3702:AT2G26250
gene id: 3702:AT2G26250
uniprot id: A0A178VYA3
uniprot id: Q570B4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Called 'FIDDLEHEAD' because of the shape of mutants, in which adhering floral buds cause curling of inflorescence, resulting in structures reminiscent of fern fiddlehead.
messages: Contributes to cuticular wax and suberin biosynthesis. Prevents the postgenital fusion of epiderm cells in organs in contact, as well as ectopic pollen hydration and germination. Required during ovules formation. May regulate an epidermis-specific developmental program during gynoecial ontogeny.
messages: Endoplasmic reticulum membrane
messages: Expressed in prefusion carpel abaxial and adaxial epidermis. Accumulates in ovule primordia, but restricted to chalaza in mature ovules. Also present in cells of stigmatic papillae, at the margins of ovules, and around the embryo sac.
messages: In additions to several malformations due to organ fusion, plants lacking FDH demonstrate an enhanced cell wall permeability, reduced trichome formation, and are female sterile.
messages: Mostly expressed in epidermal cells of floral and vegetative meristems and, to a lower extent, of leaves and coleoptiles, especially in young tissues. Also present in trichomes and phloem (PubMed:10559443, PubMed:10655527). Expressed in siliques, seedlings, flowers and leaves (PubMed:18465198).
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Down-regulated by darkness and low temperature, and up-regulated by salt and osmotic stress (PubMed:18465198).

3702:AT3G06770
gene id: 3702:AT3G06770
uniprot id: A0A178VEB5
uniprot id: A0A1I9LN94
uniprot id: A0A384L8B6
uniprot id: A0A384LCL6
uniprot id: Q8RWK6
uniprot id: Q9M7Y3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G08230
gene id: 3702:AT5G08230
uniprot id: Q9LEY4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed throughout young primordia, and vegetative and reproductive apices.
messages: No visible phenotype under normal growth conditions, but the triple mutant plants hulk1, hulk2 and hulk3 show delayed flowering.
messages: Nucleus
messages: Probable transcription factor that acts with partial redundancy with HULK2 and HULK3. Plays diverse and essential roles in the control of plant development, physiology and flowering time.

3702:AT5G16050
gene id: 3702:AT5G16050
uniprot id: A0A178UKR5
uniprot id: P42645
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: Cytoplasm
messages: Interacts with EDE1 (PubMed:21558460). Interacts with DREB1A and DREB1B in the nucleus (PubMed:28344081). Interacts with CINV1 (PubMed:25256212).
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes. May be involved in cell cycle regulation by binding to soluble EDE1 and sequestering it in an inactive form during the early stages of mitosis.
messages: Nucleus

3702:AT2G15610
gene id: 3702:AT2G15610
uniprot id: A0A178VQW4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G45890
gene id: 3702:AT3G45890
uniprot id: A0A654FEH6
uniprot id: Q7X6P3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RUS1 family.
messages: Expressed in cotyledons, roots, hypocotyls, leaf veins, root vascular tissues and root tips. Expressed near the root apical meristem, in the cortex region of the root elongation zone, in lateral roots and emerging lateral roots. Not detected in extreme root apical meristem or root cap.
messages: Interacts (via the DUF647 domain) with RUS2 (via the DUF647 domain).
messages: Involved in a root UV-B sensing pathway and in the protection against the hypersensitivity to very low-fluence-rate (VLF) UV-B. RSU1 and RUS2 are probably both negative modulators of the same UV-B perception pathway, which when overstimulated in the roots causes a block to postgermination development. Required for polar auxin transport by maintaining the proper levels of auxin transporters AUX1 (AC Q96247) and PIN proteins on the plasma membrane.
messages: No visible phenotype under normal growth conditions. Extremely stunted growth, failure to develop true postembryonic leaves and arrested primary root elongation, when grown in vitro.
messages: Several mutations in ASP2 (AC P46645), but not all, and any of the non-phosphorylated B6 vitamers can suppress the rus phenotype.
messages: chloroplast membrane

3702:AT5G59720
gene id: 3702:AT5G59720
uniprot id: A0A178UES7
uniprot id: P19037
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates after heat shock.
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Cytoplasm
messages: May form oligomeric structures. Binds to AKR2A (PubMed:21730198).

3702:AT5G55131
gene id: 3702:AT5G55131
uniprot id: Q2V2Y3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G65320
gene id: 3702:AT1G65320
uniprot id: Q8GZA4
names: Subcellular Location Annotation
messages: Vacuole membrane

3702:AT2G36770
gene id: 3702:AT2G36770
uniprot id: A0A5S9X538
uniprot id: Q9ZQ97
uniprot id: W8QNU5
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT3G19670
gene id: 3702:AT3G19670
uniprot id: F4JCC1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PRPF40 family.
messages: Binds the phosphorylated C-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries (PubMed:10907853). May be involved in pre-mRNA splicing (Probable).
messages: Expressed in roots, shoots, rosette leaves, cauline leaves, stems and flowers.
messages: Interacts (via the WW domains) with the phosphorylated C-terminal domain of NRPB1 (via CTD domain).
messages: No visible phenotype under normal growth conditions, probably due to the redundancy with PPRP40A and PPRP40C.
messages: Nucleus

3702:AT5G52730
gene id: 3702:AT5G52730
uniprot id: Q9LTE4
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Contains an apparent HMA-like domain but lacks the core conserved Cys-X-X-Cys motif.
messages: Probable heavy-metal-binding protein.

3702:AT4G04760
gene id: 3702:AT4G04760
uniprot id: A0A1P8B3U9
uniprot id: A0A1P8B3V9
uniprot id: Q9M0Z9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT5G09590
gene id: 3702:AT5G09590
uniprot id: Q9LDZ0
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: By heat shock.
messages: Chaperone involved in the maturation of iron-sulfur [Fe-S] cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HSCB and ISU1 (By similarity). In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable).
messages: Mitochondrion
messages: Up-regulated during seed maturation.

3702:AT1G28060
gene id: 3702:AT1G28060
uniprot id: Q9C7E7
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Embryonic lethality when homozygous.
messages: Functions in the RNA-directed DNA methylation (RdDM) pathway. Acts as a pre-mRNA splicing factor, likely by affecting Pol V transcripts. Affects DNA methylation of transposable elements (TEs) and preferentially influences NRPD1- and ROS1-targeted loci.
messages: nucleoplasm

3702:AT3G20330
gene id: 3702:AT3G20330
uniprot id: A0A654FHJ6
uniprot id: P49077
names: Activity Regulation
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically regulated by UMP.
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
messages: Homotrimer.
messages: chloroplast

3702:AT1G69010
gene id: 3702:AT1G69010
uniprot id: Q9CAA4
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer (Probable). Interacts with the N-terminus of BZR2/BES1.
messages: Nucleus
messages: Positive brassinosteroid-signaling protein.
messages: Repressed by heat treatment.

3702:AT3G45130
gene id: 3702:AT3G45130
uniprot id: A0A1I9LTE4
uniprot id: A0A5S9XJK9
uniprot id: Q1G1A4
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the terpene cyclase/mutase family.
messages: Converts oxidosqualene to lanosterol.
messages: Expressed in roots, stems and siliques. Low expression in rosette leaves.
messages: No visible phenotype.

3702:AT5G57590
gene id: 3702:AT5G57590
uniprot id: B0F481
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Arrested embryos at the transition to cotyledon stages of development (PubMed:11779812, PubMed:17993549). Biotin depletion leading to lethality; this phenotype is rescued by exogenous supply of biotin (PubMed:12644697, PubMed:23031218).
messages: Bifunctional enzyme that catalyzes two different reactions involved in the biotin biosynthesis.
messages: Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring.
messages: Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only aminotransferase known to utilize SAM as an amino donor.
messages: Homodimer.
messages: In the C-terminal section; belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
messages: In the N-terminal section; belongs to the dethiobiotin synthetase family.
messages: May be due to a competing acceptor splice site.
messages: May be due to an intron retention.
messages: Mitochondrion matrix

3702:AT1G49540
gene id: 3702:AT1G49540
uniprot id: F4I1S7
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat ELP2 family.
messages: Component of the elongator complex which consists of ELP1/ELO2, ELP2, ELP3/ELO3, ELP4/ELO1, ELP5, and ELP6.
messages: Component of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine) (By similarity). The elongator complex catalyzes formation of carboxymethyluridine in the wobble base at position 34 in tRNAs (By similarity). Promotes organ development by modulating cell division rate. Prevents abscisic acid (ABA) signaling leading to stomatal closure and seedling growth inhibition. Involved in oxidative stress signaling. Prevents anthocyanin accumulation. Accelerator of defense gene induction required for rapid defense gene induction, and for the establishment of both basal and effector-triggered immunity (ETI), in a NPR1-independent manner, but is not required for systemic acquired resistance (SAR) establishment (PubMed:19500300, PubMed:20807211).
messages: Cytoplasm
messages: Expressed in leaves, stems, roots, flowers, siliques and guard cells.
messages: Folds into a two seven-bladed beta-propeller structure which is required for elongator complex assembly.
messages: Narrow leaves and reduced root growth that results from a decreased cell division rate. Increased abscisic acid (ABA) sensitivity and drought tolerance. Higher resistance to oxidative stress mediated by methyl viologen (MV) that blocks electron transport during photosynthesis and by CsCl in light. Accumulates anthocyanins. Reduced defense gene induction kinetics and salicylic acid (SA) accumulation mediated by pathogens (e.g. Pseudomonas syringae pv. maculicola) accompanied by an enhanced susceptibility in npr1 deficient plants.
messages: No experimental confirmation available.
messages: Nucleus
messages: The elongator complex was originally thought to play a role in transcription elongation. However, it is no longer thought to play a direct role in this process and its primary function is thought to be in tRNA modification.

3702:AT3G45140
gene id: 3702:AT3G45140
uniprot id: A0A1I9LPH1
uniprot id: P38418
names: Caution
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 13S-lipoxygenase that can use linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Required for the wound-induced synthesis of jasmonic acid (JA) in leaves.
messages: Belongs to the lipoxygenase family.
messages: Binds 1 Fe cation per subunit. Iron is tightly bound.
messages: By methyl jasmonate (MeJA) and wounding, probably through nitric oxide-mediated (NO) induction. Slightly locally induced upon herbivors infestation such as aphids (Myzus persicae and Brevicoryne brassicae), or caterpillar (Spodoptera exigua). Induced by leaf-volatiles generated by herbivors-mediated wounding such as (E)-2-hexenal, (Z)-3-hexenal, (Z)-3-hexenol or allo-ocimene (2,6-dimethyl-2,4,6-octatriene). Increased levels by bacterial pathogens (e.g. P.viridiflava and P.syringae pv. tomato). Repressed by WRKY62.
messages: Cytoplasm
messages: Expression is sharply reduced in leaves during leaf senescence.
messages: In leaves and inflorescences but not abundant in seeds, roots and stems.
messages: Interacts with EIF4E2.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
messages: chloroplast

3702:AT4G27960
gene id: 3702:AT4G27960
uniprot id: A0A178UV17
uniprot id: F4JKF3
uniprot id: P35132
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin-like protein SUMO/SMT3 from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Highest expression in young stems and old leaves. Lowest levels in floral buds, anthers and young leaves.
messages: Interacts with CHIP.
messages: Not induced by heat shock or wounding.
messages: Up-regulated during senescence, but not during the G0 to S phase transition.

