induced phosphate response by the MYB transcription factor RLI1/HINGE1 in the nucleus.
Genome-wide analysis of cyclin family in rice (Oryza sativa L.).
ZEBRA-NECROSIS, a thylakoid-bound protein, is critical for the photoprotection of developing chloroplasts during early leaf development.
The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria.
The virescent-2 mutation inhibits translation of plastid transcripts for the plastid genetic system at an early stage of chloroplast differentiation.
14-3-3 proteins are part of an abscisic acid-VIVIPAROUS1 (VP1) response complex in the Em promoter and interact with VP1 and EmBP1.
Functions of OsBZR1 and 14-3-3 proteins in brassinosteroid signaling in rice.
Phosphorylation-mediated regulation of a rice ABA responsive element binding factor.
The rice 14-3-3 gene family and its involvement in responses to biotic and abiotic stress.
Functional isolation of novel nuclear proteins showing a variety of subnuclear localizations.
Overexpression of OsERF1, a novel rice ERF gene, up-regulates ethylene-responsive genes expression besides affects growth and development in Arabidopsis.
OsBZR1 turnover mediated by OsSK22-regulated U-box E3 ligase OsPUB24 in rice BR response.
Phylogenetic analyses identify 10 classes of the protein disulfide isomerase family in plants, including single-domain protein disulfide isomerase-related proteins.
The protein disulfide isomerase gene family in bread wheat (T. aestivum L.).
The class III peroxidase multigenic family in rice and its evolution in land plants.
BWMK1, a novel MAP kinase induced by fungal infection and mechanical wounding in rice.
BWMK1, a rice mitogen-activated protein kinase, locates in the nucleus and mediates pathogenesis-related gene expression by activation of a transcription factor.
Molecular analysis of the rice MAP kinase gene family in relation to Magnaporthe grisea infection.
Biosynthesis and secretion of mugineic acid family phytosiderophores in zinc-deficient barley.
Expression of iron-acquisition-related genes in iron-deficient rice is co-ordinately induced by partially conserved iron-deficiency-responsive elements.
Identification and localisation of the rice nicotianamine aminotransferase gene OsNAAT1 expression suggests the site of phytosiderophore synthesis in rice.
The expression of iron homeostasis-related genes during rice germination.
Functional redundancy of AtFtsH metalloproteases in thylakoid membrane complexes.
GRASSIUS: a platform for comparative regulatory genomics across the grasses.
Punctual transcriptional regulation by the rice circadian clock under fluctuating field conditions.
Erect leaves caused by brassinosteroid deficiency increase biomass production and grain yield in rice.
Involvement of C-22-hydroxylated brassinosteroids in auxin-induced lamina joint bending in rice.
Biochemical characterization of rice xylan O-acetyltransferases.
Two trichome birefringence-like proteins mediate xylan acetylation, which is essential for leaf blight resistance in rice.
Amino acid sequence of a probable amylase/protease inhibitor from rice seeds.
Rice non-specific lipid transfer protein: the 1.6-A crystal structure in the unliganded state reveals a small hydrophobic cavity.
Inventory and functional characterization of the HAK potassium transporters of rice.
Molecular evolution and functional divergence of HAK potassium transporter gene family in rice (Oryza sativa L.).
A higher plant has three different types of RPA heterotrimeric complex.
Functional divergence of duplicated genes results in a novel blast resistance gene Pi50 at the Pi2/9 locus.
The genomic dynamics and evolutionary mechanism of the Pi2/9 locus in rice.
Rice NON-YELLOW COLORING1 is involved in light-harvesting complex II and grana degradation during leaf senescence.
Two short-chain dehydrogenase/reductases, NON-YELLOW COLORING 1 and NYC1-LIKE, are required for chlorophyll b and light-harvesting complex II degradation during senescence in rice.
Characterization of Glossy1-homologous genes in rice involved in leaf wax accumulation and drought resistance.
A rice WRKY gene encodes a transcriptional repressor of the gibberellin signaling pathway in aleurone cells.
