4538:GN06 pgp108
gene id: 4538:GN06_pgp108
uniprot id: I1QWQ5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: Binds to 23S rRNA.
messages: Part of the 50S ribosomal subunit.

4538:GN06 pgp071
gene id: 4538:GN06_pgp071
uniprot id: I1QWQ5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: Binds to 23S rRNA.
messages: Part of the 50S ribosomal subunit.

4538:GN06 pgp103
gene id: 4538:GN06_pgp103
uniprot id: I1Q659
names: Similarity
messages: Belongs to the universal ribosomal protein uS7 family.

4538:GN06 pgp024
gene id: 4538:GN06_pgp024
uniprot id: I1R2E3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsaA/PsaB family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.
messages: The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits.

4538:GN06 pgp028
gene id: 4538:GN06_pgp028
uniprot id: I1Q5K8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 30 kDa subunit family.
messages: Cell membrane
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 p2
gene id: 4538:GN06_p2
uniprot id: A0A059UF53
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bL32 family.
messages: chloroplast

4538:GN06 pgp013
gene id: 4538:GN06_pgp013
uniprot id: A0A059U6J9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbM family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

4538:GN06 pgp015
gene id: 4538:GN06_pgp015
uniprot id: I1R2F1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

4538:GN06 pgp021
gene id: 4538:GN06_pgp021
uniprot id: I1QKU1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase B chain family.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Membrane

4538:GN06 pgp112
gene id: 4538:GN06_pgp112
uniprot id: A0A059UFQ6
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.

4538:GN06 pgp032
gene id: 4538:GN06_pgp032
uniprot id: A0A059UBX0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

4538:GN06 pgp046
gene id: 4538:GN06_pgp046
uniprot id: A0A059UBX8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetL family.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

4538:GN06 pgp044
gene id: 4538:GN06_pgp044
uniprot id: A0A059UFM7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbE/PsbF family.
messages: Cellular thylakoid membrane
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Membrane
messages: This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: With its partner (PsbE) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: chloroplast thylakoid membrane

4538:GN06 pgp087
gene id: 4538:GN06_pgp087
uniprot id: I1Q6E8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
messages: Cellular thylakoid membrane
messages: May interact with Ccs1.
messages: Membrane
messages: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.

4538:GN06 pgp003
gene id: 4538:GN06_pgp003
uniprot id: A0A059UEZ8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the intron maturase 2 family. MatK subfamily.
messages: Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns.
messages: chloroplast

4538:GN06 pgp051
gene id: 4538:GN06_pgp051
uniprot id: I1Q5I6
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

4538:GN06 pgp059
gene id: 4538:GN06_pgp059
uniprot id: A0A059UFN7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.
messages: chloroplast

4538:GN06 pgp066
gene id: 4538:GN06_pgp066
uniprot id: I1QWE9
names: Similarity
messages: Belongs to the universal ribosomal protein uS3 family.

4538:GN06 pgp064
gene id: 4538:GN06_pgp064
uniprot id: I1Q6C6
names: Similarity
messages: Belongs to the universal ribosomal protein uL14 family.

4538:GN06 pgp030
gene id: 4538:GN06_pgp030
uniprot id: I1QKU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Mitochondrion membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp095
gene id: 4538:GN06_pgp095
uniprot id: I1R2H1
names: Similarity
messages: Belongs to the universal ribosomal protein uS15 family.

4538:GN06 pgp052
gene id: 4538:GN06_pgp052
uniprot id: I1Q6D3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.
messages: Component of the chloroplastic Clp protease core complex.
messages: Cytoplasm

4538:GN06 pgp016
gene id: 4538:GN06_pgp016
uniprot id: I1QWH8
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 Zn(2+) ion per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

4538:GN06 pgp067
gene id: 4538:GN06_pgp067
uniprot id: D2SYG2
names: Similarity
messages: Belongs to the universal ribosomal protein uL22 family.

