572477:ALVIN RS04085
gene id: 572477:ALVIN_RS04085
uniprot id: D3RQG5
names: Similarity
messages: Belongs to the transcriptional regulatory Fis family.

572477:ALVIN RS01835
gene id: 572477:ALVIN_RS01835
uniprot id: D3RN45
names: Similarity
messages: Belongs to the UPF0234 family.

572477:ALVIN RS07670
gene id: 572477:ALVIN_RS07670
uniprot id: D3RTH4
names: Similarity
messages: Belongs to the peptidase S49 family.

572477:ALVIN RS13960
gene id: 572477:ALVIN_RS13960
uniprot id: D3RQM2
names: Similarity
messages: Belongs to the HypD family.

572477:ALVIN RS06055
gene id: 572477:ALVIN_RS06055
uniprot id: D3RSK6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the band 7/mec-2 family. HflK subfamily.
messages: HflC and HflK could encode or regulate a protease.
messages: HflC and HflK may interact to form a multimeric complex.
messages: Membrane

572477:ALVIN RS01485
gene id: 572477:ALVIN_RS01485
uniprot id: D3RMK1
names: Function
names: Similarity
messages: Belongs to the uroporphyrinogen-III synthase family.
messages: Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.

572477:ALVIN RS07245
gene id: 572477:ALVIN_RS07245
uniprot id: D3RT92
names: Similarity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.

572477:ALVIN RS13645
gene id: 572477:ALVIN_RS13645
uniprot id: D3RQ31
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NhaD Na(+)/H(+) (TC 2.A.62) antiporter family.
messages: Membrane

572477:ALVIN RS13210
gene id: 572477:ALVIN_RS13210
uniprot id: D3RPU4
names: Similarity
messages: Belongs to the geranylgeranyl reductase family. ChlP subfamily.

572477:ALVIN RS00080
gene id: 572477:ALVIN_RS00080
uniprot id: D3RUT8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Membrane

572477:ALVIN RS14330
gene id: 572477:ALVIN_RS14330
uniprot id: D3RQU6
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS14700
gene id: 572477:ALVIN_RS14700
uniprot id: D3RRD7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MotA family.
messages: Membrane

572477:ALVIN RS00680
gene id: 572477:ALVIN_RS00680
uniprot id: D3RVH7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurB family.
messages: Cell wall formation.
messages: Cytoplasm

572477:ALVIN RS05800
gene id: 572477:ALVIN_RS05800
uniprot id: D3RSF3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS06840
gene id: 572477:ALVIN_RS06840
uniprot id: D3RT12
names: Function
names: Induction
names: Similarity
messages: Acts as a chaperone.
messages: Belongs to the heat shock protein 70 family.
messages: By stress conditions e.g. heat shock.

572477:ALVIN RS14125
gene id: 572477:ALVIN_RS14125
uniprot id: D3RQQ5
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
messages: Homodimer.

572477:ALVIN RS04175
gene id: 572477:ALVIN_RS04175
uniprot id: D3RQI4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Cell inner membrane
messages: Homoheptamer.
messages: Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.
messages: Membrane

572477:ALVIN RS01250
gene id: 572477:ALVIN_RS01250
uniprot id: D3RMF5
names: Function
names: Similarity
messages: Belongs to the PINc/VapC protein family.
messages: Toxic component of a toxin-antitoxin (TA) system. An RNase.

572477:ALVIN RS05490
gene id: 572477:ALVIN_RS05490
uniprot id: D3RRZ2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS13505
gene id: 572477:ALVIN_RS13505
uniprot id: D3RQ03
names: Similarity
messages: Belongs to the hemerythrin family.

572477:ALVIN RS08035
gene id: 572477:ALVIN_RS08035
uniprot id: D3RTP5
names: Domain
names: Function
names: Similarity
messages: Belongs to the vitamin-B12 dependent methionine synthase family.
messages: Catalyzes the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
messages: Modular enzyme with four functionally distinct domains. The isolated Hcy-binding domain catalyzes methyl transfer from free methylcobalamin to homocysteine. The Hcy-binding domain in association with the pterin-binding domain catalyzes the methylation of cob(I)alamin by methyltetrahydrofolate and the methylation of homocysteine. The B12-binding domain binds the cofactor. The AdoMet activation domain binds S-adenosyl-L-methionine. Under aerobic conditions cob(I)alamin can be converted to inactive cob(II)alamin. Reductive methylation by S-adenosyl-L-methionine and flavodoxin regenerates methylcobalamin.

572477:ALVIN RS04705
gene id: 572477:ALVIN_RS04705
uniprot id: D3RR64
names: Function
names: Similarity
names: Subunit
messages: Belongs to the acetolactate synthase small subunit family.
messages: Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.
messages: Dimer of large and small chains.

572477:ALVIN RS10325
gene id: 572477:ALVIN_RS10325
uniprot id: D3RV61
names: Similarity
messages: Belongs to the DprA/Smf family.

572477:ALVIN RS01410
gene id: 572477:ALVIN_RS01410
uniprot id: D3RMI6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the QueA family.
messages: Cytoplasm
messages: Monomer.
messages: Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).

572477:ALVIN RS03305
gene id: 572477:ALVIN_RS03305
uniprot id: D3RPN3
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

572477:ALVIN RS04400
gene id: 572477:ALVIN_RS04400
uniprot id: D3RR06
names: Similarity
messages: Belongs to the ModE family.

572477:ALVIN RS13735
gene id: 572477:ALVIN_RS13735
uniprot id: P22859
names: Caution
names: Cofactor
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the RuBisCO large chain family. Type I subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterohexadecamer of 8 large chains and 8 small chains; disulfide-linked. The disulfide link is formed within the large subunit homodimers.
messages: In C.vinosum two similar set of genes code for RuBisCO large and small chains: the RbcL-RbcS (this entry) and the RbcA-RbcB pair. Under standard photoautotrophic culture conditions only the latter pair seems active, the former probably being cryptic.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: The disulfide bond which can form in the large chain dimeric partners within the hexadecamer appears to be associated with oxidative stress and protein turnover.

572477:ALVIN RS04870
gene id: 572477:ALVIN_RS04870
uniprot id: D3RRM0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-3 family.
messages: Cytoplasm
messages: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
messages: Monomer.

572477:ALVIN RS11040
gene id: 572477:ALVIN_RS11040
uniprot id: D3RVX1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RdgC family.
messages: May be involved in recombination.
messages: nucleoid

572477:ALVIN RS00805
gene id: 572477:ALVIN_RS00805
uniprot id: D3RVK2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CoaE family.
messages: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
messages: Cytoplasm

572477:ALVIN RS05610
gene id: 572477:ALVIN_RS05610
uniprot id: D3RSB4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

572477:ALVIN RS14455
gene id: 572477:ALVIN_RS14455
uniprot id: D3RQW9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase PH family.
messages: Homohexameric ring arranged as a trimer of dimers.
messages: Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.

572477:ALVIN RS14095
gene id: 572477:ALVIN_RS14095
uniprot id: D3RQP9
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS10790
gene id: 572477:ALVIN_RS10790
uniprot id: D3RVS4
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS00295
gene id: 572477:ALVIN_RS00295
uniprot id: D3RUY2
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS09960
gene id: 572477:ALVIN_RS09960
uniprot id: D3RUS0
names: Similarity
messages: Belongs to the PhoH family.

572477:ALVIN RS12715
gene id: 572477:ALVIN_RS12715
uniprot id: D3RP70
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS12050
gene id: 572477:ALVIN_RS12050
uniprot id: D3RNG1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DapA family.
messages: Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.
messages: Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB.

572477:ALVIN RS08695
gene id: 572477:ALVIN_RS08695
uniprot id: D3RU25
names: Similarity
messages: Belongs to the radical SAM superfamily. KamA family.

572477:ALVIN RS05415
gene id: 572477:ALVIN_RS05415
uniprot id: Q06529
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Binds 2 heme c groups covalently per subunit.
messages: Diheme cytochrome that function as the electron transport subunit of sulfide dehydrogenase.
messages: Dimer of one cytochrome and one flavoprotein.
messages: Periplasm

572477:ALVIN RS05065
gene id: 572477:ALVIN_RS05065
uniprot id: D3RRQ6
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

572477:ALVIN RS07035
gene id: 572477:ALVIN_RS07035
uniprot id: D3RT51
names: Function
names: Similarity
names: Subunit
messages: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
messages: Belongs to the ClpX chaperone family.
messages: Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

572477:ALVIN RS11095
gene id: 572477:ALVIN_RS11095
uniprot id: D3RVY3
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family.

572477:ALVIN RS05660
gene id: 572477:ALVIN_RS05660
uniprot id: D3RSC4
names: Similarity
messages: Belongs to the UPF0337 (CsbD) family.

572477:ALVIN RS08550
gene id: 572477:ALVIN_RS08550
uniprot id: D3RTZ9
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

572477:ALVIN RS15210
gene id: 572477:ALVIN_RS15210
uniprot id: D3RS12
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anaerobic coproporphyrinogen-III oxidase family. HemW subfamily.
messages: Cytoplasm
messages: Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.

572477:ALVIN RS10210
gene id: 572477:ALVIN_RS10210
uniprot id: D3RV40
names: Caution
names: Function
names: Similarity
messages: Belongs to the DXR family.
messages: Catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS00830
gene id: 572477:ALVIN_RS00830
uniprot id: D3RVK7
names: Function
names: PTM
names: Similarity
messages: Acetylated. Deacetylation by the SIR2-homolog deacetylase activates the enzyme.
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.

572477:ALVIN RS03120
gene id: 572477:ALVIN_RS03120
uniprot id: D3RPJ6
names: Similarity
messages: Belongs to the isochorismate synthase family.

572477:ALVIN RS12790
gene id: 572477:ALVIN_RS12790
uniprot id: D3RP86
names: Similarity
messages: Belongs to the carotenoid/retinoid oxidoreductase family.

572477:ALVIN RS01480
gene id: 572477:ALVIN_RS01480
uniprot id: D3RMK0
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the HMBS family.
messages: Binds 1 dipyrromethane group covalently.
messages: Monomer.
messages: Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
messages: The porphobilinogen subunits are added to the dipyrromethane group.

572477:ALVIN RS01795
gene id: 572477:ALVIN_RS01795
uniprot id: D3RN38
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

572477:ALVIN RS00355
gene id: 572477:ALVIN_RS00355
uniprot id: D3RUZ4
names: Similarity
messages: Belongs to the GST superfamily. HSP26 family.

572477:ALVIN RS15965
gene id: 572477:ALVIN_RS15965
uniprot id: D3RW92
names: Function
names: Subunit
messages: Homotetramer.
messages: Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.

572477:ALVIN RS10780
gene id: 572477:ALVIN_RS10780
uniprot id: D3RVS2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

572477:ALVIN RS05600
gene id: 572477:ALVIN_RS05600
uniprot id: D3RSB2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
messages: Homodimer.

572477:ALVIN RS08650
gene id: 572477:ALVIN_RS08650
uniprot id: D3RU17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OmpP1/FadL family.
messages: Cell outer membrane
messages: Membrane

572477:ALVIN RS01780
gene id: 572477:ALVIN_RS01780
uniprot id: O52179
names: Function
names: Similarity
names: Subunit
messages: Structural protein of the sulfur globules, which are intracellular globules that serve for sulfur storage in purple sulfur bacteria.
messages: The protein envelope of the sulfur globules is composed of the three different proteins CV1, CV2 and CV3.
messages: To C.vinosum CV1 and T.roseopersicina TR0.

572477:ALVIN RS11315
gene id: 572477:ALVIN_RS11315
uniprot id: D3RMQ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.
messages: Cytoplasm
messages: Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.

572477:ALVIN RS04235
gene id: 572477:ALVIN_RS04235
uniprot id: D3RQX3
names: Similarity
messages: Belongs to the RecJ family.

572477:ALVIN RS13625
gene id: 572477:ALVIN_RS13625
uniprot id: D3RQ27
names: Caution
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
messages: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS00770
gene id: 572477:ALVIN_RS00770
uniprot id: D3RVJ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TACO1 family.
messages: Cytoplasm

572477:ALVIN RS12115
gene id: 572477:ALVIN_RS12115
uniprot id: D3RNH4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS08090
gene id: 572477:ALVIN_RS08090
uniprot id: D3RTQ6
names: Similarity
messages: Belongs to the WrbA family.

572477:ALVIN RS04890
gene id: 572477:ALVIN_RS04890
uniprot id: D3RRM4
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Tetramer of two alpha and two beta subunits.

572477:ALVIN RS03800
gene id: 572477:ALVIN_RS03800
uniprot id: D3RQA8
names: Function
names: Similarity
messages: Belongs to the GTP cyclohydrolase IV family.
messages: Converts GTP to 7,8-dihydroneopterin triphosphate.

572477:ALVIN RS03110
gene id: 572477:ALVIN_RS03110
uniprot id: D3RPJ4
names: Function
names: Similarity
messages: Belongs to the PINc/VapC protein family.
messages: Toxic component of a toxin-antitoxin (TA) system. An RNase.

572477:ALVIN RS03325
gene id: 572477:ALVIN_RS03325
uniprot id: D3RPN7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

572477:ALVIN RS03660
gene id: 572477:ALVIN_RS03660
uniprot id: D3RQ81
names: Similarity
messages: Belongs to the UPF0166 family.

572477:ALVIN RS11595
gene id: 572477:ALVIN_RS11595
uniprot id: D3RMV6
names: Similarity
messages: Belongs to the P(II) protein family.

572477:ALVIN RS04470
gene id: 572477:ALVIN_RS04470
uniprot id: D3RR20
names: Function
names: Similarity
messages: Belongs to the NifD/NifK/NifE/NifN family.
messages: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor).

572477:ALVIN RS13555
gene id: 572477:ALVIN_RS13555
uniprot id: D3RQ13
names: Function
names: Similarity
messages: Belongs to the ketopantoate reductase family.
messages: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.

572477:ALVIN RS14190
gene id: 572477:ALVIN_RS14190
uniprot id: D3RQR8
names: Function
names: Similarity
messages: Belongs to the ABC transporter superfamily. Outer membrane lipopolysaccharide export (TC 1.B.42) family.
messages: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system.

572477:ALVIN RS03810
gene id: 572477:ALVIN_RS03810
uniprot id: D3RQB0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseB family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

572477:ALVIN RS15460
gene id: 572477:ALVIN_RS15460
uniprot id: D3RS64
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06830
gene id: 572477:ALVIN_RS06830
uniprot id: D3RT10
names: Function
names: Similarity
messages: Belongs to the HrcA family.
messages: Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons.

572477:ALVIN RS10395
gene id: 572477:ALVIN_RS10395
uniprot id: D3RV75
names: Similarity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.

572477:ALVIN RS05530
gene id: 572477:ALVIN_RS05530
uniprot id: D3RS97
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MepA subfamily.
messages: Cell membrane

572477:ALVIN RS14930
gene id: 572477:ALVIN_RS14930
uniprot id: D3RRI2
names: Caution
names: Function
names: Similarity
messages: Belongs to the dUTPase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.

572477:ALVIN RS12975
gene id: 572477:ALVIN_RS12975
uniprot id: D3RPB9
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: A mutant strain lacking rhd_2599, tusA and dsrE2, although not viable in liquid culture, is clearly sulfur oxidation negative upon growth on solid media containing sulfide, and shows massive accumulation of intercellular sulfur globules.
messages: Cytoplasm
messages: Monomer.
messages: Sulfur carrier protein involved in sulfur trafficking for oxidative dissimilatory sulfur metabolism. Component of a sulfur relay system that starts with the sulfur-mobilizing rhodanese-like protein Rhd_2599 (Alvin_2599), which transfers the sulfur from a low-molecular-weight thiol, maybe glutathione, to the TusA protein (Alvin_2600); TusA serves as the sulfur donor for DsrEFH, which persulfurates DsrC; persulfurated DsrC very probably serves as a direct substrate for reverse-acting sulfite reductase, DsrAB. Is able to catalyze the sulfur transfer reaction from thiosulfate or glutathione (GSSH) to cyanide in vitro, however, thiosulfate is unlikely an in vivo substrate.
messages: Up-regulated under sulfur-oxidizing conditions (at mRNA level), i.e. when grown on reduced sulfur compounds such as sulfide, thiosulfate or elemental sulfur.

572477:ALVIN RS09770
gene id: 572477:ALVIN_RS09770
uniprot id: D3RUN0
names: Similarity
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Homodimer.

572477:ALVIN RS11715
gene id: 572477:ALVIN_RS11715
uniprot id: D3RMY0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

572477:ALVIN RS12725
gene id: 572477:ALVIN_RS12725
uniprot id: P51763
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: Cellular chromatophore membrane
messages: Reaction center is composed of four bacteriochlorophylls, two bacteriopheophytins, two ubiquinones, one iron, and two highly hydrophobic polypeptide chains (designated L and M).
messages: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.

572477:ALVIN RS12685
gene id: 572477:ALVIN_RS12685
uniprot id: D3RP63
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the radical SAM superfamily. Lipoyl synthase family.
messages: Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
messages: Cytoplasm

572477:ALVIN RS02945
gene id: 572477:ALVIN_RS02945
uniprot id: D3RP34
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CheB family.
messages: Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.
messages: Cytoplasm
messages: Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
messages: Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.

572477:ALVIN RS14985
gene id: 572477:ALVIN_RS14985
uniprot id: D3RRJ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the gmhB family.
messages: Cytoplasm

572477:ALVIN RS07335
gene id: 572477:ALVIN_RS07335
uniprot id: D3RTA9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the helicase family. UvrD subfamily.
messages: Homodimer.
messages: Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.

572477:ALVIN RS14995
gene id: 572477:ALVIN_RS14995
uniprot id: D3RRJ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial secretin family. GSP D subfamily.
messages: Cell outer membrane
messages: Membrane

572477:ALVIN RS03360
gene id: 572477:ALVIN_RS03360
uniprot id: D3RPP4
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FBPase class 1 family.
messages: Binds 2 magnesium ions per subunit.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS07650
gene id: 572477:ALVIN_RS07650
uniprot id: D3RTH0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrC family.
messages: Cytoplasm
messages: Interacts with UvrB in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.

572477:ALVIN RS07480
gene id: 572477:ALVIN_RS07480
uniprot id: D3RTD7
names: Function
names: Similarity
messages: Belongs to the aconitase/IPM isomerase family.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.

572477:ALVIN RS04760
gene id: 572477:ALVIN_RS04760
uniprot id: D3RR75
names: Similarity
messages: Belongs to the BolA/IbaG family.

572477:ALVIN RS06920
gene id: 572477:ALVIN_RS06920
uniprot id: D3RT28
names: Function
names: Similarity
messages: Belongs to the NifU family.
messages: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.

572477:ALVIN RS07410
gene id: 572477:ALVIN_RS07410
uniprot id: D3RTC3
names: Function
names: Similarity
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family.
messages: This protein is a Fe-Mo-cofactor biosynthetic component.

572477:ALVIN RS11025
gene id: 572477:ALVIN_RS11025
uniprot id: D3RVW8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the serine/threonine dehydratase family.
messages: Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
messages: Homotetramer.

572477:ALVIN RS14635
gene id: 572477:ALVIN_RS14635
uniprot id: D3RRC5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliN/MopA/SpaO family.
messages: Cell membrane
messages: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

572477:ALVIN RS01355
gene id: 572477:ALVIN_RS01355
uniprot id: D3RMH5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the anthranilate synthase component I family.
messages: Heterotetramer consisting of two non-identical subunits: a beta subunit (TrpG) and a large alpha subunit (TrpE).
messages: Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia.

572477:ALVIN RS09080
gene id: 572477:ALVIN_RS09080
uniprot id: D3RU95
names: Function
names: Similarity
messages: Belongs to the alanine racemase family.
messages: Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.

572477:ALVIN RS16190
gene id: 572477:ALVIN_RS16190
uniprot id: D3RWE0
names: Function
names: Similarity
messages: Belongs to the PINc/VapC protein family.
messages: Toxic component of a toxin-antitoxin (TA) system. An RNase.

572477:ALVIN RS01020
gene id: 572477:ALVIN_RS01020
uniprot id: D3RMB2
names: Similarity
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.

572477:ALVIN RS14195
gene id: 572477:ALVIN_RS14195
uniprot id: D3RQR9
names: Function
names: Similarity
messages: Belongs to the sigma-54 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

572477:ALVIN RS14860
gene id: 572477:ALVIN_RS14860
uniprot id: D3RRG8
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: Allosterically activated by HslU binding.
messages: Belongs to the peptidase T1B family. HslV subfamily.
messages: Cytoplasm
messages: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.

572477:ALVIN RS14550
gene id: 572477:ALVIN_RS14550
uniprot id: D3RRA9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

572477:ALVIN RS15290
gene id: 572477:ALVIN_RS15290
uniprot id: D3RS28
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the shikimate dehydrogenase family.
messages: Homodimer.
messages: Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS04530
gene id: 572477:ALVIN_RS04530
uniprot id: D3RR30
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvP family. N-terminal subunit subfamily.
messages: The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits.

572477:ALVIN RS03445
gene id: 572477:ALVIN_RS03445
uniprot id: D3RPR1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tRNA(Ile)-lysidine synthase family.
messages: Cytoplasm
messages: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
messages: The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding.

572477:ALVIN RS03525
gene id: 572477:ALVIN_RS03525
uniprot id: D3RPS8
names: Similarity
names: Subunit
messages: Belongs to the CarA family.
messages: Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.

572477:ALVIN RS05915
gene id: 572477:ALVIN_RS05915
uniprot id: D3RSH8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecD/SecF family. SecF subfamily.
messages: Cell inner membrane
messages: Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.
messages: Membrane
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.

572477:ALVIN RS03165
gene id: 572477:ALVIN_RS03165
uniprot id: D3RPK5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptF/LptG family.
messages: Component of the lipopolysaccharide transport and assembly complex. The LptBFG transporter is composed of two ATP-binding proteins (LptB) and two transmembrane proteins (LptF and LptG).
messages: Membrane
messages: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane.

572477:ALVIN RS03310
gene id: 572477:ALVIN_RS03310
uniprot id: D3RPN4
names: Function
names: Similarity
messages: Belongs to the FlgD family.
messages: Required for flagellar hook formation. May act as a scaffolding protein.

572477:ALVIN RS13595
gene id: 572477:ALVIN_RS13595
uniprot id: D3RQ21
names: Similarity
messages: Belongs to the asparagine synthetase family.

572477:ALVIN RS01990
gene id: 572477:ALVIN_RS01990
uniprot id: D3RN75
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS00015
gene id: 572477:ALVIN_RS00015
uniprot id: D3RUS5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the beta sliding clamp family.
messages: Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.
messages: Cytoplasm
messages: Forms a ring-shaped head-to-tail homodimer around DNA.

572477:ALVIN RS03650
gene id: 572477:ALVIN_RS03650
uniprot id: D3RQ79
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoB family.
messages: Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
messages: Homotetramer.

572477:ALVIN RS02495
gene id: 572477:ALVIN_RS02495
uniprot id: D3RNU7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RimP family.
messages: Cytoplasm
messages: Required for maturation of 30S ribosomal subunits.

572477:ALVIN RS12195
gene id: 572477:ALVIN_RS12195
uniprot id: D3RNI9
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Membrane
messages: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.
messages: The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).

572477:ALVIN RS01985
gene id: 572477:ALVIN_RS01985
uniprot id: D3RN74
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06970
gene id: 572477:ALVIN_RS06970
uniprot id: D3RT38
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS02045
gene id: 572477:ALVIN_RS02045
uniprot id: D3RN86
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family.
messages: Cytoplasm
messages: Homotrimer.

572477:ALVIN RS12220
gene id: 572477:ALVIN_RS12220
uniprot id: D3RNJ4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAPS reductase family. CysH subfamily.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS) using thioredoxin as an electron donor.
messages: Cytoplasm

572477:ALVIN RS13180
gene id: 572477:ALVIN_RS13180
uniprot id: D3RPG0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ChlB/BchB/BchZ family.
messages: Binds 1 [4Fe-4S] cluster per heterodimer. The cluster is bound at the heterodimer interface by residues from both subunits.
messages: Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
messages: Protochlorophyllide reductase is composed of three subunits; BchL, BchN and BchB. Forms a heterotetramer of two BchB and two BchN subunits.

572477:ALVIN RS00040
gene id: 572477:ALVIN_RS00040
uniprot id: D3RUT0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

572477:ALVIN RS10010
gene id: 572477:ALVIN_RS10010
uniprot id: D3RV06
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AceK family.
messages: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.
messages: Cytoplasm

572477:ALVIN RS14120
gene id: 572477:ALVIN_RS14120
uniprot id: D3RQQ4
names: Similarity
messages: Belongs to the peptidase M20A family. ArgE subfamily.

572477:ALVIN RS04735
gene id: 572477:ALVIN_RS04735
uniprot id: D3RR70
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TolB family.
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
messages: Periplasm
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

572477:ALVIN RS02875
gene id: 572477:ALVIN_RS02875
uniprot id: D3RP19
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
messages: O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.

572477:ALVIN RS03460
gene id: 572477:ALVIN_RS03460
uniprot id: D3RPR4
names: Similarity
messages: Belongs to the thioredoxin family.

572477:ALVIN RS04495
gene id: 572477:ALVIN_RS04495
uniprot id: D3RR25
names: Function
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

572477:ALVIN RS12405
gene id: 572477:ALVIN_RS12405
uniprot id: D3RNN1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
messages: Belongs to the RimM family.
messages: Binds ribosomal protein S19.
messages: Cytoplasm
messages: The PRC barrel domain binds ribosomal protein S19.

572477:ALVIN RS14265
gene id: 572477:ALVIN_RS14265
uniprot id: D3RQT3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transpeptidase family. MrdA subfamily.
messages: Catalyzes cross-linking of the peptidoglycan cell wall.
messages: Cell inner membrane

572477:ALVIN RS02445
gene id: 572477:ALVIN_RS02445
uniprot id: D3RNT7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
messages: Cytoplasm
messages: Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides.

572477:ALVIN RS10485
gene id: 572477:ALVIN_RS10485
uniprot id: D3RV93
names: Function
names: Similarity
messages: Belongs to the GlnE family.
messages: Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell.

572477:ALVIN RS13740
gene id: 572477:ALVIN_RS13740
uniprot id: D3RQ49
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.

572477:ALVIN RS02910
gene id: 572477:ALVIN_RS02910
uniprot id: D3RP27
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS01605
gene id: 572477:ALVIN_RS01605
uniprot id: D3RMM5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adenosylhomocysteinase family.
messages: Binds 1 NAD(+) per subunit.
messages: Cytoplasm
messages: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.

572477:ALVIN RS15040
gene id: 572477:ALVIN_RS15040
uniprot id: D3RRK3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Membrane

572477:ALVIN RS08780
gene id: 572477:ALVIN_RS08780
uniprot id: D3RU37
names: Function
names: Similarity
messages: Belongs to the NusB family.
messages: Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.

572477:ALVIN RS10250
gene id: 572477:ALVIN_RS10250
uniprot id: D3RV48
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNase HII family.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
messages: Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding.

572477:ALVIN RS03995
gene id: 572477:ALVIN_RS03995
uniprot id: D3RQE7
names: Function
names: Subunit
messages: Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
messages: Homodimer. Part of the PDH complex, consisting of multiple copies of pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).

572477:ALVIN RS09240
gene id: 572477:ALVIN_RS09240
uniprot id: D3RUC3
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Homotetramer.
messages: Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS03035
gene id: 572477:ALVIN_RS03035
uniprot id: D3RPI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OpgD/OpgG family.
messages: Periplasm

572477:ALVIN RS02195
gene id: 572477:ALVIN_RS02195
uniprot id: D3RNB6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

572477:ALVIN RS09675
gene id: 572477:ALVIN_RS09675
uniprot id: D3RUL1
names: Function
names: Similarity
messages: Belongs to the rhamnosyl O-methyltransferase family.
messages: Catalyzes the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD).

572477:ALVIN RS14975
gene id: 572477:ALVIN_RS14975
uniprot id: D3RRJ1
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

572477:ALVIN RS11740
gene id: 572477:ALVIN_RS11740
uniprot id: D3RMY5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

572477:ALVIN RS02460
gene id: 572477:ALVIN_RS02460
uniprot id: D3RNU0
names: Similarity
messages: Belongs to the BolA/IbaG family.

572477:ALVIN RS10500
gene id: 572477:ALVIN_RS10500
uniprot id: D3RV96
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
messages: Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.
messages: Cytoplasm
messages: Monomer.
messages: The C-terminal coiled-coil domain is crucial for aminoacylation activity.
messages: ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site.

572477:ALVIN RS15570
gene id: 572477:ALVIN_RS15570
uniprot id: D3RS86
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0161 family.
messages: Cell inner membrane
messages: Could be involved in insertion of integral membrane proteins into the membrane.

572477:ALVIN RS10730
gene id: 572477:ALVIN_RS10730
uniprot id: D3RVR3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutamate 5-kinase family.
messages: Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
messages: Cytoplasm

572477:ALVIN RS10635
gene id: 572477:ALVIN_RS10635
uniprot id: D3RVP2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the chorismate synthase family.
messages: Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
messages: Homotetramer.
messages: Reduced FMN (FMNH(2)).

572477:ALVIN RS11730
gene id: 572477:ALVIN_RS11730
uniprot id: D3RMY3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS17 family.
messages: One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
messages: Part of the 30S ribosomal subunit.

572477:ALVIN RS03255
gene id: 572477:ALVIN_RS03255
uniprot id: D3RPM3
names: Similarity
messages: In the N-terminal section; belongs to the CRISPR-associated nuclease Cas3-HD family.
messages: In the central section; belongs to the CRISPR-associated helicase Cas3 family.

572477:ALVIN RS02240
gene id: 572477:ALVIN_RS02240
uniprot id: D3RNC6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

572477:ALVIN RS09715
gene id: 572477:ALVIN_RS09715
uniprot id: D3RUL9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliS family.
messages: cytosol

572477:ALVIN RS04205
gene id: 572477:ALVIN_RS04205
uniprot id: D3RQJ0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CobS family.
messages: Cell inner membrane
messages: Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

572477:ALVIN RS00310
gene id: 572477:ALVIN_RS00310
uniprot id: P45372
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A large complex of PhaC and PhaE; the ratio of the subunits has been estimated to be from 1:1 to 4:1, with more PhaE than PhaC (PubMed:7957260, PubMed:9888824).
messages: Belongs to the PHA/PHB synthase family. Type III PhaE subfamily.
messages: Cytoplasm
messages: Poly(3-hydroxyalkanoic acids) (PHA), of which PHB is among the most common compounds, has potential uses as a renewable, biodegradable thermoplastic. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation.
messages: Polymerizes D(-)-3-hydroxybutyryl-CoA to create polyhydroxybutyrate (PHB) which consists of thousands of hydroxybutyrate molecules linked end to end (PubMed:7957260). This subunit has no catalytic activity but enhances the activity of PhaC, the catalytic subunit, 100-fold (PubMed:9888824).