Development of an efficient method for the isolation of factors involved in gene transcription during rice embryo development.
Optimization of recombinant expression enables discovery of novel cytochrome P450 activity in rice diterpenoid biosynthesis.
Parsing a multifunctional biosynthetic gene cluster from rice: Biochemical characterization of CYP71Z6 & 7.
Putative cytochrome P450 genes in rice genome (Oryza sativa L. ssp. indica) and their EST evidence.
Amino acid sequences of ferredoxins from rice cultivars, japonica and indica.
Screening and cloning of antimicrobial DNA sequences using a vital staining method.
Nucleotide pyrophosphatase/phosphodiesterase 1 exerts a negative effect on starch accumulation and growth in rice seedlings under high temperature and CO2 concentration conditions.
Genome-wide identification, organization and phylogenetic analysis of dicer-like, argonaute and RNA-dependent RNA polymerase gene families and their expression analysis during reproductive development and stress in rice.
Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development.
The small interfering RNA production pathway is required for shoot meristem initiation in rice.
Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and negative regulator of resistance (NRR) proteins.
Function, intracellular localization and the importance in salt tolerance of a vacuolar Na(+)/H(+) antiporter from rice.
Molecular cloning and expression of the Na+/H+ exchanger gene in Oryza sativa.
Nomenclature for two-component signaling elements of rice.
Differential activation of the rice sucrose nonfermenting1-related protein kinase2 family by hyperosmotic stress and abscisic acid.
Further evidence of microcolinearity between barley and rice genomes at two orthologous regions.
Complete structures of three rice sucrose synthase isogenes and differential regulation of their expressions.
Differentially and developmentally regulated expression of three rice sucrose synthase genes.
Expression patterns of genes encoding carbohydrate-metabolizing enzymes and their relationship to grain filling in rice (Oryza sativa L.): comparison of caryopses located at different positions in a panicle.
Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane.
Characterization of all the subunits of replication factor C from a higher plant, rice (Oryza sativa L.), and their relation to development.
Characterization of a rice nuclear-encoded plastid RNA polymerase gene OsRpoTp.
Rice TATA binding protein interacts functionally with transcription factor IIB and the RF2a bZIP transcriptional activator in an enhanced plant in vitro transcription system.
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Comprehensive sequence and expression profile analysis of PEX11 gene family in rice.
Genome-wide identification of the rice calcium-dependent protein kinase and its closely related kinase gene families: comprehensive analysis of the CDPKs gene family in rice.
OIP30, a RuvB-like DNA helicase 2, is a potential substrate for the pollen-predominant OsCPK25/26 in rice.
Ef7 encodes an ELF3-like protein and promotes rice flowering by negatively regulating the floral repressor gene Ghd7 under both short- and long-day conditions.
Identification of a novel gene ef7 conferring an extremely long basic vegetative growth phase in rice.
Natural variation in Hd17, a homolog of Arabidopsis ELF3 that is involved in rice photoperiodic flowering.
OsELF3 is involved in circadian clock regulation for promoting flowering under long-day conditions in rice.
OsELF3-1, an ortholog of Arabidopsis early flowering 3, regulates rice circadian rhythm and photoperiodic flowering.
A secreted chitinase-like protein (OsCLP) supports root growth through calcium signaling in Oryza sativa.
Characterization of a newly identified rice chitinase-like protein (OsCLP) homologous to xylanase inhibitor.
The mitochondrial TIM22 preprotein translocase is highly conserved throughout the eukaryotic kingdom.
Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria.
Genomewide comparative phylogenetic and molecular evolutionary analysis of tubby-like protein family in Arabidopsis, rice, and poplar.
Identification of rice TUBBY-like genes and their evolution.
Composition and structure of the centromeric region of rice chromosome 8.
Formin homology 2 domains occur in multiple contexts in angiosperms.
Nuclear/nucleolar GTPase 2 proteins as a subfamily of YlqF/YawG GTPases function in pre-60S ribosomal subunit maturation of mono- and dicotyledonous plants.