3702:AT1G20350
gene id: 3702:AT1G20350
uniprot id: Q9LN27
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family.
messages: Component of the TIM17:23 complex at least composed of TIM23, TIM17 and TIM50. The complex interacts with the TIM44 component of the PAM complex (By similarity).
messages: Essential component of the TIM17:23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. Links the inner and outer membranes (By similarity).
messages: Expressed in flowers, leaves and cotyledons, and at very low levels in roots.
messages: Mitochondrion inner membrane
messages: Up-regulated after antimycin A or rotenone treatments.

3702:AT1G17400
gene id: 3702:AT1G17400
uniprot id: A0A1P8ARW5
uniprot id: A0A384KI90
uniprot id: Q58G53
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the LAZY family.
messages: Expressed in the endodermis of inflorescence stems and hypocotyls (PubMed:28765510). Highly expressed in hypocotyls and root tips of young seedlings (PubMed:28821594).
messages: Involved in the regulation of root gravitropism (PubMed:27748769). Functions redundantly with LAZY3 and LAZY4 in the control of root gravitropism (PubMed:27748769). Functions redundantly with LAZY1, LAZY3 and LAZY4 to control plant architecture by coupling gravity sensing to the formation of auxin gradients (PubMed:28821594). Involved redundantly with LAZY1 and LAZY4 in the regulation of both shoot and root gravitropism (PubMed:28765510). Mediates gravity signaling in statocytes downstream of amyloplast displacement, leading to the generation of asymmetric auxin distribution in gravity-responding organs (PubMed:28765510). Regulates the direction of polar auxin transport in response to gravity through the control of asymmetric PIN3 expression in the root cap columella (PubMed:28765510). Regulation of auxin flow by the three proteins LAZY1, LAZY2 and LAZY4 in statocytes influences plant architecture by controlling the growth angle of lateral shoots and lateral roots (PubMed:28765510).
messages: No visible phenotype under normal growth conditions (PubMed:27748769). Roots of plants lacking LAZY2, LAZY3 and LAZY4 exhibit a negative gravitropic response, and grow upward in the opposite direrction of root gravitropism (PubMed:27748769).

3702:AT2G19570
gene id: 3702:AT2G19570
uniprot id: A0A178VLA3
uniprot id: O65896
names: Activity Regulation
names: Cofactor
names: Function
names: Sequence Caution
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, rosette leaves, stems and flowers.
messages: Homodimer.
messages: Inhibited by uridine, CMP and dCMP.
messages: Sequencing errors.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. Functions as a conventional cytidine deaminase. Has no affinity for RNA and is not involved in RNA-editing by C-to-U deamination.

3702:AT3G02570
gene id: 3702:AT3G02570
uniprot id: A0A178VN24
uniprot id: Q9M884
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the mannose-6-phosphate isomerase type 1 family.
messages: Binds 1 zinc ion per subunit.
messages: By light (at the protein level). Down-regulated by dark (at the protein level). Down-regulated by DCMU, an exogenous photosynthesis inhibitor.
messages: Constitutively expressed in both vegetative and reproductive organs under normal growth conditions (at protein level).
messages: Endosperm development arrested.
messages: Inhibited by EDTA, Zn(2+), Cd(2+), Co(2+), p-chloromercuribenzoate and L-ascorbic acid (AsA).
messages: Phosphomannose isomerase involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions. Involved in the ascorbic acid (AsA) biosynthesis. Required during the endosperm development.

3702:AT3G03847
gene id: 3702:AT3G03847
uniprot id: A0A654F3V9
uniprot id: Q3EBC5
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT4G22505
gene id: 3702:AT4G22505
uniprot id: F4JLV7
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT5G12190
gene id: 3702:AT5G12190
uniprot id: A0A178UGK3
uniprot id: Q9FMP4
names: Function
names: Subcellular Location Annotation
messages: May be necessary for the splicing of pre-mRNA.
messages: Nucleus

3702:AT2G38240
gene id: 3702:AT2G38240
uniprot id: A0A654FAH7
uniprot id: O80449
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: 2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway (PubMed:28760569, PubMed:28559313). Converts JA to 12-hydroxyjasmonate (12OH-JA), an inactive form of JA (PubMed:28760569, PubMed:28559313). Is specific to free JA, and cannot oxidize the bioactive form jasmonoyl-L-isoleucine (JA-Ile) or other JA-amino acid conjugates (PubMed:28760569). Prevents over-accumulation of JA and indirectly its bioactive form JA-Ile under stress response (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense signaling, by contributing to 12OH-JA accumulation, which represses JA defense responses upon infection by the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense responses upon infestation by the herbivorous caterpillar Mamestra brassicae (PubMed:28559313).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Induced by infection with the bacterial pathogen Pseudomonas syringae pv. tomato (PubMed:16553894). Induced by wounding (PubMed:17675405, PubMed:28760569). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Induced by methyl jasmonate (MeJA) (PubMed:28559313). Induced by infestation with the caterpillar Mamestra brassicae (PubMed:28559313). Induced by salt stress (PubMed:11351099). Down-regulated by UV-B (PubMed:17587374).
messages: The quadruple mutant jox1, jox2, jox3 and jox4 exhibit reduced root and shoot growth, delayed flowering, reduced seed production, constitutively elevated jasmonate and jasmonoyl-L-isoleucine levels, and enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae.

3702:AT5G65360
gene id: 3702:AT5G65360
uniprot id: A0A384L1I5
uniprot id: P59226
uniprot id: Q0WRA9
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Can be acetylated to form H3K9ac, H3K14ac, H3K18ac and H3K23ac. H3K9ac could compete with H3K9me and prevent gene silencing. H3K9acK14ac molecules are 30-fold less abundant than H3K9ac or H3K14ac. Very low level of H3K9meK14ac. H3K14 is specifically acetylated by HAG1 and deacetylated by HDA6. H3K9ac is deacetylated by HDT1. H3K9ac is restricted to euchromatin. H3K18ac, but not H3K9ac, is cell-cycle dependent and linked to replication. Reduced H4R3me2s increases H3K14ac in the FLC chromatin and activates or maintains its transcription. Vernalization decreases H3K9/14ac in the promoter region of FLC.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Expressed during the S phase.
messages: Expressed in inflorescences, buds and seedlings.
messages: In meta- and anaphase, H3T11ph is found on the entire length of the condensed chromosomes, whereas H3S10ph and H3S28ph are confined to the pericentromeric regions. During the first meiotic division, H3S10ph and H3S28ph are found on the entire length of the chromosome. Both sites may be involved in sister chromatid cohesion. No phosphorylation detected during interphase. AUR1 and AUR2 phosphorylate only H3S10, while AUR3 phosphorylates both H3S10 and H3S28.
messages: Mono-, di- or trimethylated to form mainly H3K4me1/2/3, H3K9me1/2/3, H3K27me1/2/3 and H3K36me1/2/3. Very low monomethylation at H3K18me1 or H3K23me1. H3K4me1/2/3, H3K9me3, H3K27me3 and H3K36me1/2/3 are typical marks for euchromatin, whereas heterochromatic chromocenters are enriched in H3K9me1/2 and H3K27me1/2. H3K27me3 is largely restricted to the transcribed regions of single genes and not associated with low-nucleosome density regions. SUVR1 to SUVR5, ASHH1 to ASHH3, ASHR1 to ASHR3, and ATXR5 and ATXR6 methylate H3, with ASHH2 methylating specifically H3K4 and H3K36 and ATXR5 and ATXR6 monomethylating specifically H3K27me1 (PubMed:35298257). The Su(var)3-9 homolog proteins (SUVH1 to SUVH10) are H3K9-specific methyltransferases. Among them, KRYPTONITE (SUVH4) is only involved in di- or trimethylation. Regarding H3K9, the major forms are H3K9me1 (20%) and H3K9me2 (10%), while H3K9me3 is rare (0.2%). H3K9me is controlled by DNA methylation and is not required for the formation of constitutive heterochromatin, but double methylation H3K9meK27me is required for the recruitment of CMT3 to methylate heterochromatin and silence euchromatic loci. Very low level of H3K9meK14ac. 60% of H3K27 is found under the form of H3K27me1, 16% of H3K27me2 and 5% of H3K27me3. When associated with H3K27me, H3K36 can only be mono- or di-methylated. H327me2K36me1 or H3K27me1K36me2 are both found in 3% of the proteins. When not associated with H3K27me, H3K36 is only trimethylated. H3K36me3 is found in 3% of the proteins. H2BK143ub1 is probably prerequisite for H3K4me. Elevated H3K4me3 and H3K36me2 formed by ASHH2 are required for high FLC expression. Vernalization increases H3K9me2 and H3K27me2/3 and decreases H3K4me2 at the FLC locus, resulting in the epigenetic silencing of this floral repressor.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. The H3K9meK27me dimethylated N-terminal tail of histone H3 can directly interact with the chromodomains of CMT3 and/or LHP1 (PubMed:11898023, PubMed:15457214). Interacts with ORTH2 (PubMed:17242155). Interacts (in absence of H3K27me) with TSK (PubMed:35298257).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4me1/2/3 = mono-, di- and trimethylated Lys-5; H3K9me1/2/3 = mono-, di- and trimethylated Lys-10; H3K9ac = acetylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14ac = acetylated Lys-15; H3K18ac = acetylated Lys-19; H3K18me1 = monomethylated Lys-19; H3K23ac = acetylated Lys-24; H3K23me1 = monomethylated Lys-24; H3K27me1/2/3 = mono-, di- and trimethylated Lys-28; H3S28ph = phosphorylated Ser-29; H3K36me1/2/3 = mono-, di- and trimethylated Lys-37.

3702:AT1G06520
gene id: 3702:AT1G06520
uniprot id: Q9SHJ5
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GPAT/DAPAT family.
messages: Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis. Involved in pollen development, by being required for tapetum differentiation and male fertility. In addition to the sporophytic effect, it also exerts a gametophytic effect on pollen performance.
messages: Highly expressed in developing siliques and flower buds. Weakly or not expressed in roots, seedlings and leaves.
messages: Membrane
messages: Mitochondrion
messages: Plants display a massive pollen development arrest due to a perturbed degeneration of the tapetum, which is associated with altered endoplasmic reticulum profiles and reduced secretion. Defects correlate with several fatty acid composition changes in flower tissues and seeds. However, no significant change in seed oil content is observed.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.

3702:AT1G16950
gene id: 3702:AT1G16950
uniprot id: Q9FZ54
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the C-terminally encoded plant signaling peptide (CEP) family.
messages: Extracellular signaling peptide that may regulate primary root growth rate and systemic nitrogen (N)-demand signaling.
messages: Induced by gibberellic acid (GA) but repressed by nitrogen (N) (PubMed:24179095). Accumulates in roots in response to nitrate and ammonium chloride NH(4)Cl depletion and to osmotic stress (e.g. mannitol). Repressed in shoots by nitrogen starvation (PubMed:24179096).
messages: Interacts with CEP receptors (e.g. CEPR1 and CEPR2).
messages: The mature small signaling peptide is generated by proteolytic processing of the longer precursor.
messages: apoplast

3702:AT2G26290
gene id: 3702:AT2G26290
uniprot id: O64842
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed specifically in roots.
messages: Induced in roots by exposure to air, abscisic acid (ABA) and salt treatment.
messages: May play a role in the signal transduction pathway of osmotic stress (Probable). May be involved in plant defense signaling (By similarity).