572477:ALVIN RS09400
gene id: 572477:ALVIN_RS09400
uniprot id: D3RUF5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

572477:ALVIN RS13965
gene id: 572477:ALVIN_RS13965
uniprot id: D3RQM3
names: Similarity
messages: Belongs to the HupF/HypC family.

572477:ALVIN RS13185
gene id: 572477:ALVIN_RS13185
uniprot id: D3RPG1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the BchN/ChlN family.
messages: Binds 1 [4Fe-4S] cluster per heterodimer. The cluster is bound at the heterodimer interface by residues from both subunits.
messages: Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
messages: Protochlorophyllide reductase is composed of three subunits; BchL, BchN and BchB. Forms a heterotetramer of two BchB and two BchN subunits.

572477:ALVIN RS14925
gene id: 572477:ALVIN_RS14925
uniprot id: D3RRI1
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 FMN per subunit.
messages: Catalyzes two sequential steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine. In the second step the latter compound is decarboxylated to form 4'-phosphopantotheine.
messages: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine.
messages: In the C-terminal section; belongs to the PPC synthetase family.
messages: In the N-terminal section; belongs to the HFCD (homo-oligomeric flavin containing Cys decarboxylase) superfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS16575
gene id: 572477:ALVIN_RS16575
uniprot id: D3RT02
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS06140
gene id: 572477:ALVIN_RS06140
uniprot id: D3RSM3
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

572477:ALVIN RS02970
gene id: 572477:ALVIN_RS02970
uniprot id: D3RPG7
names: Similarity
messages: Belongs to the protease inhibitor I39 (alpha-2-macroglobulin) family. Bacterial alpha-2-macroglobulin subfamily.

572477:ALVIN RS15565
gene id: 572477:ALVIN_RS15565
uniprot id: D3RS85
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
messages: Cell inner membrane
messages: Interacts with the Sec translocase complex via SecD. Specifically interacts with transmembrane segments of nascent integral membrane proteins during membrane integration.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.

572477:ALVIN RS00215
gene id: 572477:ALVIN_RS00215
uniprot id: D3RUW6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase delta chain family.
messages: Cell inner membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.

572477:ALVIN RS01665
gene id: 572477:ALVIN_RS01665
uniprot id: D3RN13
names: Similarity
messages: Belongs to the YoeB family.

572477:ALVIN RS13765
gene id: 572477:ALVIN_RS13765
uniprot id: D3RQ54
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the pantothenate synthetase family.
messages: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate.
messages: Cytoplasm
messages: Homodimer.
messages: The reaction proceeds by a bi uni uni bi ping pong mechanism.

572477:ALVIN RS14230
gene id: 572477:ALVIN_RS14230
uniprot id: D3RQS6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PEP-utilizing enzyme family.
messages: Cytoplasm
messages: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).

572477:ALVIN RS05455
gene id: 572477:ALVIN_RS05455
uniprot id: D3RRY6
names: Similarity
messages: Belongs to the aspartokinase family.

572477:ALVIN RS13350
gene id: 572477:ALVIN_RS13350
uniprot id: D3RPX1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell inner membrane
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS04200
gene id: 572477:ALVIN_RS04200
uniprot id: D3RQI9
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS14640
gene id: 572477:ALVIN_RS14640
uniprot id: D3RRC6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliM family.
messages: Cell inner membrane
messages: FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

572477:ALVIN RS00330
gene id: 572477:ALVIN_RS00330
uniprot id: P45375
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Cytoplasm

572477:ALVIN RS03790
gene id: 572477:ALVIN_RS03790
uniprot id: D3RQA6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CysZ family.
messages: Cell inner membrane
messages: High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway.

572477:ALVIN RS13660
gene id: 572477:ALVIN_RS13660
uniprot id: D3RQ33
names: Function
names: Similarity
messages: Belongs to the glucose-1-phosphate thymidylyltransferase family.
messages: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis.

572477:ALVIN RS08520
gene id: 572477:ALVIN_RS08520
uniprot id: D3RTZ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family.
messages: Membrane

572477:ALVIN RS06305
gene id: 572477:ALVIN_RS06305
uniprot id: D3RSQ6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS07450
gene id: 572477:ALVIN_RS07450
uniprot id: D3RTD1
names: Similarity
messages: Belongs to the SufE family.
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.

572477:ALVIN RS06610
gene id: 572477:ALVIN_RS06610
uniprot id: D3RSW7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS17940
gene id: 572477:ALVIN_RS17940
uniprot id: D3RRU5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal stress protein A family.
messages: Cytoplasm

572477:ALVIN RS06010
gene id: 572477:ALVIN_RS06010
uniprot id: D3RSJ7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.
messages: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys-tRNA(Pro) is not edited by ProRS.
messages: Consists of three domains: the N-terminal catalytic domain, the editing domain and the C-terminal anticodon-binding domain.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS05630
gene id: 572477:ALVIN_RS05630
uniprot id: D3RSB8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HisA/HisF family.
messages: Cytoplasm
messages: Heterodimer of HisH and HisF.
messages: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
messages: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.

572477:ALVIN RS03630
gene id: 572477:ALVIN_RS03630
uniprot id: D3RQ75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DsrC/TusE family.
messages: Cytoplasm

572477:ALVIN RS07315
gene id: 572477:ALVIN_RS07315
uniprot id: D3RTA6
names: Similarity
messages: Belongs to the Skp family.

572477:ALVIN RS13235
gene id: 572477:ALVIN_RS13235
uniprot id: D3RPU8
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS03940
gene id: 572477:ALVIN_RS03940
uniprot id: D3RQD6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BamD family.
messages: Cell outer membrane
messages: Part of the Bam complex.
messages: Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.

572477:ALVIN RS08775
gene id: 572477:ALVIN_RS08775
uniprot id: D3RU36
names: Caution
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the thiamine-monophosphate kinase family.
messages: Catalyzes the ATP-dependent phosphorylation of thiamine-monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Reaction mechanism of ThiL seems to utilize a direct, inline transfer of the gamma-phosphate of ATP to TMP rather than a phosphorylated enzyme intermediate.

572477:ALVIN RS03670
gene id: 572477:ALVIN_RS03670
uniprot id: D3RQ83
names: Similarity
messages: Belongs to the ABC transporter superfamily. Ycf16 family.

572477:ALVIN RS11140
gene id: 572477:ALVIN_RS11140
uniprot id: D3RVZ2
names: Function
messages: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.

572477:ALVIN RS05405
gene id: 572477:ALVIN_RS05405
uniprot id: D3RRX5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TmcA family.
messages: Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP).
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: nucleolus

572477:ALVIN RS10710
gene id: 572477:ALVIN_RS10710
uniprot id: D3RVQ8
names: Function
names: Similarity
messages: Belongs to the Ap4A hydrolase family.
messages: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP.

572477:ALVIN RS14585
gene id: 572477:ALVIN_RS14585
uniprot id: D3RRB6
names: Function
names: Similarity
messages: Belongs to the GTP-binding SRP family.
messages: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum.

572477:ALVIN RS05235
gene id: 572477:ALVIN_RS05235
uniprot id: D3RRU1
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS13655
gene id: 572477:ALVIN_RS13655
uniprot id: D3RQ32
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.

572477:ALVIN RS16565
gene id: 572477:ALVIN_RS16565
uniprot id: D3RSZ9
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS14070
gene id: 572477:ALVIN_RS14070
uniprot id: D3RQP4
names: Similarity
messages: Belongs to the MotB family.

572477:ALVIN RS00290
gene id: 572477:ALVIN_RS00290
uniprot id: D3RUY1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ThiC family.
messages: Binds 1 [4Fe-4S] cluster per subunit. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
messages: Homodimer.

572477:ALVIN RS13425
gene id: 572477:ALVIN_RS13425
uniprot id: D3RPY6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS00815
gene id: 572477:ALVIN_RS00815
uniprot id: D3RVK4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP F family.
messages: Membrane

572477:ALVIN RS04525
gene id: 572477:ALVIN_RS04525
uniprot id: D3RR29
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the peroxiredoxin family. Tpx subfamily.
messages: Homodimer.
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this atypical 2-Cys peroxiredoxin, C(R) is present in the same subunit to form an intramolecular disulfide. The disulfide is subsequently reduced by thioredoxin.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

572477:ALVIN RS01880
gene id: 572477:ALVIN_RS01880
uniprot id: D3RN54
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.

572477:ALVIN RS05505
gene id: 572477:ALVIN_RS05505
uniprot id: D3RS90
names: Function
names: Similarity
messages: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits).
messages: In the C-terminal section; belongs to the transpeptidase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 51 family.

572477:ALVIN RS16180
gene id: 572477:ALVIN_RS16180
uniprot id: D3RWD8
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

572477:ALVIN RS11120
gene id: 572477:ALVIN_RS11120
uniprot id: D3RVY8
names: Similarity
messages: Belongs to the anti-sigma-factor antagonist family.

572477:ALVIN RS08155
gene id: 572477:ALVIN_RS08155
uniprot id: D3RTR9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytidylate kinase family. Type 1 subfamily.
messages: Cytoplasm

572477:ALVIN RS04875
gene id: 572477:ALVIN_RS04875
uniprot id: D3RRM1
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

572477:ALVIN RS05745
gene id: 572477:ALVIN_RS05745
uniprot id: D3RSE1
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS11890
gene id: 572477:ALVIN_RS11890
uniprot id: D3RN11
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homohexamer.
messages: Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P).

572477:ALVIN RS01895
gene id: 572477:ALVIN_RS01895
uniprot id: D3RN57
names: Similarity
messages: Belongs to the PhoU family.

572477:ALVIN RS16195
gene id: 572477:ALVIN_RS16195
uniprot id: D3RWE1
names: Similarity
messages: Belongs to the type-I restriction system S methylase family.

572477:ALVIN RS05070
gene id: 572477:ALVIN_RS05070
uniprot id: D3RRQ7
names: Similarity
messages: Belongs to the HSP15 family.

572477:ALVIN RS03930
gene id: 572477:ALVIN_RS03930
uniprot id: D3RQD4
names: Caution
names: Function
names: Similarity
messages: Belongs to the NAD synthetase family.
messages: Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
messages: In the C-terminal section; belongs to the NAD synthetase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS06210
gene id: 572477:ALVIN_RS06210
uniprot id: D3RSN7
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS15135
gene id: 572477:ALVIN_RS15135
uniprot id: D3RRZ7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.
messages: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
messages: Homodimer.

572477:ALVIN RS12145
gene id: 572477:ALVIN_RS12145
uniprot id: D3RNH9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the triosephosphate isomerase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P).

572477:ALVIN RS14980
gene id: 572477:ALVIN_RS14980
uniprot id: D3RRJ2
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

572477:ALVIN RS06915
gene id: 572477:ALVIN_RS06915
uniprot id: D3RT27
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
messages: Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Seems to participate in the biosynthesis of the nitrogenase metalloclusters by providing the inorganic sulfur required for the Fe-S core formation.
messages: Homodimer.

572477:ALVIN RS14215
gene id: 572477:ALVIN_RS14215
uniprot id: D3RQS3
names: Function
names: Similarity
messages: Belongs to the RapZ-like family.
messages: Displays ATPase and GTPase activities.

572477:ALVIN RS04945
gene id: 572477:ALVIN_RS04945
uniprot id: D3RRN4
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M15D family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.

572477:ALVIN RS04070
gene id: 572477:ALVIN_RS04070
uniprot id: Q46482
names: Cofactor
names: Similarity
messages: Belongs to the GARS family.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.

572477:ALVIN RS05260
gene id: 572477:ALVIN_RS05260
uniprot id: D3RRU6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP transporter large permease family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
messages: The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins.

572477:ALVIN RS10415
gene id: 572477:ALVIN_RS10415
uniprot id: D3RV79
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the diaminopimelate epimerase family.
messages: Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS06240
gene id: 572477:ALVIN_RS06240
uniprot id: D3RSP3
names: Domain
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the CobB/CbiA family.
messages: Belongs to the CobB/CobQ family. CobQ subfamily.
messages: Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source.
messages: Comprises of two domains. The C-terminal domain contains the binding site for glutamine and catalyzes the hydrolysis of this substrate to glutamate and ammonia. The N-terminal domain is anticipated to bind ATP and cobyrinate and catalyzes the ultimate synthesis of the diamide product. The ammonia produced via the glutaminase domain is probably translocated to the adjacent domain via a molecular tunnel, where it reacts with an activated intermediate.
messages: The a and c carboxylates of cobyrinate are activated for nucleophilic attack via formation of a phosphorylated intermediate by ATP. CbiA catalyzes first the amidation of the c-carboxylate, and then that of the a-carboxylate.

572477:ALVIN RS11200
gene id: 572477:ALVIN_RS11200
uniprot id: D3RW03
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane

572477:ALVIN RS05940
gene id: 572477:ALVIN_RS05940
uniprot id: D3RSI3
names: Similarity
messages: Belongs to the NadC/ModD family.

572477:ALVIN RS00225
gene id: 572477:ALVIN_RS00225
uniprot id: D3RUW8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.

572477:ALVIN RS14515
gene id: 572477:ALVIN_RS14515
uniprot id: D3RRA2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the MoaC family.
messages: Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).
messages: Homohexamer; trimer of dimers.

572477:ALVIN RS06725
gene id: 572477:ALVIN_RS06725
uniprot id: D3RSZ0
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

572477:ALVIN RS14185
gene id: 572477:ALVIN_RS14185
uniprot id: D3RQR7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptA family.
messages: Component of the lipopolysaccharide transport and assembly complex.
messages: Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
messages: Periplasm

572477:ALVIN RS12265
gene id: 572477:ALVIN_RS12265
uniprot id: D3RNK3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FdhE family.
messages: Cytoplasm
messages: Necessary for formate dehydrogenase activity.

572477:ALVIN RS14630
gene id: 572477:ALVIN_RS14630
uniprot id: D3RRC4
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliO/MopB family.
messages: Cell membrane

572477:ALVIN RS00960
gene id: 572477:ALVIN_RS00960
uniprot id: D3RVN1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNA methyltransferase RsmE family.
messages: Cytoplasm
messages: Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.

572477:ALVIN RS07380
gene id: 572477:ALVIN_RS07380
uniprot id: D3RTB7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
messages: Interacts with the RNAP. Has a higher affinity for the core RNAP than for the holoenzyme. Its ATPase activity is stimulated by binding to RNAP.
messages: Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair.

572477:ALVIN RS12615
gene id: 572477:ALVIN_RS12615
uniprot id: D3RP47
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatB family.
messages: Cell inner membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
messages: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.

572477:ALVIN RS08815
gene id: 572477:ALVIN_RS08815
uniprot id: D3RU44
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS07475
gene id: 572477:ALVIN_RS07475
uniprot id: D3RTD6
names: Similarity
messages: Belongs to the UPF0045 family.

572477:ALVIN RS15110
gene id: 572477:ALVIN_RS15110
uniprot id: D3RRL7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecB family.
messages: Cytoplasm
messages: Homotetramer, a dimer of dimers. One homotetramer interacts with 1 SecA dimer.
messages: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.

572477:ALVIN RS02075
gene id: 572477:ALVIN_RS02075
uniprot id: D3RN92
names: Function
names: Similarity
messages: Belongs to the RecR family.
messages: May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.

572477:ALVIN RS15200
gene id: 572477:ALVIN_RS15200
uniprot id: D3RS10
names: Similarity
messages: Belongs to the helicase family. UvrD subfamily.

572477:ALVIN RS01330
gene id: 572477:ALVIN_RS01330
uniprot id: D3RMH1
names: Cofactor
names: Similarity
messages: Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
messages: Binds 3 [4Fe-4S] clusters per subunit.

572477:ALVIN RS04390
gene id: 572477:ALVIN_RS04390
uniprot id: D3RR04
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell inner membrane
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane.

572477:ALVIN RS05790
gene id: 572477:ALVIN_RS05790
uniprot id: D3RSF1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
messages: Binds 3 [4Fe-4S] clusters.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS02575
gene id: 572477:ALVIN_RS02575
uniprot id: D3RNW3
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS11725
gene id: 572477:ALVIN_RS11725
uniprot id: D3RMY2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

572477:ALVIN RS05035
gene id: 572477:ALVIN_RS05035
uniprot id: D3RRQ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

572477:ALVIN RS05730
gene id: 572477:ALVIN_RS05730
uniprot id: D3RSD8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the KdpA family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds the periplasmic potassium ions and delivers the ions to the membrane domain of KdpB through an intramembrane tunnel.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

572477:ALVIN RS14415
gene id: 572477:ALVIN_RS14415
uniprot id: D3RQW1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily.
messages: Cell inner membrane
messages: Homodimer. Forms a membrane-associated complex with FtsX.
messages: Part of the ABC transporter FtsEX involved in cellular division. Important for assembly or stability of the septal ring.

572477:ALVIN RS09885
gene id: 572477:ALVIN_RS09885
uniprot id: D3RUQ4
names: Function
names: Similarity
messages: Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily.
messages: Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).

572477:ALVIN RS05050
gene id: 572477:ALVIN_RS05050
uniprot id: D3RRQ3
names: Function
names: Similarity
messages: Belongs to the LpxK family.
messages: Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).

572477:ALVIN RS01685
gene id: 572477:ALVIN_RS01685
uniprot id: D3RN17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CitM (TC 2.A.11) transporter family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS06440
gene id: 572477:ALVIN_RS06440
uniprot id: D3RST3
names: Subunit
messages: Monomer.

572477:ALVIN RS08215
gene id: 572477:ALVIN_RS08215
uniprot id: D3RTT1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Membrane

572477:ALVIN RS15680
gene id: 572477:ALVIN_RS15680
uniprot id: D3RW33
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone-like protein H-NS family.
messages: nucleoid

572477:ALVIN RS13385
gene id: 572477:ALVIN_RS13385
uniprot id: D3RPX8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PhoU family.
messages: Cytoplasm
messages: Homodimer.
messages: Plays a role in the regulation of phosphate uptake.

572477:ALVIN RS05210
gene id: 572477:ALVIN_RS05210
uniprot id: D3RRT6
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS01960
gene id: 572477:ALVIN_RS01960
uniprot id: D3RN69
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IspF family.
messages: Binds 1 divalent metal cation per subunit.
messages: Homotrimer.
messages: Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS06425
gene id: 572477:ALVIN_RS06425
uniprot id: D3RST0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.
messages: Homotetramer.
messages: Uses inorganic polyphosphate (polyP) as a donor to convert GDP to GTP or ADP to ATP.

572477:ALVIN RS15355
gene id: 572477:ALVIN_RS15355
uniprot id: D3RS40
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the FPG family.
messages: Binds 1 zinc ion per subunit.
messages: Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
messages: Monomer.

572477:ALVIN RS04150
gene id: 572477:ALVIN_RS04150
uniprot id: D3RQH9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
messages: Membrane

572477:ALVIN RS06180
gene id: 572477:ALVIN_RS06180
uniprot id: O33998
names: Cofactor
names: Function
messages: Binds 1 siroheme per subunit.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration.

572477:ALVIN RS00505
gene id: 572477:ALVIN_RS00505
uniprot id: D3RVE6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the thiamine-phosphate synthase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).

572477:ALVIN RS09505
gene id: 572477:ALVIN_RS09505
uniprot id: D3RUH6
names: Similarity
messages: Belongs to the CutA family.

572477:ALVIN RS09485
gene id: 572477:ALVIN_RS09485
uniprot id: D3RUH2
names: Function
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.

572477:ALVIN RS14235
gene id: 572477:ALVIN_RS14235
uniprot id: D3RQS7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a magnesium transporter.
messages: Belongs to the SLC41A transporter family.
messages: Cell membrane
messages: Homodimer.
messages: Membrane

572477:ALVIN RS02785
gene id: 572477:ALVIN_RS02785
uniprot id: D3RP01
names: Similarity
messages: Belongs to the helicase family. RecQ subfamily.

572477:ALVIN RS10935
gene id: 572477:ALVIN_RS10935
uniprot id: D3RVV2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50B family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS04125
gene id: 572477:ALVIN_RS04125
uniprot id: D3RQH4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. PrmA family.
messages: Cytoplasm
messages: Methylates ribosomal protein L11.

572477:ALVIN RS09970
gene id: 572477:ALVIN_RS09970
uniprot id: D3RUS2
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspG family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.

572477:ALVIN RS15310
gene id: 572477:ALVIN_RS15310
uniprot id: D3RS32
names: Similarity
messages: Belongs to the thioredoxin family.

572477:ALVIN RS03160
gene id: 572477:ALVIN_RS03160
uniprot id: D3RPK4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M17 family.
messages: Binds 2 manganese ions per subunit.
messages: Cytoplasm
messages: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.

572477:ALVIN RS09180
gene id: 572477:ALVIN_RS09180
uniprot id: D3RUB4
names: Cofactor
messages: Can also use Mn(2+) ion.

572477:ALVIN RS06875
gene id: 572477:ALVIN_RS06875
uniprot id: D3RT19
names: Function
names: Similarity
messages: Belongs to the UbiT family.
messages: Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Likely functions as an accessory factor.

572477:ALVIN RS01955
gene id: 572477:ALVIN_RS01955
uniprot id: D3RN68
names: Function
names: Similarity
messages: Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
messages: Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).

572477:ALVIN RS06675
gene id: 572477:ALVIN_RS06675
uniprot id: D3RSY0
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS09930
gene id: 572477:ALVIN_RS09930
uniprot id: D3RUR4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

572477:ALVIN RS12460
gene id: 572477:ALVIN_RS12460
uniprot id: D3RNP2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCF family. Uup subfamily.
messages: Cytoplasm
messages: Probably plays a role in ribosome assembly or function. May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps. Binds DNA and has ATPase activity.

572477:ALVIN RS12585
gene id: 572477:ALVIN_RS12585
uniprot id: D3RP41
names: Similarity
messages: Belongs to the carbon-nitrogen hydrolase superfamily. NIT1/NIT2 family.

572477:ALVIN RS07430
gene id: 572477:ALVIN_RS07430
uniprot id: D3RTC7
names: Function
names: Similarity
messages: Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.
messages: Belongs to the glycogen phosphorylase family.
messages: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.

572477:ALVIN RS03500
gene id: 572477:ALVIN_RS03500
uniprot id: D3RPS3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS07040
gene id: 572477:ALVIN_RS07040
uniprot id: D3RT52
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: By heat shock.
messages: Cytoplasm
messages: Homohexamer. Organized in a ring with a central cavity.

572477:ALVIN RS03000
gene id: 572477:ALVIN_RS03000
uniprot id: D3RPH3
names: Similarity
messages: Belongs to the thioredoxin family.

572477:ALVIN RS10855
gene id: 572477:ALVIN_RS10855
uniprot id: D3RVT6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmE/CycJ family.
messages: Cell inner membrane
messages: Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.

572477:ALVIN RS09395
gene id: 572477:ALVIN_RS09395
uniprot id: D3RUF4
names: Function
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
messages: Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.

572477:ALVIN RS01290
gene id: 572477:ALVIN_RS01290
uniprot id: D3RMG3
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS02975
gene id: 572477:ALVIN_RS02975
uniprot id: D3RPG8
names: Similarity
messages: In the C-terminal section; belongs to the transpeptidase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 51 family.

572477:ALVIN RS09270
gene id: 572477:ALVIN_RS09270
uniprot id: D3RUC9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane

572477:ALVIN RS11395
gene id: 572477:ALVIN_RS11395
uniprot id: D3RMR7
names: Similarity
messages: Belongs to the UDPGP type 2 family.

572477:ALVIN RS00595
gene id: 572477:ALVIN_RS00595
uniprot id: D3RVG0
names: Function
names: Similarity
messages: Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.
messages: Belongs to the Nudix hydrolase family. RppH subfamily.

572477:ALVIN RS15530
gene id: 572477:ALVIN_RS15530
uniprot id: D3RS78
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS00190
gene id: 572477:ALVIN_RS00190
uniprot id: D3RUW1
names: Function
names: Similarity
messages: Belongs to the ParB family.
messages: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication.

572477:ALVIN RS14495
gene id: 572477:ALVIN_RS14495
uniprot id: D3RR98
names: Similarity
messages: Belongs to the UbiH/COQ6 family.

572477:ALVIN RS05985
gene id: 572477:ALVIN_RS05985
uniprot id: D3RSJ2
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: A single active site specifically recognizes both ATP and CTP and is responsible for their addition.
messages: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 1 subfamily.
messages: Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.
messages: Comprises two domains: an N-terminal domain containing the nucleotidyltransferase activity and a C-terminal HD domain associated with both phosphodiesterase and phosphatase activities.
messages: Magnesium is required for nucleotidyltransferase activity.
messages: Monomer. Can also form homodimers and oligomers.
messages: Nickel for phosphatase activity.

572477:ALVIN RS01190
gene id: 572477:ALVIN_RS01190
uniprot id: D3RME4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
messages: Cell inner membrane

572477:ALVIN RS01470
gene id: 572477:ALVIN_RS01470
uniprot id: D3RMJ8
names: Function
names: Similarity
messages: Belongs to the alpha-ketoglutarate dehydrogenase family.
messages: E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).

572477:ALVIN RS03315
gene id: 572477:ALVIN_RS03315
uniprot id: D3RPN5
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.

572477:ALVIN RS00775
gene id: 572477:ALVIN_RS00775
uniprot id: D3RVJ6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the RuvC family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.

572477:ALVIN RS03335
gene id: 572477:ALVIN_RS03335
uniprot id: D3RPN9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body
messages: Belongs to the FlgI family.
messages: Periplasm
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.

572477:ALVIN RS03330
gene id: 572477:ALVIN_RS03330
uniprot id: D3RPN8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
messages: Bacterial flagellum basal body
messages: Belongs to the FlgH family.
messages: Cell outer membrane
messages: Membrane
messages: The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.

572477:ALVIN RS07685
gene id: 572477:ALVIN_RS07685
uniprot id: D3RTH7
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetyltransferase family. ArgA subfamily.
messages: Cytoplasm
messages: In bacteria which possess the bifunctional enzyme ornithine acetyltransferase/N-acetylglutamate synthase (ArgJ), ArgA fulfills an anaplerotic role.

572477:ALVIN RS08150
gene id: 572477:ALVIN_RS08150
uniprot id: D3RTR8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS1 family.

572477:ALVIN RS06205
gene id: 572477:ALVIN_RS06205
uniprot id: D3RSN6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dsrC/tusE family.
messages: Cytoplasm
messages: Part of a sulfur-relay system.

572477:ALVIN RS10335
gene id: 572477:ALVIN_RS10335
uniprot id: D3RV63
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the polypeptide deformylase family.
messages: Binds 1 Fe(2+) ion.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.

572477:ALVIN RS04745
gene id: 572477:ALVIN_RS04745
uniprot id: D3RR72
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CpoB family.
messages: Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division.
messages: Periplasm

572477:ALVIN RS16455
gene id: 572477:ALVIN_RS16455
uniprot id: D3RP23
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

572477:ALVIN RS10455
gene id: 572477:ALVIN_RS10455
uniprot id: D3RV87
names: Similarity
messages: Belongs to the anti-sigma-factor antagonist family.

572477:ALVIN RS06485
gene id: 572477:ALVIN_RS06485
uniprot id: D3RSU2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S1C family.
messages: Periplasm

572477:ALVIN RS07440
gene id: 572477:ALVIN_RS07440
uniprot id: D3RTC9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the succinate/malate CoA ligase beta subunit family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterotetramer of two alpha and two beta subunits.
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.

572477:ALVIN RS13525
gene id: 572477:ALVIN_RS13525
uniprot id: D3RQ07
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseA family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

572477:ALVIN RS07695
gene id: 572477:ALVIN_RS07695
uniprot id: D3RTH9
names: Similarity
messages: Belongs to the universal stress protein A family.

572477:ALVIN RS10600
gene id: 572477:ALVIN_RS10600
uniprot id: D3RVB6
names: Function
names: Similarity
messages: Belongs to the DHPS family.
messages: Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives.

572477:ALVIN RS05735
gene id: 572477:ALVIN_RS05735
uniprot id: D3RSD9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.
messages: Cell inner membrane
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system and for the release of the potassium ions to the cytoplasm.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

572477:ALVIN RS11300
gene id: 572477:ALVIN_RS11300
uniprot id: D3RMP8
names: Similarity
messages: Belongs to the ribosome association toxin RatA family.

572477:ALVIN RS00010
gene id: 572477:ALVIN_RS00010
uniprot id: D3RUS4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaA family.
messages: Cytoplasm
messages: Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.

572477:ALVIN RS03510
gene id: 572477:ALVIN_RS03510
uniprot id: D3RPS6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS14355
gene id: 572477:ALVIN_RS14355
uniprot id: D3RQV0
names: PTM
messages: Binds 2 heme c groups covalently per subunit.

572477:ALVIN RS07030
gene id: 572477:ALVIN_RS07030
uniprot id: D3RT50
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Cytoplasm
messages: Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.

572477:ALVIN RS14400
gene id: 572477:ALVIN_RS14400
uniprot id: D3RQV8
names: Similarity
messages: Belongs to the peptidase M16 family.

572477:ALVIN RS11520
gene id: 572477:ALVIN_RS11520
uniprot id: D3RMU1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TerC family.
messages: Membrane

572477:ALVIN RS10190
gene id: 572477:ALVIN_RS10190
uniprot id: D3RV36
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UMP kinase family.
messages: Catalyzes the reversible phosphorylation of UMP to UDP.
messages: Cytoplasm
messages: Homohexamer.
messages: Inhibited by UTP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS12855
gene id: 572477:ALVIN_RS12855
uniprot id: D3RP94
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. DsbA subfamily.
messages: Periplasm

572477:ALVIN RS08225
gene id: 572477:ALVIN_RS08225
uniprot id: D3RTT3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.
messages: Belongs to the SrkA/RdoA protein kinase family.
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS14935
gene id: 572477:ALVIN_RS14935
uniprot id: D3RRI3
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS08315
gene id: 572477:ALVIN_RS08315
uniprot id: D3RTV0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

572477:ALVIN RS13745
gene id: 572477:ALVIN_RS13745
uniprot id: D3RQ50
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: Membrane

572477:ALVIN RS10580
gene id: 572477:ALVIN_RS10580
uniprot id: D3RVB2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available.
messages: Belongs to the UppP family.
messages: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS06945
gene id: 572477:ALVIN_RS06945
uniprot id: D3RT33
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS01840
gene id: 572477:ALVIN_RS01840
uniprot id: D3RN46
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. DsbC subfamily.
messages: Periplasm
messages: Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process.

