47872:GA0074696 RS21125
gene id: 47872:GA0074696_RS21125
uniprot id: A0A1C4ZBN9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRA-PH family.
messages: Cytoplasm

47872:GA0074696 RS06530
gene id: 47872:GA0074696_RS06530
uniprot id: A0A1C4VR45
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

47872:GA0074696 RS06460
gene id: 47872:GA0074696_RS06460
uniprot id: A0A1C4VQI6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

47872:GA0074696 RS06515
gene id: 47872:GA0074696_RS06515
uniprot id: A0A1C4VR00
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

47872:GA0074696 RS24085
gene id: 47872:GA0074696_RS24085
uniprot id: A0A1C4ZTI4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SsgA family.
messages: Cell septum

47872:GA0074696 RS06610
gene id: 47872:GA0074696_RS06610
uniprot id: A0A1C4VRS9
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

47872:GA0074696 RS06785
gene id: 47872:GA0074696_RS06785
uniprot id: A0A1C4VTE7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL13 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

47872:GA0074696 RS24000
gene id: 47872:GA0074696_RS24000
uniprot id: A0A1C4ZTP5
names: Subcellular Location Annotation
messages: Cytoplasm

47872:GA0074696 RS06600
gene id: 47872:GA0074696_RS06600
uniprot id: A0A1C4VRR5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

47872:GA0074696 RS06585
gene id: 47872:GA0074696_RS06585
uniprot id: A0A1C4VS13
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

47872:GA0074696 RS06590
gene id: 47872:GA0074696_RS06590
uniprot id: A0A1C4VRN5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

47872:GA0074696 RS21100
gene id: 47872:GA0074696_RS21100
uniprot id: A0A1C4ZBQ7
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

47872:GA0074696 RS06475
gene id: 47872:GA0074696_RS06475
uniprot id: A0A1C4VQM6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

47872:GA0074696 RS03150
gene id: 47872:GA0074696_RS03150
uniprot id: A0A1C4UUI5
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

47872:GA0074696 RS17770
gene id: 47872:GA0074696_RS17770
uniprot id: A0A1C4YPI1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sbp family.
messages: Cell membrane

47872:GA0074696 RS06485
gene id: 47872:GA0074696_RS06485
uniprot id: A0A1C4VQM9
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

47872:GA0074696 RS06790
gene id: 47872:GA0074696_RS06790
uniprot id: A0A1C4VTI3
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

47872:GA0074696 RS06360
gene id: 47872:GA0074696_RS06360
uniprot id: A0A1C4VPJ4
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

47872:GA0074696 RS25915
gene id: 47872:GA0074696_RS25915
uniprot id: A0A1C5A285
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

47872:GA0074696 RS03160
gene id: 47872:GA0074696_RS03160
uniprot id: A0A1C4UUL1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

47872:GA0074696 RS18765
gene id: 47872:GA0074696_RS18765
uniprot id: A0A1C4YWA1
names: Domain
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the prokaryotic ubiquitin-like protein family.
messages: Is modified by deamidation of its C-terminal glutamine to glutamate by the deamidase Dop, a prerequisite to the subsequent pupylation process.
messages: Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation.
messages: Strongly interacts with the proteasome-associated ATPase ARC through a hydrophobic interface; the interacting region of Pup lies in its C-terminal half. There is one Pup binding site per ARC hexamer ring.
messages: The N-terminal unstructured half of Pup provides a signal required to initiate unfolding and degradation by the proteasome but is not needed for pupylation, while the C-terminal helical half of Pup interacts with ARC to target proteins to the proteasome.

47872:GA0074696 RS06500
gene id: 47872:GA0074696_RS06500
uniprot id: A0A1C4VR91
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

47872:GA0074696 RS07595
gene id: 47872:GA0074696_RS07595
uniprot id: A0A1C4W0B0
names: Subcellular Location Annotation
messages: Cytoplasm

47872:GA0074696 RS12350
gene id: 47872:GA0074696_RS12350
uniprot id: A0A1C4XBV5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SecG family.
messages: Cell membrane
messages: Involved in protein export. Participates in an early event of protein translocation.
messages: Membrane

47872:GA0074696 RS21225
gene id: 47872:GA0074696_RS21225
uniprot id: A0A1C4ZCE2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

47872:GA0074696 RS06440
gene id: 47872:GA0074696_RS06440
uniprot id: A0A1C4VQB0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

47872:GA0074696 RS28155
gene id: 47872:GA0074696_RS28155
uniprot id: A0A1C5ABG1
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional regulator. Probably redox-responsive. The apo- but not holo-form probably binds DNA.
messages: Belongs to the WhiB family.
messages: Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.
messages: Cytoplasm
messages: The Fe-S cluster can be nitrosylated by nitric oxide (NO).
messages: Upon Fe-S cluster removal intramolecular disulfide bonds are formed.

47872:GA0074696 RS21095
gene id: 47872:GA0074696_RS21095
uniprot id: A0A1C4ZBZ1
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

47872:GA0074696 RS06535
gene id: 47872:GA0074696_RS06535
uniprot id: A0A1C4VRI9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.