3702:AT1G72210
gene id: 3702:AT1G72210
uniprot id: A0A1P8ANA4
uniprot id: Q9C7T4
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT3G21070
gene id: 3702:AT3G21070
uniprot id: A0A178V8A4
uniprot id: A0A1I9LRY0
uniprot id: A0A1I9LRY1
uniprot id: F4IWD3
uniprot id: Q56YN3
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the NAD kinase family.
messages: By gamma radiation, hydrogen peroxide and infection by P.syringae.
messages: Expressed during development from young seedlings to flowering plants.
messages: Phosphorylates both NAD(+) and NADH, with a twofold preference for NADH. Source of the cellular reductant NADPH which is an important antioxidant factor.
messages: Ubiquitous.

3702:AT4G01880
gene id: 3702:AT4G01880
uniprot id: A0A1P8B515
uniprot id: A0A1P8B521
uniprot id: F4JG68
names: Function
names: Similarity
messages: Belongs to the methyltransferase TRM13 family.
messages: tRNA methylase which 2'-O-methylates cytidine(4) in tRNA(Pro) and tRNA(Gly)(GCC), and adenosine(4) in tRNA(His).

3702:AT3G61310
gene id: 3702:AT3G61310
uniprot id: A0A178VA95
uniprot id: Q8L7L5
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT4G25310
gene id: 3702:AT4G25310
uniprot id: A0A1P8B881
uniprot id: Q9SB32
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT5G06800
gene id: 3702:AT5G06800
uniprot id: A0A1P8BBX9
uniprot id: A0A2H1ZE52
uniprot id: A0A5S9Y475
uniprot id: Q0WVU3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MYB-CC family.
messages: Nucleus

3702:AT1G65570
gene id: 3702:AT1G65570
uniprot id: A0A654ELM9
uniprot id: O04474
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G52510
gene id: 3702:AT5G52510
uniprot id: Q9FYR7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in seedlings, roots, leaves and siliques.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT2G27145
gene id: 3702:AT2G27145
uniprot id: A0A5S9X1T4
uniprot id: P82724
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G17980
gene id: 3702:AT4G17980
uniprot id: O49697
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Induced by wounding in the flowering stem.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription factor involved in tissue reunion of wounded inflorescence stems. Required for the division of pith cells in the reunion process, which is dependent on polar-transported auxin and the wound-inducible hormones ethylene and jasmonate (PubMed:21911380). Binds to the promoters of XTH19 and XTH20 to induce their expression via auxin signaling. XTH19 and XTH20 are involved in cell proliferation in the tissue reunion process of incised stems (PubMed:25182467). Involved in hypocotyl graft union formation. Required for the auxin- mediated promotion of vascular tissue proliferation during hypocotyl graft attachment (PubMed:27986917).

3702:AT3G22010
gene id: 3702:AT3G22010
uniprot id: Q9LRK6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G22430
gene id: 3702:AT1G22430
uniprot id: A0A178WJG9
uniprot id: A0A1P8APY5
uniprot id: Q9SK86
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.

3702:AT4G21200
gene id: 3702:AT4G21200
uniprot id: O49561
names: Cofactor
names: Function
names: Induction
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the 2-beta-hydroxylation of gibberellins (GA) precursors, rendering them unable to be converted to active GAs. Hydroxylates the C20-GA GA12 and GA53, but is not active on C19-GAs, like GA1, GA4, GA9 and GA20.
messages: Up-regulated by auxin. Down-regulated by paclobutrazol.

3702:AT1G47530
gene id: 3702:AT1G47530
uniprot id: A0A1P8AUJ9
uniprot id: Q9SX83
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT3G23250
gene id: 3702:AT3G23250
uniprot id: Q9LTC4
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, leaves, stems and flowers (PubMed:17015446, PubMed:19161942). Expressed in stomatal guard cells (PubMed:19161942).
messages: Induced by abscisic acid (ABA) and drought stress (PubMed:19161942). Induced by salt stress (PubMed:19161942).
messages: Interacts with SCRM/ICE1.
messages: Nucleus
messages: Plants over-expressing MYB15 have improved drought and salt tolerance.
messages: Transcription factor involved in cold-regulation of CBF genes and in the development of freezing tolerance. May be part of a complex network of transcription factors controlling the expression of CBF genes and other genes in response to cold stress. Binds to the MYB recognition sequences in the promoters of CBF1, CBF2 and CBF3 genes (PubMed:17015446). Involved in drought and salt tolerance. May enhance expression levels of genes involved in abscisic acid (ABA) biosynthesis and signaling, as well as those encoding stress-protective proteins (PubMed:19161942).

3702:AT3G55530
gene id: 3702:AT3G55530
uniprot id: Q9M2S6
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase that acts as a positive regulator of abscisic acid-related stress signal transduction (PubMed:17573536, PubMed:18685183). Interacts with and ubiquitinates ATP1/SDIRIP1 to modulate ATP1/SDIRIP1 stability through the 26S proteasome pathway. Regulates abscisic acid (ABA) and salt stress responses by negatively affecting ATP1/SDIRIP1 stability. The SDIR1-ATP1/SDIRIP1 complex plays an important role in ABA signaling through the ubiquitination pathway (PubMed:25616872).
messages: Endoplasmic reticulum membrane
messages: Expressed at all developmental stages.
messages: Interacts with ATP1/SDIRIP1.
messages: Longer primary root and NaCl and ABA insensitivity.
messages: The RING-type zinc finger domain is required for E3 ligase activity.
messages: Ubiquitous.
messages: Up-regulated by salt and drought stress, but not by abscisic acid. The up-regulation is stronger and earlier when the roots are colonized by the endophytic fungus P.indica.

3702:AT2G27010
gene id: 3702:AT2G27010
uniprot id: Q9ZVD6
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT1G64800
gene id: 3702:AT1G64800
uniprot id: Q3ECI4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G52490
gene id: 3702:AT5G52490
uniprot id: Q9FHB3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily. Fibrillarin family.
messages: Component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles.
messages: Not detectable by RT-PCR.
messages: S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins. Involved in pre-rRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in pre-ribosomal RNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. Also acts as a protein methyltransferase by mediating methylation of 'Gln-105' of histone H2A (H2AQ105me), a modification that impairs binding of the FACT complex and is specifically present at 35S ribosomal DNA locus (By similarity).
messages: nucleolus

3702:AT4G17490
gene id: 3702:AT4G17490
uniprot id: Q8VZ91
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G68600
gene id: 3702:AT1G68600
uniprot id: Q93Z29
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Endoplasmic reticulum membrane
messages: Malate transporter.

3702:AT2G38230
gene id: 3702:AT2G38230
uniprot id: A0A178VZ00
uniprot id: O80448
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PdxS/SNZ family.
messages: Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by PDX2. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Also plays an indirect role in resistance to singlet oxygen-generating photosensitizers.
messages: Cytoplasm
messages: Expressed in flowers, shoots, leaves and weakly in roots.
messages: Homodimer or heterodimer with PDX1.2 or PDX1.3. Interacts with PDX2.
messages: Vitamin B6 is an essential quencher of singlet oxygen in plants, that can protect cellular membranes from lipid peroxidation.

3702:AT1G15550
gene id: 3702:AT1G15550
uniprot id: A0A5S9UM32
uniprot id: Q39103
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA3OX subfamily.
messages: Converts the inactive gibberellin (GA) precursors GA9 and GA20 into the bioactives gibberellins GA4 and GA1, respectively. Involved in the production of bioactive GA for vegetative growth and development.
messages: Expressed in germinating seeds and in very young seedlings. Expressed in developing siliques 3-13 days after pollination.
messages: Expressed in stems, roots, leaves, flowers, and siliques. Highly expressed near the nodes in stems and in the stamen filaments of flowers. Detected in developing cotyledons, vegetative shoot apical meristem and non-meristematic, non-elongation regions of the roots. Found in the cortex and the endodermis of the embryo axis in germinating seeds and in the placenta in developing siliques.
messages: Inhibited by GA3, indicating the existence of a probable feedback loop. Inhibited by dihydro gibberellins. Regulated by phytochrome. Induced sharply after red light pulse with a peak at 4 hours, and then decreases rapidly as germination occurs. Increases again when etiolated seedling growth begins. Not regulated by long day exposure or auxin. Up-regulated by cold treatment, paclobutrazol and uniconazole P.
messages: Semi-dwarf. Ga3ox1 and ga3ox2 double mutant has a severe defect in seed germination and root growth, and a dwarf phenotype.

3702:AT3G59850
gene id: 3702:AT3G59850
uniprot id: A0A1I9LP65
uniprot id: A0A654FJD1
uniprot id: Q5XF50
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G24520
gene id: 3702:AT4G24520
uniprot id: A0A178UWR2
uniprot id: F4JQY4
uniprot id: Q9SB48
names: Biotechnology
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NADPH--cytochrome P450 reductase family.
messages: Binds 1 FAD per monomer.
messages: Binds 1 FMN per monomer.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
messages: In the N-terminal section; belongs to the flavodoxin family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Saccharomyces cerevisiae expressing Glycyrrhiza uralensis CYP88D6 and CYP72A154, combined with the expression of Arabidopsis thaliana beta-amyrin synthase (beta-AS) and NADPH-cytochrome P450 reductase 1 (ATR1), accumulates glycyrrhetinic acid (GA) and, to lower levels, beta-amyrin; these GA production was increased in the presence of G.uralensis cytochrome b5 (CYB5).
messages: This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5.
messages: This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Reduces a variety of substrates in vitro, such as cytochrome c, feericyanide and dichloroindophenol.

3702:AT2G37540
gene id: 3702:AT2G37540
uniprot id: A0A178VUD5
uniprot id: A0A1P8B0R4
uniprot id: O80924
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT4G11050
gene id: 3702:AT4G11050
uniprot id: A0A1P8B3K9
uniprot id: A0A1P8B3L0
uniprot id: Q8L7I0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.
messages: Secreted

3702:AT5G03820
gene id: 3702:AT5G03820
uniprot id: A0A1P8BG41
uniprot id: A0A2H1ZE56
names: Similarity
messages: Belongs to the 'GDSL' lipolytic enzyme family.

3702:AT3G54140
gene id: 3702:AT3G54140
uniprot id: A0A178VD50
uniprot id: Q9M390
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Expressed in cotyledons, hypocotyls, leaves, roots, flowers, pistils and vascular tissue of sepals, anthers, carpels and funiculi. Not detected in seeds.
messages: Membrane
messages: Peptide transporter. Mediates the transport of di- and tripeptides. High affinity transporter with low selectivity. No transport of amino acids.
messages: Reduced growth and lower N content when cultivated on dipeptides. No effect on germination.

3702:AT4G05110
gene id: 3702:AT4G05110
uniprot id: A0A1P8B614
uniprot id: Q944N8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.
messages: By nitrogen deficiency and 5-fluorouracil plus methotrexate.
messages: Cell membrane
messages: Expressed in leaves and siliques.
messages: Membrane
messages: Nucleoside transporter that can mediate uptake of adenosine, uridine, guanosine or cytidine when expressed in a heterologous system (yeast).