572477:ALVIN RS03570
gene id: 572477:ALVIN_RS03570
uniprot id: D3RPT7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS13175
gene id: 572477:ALVIN_RS13175
uniprot id: D3RPF9
names: Similarity
messages: Belongs to the Mg-chelatase subunit H family.

572477:ALVIN RS05930
gene id: 572477:ALVIN_RS05930
uniprot id: D3RSI1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.

572477:ALVIN RS12110
gene id: 572477:ALVIN_RS12110
uniprot id: D3RNH3
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

572477:ALVIN RS05075
gene id: 572477:ALVIN_RS05075
uniprot id: D3RRQ8
names: Function
names: Similarity
messages: Belongs to the glutaredoxin family.
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.

572477:ALVIN RS09415
gene id: 572477:ALVIN_RS09415
uniprot id: D3RUF8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. FabH family.
messages: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.
messages: Cytoplasm
messages: Homodimer.
messages: The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH.

572477:ALVIN RS14705
gene id: 572477:ALVIN_RS14705
uniprot id: D3RRD8
names: Similarity
messages: Belongs to the MotB family.

572477:ALVIN RS13055
gene id: 572477:ALVIN_RS13055
uniprot id: D3RPD5
names: Function
names: Similarity
messages: Belongs to the AIR carboxylase family. Class I subfamily.
messages: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).

572477:ALVIN RS01650
gene id: 572477:ALVIN_RS01650
uniprot id: D3RMN4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
messages: Cell membrane
messages: Heterodimer of a large and a small subunit.

572477:ALVIN RS05040
gene id: 572477:ALVIN_RS05040
uniprot id: D3RRQ1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

572477:ALVIN RS07105
gene id: 572477:ALVIN_RS07105
uniprot id: D3RT63
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FtsK/SpoIIIE/SftA family.
messages: Membrane

572477:ALVIN RS05920
gene id: 572477:ALVIN_RS05920
uniprot id: D3RSH9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecD/SecF family. SecD subfamily.
messages: Cell inner membrane
messages: Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.

572477:ALVIN RS06035
gene id: 572477:ALVIN_RS06035
uniprot id: D3RSK2
names: Function
names: Similarity
messages: Belongs to the DNA mismatch repair MutL/HexB family.
messages: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.

572477:ALVIN RS02130
gene id: 572477:ALVIN_RS02130
uniprot id: D3RNA3
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

572477:ALVIN RS08005
gene id: 572477:ALVIN_RS08005
uniprot id: D3RTN9
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
messages: Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
messages: Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.
messages: Cytoplasm
messages: Homodimer. The tRNA molecule binds across the dimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS04725
gene id: 572477:ALVIN_RS04725
uniprot id: D3RR68
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ExbD/TolR family.
messages: Cell inner membrane
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

572477:ALVIN RS02955
gene id: 572477:ALVIN_RS02955
uniprot id: D3RPG4
names: Similarity
messages: Belongs to the acyl coenzyme A hydrolase family.

572477:ALVIN RS02285
gene id: 572477:ALVIN_RS02285
uniprot id: D3RND5
names: Function
names: Similarity
messages: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
messages: Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.

572477:ALVIN RS04130
gene id: 572477:ALVIN_RS04130
uniprot id: D3RQH5
names: Function
names: Similarity
messages: Belongs to the AlaDH/PNT family.
messages: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.

572477:ALVIN RS09105
gene id: 572477:ALVIN_RS09105
uniprot id: D3RUA0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PlsY family.
messages: Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Probably interacts with PlsX.

572477:ALVIN RS09280
gene id: 572477:ALVIN_RS09280
uniprot id: D3RUD1
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.

572477:ALVIN RS06825
gene id: 572477:ALVIN_RS06825
uniprot id: D3RT09
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD kinase family.
messages: Cytoplasm
messages: Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS07720
gene id: 572477:ALVIN_RS07720
uniprot id: D3RTI4
names: Similarity
messages: Belongs to the PTPS family. QueD subfamily.

572477:ALVIN RS11870
gene id: 572477:ALVIN_RS11870
uniprot id: D3RN07
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

572477:ALVIN RS04535
gene id: 572477:ALVIN_RS04535
uniprot id: D3RR31
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

572477:ALVIN RS03675
gene id: 572477:ALVIN_RS03675
uniprot id: D3RQ84
names: Similarity
messages: Belongs to the UPF0051 (ycf24) family.

572477:ALVIN RS05815
gene id: 572477:ALVIN_RS05815
uniprot id: D3RSF6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell inner membrane
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS03535
gene id: 572477:ALVIN_RS03535
uniprot id: D3RPT0
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.

572477:ALVIN RS05445
gene id: 572477:ALVIN_RS05445
uniprot id: D3RRY4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecX family.
messages: Cytoplasm
messages: Modulates RecA activity.

572477:ALVIN RS11680
gene id: 572477:ALVIN_RS11680
uniprot id: D3RMX3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Binds to the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

572477:ALVIN RS04075
gene id: 572477:ALVIN_RS04075
uniprot id: Q46481
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family. LpxA subfamily.
messages: Cytoplasm
messages: Homotrimer.
messages: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.

572477:ALVIN RS04740
gene id: 572477:ALVIN_RS04740
uniprot id: D3RR71
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Pal lipoprotein family.
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

572477:ALVIN RS10595
gene id: 572477:ALVIN_RS10595
uniprot id: D3RVB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits).
messages: In the C-terminal section; belongs to the transpeptidase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 51 family.
messages: Membrane

572477:ALVIN RS10685
gene id: 572477:ALVIN_RS10685
uniprot id: D3RVQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the gamma-glutamyl phosphate reductase family.
messages: Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
messages: Cytoplasm

572477:ALVIN RS10185
gene id: 572477:ALVIN_RS10185
uniprot id: D3RV35
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
messages: Belongs to the EF-Ts family.
messages: Cytoplasm

572477:ALVIN RS10170
gene id: 572477:ALVIN_RS10170
uniprot id: D3RV32
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
messages: Belongs to the GlnD family.
messages: Has four distinct domains: an N-terminal nucleotidyltransferase (NT) domain responsible for UTase activity, a central HD domain that encodes UR activity, and two C-terminal ACT domains that seem to have a role in glutamine sensing.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism.
messages: Uridylyltransferase (UTase) activity is inhibited by glutamine, while glutamine activates uridylyl-removing (UR) activity.

572477:ALVIN RS10795
gene id: 572477:ALVIN_RS10795
uniprot id: D3RVS5
names: Similarity
messages: Belongs to the 5'-nucleotidase family.

572477:ALVIN RS09090
gene id: 572477:ALVIN_RS09090
uniprot id: D3RU97
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS13010
gene id: 572477:ALVIN_RS13010
uniprot id: D3RPC6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the malate synthase family. GlcB subfamily.
messages: Cytoplasm
messages: Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

572477:ALVIN RS13920
gene id: 572477:ALVIN_RS13920
uniprot id: D3RQL4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the imidazoleglycerol-phosphate dehydratase family.
messages: Cytoplasm

572477:ALVIN RS12720
gene id: 572477:ALVIN_RS12720
uniprot id: O82947
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Binds 4 heme groups per subunit.
messages: Cellular chromatophore membrane
messages: Component of the photosynthetic reaction center composed of protein subunits L (PufL), M (PufM), H (PuhA) and cytochrome C (PufC). The reaction center interacts with light-harvesting antenna complex LH1.
messages: The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.

572477:ALVIN RS00630
gene id: 572477:ALVIN_RS00630
uniprot id: D3RVG7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MraZ family.
messages: Forms oligomers.
messages: nucleoid

572477:ALVIN RS14240
gene id: 572477:ALVIN_RS14240
uniprot id: D3RQS8
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
messages: Belongs to the amidase family. GatA subfamily.
messages: Heterotrimer of A, B and C subunits.

572477:ALVIN RS13520
gene id: 572477:ALVIN_RS13520
uniprot id: D3RQ06
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IMPDH/GMPR family.
messages: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH.

572477:ALVIN RS02470
gene id: 572477:ALVIN_RS02470
uniprot id: D3RNU2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
messages: Cytoplasm
messages: In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.

572477:ALVIN RS09275
gene id: 572477:ALVIN_RS09275
uniprot id: D3RUD0
names: Cofactor
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.

572477:ALVIN RS12390
gene id: 572477:ALVIN_RS12390
uniprot id: D3RNM8
names: Cofactor
messages: Binds 2 Mg(2+) ions per monomer.

572477:ALVIN RS01230
gene id: 572477:ALVIN_RS01230
uniprot id: D3RMF1
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS09135
gene id: 572477:ALVIN_RS09135
uniprot id: D3RUA6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS21 family.

572477:ALVIN RS12735
gene id: 572477:ALVIN_RS12735
uniprot id: D3RP74
names: Function
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.

572477:ALVIN RS09935
gene id: 572477:ALVIN_RS09935
uniprot id: D3RUR5
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

572477:ALVIN RS11695
gene id: 572477:ALVIN_RS11695
uniprot id: D3RMX6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

572477:ALVIN RS00470
gene id: 572477:ALVIN_RS00470
uniprot id: D3RVE0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
messages: Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
messages: Homotetramer; dimer of dimers.
messages: Involved in the catabolism of short chain fatty acids (SCFA) via the 2-methylcitrate cycle (propionate degradation route). Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate via an alpha-carboxy-carbanion intermediate.

572477:ALVIN RS11355
gene id: 572477:ALVIN_RS11355
uniprot id: D3RMQ9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

572477:ALVIN RS06585
gene id: 572477:ALVIN_RS06585
uniprot id: D3RSW2
names: Caution
names: Function
names: Similarity
messages: Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
messages: DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS04885
gene id: 572477:ALVIN_RS04885
uniprot id: D3RRM3
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

572477:ALVIN RS12100
gene id: 572477:ALVIN_RS12100
uniprot id: D3RNH1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the complex I 75 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Composed of 13 different subunits. Subunits NuoCD, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS11795
gene id: 572477:ALVIN_RS11795
uniprot id: D3RMZ6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

572477:ALVIN RS14605
gene id: 572477:ALVIN_RS14605
uniprot id: D3RRC0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliQ/MopD/SpaQ family.
messages: Cell membrane
messages: Membrane
messages: Role in flagellar biosynthesis.

572477:ALVIN RS04720
gene id: 572477:ALVIN_RS04720
uniprot id: D3RR67
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ExbB/TolQ family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
messages: The Tol-Pal system is composed of five core proteins: the inner membrane proteins TolA, TolQ and TolR, the periplasmic protein TolB and the outer membrane protein Pal. They form a network linking the inner and outer membranes and the peptidoglycan layer.

572477:ALVIN RS11490
gene id: 572477:ALVIN_RS11490
uniprot id: D3RMT5
names: Similarity
messages: Belongs to the peptidase A31 family.

572477:ALVIN RS02815
gene id: 572477:ALVIN_RS02815
uniprot id: D3RP07
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: Membrane

572477:ALVIN RS11570
gene id: 572477:ALVIN_RS11570
uniprot id: D3RMV1
names: Similarity
messages: Belongs to the GSP E family.

572477:ALVIN RS09380
gene id: 572477:ALVIN_RS09380
uniprot id: D3RUF1
names: Function
names: Similarity
messages: Belongs to the thymidylate kinase family.
messages: Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.

572477:ALVIN RS05935
gene id: 572477:ALVIN_RS05935
uniprot id: D3RSI2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Mrp/NBP35 ATP-binding proteins family.
messages: Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP.
messages: Homodimer.
messages: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family.
messages: In the N-terminal section; belongs to the MIP18 family.

572477:ALVIN RS09580
gene id: 572477:ALVIN_RS09580
uniprot id: D3RUJ1
names: Function
names: Similarity
messages: Belongs to the MoaB/Mog family.
messages: May be involved in the biosynthesis of molybdopterin.

572477:ALVIN RS04030
gene id: 572477:ALVIN_RS04030
uniprot id: D3RQF4
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PdxA family.
messages: Binds 1 divalent metal cation per subunit. Can use ions such as Zn(2+), Mg(2+) or Co(2+).
messages: Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
messages: Cytoplasm
messages: Homodimer.
messages: The active site is located at the dimer interface.

572477:ALVIN RS06985
gene id: 572477:ALVIN_RS06985
uniprot id: D3RT41
names: Similarity
messages: Belongs to the phosphohexose mutase family.

572477:ALVIN RS07525
gene id: 572477:ALVIN_RS07525
uniprot id: D3RTE6
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS02190
gene id: 572477:ALVIN_RS02190
uniprot id: D3RNB5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

572477:ALVIN RS02840
gene id: 572477:ALVIN_RS02840
uniprot id: D3RP12
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS08600
gene id: 572477:ALVIN_RS08600
uniprot id: D3RU07
names: Similarity
messages: Belongs to the pterin-4-alpha-carbinolamine dehydratase family.

572477:ALVIN RS14470
gene id: 572477:ALVIN_RS14470
uniprot id: D3RQX2
names: Similarity
messages: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.

572477:ALVIN RS09910
gene id: 572477:ALVIN_RS09910
uniprot id: D3RUR0
names: Function
names: Similarity
messages: Belongs to the helicase family. DnaB subfamily.
messages: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins.

572477:ALVIN RS07975
gene id: 572477:ALVIN_RS07975
uniprot id: D3RTN3
names: Function
names: Similarity
messages: Belongs to the acyltransferase CrtO family.
messages: Catalyzes the acylation of glycosyl-4,4'-diaponeurosporenoate, i.e. the esterification of glucose at the C6'' position with the carboxyl group of the C(15) fatty acid 12-methyltetradecanoic acid, to yield staphyloxanthin. This is the last step in the biosynthesis of this orange pigment, present in most staphylococci strains.

572477:ALVIN RS09980
gene id: 572477:ALVIN_RS09980
uniprot id: D3RV01
names: Function
names: Similarity
messages: Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PSRP subfamily.
messages: Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.

572477:ALVIN RS11190
gene id: 572477:ALVIN_RS11190
uniprot id: D3RW01
names: Similarity
messages: Belongs to the UPF0751 family.

572477:ALVIN RS10745
gene id: 572477:ALVIN_RS10745
uniprot id: D3RVR6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.

572477:ALVIN RS00750
gene id: 572477:ALVIN_RS00750
uniprot id: D3RVJ1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ApbE family.
messages: Cell inner membrane
messages: Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
messages: Magnesium. Can also use manganese.

572477:ALVIN RS15455
gene id: 572477:ALVIN_RS15455
uniprot id: D3RS63
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

572477:ALVIN RS03665
gene id: 572477:ALVIN_RS03665
uniprot id: D3RQ82
names: Similarity
messages: Belongs to the UPF0051 (ycf24) family.

572477:ALVIN RS08565
gene id: 572477:ALVIN_RS08565
uniprot id: D3RU02
names: Similarity
messages: Belongs to the histone deacetylase family.

572477:ALVIN RS14130
gene id: 572477:ALVIN_RS14130
uniprot id: D3RQQ6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the histidinol dehydrogenase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.

572477:ALVIN RS00110
gene id: 572477:ALVIN_RS00110
uniprot id: D3RUU4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HupC/HyaC/HydC family.
messages: Membrane

572477:ALVIN RS12560
gene id: 572477:ALVIN_RS12560
uniprot id: D3RP36
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS11645
gene id: 572477:ALVIN_RS11645
uniprot id: D3RMW5
names: Similarity
messages: Belongs to the SAM hydrolase / SAM-dependent halogenase family.

572477:ALVIN RS16275
gene id: 572477:ALVIN_RS16275
uniprot id: D3RWF6
names: Similarity
messages: Belongs to the CbbQ/NirQ/NorQ/GpvN family.

572477:ALVIN RS01465
gene id: 572477:ALVIN_RS01465
uniprot id: D3RMJ7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).

572477:ALVIN RS15520
gene id: 572477:ALVIN_RS15520
uniprot id: D3RS76
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS04585
gene id: 572477:ALVIN_RS04585
uniprot id: D3RR41
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Cell inner membrane
messages: Homoheptamer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.
messages: Membrane

572477:ALVIN RS03580
gene id: 572477:ALVIN_RS03580
uniprot id: D3RPT9
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS08385
gene id: 572477:ALVIN_RS08385
uniprot id: D3RTW5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane

572477:ALVIN RS10865
gene id: 572477:ALVIN_RS10865
uniprot id: Q46476
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. DsbE subfamily.
messages: Cell inner membrane
messages: Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme lyase (By similarity).

572477:ALVIN RS00705
gene id: 572477:ALVIN_RS00705
uniprot id: D3RVI2
names: Function
names: Similarity
messages: Belongs to the LpxC family.
messages: Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.

572477:ALVIN RS07065
gene id: 572477:ALVIN_RS07065
uniprot id: D3RT55
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.

572477:ALVIN RS02405
gene id: 572477:ALVIN_RS02405
uniprot id: D3RNT0
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS03815
gene id: 572477:ALVIN_RS03815
uniprot id: D3RQB1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type II topoisomerase GyrB family.
messages: Belongs to the type II topoisomerase family. ParE type 1 subfamily.
messages: Heterotetramer composed of ParC and ParE.
messages: Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule.

572477:ALVIN RS04325
gene id: 572477:ALVIN_RS04325
uniprot id: D3RQZ1
names: Similarity
messages: Belongs to the bacterial solute-binding protein ModA family.

572477:ALVIN RS05620
gene id: 572477:ALVIN_RS05620
uniprot id: D3RSB6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
messages: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).

572477:ALVIN RS14385
gene id: 572477:ALVIN_RS14385
uniprot id: P00208
names: Cofactor
names: Function
messages: Binds 2 [4Fe-4S] clusters.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

572477:ALVIN RS14785
gene id: 572477:ALVIN_RS14785
uniprot id: D3RRF2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

572477:ALVIN RS06580
gene id: 572477:ALVIN_RS06580
uniprot id: D3RSW1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ZipA family.
messages: Cell inner membrane
messages: Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
messages: Interacts with FtsZ via their C-terminal domains.

572477:ALVIN RS05895
gene id: 572477:ALVIN_RS05895
uniprot id: D3RSH2
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS12745
gene id: 572477:ALVIN_RS12745
uniprot id: D3RP76
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ChlB/BchB/BchZ family.
messages: Chlorophyllide reductase is composed of three subunits; BchX, BchY and BchZ. Forms a heterodimer of one BchY and one BchZ subunit.
messages: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole.

572477:ALVIN RS13550
gene id: 572477:ALVIN_RS13550
uniprot id: D3RQ12
names: Function
names: Similarity
messages: Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.
messages: Belongs to the glycogen phosphorylase family.
messages: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.

572477:ALVIN RS00810
gene id: 572477:ALVIN_RS00810
uniprot id: D3RVK3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A24 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: Plays an essential role in type IV pili and type II pseudopili formation by proteolytically removing the leader sequence from substrate proteins and subsequently monomethylating the alpha-amino group of the newly exposed N-terminal phenylalanine.

572477:ALVIN RS14290
gene id: 572477:ALVIN_RS14290
uniprot id: D3RQT8
names: Similarity
messages: Belongs to the UPF0250 family.

572477:ALVIN RS06070
gene id: 572477:ALVIN_RS06070
uniprot id: D3RSK9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily.
messages: Cytoplasm
messages: Heteromultimer composed of HisG and HisZ subunits.
messages: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
messages: This function is generally fulfilled by the C-terminal part of HisG, which is missing in some bacteria such as this one.

572477:ALVIN RS05865
gene id: 572477:ALVIN_RS05865
uniprot id: D3RSG6
names: Function
names: Similarity
messages: Belongs to the PINc/VapC protein family.
messages: Toxic component of a toxin-antitoxin (TA) system. An RNase.

572477:ALVIN RS13995
gene id: 572477:ALVIN_RS13995
uniprot id: D3RQM9
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS03495
gene id: 572477:ALVIN_RS03495
uniprot id: D3RPS2
names: Function
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.

572477:ALVIN RS00850
gene id: 572477:ALVIN_RS00850
uniprot id: D3RVL1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the anthranilate phosphoribosyltransferase family.
messages: Binds 2 magnesium ions per monomer.
messages: Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS12875
gene id: 572477:ALVIN_RS12875
uniprot id: D3RP99
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS14080
gene id: 572477:ALVIN_RS14080
uniprot id: D3RQP6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS04715
gene id: 572477:ALVIN_RS04715
uniprot id: D3RR66
names: Similarity
messages: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family.

572477:ALVIN RS11535
gene id: 572477:ALVIN_RS11535
uniprot id: D3RMU4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial solute-binding protein 7 family.
messages: Homodimer.
messages: Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
messages: Periplasm

572477:ALVIN RS02605
gene id: 572477:ALVIN_RS02605
uniprot id: D3RNW9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dethiobiotin synthetase family.
messages: Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS00235
gene id: 572477:ALVIN_RS00235
uniprot id: D3RUX0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase epsilon chain family.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

572477:ALVIN RS11825
gene id: 572477:ALVIN_RS11825
uniprot id: D3RN02
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

572477:ALVIN RS12055
gene id: 572477:ALVIN_RS12055
uniprot id: D3RNG2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell inner membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS02835
gene id: 572477:ALVIN_RS02835
uniprot id: D3RP11
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS18160
gene id: 572477:ALVIN_RS18160
uniprot id: D3RTP6
names: Similarity
messages: Belongs to the YkuD family.

572477:ALVIN RS10270
gene id: 572477:ALVIN_RS10270
uniprot id: D3RV51
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-I family.

572477:ALVIN RS04550
gene id: 572477:ALVIN_RS04550
uniprot id: D3RR34
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm

572477:ALVIN RS04155
gene id: 572477:ALVIN_RS04155
uniprot id: D3RQI0
names: Function
names: Similarity
messages: Belongs to the PEP-utilizing enzyme family.
messages: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate.

572477:ALVIN RS08915
gene id: 572477:ALVIN_RS08915
uniprot id: D3RU62
names: Similarity
messages: Belongs to the DegT/DnrJ/EryC1 family.

572477:ALVIN RS06550
gene id: 572477:ALVIN_RS06550
uniprot id: D3RSV5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TamA family.
messages: Cell outer membrane
messages: Membrane

572477:ALVIN RS08060
gene id: 572477:ALVIN_RS08060
uniprot id: D3RTQ0
names: Similarity
messages: Belongs to the glycosyl hydrolase 13 family.

572477:ALVIN RS02830
gene id: 572477:ALVIN_RS02830
uniprot id: D3RP10
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell inner membrane
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS14855
gene id: 572477:ALVIN_RS14855
uniprot id: D3RRG7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.
messages: ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
messages: Belongs to the ClpX chaperone family. HslU subfamily.
messages: Cytoplasm

572477:ALVIN RS02845
gene id: 572477:ALVIN_RS02845
uniprot id: D3RP13
names: Similarity
messages: Belongs to the universal stress protein A family.

572477:ALVIN RS02810
gene id: 572477:ALVIN_RS02810
uniprot id: D3RP06
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrB/RnfD family.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS05640
gene id: 572477:ALVIN_RS05640
uniprot id: D3RSC0
names: Similarity
messages: In the C-terminal section; belongs to the transposase 35 family.
messages: In the N-terminal section; belongs to the transposase 2 family.

572477:ALVIN RS07800
gene id: 572477:ALVIN_RS07800
uniprot id: D3RTK0
names: Function
messages: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.

572477:ALVIN RS09175
gene id: 572477:ALVIN_RS09175
uniprot id: D3RUB3
names: Function
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase large chain family.
messages: Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.

572477:ALVIN RS07925
gene id: 572477:ALVIN_RS07925
uniprot id: D3RTM3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).
messages: Belongs to the AccD/PCCB family.
messages: Binds 1 zinc ion per subunit.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
messages: Cytoplasm

572477:ALVIN RS10405
gene id: 572477:ALVIN_RS10405
uniprot id: D3RV77
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.
messages: Homodimer.
messages: Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.

572477:ALVIN RS07735
gene id: 572477:ALVIN_RS07735
uniprot id: D3RTI7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-3 integral membrane protein family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS02620
gene id: 572477:ALVIN_RS02620
uniprot id: D3RNX2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily.
messages: Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
messages: Homodimer.

572477:ALVIN RS09130
gene id: 572477:ALVIN_RS09130
uniprot id: D3RUA5
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KAE1 / TsaD family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction.

572477:ALVIN RS03870
gene id: 572477:ALVIN_RS03870
uniprot id: D3RQC2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoS subfamily.
messages: Cytoplasm
messages: Interacts with the RNA polymerase core enzyme.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.

572477:ALVIN RS08530
gene id: 572477:ALVIN_RS08530
uniprot id: D3RTZ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S1C family.
messages: Periplasm

572477:ALVIN RS01790
gene id: 572477:ALVIN_RS01790
uniprot id: D3RN37
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrB family.
messages: Cytoplasm
messages: Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.
messages: The beta-hairpin motif is involved in DNA binding.

572477:ALVIN RS01850
gene id: 572477:ALVIN_RS01850
uniprot id: D3RN48
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
messages: Cell inner membrane
messages: Involved in the import of queuosine (Q) precursors, required for Q precursor salvage.

572477:ALVIN RS14175
gene id: 572477:ALVIN_RS14175
uniprot id: D3RQR5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the KdsC family.
messages: Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate.
messages: Homotetramer.

572477:ALVIN RS02055
gene id: 572477:ALVIN_RS02055
uniprot id: D3RN88
names: Function
names: Similarity
messages: Belongs to the MinE family.
messages: Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.

572477:ALVIN RS01965
gene id: 572477:ALVIN_RS01965
uniprot id: D3RN70
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruD family.
messages: Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.

572477:ALVIN RS05820
gene id: 572477:ALVIN_RS05820
uniprot id: D3RSF7
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS07885
gene id: 572477:ALVIN_RS07885
uniprot id: D3RTL6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: In the N-terminal section; belongs to the FGAMS family.
messages: Monomer.
messages: Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.

572477:ALVIN RS14680
gene id: 572477:ALVIN_RS14680
uniprot id: D3RRD3
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliE family.

572477:ALVIN RS05840
gene id: 572477:ALVIN_RS05840
uniprot id: D3RSG2
names: Function
names: Similarity
messages: Belongs to the Mg-chelatase subunits D/I family.
messages: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.

572477:ALVIN RS07285
gene id: 572477:ALVIN_RS07285
uniprot id: D3RTA0
names: Similarity
messages: Belongs to the heat shock protein 70 family.

572477:ALVIN RS09300
gene id: 572477:ALVIN_RS09300
uniprot id: D3RUD5
names: Similarity
messages: Belongs to the peptidase A31 family.

572477:ALVIN RS13770
gene id: 572477:ALVIN_RS13770
uniprot id: D3RQ55
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PanB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.
messages: Cytoplasm
messages: Homodecamer; pentamer of dimers.

572477:ALVIN RS13980
gene id: 572477:ALVIN_RS13980
uniprot id: D3RQM6
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS14300
gene id: 572477:ALVIN_RS14300
uniprot id: D3RQU0
names: Function
names: Similarity
messages: Belongs to the CowN family.
messages: Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.

572477:ALVIN RS06680
gene id: 572477:ALVIN_RS06680
uniprot id: D3RSY1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the V-ATPase 116 kDa subunit family.
messages: Membrane

572477:ALVIN RS07965
gene id: 572477:ALVIN_RS07965
uniprot id: D3RTN1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LeuD family. LeuD type 1 subfamily.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
messages: Heterodimer of LeuC and LeuD.

572477:ALVIN RS04040
gene id: 572477:ALVIN_RS04040
uniprot id: D3RQF6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LptD family.
messages: Cell outer membrane
messages: Component of the lipopolysaccharide transport and assembly complex. Interacts with LptE and LptA.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.

572477:ALVIN RS04565
gene id: 572477:ALVIN_RS04565
uniprot id: D3RR37
names: Similarity
messages: Belongs to the mannose-6-phosphate isomerase type 2 family.

572477:ALVIN RS03170
gene id: 572477:ALVIN_RS03170
uniprot id: D3RPK6
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS11675
gene id: 572477:ALVIN_RS11675
uniprot id: D3RMX2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecY/SEC61-alpha family.
messages: Cell inner membrane
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Membrane
messages: The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.

572477:ALVIN RS13515
gene id: 572477:ALVIN_RS13515
uniprot id: D3RQ05
names: Function
names: Subunit
messages: Catalyzes the synthesis of GMP from XMP.
messages: Homodimer.

572477:ALVIN RS11835
gene id: 572477:ALVIN_RS11835
uniprot id: D3RN04
names: Function
names: Similarity
messages: Belongs to the NusG family.
messages: Participates in transcription elongation, termination and antitermination.

572477:ALVIN RS11685
gene id: 572477:ALVIN_RS11685
uniprot id: D3RMX4
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL30 family.
messages: Part of the 50S ribosomal subunit.

572477:ALVIN RS02855
gene id: 572477:ALVIN_RS02855
uniprot id: D3RP15
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. MoaA family.
messages: Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.
messages: Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer and homodimer.

572477:ALVIN RS00525
gene id: 572477:ALVIN_RS00525
uniprot id: D3RVF1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
messages: Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.
messages: Cytoplasm

572477:ALVIN RS00390
gene id: 572477:ALVIN_RS00390
uniprot id: D3RVC4
names: Similarity
messages: Belongs to the aconitase/IPM isomerase family.

572477:ALVIN RS09100
gene id: 572477:ALVIN_RS09100
uniprot id: D3RU99
names: Function
names: Similarity
messages: Belongs to the DHNA family.
messages: Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin.

572477:ALVIN RS16475
gene id: 572477:ALVIN_RS16475
uniprot id: D3RPM8
names: Function
names: Similarity
messages: Belongs to the FlgM family.
messages: Responsible for the coupling of flagellin expression to flagellar assembly by preventing expression of the flagellin genes when a component of the middle class of proteins is defective. It negatively regulates flagellar genes by inhibiting the activity of FliA by directly binding to FliA.

572477:ALVIN RS08220
gene id: 572477:ALVIN_RS08220
uniprot id: D3RTT2
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase small chain family.

572477:ALVIN RS00995
gene id: 572477:ALVIN_RS00995
uniprot id: D3RVN8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ApbE family.
messages: Cell inner membrane
messages: Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.

572477:ALVIN RS12525
gene id: 572477:ALVIN_RS12525
uniprot id: D3RNQ5
names: Cofactor
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.

572477:ALVIN RS10230
gene id: 572477:ALVIN_RS10230
uniprot id: D3RV44
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
messages: Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
messages: Homotrimer.

572477:ALVIN RS00165
gene id: 572477:ALVIN_RS00165
uniprot id: D3RUV6
names: Similarity
messages: Belongs to the glutamate synthase family.