RNA silencing of single and multiple members in a gene family of rice.
Expression of beta-expansins is correlated with internodal elongation in deepwater rice.
Group I allergens of grass pollen as cell wall-loosening agents.
Nomenclature for members of the expansin superfamily of genes and proteins.
Identification, characterization and interaction of HAP family genes in rice.
OsNF-YC2 and OsNF-YC4 proteins inhibit flowering under long-day conditions in rice.
Antagonistic HLH/bHLH transcription factors mediate brassinosteroid regulation of cell elongation and plant development in rice and Arabidopsis.
Rice leaf angle and grain size are affected by the OsBUL1 transcriptional activator complex.
The GA octodinucleotide repeat binding factor BBR participates in the transcriptional regulation of the homeobox gene Bkn3.
Characterization and expression of a rice RAD23 gene.
Circadian rhythmicity in the expression of a novel light-regulated rice gene.
LIGHT-INDUCED RICE1 regulates light-dependent attachment of LEAF-TYPE FERREDOXIN-NADP+ OXIDOREDUCTASE to the thylakoid membrane in rice and Arabidopsis.
Rice class III chitinase homologues isolated by random cloning of rice cDNAs.
Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.
Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice.
A null mutation of ROS1a for DNA demethylation in rice is not transmittable to progeny.
Mutations in the DNA demethylase OsROS1 result in a thickened aleurone and improved nutritional value in rice grains.
A PIN1 family gene, OsPIN1, involved in auxin-dependent adventitious root emergence and tillering in rice.
Expression of PIN genes in rice (Oryza sativa L.): tissue specificity and regulation by hormones.
The rice mitochondrial genomes and their variations.
Identification of 33 rice aquaporin genes and analysis of their expression and function.
The role of aquaporin RWC3 in drought avoidance in rice.
A multiprotein complex regulates interference-sensitive crossover formation in rice.
OsSHOC1 and OsPTD1 are essential for crossover formation during rice meiosis.
A novel trimeric complex in plant cells that contributes to the lamina inclination of rice.
Induction of a novel XIP-type xylanase inhibitor by external ascorbic acid treatment and differential expression of XIP-family genes in rice.
Purification and characterization of a XIP-type endoxylanase inhibitor from rice (Oryza sativa).
DWARF10, an RMS1/MAX4/DAD1 ortholog, controls lateral bud outgrowth in rice.
FINE CULM1 (FC1) works downstream of strigolactones to inhibit the outgrowth of axillary buds in rice.
Molecular evolution of the teosinte branched gene among maize and related grasses.
The OsTB1 gene negatively regulates lateral branching in rice.
The interaction between OsMADS57 and OsTB1 modulates rice tillering via DWARF14.
Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis.
OsACA6, a P-type IIB Ca(2+) ATPase promotes salinity and drought stress tolerance in tobacco by ROS scavenging and enhancing the expression of stress-responsive genes.
Salinity and drought tolerant OsACA6 enhances cold tolerance in transgenic tobacco by interacting with stress-inducible proteins.
Jumonji C domain protein JMJ705-mediated removal of histone H3 lysine 27 trimethylation is involved in defense-related gene activation in rice.
Comparative study of SBP-box gene family in Arabidopsis and rice.
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
Identification of rice (Oryza sativa) proteins linked to the cyclin-mediated regulation of the cell cycle.
A novel NAC transcription factor, IDEF2, that recognizes the iron deficiency-responsive element 2 regulates the genes involved in iron homeostasis in plants.
Sequencing and characterization of telomere and subtelomere regions on rice chromosomes 1S, 2S, 2L, 6L, 7S, 7L and 8S.
ALOG domains: provenance of plant homeotic and developmental regulators from the DNA-binding domain of a novel class of DIRS1-type retroposons.
The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet.
Genome-wide identification and analyses of the rice calmodulin and related potential calcium sensor proteins.
An ancient P-loop GTPase in rice is regulated by a higher plant-specific regulatory protein.