3702:AT3G11180
gene id: 3702:AT3G11180
uniprot id: A0A654F604
uniprot id: F4J670
uniprot id: Q9SRM3
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: 2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway (PubMed:28559313). Converts JA to 12-hydroxyjasmonate (12OH-JA), an inactive form of JA (PubMed:28559313). Prevents over-accumulation of JA and indirectly its bioactive form JA-Ile under stress response (PubMed:28559313). Acts as negative regulator of JA-mediated defense signaling, by contributing to 12OH-JA accumulation, which represses JA defense responses upon infection by the fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae (PubMed:28559313).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed during pollen germination and pollen tube growth.
messages: Induced at low levels by wounding (PubMed:28760569). Induced by methyl jasmonate (MeJA), infection by the fungal pathogen Botrytis cinerea and infestation with the caterpillar Mamestra brassicae (PubMed:28559313).
messages: The quadruple mutant jox1, jox2, jox3 and jox4 exhibit reduced root and shoot growth, delayed flowering, reduced seed production, constitutively elevated jasmonate and jasmonoyl-L-isoleucine levels, and enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae.

3702:AT4G38495
gene id: 3702:AT4G38495
uniprot id: A0A178V509
uniprot id: Q8RWS0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the IES6 family.
messages: Component of the chromatin remodeling INO80 complex; specifically part of a complex module associated with the helicase ATP-binding and the helicase C-terminal domain of INO80 (PubMed:31418686). Interacts with ARP5 (PubMed:31418686).
messages: Cytoplasm
messages: Differential expression of several genes (PubMed:31418686). Compromised ethylene-induced H2A.Z eviction dynamics (PubMed:31418686). Plants missing both EEN and REF6/EIN6 (e.g. ref6-1 een-2 and ein6-1 een-1), are insensitive to ethylene (ET) and exhibit reduced levels of EIN2 associated with a shift of the chromatin landscape to a repressive state at its locus (e.g. H3K27me3 and H2A.Z) (PubMed:31418686).
messages: Expressed ubiquitously in seedlings.
messages: Nucleus
messages: Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair (By similarity). Together with REF6/EIN6, involved in the epigenetic chromatin-dependent regulatory mechanism that monitors the expression of the essential multifunctional plant stress regulator EIN2 via H3K27me3 repressive histone demethylation and histone variant H2A.Z eviction, thus modulating responses to ethylene (ET), especially during embryogenesis (PubMed:31418686). The INO80 complex controls ethylene-induced H2A.Z eviction dynamics (PubMed:31418686).

3702:AT1G78560
gene id: 3702:AT1G78560
uniprot id: A0A178WKG7
uniprot id: Q93YR2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
messages: May function as sodium-coupled metabolite transporter across the chloroplast envelope.
messages: Membrane
messages: chloroplast envelope

3702:AT2G21410
gene id: 3702:AT2G21410
uniprot id: A0A654EUT1
uniprot id: Q9SJT7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the V-ATPase 116 kDa subunit family.
messages: Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
messages: Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. Involved in vacuolar nutrient storage (e.g. accumulation and storage of nitrate) and in tolerance to some toxic ions (e.g. zinc ions sequestration in vacuoles).
messages: Expressed in etiolated seedlings hypocotyls.
messages: Membrane
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: Vacuole membrane
messages: When associated with VHA-a3 disruption, day-length-dependent growth retardation associated with a reduced accumulation and storage of nitrate ions in vacuoles. Increased sensitivity to zinc ions due to a lower zinc ions sequestration in vacuoles. Reduced calcium content. No effect on sensitivity to sodium ions.

3702:AT2G27280
gene id: 3702:AT2G27280
uniprot id: A0A654EWM6
uniprot id: Q9XIN5
names: Similarity
messages: Belongs to the NSRP1 family.

3702:AT4G36250
gene id: 3702:AT4G36250
uniprot id: A0A384K8S3
uniprot id: A4FVT2
uniprot id: Q70E96
names: Caution
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the aldehyde dehydrogenase family.
messages: Constituively expressed at low levels.
messages: Homotetramer.
messages: Not induced by abscisic acid (ABA), dehydration and salt stress.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G08820
gene id: 3702:AT1G08820
uniprot id: A0A178WBB7
uniprot id: B9DHD7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17) family.
messages: Endoplasmic reticulum membrane
messages: Interacts with cowpea mosaic virus (CPMV) NTP-binding protein (NTB).
messages: May play a role in vesicle trafficking.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G21270
gene id: 3702:AT2G21270
uniprot id: A0A5S9WZU6
uniprot id: A8MQW3
uniprot id: Q9SJV0
names: Similarity
messages: Belongs to the UFD1 family.

3702:AT4G10360
gene id: 3702:AT4G10360
uniprot id: Q93ZA9
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G65350
gene id: 3702:AT5G65350
uniprot id: A0A178UMK0
uniprot id: Q9FKQ3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity).
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA (By similarity).
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3702:AT4G01330
gene id: 3702:AT4G01330
uniprot id: A0A178V0V0
uniprot id: A0A178V2D4
uniprot id: A0A1P8B517
uniprot id: F4JI10
uniprot id: F4JI11
names: Caution
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G56440
gene id: 3702:AT3G56440
uniprot id: Q0WPK3
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat PROPPIN family.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Down-regulated during senescence.
messages: Expressed in roots, stems, flowers and leaves.
messages: Preautophagosomal structure membrane
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy (By similarity).
messages: The first protein part may form a beta-propeller domain involved in specific binding to phosphatidylinositol 3,5-bisphosphate (PIP2), leading to the association of the protein to the membrane.
messages: Vacuole membrane

3702:AT5G03380
gene id: 3702:AT5G03380
uniprot id: Q9LZF1
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HIPP family.
messages: Cell membrane
messages: Expressed in petioles, hypocotyls, peduncles, vascular bundles and root meristems.
messages: Heavy-metal-binding protein. Involved in the maintenance of heavy metal homeostasis and/or in detoxification.
messages: Up-regulated by cadmium, Hg, Fe and Cu, but not by Mn or Co.

3702:AT3G05890
gene id: 3702:AT3G05890
uniprot id: A0A384LMJ2
uniprot id: Q67Z65
uniprot id: Q9ZNS6
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0057 (PMP3) family.
messages: By low temperature. Also promoted by abscisic acid (ABA) and dehydration but is not a general response to stress conditions.
messages: Membrane

3702:AT5G59250
gene id: 3702:AT5G59250
uniprot id: A0A178UN85
uniprot id: Q0WWW9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: chloroplast membrane

3702:AT5G19910
gene id: 3702:AT5G19910
uniprot id: A0A178U9T7
uniprot id: Q8VYB1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 31 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
messages: Component of the Mediator complex.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G17530
gene id: 3702:AT5G17530
uniprot id: A0A1P8BGI7
uniprot id: A0A1P8BGJ0
uniprot id: F4KH14
uniprot id: Q8W4R0
names: Similarity
messages: Belongs to the phosphohexose mutase family.

3702:AT1G77290
gene id: 3702:AT1G77290
uniprot id: O80662
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily.
messages: Cell membrane
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.

3702:AT3G26125
gene id: 3702:AT3G26125
uniprot id: Q9LTN1
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G48480
gene id: 3702:AT3G48480
uniprot id: A0A654FFV9
uniprot id: F4JF18
names: Similarity
messages: Belongs to the peptidase C48 family.

3702:AT5G55140
gene id: 3702:AT5G55140
uniprot id: A0A178U792
uniprot id: Q8L908
names: Similarity
messages: Belongs to the universal ribosomal protein uL30 family.

3702:AT3G10850
gene id: 3702:AT3G10850
uniprot id: A0A654FGG9
uniprot id: O24496
uniprot id: Q0WQY6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
messages: Binds 1 Fe(2+) or Fe(3+) and 1 Zn(2+) ion per subunit, catalysis is optimal with 1 Fe and 1 Zn. Electron spin resonance indicates the presence of a mixture of protein molecules that contain either Fe(2+) or Fe(3+) and Zn(2+). Mn(2+) is not a cofactor (PubMed:19834746).
messages: Cytoplasm
messages: Homodimer.
messages: Mainly expressed in flowers and flower buds. Also detected in roots and leaves.
messages: Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.

3702:AT4G22212
gene id: 3702:AT4G22212
uniprot id: Q94AZ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G14140
gene id: 3702:AT4G14140
uniprot id: O23273
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
messages: Expressed at low levels in vegetative and floral organs.
messages: Maintains chromatin CpG methylation that plays a role in genomic imprinting, regulation of embryogenesis and seed viability. Required for proper patterns of CG DNA methylation in dividing cells (By similarity).
messages: Nucleus

3702:AT1G02130
gene id: 3702:AT1G02130
uniprot id: P28188
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Does not interact with GC5.
messages: Golgi apparatus membrane
messages: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER).
messages: trans-Golgi network membrane

3702:AT5G24660
gene id: 3702:AT5G24660
uniprot id: Q9FIR9
names: Disruption Phenotype
names: Function
names: Induction
messages: By stressful environmental conditions such as salt stress, AgNO(3), and sulfur deficiency (PubMed:15842617, PubMed:25628631). Induced during oxidative stress (PubMed:25628631). Accumulates at the beginning of an extended night, which may indicate that it is induced by carbon starvation and in response to sugar (PubMed:25628631). Induced by a combination of light and plastid signaling (PubMed:22383539).
messages: Enhanced tolerance to osmotic stress (PubMed:23517122). Increased susceptibility to pathogens such as P.syringae and H.arabidopsidis (PubMed:21798943).
messages: May be involved in defense responses monitoring (PubMed:21798943). Probably implicated into osmotic stress signaling (PubMed:23517122).

3702:AT5G07990
gene id: 3702:AT5G07990
uniprot id: A0A178UNZ9
uniprot id: Q9SD85
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By UV light treatment.
messages: Catalyzes the 3'-hydroxylation of the flavonoid B-ring to the 3',4'-hydroxylated state. Convert naringenin to eriodictyol and dihydrokaempferol to dihydroquercetin.
messages: Endoplasmic reticulum membrane
messages: High expression in siliques and to a lower extent in stems, flowers and senescing leaves.
messages: May act as a membrane anchor for localization of other, soluble, flavonoid enzymes to the endoplasmic reticulum.

3702:AT1G72530
gene id: 3702:AT1G72530
uniprot id: Q9CAH0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MORF family.
messages: Heterodimers with MORF8/RIP1, MORF5/RIP5 and MORF6/RIP6.
messages: Involved in organellar RNA editing. Required for the processing of few RNA editing sites in mitochondria.
messages: Mitochondrion

3702:AT4G25560
gene id: 3702:AT4G25560
uniprot id: Q9M0K4
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds to FHY1 and FHL (PubMed:19482971). Interacts with COP1.
messages: By hormones or elicitors treatment. By exposure to abiotic stress.
messages: Expressed at very low level. Expressed in cauline leaves.
messages: Nucleus speckle
messages: Partially blind to far-red (FR). Impaired inhibition of hypocotyl elongation and cotyledons expansion under continuous FR light conditions.
messages: Transcription factor that promotes photomorphogenesis in the light by participating in the transmission of phytochrome A (phyA) signals to downstream responses (PubMed:11581165, PubMed:19482971). Probably acts by activating expression of light-induced genes. In darkness, its degradation prevents the activation of light-induced genes (PubMed:11581165).
messages: Ubiquitinated by COP1. Ubiquitination takes place in darkness and leads to its subsequent degradation, thereby preventing to activate photomorphogenesis signals. Ubiquitination is stimulated by SPA1.