572477:ALVIN RS01945
gene id: 572477:ALVIN_RS01945
uniprot id: D3RN66
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the enolase family.
messages: Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
messages: Cell surface
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.
messages: Cytoplasm
messages: Secreted
messages: The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.

572477:ALVIN RS11070
gene id: 572477:ALVIN_RS11070
uniprot id: D3RVX7
names: Similarity
messages: Belongs to the ClpA/ClpB family.

572477:ALVIN RS11750
gene id: 572477:ALVIN_RS11750
uniprot id: D3RMY7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.

572477:ALVIN RS04180
gene id: 572477:ALVIN_RS04180
uniprot id: D3RQI5
names: Similarity
messages: Belongs to the glycosyl hydrolase 31 family.

572477:ALVIN RS10035
gene id: 572477:ALVIN_RS10035
uniprot id: D3RV11
names: Function
names: Similarity
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.

572477:ALVIN RS12285
gene id: 572477:ALVIN_RS12285
uniprot id: D3RNK7
names: Similarity
messages: Belongs to the tRNA methyltransferase O family.

572477:ALVIN RS00345
gene id: 572477:ALVIN_RS00345
uniprot id: O31215
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family.
messages: Binds 2 heme b groups non-covalently.
messages: Cell membrane
messages: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
messages: Heme 1 (or BL or b562) is low-potential and absorbs at about 562 nm, and heme 2 (or BH or b566) is high-potential and absorbs at about 566 nm.
messages: The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.

572477:ALVIN RS08510
gene id: 572477:ALVIN_RS08510
uniprot id: D3RTZ1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribonuclease III family.
messages: Cytoplasm
messages: Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
messages: Homodimer.

572477:ALVIN RS14555
gene id: 572477:ALVIN_RS14555
uniprot id: D3RRB0
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CheB family.
messages: Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.
messages: Cytoplasm
messages: Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
messages: Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.

572477:ALVIN RS07970
gene id: 572477:ALVIN_RS07970
uniprot id: D3RTN2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
messages: Heterodimer of LeuC and LeuD.

572477:ALVIN RS15195
gene id: 572477:ALVIN_RS15195
uniprot id: D3RS09
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. DeaD/CsdA subfamily.
messages: Cytoplasm
messages: DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.

572477:ALVIN RS09550
gene id: 572477:ALVIN_RS09550
uniprot id: D3RUI5
names: Function
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

572477:ALVIN RS11690
gene id: 572477:ALVIN_RS11690
uniprot id: D3RMX5
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS5 family.
messages: Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.
messages: Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.
messages: The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S4 and S12 plays an important role in translational accuracy.

572477:ALVIN RS06730
gene id: 572477:ALVIN_RS06730
uniprot id: P22849
names: Caution
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the RuBisCO large chain family. Type I subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Expressed when grown photoautotrophically (at protein level).
messages: Heterohexadecamer of 8 large chains and 8 small chains.
messages: In C.vinosum two similar set of genes code for RuBisCO large and small chains: the RbcL-RbcS and the RbcA-RbcB pair (this entry). Under standard photoautotrophic culture conditions only the latter pair seems active, the former probably being cryptic.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.

572477:ALVIN RS11620
gene id: 572477:ALVIN_RS11620
uniprot id: D3RMW1
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the argininosuccinate synthase family. Type 1 subfamily.
messages: Cytoplasm
messages: Homotetramer.

572477:ALVIN RS13035
gene id: 572477:ALVIN_RS13035
uniprot id: D3RPD1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the aerobic coproporphyrinogen-III oxidase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.

572477:ALVIN RS03595
gene id: 572477:ALVIN_RS03595
uniprot id: D3RQ69
names: Similarity
messages: Belongs to the low molecular weight phosphotyrosine protein phosphatase family.

572477:ALVIN RS03490
gene id: 572477:ALVIN_RS03490
uniprot id: D3RPS1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS10140
gene id: 572477:ALVIN_RS10140
uniprot id: D3RV26
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
messages: Cell membrane
messages: Heterodimer of a large and a small subunit.

572477:ALVIN RS00725
gene id: 572477:ALVIN_RS00725
uniprot id: D3RVI6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ArgJ family.
messages: Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate.
messages: Cytoplasm
messages: Heterotetramer of two alpha and two beta chains.
messages: Some bacteria possess a monofunctional ArgJ, i.e., capable of catalyzing only the fifth step of the arginine biosynthetic pathway.

572477:ALVIN RS10370
gene id: 572477:ALVIN_RS10370
uniprot id: D3RV70
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TrkH potassium transport family.
messages: Cell inner membrane
messages: Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA.
messages: Membrane

572477:ALVIN RS08170
gene id: 572477:ALVIN_RS08170
uniprot id: D3RTS2
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dCTP deaminase family.
messages: Catalyzes the deamination of dCTP to dUTP.
messages: Homotrimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS06575
gene id: 572477:ALVIN_RS06575
uniprot id: D3RSW0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SMC family.
messages: Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.
messages: Cytoplasm
messages: Homodimer.
messages: Required for chromosome condensation and partitioning.

572477:ALVIN RS17965
gene id: 572477:ALVIN_RS17965
uniprot id: D3RT36
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

572477:ALVIN RS13085
gene id: 572477:ALVIN_RS13085
uniprot id: D3RPE0
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS11670
gene id: 572477:ALVIN_RS11670
uniprot id: D3RMX0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

572477:ALVIN RS10695
gene id: 572477:ALVIN_RS10695
uniprot id: D3RVQ5
names: Function
names: Similarity
messages: Belongs to the NadD family.
messages: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).

572477:ALVIN RS04220
gene id: 572477:ALVIN_RS04220
uniprot id: D3RQJ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane

572477:ALVIN RS16510
gene id: 572477:ALVIN_RS16510
uniprot id: D3RPU1
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS06090
gene id: 572477:ALVIN_RS06090
uniprot id: D3RSL3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
messages: Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only aminotransferase known to utilize SAM as an amino donor.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS10700
gene id: 572477:ALVIN_RS10700
uniprot id: D3RVQ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Iojap/RsfS family.
messages: Cytoplasm
messages: Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
messages: Interacts with ribosomal protein L14 (rplN).

572477:ALVIN RS11410
gene id: 572477:ALVIN_RS11410
uniprot id: D3RMS0
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

572477:ALVIN RS00675
gene id: 572477:ALVIN_RS00675
uniprot id: D3RVH6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family.
messages: Cell wall formation.
messages: Cytoplasm

572477:ALVIN RS08525
gene id: 572477:ALVIN_RS08525
uniprot id: D3RTZ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
messages: Cell inner membrane
messages: Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.

572477:ALVIN RS02060
gene id: 572477:ALVIN_RS02060
uniprot id: D3RN89
names: Function
names: Similarity
names: Subunit
messages: ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.
messages: Belongs to the ParA family. MinD subfamily.
messages: Interacts with MinC and FtsZ.

572477:ALVIN RS10850
gene id: 572477:ALVIN_RS10850
uniprot id: D3RVT5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmD/CycX/HelD family.
messages: Cell inner membrane
messages: Membrane
messages: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.

572477:ALVIN RS12095
gene id: 572477:ALVIN_RS12095
uniprot id: D3RNH0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell inner membrane
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

572477:ALVIN RS07545
gene id: 572477:ALVIN_RS07545
uniprot id: D3RTF0
names: Similarity
messages: Belongs to the FeoA family.

572477:ALVIN RS13115
gene id: 572477:ALVIN_RS13115
uniprot id: D3RPE6
names: Function
names: Similarity
messages: Belongs to the phenylacetyl-CoA ligase family.
messages: Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).

572477:ALVIN RS06530
gene id: 572477:ALVIN_RS06530
uniprot id: D3RSV1
names: Cofactor
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.

572477:ALVIN RS10260
gene id: 572477:ALVIN_RS10260
uniprot id: D3RV49
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.
messages: Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS10840
gene id: 572477:ALVIN_RS10840
uniprot id: D3RVT3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmB/CycW/HelB family.
messages: Cell inner membrane
messages: Membrane
messages: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.

572477:ALVIN RS04265
gene id: 572477:ALVIN_RS04265
uniprot id: D3RQX9
names: Similarity
messages: Belongs to the inositol monophosphatase superfamily.

572477:ALVIN RS01580
gene id: 572477:ALVIN_RS01580
uniprot id: D3RMM0
names: Similarity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.

572477:ALVIN RS11805
gene id: 572477:ALVIN_RS11805
uniprot id: D3RMZ8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

572477:ALVIN RS14895
gene id: 572477:ALVIN_RS14895
uniprot id: D3RRH5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PEPCase type 1 family.
messages: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
messages: Homotetramer.

572477:ALVIN RS12810
gene id: 572477:ALVIN_RS12810
uniprot id: D3RP90
names: Similarity
messages: Belongs to the carotenoid/retinoid oxidoreductase family.

572477:ALVIN RS15490
gene id: 572477:ALVIN_RS15490
uniprot id: D3RS70
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Membrane

572477:ALVIN RS14465
gene id: 572477:ALVIN_RS14465
uniprot id: D3RQX1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ribose 5-phosphate isomerase family.
messages: Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
messages: Homodimer.

572477:ALVIN RS09230
gene id: 572477:ALVIN_RS09230
uniprot id: D3RUC2
names: Function
names: Similarity
messages: Belongs to the Fe(2+)-trafficking protein family.
messages: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.

572477:ALVIN RS12250
gene id: 572477:ALVIN_RS12250
uniprot id: D3RNK0
names: Cofactor
names: Function
messages: Binds 4 [4Fe-4S] clusters per subunit.
messages: The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.

572477:ALVIN RS11775
gene id: 572477:ALVIN_RS11775
uniprot id: D3RMZ2
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL3 family.
messages: Methylated by PrmB.
messages: One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.

572477:ALVIN RS04805
gene id: 572477:ALVIN_RS04805
uniprot id: D3RR84
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: By heat shock.
messages: Cytoplasm
messages: Homohexamer. Organized in a ring with a central cavity.

572477:ALVIN RS00270
gene id: 572477:ALVIN_RS00270
uniprot id: D3RUX7
names: Similarity
messages: Belongs to the SIMIBI class G3E GTPase family. HypB/HupM subfamily.

572477:ALVIN RS12510
gene id: 572477:ALVIN_RS12510
uniprot id: D3RNQ2
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the Nth/MutY family.
messages: Binds 1 [4Fe-4S] cluster.
messages: DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate.

572477:ALVIN RS11840
gene id: 572477:ALVIN_RS11840
uniprot id: D3RN05
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS10740
gene id: 572477:ALVIN_RS10740
uniprot id: D3RVR5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

572477:ALVIN RS03080
gene id: 572477:ALVIN_RS03080
uniprot id: D3RPI8
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS10665
gene id: 572477:ALVIN_RS10665
uniprot id: D3RVP9
names: Similarity
messages: Belongs to the UDP-N-acetylglucosamine 2-epimerase family.

572477:ALVIN RS13095
gene id: 572477:ALVIN_RS13095
uniprot id: D3RPE2
names: Cofactor
names: Function
names: Subunit
messages: Binds 2 [4Fe-4S] clusters. In this family the first cluster has a non-standard and varying [4Fe-4S] binding motif CX(2)CX(2)CX(4-5)CP.
messages: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
messages: Heterodimer of the IorA and IorB subunits.

572477:ALVIN RS15440
gene id: 572477:ALVIN_RS15440
uniprot id: D3RS60
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA.
messages: Belongs to the helicase family. UvrD subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding. Interacts with RecA.
messages: The C-terminal domain has nuclease activity and interacts with RecD. It interacts with RecA, facilitating its loading onto ssDNA.
messages: The N-terminal DNA-binding domain is a ssDNA-dependent ATPase and has ATP-dependent 3'-5' helicase function. This domain interacts with RecC.

572477:ALVIN RS03605
gene id: 572477:ALVIN_RS03605
uniprot id: D3RQ71
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

572477:ALVIN RS00955
gene id: 572477:ALVIN_RS00955
uniprot id: D3RVN0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0382 family.
messages: Membrane

572477:ALVIN RS09870
gene id: 572477:ALVIN_RS09870
uniprot id: D3RUQ1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS04845
gene id: 572477:ALVIN_RS04845
uniprot id: D3RR92
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS11640
gene id: 572477:ALVIN_RS11640
uniprot id: D3RMW4
names: Similarity
messages: Belongs to the DEAD box helicase family.

572477:ALVIN RS00070
gene id: 572477:ALVIN_RS00070
uniprot id: D3RUT6
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

572477:ALVIN RS13725
gene id: 572477:ALVIN_RS13725
uniprot id: D3RQ46
names: Similarity
messages: Belongs to the CsoS2 family.

572477:ALVIN RS02900
gene id: 572477:ALVIN_RS02900
uniprot id: D3RP25
names: Similarity
messages: Belongs to the phD/YefM antitoxin family.

572477:ALVIN RS11710
gene id: 572477:ALVIN_RS11710
uniprot id: D3RMX9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

572477:ALVIN RS06190
gene id: 572477:ALVIN_RS06190
uniprot id: O87896
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DsrE/TusD family.
messages: Cytoplasm
messages: Not known. Could be involved in the oxidation of intracellular sulfur.

572477:ALVIN RS15540
gene id: 572477:ALVIN_RS15540
uniprot id: D3RS80
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
messages: Cell inner membrane
messages: Membrane
messages: Probable transporter of a GTP-driven Fe(2+) uptake system.

572477:ALVIN RS00540
gene id: 572477:ALVIN_RS00540
uniprot id: D3RVF4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
messages: Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS00665
gene id: 572477:ALVIN_RS00665
uniprot id: D3RVH4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEDS family. FtsW subfamily.
messages: Cell inner membrane
messages: Peptidoglycan polymerase that is essential for cell division.

572477:ALVIN RS05460
gene id: 572477:ALVIN_RS05460
uniprot id: D3RRY7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).
messages: Belongs to the CsrA/RsmA family.
messages: Cytoplasm
messages: Homodimer; the beta-strands of each monomer intercalate to form a hydrophobic core, while the alpha-helices form wings that extend away from the core.

572477:ALVIN RS07680
gene id: 572477:ALVIN_RS07680
uniprot id: D3RTH6
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the BPG-independent phosphoglycerate mutase family.
messages: Binds 2 manganese ions per subunit.
messages: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
messages: Monomer.

572477:ALVIN RS12075
gene id: 572477:ALVIN_RS12075
uniprot id: D3RNG6
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS00925
gene id: 572477:ALVIN_RS00925
uniprot id: D3RVM4
names: Similarity
messages: Belongs to the 5'-nucleotidase family.

572477:ALVIN RS06300
gene id: 572477:ALVIN_RS06300
uniprot id: D3RSQ5
names: Similarity
messages: Belongs to the YfgM family.

572477:ALVIN RS01570
gene id: 572477:ALVIN_RS01570
uniprot id: D3RML8
names: Similarity
messages: Belongs to the pyruvate kinase family.

572477:ALVIN RS09575
gene id: 572477:ALVIN_RS09575
uniprot id: D3RUJ0
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IlvD/Edd family.
messages: Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.
messages: Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS09150
gene id: 572477:ALVIN_RS09150
uniprot id: D3RUA9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoD/SigA subfamily.
messages: Cytoplasm
messages: Interacts transiently with the RNA polymerase catalytic core.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.

572477:ALVIN RS11885
gene id: 572477:ALVIN_RS11885
uniprot id: D3RN10
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.
messages: This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.

572477:ALVIN RS04520
gene id: 572477:ALVIN_RS04520
uniprot id: D3RR28
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvP family. C-terminal subunit subfamily.
messages: The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits.

572477:ALVIN RS10705
gene id: 572477:ALVIN_RS10705
uniprot id: D3RVQ7
names: Function
names: Similarity
messages: Belongs to the dihydrofolate reductase family.
messages: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.

572477:ALVIN RS03300
gene id: 572477:ALVIN_RS03300
uniprot id: D3RPN2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of a number of rings mounted on a central rod.

572477:ALVIN RS11400
gene id: 572477:ALVIN_RS11400
uniprot id: D3RMR8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the OMP decarboxylase family. Type 1 subfamily.
messages: Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).
messages: Homodimer.

572477:ALVIN RS11210
gene id: 572477:ALVIN_RS11210
uniprot id: D3RW05
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

572477:ALVIN RS10735
gene id: 572477:ALVIN_RS10735
uniprot id: D3RVR4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS13810
gene id: 572477:ALVIN_RS13810
uniprot id: P00154
names: Function
names: PTM
names: Subunit
messages: Binds 1 heme c group covalently per subunit.
messages: Cytochrome c' is the most widely occurring bacterial c-type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known.
messages: Homodimer.

572477:ALVIN RS03855
gene id: 572477:ALVIN_RS03855
uniprot id: D3RQB9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SurE nucleotidase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Cytoplasm
messages: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.

572477:ALVIN RS13065
gene id: 572477:ALVIN_RS13065
uniprot id: D3RPD7
names: Similarity
messages: Belongs to the GSP E family.

572477:ALVIN RS14845
gene id: 572477:ALVIN_RS14845
uniprot id: D3RRG5
names: Caution
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).

572477:ALVIN RS16135
gene id: 572477:ALVIN_RS16135
uniprot id: D3RWC5
names: Similarity
messages: Belongs to the DprA/Smf family.

572477:ALVIN RS09095
gene id: 572477:ALVIN_RS09095
uniprot id: D3RU98
names: Subcellular Location Annotation
messages: Mitochondrion

572477:ALVIN RS14940
gene id: 572477:ALVIN_RS14940
uniprot id: D3RRI4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetylglutamate kinase family. ArgB subfamily.
messages: Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.
messages: Cytoplasm

572477:ALVIN RS02465
gene id: 572477:ALVIN_RS02465
uniprot id: D3RNU1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
messages: Cytoplasm
messages: Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP.

572477:ALVIN RS02485
gene id: 572477:ALVIN_RS02485
uniprot id: D3RNU5
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Although this enzyme belongs to the family of MTA phosphorylases based on sequence homology, it has been shown that conserved amino acid substitutions in the substrate binding pocket convert the substrate specificity of this enzyme from 6-aminopurines to 6-oxopurines.
messages: Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
messages: Catalyzes the reversible phosphorylation of S-methyl-5'-thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.
messages: Homotrimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS05925
gene id: 572477:ALVIN_RS05925
uniprot id: D3RSI0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the YajC family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the SecDF-YidC-YajC translocase complex. The SecDF-YidC-YajC translocase forms a supercomplex with SecYEG, called the holo-translocon (HTL).
messages: The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.

572477:ALVIN RS09760
gene id: 572477:ALVIN_RS09760
uniprot id: D3RUM8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b560 family.
messages: Membrane
messages: Membrane-anchoring subunit of succinate dehydrogenase (SDH).
messages: Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD. The complex can form homotrimers.
messages: The heme is bound between the two transmembrane subunits.

572477:ALVIN RS02435
gene id: 572477:ALVIN_RS02435
uniprot id: D3RNT5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family.
messages: Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
messages: Cell inner membrane

572477:ALVIN RS06665
gene id: 572477:ALVIN_RS06665
uniprot id: D3RSX8
names: Similarity
messages: Belongs to the V-ATPase E subunit family.

572477:ALVIN RS01615
gene id: 572477:ALVIN_RS01615
uniprot id: D3RMM7
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS11515
gene id: 572477:ALVIN_RS11515
uniprot id: D3RMU0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transaldolase family. Type 1 subfamily.
messages: Cytoplasm
messages: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.

572477:ALVIN RS07530
gene id: 572477:ALVIN_RS07530
uniprot id: D3RTE7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Membrane

572477:ALVIN RS07000
gene id: 572477:ALVIN_RS07000
uniprot id: D3RT44
names: Similarity
messages: Belongs to the thioredoxin family.

572477:ALVIN RS06925
gene id: 572477:ALVIN_RS06925
uniprot id: D3RT29
names: Function
names: Similarity
messages: Belongs to the nucleoside phosphorylase PpnP family.
messages: Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.

572477:ALVIN RS02505
gene id: 572477:ALVIN_RS02505
uniprot id: D3RNU9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.

572477:ALVIN RS03935
gene id: 572477:ALVIN_RS03935
uniprot id: D3RQD5
names: Similarity
messages: Belongs to the P(II) protein family.

572477:ALVIN RS08555
gene id: 572477:ALVIN_RS08555
uniprot id: D3RU00
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.
messages: Catalyzes the oxidation of L-aspartate to iminoaspartate.
messages: Cytoplasm

572477:ALVIN RS11810
gene id: 572477:ALVIN_RS11810
uniprot id: D3RMZ9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

572477:ALVIN RS05130
gene id: 572477:ALVIN_RS05130
uniprot id: D3RRR9
names: Similarity
messages: Belongs to the XFP family.

572477:ALVIN RS11505
gene id: 572477:ALVIN_RS11505
uniprot id: D3RMT8
names: Similarity
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.
messages: Heterodimer of a large and a small subunit.

572477:ALVIN RS15505
gene id: 572477:ALVIN_RS15505
uniprot id: D3RS73
names: Similarity
messages: Belongs to the fructosamine kinase family.

572477:ALVIN RS10390
gene id: 572477:ALVIN_RS10390
uniprot id: D3RV74
names: Function
names: Subcellular Location Annotation
messages: Catalyzes the Claisen rearrangement of chorismate to prephenate and the decarboxylation/dehydration of prephenate to phenylpyruvate.
messages: Cytoplasm

572477:ALVIN RS07510
gene id: 572477:ALVIN_RS07510
uniprot id: D3RTE3
names: Similarity
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.

572477:ALVIN RS01435
gene id: 572477:ALVIN_RS01435
uniprot id: D3RMJ1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A monovalent cation. Ammonium or potassium.
messages: Belongs to the type III pantothenate kinase family.
messages: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS14245
gene id: 572477:ALVIN_RS14245
uniprot id: D3RQS9
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatC family.
messages: Heterotrimer of A, B and C subunits.

572477:ALVIN RS15765
gene id: 572477:ALVIN_RS15765
uniprot id: D3RW50
names: Cofactor
names: Similarity
messages: Belongs to the RtcB family.
messages: Binds 2 manganese ions per subunit.

572477:ALVIN RS04785
gene id: 572477:ALVIN_RS04785
uniprot id: D3RR80
names: Similarity
messages: Belongs to the four-carbon acid sugar kinase family.

572477:ALVIN RS09345
gene id: 572477:ALVIN_RS09345
uniprot id: D3RUE4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NifD/NifK/NifE/NifN family.
messages: Binds 1 [8Fe-7S] cluster per heterodimer.
messages: Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2).
messages: This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation.

572477:ALVIN RS04190
gene id: 572477:ALVIN_RS04190
uniprot id: D3RQI7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
messages: Cell inner membrane
messages: Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
messages: The complex is composed of two ATP-binding proteins (LolD) and two transmembrane proteins (LolC and LolE).

572477:ALVIN RS00240
gene id: 572477:ALVIN_RS00240
uniprot id: D3RUX1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.
messages: Cytoplasm
messages: Homotrimer.
messages: In the C-terminal section; belongs to the transferase hexapeptide repeat family.
messages: In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.

572477:ALVIN RS12630
gene id: 572477:ALVIN_RS12630
uniprot id: D3RP50
names: Similarity
messages: Belongs to the UPF0175 family.

572477:ALVIN RS11005
gene id: 572477:ALVIN_RS11005
uniprot id: D3RVW4
names: Similarity
messages: Belongs to the UPF0229 family.

572477:ALVIN RS00855
gene id: 572477:ALVIN_RS00855
uniprot id: D3RVL2
names: Similarity
messages: Belongs to the TrpC family.

572477:ALVIN RS15535
gene id: 572477:ALVIN_RS15535
uniprot id: D3RS79
names: Similarity
messages: Belongs to the FeoA family.

572477:ALVIN RS05605
gene id: 572477:ALVIN_RS05605
uniprot id: D3RSB3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Cytoplasm
messages: Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
messages: Monomer.

572477:ALVIN RS00885
gene id: 572477:ALVIN_RS00885
uniprot id: D3RVL8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL13 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

572477:ALVIN RS00970
gene id: 572477:ALVIN_RS00970
uniprot id: D3RVN3
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS02515
gene id: 572477:ALVIN_RS02515
uniprot id: D3RNV1
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
messages: Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.

572477:ALVIN RS07185
gene id: 572477:ALVIN_RS07185
uniprot id: D3RT79
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HupC/HyaC/HydC family.
messages: Membrane

572477:ALVIN RS03155
gene id: 572477:ALVIN_RS03155
uniprot id: D3RPK3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TrpB family.
messages: Tetramer of two alpha and two beta chains.
messages: The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.

572477:ALVIN RS03805
gene id: 572477:ALVIN_RS03805
uniprot id: D3RQA9
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

572477:ALVIN RS08875
gene id: 572477:ALVIN_RS08875
uniprot id: D3RU56
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS14880
gene id: 572477:ALVIN_RS14880
uniprot id: D3RRH2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the guanylate kinase family.
messages: Cytoplasm
messages: Essential for recycling GMP and indirectly, cGMP.

572477:ALVIN RS06865
gene id: 572477:ALVIN_RS06865
uniprot id: D3RT17
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SelA family.
messages: Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
messages: Cytoplasm

572477:ALVIN RS13370
gene id: 572477:ALVIN_RS13370
uniprot id: D3RPX5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RnfG family.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS04360
gene id: 572477:ALVIN_RS04360
uniprot id: D3RQZ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane

572477:ALVIN RS06075
gene id: 572477:ALVIN_RS06075
uniprot id: D3RSL0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylosuccinate synthetase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.

572477:ALVIN RS06720
gene id: 572477:ALVIN_RS06720
uniprot id: D3RSY9
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

572477:ALVIN RS00050
gene id: 572477:ALVIN_RS00050
uniprot id: D3RUT2
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

572477:ALVIN RS12600
gene id: 572477:ALVIN_RS12600
uniprot id: D3RP44
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Maf family. YhdE subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.

572477:ALVIN RS14035
gene id: 572477:ALVIN_RS14035
uniprot id: D3RQN7
names: Similarity
messages: Belongs to the phosphohexose mutase family.

572477:ALVIN RS09295
gene id: 572477:ALVIN_RS09295
uniprot id: D3RUD4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
messages: Cell membrane
messages: Heterodimer of a large and a small subunit.

572477:ALVIN RS05285
gene id: 572477:ALVIN_RS05285
uniprot id: D3RRV1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase U32 family. UbiV subfamily.
messages: Forms an heterodimer with UbiU.
messages: Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiU, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway.

572477:ALVIN RS09835
gene id: 572477:ALVIN_RS09835
uniprot id: D3RUP4
names: Cofactor
names: Similarity
messages: Belongs to the RimK family.
messages: Binds 2 magnesium or manganese ions per subunit.

572477:ALVIN RS00140
gene id: 572477:ALVIN_RS00140
uniprot id: D3RUV0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TrkH potassium transport family.
messages: Cell inner membrane
messages: Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA.
messages: Membrane

572477:ALVIN RS01630
gene id: 572477:ALVIN_RS01630
uniprot id: D3RMN0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily.
messages: Cell inner membrane
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.

572477:ALVIN RS12785
gene id: 572477:ALVIN_RS12785
uniprot id: D3RP85
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

572477:ALVIN RS08810
gene id: 572477:ALVIN_RS08810
uniprot id: D3RU43
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the NrdR family.
messages: Binds 1 zinc ion.
messages: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.

572477:ALVIN RS15560
gene id: 572477:ALVIN_RS15560
uniprot id: D3RS84
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
messages: Binds 1 potassium ion per subunit.
messages: Cytoplasm
messages: Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS04820
gene id: 572477:ALVIN_RS04820
uniprot id: D3RR87
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS05725
gene id: 572477:ALVIN_RS05725
uniprot id: D3RSD6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsiE family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS03320
gene id: 572477:ALVIN_RS03320
uniprot id: D3RPN6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum basal body
messages: Belongs to the flagella basal body rod proteins family.
messages: The basal body constitutes a major portion of the flagellar organelle and consists of five rings (E,L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.

572477:ALVIN RS11135
gene id: 572477:ALVIN_RS11135
uniprot id: D3RVZ1
names: Function
names: Similarity
messages: Belongs to the CheD family.
messages: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.

572477:ALVIN RS06890
gene id: 572477:ALVIN_RS06890
uniprot id: D3RT22
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0114 family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS14595
gene id: 572477:ALVIN_RS14595
uniprot id: D3RRB8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type III secretion exporter family.
messages: Cell membrane
messages: Membrane
messages: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.

572477:ALVIN RS02080
gene id: 572477:ALVIN_RS02080
uniprot id: D3RN93
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the YbaB/EbfC family.
messages: Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
messages: Homodimer.
messages: nucleoid

572477:ALVIN RS01430
gene id: 572477:ALVIN_RS01430
uniprot id: D3RMJ0
names: Function
names: Similarity
messages: Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
messages: Belongs to the biotin--protein ligase family.

572477:ALVIN RS11800
gene id: 572477:ALVIN_RS11800
uniprot id: D3RMZ7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

572477:ALVIN RS00670
gene id: 572477:ALVIN_RS00670
uniprot id: D3RVH5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 28 family. MurG subfamily.
messages: Cell inner membrane
messages: Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS13380
gene id: 572477:ALVIN_RS13380
uniprot id: D3RPX7
names: Similarity
messages: Belongs to the UPF0125 (RnfH) family.

572477:ALVIN RS04995
gene id: 572477:ALVIN_RS04995
uniprot id: D3RRP2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
messages: Belongs to the peroxiredoxin family. Prx6 subfamily.
messages: Cytoplasm
messages: Homodecamer. Pentamer of dimers that assemble into a ring structure.
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. Although the primary sequence of this enzyme is similar to those of the 1-Cys Prx6 enzymes, its catalytic properties resemble those of the typical 2-Cys Prxs and C(R) is provided by the other dimeric subunit to form an intersubunit disulfide. The disulfide is subsequently reduced by thioredoxin.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

572477:ALVIN RS15420
gene id: 572477:ALVIN_RS15420
uniprot id: D3RS53
names: Function
names: Similarity
names: Subunit
messages: A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild-type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity.
messages: Belongs to the RecC family.
messages: Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding.