4538:GN06 pgp089
gene id: 4538:GN06_pgp089
uniprot id: I1Q6F0
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn.
messages: Binds 2 [4Fe-4S] clusters. Cluster 2 is most probably the spectroscopically characterized electron acceptor FA and cluster 1 is most probably FB.
messages: Cellular thylakoid membrane
messages: The cyanobacterial PSI reaction center is composed of one copy each of PsaA,B,C,D,E,F,I,J,K,L,M and X, and forms trimeric complexes.

4538:GN06 pgp027
gene id: 4538:GN06_pgp027
uniprot id: I1Q1X7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.
messages: chloroplast

4538:GN06 pgp094
gene id: 4538:GN06_pgp094
uniprot id: I1Q6F5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp054
gene id: 4538:GN06_pgp054
uniprot id: A0A059UFN5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbT family.
messages: Cellular thylakoid membrane
messages: Seems to play a role in the dimerization of PSII.
messages: chloroplast thylakoid membrane

4538:GN06 pgp076
gene id: 4538:GN06_pgp076
uniprot id: I1Q659
names: Similarity
messages: Belongs to the universal ribosomal protein uS7 family.

4538:GN06 pgp042
gene id: 4538:GN06_pgp042
uniprot id: A0A059U6L7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbJ family.
messages: Cellular thylakoid membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

4538:GN06 pgp053
gene id: 4538:GN06_pgp053
uniprot id: I1QWF7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbB/PsbC family. PsbB subfamily.
messages: Binds multiple chlorophylls. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

4538:GN06 pgp050
gene id: 4538:GN06_pgp050
uniprot id: I1Q6D5
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Part of the 30S ribosomal subunit.

4538:GN06 pgp055
gene id: 4538:GN06_pgp055
uniprot id: A0A059UF33
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbN family.
messages: Cellular thylakoid membrane
messages: May play a role in photosystem I and II biogenesis.
messages: Membrane
messages: Originally thought to be a component of PSII; based on experiments in Synechocystis, N.tabacum and barley, and its absence from PSII in T.elongatus and T.vulcanus, this is probably not true.

4538:GN06 pgp093
gene id: 4538:GN06_pgp093
uniprot id: I1QWL7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.

4538:GN06 pgp019
gene id: 4538:GN06_pgp019
uniprot id: I1QWH6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase A chain family.
messages: Membrane

4538:GN06 pgp043
gene id: 4538:GN06_pgp043
uniprot id: A0A059UAN3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbL family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

4538:GN06 pgp062
gene id: 4538:GN06_pgp062
uniprot id: A0A059U6M9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

4538:GN06 pgp102
gene id: 4538:GN06_pgp102
uniprot id: A0A059UF67
names: Similarity
messages: Belongs to the universal ribosomal protein uS12 family.

4538:GN06 pgp014
gene id: 4538:GN06_pgp014
uniprot id: A0A059UAL1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetN family.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

4538:GN06 pgp083
gene id: 4538:GN06_pgp083
uniprot id: I1R2H1
names: Similarity
messages: Belongs to the universal ribosomal protein uS15 family.

4538:GN06 pgp041
gene id: 4538:GN06_pgp041
uniprot id: I1PHZ3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome f family.
messages: Binds 1 heme group covalently.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

4538:GN06 pgp047
gene id: 4538:GN06_pgp047
uniprot id: A0A059U6L9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetG family.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

4538:GN06 pgp049
gene id: 4538:GN06_pgp049
uniprot id: I1R2C9
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

4538:GN06 pgp001
gene id: 4538:GN06_pgp001
uniprot id: A0A059UF67
names: Similarity
messages: Belongs to the universal ribosomal protein uS12 family.