3702:AT5G40640
gene id: 3702:AT5G40640
uniprot id: A0A178UPN8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G05165
gene id: 3702:AT3G05165
uniprot id: A0A1I9LTG5
uniprot id: A0A654F9J0
uniprot id: B9DGB5
uniprot id: F4J661
uniprot id: Q94AF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT4G07950
gene id: 3702:AT4G07950
uniprot id: A0A654FM67
uniprot id: Q9ZQC0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
messages: Component of the RNA polymerase III (Pol III) complex consisting of 17 subunits.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: nucleolus

3702:AT2G20790
gene id: 3702:AT2G20790
uniprot id: A0A1P8AYQ6
uniprot id: F4IFJ0
uniprot id: Q8W0Z6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes medium subunit family.
messages: Cytoplasmic vesicle membrane
messages: Membrane
messages: Probably part of the adaptor protein complex 5 (AP-5).

3702:AT3G44680
gene id: 3702:AT3G44680
uniprot id: Q8H0W2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone deacetylase family. HD type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Interacts with AHL22 (PubMed:22442143). Binds to farnesylated ASG2 in the cytosol (PubMed:28663238).
messages: Nucleus
messages: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
messages: cytosol

3702:AT1G71840
gene id: 3702:AT1G71840
uniprot id: A0A178WIN8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G72300
gene id: 3702:AT1G72300
uniprot id: A0A5S9WRN9
uniprot id: C0LGI8
uniprot id: Q9C7S5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed ubiquitously, including in the shoot apical meristem and in the elongation zone of the root meristem.
messages: Homo- and heterodimers with PSKR1. Interacts (via C-terminus) with AHA1 and AHA2 (via the R-domain).
messages: Loss of sensitivity to PSY1 (PubMed:17989228). Loss of PSY1 induced phosphorylation of AHA2 and reduced hypocotyl elongation (PubMed:25267325). Increased symptom formation, disease index, lesion size and fungal growth after infection with A.brassicicola, but increased resistance to bacterial infection (PubMed:23062058).
messages: PSYR1 and PSKR1 mediate a signaling pathway by two distinct ligands, which redundantly contribute to cellular proliferation and plant growth.
messages: Tyrosine-sulfated glycopeptide receptor with a serine/threonine-protein kinase activity (PubMed:17989228, PubMed:25267325). Regulates, in response to tyrosine-sulfated glycopeptide binding, a signaling cascade involved in cellular proliferation and plant growth (PubMed:17989228). Not involved in PSK perception (PubMed:17989228). Involved in plant immunity, with antagonistic effects on bacterial and fungal resistances (PubMed:23062058). Mediates activation of the plasma membrane H(+)-ATPase by PSY1 (PubMed:25267325). Phosphorylates AHA2 at Thr-881 (PubMed:25267325).

3702:AT3G17700
gene id: 3702:AT3G17700
uniprot id: Q9LD37
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Homotetramer or heterotetramer.
messages: Probable cyclic nucleotide-gated ion channel.
messages: chloroplast thylakoid membrane

3702:AT5G46680
gene id: 3702:AT5G46680
uniprot id: Q56XR6
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G30540
gene id: 3702:AT3G30540
uniprot id: Q9LW44
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 5 (cellulase A) family.
messages: Could be the product of a pseudogene.
messages: Secreted

3702:AT1G71830
gene id: 3702:AT1G71830
uniprot id: A0A178W829
uniprot id: Q94AG2
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Dual specificity kinase acting on both serine/threonine- and tyrosine-containing substrates. Phosphorylates BRI1 on 'Ser-887' and CDC48 on at least one threonine residue and on 'Ser-41'. Confers embryogenic competence. Acts redundantly with SERK2 as a control point for sporophytic development controlling male gametophyte production. Involved in the brassinolide signaling pathway. Probably required during small peptide (e.g. RGF1) signaling (Probable). Involved in the perception of phytosulfokine and subsequent signal transduction (PubMed:26308901). Acts as a RLK5 coreceptor and promotes high-affinity IDA sensing, thus being a positive regulator of floral abscission (PubMed:27058169).
messages: Endoplasmic reticulum membrane
messages: Expressed during pollen development and megasporogenesis in the nucellus of developing ovules, in all cells of the embryo sac up to fertilization and in all cells of the developing embryo until the heart-shaped stage. Found in epidermal and vascular cells of the late torpedo and cotyledon stages embryos.
messages: Expressed in flowers, tapetum, developing microspores, all cells of the embryo sac, provascular strands and developing vascular bundles. Low expression in adult vascular tissue. Detected in root meristem.
messages: Glycosylated. Important for targeting to the plasma membrane.
messages: Inhibited by manganese.
messages: Intermolecular autophosphorylation. The catalytic activity of SERK1 depends on the presence of a phosphorylated Thr residue in SERK1. The phosphorylation is induced by brassinosteroids. Transphosphorylation by BRI1 occurs only on Ser-299 and Thr-462. Dephosphorylation of threonine residues by the kinase-associated protein phosphatase (KAPP) is involved in SERK1 endocytosis.
messages: Monomer, homo- and heterodimer. Interacts with KAPP, CDC48A, GRF6 or GRF7, SERK2, BRI1 and SERK3/BAK1 to form the SERK1 signaling complex. Bind to BRI1 in a brassinolide-dependent manner (PubMed:23929946). Heterodimer with PSKR1 (PubMed:26308901). Interacts with the EF-Tu receptor EFR and FLS2 in a specific ligand-induced manner. Interacts with ERECTA in a EPF2-induced manner. Interacts with ERL1 in a EPF1-induced manner. Interacts with TMM (PubMed:26320950). In the presence of the signal peptide RGF1, interacts with RGI1/RGFR4/RCH2, RGI2/RGFR3/RCH1, RGI3/RGFR1, RGI4/RGFR2/SKM2 and RGI5/RGFR5 (PubMed:27229311).
messages: No visible phenotype. Serk1 and serk2 double mutants are completely male sterile due to a failure in tapetum specification. Delayed floral abscission (PubMed:27058169).
messages: Seems to be related with early development of tissues in general rather than with embryogenesis.
messages: The extracellular domain (26-234) is required for dimerization.

3702:AT1G48600
gene id: 3702:AT1G48600
uniprot id: A0A178WLJ9
uniprot id: Q944H0
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. PEAMT family.
messages: Catalyzes N-methylation of phosphomonomethylethanolamine and phosphodimethylethanolamine, the two methylation steps required to convert phosphomonoethanolamine to phosphocholine. Unlike NMT1, NMT2 cannot utilize phosphoethanolamine as substrate in vitro.
messages: Cytoplasm
messages: No visible phenotype under normal growth conditions.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G09660
gene id: 3702:AT5G09660
uniprot id: A0A178UMW0
uniprot id: A0A1P8BBQ0
uniprot id: A8MRP1
uniprot id: B3H560
uniprot id: F4KDZ4
uniprot id: Q9ZP05
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organelle compartments (Probable). Peroxisomal NAD-dependent malate dehydrogenase involved in fatty acid beta-oxidation. Reoxidizes NADH from the beta-oxidation and provides NAD for the conversion of fatty acyl-CoA to acetyl-CoA. Does not participate directly in the glyoxylate cycle (PubMed:17376163, PubMed:19812894). Required for maintenance of photosynthetic rates under photorespiratory conditions, and carbon flow during photorespiration. Supplies NADH reductant to the peroxisomal hydroxypyruvate reductase (HPR), which reduces hydroxypyruvate into glycerate in the photorespiratory cycle (PubMed:18685043).
messages: Expressed in rosette leaves.
messages: Homodimer.
messages: No visible phenotype under normal growth conditions, but the double mutant plants pmdh1 and pmdh2 show seedling growth arrest 5 days after seed imbibition.
messages: Peroxisome

3702:AT5G67260
gene id: 3702:AT5G67260
uniprot id: A0A1P8BEM5
uniprot id: A0A654GEV1
uniprot id: Q9FGQ7
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin D subfamily.
messages: Expressed in developing vegetative and floral primordia.
messages: Interacts with CDKA-1.
messages: Promotes divisions in the guard cells (GCs) after the guard mother cells (GMC) symmetric division when in the presence of CDKA-1.

3702:AT1G19340
gene id: 3702:AT1G19340
uniprot id: A0A654EB84
uniprot id: Q8LFA9
names: Function
names: Similarity
messages: Belongs to the MT-A70-like family.
messages: Probable methyltransferase.

3702:AT3G04740
gene id: 3702:AT3G04740
uniprot id: A0A654F9D6
uniprot id: Q9SR02
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Mediator complex subunit 14 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in defining the duration of cell proliferation.
messages: Component of the Mediator complex.
messages: Component of the Mediator complex. Interacts with CDKE-1, HDA19 and LUG.
messages: During embryogenesis, detected in all cells from the early octant to the torpedo stage.
messages: Dwarf plants with disorganized shoot apical meristem, stem fasciation, abnormal floral structure, delayed flowering and sterile flowers. Reduced cell numbers in aerial organs.
messages: Expressed in roots, stems, developing embryos, young leaf primordia, shoot apical meristems, inflorescence meristems, tapetum in anthers, ovules and floral organ primordia, but not in mature organs.
messages: Nucleus

3702:AT3G44510
gene id: 3702:AT3G44510
uniprot id: A0A384KFF1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G01110
gene id: 3702:AT2G01110
uniprot id: A0A178VUB7
uniprot id: Q9SJV5
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: According to PubMed:18930082, TATA is detectable only in minor amounts in Arabidopsis chloroplasts.
messages: Belongs to the TatC family.
messages: In thylakoid membranes, TATC and TATB form a large receptor complex, containing about eight TATC-TATB pairs, which binds the precursor protein. Twin arginine signal peptide promotes pH-triggered docking of TATA oligomers to TATC-TATB receptor complex, inducing a conformational switch of TATA that results in activation of the translocase. TATA dissociates from TATC-TATB upon completion of translocation.
messages: Membrane
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.
messages: Seedling lethality when homozygous. When grown on agar medium, mutant seedlings have an albino phenotype and contain plastid lacking internal membrane structures.
messages: chloroplast thylakoid membrane

3702:AT2G40310
gene id: 3702:AT2G40310
uniprot id: Q9S761
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G57440
gene id: 3702:AT5G57440
uniprot id: Q8VZP1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a glycerol-3-phosphatase with higher stereospecificity for L-glycerol-3-phosphate than DL-glycerol-3-phosphate.
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.
messages: Cytoplasm
messages: Ubiquitous with highest expression in siliques. Mainly restricted to the meristem of immature flower and vascular elements of the root, shoot, leave, siliqua and developing embryo (at the protein level).

3702:AT3G04440
gene id: 3702:AT3G04440
uniprot id: A0A1I9LLK0
uniprot id: Q9M843
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CTL (choline transporter-like) family.
messages: Cell membrane
messages: Choline transporter.
messages: Membrane

3702:AT3G44860
gene id: 3702:AT3G44860
uniprot id: Q9FYC4
names: Activity Regulation
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by Mn(2+) ions. Strongly inhibited by Cu(2+), Zn(2+), Fe(3+) and Fe(2+) ions. Moderately inhibited by Na(+) and Ca(2+) ions. Rapidly degraded at temperatures above 40 degrees Celsius.
messages: Belongs to the methyltransferase superfamily. SABATH family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.
messages: Induced in the presence of the herbivory P.xylostella larvae (PubMed:14617060). Accumulates slighty in response to wounding and to several defense responses-inducing compounds including salicylic acid (SA), jasmonic acid (MeJA) and alamethicin (Ala), an antibiotic peptide of fungal origin (PubMed:16165084).
messages: May catalyze the production of the insect juvenile hormone methyl farnesoate (MeFA) to trigger defense against insect herbivory.
messages: Mostly expressed in leaves and, at very low levels, in roots, stems, flowers and siliques.