Constitutive expression of a rice GTPase-activating protein induces defense responses.
Expression of a RING-HC protein from rice improves resistance to Pseudomonas syringae pv. tomato DC3000 in transgenic Arabidopsis thaliana.
Site-directed mutagenesis shows the significance of interactions with phospholipids and the G-protein OsYchF1 for the physiological functions of the rice GTPase-activating protein 1 (OsGAP1).
The unconventional P-loop NTPase OsYchF1 and its regulator OsGAP1 play opposite roles in salinity stress tolerance.
Analysis of five rice 4-coumarate:coenzyme A ligase enzyme activity and stress response for potential roles in lignin and flavonoid biosynthesis in rice.
Functional characterization of evolutionarily divergent 4-coumarate:coenzyme a ligases in rice.
Genome-wide analysis of a land plant-specific acyl:coenzyme A synthetase (ACS) gene family in Arabidopsis, poplar, rice and Physcomitrella.
Analysis of sialyltransferase-like proteins from Oryza sativa.
Proteomic survey of metabolic pathways in rice.
Rice APOPTOSIS INHIBITOR5 coupled with two DEAD-box adenosine 5'-triphosphate-dependent RNA helicases regulates tapetum degeneration.
ABA controls H(2)O(2) accumulation through the induction of OsCATB in rice leaves under water stress.
Association-dissociation of glycolate oxidase with catalase in rice: a potential switch to modulate intracellular H2O2 levels.
Cloning and characterization of catalases from rice, Oryza sativa L.
Cloning and characterization of the rice CatA catalase gene, a homologue of the maize Cat3 gene.
Involvement of CAT in the detoxification of HT-induced ROS burst in rice anther and its relation to pollen fertility.
Nitric oxide ameliorates zinc oxide nanoparticles-induced phytotoxicity in rice seedlings.
Nitric oxide and protein S-nitrosylation are integral to hydrogen peroxide-induced leaf cell death in rice.
OsMYB45 plays an important role in rice resistance to cadmium stress.
The receptor-like cytoplasmic kinase STRK1 phosphorylates and activates CatC, thereby regulating H2O2 homeostasis and improving salt tolerance in rice.
The rice thylakoid membrane-bound ascorbate peroxidase OsAPX8 functions in tolerance to bacterial blight.
Whole genome analysis of the OsGRF gene family encoding plant-specific putative transcription activators in rice (Oryza sativa L.).
Molecular cloning and differential expression of an gamma-aminobutyrate transaminase gene, OsGABA-T, in rice (Oryza sativa) leaves infected with blast fungus.
Cell wall invertase in developing rice caryopsis: molecular cloning of OsCIN1 and analysis of its expression in relation to its role in grain filling.
Molecular cloning and expression analysis of the cell-wall invertase gene family in rice (Oryza sativa L.).
A gibberellin-regulated calcineurin B in rice localizes to the tonoplast and is implicated in vacuole function.
Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks.
Expression analysis of the calcineurin B-like gene family in rice (Oryza sativa L.) under environmental stresses.
Isolation and characterization of rice MADS box gene homologues and their RFLP mapping.
OsMADS22, an STMADS11-like MADS-box gene of rice, is expressed in non-vegetative tissues and its ectopic expression induces spikelet meristem indeterminacy.
Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses.
OsSpo11-4, a rice homologue of the archaeal TopVIA protein, mediates double-strand DNA cleavage and interacts with OsTopVIB.
Cation dependent O-methyltransferases from rice.
Expression, imprinting, and evolution of rice homologs of the polycomb group genes.
Polycomb group gene OsFIE2 regulates rice (Oryza sativa) seed development and grain filling via a mechanism distinct from Arabidopsis.
Molecular and functional analyses of COPT/Ctr-type copper transporter-like gene family in rice.
Down-regulation of OsSAG12-1 results in enhanced senescence and pathogen-induced cell death in transgenic rice plants.