572477:ALVIN RS00205
gene id: 572477:ALVIN_RS00205
uniprot id: D3RUW4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase C chain family.
messages: Cell inner membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Membrane

572477:ALVIN RS03530
gene id: 572477:ALVIN_RS03530
uniprot id: D3RPS9
names: Caution
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the CarB family.
messages: Binds 4 Mg(2+) or Mn(2+) ions per subunit.
messages: Composed of two chains; the small (or glutamine) chain promotes the hydrolysis of glutamine to ammonia, which is used by the large (or ammonia) chain to synthesize carbamoyl phosphate.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS00280
gene id: 572477:ALVIN_RS00280
uniprot id: D3RUX9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A Gly-cisPro motif from one monomer fits into the active site of the other monomer to allow specific chiral rejection of L-amino acids.
messages: An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.
messages: Belongs to the DTD family.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS09200
gene id: 572477:ALVIN_RS09200
uniprot id: D3RUB7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DapB family.
messages: Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
messages: Cytoplasm
messages: Homotetramer.
messages: Was originally thought to be a dihydrodipicolinate reductase (DHDPR), catalyzing the conversion of dihydrodipicolinate to tetrahydrodipicolinate. However, it was shown in E.coli that the substrate of the enzymatic reaction is not dihydrodipicolinate (DHDP) but in fact (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinic acid (HTPA), the product released by the DapA-catalyzed reaction.

572477:ALVIN RS14280
gene id: 572477:ALVIN_RS14280
uniprot id: D3RQT6
names: Function
names: Similarity
messages: Belongs to the peptidase S11 family.
messages: Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.

572477:ALVIN RS00350
gene id: 572477:ALVIN_RS00350
uniprot id: O31216
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Binds 1 heme c group covalently per subunit.
messages: Cell membrane
messages: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c.
messages: The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.

572477:ALVIN RS11475
gene id: 572477:ALVIN_RS11475
uniprot id: D3RMT2
names: Similarity
messages: Belongs to the 5'(3')-deoxyribonucleotidase family.

572477:ALVIN RS14420
gene id: 572477:ALVIN_RS14420
uniprot id: D3RQW2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
messages: Cell inner membrane
messages: Forms a membrane-associated complex with FtsE.
messages: Membrane
messages: Part of the ABC transporter FtsEX involved in cellular division.

572477:ALVIN RS12210
gene id: 572477:ALVIN_RS12210
uniprot id: D3RNJ2
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

572477:ALVIN RS08190
gene id: 572477:ALVIN_RS08190
uniprot id: D3RTS6
names: Similarity
messages: Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.

572477:ALVIN RS04340
gene id: 572477:ALVIN_RS04340
uniprot id: D3RQZ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB family.
messages: Cell inner membrane
messages: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins.

572477:ALVIN RS15035
gene id: 572477:ALVIN_RS15035
uniprot id: D3RRK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GSP G family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS01585
gene id: 572477:ALVIN_RS01585
uniprot id: D3RMM1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transketolase family.
messages: Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
messages: Homodimer.

572477:ALVIN RS05945
gene id: 572477:ALVIN_RS05945
uniprot id: D3RSI4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ferritin family. Prokaryotic subfamily.
messages: Cytoplasm
messages: Iron-storage protein.

572477:ALVIN RS12105
gene id: 572477:ALVIN_RS12105
uniprot id: D3RNH2
names: Function
names: Similarity
messages: Belongs to the complex I 51 kDa subunit family.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.

572477:ALVIN RS04835
gene id: 572477:ALVIN_RS04835
uniprot id: D3RR90
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS13750
gene id: 572477:ALVIN_RS13750
uniprot id: D3RQ51
names: Caution
names: Function
names: Similarity
messages: Belongs to the glucose-6-phosphate dehydrogenase family.
messages: Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS13835
gene id: 572477:ALVIN_RS13835
uniprot id: D3RQ68
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. UvrA family.
messages: Cytoplasm
messages: Forms a heterotetramer with UvrB during the search for lesions.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.

572477:ALVIN RS03890
gene id: 572477:ALVIN_RS03890
uniprot id: D3RQC6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CcoP / FixP family.
messages: Binds 2 heme C groups per subunit.
messages: C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
messages: Cell inner membrane
messages: Component of the cbb3-type cytochrome c oxidase.

572477:ALVIN RS08290
gene id: 572477:ALVIN_RS08290
uniprot id: D3RTU5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane

572477:ALVIN RS02050
gene id: 572477:ALVIN_RS02050
uniprot id: D3RN87
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M20A family. DapE subfamily.
messages: Binds 2 Zn(2+) or Co(2+) ions per subunit.
messages: Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.
messages: Homodimer.

572477:ALVIN RS01750
gene id: 572477:ALVIN_RS01750
uniprot id: D3RN29
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS14135
gene id: 572477:ALVIN_RS14135
uniprot id: D3RQQ7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
messages: Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
messages: Cytoplasm
messages: Heteromultimer composed of HisG and HisZ subunits.
messages: Lacks the C-terminal regulatory region which is replaced by HisZ.

572477:ALVIN RS01005
gene id: 572477:ALVIN_RS01005
uniprot id: D3RVP0
names: Similarity
messages: Belongs to the UPF0301 (AlgH) family.

572477:ALVIN RS06325
gene id: 572477:ALVIN_RS06325
uniprot id: D3RSR0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Cytoplasm
messages: Homotetramer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

572477:ALVIN RS09185
gene id: 572477:ALVIN_RS09185
uniprot id: D3RUB5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the pyridoxamine 5'-phosphate oxidase family.
messages: Binds 1 FMN per subunit.
messages: Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
messages: Homodimer.

572477:ALVIN RS07400
gene id: 572477:ALVIN_RS07400
uniprot id: D3RTC1
names: Similarity
messages: Belongs to the NifZ family.

572477:ALVIN RS06320
gene id: 572477:ALVIN_RS06320
uniprot id: D3RSQ9
names: Caution
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the radical SAM superfamily. RlmN family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Reaction proceeds by a ping-pong mechanism involving intermediate methylation of a conserved cysteine residue.
messages: Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity.

572477:ALVIN RS13890
gene id: 572477:ALVIN_RS13890
uniprot id: D3RQK6
names: Caution
names: Function
names: Subunit
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.

572477:ALVIN RS03755
gene id: 572477:ALVIN_RS03755
uniprot id: D3RQ99
names: Similarity
messages: Belongs to the MEMO1 family.

572477:ALVIN RS00230
gene id: 572477:ALVIN_RS00230
uniprot id: D3RUW9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.

572477:ALVIN RS07405
gene id: 572477:ALVIN_RS07405
uniprot id: D3RTC2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NifW family.
messages: Homotrimer; associates with NifD.
messages: May protect the nitrogenase Fe-Mo protein from oxidative damage.

572477:ALVIN RS04365
gene id: 572477:ALVIN_RS04365
uniprot id: D3RQZ9
names: Similarity
messages: Belongs to the protein-tyrosine phosphatase family.

572477:ALVIN RS11240
gene id: 572477:ALVIN_RS11240
uniprot id: D3RW11
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
messages: Cell inner membrane
messages: Membrane
messages: Probable transporter of a GTP-driven Fe(2+) uptake system.

572477:ALVIN RS07845
gene id: 572477:ALVIN_RS07845
uniprot id: D3RTK9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
messages: Cytoplasm
messages: Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.

572477:ALVIN RS03780
gene id: 572477:ALVIN_RS03780
uniprot id: D3RQA4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsiE family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS14800
gene id: 572477:ALVIN_RS14800
uniprot id: D3RRF6
names: Function
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.

572477:ALVIN RS12655
gene id: 572477:ALVIN_RS12655
uniprot id: D3RP57
names: Similarity
messages: Belongs to the RutC family.

572477:ALVIN RS05535
gene id: 572477:ALVIN_RS05535
uniprot id: O66036
names: Similarity
messages: Belongs to the sulfate adenylyltransferase family.

572477:ALVIN RS09410
gene id: 572477:ALVIN_RS09410
uniprot id: D3RUF7
names: Similarity
messages: Belongs to the fabD family.

572477:ALVIN RS16090
gene id: 572477:ALVIN_RS16090
uniprot id: D3RWB6
names: Similarity
messages: Belongs to the tRNA methyltransferase O family.

572477:ALVIN RS13720
gene id: 572477:ALVIN_RS13720
uniprot id: D3RQ45
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the beta-class carbonic anhydrase family. CsoSCA subfamily.
messages: Carboxysome

572477:ALVIN RS09030
gene id: 572477:ALVIN_RS09030
uniprot id: D3RU86
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS10115
gene id: 572477:ALVIN_RS10115
uniprot id: D3RV23
names: Similarity
messages: Belongs to the glutathione peroxidase family.

572477:ALVIN RS10585
gene id: 572477:ALVIN_RS10585
uniprot id: D3RVB3
names: Similarity
messages: Belongs to the homoserine dehydrogenase family.

572477:ALVIN RS16220
gene id: 572477:ALVIN_RS16220
uniprot id: D3RWE6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

572477:ALVIN RS06405
gene id: 572477:ALVIN_RS06405
uniprot id: D3RSS6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
messages: Membrane

572477:ALVIN RS11655
gene id: 572477:ALVIN_RS11655
uniprot id: D3RMW7
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

572477:ALVIN RS05370
gene id: 572477:ALVIN_RS05370
uniprot id: D3RRW8
names: Similarity
messages: Belongs to the precorrin methyltransferase family.

572477:ALVIN RS11950
gene id: 572477:ALVIN_RS11950
uniprot id: D3RNE4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP transporter small permease family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
messages: The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins.

572477:ALVIN RS06950
gene id: 572477:ALVIN_RS06950
uniprot id: D3RT34
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06820
gene id: 572477:ALVIN_RS06820
uniprot id: D3RT08
names: Function
names: Similarity
messages: Belongs to the RecN family.
messages: May be involved in recombinational repair of damaged DNA.

572477:ALVIN RS06125
gene id: 572477:ALVIN_RS06125
uniprot id: D3RSM0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class II aldolase/RraA-like family.
messages: Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
messages: Homotrimer.

572477:ALVIN RS15075
gene id: 572477:ALVIN_RS15075
uniprot id: D3RRL0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATPase component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm. Acts as a molecular motor to provide the energy that is required for assembly of the pseudopilus and the extrusion of substrates generated in the cytoplasm.
messages: Belongs to the GSP E family.
messages: Cell inner membrane

572477:ALVIN RS11030
gene id: 572477:ALVIN_RS11030
uniprot id: D3RVW9
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

572477:ALVIN RS15215
gene id: 572477:ALVIN_RS15215
uniprot id: D3RS13
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

572477:ALVIN RS03265
gene id: 572477:ALVIN_RS03265
uniprot id: D3RPM5
names: Similarity
messages: Belongs to the type III secretion exporter family.

572477:ALVIN RS11125
gene id: 572477:ALVIN_RS11125
uniprot id: D3RVY9
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CheB family.
messages: Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.
messages: Cytoplasm
messages: Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
messages: Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.

572477:ALVIN RS12695
gene id: 572477:ALVIN_RS12695
uniprot id: Q93UZ0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the RuBisCO large chain family. Type IV subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity (By similarity).

572477:ALVIN RS09545
gene id: 572477:ALVIN_RS09545
uniprot id: D3RUI4
names: Similarity
messages: Belongs to the asparagine synthetase family.

572477:ALVIN RS10280
gene id: 572477:ALVIN_RS10280
uniprot id: D3RV53
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06940
gene id: 572477:ALVIN_RS06940
uniprot id: D3RT32
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS07795
gene id: 572477:ALVIN_RS07795
uniprot id: D3RTJ9
names: Function
names: Similarity
messages: Belongs to the CheD family.
messages: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.

572477:ALVIN RS16120
gene id: 572477:ALVIN_RS16120
uniprot id: D3RWC2
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS00405
gene id: 572477:ALVIN_RS00405
uniprot id: D3RVC7
names: Function
names: Similarity
messages: Belongs to the MsrA Met sulfoxide reductase family.
messages: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.

572477:ALVIN RS03555
gene id: 572477:ALVIN_RS03555
uniprot id: D3RPT4
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

572477:ALVIN RS05645
gene id: 572477:ALVIN_RS05645
uniprot id: D3RSC1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0073 (Hly-III) family.
messages: Membrane

572477:ALVIN RS04880
gene id: 572477:ALVIN_RS04880
uniprot id: D3RRM2
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

572477:ALVIN RS07210
gene id: 572477:ALVIN_RS07210
uniprot id: D3RT84
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-2 integral membrane protein family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS07890
gene id: 572477:ALVIN_RS07890
uniprot id: D3RTL7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.
messages: Cytoplasm
messages: Specifically methylates the ribose of guanosine 2251 in 23S rRNA.

572477:ALVIN RS01225
gene id: 572477:ALVIN_RS01225
uniprot id: D3RMF0
names: Similarity
messages: Belongs to the beta-class carbonic anhydrase family.

572477:ALVIN RS13700
gene id: 572477:ALVIN_RS13700
uniprot id: D3RQ41
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

572477:ALVIN RS06845
gene id: 572477:ALVIN_RS06845
uniprot id: D3RT13
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DnaJ family.
messages: Binds 2 Zn(2+) ions per monomer.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
messages: The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity.

572477:ALVIN RS05215
gene id: 572477:ALVIN_RS05215
uniprot id: D3RRT7
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS01770
gene id: 572477:ALVIN_RS01770
uniprot id: D3RN33
names: Function
names: Similarity
names: Subunit
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
messages: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).
messages: Homotetramer.

572477:ALVIN RS01530
gene id: 572477:ALVIN_RS01530
uniprot id: D3RML0
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M3 family.
messages: Binds 1 zinc ion.

572477:ALVIN RS14390
gene id: 572477:ALVIN_RS14390
uniprot id: P71154
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial CoaD family.
messages: Cytoplasm
messages: Homohexamer.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

572477:ALVIN RS11215
gene id: 572477:ALVIN_RS11215
uniprot id: D3RW06
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

572477:ALVIN RS03875
gene id: 572477:ALVIN_RS03875
uniprot id: D3RQC3
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the heme-copper respiratory oxidase family.
messages: Binds 1 copper ion per subunit, denoted as copper B.
messages: Binds 2 heme groups per subunit, denoted as high- and low-spin.
messages: Membrane

572477:ALVIN RS13005
gene id: 572477:ALVIN_RS13005
uniprot id: D3RPC5
names: Subcellular Location Annotation
messages: Cell inner membrane

572477:ALVIN RS14170
gene id: 572477:ALVIN_RS14170
uniprot id: D3RQR4
names: Similarity
messages: Belongs to the SIS family. GutQ/KpsF subfamily.

572477:ALVIN RS13405
gene id: 572477:ALVIN_RS13405
uniprot id: D3RPY2
names: Similarity
messages: Belongs to the PhoH family.

572477:ALVIN RS03370
gene id: 572477:ALVIN_RS03370
uniprot id: D3RPP6
names: Cofactor
names: PTM
names: Subcellular Location Annotation
messages: Binds 2 heme groups per subunit.
messages: Binds 2 heme groups.
messages: Periplasm

572477:ALVIN RS09015
gene id: 572477:ALVIN_RS09015
uniprot id: D3RU83
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

572477:ALVIN RS04320
gene id: 572477:ALVIN_RS04320
uniprot id: D3RQZ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

572477:ALVIN RS12430
gene id: 572477:ALVIN_RS12430
uniprot id: D3RNN6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DmsC family.
messages: Cell inner membrane
messages: Forms a heterotrimeric membrane-bound complex composed of a catalytic heterodimer (SoeAB) and a membrane anchor protein (SoeC).
messages: Part of the SoeABC complex that catalyzes the oxidation of sulfite to sulfate. SoeC probably anchors and stabilizes the catalytic subunits.

572477:ALVIN RS15120
gene id: 572477:ALVIN_RS15120
uniprot id: D3RRZ4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.

572477:ALVIN RS10765
gene id: 572477:ALVIN_RS10765
uniprot id: D3RVR9
names: Similarity
messages: Belongs to the citrate synthase family.

572477:ALVIN RS09830
gene id: 572477:ALVIN_RS09830
uniprot id: D3RUP3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A8 family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: This protein specifically catalyzes the removal of signal peptides from prolipoproteins.

572477:ALVIN RS06735
gene id: 572477:ALVIN_RS06735
uniprot id: P22850
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Expressed when grown photoautotrophically (at protein level).
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: In C.vinosum two similar set of genes code for RuBisCO large and small chains: the RbcL-RbcS and the RbcA-RbcB pair (this entry). Under standard photoautotrophic culture conditions only the latter pair seems active, the former being probably cryptic.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.

572477:ALVIN RS06160
gene id: 572477:ALVIN_RS06160
uniprot id: D3RSM7
names: Similarity
messages: Belongs to the UPF0111 family.

572477:ALVIN RS11510
gene id: 572477:ALVIN_RS11510
uniprot id: D3RMT9
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS14775
gene id: 572477:ALVIN_RS14775
uniprot id: D3RRF0
names: Similarity
messages: Belongs to the threonine synthase family.

572477:ALVIN RS00870
gene id: 572477:ALVIN_RS00870
uniprot id: D3RVL5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COQ7 family.
messages: Binds 2 iron ions per subunit.
messages: Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
messages: Cell membrane

572477:ALVIN RS08665
gene id: 572477:ALVIN_RS08665
uniprot id: D3RU19
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PhoU family.
messages: Cytoplasm
messages: Homodimer.
messages: Plays a role in the regulation of phosphate uptake.

572477:ALVIN RS14210
gene id: 572477:ALVIN_RS14210
uniprot id: D3RQS2
names: Caution
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the HPrK/P family.
messages: Both phosphorylation and phosphorolysis are carried out by the same active site and suggest a common mechanism for both reactions.
messages: Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).
messages: Homohexamer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: The Walker A ATP-binding motif also binds Pi and PPi.

572477:ALVIN RS10885
gene id: 572477:ALVIN_RS10885
uniprot id: D3RVU2
names: Function
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.

572477:ALVIN RS00755
gene id: 572477:ALVIN_RS00755
uniprot id: D3RVJ2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DNA gyrase inhibitor YacG family.
messages: Binds 1 zinc ion.
messages: Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
messages: Interacts with GyrB.

572477:ALVIN RS11100
gene id: 572477:ALVIN_RS11100
uniprot id: D3RVY4
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

572477:ALVIN RS14345
gene id: 572477:ALVIN_RS14345
uniprot id: D3RQU8
names: Similarity
messages: Belongs to the SCO1/2 family.

572477:ALVIN RS00395
gene id: 572477:ALVIN_RS00395
uniprot id: D3RVC5
names: Similarity
messages: Belongs to the PrpF family.

572477:ALVIN RS14625
gene id: 572477:ALVIN_RS14625
uniprot id: D3RRC3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliP/MopC/SpaP family.
messages: Cell membrane
messages: Membrane
messages: Plays a role in the flagellum-specific transport system.

572477:ALVIN RS15445
gene id: 572477:ALVIN_RS15445
uniprot id: D3RS61
names: Function
names: Similarity
names: Subunit
messages: A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD.
messages: Belongs to the RecD family.
messages: Heterotrimer of RecB, RecC and RecD. All subunits contribute to DNA-binding.

572477:ALVIN RS06930
gene id: 572477:ALVIN_RS06930
uniprot id: D3RT30
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS11910
gene id: 572477:ALVIN_RS11910
uniprot id: D3RND7
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the glutamyl-tRNA reductase family.
messages: Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
messages: During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA.
messages: Homodimer.
messages: Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization.

572477:ALVIN RS02735
gene id: 572477:ALVIN_RS02735
uniprot id: D3RNZ1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-3 integral membrane protein family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS10520
gene id: 572477:ALVIN_RS10520
uniprot id: D3RVA0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M48 family. BepA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
messages: Periplasm

572477:ALVIN RS14410
gene id: 572477:ALVIN_RS14410
uniprot id: D3RQW0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. FtsY subfamily.
messages: Cell inner membrane
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
messages: Membrane
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule.

572477:ALVIN RS07075
gene id: 572477:ALVIN_RS07075
uniprot id: D3RT57
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS00315
gene id: 572477:ALVIN_RS00315
uniprot id: P45369
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. Thiolase family.
messages: Cytoplasm
messages: Homotetramer.

572477:ALVIN RS08270
gene id: 572477:ALVIN_RS08270
uniprot id: D3RTU2
names: Function
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.

572477:ALVIN RS14920
gene id: 572477:ALVIN_RS14920
uniprot id: D3RRI0
names: Similarity
messages: Belongs to the UPF0758 family.

572477:ALVIN RS00220
gene id: 572477:ALVIN_RS00220
uniprot id: D3RUW7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.
messages: Cell inner membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.

572477:ALVIN RS03455
gene id: 572477:ALVIN_RS03455
uniprot id: D3RPR3
names: Similarity
messages: Belongs to the thioredoxin family.

572477:ALVIN RS15275
gene id: 572477:ALVIN_RS15275
uniprot id: D3RS25
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS12260
gene id: 572477:ALVIN_RS12260
uniprot id: D3RNK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.
messages: Membrane

572477:ALVIN RS02170
gene id: 572477:ALVIN_RS02170
uniprot id: D3RNB1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Monomer.
messages: Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.

572477:ALVIN RS10425
gene id: 572477:ALVIN_RS10425
uniprot id: D3RV81
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 'phage' integrase family. XerC subfamily.
messages: Cytoplasm
messages: Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.

572477:ALVIN RS06545
gene id: 572477:ALVIN_RS06545
uniprot id: D3RSV4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial glucokinase family.
messages: Cytoplasm

572477:ALVIN RS14965
gene id: 572477:ALVIN_RS14965
uniprot id: D3RRI9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glutamine synthetase family.
messages: Cytoplasm
messages: Oligomer of 12 subunits arranged in the form of two hexagons.

572477:ALVIN RS04510
gene id: 572477:ALVIN_RS04510
uniprot id: D3RR26
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M48B family.
messages: Binds 1 zinc ion per subunit.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS11205
gene id: 572477:ALVIN_RS11205
uniprot id: D3RW04
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

572477:ALVIN RS05810
gene id: 572477:ALVIN_RS05810
uniprot id: D3RSF5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RnfG family.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS10235
gene id: 572477:ALVIN_RS10235
uniprot id: D3RV45
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioester dehydratase family. FabZ subfamily.
messages: Cytoplasm
messages: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.

572477:ALVIN RS02720
gene id: 572477:ALVIN_RS02720
uniprot id: D3RNY8
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
messages: Cell membrane
messages: Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The autoendoproteolytic cleavage occurs by a canonical serine protease mechanism, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain. During this reaction, the Ser that is part of the protease active site of the proenzyme becomes the pyruvoyl prosthetic group, which constitutes an essential element of the active site of the mature decarboxylase.

572477:ALVIN RS03950
gene id: 572477:ALVIN_RS03950
uniprot id: D3RQD8
names: Similarity
messages: Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family.

572477:ALVIN RS08770
gene id: 572477:ALVIN_RS08770
uniprot id: D3RU35
names: Function
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).

572477:ALVIN RS01710
gene id: 572477:ALVIN_RS01710
uniprot id: D3RN22
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Membrane

572477:ALVIN RS12990
gene id: 572477:ALVIN_RS12990
uniprot id: D3RPC2
names: Cofactor
names: Similarity
messages: Belongs to the TPP enzyme family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.

572477:ALVIN RS10490
gene id: 572477:ALVIN_RS10490
uniprot id: D3RV94
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

572477:ALVIN RS10905
gene id: 572477:ALVIN_RS10905
uniprot id: D3RVU6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
messages: Membrane

572477:ALVIN RS06685
gene id: 572477:ALVIN_RS06685
uniprot id: D3RSY2
names: Similarity
messages: Belongs to the V-ATPase V0D/AC39 subunit family.

572477:ALVIN RS05990
gene id: 572477:ALVIN_RS05990
uniprot id: D3RSJ3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
messages: Cell membrane
messages: Heterotetramer composed of ParC and ParE.
messages: Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule.

572477:ALVIN RS04855
gene id: 572477:ALVIN_RS04855
uniprot id: D3RR94
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class-I fumarase family.
messages: Catalyzes the reversible hydration of fumarate to (S)-malate.
messages: Homodimer.

572477:ALVIN RS03220
gene id: 572477:ALVIN_RS03220
uniprot id: D3RPL4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endonuclease Cas1 family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas2 homodimer.

572477:ALVIN RS11765
gene id: 572477:ALVIN_RS11765
uniprot id: D3RMZ0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

572477:ALVIN RS14670
gene id: 572477:ALVIN_RS14670
uniprot id: D3RRD1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliG family.
messages: Cell inner membrane
messages: FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
messages: Membrane

572477:ALVIN RS13320
gene id: 572477:ALVIN_RS13320
uniprot id: D3RPW5
names: Similarity
messages: Belongs to the HesB/IscA family.

572477:ALVIN RS04000
gene id: 572477:ALVIN_RS04000
uniprot id: D3RQE8
names: Similarity
messages: Belongs to the peptidase A31 family.

572477:ALVIN RS06005
gene id: 572477:ALVIN_RS06005
uniprot id: D3RSJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioester dehydratase family. FabA subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.

572477:ALVIN RS02770
gene id: 572477:ALVIN_RS02770
uniprot id: D3RNZ8
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS08835
gene id: 572477:ALVIN_RS08835
uniprot id: D3RU48
names: Similarity
messages: Belongs to the asparagine synthetase family.

572477:ALVIN RS02380
gene id: 572477:ALVIN_RS02380
uniprot id: D3RNS5
names: Similarity
messages: Belongs to the KAE1 / TsaD family. TsaB subfamily.

572477:ALVIN RS02120
gene id: 572477:ALVIN_RS02120
uniprot id: D3RNA1
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06060
gene id: 572477:ALVIN_RS06060
uniprot id: D3RSK7
names: Function
names: Similarity
messages: Belongs to the band 7/mec-2 family. HflC subfamily.
messages: HflC and HflK could regulate a protease.

572477:ALVIN RS10610
gene id: 572477:ALVIN_RS10610
uniprot id: D3RVB8
names: Function
names: Similarity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Synthesizes alpha-1,4-glucan chains using ADP-glucose.

572477:ALVIN RS09735
gene id: 572477:ALVIN_RS09735
uniprot id: D3RUM3
names: Function
names: Similarity
messages: Belongs to the carbamoyltransferase HypF family.
messages: Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.

572477:ALVIN RS08630
gene id: 572477:ALVIN_RS08630
uniprot id: D3RU13
names: Similarity
messages: Belongs to the UPF0251 family.

572477:ALVIN RS10535
gene id: 572477:ALVIN_RS10535
uniprot id: D3RVA3
names: Similarity
messages: Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.

572477:ALVIN RS10385
gene id: 572477:ALVIN_RS10385
uniprot id: D3RV73
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
messages: Homodimer.

572477:ALVIN RS11735
gene id: 572477:ALVIN_RS11735
uniprot id: D3RMY4
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

572477:ALVIN RS01820
gene id: 572477:ALVIN_RS01820
uniprot id: D3RN42
names: Similarity
messages: Belongs to the UPF0260 family.

572477:ALVIN RS10830
gene id: 572477:ALVIN_RS10830
uniprot id: Q1W3E0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RlmKL family.
messages: Cytoplasm
messages: Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA.

572477:ALVIN RS15295
gene id: 572477:ALVIN_RS15295
uniprot id: D3RS29
names: Similarity
messages: In the N-terminal section; belongs to the phytochrome family.

572477:ALVIN RS16500
gene id: 572477:ALVIN_RS16500
uniprot id: D3RPS7
names: Similarity
messages: In the N-terminal section; belongs to the phytochrome family.

572477:ALVIN RS14835
gene id: 572477:ALVIN_RS14835
uniprot id: D3RRG3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC1 family. UbiB subfamily.
messages: Cell inner membrane
messages: Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS00695
gene id: 572477:ALVIN_RS00695
uniprot id: D3RVI0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.
messages: Cell inner membrane
messages: Self-interacts. Interacts with FtsZ.

572477:ALVIN RS14505
gene id: 572477:ALVIN_RS14505
uniprot id: D3RRA0
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Clade 'B2' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Non-allosteric.

572477:ALVIN RS02065
gene id: 572477:ALVIN_RS02065
uniprot id: D3RN90
names: Function
names: Similarity
names: Subunit
messages: Belongs to the MinC family.
messages: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
messages: Interacts with MinD and FtsZ.

572477:ALVIN RS12185
gene id: 572477:ALVIN_RS12185
uniprot id: D3RNI7
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

572477:ALVIN RS01920
gene id: 572477:ALVIN_RS01920
uniprot id: D3RN62
names: Function
names: Subunit
messages: DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.

572477:ALVIN RS13880
gene id: 572477:ALVIN_RS13880
uniprot id: D3RQK4
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS12610
gene id: 572477:ALVIN_RS12610
uniprot id: D3RP46
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatA/E family.
messages: Cell inner membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
messages: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.

572477:ALVIN RS12660
gene id: 572477:ALVIN_RS12660
uniprot id: D3RP58
names: Similarity
messages: Belongs to the SAICAR synthetase family.

572477:ALVIN RS05020
gene id: 572477:ALVIN_RS05020
uniprot id: D3RRP7
names: Similarity
messages: Belongs to the YjdM family.

572477:ALVIN RS14820
gene id: 572477:ALVIN_RS14820
uniprot id: D3RRG0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-2 integral membrane protein family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS13930
gene id: 572477:ALVIN_RS13930
uniprot id: D3RQL6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PRA-CH family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS06290
gene id: 572477:ALVIN_RS06290
uniprot id: D3RSQ3
names: Function
names: Similarity
names: Subunit
messages: Associates with the 50S ribosomal subunit.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
messages: GTPase that plays an essential role in the late steps of ribosome biogenesis.

572477:ALVIN RS00150
gene id: 572477:ALVIN_RS00150
uniprot id: D3RUV3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0126 family.
messages: Membrane

572477:ALVIN RS10120
gene id: 572477:ALVIN_RS10120
uniprot id: D3RV24
names: Similarity
messages: Belongs to the ferredoxin--NADP reductase type 1 family.

572477:ALVIN RS12575
gene id: 572477:ALVIN_RS12575
uniprot id: D3RP39
names: Similarity
messages: Belongs to the peptidase U62 family.

572477:ALVIN RS04960
gene id: 572477:ALVIN_RS04960
uniprot id: D3RRN6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M15D family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.

572477:ALVIN RS08830
gene id: 572477:ALVIN_RS08830
uniprot id: D3RU47
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

572477:ALVIN RS04275
gene id: 572477:ALVIN_RS04275
uniprot id: D3RQY1
names: Similarity
messages: Belongs to the transferase hexapeptide repeat family.

572477:ALVIN RS11050
gene id: 572477:ALVIN_RS11050
uniprot id: D3RVX3
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS14045
gene id: 572477:ALVIN_RS14045
uniprot id: D3RQN9
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS05425
gene id: 572477:ALVIN_RS05425
uniprot id: Q06536
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NapC/NirT/NrfH family.
messages: Binds 4 heme groups per subunit.
messages: Cell inner membrane

572477:ALVIN RS09025
gene id: 572477:ALVIN_RS09025
uniprot id: D3RU85
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS04185
gene id: 572477:ALVIN_RS04185
uniprot id: D3RQI6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

572477:ALVIN RS07025
gene id: 572477:ALVIN_RS07025
uniprot id: D3RT49
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family. Tig subfamily.
messages: Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.
messages: Cytoplasm
messages: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase.