3702:AT1G54560
gene id: 3702:AT1G54560
uniprot id: A0A178WJA4
uniprot id: A0A384LJH0
uniprot id: F4HWY6
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily.
messages: Cytoplasm
messages: Homodimer.
messages: IQ domain mediates interaction with calmodulin.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Involved in trafficking of Golgi stacks, mitochondria and peroxisomes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: The tail domain is a globular cargo-binding domain.

3702:AT4G31760
gene id: 3702:AT4G31760
uniprot id: A0A178UVF1
uniprot id: O81772
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT2G01440
gene id: 3702:AT2G01440
uniprot id: F4INA9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the helicase family. RecG subfamily.
messages: Critical role in recombination and DNA repair.
messages: chloroplast

3702:AT2G31770
gene id: 3702:AT2G31770
uniprot id: A0A5S9X301
uniprot id: Q9SKC3
names: Cofactor
names: Domain
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT5G41160
gene id: 3702:AT5G41160
uniprot id: A0A2H1ZE88
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT1G22300
gene id: 3702:AT1G22300
uniprot id: A0A178W0Z4
uniprot id: A0A654EMV4
uniprot id: B9DFR1
uniprot id: F4I1C1
uniprot id: P48347
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: Cytoplasm
messages: Interacts with DREB1A and DREB1B in the nucleus (PubMed:28344081). Interacts with CINV1 (PubMed:25256212).
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
messages: Nucleus

3702:AT5G04200
gene id: 3702:AT5G04200
uniprot id: Q9FYE1
names: Activity Regulation
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase C14B family.
messages: Cysteine protease that cleaves specifically after arginine or lysine residues. Does not cleave caspase-specific substrates. Required for proteolytic processing of GRI (PubMed:25398910).
messages: Expressed in root tips, cauline leaves, flowers and siliques.
messages: Inhibited by serpin ZX and nitric oxide through cysteine nitrosylation.
messages: S-nitrosylation at Cys-147 suppresses both autoprocessing and proteolytic activity of the full-length protein, but does not affect the activity of the mature processed form.
messages: The two subunits are derived from the precursor sequence by an autocatalytic mechanism.
messages: apoplast

3702:AT1G12110
gene id: 3702:AT1G12110
uniprot id: A0A178W8F7
uniprot id: Q05085
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a high-affinity nitrate transporter when phosphorylated and as a low-affinity transporter when dephosphorylated. Forms homodimer when unphosphorylated and monomer when phosphorylated. Low nitrogen concentration in the medium stimulates phosphorylation. Phosphorylation also regulates the nitrate signaling.
messages: Altered development of nascent organs. Reduced stomatal opening and reduced transpiration rates in the light resulting in enhanced drought tolerance. Slower translocation of nitrate to the leaves.
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: By nitrate and auxin.
messages: Dual affinity nitrate transporter. Involved in proton-dependent nitrate uptake and in the regulation of the nitrate transporter NRT2.1. Acts also as a nitrate sensor that trigger a specific signaling pathway stimulating lateral root growth and seed germination. The uptake activity is not required for sensor function. Displays an auxin transport facilitation inhibited by high nitrate concentration. Required to prevent auxin accumulation in preemerged lateral root primordia and young lateral roots when external nitrate concentration is low or null. May be involved in the basipetal transport of auxin out of the lateral root tips. Acts as a bidirectional transporter involved in root-to-shoot nitrate translocation. Recognizes specifically nitrate and chlorate, but not nitrite, alanine, sulfate, phosphate or the di-peptide Ala-Ala.
messages: Expressed in the columella root cap at day 1 after germination. At day 3, detected in the root meristematic region and at day 5, expressed throughout the root tip.
messages: Expressed in the stele in lateral root primordia before emergence and in the tip of primary and emerged lateral roots. Detected in emerging and immature leaves, guard cells, flower buds, style, stigma, anthers and pollen grains. Not detected in the shoot apical meristem.
messages: Membrane
messages: Monomer and homodimer. The dimer has the 2 monomers in the same orientation. Interacts with CIPK23.
messages: The kinase CIPK23 is a negative regulator of the high-affinity response, while the kinase CIPK8 is a positive regulator of the low-affinity response. Thr-101 is not the direct target of CIPK8.
messages: When mutated confers resistance to the herbicide chlorate.

3702:AT3G04130
gene id: 3702:AT3G04130
uniprot id: Q9M8W9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G50790
gene id: 3702:AT5G50790
uniprot id: A0A178UTH6
uniprot id: Q9LUE3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SWEET sugar transporter family.
messages: Cell membrane
messages: Forms heterooligomers with SWEET8.
messages: Induced by the pathogenic bacteria P.syringae pv. tomato.
messages: Mediates both low-affinity uptake and efflux of sugar across the membrane.
messages: Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
messages: Membrane

3702:AT5G20270
gene id: 3702:AT5G20270
uniprot id: A0A178UFR5
uniprot id: Q93ZH9
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ADIPOR family.
messages: By abscisic acid (ABA), salt, osmotic and drought stresses.
messages: Expressed in roots, hypocotyls, vasculature of cotyledons and leaves, hydathodes and guard cells. In reproductive organs, expressed in trichomes, veins of sepals, stamens and stigmata of pistils.
messages: Interacts (via N-terminus) with SCRM/ICE1.
messages: May act as a negative regulator of abscisic acid (ABA)-mediated osmotic stress signaling and function in cross-talk between cold and osmotic signaling.
messages: Membrane
messages: Reduced apical meristem dominance and length of hypocotyl, and increased cotyledon curling. Mutant plants are hypersensitive to ABA and osmotic stress.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G25550
gene id: 3702:AT5G25550
uniprot id: Q4PSE6
names: Function
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in flowers and pollen.
messages: Hydroxylated on proline residues in the S-P-P-P-P repeat.
messages: Modulates cell morphogenesis by regulating cell wall formation and assembly, and/or growth polarization.
messages: O-glycosylated on hydroxyprolines.
messages: cell wall

3702:AT1G18880
gene id: 3702:AT1G18880
uniprot id: A0A178WEW3
uniprot id: Q9M9V7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Decreased nitrate content in root phloem exudates. Enhanced root-to shoot nitrate transport and plant growth under high nitrate conditions.
messages: Expressed in roots, stems and major veins of the leaves. Detected in the companion cells of the root phloem.
messages: Low-affinity nitrate transporter facilitating nitrate loading into root phloem. Not involved in dipeptides transport, but has a weak glucosinolate transport activity.
messages: Up-regulated by nitrate after long time exposure.

3702:AT5G61600
gene id: 3702:AT5G61600
uniprot id: A0A654GD59
uniprot id: Q9FKG1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G46140
gene id: 3702:AT3G46140
uniprot id: A0A654FDD1
uniprot id: Q9LX81
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT3G02493
gene id: 3702:AT3G02493
uniprot id: Q6X5U1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Mostly expressed in stems and, to a lower extent, in roots and leaves.
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, including leaves shape, pedicule elongation, inflorescence organization and fruit maturation, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT1G10290
gene id: 3702:AT1G10290
uniprot id: A0A178WBB3
uniprot id: Q9SE83
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
messages: Binds PtdIns3P (PubMed:12207647). Interacts with SH3P3 (via SH3 domain) and (via C-terminus) with GAMMA-ADR (PubMed:12207647). May homooligomerize or heterooligomerize (PubMed:14750520).
messages: Golgi apparatus membrane
messages: Increased GTPase activity in the presence of phosphatidic acid.
messages: Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P).
messages: The PH domain binds phospholipids. The PRD1 motif (721-728) is necessary for the interaction with SH3P3.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: clathrin-coated vesicle
messages: cytosol
messages: phragmoplast

3702:AT1G12230
gene id: 3702:AT1G12230
uniprot id: A0A5S9U222
uniprot id: F4IC59
uniprot id: Q9FWX0
names: Similarity
messages: Belongs to the transaldolase family. Type 1 subfamily.

3702:AT1G11680
gene id: 3702:AT1G11680
uniprot id: A0A178WII3
uniprot id: Q9SAA9
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Decreased expression of CYP51G1 by antisense leads to a semidwarf phenotype in the early growth stage and a longer life span. Disruption mutants accumulate obtusifoliol and 14-alpha-methyl-sterols and cannot be rescued by exogenous application of brassinosteroids.
messages: Expressed in leaves, roots, stems, siliques, flowers, flower buds and seedlings.
messages: Involved in sterol biosynthesis. Catalyzes the 14-alpha demethylation of obtusifoliol to 4 alpha-methyl-5 alpha-ergosta-8,14,24(28)-trien-3 beta-ol.
messages: Lack of membrane integrity. Seedling lethality.
messages: Membrane

3702:AT1G23020
gene id: 3702:AT1G23020
uniprot id: A0A1P8ATB2
uniprot id: A0A1P8ATD5
uniprot id: F4I4K7
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ferric reductase (FRE) family.
messages: Expressed in root steele. Detected in shoots, leaves, stems, siliques, flowers and cotyledons.
messages: Ferric chelate reductase involved in iron reduction in roots. May participate in the transport of electrons to a Fe(3+) ion via FAD and heme intermediates.
messages: It is not clear whether or not FRO3 functions in iron import to mitochondria or is involved in iron efflux to the cytosol.
messages: May be due to intron retention.
messages: Membrane
messages: Mitochondrion membrane
messages: Up-regulated in roots and shoots by iron deficiency and copper deficiency.

3702:AT3G27331
gene id: 3702:AT3G27331
uniprot id: B3H5H4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G05400
gene id: 3702:AT1G05400
uniprot id: A0A178W5I9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G22670
gene id: 3702:AT1G22670
uniprot id: A0A178WJS9
uniprot id: F4I2Y3
names: Function
names: Subcellular Location Annotation
messages: Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) (By similarity).
messages: Membrane
messages: Prevacuolar compartment membrane
messages: Protein storage vacuole membrane

3702:AT2G18760
gene id: 3702:AT2G18760
uniprot id: A0A178VUI7
uniprot id: Q9ZV43
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates after genotoxic agents treatment such as bleomycin (BLM), a small peptide that create DNA double strand breaks (DSBs).
messages: Belongs to the SNF2/RAD54 helicase family.
messages: Essential factor involved in transcription-coupled nucleotide excision repair (TCR) which allows RNA polymerase II-blocking lesions to be rapidly removed from the transcribed strand of active genes. Upon DNA-binding, it locally modifies DNA conformation by wrapping the DNA around itself, thereby modifying the interface between stalled RNA polymerase II and DNA. It is required for transcription-coupled repair complex formation.
messages: Homodimer. Binds DNA.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G07040
gene id: 3702:AT3G07040
uniprot id: Q39214
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the disease resistance NB-LRR family.
messages: Cell membrane
messages: Disease resistance (R) protein that specifically recognizes the AvrRpm1 type III effector avirulence protein from Pseudomonas syringae (PubMed:9861059). Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein (PubMed:9861059). That triggers a defense system including the hypersensitive response (HR), which restricts the pathogen growth (PubMed:9861059). Acts via its interaction with RIN4, and probably triggers the plant resistance when RIN4 is phosphorylated by AvrRpm1. It is then degraded at the onset of the hypersensitive response (PubMed:9861059).
messages: Endomembrane system
messages: Interacts directly with RIN4 via its N-terminal region. Interacts (via N-terminus) with RIN2 and RIN3 (via C-terminus). Interacts with TIP49A, a protein known to interact with the TATA binding protein complex (TBP) (PubMed:11955429, PubMed:12062092, PubMed:16212605). Binds to MORC1/CRT1 (PubMed:20332379). Interacts, via its NB-ARC domain, with RIN13 (PubMed:15722472).
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT2G32070
gene id: 3702:AT2G32070
uniprot id: Q9SKZ2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).