Hormonal regulation of expression of two cysteine endopeptidase genes in rice seedlings.
Identification and characterization of a rice cysteine endopeptidase that digests glutelin.
Multiple mode regulation of a cysteine proteinase gene expression in rice.
The structure and organization of two cysteine endopeptidase genes from rice.
Functional relevance of J-protein family of rice (Oryza sativa).
Interaction between proliferating cell nuclear antigen (PCNA) and a DnaJ induced by DNA damage.
The DnaJ OsDjA7/8 is essential for chloroplast development in rice (Oryza sativa).
Evolutionary trajectory of phytoalexin biosynthetic gene clusters in rice.
Antiquity and function of CASTOR and POLLUX, the twin ion channel-encoding genes key to the evolution of root symbioses in plants.
Divergence of evolutionary ways among common sym genes: CASTOR and CCaMK show functional conservation between two symbiosis systems and constitute the root of a common signaling pathway.
A new AOX homologous gene OsIM1 from rice (Oryza sativa L.) with an alternative splicing mechanism under salt stress.
Rice phosphate transporters include an evolutionarily divergent gene specifically activated in arbuscular mycorrhizal symbiosis.
Transcriptional Activation of Secondary Wall Biosynthesis by Rice and Maize NAC and MYB Transcription Factors.
Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa).
Identification and characterization of cytokinin-signalling gene families in rice.
Crystal structures of two phytohormone signal-transducing alpha/beta hydrolases: karrikin-signaling KAI2 and strigolactone-signaling DWARF14.
D14-SCF(D3)-dependent degradation of D53 regulates strigolactone signalling.
DWARF 53 acts as a repressor of strigolactone signalling in rice.
Destabilization of strigolactone receptor DWARF14 by binding of ligand and E3-ligase signaling effector DWARF3.
Dwarf 88, a novel putative esterase gene affecting architecture of rice plant.
Identification and characterization of HTD2: a novel gene negatively regulating tiller bud outgrowth in rice.
Molecular mechanism of strigolactone perception by DWARF14.
Strigolactone signalling: standing on the shoulders of DWARFs.
Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling.
Structural requirements of strigolactones for shoot branching inhibition in rice and Arabidopsis.
Structures of D14 and D14L in the strigolactone and karrikin signaling pathways.
Suppression of tiller bud activity in tillering dwarf mutants of rice.
The computational-based structure of Dwarf14 provides evidence for its role as potential strigolactone receptor in plants.
d14, a strigolactone-insensitive mutant of rice, shows an accelerated outgrowth of tillers.
OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice.
Cloning and sequence analysis of the genomic DNA fragment encoding oryzacystatin.
Comparative phylogenetic analysis of cystatin gene families from arabidopsis, rice and barley.
Engineered oryzacystatin-I expressed in transgenic hairy roots confers resistance to Globodera pallida.
High level expression of oryzacystatin in Escherichia coli.
Identification of a signal peptide for oryzacystatin-I.
Molecular cloning of a cysteine proteinase inhibitor of rice (oryzacystatin). Homology with animal cystatins and transient expression in the ripening process of rice seeds.
Rice cystatin: bacterial expression, purification, cysteine proteinase inhibitory activity, and insect growth suppressing activity of a truncated form of the protein.
Three-dimensional solution structure of oryzacystatin-I, a cysteine proteinase inhibitor of the rice, Oryza sativa L. japonica.
Two distinct cystatin species in rice seeds with different specificities against cysteine proteinases. Molecular cloning, expression, and biochemical studies on oryzacystatin-II.
Characterization of stress-responsive CIPK genes in rice for stress tolerance improvement.
Functional identification of a trehalose 6-phosphate phosphatase gene that is involved in transient induction of trehalose biosynthesis during chilling stress in rice.
The role of tocopherol cyclase in salt stress tolerance of rice (Oryza sativa).
Classification, expression pattern, and E3 ligase activity assay of rice U-box-containing proteins.
Two LysM receptor molecules, CEBiP and OsCERK1, cooperatively regulate chitin elicitor signaling in rice.