4538:GN06 pgp029
gene id: 4538:GN06_pgp029
uniprot id: I1Q5K7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 20 kDa subunit family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp091
gene id: 4538:GN06_pgp091
uniprot id: I1PHU7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 6 family.
messages: Membrane

4538:GN06 pgp056
gene id: 4538:GN06_pgp056
uniprot id: A0A059UBY5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbH family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, numerous small proteins, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

4538:GN06 pgp008
gene id: 4538:GN06_pgp008
uniprot id: A0A059UFK7
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.
messages: The D1/D2 heterodimer binds P680, chlorophylls that are the primary electron donor of PSII, and subsequent electron acceptors. It shares a non-heme iron and each subunit binds pheophytin, quinone, additional chlorophylls, carotenoids and lipids. There is also a Cl(-1) ion associated with D1 and D2, which is required for oxygen evolution. The PSII complex binds additional chlorophylls, carotenoids and specific lipids.

4538:GN06 pgp069
gene id: 4538:GN06_pgp069
uniprot id: A0A059UAS2
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

4538:GN06 pgp085
gene id: 4538:GN06_pgp085
uniprot id: I1Q6E7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 5 family.
messages: Membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

4538:GN06 pgp006
gene id: 4538:GN06_pgp006
uniprot id: A0A059UAK7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbI family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

4538:GN06 pgp045
gene id: 4538:GN06_pgp045
uniprot id: I1QKV4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbE/PsbF family.
messages: Cellular thylakoid membrane
messages: Heterodimer of an alpha subunit and a beta subunit. PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Membrane
messages: This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
messages: With its partner (PsbF) binds heme. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: chloroplast thylakoid membrane

4538:GN06 pgp104
gene id: 4538:GN06_pgp104
uniprot id: I1Q4K3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp065
gene id: 4538:GN06_pgp065
uniprot id: A0A059UF44
names: Similarity
messages: Belongs to the universal ribosomal protein uL16 family.

4538:GN06 pgp090
gene id: 4538:GN06_pgp090
uniprot id: I1QWL4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp031
gene id: 4538:GN06_pgp031
uniprot id: A0A059UF16
names: Similarity
messages: Belongs to the ATPase epsilon chain family.

4538:GN06 p1
gene id: 4538:GN06_p1
uniprot id: A0A059UFQ6
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.

4538:GN06 pgp010
gene id: 4538:GN06_pgp010
uniprot id: D2E545
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbZ family.
messages: Cellular thylakoid membrane
messages: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.

4538:GN06 pgp004
gene id: 4538:GN06_pgp004
uniprot id: A0A059UBV2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bacterial ribosomal protein bS16 family.
messages: chloroplast

4538:GN06 pgp075
gene id: 4538:GN06_pgp075
uniprot id: I1Q4K3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 2 family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp025
gene id: 4538:GN06_pgp025
uniprot id: I1Q6B3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsaA/PsaB family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin.
messages: The PsaA/B heterodimer binds the P700 chlorophyll special pair and subsequent electron acceptors. PSI consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The eukaryotic PSI reaction center is composed of at least 11 subunits.

4538:GN06 pgp009
gene id: 4538:GN06_pgp009
uniprot id: I1PHW8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbB/PsbC family. PsbC subfamily.
messages: Binds multiple chlorophylls and provides some of the ligands for the Ca-4Mn-5O cluster of the oxygen-evolving complex. It may also provide a ligand for a Cl- that is required for oxygen evolution. PSII binds additional chlorophylls, carotenoids and specific lipids.
messages: Cellular thylakoid membrane
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

4538:GN06 pgp048
gene id: 4538:GN06_pgp048
uniprot id: D2SYQ9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaJ family.
messages: Cellular thylakoid membrane
messages: May help in the organization of the PsaE and PsaF subunits.
messages: Membrane

4538:GN06 pgp023
gene id: 4538:GN06_pgp023
uniprot id: I1Q644
names: Similarity
messages: Belongs to the universal ribosomal protein uS14 family.