3702:AT2G19380
gene id: 3702:AT2G19380
uniprot id: O64571
names: Function
names: Subcellular Location Annotation
messages: May regulate the turnover of mRNAs in the nucleus.
messages: Nucleus

3702:AT2G28920
gene id: 3702:AT2G28920
uniprot id: A0A178VRU9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G03110
gene id: 3702:AT1G03110
uniprot id: A0A178VZV6
uniprot id: Q93WD7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat TRM82 family.
messages: Forms a heterodimer with the catalytic subunit.
messages: Nucleus
messages: Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

3702:AT3G12990
gene id: 3702:AT3G12990
uniprot id: A0A178VEU1
uniprot id: A0A384LNX5
uniprot id: A0A5S9XCZ7
uniprot id: Q9LDM2
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RNase PH family.
messages: Cytoplasm
messages: Expressed in roots, leaves, stems, buds and siliques.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Probable 3'->5' exoribonuclease involved in the regulation of cuticular wax biosynthesis. Can perform exosomal functions and partially complement the yeast rrp45 null mutant.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G73030
gene id: 3702:AT1G73030
uniprot id: Q9SSM4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF7 family.
messages: Cytoplasm
messages: Endosome membrane
messages: Interacts with CHMP1A and LIP5 (PubMed:20663085). Interacts with VPS2.2 (PubMed:22010978).
messages: Involved in ESCRT-dependent multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Mediates the MVB sorting of the auxin carriers PIN1, PIN2 and AUX1. Required for embryonic axis establishment and seedling growth (PubMed:19304934). Required for autophagic degradation of plastid proteins. Promotes the efficient sequestration of cargo from plastids into autophagosomes. Mediates the efficient delivery of autophagic plastid bodies to the vacuole, but not into the cytoplasm (PubMed:25649438).
messages: No visible phenotype under normal growth conditions, but double mutants chmp1a and chmp1b show embryo development defect.

3702:AT1G28320
gene id: 3702:AT1G28320
uniprot id: Q8VZD4
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase S1B family.
messages: Inhibited by N-methylmaleimide (NEM), but not by E64, benzamidine, aprotinin, leupeptin, pefabloc, pepstatin A, EGTA, EDTA and 1,10-phenanthroline.
messages: Monomer and homodimer. Multimerization requires calcium ions (By similarity).
messages: No visible phenotype, but loss of processing of glyoxysomal precursor proteins. Increased resistance to the herbicide precursor 4-(2,4-dichlorophenoxy) butyric acid (2,4-DB) and to the inhibitory effects of indole-3-butyric acid (IBA) on root elongation.
messages: Peroxisome
messages: Trypsin-like serine endopeptidase involved in the processing of glyoxysomal higher molecular weight precursor. The dimeric form carries out the specific cleavages needed to remove PTS2-containing presequences, whereas the monomeric form degrades the removed presequences and misfolded proteins (Probable). Not required for degradation of glyoxylate cycle enzymes during seedling development.

3702:AT2G34520
gene id: 3702:AT2G34520
uniprot id: A0A178VXC2
uniprot id: Q9SMX4
names: Similarity
messages: Belongs to the universal ribosomal protein uS14 family.

3702:AT4G20610
gene id: 3702:AT4G20610
uniprot id: A0A178UZA6
uniprot id: P0CJ49
uniprot id: P0CJ50
uniprot id: P0CJ51
uniprot id: P0CJ52
uniprot id: P0CJ53
uniprot id: P0CJ54
uniprot id: P0CJ55
uniprot id: P0CJ56
uniprot id: P0CJ57
uniprot id: P0CJ58
uniprot id: P0CJ59
uniprot id: P0CJ60
uniprot id: P0CJ61
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35635
gene id: 3702:AT2G35635
uniprot id: Q8RUC6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Appears to function as a stable post-translational protein modifier.
messages: Belongs to the ubiquitin family.
messages: Cytoplasm
messages: Expressed in leaves, stems and flowers.
messages: Forms a thiol ester with the heterodimer AXR1/ECR1.
messages: Nucleus
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT5G50650
gene id: 3702:AT5G50650
uniprot id: Q9FGP3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat SEC12 family.
messages: Endoplasmic reticulum membrane
messages: Involved in the transport from the endoplasmic reticulum to the plasma membrane.

3702:AT1G08230
gene id: 3702:AT1G08230
uniprot id: F4HW02
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: By wounding and senescence.
messages: Cell membrane
messages: High affinity gamma-aminobutyric acid (GABA) transporter probably involved in GABA uptake into cells. When expressed in a heterologous system (Xenopus oocytes), imports GABA, butylamine, beta- and L-Alanine, 5-aminovaleric acid, 6-aminocaproic acid and 8-aminocaprylic acid, but does not mediate the transport of proline or glycine betaine.
messages: Highly expressed in flowers and at lower levels in roots, leaves and stems.

3702:AT1G11765
gene id: 3702:AT1G11765
uniprot id: A0A178WCG2
uniprot id: Q9SAA0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G09510
gene id: 3702:AT5G09510
uniprot id: A8MQ96
uniprot id: Q9FY64
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Cytoplasm

3702:AT5G37490
gene id: 3702:AT5G37490
uniprot id: Q5PNY6
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT3G04230
gene id: 3702:AT3G04230
uniprot id: Q9M8X9
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

3702:AT2G21190
gene id: 3702:AT2G21190
uniprot id: Q9SKP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERD2 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G54940
gene id: 3702:AT3G54940
uniprot id: A0A178V5N1
uniprot id: A0A1I9LTT3
uniprot id: Q8VYS0
names: Function
names: Similarity
messages: Belongs to the peptidase C1 family.
messages: Probable thiol protease.

3702:AT2G04910
gene id: 3702:AT2G04910
uniprot id: A0A178VVB3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G40180
gene id: 3702:AT2G40180
uniprot id: F6LPR7
uniprot id: Q9XEE8
names: Cofactor
names: Sequence Caution
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Probable cloning artifact leading to a large internal deletion.

3702:AT4G32820
gene id: 3702:AT4G32820
uniprot id: A0A1P8B5K4
uniprot id: A0A654FV02
uniprot id: F4JV59
uniprot id: F4JV60
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the HIRA complex made of UBN1, UBN2, ASF1A, CABIN1 and HIRA.
messages: Expressed at low levels in seedlings.
messages: May be required for replication-independent chromatin assembly.
messages: No visible phenotype (PubMed:25086063, PubMed:25600486). The double mutant hira-1 cabin1-2 has aborted and fewer viable seeds (PubMed:25600486).
messages: Nucleus

3702:AT1G53920
gene id: 3702:AT1G53920
uniprot id: A0A178WKF5
uniprot id: Q9SSA7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G31930
gene id: 3702:AT1G31930
uniprot id: Q9C516
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the G-alpha family. XLG subfamily.
messages: By bacterial pathogen P.syringae.
messages: Dark-grown xlg1-1 xlg2-1 xlg3-1 triple mutant plants showed markedly increased primary root length compared with wild-type plants. Dark-grown roots of the xlg triple mutants also showed altered sensitivity to sugars, abscisic acid (ABA) hyposensitivity and ethylene hypersensitivity, whereas seed germination in xlg triple mutants was hypersensitive to osmotic stress and ABA (PubMed:17999646).
messages: Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems (By similarity). Binds GTP with specificity. Plays a role in the root morphogenesis by regulation of the cell proliferation. Acts with GB1 in the positive regulation of root waving and root skewing.
messages: No visible phenotype. Severely compromised root waving and abnormal root skewing response. Hypersensitivity to ethylene (ACC).
messages: Nucleus
messages: The helical domain (460-611) is required for self-activation.
messages: Ubiquitous. Strongly expressed in vascular tissues, root and shoot meristems and lateral root primordia.

3702:AT5G01520
gene id: 3702:AT5G01520
uniprot id: A0A178U9T4
uniprot id: Q9M022
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in germinating seeds, flower organs and siliques.
messages: Induced by salt stress, cold stress, drought stress and abscisic acid (ABA).
messages: Interacts with ATP1/SDIRIP1.
messages: No visible phenotype under normal growth conditions, but mutant seeds are insensitive to germination inhibition by abscisic acid (ABA).
messages: Plants over-expressing AIRP2 exhibit tolerance to severe drought stress.
messages: Possesses E3 ubiquitin-protein ligase activity in vitro when associated with the E2 enzyme UBC8 in vitro (PubMed:21969385, PubMed:28626006). Plays combinatory roles with AIRP1 in the positive regulation of the abscisic acid-mediated drought stress response (PubMed:21969385). Plays a positive role in abscisic acid- and high salinity-regulated seed germination through the ubiquitin-proteasome-dependent down-regulation of ATP1/SDIRIP1 (PubMed:28626006).
messages: The RING-type zinc finger domain is required for E3 ligase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT1G62680
gene id: 3702:AT1G62680
uniprot id: Q3ECK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G63050
gene id: 3702:AT1G63050
uniprot id: A0A178WEX3
uniprot id: Q9CAN8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the membrane-bound acyltransferase family.
messages: Endoplasmic reticulum membrane
messages: Expressed in rosette leaves, pollen grains, developing embryos and developing seeds.
messages: Interacts with GPAT9 and DGAT1.
messages: Lysophospholipid acyltransferase with broad specificity (PubMed:18154737). Mediates the conversion of lysophosphatidylethanolamine (1-acyl-sn-glycero-3-phosphoethanolamine or LPE) into phosphatidylethanolamine (1,2-diacyl-sn-glycero-3-phosphoethanolamine or PE) (LPEAT activity) (PubMed:18154737). Catalyzes the acylation of lysophosphatidylserine (1-acyl-2-hydroxy-sn-glycero-3-phospho-L-serine or LPS) into phosphatidylserine (1,2-diacyl-sn-glycero-3-phospho-L-serine or PS) (LPSAT activity) (PubMed:18154737). Can convert lysophosphatidylcholine (1-acyl-sn-glycero-3-phosphocholine or LPC) into phosphatidylcholine (1,2-diacyl-sn-glycero-3-phosphocholine or PC) (LPCAT activity) (PubMed:18154737, PubMed:24189065, PubMed:25268378). Exhibits preference for C18-unsaturated acyl-CoA when transferring an acyl group to lysophosphatidylcholine (PubMed:24189065, PubMed:25268378). Can also utilize lysophosphatidylglycerol (LPG) as substrate in vitro (PubMed:18154737). Has neither activity towards lysophosphatidic acid (LPA) nor lysophosphatidylinositol (LPI) (PubMed:18154737). Lysophospholipid acyltransferases catalyze the reacylation step of the phospholipid remodeling pathway also known as the Lands cycle (PubMed:18154737). The primary function of the Lands cycle is to provide a route for acyl remodeling to modify fatty acid (FA) composition of phospholipids derived from the Kennedy pathway (PubMed:23150634, PubMed:22932756). Is involved in PC acyl editing and phosphocholine headgroup exchange between PC and diacylglycerols. This processes control the majority of acyl fluxes through PC to provide polyunsaturated fatty acids for triacylglycerols synthesis in seeds (PubMed:22932756, PubMed:24189065). Involved with LPCAT1 in the direct incorporation of newly synthesized fatty acids exported form the chloroplast into PC through acyl editing (PubMed:31511316).
messages: Membrane
messages: No visible phenotype under normal growth conditions, but the double mutants lpcat1 and lpcat2-2 show increased contents of very-long-chain fatty acids and decreased polyunsaturated fatty acids in seed triacylglycerols.