A rice brassinosteroid-deficient mutant, ebisu dwarf (d2), is caused by a loss of function of a new member of cytochrome P450.
Position dependent expression of GL2-type homeobox gene, Roc1: significance for protoderm differentiation and radial pattern formation in early rice embryogenesis.
Aberrant spikelet and panicle1, encoding a TOPLESS-related transcriptional co-repressor, is involved in the regulation of meristem fate in rice.
MONOCULM 3, an ortholog of WUSCHEL in rice, is required for tiller bud formation.
MORE FLORET 1 encodes a MYB transcription factor that regulates spikelet development in rice.
OsLIS-L1 encoding a lissencephaly type-1-like protein with WD40 repeats is required for plant height and male gametophyte formation in rice.
Structural basis for recognition of diverse transcriptional repressors by the TOPLESS family of corepressors.
Evaluating the microtubule cytoskeleton and its interacting proteins in monocots by mining the rice genome.
MucoRice-cholera toxin B-subunit, a rice-based oral cholera vaccine, down-regulates the expression of alpha-amylase/trypsin inhibitor-like protein family as major rice allergens.
Rice proteome database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003.
Structure and some characterization of the gene for phenylalanine ammonia-lyase from rice plants.
GIBBERELLIN INSENSITIVE DWARF1 encodes a soluble receptor for gibberellin.
Structural basis for gibberellin recognition by its receptor GID1.
Five phylogenetically close rice SWEET genes confer TAL effector-mediated susceptibility to Xanthomonas oryzae pv. oryzae.
SWEETs, transporters for intracellular and intercellular sugar translocation.
Sugar transporters for intercellular exchange and nutrition of pathogens.
Chloroplast genome sequences from total DNA for plant identification.
Cloning, characterization and prokaryotic expression of cytosolic malate dehydrogenase from Oryza sativa.
Identification of phosphoproteins regulated by gibberellin in rice leaf sheath.
A novel class of gibberellin 2-oxidases control semidwarfism, tillering, and root development in rice.
Expression of novel rice gibberellin 2-oxidase gene is under homeostatic regulation by biologically active gibberellins.
Differential accumulation of the new high-affinity phosphate transporter candidated gene fragment in rice roots in response to phosphorus deficiency stress.
Increased expression of OsPT1, a high-affinity phosphate transporter, enhances phosphate acquisition in rice.
A network of rice genes associated with stress response and seed development.
An efflux transporter of silicon in rice.
Genotypic difference in silicon uptake and expression of silicon transporter genes in rice.
Orchestration of three transporters and distinct vascular structures in node for intervascular transfer of silicon in rice.
Transporters of arsenite in rice and their role in arsenic accumulation in rice grain.
Chlorophyll b and phycobilins in the common ancestor of cyanobacteria and chloroplasts.
Characterization and transcriptional expression of the alpha-expansin gene family in rice.
Expression of alpha-expansin and expansin-like genes in deepwater rice.
A simple and rapid nucleotide sequencing strategy and its application in analyzing a rice histone 3 gene.
The nucleotide sequences of two rice histone H3 genes.
Systematic reverse genetic screening of T-DNA tagged genes in rice for functional genomic analyses: MADS-box genes as a test case.
Functional characterization of rice CW-domain containing zinc finger proteins involved in histone recognition.
Molecular structure of ras-related small GTP-binding protein genes of rice plants and GTPase activities of gene products in Escherichia coli.
Molecular characterization, expression pattern, and functional analysis of the OsIRL gene family encoding intracellular Ras-group-related LRR proteins in rice.
Classification of rice allergenic protein cDNAs belonging to the alpha-amylase/trypsin inhibitor gene family.
Gene structure and expression of rice seed allergenic proteins belonging to the alpha-amylase/trypsin inhibitor family.
Identification of rice proteins recognized by the IgE antibodies of patients with food allergies.
A rice transient assay system identifies a novel domain in NRR required for interaction with NH1/OsNPR1 and inhibition of NH1-mediated transcriptional activation.
Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers.
Characterization of the phosphofructokinase gene family in rice and its expression under oxygen deficiency stress.
Identification of the 19S regulatory particle subunits from the rice 26S proteasome.
Characterization of genes involved in cytokinin signaling and metabolism from rice.
Overexpression of a type-A response regulator alters rice morphology and cytokinin metabolism.
The two-component signal system in rice (Oryza sativa L.): a genome-wide study of cytokinin signal perception and transduction.
Identification of grass-specific enzyme that acylates monolignols with p-coumarate.
Analysis of PHOTOPERIOD SENSITIVITY5 sheds light on the role of phytochromes in photoperiodic flowering in rice.
Phytochromes confer the photoperiodic control of flowering in rice (a short-day plant).
A mutation of OSOTP 51 leads to impairment of photosystem I complex assembly and serious photo-damage in rice.
Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
Molecular cloning, expression and subcellular localization of a BiP homolog from rice endosperm tissue.
Overexpression of BiP has inhibitory effects on the accumulation of seed storage proteins in endosperm cells of rice.
Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.).
Purification and characterization of phospholipase D (PLD) from rice (Oryza sativa L.) and cloning of cDNA for PLD from rice and maize (Zea mays L.).
Structure, expression, and functional analysis of the hexokinase gene family in rice (Oryza sativa L.).
A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes.
A genetic screen identifies a requirement for cysteine-rich-receptor-like kinases in rice NH1 (OsNPR1)-mediated immunity.
Rice NTRC is a high-efficiency redox system for chloroplast protection against oxidative damage.
Sequencing of a rice centromere uncovers active genes.
Genome sequencing of a 239-kb region of rice chromosome 10L reveals a high frequency of gene duplication and a large chloroplast DNA insertion.
Organisation and structural evolution of the rice glutathione S-transferase gene family.
AtDUR3 encodes a new type of high-affinity urea/H+ symporter in Arabidopsis.
Rice DUR3 mediates high-affinity urea transport and plays an effective role in improvement of urea acquisition and utilization when expressed in Arabidopsis.
Expression analyses of beta-tubulin isotype genes in rice.
Proteomic analysis of rice leaf, stem and root tissues during growth course.
Three rice cDNA clones encoding different beta-tubulin isotypes.
cDNA sequences of three kinds of beta-tubulins from rice.
Identification and expression analysis of OsLPR family revealed the potential roles of OsLPR3 and 5 in maintaining phosphate homeostasis in rice.
The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice.
Rice xa13 recessive resistance to bacterial blight is defeated by induction of the disease susceptibility gene Os-11N3. The bacterial pathogen Xanthomonas oryzae overcomes rice defenses by regulating host copper redistribution.
Rice sHsp genes: genomic organization and expression profiling under stress and development.
Ectopic expression of KNOTTED1-like homeobox protein induces expression of cytokinin biosynthesis genes in rice.
Interaction of rice and human SRP19 polypeptides with signal recognition particle RNA.
Identification and characterization of two new members of the GRAS gene family in rice responsive to N-acetylchitooligosaccharide elicitor.
bZIP transcription factor OsbZIP52/RISBZ5: a potential negative regulator of cold and drought stress response in rice.
A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice.
Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8'-hydroxylase in rice.
Reduced ABA accumulation in the root system is caused by ABA exudation in upland rice (Oryza sativa L. var. Gaoshan1) and this enhanced drought adaptation.
B-GATA transcription factors - insights into their structure, regulation, and role in plant development.
Rice cytokinin GATA transcription Factor1 regulates chloroplast development and plant architecture.
A homolog of human ski-interacting protein in rice positively regulates cell viability and stress tolerance.
FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm.
Phylogenetic analysis of the plant-specific zinc finger-homeobox and mini zinc finger gene families.
The rice flattened shoot meristem, encoding CAF-1 p150 subunit, is required for meristem maintenance by regulating the cell-cycle period.