572477:ALVIN RS13885
gene id: 572477:ALVIN_RS13885
uniprot id: D3RQK5
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS12970
gene id: 572477:ALVIN_RS12970
uniprot id: D3RPB8
names: Function
names: Similarity
messages: Belongs to the precorrin methyltransferase family.
messages: In the C-terminal section; belongs to the precorrin methyltransferase family.
messages: In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
messages: Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.

572477:ALVIN RS03655
gene id: 572477:ALVIN_RS03655
uniprot id: D3RQ80
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CrcB (TC 9.B.71) family.
messages: Cell inner membrane
messages: Important for reducing fluoride concentration in the cell, thus reducing its toxicity.
messages: Membrane

572477:ALVIN RS05795
gene id: 572477:ALVIN_RS05795
uniprot id: D3RSF2
names: Similarity
messages: Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.

572477:ALVIN RS09310
gene id: 572477:ALVIN_RS09310
uniprot id: D3RUD7
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS11340
gene id: 572477:ALVIN_RS11340
uniprot id: D3RMQ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the L/F-transferase family.
messages: Cytoplasm
messages: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.

572477:ALVIN RS09075
gene id: 572477:ALVIN_RS09075
uniprot id: D3RU94
names: Function
names: Similarity
messages: Belongs to the CobU/CobP family.
messages: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.

572477:ALVIN RS02625
gene id: 572477:ALVIN_RS02625
uniprot id: D3RNX3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. Biotin synthase family.
messages: Binds 1 [2Fe-2S] cluster. The cluster is coordinated with 3 cysteines and 1 arginine.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.
messages: Homodimer.

572477:ALVIN RS10105
gene id: 572477:ALVIN_RS10105
uniprot id: D3RV21
names: Function
names: Similarity
names: Subunit
messages: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
messages: Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
messages: Homodimer.

572477:ALVIN RS00285
gene id: 572477:ALVIN_RS00285
uniprot id: D3RUY0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S33 family.
messages: Cytoplasm

572477:ALVIN RS13420
gene id: 572477:ALVIN_RS13420
uniprot id: D3RPY5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetate uptake transporter (AceTr) (TC 2.A.96) family.
messages: Membrane

572477:ALVIN RS01675
gene id: 572477:ALVIN_RS01675
uniprot id: D3RN15
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS07080
gene id: 572477:ALVIN_RS07080
uniprot id: D3RT58
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

572477:ALVIN RS07490
gene id: 572477:ALVIN_RS07490
uniprot id: D3RTD9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MnmA/TRMU family.
messages: Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS12085
gene id: 572477:ALVIN_RS12085
uniprot id: D3RNG8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 6 family.
messages: Cell membrane
messages: Composed of 13 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS00210
gene id: 572477:ALVIN_RS00210
uniprot id: D3RUW5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Cell inner membrane
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Membrane

572477:ALVIN RS14580
gene id: 572477:ALVIN_RS14580
uniprot id: D3RRB5
names: Similarity
messages: Belongs to the ParA family. MinD subfamily.

572477:ALVIN RS01565
gene id: 572477:ALVIN_RS01565
uniprot id: D3RML7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the class II fructose-bisphosphate aldolase family.
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.
messages: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
messages: One is catalytic and the other provides a structural contribution.

572477:ALVIN RS11790
gene id: 572477:ALVIN_RS11790
uniprot id: D3RMZ5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
messages: Cytoplasm

572477:ALVIN RS04015
gene id: 572477:ALVIN_RS04015
uniprot id: D3RQF1
names: Cofactor
messages: Binds 1 [2Fe-2S] cluster per subunit.

572477:ALVIN RS12070
gene id: 572477:ALVIN_RS12070
uniprot id: D3RNG5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Membrane

572477:ALVIN RS05570
gene id: 572477:ALVIN_RS05570
uniprot id: D3RSA6
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

572477:ALVIN RS00465
gene id: 572477:ALVIN_RS00465
uniprot id: D3RVD9
names: Similarity
messages: Belongs to the citrate synthase family.

572477:ALVIN RS12505
gene id: 572477:ALVIN_RS12505
uniprot id: D3RNQ1
names: Similarity
messages: Belongs to the transglycosylase Slt family.

572477:ALVIN RS08300
gene id: 572477:ALVIN_RS08300
uniprot id: D3RTU7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

572477:ALVIN RS07110
gene id: 572477:ALVIN_RS07110
uniprot id: D3RT64
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LolA family.
messages: Monomer.
messages: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
messages: Periplasm

572477:ALVIN RS12080
gene id: 572477:ALVIN_RS12080
uniprot id: D3RNG7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell inner membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS03600
gene id: 572477:ALVIN_RS03600
uniprot id: D3RQ70
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase E/G family. RNase E subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 2 Zn(2+) ions per homotetramer.
messages: Cell inner membrane
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation. Within the RNA degradosome, RNase E assembles into a homotetramer formed by a dimer of dimers.
messages: Cytoplasm
messages: Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs.

572477:ALVIN RS09710
gene id: 572477:ALVIN_RS09710
uniprot id: D3RUL8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Bacterial flagellum
messages: Belongs to the FliD family.
messages: Homopentamer.
messages: Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
messages: Secreted

572477:ALVIN RS04475
gene id: 572477:ALVIN_RS04475
uniprot id: D3RR21
names: Function
names: Similarity
messages: Belongs to the NifD/NifK/NifE/NifN family.
messages: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor).

572477:ALVIN RS11585
gene id: 572477:ALVIN_RS11585
uniprot id: D3RMV4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiK family.
messages: Cytoplasm
messages: Required for efficient ubiquinone (coenzyme Q) biosynthesis. UbiK is probably an accessory factor of Ubi enzymes and facilitates ubiquinone biosynthesis by acting as an assembly factor, a targeting factor, or both.

572477:ALVIN RS12730
gene id: 572477:ALVIN_RS12730
uniprot id: P51762
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: Cellular chromatophore membrane
messages: Reaction center is composed of four bacteriochlorophylls, two bacteriopheophytins, two ubiquinones, one iron, and two highly hydrophobic polypeptide chains (designated L and M).
messages: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.

572477:ALVIN RS16480
gene id: 572477:ALVIN_RS16480
uniprot id: D3RPP1
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the flagella basal body rod proteins family.
messages: Secreted

572477:ALVIN RS11880
gene id: 572477:ALVIN_RS11880
uniprot id: D3RN09
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PTH family.
messages: Cytoplasm
messages: Monomer.
messages: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.

572477:ALVIN RS15665
gene id: 572477:ALVIN_RS15665
uniprot id: D3RW30
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endoribonuclease Cas2 protein family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas1 homodimer.

572477:ALVIN RS03285
gene id: 572477:ALVIN_RS03285
uniprot id: D3RPM9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FlgA family.
messages: Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly.
messages: Periplasm

572477:ALVIN RS05010
gene id: 572477:ALVIN_RS05010
uniprot id: D3RRP5
names: Similarity
messages: Belongs to the glyoxalase I family.

572477:ALVIN RS07635
gene id: 572477:ALVIN_RS07635
uniprot id: D3RTG8
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

572477:ALVIN RS03970
gene id: 572477:ALVIN_RS03970
uniprot id: D3RQE2
names: Similarity
messages: Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.

572477:ALVIN RS14590
gene id: 572477:ALVIN_RS14590
uniprot id: D3RRB7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
messages: Cell membrane
messages: Membrane
messages: Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin.

572477:ALVIN RS04480
gene id: 572477:ALVIN_RS04480
uniprot id: D3RR22
names: Similarity
messages: Belongs to the NifX/NifY family.

572477:ALVIN RS13340
gene id: 572477:ALVIN_RS13340
uniprot id: D3RPW9
names: Function
names: Subunit
messages: Interacts with sigma-54.
messages: Required for activation of most nif operons, which are directly involved in nitrogen fixation.

572477:ALVIN RS03350
gene id: 572477:ALVIN_RS03350
uniprot id: D3RPP2
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the bacterial flagellin family.
messages: Secreted

572477:ALVIN RS13690
gene id: 572477:ALVIN_RS13690
uniprot id: D3RQ39
names: Similarity
messages: Belongs to the pterin-4-alpha-carbinolamine dehydratase family.

572477:ALVIN RS05450
gene id: 572477:ALVIN_RS05450
uniprot id: D3RRY5
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
messages: Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.
messages: Cytoplasm

572477:ALVIN RS07690
gene id: 572477:ALVIN_RS07690
uniprot id: D3RTH8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Membrane

572477:ALVIN RS02410
gene id: 572477:ALVIN_RS02410
uniprot id: D3RNT1
names: Caution
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the peroxidase family. Peroxidase/catalase subfamily.
messages: Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per dimer.
messages: Formation of the three residue Trp-Tyr-Met cross-link is important for the catalase, but not the peroxidase activity of the enzyme.
messages: Homodimer or homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS11115
gene id: 572477:ALVIN_RS11115
uniprot id: D3RVY7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliL family.
messages: Cell inner membrane
messages: Controls the rotational direction of flagella during chemotaxis.
messages: Membrane

572477:ALVIN RS06635
gene id: 572477:ALVIN_RS06635
uniprot id: D3RSX2
names: Function
names: Similarity
messages: Belongs to the V-ATPase D subunit family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

572477:ALVIN RS08070
gene id: 572477:ALVIN_RS08070
uniprot id: D3RTQ2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Maf family. YceF subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleoside triphosphate pyrophosphatase that hydrolyzes 7-methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.

572477:ALVIN RS14510
gene id: 572477:ALVIN_RS14510
uniprot id: D3RRA1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPase family.
messages: Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
messages: Cytoplasm
messages: Homohexamer.

572477:ALVIN RS11160
gene id: 572477:ALVIN_RS11160
uniprot id: D3RVZ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site.
messages: Cytoplasm
messages: In the C-terminal section; belongs to the helicase family. RecG subfamily.
messages: In the N-terminal section; belongs to the UvrB family.

572477:ALVIN RS05845
gene id: 572477:ALVIN_RS05845
uniprot id: D3RSG3
names: Function
names: Similarity
messages: Belongs to the Mg-chelatase subunits D/I family.
messages: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.

572477:ALVIN RS12325
gene id: 572477:ALVIN_RS12325
uniprot id: D3RNL5
names: Function
messages: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.

572477:ALVIN RS12700
gene id: 572477:ALVIN_RS12700
uniprot id: D3RP66
names: Similarity
messages: Belongs to the UPF0047 family.

572477:ALVIN RS13325
gene id: 572477:ALVIN_RS13325
uniprot id: D3RPW6
names: Similarity
messages: Belongs to the SufE family.

572477:ALVIN RS13705
gene id: 572477:ALVIN_RS13705
uniprot id: D3RQ42
names: Similarity
messages: Belongs to the bacterial microcompartments protein family.

572477:ALVIN RS04135
gene id: 572477:ALVIN_RS04135
uniprot id: D3RQH6
names: Function
messages: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.

572477:ALVIN RS08085
gene id: 572477:ALVIN_RS08085
uniprot id: D3RTQ5
names: Similarity
messages: Belongs to the acylphosphatase family.

572477:ALVIN RS00660
gene id: 572477:ALVIN_RS00660
uniprot id: D3RVH3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family.
messages: Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA).
messages: Cytoplasm

572477:ALVIN RS14250
gene id: 572477:ALVIN_RS14250
uniprot id: D3RQT0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsA/MreB family.
messages: Cytoplasm
messages: Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.
messages: Forms polymers.

572477:ALVIN RS10915
gene id: 572477:ALVIN_RS10915
uniprot id: D3RVU8
names: Similarity
messages: Belongs to the pseudouridine synthase RsuA family.

572477:ALVIN RS03965
gene id: 572477:ALVIN_RS03965
uniprot id: D3RQE1
names: Similarity
messages: Belongs to the peptidase S41A family.

572477:ALVIN RS06990
gene id: 572477:ALVIN_RS06990
uniprot id: D3RT42
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the heat shock protein 90 family.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Molecular chaperone. Has ATPase activity.

572477:ALVIN RS04395
gene id: 572477:ALVIN_RS04395
uniprot id: D3RR05
names: Similarity
messages: Belongs to the bacterial solute-binding protein ModA family.

572477:ALVIN RS00425
gene id: 572477:ALVIN_RS00425
uniprot id: D3RVD1
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS15115
gene id: 572477:ALVIN_RS15115
uniprot id: D3RRL8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Cytoplasm

572477:ALVIN RS09745
gene id: 572477:ALVIN_RS09745
uniprot id: D3RUM5
names: Similarity
messages: Belongs to the hemerythrin family.

572477:ALVIN RS02545
gene id: 572477:ALVIN_RS02545
uniprot id: D3RNV7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the transcriptional regulatory CopG/NikR family.
messages: Binds 1 nickel ion per subunit.
messages: Transcriptional regulator.

572477:ALVIN RS14565
gene id: 572477:ALVIN_RS14565
uniprot id: D3RRB2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CheZ family.
messages: Cytoplasm
messages: Homodimer.
messages: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).

572477:ALVIN RS11575
gene id: 572477:ALVIN_RS11575
uniprot id: D3RMV2
names: Similarity
messages: Belongs to the GSP E family.

572477:ALVIN RS14360
gene id: 572477:ALVIN_RS14360
uniprot id: D3RQV1
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS15400
gene id: 572477:ALVIN_RS15400
uniprot id: D3RS49
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

572477:ALVIN RS05830
gene id: 572477:ALVIN_RS05830
uniprot id: D3RSG0
names: Function
names: Similarity
messages: Belongs to the ribF family.
messages: Catalyzes the phosphorylation of riboflavin to FMN followed by the adenylation of FMN to FAD.

572477:ALVIN RS02520
gene id: 572477:ALVIN_RS02520
uniprot id: D3RNV2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

572477:ALVIN RS03905
gene id: 572477:ALVIN_RS03905
uniprot id: D3RQC9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Cell membrane

572477:ALVIN RS03840
gene id: 572477:ALVIN_RS03840
uniprot id: D3RQB6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Lgt family.
messages: Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
messages: Cell inner membrane

572477:ALVIN RS04910
gene id: 572477:ALVIN_RS04910
uniprot id: D3RRM7
names: Similarity
messages: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family.

572477:ALVIN RS12865
gene id: 572477:ALVIN_RS12865
uniprot id: D3RP97
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS08790
gene id: 572477:ALVIN_RS08790
uniprot id: D3RU39
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DHBP synthase family.
messages: Binds 2 divalent metal cations per subunit. Magnesium or manganese.
messages: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
messages: Homodimer.
messages: In the C-terminal section; belongs to the GTP cyclohydrolase II family.
messages: In the N-terminal section; belongs to the DHBP synthase family.

572477:ALVIN RS08785
gene id: 572477:ALVIN_RS08785
uniprot id: D3RU38
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DMRL synthase family.
messages: Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
messages: Forms an icosahedral capsid composed of 60 subunits, arranged as a dodecamer of pentamers.

572477:ALVIN RS00500
gene id: 572477:ALVIN_RS00500
uniprot id: D3RVE5
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS10860
gene id: 572477:ALVIN_RS10860
uniprot id: D3RVT7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS10320
gene id: 572477:ALVIN_RS10320
uniprot id: D3RV60
names: Similarity
messages: Belongs to the Smg family.

572477:ALVIN RS08135
gene id: 572477:ALVIN_RS08135
uniprot id: D3RTR5
names: Function
messages: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited.

572477:ALVIN RS05805
gene id: 572477:ALVIN_RS05805
uniprot id: D3RSF4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrB/RnfD family.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS00655
gene id: 572477:ALVIN_RS00655
uniprot id: D3RVH2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 4 family. MraY subfamily.
messages: Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS02825
gene id: 572477:ALVIN_RS02825
uniprot id: D3RP09
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
messages: Binds 3 [4Fe-4S] clusters.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS06600
gene id: 572477:ALVIN_RS06600
uniprot id: D3RSW5
names: Similarity
messages: Belongs to the YciI family.

572477:ALVIN RS12850
gene id: 572477:ALVIN_RS12850
uniprot id: D3RP93
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS12315
gene id: 572477:ALVIN_RS12315
uniprot id: D3RNL3
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CheB family.
messages: Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.
messages: Cytoplasm
messages: Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
messages: Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.

572477:ALVIN RS11720
gene id: 572477:ALVIN_RS11720
uniprot id: D3RMY1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL24 family.
messages: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
messages: One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit.

572477:ALVIN RS13675
gene id: 572477:ALVIN_RS13675
uniprot id: D3RQ36
names: Similarity
messages: Belongs to the HY2 family.

572477:ALVIN RS13605
gene id: 572477:ALVIN_RS13605
uniprot id: D3RQ23
names: Function
names: Similarity
names: Subunit
messages: Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
messages: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
messages: Monomer.

572477:ALVIN RS02615
gene id: 572477:ALVIN_RS02615
uniprot id: D3RNX1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AB hydrolase superfamily. Carboxylesterase BioH family.
messages: Cytoplasm
messages: Monomer.
messages: The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.

572477:ALVIN RS13915
gene id: 572477:ALVIN_RS13915
uniprot id: D3RQL3
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatB/GatE family. GatB subfamily.
messages: Heterotrimer of A, B and C subunits.

572477:ALVIN RS11110
gene id: 572477:ALVIN_RS11110
uniprot id: D3RVY6
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS11770
gene id: 572477:ALVIN_RS11770
uniprot id: D3RMZ1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL4 family.
messages: Forms part of the polypeptide exit tunnel.
messages: One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: Part of the 50S ribosomal subunit.

572477:ALVIN RS14950
gene id: 572477:ALVIN_RS14950
uniprot id: D3RRI6
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.

572477:ALVIN RS04515
gene id: 572477:ALVIN_RS04515
uniprot id: D3RR27
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial diacylglycerol kinase family.
messages: Catalyzes the ATP-dependent phosphorylation of sn-l,2-diacylglycerol (DAG) to phosphatidic acid. Involved in the recycling of diacylglycerol produced as a by-product during membrane-derived oligosaccharide (MDO) biosynthesis.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

572477:ALVIN RS02820
gene id: 572477:ALVIN_RS02820
uniprot id: D3RP08
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS08285
gene id: 572477:ALVIN_RS08285
uniprot id: D3RTU4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PurK/PurT family.
messages: Homodimer.
messages: Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate.

572477:ALVIN RS14545
gene id: 572477:ALVIN_RS14545
uniprot id: D3RRA8
names: Similarity
messages: Belongs to the MotB family.

572477:ALVIN RS08500
gene id: 572477:ALVIN_RS08500
uniprot id: D3RTY9
names: Function
names: Similarity
messages: Belongs to the RecO family.
messages: Involved in DNA repair and RecF pathway recombination.

572477:ALVIN RS11650
gene id: 572477:ALVIN_RS11650
uniprot id: D3RMW6
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL17 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L32.

572477:ALVIN RS00890
gene id: 572477:ALVIN_RS00890
uniprot id: D3RVL9
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

572477:ALVIN RS16050
gene id: 572477:ALVIN_RS16050
uniprot id: D3RWA8
names: Function
names: Similarity
messages: Antitoxin component of a type II toxin-antitoxin (TA) system.
messages: Belongs to the phD/YefM antitoxin family.

572477:ALVIN RS07275
gene id: 572477:ALVIN_RS07275
uniprot id: D3RT98
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LpxH family.
messages: Binds 2 Mn(2+) ions per subunit in a binuclear metal center.
messages: Cell inner membrane
messages: Hydrolyzes the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.

572477:ALVIN RS05080
gene id: 572477:ALVIN_RS05080
uniprot id: D3RRQ9
names: Similarity
messages: Belongs to the peptidase M1 family.

572477:ALVIN RS04345
gene id: 572477:ALVIN_RS04345
uniprot id: D3RQZ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ExbD/TolR family.
messages: Cell membrane

572477:ALVIN RS14065
gene id: 572477:ALVIN_RS14065
uniprot id: D3RQP3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MotA family.
messages: Membrane

572477:ALVIN RS09755
gene id: 572477:ALVIN_RS09755
uniprot id: D3RUM7
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Membrane
messages: Membrane-anchoring subunit of succinate dehydrogenase (SDH).
messages: Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD.

572477:ALVIN RS11335
gene id: 572477:ALVIN_RS11335
uniprot id: D3RMQ5
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Homodimer.

572477:ALVIN RS05025
gene id: 572477:ALVIN_RS05025
uniprot id: D3RRP8
names: Similarity
messages: Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.

572477:ALVIN RS06605
gene id: 572477:ALVIN_RS06605
uniprot id: D3RSW6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YciB family.
messages: Cell inner membrane
messages: Plays a role in cell envelope biogenesis, maintenance of cell envelope integrity and membrane homeostasis.

572477:ALVIN RS12605
gene id: 572477:ALVIN_RS12605
uniprot id: D3RP45
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase RlmH family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.

572477:ALVIN RS03140
gene id: 572477:ALVIN_RS03140
uniprot id: D3RPK0
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.
messages: Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).
messages: The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.
messages: The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1.

572477:ALVIN RS14805
gene id: 572477:ALVIN_RS14805
uniprot id: D3RRF7
names: Similarity
messages: Belongs to the YkuD family.

572477:ALVIN RS06235
gene id: 572477:ALVIN_RS06235
uniprot id: D3RSP2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NrfD family.
messages: Membrane

572477:ALVIN RS05090
gene id: 572477:ALVIN_RS05090
uniprot id: D3RRR1
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
messages: In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS15080
gene id: 572477:ALVIN_RS15080
uniprot id: D3RRL1
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS12410
gene id: 572477:ALVIN_RS12410
uniprot id: D3RNN2
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS16 family.

572477:ALVIN RS10630
gene id: 572477:ALVIN_RS10630
uniprot id: D3RVC2
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS15485
gene id: 572477:ALVIN_RS15485
uniprot id: D3RS69
names: Similarity
names: Subunit
messages: Belongs to the MoaE family.
messages: Heterotetramer of 2 MoaD subunits and 2 MoaE subunits. Also stable as homodimer. The enzyme changes between these two forms during catalysis.

572477:ALVIN RS15260
gene id: 572477:ALVIN_RS15260
uniprot id: D3RS22
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the shikimate kinase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS09920
gene id: 572477:ALVIN_RS09920
uniprot id: D3RUR2
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL9 family.
messages: Binds to the 23S rRNA.

572477:ALVIN RS02995
gene id: 572477:ALVIN_RS02995
uniprot id: P52152
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Rho family.
messages: Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.
messages: Homohexamer. The homohexamer assembles into an open ring structure.

572477:ALVIN RS13275
gene id: 572477:ALVIN_RS13275
uniprot id: D3RPV6
names: Function
names: Similarity
messages: Belongs to the relA/spoT family.
messages: In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.

572477:ALVIN RS05740
gene id: 572477:ALVIN_RS05740
uniprot id: D3RSE0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the KdpC family.
messages: Cell inner membrane
messages: Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.
messages: The system is composed of three essential subunits: KdpA, KdpB and KdpC.

572477:ALVIN RS06555
gene id: 572477:ALVIN_RS06555
uniprot id: D3RSV6
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS03020
gene id: 572477:ALVIN_RS03020
uniprot id: D3RPH7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Homohexamer.
messages: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.
messages: In the N-terminal section; belongs to the CobB/CobQ family.
messages: Involved in acetate metabolism.
messages: The N-terminal region seems to be important for proper quaternary structure. The C-terminal region contains the substrate-binding site.

572477:ALVIN RS12120
gene id: 572477:ALVIN_RS12120
uniprot id: D3RNH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 30 kDa subunit family.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS08145
gene id: 572477:ALVIN_RS08145
uniprot id: D3RTR7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

572477:ALVIN RS03025
gene id: 572477:ALVIN_RS03025
uniprot id: D3RPH8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the acetokinase family.
messages: Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.
messages: Cytoplasm
messages: Homodimer.
messages: Mg(2+). Can also accept Mn(2+).

572477:ALVIN RS10275
gene id: 572477:ALVIN_RS10275
uniprot id: D3RV52
names: Similarity
messages: Belongs to the DNA repair enzymes AP/ExoA family.

572477:ALVIN RS10195
gene id: 572477:ALVIN_RS10195
uniprot id: D3RV37
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRF family.
messages: Cytoplasm
messages: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.

572477:ALVIN RS07910
gene id: 572477:ALVIN_RS07910
uniprot id: D3RTM0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the IspH family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.

572477:ALVIN RS07465
gene id: 572477:ALVIN_RS07465
uniprot id: D3RTD4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HSP33 family.
messages: Cytoplasm
messages: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
messages: Under oxidizing conditions two disulfide bonds are formed involving the reactive cysteines. Under reducing conditions zinc is bound to the reactive cysteines and the protein is inactive.

572477:ALVIN RS13665
gene id: 572477:ALVIN_RS13665
uniprot id: D3RQ34
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
messages: Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.
messages: Homodimer.

572477:ALVIN RS15345
gene id: 572477:ALVIN_RS15345
uniprot id: D3RS38
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MnmG family.
messages: Cytoplasm
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
messages: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.

572477:ALVIN RS05055
gene id: 572477:ALVIN_RS05055
uniprot id: D3RRQ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
messages: Belongs to the KdsB family.
messages: Cytoplasm

572477:ALVIN RS11305
gene id: 572477:ALVIN_RS11305
uniprot id: D3RMP9
names: Cofactor
names: Function
names: PTM
names: Similarity
messages: Activated by phosphorylation.
messages: Belongs to the phosphohexose mutase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.

572477:ALVIN RS09365
gene id: 572477:ALVIN_RS09365
uniprot id: D3RUE8
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS02175
gene id: 572477:ALVIN_RS02175
uniprot id: D3RNB2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transketolase family. DXPS subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).
messages: Homodimer.

572477:ALVIN RS13400
gene id: 572477:ALVIN_RS13400
uniprot id: D3RPY1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the endoribonuclease YbeY family.
messages: Binds 1 zinc ion.
messages: Cytoplasm
messages: Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.

572477:ALVIN RS05250
gene id: 572477:ALVIN_RS05250
uniprot id: D3RRU4
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the QueG family.
messages: Binds 2 [4Fe-4S] clusters per monomer.
messages: Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

572477:ALVIN RS14870
gene id: 572477:ALVIN_RS14870
uniprot id: D3RRH0
names: Function
names: Similarity
messages: Belongs to the relA/spoT family.
messages: In eubacteria ppGpp (guanosine 3'-diphosphate 5'-diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.

572477:ALVIN RS15265
gene id: 572477:ALVIN_RS15265
uniprot id: D3RS23
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
messages: Binds 1 divalent metal cation per subunit. Can use either Co(2+) or Zn(2+).
messages: Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
messages: Cytoplasm

572477:ALVIN RS16750
gene id: 572477:ALVIN_RS16750
uniprot id: D3RW32
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endonuclease Cas1 family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas2 homodimer.

572477:ALVIN RS13610
gene id: 572477:ALVIN_RS13610
uniprot id: D3RQ24
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Homotetramer.
messages: Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.

572477:ALVIN RS14085
gene id: 572477:ALVIN_RS14085
uniprot id: D3RQP7
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS13365
gene id: 572477:ALVIN_RS13365
uniprot id: D3RPX4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrB/RnfD family.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS05410
gene id: 572477:ALVIN_RS05410
uniprot id: Q06530
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Dimer of one cytochrome and one flavoprotein.
messages: Periplasm
messages: Predicted to be exported by the Tat system. The position of the signal peptide cleavage has been experimentally proven.
messages: The active site is a redox-active disulfide bond.

572477:ALVIN RS00305
gene id: 572477:ALVIN_RS00305
uniprot id: P45370
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A large complex of PhaC and PhaE; the ratio of the subunits has been estimated to be from 1:1 to 4:1, with more PhaE than PhaC (PubMed:7957260, PubMed:9888824).
messages: Belongs to the PHA/PHB synthase family. Type III PhaC subfamily.
messages: Cytoplasm
messages: Poly(3-hydroxyalkanoic acids) (PHA), of which PHB is among the most common compounds, has potential uses as a renewable, biodegradable thermoplastic. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation.
messages: Polymerizes D(-)-3-hydroxybutyryl-CoA to create polyhydroxybutyrate (PHB) which consists of thousands of hydroxybutyrate molecules linked end to end (PubMed:7957260). This subunit has catalytic activity that is enhanced 100-fold by PhaE, the non-catalytic subunit (PubMed:9888824).

572477:ALVIN RS03975
gene id: 572477:ALVIN_RS03975
uniprot id: D3RQE3
names: Similarity
messages: Belongs to the GppA/Ppx family.

572477:ALVIN RS04895
gene id: 572477:ALVIN_RS04895
uniprot id: D3RRM5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial histone-like protein family.
messages: Heterodimer of an alpha and a beta chain.
messages: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.

572477:ALVIN RS03915
gene id: 572477:ALVIN_RS03915
uniprot id: D3RQD1
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS07895
gene id: 572477:ALVIN_RS07895
uniprot id: D3RTL8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
messages: Belongs to the RNR ribonuclease family. RNase R subfamily.
messages: Cytoplasm

572477:ALVIN RS06565
gene id: 572477:ALVIN_RS06565
uniprot id: D3RSV8
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS07730
gene id: 572477:ALVIN_RS07730
uniprot id: D3RTI6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Fur family.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS15220
gene id: 572477:ALVIN_RS15220
uniprot id: D3RS14
names: Cofactor
names: Similarity
messages: Belongs to the malic enzymes family.
messages: Divalent metal cations. Prefers magnesium or manganese.

572477:ALVIN RS06805
gene id: 572477:ALVIN_RS06805
uniprot id: D3RT05
names: Function
names: Similarity
names: Subunit
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
messages: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
messages: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate).
messages: Homotetramer.

572477:ALVIN RS03985
gene id: 572477:ALVIN_RS03985
uniprot id: D3RQE5
names: Cofactor
names: Miscellaneous
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: The active site is a redox-active disulfide bond.

572477:ALVIN RS10625
gene id: 572477:ALVIN_RS10625
uniprot id: D3RVC1
names: Similarity
messages: Belongs to the glycosyl hydrolase 13 family.

572477:ALVIN RS13680
gene id: 572477:ALVIN_RS13680
uniprot id: D3RQ37
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GPI family.
messages: Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.
messages: Cytoplasm

572477:ALVIN RS15470
gene id: 572477:ALVIN_RS15470
uniprot id: D3RS66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS05615
gene id: 572477:ALVIN_RS05615
uniprot id: D3RSB5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

572477:ALVIN RS04025
gene id: 572477:ALVIN_RS04025
uniprot id: D3RQF3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the queuine tRNA-ribosyltransferase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).
messages: Homodimer. Within each dimer, one monomer is responsible for RNA recognition and catalysis, while the other monomer binds to the replacement base PreQ1.