4538:GN06 pgp022
gene id: 4538:GN06_pgp022
uniprot id: I1Q643
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

4538:GN06 pgp002
gene id: 4538:GN06_pgp002
uniprot id: I1PHW4
names: Cofactor
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.
messages: Belongs to the reaction center PufL/M/PsbA/D family.
messages: C-terminally processed by CtpA; processing is essential to allow assembly of the oxygen-evolving complex and thus photosynthetic growth.
messages: Cellular thylakoid membrane
messages: Herbicides such as atrazine, BNT, diuron or ioxynil bind in the Q(B) binding site and block subsequent electron transfer.
messages: Membrane
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
messages: The D1/D2 heterodimer binds P680, chlorophylls that are the primary electron donor of PSII, and subsequent electron acceptors. It shares a non-heme iron and each subunit binds pheophytin, quinone, additional chlorophylls, carotenoids and lipids. D1 provides most of the ligands for the Mn4-Ca-O5 cluster of the oxygen-evolving complex (OEC). There is also a Cl(-1) ion associated with D1 and D2, which is required for oxygen evolution. The PSII complex binds additional chlorophylls, carotenoids and specific lipids.
messages: Tyr-161 forms a radical intermediate that is referred to as redox-active TyrZ, YZ or Y-Z.

4538:GN06 pgp063
gene id: 4538:GN06_pgp063
uniprot id: I1Q5Q7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit.

4538:GN06 pgp088
gene id: 4538:GN06_pgp088
uniprot id: I1Q6E9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 4 family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: NDH-1 shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp026
gene id: 4538:GN06_pgp026
uniprot id: A0A059UF13
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf3 family.
messages: Cellular thylakoid membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Seems to be required for the assembly of the photosystem I complex.

4538:GN06 pgp037
gene id: 4538:GN06_pgp037
uniprot id: A0A059UAM8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaI family.
messages: Cellular thylakoid membrane
messages: May help in the organization of the PsaL subunit.
messages: Membrane
messages: chloroplast thylakoid membrane

4538:GN06 pgp038
gene id: 4538:GN06_pgp038
uniprot id: I1Q1W9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf4 family.
messages: Cellular thylakoid membrane
messages: Membrane
messages: Seems to be required for the assembly of the photosystem I complex.

4538:GN06 pgp061
gene id: 4538:GN06_pgp061
uniprot id: A0A059UBY9
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

4538:GN06 pgp040
gene id: 4538:GN06_pgp040
uniprot id: I1PHZ2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cema family.
messages: Membrane

4538:GN06 pgp109
gene id: 4538:GN06_pgp109
uniprot id: A0A059UAS2
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

4538:GN06 pgp020
gene id: 4538:GN06_pgp020
uniprot id: I1Q651
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

4538:GN06 pgp092
gene id: 4538:GN06_pgp092
uniprot id: I1QKY4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 23 kDa subunit family.
messages: Binds 2 [4Fe-4S] clusters per subunit.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

4538:GN06 pgp060
gene id: 4538:GN06_pgp060
uniprot id: A0A059UF39
names: Similarity
messages: Belongs to the universal ribosomal protein uS11 family.

4538:GN06 pgp033
gene id: 4538:GN06_pgp033
uniprot id: A0A059U6L3
names: Cofactor
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuBisCO large chain family. Type I subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterohexadecamer of 8 large chains and 8 small chains; disulfide-linked. The disulfide link is formed within the large subunit homodimers.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: The disulfide bond which can form in the large chain dimeric partners within the hexadecamer appears to be associated with oxidative stress and protein turnover.
messages: chloroplast

4538:GN06 pgp018
gene id: 4538:GN06_pgp018
uniprot id: I1QKT9
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

4538:GN06 pgp058
gene id: 4538:GN06_pgp058
uniprot id: A0A059UAP5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family. PetD subfamily.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

4538:GN06 pgp057
gene id: 4538:GN06_pgp057
uniprot id: A0A059U6M6
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b family. PetB subfamily.
messages: Binds 2 heme groups. One heme group is bound covalently by a single cysteine link, the other one non-covalently.
messages: Cellular thylakoid membrane
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Heme 1 (or BH or b566) is high-potential and absorbs at about 566 nm, and heme 2 (or BL or b562) is low-potential and absorbs at about 562 nm.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

4538:GN06 pgp005
gene id: 4538:GN06_pgp005
uniprot id: A0A059U6J5
names: Subcellular Location Annotation
messages: Membrane