572477:ALVIN RS10545
gene id: 572477:ALVIN_RS10545
uniprot id: D3RVA5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.

572477:ALVIN RS14295
gene id: 572477:ALVIN_RS14295
uniprot id: D3RQT9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LipB family.
messages: Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
messages: Cytoplasm
messages: In the reaction, the free carboxyl group of octanoic acid is attached via an amide linkage to the epsilon-amino group of a specific lysine residue of lipoyl domains of lipoate-dependent enzymes.

572477:ALVIN RS14225
gene id: 572477:ALVIN_RS14225
uniprot id: D3RQS5
names: Subcellular Location Annotation
messages: Cytoplasm

572477:ALVIN RS06975
gene id: 572477:ALVIN_RS06975
uniprot id: D3RT39
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS14655
gene id: 572477:ALVIN_RS14655
uniprot id: D3RRC8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FliJ family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS12570
gene id: 572477:ALVIN_RS12570
uniprot id: D3RP38
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. SerB family.

572477:ALVIN RS11700
gene id: 572477:ALVIN_RS11700
uniprot id: D3RMX7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL6 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

572477:ALVIN RS00930
gene id: 572477:ALVIN_RS00930
uniprot id: D3RVM5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GcdB/MmdB/OadB family.
messages: Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.
messages: Cell membrane
messages: Heterotrimer of an alpha, a beta and a gamma subunit.
messages: Membrane

572477:ALVIN RS11330
gene id: 572477:ALVIN_RS11330
uniprot id: D3RMQ4
names: Similarity
messages: Belongs to the peptidase C40 family.

572477:ALVIN RS08985
gene id: 572477:ALVIN_RS08985
uniprot id: D3RU77
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family.

572477:ALVIN RS16110
gene id: 572477:ALVIN_RS16110
uniprot id: D3RWC0
names: Function
names: Similarity
messages: Belongs to the RecD family. RecD-like subfamily.
messages: DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity.

572477:ALVIN RS06740
gene id: 572477:ALVIN_RS06740
uniprot id: D3RSZ3
names: Similarity
messages: Belongs to the CbbQ/NirQ/NorQ/GpvN family.

572477:ALVIN RS05335
gene id: 572477:ALVIN_RS05335
uniprot id: D3RRW1
names: Similarity
messages: Belongs to the CobH/CbiC family.

572477:ALVIN RS06520
gene id: 572477:ALVIN_RS06520
uniprot id: D3RSU9
names: Similarity
messages: Belongs to the HupJ family.

572477:ALVIN RS01670
gene id: 572477:ALVIN_RS01670
uniprot id: D3RN14
names: Function
names: Similarity
messages: Antitoxin component of a type II toxin-antitoxin (TA) system.
messages: Belongs to the phD/YefM antitoxin family.

572477:ALVIN RS16215
gene id: 572477:ALVIN_RS16215
uniprot id: D3RWE5
names: Similarity
messages: Belongs to the HsdR family.

572477:ALVIN RS10750
gene id: 572477:ALVIN_RS10750
uniprot id: D3RVR7
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

572477:ALVIN RS13410
gene id: 572477:ALVIN_RS13410
uniprot id: D3RPY3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the methylthiotransferase family. MiaB subfamily.
messages: Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS04865
gene id: 572477:ALVIN_RS04865
uniprot id: D3RRL9
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS13620
gene id: 572477:ALVIN_RS13620
uniprot id: D3RQ26
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ThiG family.
messages: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
messages: Cytoplasm
messages: Homotetramer. Forms heterodimers with either ThiH or ThiS.

572477:ALVIN RS09425
gene id: 572477:ALVIN_RS09425
uniprot id: D3RUG0
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

572477:ALVIN RS08690
gene id: 572477:ALVIN_RS08690
uniprot id: D3RU24
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the elongation factor P family.
messages: Cytoplasm
messages: Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation.
messages: May be beta-lysylated on the epsilon-amino group of Lys-34 by the combined action of EpmA and EpmB, and then hydroxylated on the C5 position of the same residue by EpmC (if this protein is present). Lysylation is critical for the stimulatory effect of EF-P on peptide-bond formation. The lysylation moiety may extend toward the peptidyltransferase center and stabilize the terminal 3-CCA end of the tRNA. Hydroxylation of the C5 position on Lys-34 may allow additional potential stabilizing hydrogen-bond interactions with the P-tRNA.

572477:ALVIN RS12140
gene id: 572477:ALVIN_RS12140
uniprot id: D3RNH8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SecG family.
messages: Cell membrane
messages: Involved in protein export. Participates in an early event of protein translocation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

572477:ALVIN RS09440
gene id: 572477:ALVIN_RS09440
uniprot id: D3RUG3
names: Function
names: Similarity
messages: Belongs to the HPPK family.
messages: Catalyzes the transfer of pyrophosphate from adenosine triphosphate (ATP) to 6-hydroxymethyl-7,8-dihydropterin, an enzymatic step in folate biosynthesis pathway.

572477:ALVIN RS07515
gene id: 572477:ALVIN_RS07515
uniprot id: D3RTE4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GDT1 family.
messages: Membrane

572477:ALVIN RS13925
gene id: 572477:ALVIN_RS13925
uniprot id: D3RQL5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HisA/HisF family.
messages: Cytoplasm

572477:ALVIN RS05440
gene id: 572477:ALVIN_RS05440
uniprot id: D3RRY3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
messages: Cytoplasm

572477:ALVIN RS06700
gene id: 572477:ALVIN_RS06700
uniprot id: D3RSY5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ClpA/ClpB family.
messages: Cytoplasm
messages: Homohexamer. The oligomerization is ATP-dependent.
messages: Homohexamer; The oligomerization is ATP-dependent.
messages: Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE.

572477:ALVIN RS07045
gene id: 572477:ALVIN_RS07045
uniprot id: D3RT53
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

572477:ALVIN RS06955
gene id: 572477:ALVIN_RS06955
uniprot id: D3RT35
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

572477:ALVIN RS07385
gene id: 572477:ALVIN_RS07385
uniprot id: D3RTB8
names: Similarity
messages: Belongs to the UPF0434 family.

572477:ALVIN RS13050
gene id: 572477:ALVIN_RS13050
uniprot id: D3RPD4
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PurK/PurT family.
messages: Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
messages: Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)- to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS11065
gene id: 572477:ALVIN_RS11065
uniprot id: D3RVX6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ClpS family.
messages: Binds to the N-terminal domain of the chaperone ClpA.
messages: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.

572477:ALVIN RS11080
gene id: 572477:ALVIN_RS11080
uniprot id: D3RVX9
names: Function
names: Similarity
messages: Belongs to the CobB/CobQ family. CobQ subfamily.
messages: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation.

572477:ALVIN RS06510
gene id: 572477:ALVIN_RS06510
uniprot id: D3RSU7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NrfD family.
messages: Membrane

572477:ALVIN RS08375
gene id: 572477:ALVIN_RS08375
uniprot id: D3RTW3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

572477:ALVIN RS07485
gene id: 572477:ALVIN_RS07485
uniprot id: D3RTD8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HflD family.
messages: Cell inner membrane
messages: Cytoplasm

572477:ALVIN RS12090
gene id: 572477:ALVIN_RS12090
uniprot id: D3RNG9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS14395
gene id: 572477:ALVIN_RS14395
uniprot id: D3RQV7
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily. RsmD family.
messages: Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle.

572477:ALVIN RS09265
gene id: 572477:ALVIN_RS09265
uniprot id: D3RUC8
names: Function
messages: Binds zinc. Could be an important component of the zinc-balancing mechanism.

572477:ALVIN RS05280
gene id: 572477:ALVIN_RS05280
uniprot id: D3RRV0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase U32 family. UbiU subfamily.
messages: Forms an heterodimer with UbiV.
messages: Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis. Together with UbiV, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway.

572477:ALVIN RS14430
gene id: 572477:ALVIN_RS14430
uniprot id: D3RQW4
names: Similarity
messages: Belongs to the UPF0235 family.

572477:ALVIN RS00945
gene id: 572477:ALVIN_RS00945
uniprot id: D3RVM8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

572477:ALVIN RS00645
gene id: 572477:ALVIN_RS00645
uniprot id: D3RVH0
names: Function
names: Similarity
messages: Belongs to the transpeptidase family. FtsI subfamily.
messages: Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.

572477:ALVIN RS08110
gene id: 572477:ALVIN_RS08110
uniprot id: D3RTR0
names: Function
names: Similarity
messages: Belongs to the GART family.
messages: Catalyzes the transfer of a formyl group from 10-formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.

572477:ALVIN RS11045
gene id: 572477:ALVIN_RS11045
uniprot id: D3RVX2
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS12820
gene id: 572477:ALVIN_RS12820
uniprot id: D3RP92
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sigma-70 factor family. RpoH subfamily.
messages: Cytoplasm
messages: Interacts with the RNA polymerase core enzyme.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.

572477:ALVIN RS11970
gene id: 572477:ALVIN_RS11970
uniprot id: D3RNE8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY. SRP is a ribonucleoprotein composed of Ffh and a 4.5S RNA molecule.

572477:ALVIN RS05045
gene id: 572477:ALVIN_RS05045
uniprot id: D3RRQ2
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS14575
gene id: 572477:ALVIN_RS14575
uniprot id: D3RRB4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sigma-70 factor family. FliA subfamily.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes.

572477:ALVIN RS12580
gene id: 572477:ALVIN_RS12580
uniprot id: D3RP40
names: Similarity
messages: Belongs to the peptidase U62 family.

572477:ALVIN RS15610
gene id: 572477:ALVIN_RS15610
uniprot id: D3RW19
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CRISPR system Cmr5 family.
messages: Cytoplasm

572477:ALVIN RS00520
gene id: 572477:ALVIN_RS00520
uniprot id: D3RVF0
names: Similarity
messages: Belongs to the HesB/IscA family.

572477:ALVIN RS13170
gene id: 572477:ALVIN_RS13170
uniprot id: D3RPF8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NifH/BchL/ChlL family.
messages: Binds 1 [4Fe-4S] cluster per dimer.
messages: Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
messages: Homodimer. Protochlorophyllide reductase is composed of three subunits; BchL, BchN and BchB.

572477:ALVIN RS07645
gene id: 572477:ALVIN_RS07645
uniprot id: D3RTG9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane

572477:ALVIN RS00155
gene id: 572477:ALVIN_RS00155
uniprot id: D3RUV4
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
messages: Belongs to the type II topoisomerase GyrB family.
messages: Belongs to the type II topoisomerase family.
messages: Cytoplasm
messages: Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.
messages: Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.

572477:ALVIN RS15255
gene id: 572477:ALVIN_RS15255
uniprot id: D3RS21
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial secretin family. PilQ subfamily.
messages: Cell outer membrane
messages: Membrane

572477:ALVIN RS16635
gene id: 572477:ALVIN_RS16635
uniprot id: D3RUC5
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06905
gene id: 572477:ALVIN_RS06905
uniprot id: D3RT25
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06195
gene id: 572477:ALVIN_RS06195
uniprot id: O87897
names: Function
names: Similarity
messages: Belongs to the DsrF/TusC family.
messages: Not known. Could be involved in the oxidation of intracellular sulfur.

572477:ALVIN RS09825
gene id: 572477:ALVIN_RS09825
uniprot id: D3RUP2
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
messages: Cytoplasm
messages: IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).
messages: Monomer.

572477:ALVIN RS12985
gene id: 572477:ALVIN_RS12985
uniprot id: D3RPC1
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: A mutant strain lacking rhd_2599, tusA and dsrE2, although not viable in liquid culture, is clearly sulfur oxidation negative upon growth on solid media containing sulfide, and shows massive accumulation of intercellular sulfur globules.
messages: Cell membrane
messages: Sulfur carrier protein probably involved in sulfur trafficking for oxidative dissimilatory sulfur metabolism. May be a component of a cytoplasmic sulfur relay system delivering sulfur to DsrC. Binds sulfur in the presence of sulfide in vitro.
messages: Up-regulated under sulfur-oxidizing conditions (at mRNA level), i.e. when grown on reduced sulfur compounds such as sulfide, thiosulfate or elemental sulfur.

572477:ALVIN RS16430
gene id: 572477:ALVIN_RS16430
uniprot id: D3RNA0
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS07790
gene id: 572477:ALVIN_RS07790
uniprot id: D3RTJ8
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CheB family.
messages: Contains a C-terminal catalytic domain, and an N-terminal region which modulates catalytic activity.
messages: Cytoplasm
messages: Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid.
messages: Phosphorylated by CheA. Phosphorylation of the N-terminal regulatory domain activates the methylesterase activity.

572477:ALVIN RS08235
gene id: 572477:ALVIN_RS08235
uniprot id: D3RTT5
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS12710
gene id: 572477:ALVIN_RS12710
uniprot id: D3RP68
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS15090
gene id: 572477:ALVIN_RS15090
uniprot id: D3RRL3
names: Similarity
messages: Belongs to the peptidase S41A family.

572477:ALVIN RS15410
gene id: 572477:ALVIN_RS15410
uniprot id: D3RS51
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the uroporphyrinogen decarboxylase family.
messages: Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS06660
gene id: 572477:ALVIN_RS06660
uniprot id: D3RSX7
names: Function
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family. T3SS ATPase subfamily.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit.

572477:ALVIN RS07540
gene id: 572477:ALVIN_RS07540
uniprot id: D3RTE9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
messages: Cell inner membrane
messages: Membrane
messages: Probable transporter of a GTP-driven Fe(2+) uptake system.

572477:ALVIN RS09225
gene id: 572477:ALVIN_RS09225
uniprot id: D3RUC1
names: Cofactor
names: Function
names: Similarity
messages: Adenine glycosylase active on G-A mispairs. MutY also corrects error-prone DNA synthesis past GO lesions which are due to the oxidatively damaged form of guanine: 7,8-dihydro-8-oxoguanine (8-oxo-dGTP).
messages: Belongs to the Nth/MutY family.
messages: Binds 1 [4Fe-4S] cluster.

572477:ALVIN RS13360
gene id: 572477:ALVIN_RS13360
uniprot id: D3RPX3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell inner membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS12980
gene id: 572477:ALVIN_RS12980
uniprot id: D3RPC0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A mutant strain lacking rhd_2599, tusA and dsrE2, although not viable in liquid culture, is clearly sulfur oxidation negative upon growth on solid media containing sulfide, and shows massive accumulation of intercellular sulfur globules.
messages: Belongs to the sulfur carrier protein TusA family.
messages: Cytoplasm
messages: Mostly a monomer, a small portion forms homodimer via intermolecular disulfide bonds. Tightly interacts with DsrEFH.
messages: Sulfur carrier protein involved in sulfur trafficking for oxidative dissimilatory sulfur metabolism. Component of a sulfur relay system that starts with the sulfur-mobilizing rhodanese-like protein Rhd_2599 (Alvin_2599), which transfers the sulfur from a low-molecular-weight thiol, maybe glutathione, to the TusA protein (Alvin_2600); TusA serves as the sulfur donor for DsrEFH, which persulfurates DsrC; persulfurated DsrC very probably serves as a direct substrate for reverse-acting sulfite reductase, DsrAB. TusA seems to be not exclusively dedicated to sulfur oxidation and may have other important roles in the cell. Might also act as a sulfur mediator required for 2-thiouridine formation of tRNA.
messages: Up-regulated under sulfur-oxidizing conditions (at mRNA level), i.e. when grown on reduced sulfur compounds such as sulfide, thiosulfate or elemental sulfur (PubMed:24648525). TusA is one of the major proteins in A.vinosum cells grown on malate or on reduced sulfur compounds (PubMed:24487535).

572477:ALVIN RS04230
gene id: 572477:ALVIN_RS04230
uniprot id: D3RQJ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

572477:ALVIN RS14440
gene id: 572477:ALVIN_RS14440
uniprot id: D3RQW6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pyrroline-5-carboxylate reductase family.
messages: Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
messages: Cytoplasm

572477:ALVIN RS15305
gene id: 572477:ALVIN_RS15305
uniprot id: D3RS31
names: Similarity
names: Subunit
messages: Belongs to the ALAD family.
messages: Homooctamer.

572477:ALVIN RS12125
gene id: 572477:ALVIN_RS12125
uniprot id: D3RNH6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Cell inner membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS01885
gene id: 572477:ALVIN_RS01885
uniprot id: D3RN55
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

572477:ALVIN RS11500
gene id: 572477:ALVIN_RS11500
uniprot id: D3RMT7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
messages: Cell membrane
messages: Heterodimer of a large and a small subunit.

572477:ALVIN RS00075
gene id: 572477:ALVIN_RS00075
uniprot id: D3RUT7
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS14875
gene id: 572477:ALVIN_RS14875
uniprot id: D3RRH1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

572477:ALVIN RS04140
gene id: 572477:ALVIN_RS04140
uniprot id: D3RQH7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PNT beta subunit family.
messages: Cell inner membrane
messages: Heterodimer of an alpha and a beta chain.
messages: Membrane
messages: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.

572477:ALVIN RS01595
gene id: 572477:ALVIN_RS01595
uniprot id: D3RMM3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit.
messages: Binds 2 divalent ions per subunit.
messages: Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.

572477:ALVIN RS11875
gene id: 572477:ALVIN_RS11875
uniprot id: D3RN08
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OmpP1/FadL family.
messages: Cell outer membrane
messages: Membrane

572477:ALVIN RS06155
gene id: 572477:ALVIN_RS06155
uniprot id: D3RSM6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
messages: Membrane

572477:ALVIN RS00720
gene id: 572477:ALVIN_RS00720
uniprot id: D3RVI5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecA family.
messages: Cell inner membrane
messages: Cytoplasm
messages: Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.

572477:ALVIN RS01360
gene id: 572477:ALVIN_RS01360
uniprot id: D3RMH6
names: Function
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
messages: Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

572477:ALVIN RS06045
gene id: 572477:ALVIN_RS06045
uniprot id: D3RSK4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the Hfq family.
messages: Homohexamer.
messages: RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs.

572477:ALVIN RS09145
gene id: 572477:ALVIN_RS09145
uniprot id: D3RUA8
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaG primase family.
messages: Binds 1 zinc ion per monomer.
messages: Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.
messages: Monomer. Interacts with DnaB.
messages: RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.

572477:ALVIN RS05300
gene id: 572477:ALVIN_RS05300
uniprot id: D3RRV4
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS00700
gene id: 572477:ALVIN_RS00700
uniprot id: D3RVI1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsZ family.
messages: Cytoplasm
messages: Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
messages: Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins.

572477:ALVIN RS14270
gene id: 572477:ALVIN_RS14270
uniprot id: D3RQT4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEDS family. MrdB/RodA subfamily.
messages: Cell inner membrane
messages: Membrane
messages: Peptidoglycan polymerase that is essential for cell wall elongation.

572477:ALVIN RS04035
gene id: 572477:ALVIN_RS04035
uniprot id: D3RQF5
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
messages: Periplasm
messages: The PPIase activity resides only in the second parvulin domain. The N-terminal region and the C-terminal tail are necessary and sufficient for the chaperone activity of SurA. The PPIase activity is dispensable for SurA to function as a chaperone. The N-terminal region and the C-terminal tail are also required for porin recognition.

572477:ALVIN RS05095
gene id: 572477:ALVIN_RS05095
uniprot id: D3RRR2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the trans-sulfuration enzymes family. MetZ subfamily.
messages: Catalyzes the formation of L-homocysteine from O-succinyl-L-homoserine (OSHS) and hydrogen sulfide.
messages: Homotetramer.

572477:ALVIN RS06340
gene id: 572477:ALVIN_RS06340
uniprot id: D3RSR3
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 3 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS07570
gene id: 572477:ALVIN_RS07570
uniprot id: D3RTF5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0718 family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS04690
gene id: 572477:ALVIN_RS04690
uniprot id: D3RR61
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

572477:ALVIN RS02450
gene id: 572477:ALVIN_RS02450
uniprot id: D3RNT8
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: Cell inner membrane
messages: Homohexamer.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the central section; belongs to the AAA ATPase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS04350
gene id: 572477:ALVIN_RS04350
uniprot id: D3RQZ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exbB/tolQ family.
messages: Membrane

572477:ALVIN RS07470
gene id: 572477:ALVIN_RS07470
uniprot id: D3RTD5
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

572477:ALVIN RS05575
gene id: 572477:ALVIN_RS05575
uniprot id: D3RSA7
names: Function
names: Similarity
messages: Belongs to the APS kinase family.
messages: Catalyzes the synthesis of activated sulfate.

572477:ALVIN RS11615
gene id: 572477:ALVIN_RS11615
uniprot id: D3RMW0
names: Similarity
messages: Belongs to the metallophosphoesterase superfamily. YfcE family.

572477:ALVIN RS09065
gene id: 572477:ALVIN_RS09065
uniprot id: D3RU92
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
messages: Membrane

572477:ALVIN RS11405
gene id: 572477:ALVIN_RS11405
uniprot id: D3RMR9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LapB family.
messages: Cell inner membrane
messages: Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane.

572477:ALVIN RS09725
gene id: 572477:ALVIN_RS09725
uniprot id: D3RUM1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
messages: Binds 1 pyridoxal phosphate per subunit.
messages: Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS12740
gene id: 572477:ALVIN_RS12740
uniprot id: D3RP75
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
messages: Belongs to the antenna complex beta subunit family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS12480
gene id: 572477:ALVIN_RS12480
uniprot id: D3RNP6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS01680
gene id: 572477:ALVIN_RS01680
uniprot id: D3RN16
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS07020
gene id: 572477:ALVIN_RS07020
uniprot id: D3RT48
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the anaerobic coproporphyrinogen-III oxidase family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Cytoplasm
messages: Involved in the heme biosynthesis. Catalyzes the anaerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen III to yield the vinyl groups in protoporphyrinogen IX.
messages: Monomer.

572477:ALVIN RS14460
gene id: 572477:ALVIN_RS14460
uniprot id: D3RQX0
names: Subcellular Location Annotation
messages: Cell outer membrane
messages: Membrane

572477:ALVIN RS12225
gene id: 572477:ALVIN_RS12225
uniprot id: D3RNJ5
names: Similarity
messages: Belongs to the PAPS reductase family. CysD subfamily.

572477:ALVIN RS15330
gene id: 572477:ALVIN_RS15330
uniprot id: D3RS36
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS04570
gene id: 572477:ALVIN_RS04570
uniprot id: D3RR38
names: Function
names: Similarity
messages: ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.

572477:ALVIN RS14475
gene id: 572477:ALVIN_RS14475
uniprot id: D3RR95
names: Function
names: Similarity
names: Subunit
messages: Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
messages: Belongs to the ZapA family. Type 1 subfamily.
messages: Homodimer. Interacts with FtsZ.

572477:ALVIN RS13795
gene id: 572477:ALVIN_RS13795
uniprot id: D3RQ60
names: Similarity
messages: Belongs to the PTPS family. QueD subfamily.

572477:ALVIN RS06995
gene id: 572477:ALVIN_RS06995
uniprot id: D3RT43
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family.
messages: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
messages: Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

572477:ALVIN RS14660
gene id: 572477:ALVIN_RS14660
uniprot id: D3RRC9
names: Subcellular Location Annotation
messages: Cytoplasm

572477:ALVIN RS02565
gene id: 572477:ALVIN_RS02565
uniprot id: D3RNW1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CbiQ family.
messages: Membrane

572477:ALVIN RS05015
gene id: 572477:ALVIN_RS05015
uniprot id: D3RRP6
names: Similarity
messages: Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.

572477:ALVIN RS13355
gene id: 572477:ALVIN_RS13355
uniprot id: D3RPX2
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
messages: Binds 3 [4Fe-4S] clusters.
messages: Cell inner membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS00950
gene id: 572477:ALVIN_RS00950
uniprot id: D3RVM9
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

572477:ALVIN RS09355
gene id: 572477:ALVIN_RS09355
uniprot id: D3RUE6
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the NifH/BchL/ChlL family.
messages: Binds 1 [4Fe-4S] cluster per dimer.
messages: Homodimer.
messages: The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
messages: The reversible ADP-ribosylation of Arg inactivates the nitrogenase reductase and regulates nitrogenase activity.
messages: The reversible ADP-ribosylation of Arg-101 inactivates the nitrogenase reductase and regulates nitrogenase activity.

572477:ALVIN RS02610
gene id: 572477:ALVIN_RS02610
uniprot id: D3RNX0
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily.
messages: Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.

572477:ALVIN RS03945
gene id: 572477:ALVIN_RS03945
uniprot id: D3RQD7
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

572477:ALVIN RS11280
gene id: 572477:ALVIN_RS11280
uniprot id: D3RMP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.
messages: Membrane

572477:ALVIN RS12130
gene id: 572477:ALVIN_RS12130
uniprot id: D3RNH7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell inner membrane
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

572477:ALVIN RS01375
gene id: 572477:ALVIN_RS01375
uniprot id: D3RMH9
names: Function
names: Similarity
messages: Belongs to the RlpA family.
messages: Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.

572477:ALVIN RS07920
gene id: 572477:ALVIN_RS07920
uniprot id: D3RTM2
names: Similarity
messages: Belongs to the folylpolyglutamate synthase family.

572477:ALVIN RS07955
gene id: 572477:ALVIN_RS07955
uniprot id: D3RTM9
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the aspartate-semialdehyde dehydrogenase family.
messages: Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS12400
gene id: 572477:ALVIN_RS12400
uniprot id: D3RNN0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase TrmD family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates guanosine-37 in various tRNAs.

572477:ALVIN RS00615
gene id: 572477:ALVIN_RS00615
uniprot id: D3RVG4
names: Similarity
messages: Belongs to the UPF0102 family.

572477:ALVIN RS07930
gene id: 572477:ALVIN_RS07930
uniprot id: D3RTM4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TrpA family.
messages: Tetramer of two alpha and two beta chains.
messages: The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.

572477:ALVIN RS03090
gene id: 572477:ALVIN_RS03090
uniprot id: D3RPJ0
names: Function
names: Similarity
messages: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily.
messages: Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 2-succinylbenzoate (OSB).

572477:ALVIN RS07225
gene id: 572477:ALVIN_RS07225
uniprot id: D3RT88
names: Similarity
messages: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.

572477:ALVIN RS06540
gene id: 572477:ALVIN_RS06540
uniprot id: O52055
names: Function
names: Similarity
names: Subunit
messages: Structural protein of the sulfur globules, which are intracellular globules that serve for sulfur storage in purple sulfur bacteria.
messages: The protein envelope of the sulfur globules is composed of the three different proteins CV1, CV2 and CV3.
messages: To T.roseopersicina TR2.

572477:ALVIN RS02085
gene id: 572477:ALVIN_RS02085
uniprot id: D3RN94
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaX/STICHEL family.
messages: DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.

572477:ALVIN RS09845
gene id: 572477:ALVIN_RS09845
uniprot id: D3RUP6
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06835
gene id: 572477:ALVIN_RS06835
uniprot id: D3RT11
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GrpE family.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.

572477:ALVIN RS07445
gene id: 572477:ALVIN_RS07445
uniprot id: D3RTD0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Heterotetramer of two alpha and two beta subunits.
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.

572477:ALVIN RS09890
gene id: 572477:ALVIN_RS09890
uniprot id: D3RUQ5
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS10300
gene id: 572477:ALVIN_RS10300
uniprot id: D3RV56
names: Similarity
messages: Belongs to the YkuD family.

572477:ALVIN RS02950
gene id: 572477:ALVIN_RS02950
uniprot id: D3RPG3
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS13820
gene id: 572477:ALVIN_RS13820
uniprot id: D3RQ65
names: Similarity
messages: Belongs to the DEAD box helicase family.

572477:ALVIN RS10725
gene id: 572477:ALVIN_RS10725
uniprot id: D3RVR2
names: Similarity
messages: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family.

572477:ALVIN RS11660
gene id: 572477:ALVIN_RS11660
uniprot id: D3RMW8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

572477:ALVIN RS09965
gene id: 572477:ALVIN_RS09965
uniprot id: D3RUS1
names: Similarity
messages: Belongs to the YkuD family.

572477:ALVIN RS17455
gene id: 572477:ALVIN_RS17455
uniprot id: D3RN39
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS06025
gene id: 572477:ALVIN_RS06025
uniprot id: D3RSK0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TsaE family.
messages: Cytoplasm

572477:ALVIN RS01625
gene id: 572477:ALVIN_RS01625
uniprot id: D3RMM9
names: Function
names: Similarity
messages: Belongs to the PINc/VapC protein family.
messages: Toxic component of a toxin-antitoxin (TA) system. An RNase.

572477:ALVIN RS01610
gene id: 572477:ALVIN_RS01610
uniprot id: D3RMM6
names: Similarity
messages: Belongs to the methylenetetrahydrofolate reductase family.

572477:ALVIN RS13730
gene id: 572477:ALVIN_RS13730
uniprot id: P22860
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: In C.vinosum two similar set of genes code for RuBisCO large and small chains: the RbcL-RbcS (this entry) and the RbcA-RbcB pair. Under standard photoautotrophic culture conditions only the latter pair seems active, the former being probably cryptic.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.

572477:ALVIN RS15225
gene id: 572477:ALVIN_RS15225
uniprot id: D3RS15
names: Similarity
messages: Belongs to the citrate synthase family.

572477:ALVIN RS13955
gene id: 572477:ALVIN_RS13955
uniprot id: D3RQM1
names: Similarity
messages: Belongs to the HypE family.

572477:ALVIN RS02180
gene id: 572477:ALVIN_RS02180
uniprot id: D3RNB3
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS08505
gene id: 572477:ALVIN_RS08505
uniprot id: D3RTZ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
messages: Cell inner membrane
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS08025
gene id: 572477:ALVIN_RS08025
uniprot id: D3RTP3
names: Similarity
messages: Belongs to the asparagine synthetase family.

572477:ALVIN RS02500
gene id: 572477:ALVIN_RS02500
uniprot id: D3RNU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NusA family.
messages: Cytoplasm
messages: Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.
messages: Participates in both transcription termination and antitermination.

572477:ALVIN RS02165
gene id: 572477:ALVIN_RS02165
uniprot id: D3RNB0
names: Similarity
messages: In the N-terminal section; belongs to the phytochrome family.

572477:ALVIN RS08175
gene id: 572477:ALVIN_RS08175
uniprot id: D3RTS3
names: Similarity
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Homodimer.

572477:ALVIN RS13105
gene id: 572477:ALVIN_RS13105
uniprot id: D3RPE4
names: Function
names: Similarity
messages: Belongs to the phenylacetyl-CoA ligase family.
messages: Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).

572477:ALVIN RS10345
gene id: 572477:ALVIN_RS10345
uniprot id: D3RV65
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
messages: Cytoplasm
messages: Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.

572477:ALVIN RS13685
gene id: 572477:ALVIN_RS13685
uniprot id: D3RQ38
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

572477:ALVIN RS06105
gene id: 572477:ALVIN_RS06105
uniprot id: D3RSL6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS14910
gene id: 572477:ALVIN_RS14910
uniprot id: D3RRH8
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.
messages: Belongs to the azoreductase type 1 family.
messages: Binds 1 FMN per subunit.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones.

572477:ALVIN RS14435
gene id: 572477:ALVIN_RS14435
uniprot id: D3RQW5
names: Similarity
messages: Belongs to the YggT family.

572477:ALVIN RS02800
gene id: 572477:ALVIN_RS02800
uniprot id: D3RP04
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell inner membrane
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS08925
gene id: 572477:ALVIN_RS08925
uniprot id: D3RU64
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GtrA family.
messages: Membrane

572477:ALVIN RS03440
gene id: 572477:ALVIN_RS03440
uniprot id: D3RPR0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein (AccB), biotin carboxylase (AccC) and two subunits each of ACCase subunit alpha (AccA) and ACCase subunit beta (AccD).
messages: Belongs to the AccA family.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
messages: Cytoplasm

572477:ALVIN RS04225
gene id: 572477:ALVIN_RS04225
uniprot id: D3RQJ4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Cytoplasm
messages: Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.
messages: Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.

572477:ALVIN RS15465
gene id: 572477:ALVIN_RS15465
uniprot id: D3RS65
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS09775
gene id: 572477:ALVIN_RS09775
uniprot id: D3RUN1
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.

572477:ALVIN RS15475
gene id: 572477:ALVIN_RS15475
uniprot id: D3RS67
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.
messages: Cell membrane
messages: Membrane

572477:ALVIN RS08495
gene id: 572477:ALVIN_RS08495
uniprot id: D3RTY8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PNP synthase family.
messages: Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
messages: Cytoplasm
messages: Homooctamer; tetramer of dimers.

572477:ALVIN RS15855
gene id: 572477:ALVIN_RS15855
uniprot id: D3RW68
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M15D family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.

572477:ALVIN RS11665
gene id: 572477:ALVIN_RS11665
uniprot id: D3RMW9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

572477:ALVIN RS01695
gene id: 572477:ALVIN_RS01695
uniprot id: D3RN19
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PqiA family.
messages: Membrane

572477:ALVIN RS03990
gene id: 572477:ALVIN_RS03990
uniprot id: D3RQE6
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Forms a 24-polypeptide structural core with octahedral symmetry.
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).

572477:ALVIN RS01525
gene id: 572477:ALVIN_RS01525
uniprot id: D3RMK9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UbiD family.
messages: Binds 1 prenylated FMN (prenyl-FMN) per subunit.
messages: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.
messages: Cell membrane
messages: Homohexamer.

572477:ALVIN RS09405
gene id: 572477:ALVIN_RS09405
uniprot id: D3RUF6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.
messages: Homotetramer.

572477:ALVIN RS04555
gene id: 572477:ALVIN_RS04555
uniprot id: D3RR35
names: Function
names: Similarity
names: Subunit
messages: Belongs to the LptE lipoprotein family.
messages: Component of the lipopolysaccharide transport and assembly complex. Interacts with LptD.
messages: Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.

572477:ALVIN RS02210
gene id: 572477:ALVIN_RS02210
uniprot id: D3RNB9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
messages: Cytoplasm
messages: Monomer.

572477:ALVIN RS16745
gene id: 572477:ALVIN_RS16745
uniprot id: D3RW31
names: Function
names: Similarity
names: Subunit
messages: Belongs to the CRISPR-associated endoribonuclease Cas2 protein family.
messages: CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
messages: Homodimer, forms a heterotetramer with a Cas1 homodimer.

572477:ALVIN RS09625
gene id: 572477:ALVIN_RS09625
uniprot id: D3RUK0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
messages: Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.
messages: Homodimer.

572477:ALVIN RS13755
gene id: 572477:ALVIN_RS13755
uniprot id: D3RQ52
names: Function
names: Similarity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Synthesizes alpha-1,4-glucan chains using ADP-glucose.

572477:ALVIN RS01365
gene id: 572477:ALVIN_RS01365
uniprot id: D3RMH7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the ribulose-phosphate 3-epimerase family.
messages: Binds 1 divalent metal cation per subunit.
messages: Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.

572477:ALVIN RS14140
gene id: 572477:ALVIN_RS14140
uniprot id: D3RQQ8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EPSP synthase family. MurA subfamily.
messages: Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS08540
gene id: 572477:ALVIN_RS08540
uniprot id: D3RTZ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RseB family.
messages: Periplasm

572477:ALVIN RS14050
gene id: 572477:ALVIN_RS14050
uniprot id: D3RQP0
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS13790
gene id: 572477:ALVIN_RS13790
uniprot id: D3RQ59
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the radical SAM superfamily. 7-carboxy-7-deazaguanine synthase family.
messages: Binds 1 S-adenosyl-L-methionine per subunit.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
messages: Homodimer.

572477:ALVIN RS11265
gene id: 572477:ALVIN_RS11265
uniprot id: D3RMP1
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the vitamin-B12 independent methionine synthase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation.

572477:ALVIN RS11915
gene id: 572477:ALVIN_RS11915
uniprot id: D3RND8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic/mitochondrial release factor family.
messages: Cytoplasm
messages: Methylated by PrmC. Methylation increases the termination efficiency of RF1.
messages: Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.

572477:ALVIN RS10155
gene id: 572477:ALVIN_RS10155
uniprot id: D3RV29
names: Similarity
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family.
messages: Heterodimer of a large and a small subunit.

572477:ALVIN RS03115
gene id: 572477:ALVIN_RS03115
uniprot id: D3RPJ5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TPP enzyme family. MenD subfamily.
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).
messages: Homodimer.

572477:ALVIN RS01740
gene id: 572477:ALVIN_RS01740
uniprot id: D3RN27
names: Function
names: Similarity
messages: Belongs to the NadC/ModD family.
messages: Involved in the catabolism of quinolinic acid (QA).

572477:ALVIN RS13060
gene id: 572477:ALVIN_RS13060
uniprot id: D3RPD6
names: Similarity
messages: Belongs to the GSP E family.

572477:ALVIN RS02270
gene id: 572477:ALVIN_RS02270
uniprot id: D3RND2
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

572477:ALVIN RS05395
gene id: 572477:ALVIN_RS05395
uniprot id: D3RRX3
names: Function
names: Similarity
messages: Belongs to the MurCDEF family. Mpl subfamily.
messages: Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramate.

572477:ALVIN RS01915
gene id: 572477:ALVIN_RS01915
uniprot id: D3RN61
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase H family.
messages: Binds 1 Mg(2+) ion per subunit. May bind a second metal ion at a regulatory site, or after substrate binding.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
messages: Monomer.

572477:ALVIN RS13935
gene id: 572477:ALVIN_RS13935
uniprot id: D3RQL7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRA-PH family.
messages: Cytoplasm

572477:ALVIN RS16100
gene id: 572477:ALVIN_RS16100
uniprot id: D3RWB8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
messages: Mediates influx of magnesium ions.
messages: Membrane

572477:ALVIN RS14105
gene id: 572477:ALVIN_RS14105
uniprot id: D3RQQ1
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.

572477:ALVIN RS02315
gene id: 572477:ALVIN_RS02315
uniprot id: D3RNR5
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS10805
gene id: 572477:ALVIN_RS10805
uniprot id: D3RVS7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SoxA family.
messages: Binds 1 heme group per subunit.
messages: Binds 2 heme groups per subunit.
messages: C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the intermediary formation of conspicuous sulfur globules inside of the cells.
messages: Heterodimer of SoxA and SoxX.
messages: Periplasm

572477:ALVIN RS11235
gene id: 572477:ALVIN_RS11235
uniprot id: D3RW10
names: Similarity
messages: Belongs to the FeoA family.

572477:ALVIN RS11780
gene id: 572477:ALVIN_RS11780
uniprot id: D3RMZ3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

572477:ALVIN RS07960
gene id: 572477:ALVIN_RS07960
uniprot id: D3RTN0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS14450
gene id: 572477:ALVIN_RS14450
uniprot id: D3RQW8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HAM1 NTPase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.
messages: Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.

572477:ALVIN RS10480
gene id: 572477:ALVIN_RS10480
uniprot id: D3RV92
names: Function
names: Similarity
messages: Acts on leucine, isoleucine and valine.
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.

572477:ALVIN RS14600
gene id: 572477:ALVIN_RS14600
uniprot id: D3RRB9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum basal body
messages: Belongs to the FliR/MopE/SpaR family.
messages: Cell membrane
messages: Membrane
messages: Role in flagellar biosynthesis.

572477:ALVIN RS12860
gene id: 572477:ALVIN_RS12860
uniprot id: D3RP95
names: Similarity
messages: Belongs to the PucC family.

572477:ALVIN RS10315
gene id: 572477:ALVIN_RS10315
uniprot id: D3RV59
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type IA topoisomerase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.
messages: Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.

572477:ALVIN RS09350
gene id: 572477:ALVIN_RS09350
uniprot id: D3RUE5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NifD/NifK/NifE/NifN family.
messages: Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2).
messages: This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation.

572477:ALVIN RS10015
gene id: 572477:ALVIN_RS10015
uniprot id: D3RV07
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
messages: Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA.

572477:ALVIN RS09560
gene id: 572477:ALVIN_RS09560
uniprot id: D3RUI7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
messages: Cytoplasm

572477:ALVIN RS07355
gene id: 572477:ALVIN_RS07355
uniprot id: D3RTB3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DNA polymerase type-A family.
messages: In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
messages: Single-chain monomer with multiple functions.

572477:ALVIN RS06265
gene id: 572477:ALVIN_RS06265
uniprot id: D3RSP8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0719 family.
messages: Membrane

572477:ALVIN RS03960
gene id: 572477:ALVIN_RS03960
uniprot id: D3RQE0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the polypeptide deformylase family.
messages: Binds 1 Fe(2+) ion.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.

572477:ALVIN RS06630
gene id: 572477:ALVIN_RS06630
uniprot id: D3RSX1
names: Similarity
messages: In the N-terminal section; belongs to the phytochrome family.

572477:ALVIN RS10495
gene id: 572477:ALVIN_RS10495
uniprot id: D3RV95
names: Similarity
messages: Belongs to the PEP-utilizing enzyme family.

572477:ALVIN RS04660
gene id: 572477:ALVIN_RS04660
uniprot id: D3RR55
names: Similarity
messages: Belongs to the CFA/CMAS family.

572477:ALVIN RS09700
gene id: 572477:ALVIN_RS09700
uniprot id: D3RUL6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Bacterial flagellum
messages: Belongs to the bacterial flagellin family.
messages: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
messages: Secreted

572477:ALVIN RS11755
gene id: 572477:ALVIN_RS11755
uniprot id: D3RMY8
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

572477:ALVIN RS00795
gene id: 572477:ALVIN_RS00795
uniprot id: D3RVK0
names: Cofactor
names: Function
messages: Binds 2 [4Fe-4S] clusters.
messages: Component of a complex that catalyzes the oxidation of glycolate to glyoxylate.

572477:ALVIN RS12255
gene id: 572477:ALVIN_RS12255
uniprot id: D3RNK1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the formate dehydrogenase gamma subunit family.
messages: Membrane

572477:ALVIN RS01830
gene id: 572477:ALVIN_RS01830
uniprot id: D3RN44
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 'phage' integrase family. XerD subfamily.
messages: Cytoplasm
messages: Forms a cyclic heterotetrameric complex composed of two molecules of XerC and two molecules of XerD.
messages: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.

572477:ALVIN RS10995
gene id: 572477:ALVIN_RS10995
uniprot id: D3RVW3
names: Similarity
messages: Belongs to the YkuD family.

572477:ALVIN RS11705
gene id: 572477:ALVIN_RS11705
uniprot id: D3RMX8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

572477:ALVIN RS03740
gene id: 572477:ALVIN_RS03740
uniprot id: D3RQ96
names: Similarity
messages: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.

572477:ALVIN RS01295
gene id: 572477:ALVIN_RS01295
uniprot id: D3RMG4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS09540
gene id: 572477:ALVIN_RS09540
uniprot id: D3RUI3
names: Similarity
messages: Belongs to the glutaredoxin family. Monothiol subfamily.

572477:ALVIN RS13760
gene id: 572477:ALVIN_RS13760
uniprot id: D3RQ53
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PanD family.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
messages: Cytoplasm
messages: Heterooctamer of four alpha and four beta subunits.
messages: Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus.

572477:ALVIN RS00420
gene id: 572477:ALVIN_RS00420
uniprot id: D3RVD0
names: Function
names: Similarity
messages: Belongs to the AAA ATPase family. RarA/MGS1/WRNIP1 subfamily.
messages: DNA-dependent ATPase that plays important roles in cellular responses to stalled DNA replication processes.

572477:ALVIN RS00245
gene id: 572477:ALVIN_RS00245
uniprot id: D3RUX2
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS06500
gene id: 572477:ALVIN_RS06500
uniprot id: D3RSU5
names: Similarity
messages: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.

572477:ALVIN RS02525
gene id: 572477:ALVIN_RS02525
uniprot id: D3RNV3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the polyribonucleotide nucleotidyltransferase family.
messages: Component of the RNA degradosome, which is a multiprotein complex involved in RNA processing and mRNA degradation.
messages: Cytoplasm
messages: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.

572477:ALVIN RS06400
gene id: 572477:ALVIN_RS06400
uniprot id: D3RSS5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: Membrane

572477:ALVIN RS02790
gene id: 572477:ALVIN_RS02790
uniprot id: D3RP02
names: Similarity
messages: Belongs to the phosphoribulokinase family.

572477:ALVIN RS05265
gene id: 572477:ALVIN_RS05265
uniprot id: D3RRU7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP transporter small permease family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
messages: The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins.

572477:ALVIN RS10640
gene id: 572477:ALVIN_RS10640
uniprot id: D3RVP3
names: Similarity
messages: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.

572477:ALVIN RS12150
gene id: 572477:ALVIN_RS12150
uniprot id: D3RNI0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SmpB family.
messages: Cytoplasm
messages: Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.

572477:ALVIN RS07095
gene id: 572477:ALVIN_RS07095
uniprot id: D3RT61
names: Similarity
messages: Belongs to the Dps family.

572477:ALVIN RS04540
gene id: 572477:ALVIN_RS04540
uniprot id: D3RR32
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GcvT family.
messages: The glycine cleavage system catalyzes the degradation of glycine.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

572477:ALVIN RS12440
gene id: 572477:ALVIN_RS12440
uniprot id: D3RNN8
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Binds 1 molybdenum-bis(molybdopterin guanine dinucleotide) (Mo-bis-MGD) cofactor per subunit.
messages: Cell inner membrane
messages: Deletion of the gene causes a strong decrease in sulfite oxidation rate.
messages: Forms a heterotrimeric membrane-bound complex composed of a catalytic heterodimer (SoeAB) and a membrane anchor protein (SoeC).
messages: Part of the SoeABC complex that catalyzes the oxidation of sulfite to sulfate.

572477:ALVIN RS00940
gene id: 572477:ALVIN_RS00940
uniprot id: D3RVM7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OadG family.
messages: Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.
messages: Cell membrane
messages: Heterotrimer of an alpha, a beta and a gamma subunit.
messages: Membrane

572477:ALVIN RS11325
gene id: 572477:ALVIN_RS11325
uniprot id: P00260
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the high-potential iron-sulfur protein (HiPIP) family.
messages: Homodimer.
messages: Periplasm
messages: Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria.

572477:ALVIN RS03260
gene id: 572477:ALVIN_RS03260
uniprot id: D3RPM4
names: Function
names: Similarity
messages: Belongs to the aspartate/glutamate racemases family.
messages: Provides the (R)-glutamate required for cell wall biosynthesis.

572477:ALVIN RS02035
gene id: 572477:ALVIN_RS02035
uniprot id: D3RN84
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ferrochelatase family.
messages: Catalyzes the ferrous insertion into protoporphyrin IX.
messages: Cytoplasm

572477:ALVIN RS14060
gene id: 572477:ALVIN_RS14060
uniprot id: D3RQP2
names: Cofactor
names: Similarity
messages: Belongs to the UPF0313 family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.

572477:ALVIN RS00600
gene id: 572477:ALVIN_RS00600
uniprot id: D3RVG1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PEP-utilizing enzyme family.
messages: Cytoplasm

572477:ALVIN RS12395
gene id: 572477:ALVIN_RS12395
uniprot id: D3RNM9
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

572477:ALVIN RS08205
gene id: 572477:ALVIN_RS08205
uniprot id: D3RTS9
names: Similarity
messages: Belongs to the EcnA/EcnB lipoprotein family.

572477:ALVIN RS12435
gene id: 572477:ALVIN_RS12435
uniprot id: D3RNN7
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Binds 3 [4Fe-4S] clusters.
messages: Cell inner membrane
messages: Forms a heterotrimeric membrane-bound complex composed of a catalytic heterodimer (SoeAB) and a membrane anchor protein (SoeC).
messages: Part of the SoeABC complex that catalyzes the oxidation of sulfite to sulfate. SoeB is probably the electron transfer subunit.

572477:ALVIN RS11830
gene id: 572477:ALVIN_RS11830
uniprot id: D3RN03
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

572477:ALVIN RS04380
gene id: 572477:ALVIN_RS04380
uniprot id: D3RR02
names: Similarity
messages: Belongs to the methyl-accepting chemotaxis (MCP) protein family.

572477:ALVIN RS06715
gene id: 572477:ALVIN_RS06715
uniprot id: D3RSY8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a magnesium transporter.
messages: Belongs to the SLC41A transporter family.
messages: Cell membrane
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

572477:ALVIN RS00625
gene id: 572477:ALVIN_RS00625
uniprot id: D3RVG6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmI family.
messages: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
messages: Cytoplasm

572477:ALVIN RS13590
gene id: 572477:ALVIN_RS13590
uniprot id: D3RQ20
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
messages: Binds 1 FMN per subunit.
messages: Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.
messages: Cell membrane
messages: Monomer.

572477:ALVIN RS00990
gene id: 572477:ALVIN_RS00990
uniprot id: D3RVN7
names: Similarity
messages: Belongs to the prokaryotic GSH synthase family.

572477:ALVIN RS13815
gene id: 572477:ALVIN_RS13815
uniprot id: D3RQ64
names: Function
names: Similarity
messages: Belongs to the HypA/HybF family.
messages: Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.

572477:ALVIN RS07455
gene id: 572477:ALVIN_RS07455
uniprot id: D3RTD2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dsrC/tusE family.
messages: Cytoplasm
messages: Part of a sulfur-relay system.

572477:ALVIN RS09535
gene id: 572477:ALVIN_RS09535
uniprot id: D3RUI2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNase T family.
messages: Binds two Mg(2+) per subunit. The active form of the enzyme binds two Mg(2+) ions in its active site. The first Mg(2+) forms only one salt bridge with the protein.
messages: Homodimer.
messages: Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.

572477:ALVIN RS00530
gene id: 572477:ALVIN_RS00530
uniprot id: D3RVF2
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HesB/IscA family.
messages: Binds 1 iron-sulfur cluster per subunit.
messages: Homodimer.
messages: Required for insertion of 4Fe-4S clusters for at least IspG.

572477:ALVIN RS14840
gene id: 572477:ALVIN_RS14840
uniprot id: D3RRG4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiJ family.
messages: Cytoplasm
messages: Required for ubiquinone (coenzyme Q) biosynthesis. Binds hydrophobic ubiquinone biosynthetic intermediates via its SCP2 domain and is essential for the stability of the Ubi complex. May constitute a docking platform where Ubi enzymes assemble and access their SCP2-bound polyprenyl substrates.

572477:ALVIN RS04005
gene id: 572477:ALVIN_RS04005
uniprot id: D3RQE9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
messages: Cell membrane
messages: Heterodimer of a large and a small subunit.

572477:ALVIN RS11745
gene id: 572477:ALVIN_RS11745
uniprot id: D3RMY6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
messages: Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

572477:ALVIN RS13485
gene id: 572477:ALVIN_RS13485
uniprot id: D3RPZ9
names: Function
names: Similarity
messages: Belongs to the class-I DAHP synthase family.
messages: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP).

572477:ALVIN RS10240
gene id: 572477:ALVIN_RS10240
uniprot id: D3RV46
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the transferase hexapeptide repeat family. LpxA subfamily.
messages: Cytoplasm
messages: Homotrimer.
messages: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.

572477:ALVIN RS04795
gene id: 572477:ALVIN_RS04795
uniprot id: D3RR82
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC-2 integral membrane protein family.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS06295
gene id: 572477:ALVIN_RS06295
uniprot id: D3RSQ4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BamB family.
messages: Cell outer membrane
messages: Part of the Bam complex.
messages: Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.

572477:ALVIN RS13640
gene id: 572477:ALVIN_RS13640
uniprot id: D3RQ30
names: Similarity
messages: Belongs to the MQO family.

572477:ALVIN RS01715
gene id: 572477:ALVIN_RS01715
uniprot id: D3RN23
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dsrC/tusE family.
messages: Cytoplasm
messages: Part of a sulfur-relay system.

572477:ALVIN RS10870
gene id: 572477:ALVIN_RS10870
uniprot id: D3RVT9
names: Function
names: Similarity
messages: Belongs to the CcmH/CycL/Ccl2/NrfF family.
messages: Possible subunit of a heme lyase.

572477:ALVIN RS07860
gene id: 572477:ALVIN_RS07860
uniprot id: D3RTL2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
messages: Belongs to the FliW family.
messages: Cytoplasm
messages: Interacts with translational regulator CsrA and flagellin(s).

572477:ALVIN RS09730
gene id: 572477:ALVIN_RS09730
uniprot id: D3RUM2
names: Function
names: Similarity
messages: Belongs to the MsrA Met sulfoxide reductase family.
messages: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.

572477:ALVIN RS06020
gene id: 572477:ALVIN_RS06020
uniprot id: D3RSJ9
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NnrD/CARKD family.
messages: Belongs to the NnrE/AIBP family.
messages: Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.
messages: Binds 1 potassium ion per subunit.
messages: Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.
messages: Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
messages: Homotetramer.
messages: In the C-terminal section; belongs to the NnrD/CARKD family.
messages: In the N-terminal section; belongs to the NnrE/AIBP family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

572477:ALVIN RS11785
gene id: 572477:ALVIN_RS11785
uniprot id: D3RMZ4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

572477:ALVIN RS10540
gene id: 572477:ALVIN_RS10540
uniprot id: D3RVA4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
messages: Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
messages: Cytoplasm

572477:ALVIN RS15450
gene id: 572477:ALVIN_RS15450
uniprot id: D3RS62
names: Similarity
messages: Belongs to the polysaccharide synthase family.

572477:ALVIN RS07675
gene id: 572477:ALVIN_RS07675
uniprot id: D3RTH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.
messages: Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS11270
gene id: 572477:ALVIN_RS11270
uniprot id: D3RMP2
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Fur family.
messages: Cytoplasm
messages: Homodimer.

572477:ALVIN RS00195
gene id: 572477:ALVIN_RS00195
uniprot id: D3RUW2
names: Subcellular Location Annotation
messages: Membrane

572477:ALVIN RS06490
gene id: 572477:ALVIN_RS06490
uniprot id: D3RSU3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MobA family.
messages: Cytoplasm
messages: Monomer.
messages: The N-terminal domain determines nucleotide recognition and specific binding, while the C-terminal domain determines the specific binding to the target protein.
messages: Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.

572477:ALVIN RS00780
gene id: 572477:ALVIN_RS00780
uniprot id: D3RVJ7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RuvA family.
messages: Forms a complex with RuvB.
messages: The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.

572477:ALVIN RS09475
gene id: 572477:ALVIN_RS09475
uniprot id: O52057
names: Function
names: Similarity
names: Subunit
messages: Structural protein of the sulfur globules, which are intracellular globules that serve for sulfur storage in purple sulfur bacteria.
messages: The protein envelope of the sulfur globules is composed of the three different proteins CV1, CV2 and CV3.
messages: To C.vinosum CV2 and T.roseopersicina TR0.

572477:ALVIN RS12450
gene id: 572477:ALVIN_RS12450
uniprot id: D3RNP0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MetA family.
messages: Cytoplasm
messages: Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.

572477:ALVIN RS11220
gene id: 572477:ALVIN_RS11220
uniprot id: D3RW07
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB family.
messages: Cell inner membrane
messages: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins.

572477:ALVIN RS14905
gene id: 572477:ALVIN_RS14905
uniprot id: D3RRH7
names: Similarity
messages: Belongs to the LysR transcriptional regulatory family.

572477:ALVIN RS13670
gene id: 572477:ALVIN_RS13670
uniprot id: D3RQ35
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the dTDP-4-dehydrorhamnose reductase family.
messages: Binds 1 Mg(2+) ion per monomer.
messages: Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.

572477:ALVIN RS01575
gene id: 572477:ALVIN_RS01575
uniprot id: D3RML9
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoglycerate kinase family.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

572477:ALVIN RS11815
gene id: 572477:ALVIN_RS11815
uniprot id: D3RN00
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

572477:ALVIN RS10845
gene id: 572477:ALVIN_RS10845
uniprot id: D3RVT4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmC/CycZ/HelC family.
messages: Membrane
messages: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.

572477:ALVIN RS11945
gene id: 572477:ALVIN_RS11945
uniprot id: D3RNE3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP transporter large permease family.
messages: Cell inner membrane
messages: Membrane
messages: Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
messages: The complex comprises the extracytoplasmic solute receptor protein and the two transmembrane proteins.

572477:ALVIN RS04080
gene id: 572477:ALVIN_RS04080
uniprot id: Q46480
names: Domain
names: Similarity
messages: Belongs to the PurH family.
messages: The IMP cyclohydrolase activity resides in the N-terminal region.

572477:ALVIN RS04330
gene id: 572477:ALVIN_RS04330
uniprot id: D3RQZ2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TonB-dependent receptor family.
messages: Cell outer membrane

572477:ALVIN RS08065
gene id: 572477:ALVIN_RS08065
uniprot id: D3RTQ1
names: Similarity
messages: Belongs to the 6-phosphogluconate dehydrogenase family.

572477:ALVIN RS09750
gene id: 572477:ALVIN_RS09750
uniprot id: D3RUM6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
messages: Cell inner membrane
messages: Membrane

572477:ALVIN RS15830
gene id: 572477:ALVIN_RS15830
uniprot id: D3RW61
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

572477:ALVIN RS06255
gene id: 572477:ALVIN_RS06255
uniprot id: D3RSP6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RuvB family.
messages: Forms a complex with RuvA.
messages: The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.

572477:ALVIN RS11760
gene id: 572477:ALVIN_RS11760
uniprot id: D3RMY9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

572477:ALVIN RS13375
gene id: 572477:ALVIN_RS13375
uniprot id: D3RPX6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NqrDE/RnfAE family.
messages: Cell inner membrane
messages: Membrane
messages: Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
messages: The complex is composed of six subunits: RnfA, RnfB, RnfC, RnfD, RnfE and RnfG.

572477:ALVIN RS02730
gene id: 572477:ALVIN_RS02730
uniprot id: D3RNZ0
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.

572477:ALVIN RS11375
gene id: 572477:ALVIN_RS11375
uniprot id: D3RMR3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DksA family.
messages: Cytoplasm
messages: Interacts directly with the RNA polymerase.
messages: Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.

572477:ALVIN RS09905
gene id: 572477:ALVIN_RS09905
uniprot id: D3RUQ9
names: Function
names: Similarity
messages: Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
messages: O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.

572477:ALVIN RS03835
gene id: 572477:ALVIN_RS03835
uniprot id: D3RQB5
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.
messages: Binds directly to 16S ribosomal RNA.

572477:ALVIN RS11580
gene id: 572477:ALVIN_RS11580
uniprot id: D3RMV3
names: Similarity
messages: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily.

572477:ALVIN RS07935
gene id: 572477:ALVIN_RS07935
uniprot id: D3RTM5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TrpB family.
messages: Tetramer of two alpha and two beta chains.
messages: The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.

572477:ALVIN RS06645
gene id: 572477:ALVIN_RS06645
uniprot id: D3RSX4
names: Function
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.

572477:ALVIN RS00650
gene id: 572477:ALVIN_RS00650
uniprot id: D3RVH1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MurCDEF family. MurF subfamily.
messages: Cytoplasm
messages: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.

572477:ALVIN RS00640
gene id: 572477:ALVIN_RS00640
uniprot id: D3RVG9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsL family.
messages: Cell inner membrane
messages: Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
messages: Membrane
messages: Part of a complex composed of FtsB, FtsL and FtsQ.

572477:ALVIN RS14445
gene id: 572477:ALVIN_RS14445
uniprot id: D3RQW7
names: Function
names: Similarity
messages: Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
messages: Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.

572477:ALVIN RS11820
gene id: 572477:ALVIN_RS11820
uniprot id: D3RN01
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

572477:ALVIN RS04215
gene id: 572477:ALVIN_RS04215
uniprot id: D3RQJ2
names: Function
names: Similarity
messages: Belongs to the CobT family.
messages: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).

572477:ALVIN RS05595
gene id: 572477:ALVIN_RS05595
uniprot id: D3RSB1
names: Domain
names: Function
names: Similarity
messages: Belongs to the RecA family. RadA subfamily.
messages: DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
messages: Plays a role in repairing double-strand DNA breaks, probably involving stabilizing or processing branched DNA or blocked replication forks.
messages: The middle region has homology to RecA with ATPase motifs including the RadA KNRFG motif, while the C-terminus is homologous to Lon protease.

572477:ALVIN RS16080
gene id: 572477:ALVIN_RS16080
uniprot id: D3RWB4
names: Similarity
messages: Belongs to the UPF0225 family.

572477:ALVIN RS00200
gene id: 572477:ALVIN_RS00200
uniprot id: D3RUW3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase A chain family.
messages: Cell inner membrane
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
messages: Membrane

572477:ALVIN RS09330
gene id: 572477:ALVIN_RS09330
uniprot id: D3RUE1
names: Similarity
messages: Belongs to the NifX/NifY family.

572477:ALVIN RS08015
gene id: 572477:ALVIN_RS08015
uniprot id: D3RTP1
names: Cofactor
names: Similarity
messages: Belongs to the peptidase M42 family.
messages: Binds 2 divalent metal cations per subunit.

572477:ALVIN RS10215
gene id: 572477:ALVIN_RS10215
uniprot id: D3RV41
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50B family.
messages: Membrane

572477:ALVIN RS11850
gene id: 572477:ALVIN_RS11850
uniprot id: D3RMZ4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.