3702:AT3G26830
gene id: 3702:AT3G26830
uniprot id: A0A654FB33
uniprot id: Q9LW27
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: By salicylic acid, flagellin, oligogalacturonides, silver nitrate, UV-C and infection with A.alternata and various strains of P.syringae. Activated by the transcription factor WRKY33 upon infection with P.syringae.
messages: Membrane
messages: Multifunctional enzyme involved in the biosynthesis of the indole-derived phytoalexin camalexin. Catalyzes two reactions, the formation of dihydrocamalexate from indole-3-acetonitrile-cysteine conjugate and the oxidative decarboxylation of dihydrocamalexate which is the final step in camalexin biosynthesis. Required for the resistance to the fungal pathogens A.brassicicola, B.cinerea, B.elliptica, B.tulipae, L.maculans and Colletotrichum higginsianum. Seems not to be required for resistance to P.syringae, P.porri, and not involved in age-related resistance.
messages: No visible phenotype under normal growth conditions, but deficient in the phytoalexin camalexin accumulation upon bacterial infection and markedly increased susceptibility to infection by the necrotrophic fungus Alternaria brassicicola.

3702:AT1G79540
gene id: 3702:AT1G79540
uniprot id: Q9SAJ5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G27330
gene id: 3702:AT1G27330
uniprot id: A0A178W6C3
uniprot id: Q84K46
names: Similarity
messages: Belongs to the RAMP4 family.

3702:AT1G08140
gene id: 3702:AT1G08140
uniprot id: Q8GX92
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane
messages: Preferentially expressed in pollen.

3702:AT5G10990
gene id: 3702:AT5G10990
uniprot id: A0A178UED2
uniprot id: Q9LEU2
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G50210
gene id: 3702:AT5G50210
uniprot id: Q9FGS4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the quinolinate synthase family. Type 1 subfamily.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. Can complement nadA-deficient E.coli mutant. Essential for the de novo synthesis of NAD. Participates also in cysteine desulfurization mediated by NFS2. Can activate the cysteine desulfurase activity of NFS2 in vitro.
messages: Embryonic lethality when homozygous.
messages: Expressed in roots, leaves, stems and flowers.
messages: Homodimer (PubMed:17452319). Interacts in vitro with NFS2, CpNIFS3 and AO (PubMed:18978034). Part of a Cys defulfurase complex (Probable).
messages: The highly oxygen-sensitive (4Fe-4S) cluster at its NadA domain, can be reconstituted by its own SufE domain in the presence of NFS2, cysteine and ferrous iron.
messages: chloroplast

3702:AT3G26520
gene id: 3702:AT3G26520
uniprot id: A0A384LB08
uniprot id: C0SVC9
uniprot id: Q41963
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
messages: By NaCl and abscisic acid (ABA) treatments.
messages: Duplication of 20 AA in position 80.
messages: Interacts with cucumber mosaic virus (CMV) Protein 1a.
messages: Membrane
messages: Starts to be expressed in seedlings from 2 days ays after germination.
messages: Vacuole membrane
messages: Water channel required to facilitate the transport of water across cell membrane. May be involved in the osmoregulation in plants under high osmotic stress such as under a high salt condition. Transports urea in yeast cells in a pH-independent manner. Transports H(2)O(2) in yeast cells.
messages: Widely expressed. Predominantly expressed in roots.

3702:AT3G09710
gene id: 3702:AT3G09710
uniprot id: Q9SF32
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+)(e.g. CaM1 and CaM2) and CaM-like (e.g. CML8 and CML9) proteins (PubMed:15960618, PubMed:23204523). Interacts with KLCR1 (PubMed:23204523).
messages: By mechanical stimuli and aphid infestation, but not by jasmonate, salicylic acid, 1-aminocyclopropane-1-carboxylate (ACC) ou auxin (IAA).
messages: Expressed in roots, flowers, stems, siliques, inflorescence stems and whole shoots. Restricted to the vascular bundles.
messages: IQD1 overexpression leads to increased resistance against herbivory by generalist chewing and phloem-feeding insects.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (PubMed:15960618, PubMed:23204523). Recruits KLCR1 and calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (PubMed:23204523).
messages: Nucleus
messages: cytoskeleton
messages: nucleolus

3702:AT1G57990
gene id: 3702:AT1G57990
uniprot id: A0A178WC51
uniprot id: Q9C508
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT2G19440
gene id: 3702:AT2G19440
uniprot id: Q9ZUP5
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT1G24510
gene id: 3702:AT1G24510
uniprot id: A0A178WF65
uniprot id: A0A1P8ARS7
uniprot id: O04450
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TCP-1 chaperonin family.
messages: Cytoplasm
messages: Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter.
messages: Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.

3702:AT1G65080
gene id: 3702:AT1G65080
uniprot id: Q8L718
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OXA1/ALB3/YidC (TC 2.A.9.2) family.
messages: Probably required for the insertion of integral membrane proteins into the chloroplast thylakoid membranes.
messages: chloroplast thylakoid membrane

3702:AT1G08570
gene id: 3702:AT1G08570
uniprot id: O64654
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family.
messages: The active site contains a CGGC motif wich differs from the conserved CGPC motif.
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. Possesses insulin disulfide bonds reducing activity.
messages: chloroplast

3702:AT3G02760
gene id: 3702:AT3G02760
uniprot id: A0A654F3J1
uniprot id: F4IYF8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: cytosol

3702:AT4G20310
gene id: 3702:AT4G20310
uniprot id: A0A0F6SCX9
uniprot id: A0A1P8B655
uniprot id: A0A1P8B657
uniprot id: A0A1P8B660
uniprot id: A0A384L4B3
uniprot id: F4JUU5
uniprot id: F4JUU6
uniprot id: F4JUU7
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase M50A family.
messages: Expressed in the vasculature of roots, cotyledons and leaves.
messages: Golgi apparatus membrane
messages: Metalloprotease that catalyzes the second step (site-2 cleavage) in the proteolytic activation of various factors, after site-1 cleavage. Part of a regulated intramembrane proteolysis (RIP) cascade. After ER stress, cleaves BZIP17 and BZIP28 proteins which functions as stress sensors and transducers in ER stress signaling pathway. The N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as proteins involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth.
messages: Short root and increased root branching. Mutant plants have increased sensitivity to salt-induced osmotic stress and tunicamycin.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G15920
gene id: 3702:AT5G15920
uniprot id: Q9LFS8
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SMC family. SMC5 subfamily.
messages: Chromosome
messages: Core component of the SMC5-SMC6 complex that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
messages: Expressed in seedlings, rosette leaves and floral buds.
messages: Forms a heterodimer with SMC6A or SMC6B. The SMC5-SMC6 complex is composed of the SMC5 and SMC6 heterodimer attached via their hinge domain and from the non-SMC subunit NSE4A or NSE4B (By similarity).
messages: Lethal when homozygous.
messages: Nucleus
messages: The flexible hinge domain, which separates the large intramolecular coiled coil regions, allows the heterotypic interaction with the corresponding domain of SMC6, forming a V-shaped heterodimer.

3702:AT3G13898
gene id: 3702:AT3G13898
uniprot id: A0A654F6Y4
uniprot id: C4B8C4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Controls stomatal patterning.
messages: Secreted

3702:AT5G51120
gene id: 3702:AT5G51120
uniprot id: Q93VI4
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Involved in the 3'-end formation of mRNA precursors (pre-mRNA) by the addition of a poly(A) tail of 200-250 nt to the upstream cleavage product. Stimulates poly(A) polymerase (PAPOLA) conferring processivity on the poly(A) tail elongation reaction and controls also the poly(A) tail length. Increases the affinity of poly(A) polymerase for RNA. Binds to poly(A) and to poly(G) with high affinity. May protect the poly(A) tail from degradation.
messages: Monomer and homooligomer (PubMed:18479511). Binds RNA as a monomer and oligomerizes when bound to poly(A) (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits FIPS5, PABN3 and PAPS4 (PubMed:16282318, PubMed:18479511). Interacts with CSP3 (PubMed:23334891).
messages: Nucleus speckle
messages: The RRM domain is essential for the recognition of specific adenine bases in the poly(A) tail, but not sufficient for poly(A) binding.

3702:AT3G22220
gene id: 3702:AT3G22220
uniprot id: A0A384LBN2
uniprot id: Q9LIE1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G27720
gene id: 3702:AT1G27720
uniprot id: A0A1P8AM38
uniprot id: A0A1P8AM40
uniprot id: A0A1P8AM41
uniprot id: A0A1P8AM45
uniprot id: A0A1P8AM49
uniprot id: A0A1P8AM58
uniprot id: Q6SJR1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAF4 family.
messages: Component of the TFIID complex. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa. Interacts with TAF5, TAF10, TAF12, TAF12B, TAF15 and TAF15B.
messages: Expressed in roots, leaves and inflorescences.
messages: Nucleus
messages: TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription.

3702:AT4G10670
gene id: 3702:AT4G10670
uniprot id: F4JME7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M24 family. SPT16 subfamily.
messages: Chromosome
messages: Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.
messages: Component of the FACT complex.
messages: Nucleus

3702:AT3G45030
gene id: 3702:AT3G45030
uniprot id: A0A178V9U8
uniprot id: P49200
names: Similarity
messages: Belongs to the universal ribosomal protein uS10 family.

3702:AT3G60180
gene id: 3702:AT3G60180
uniprot id: A0A5S9XP69
uniprot id: Q8VY84
names: Caution
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
messages: Binds 1 Mg(2+) ion per monomer.
messages: Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors.
messages: Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.
messages: Nucleus

3702:AT3G12930
gene id: 3702:AT3G12930
uniprot id: Q9LDY9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Iojap/RsfS family.
messages: Interacts with chloroplast ribosomal protein L14 (rpl14).
messages: May be a ribosome silencing factor (Potential). Involved in plastid biogenesis (By similarity).
messages: chloroplast

3702:AT3G13530
gene id: 3702:AT3G13530
uniprot id: Q9LJD8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed during embryo development.
messages: Expressed in both the sporophytic and the gametophytic tissues, especially in dividing cells. Mostly present in flower buds and mature flowers. Accumulates also in embryos, in roots apices, trichomes and ovule integuments.
messages: Expression is cell cycle-regulated, with higher expression in G2-M phases.
messages: Interacts with SGP1.
messages: Pollen lethality in plants lacking both MAP3KE1 and MAP3KE2, associated with plasma membrane irregularities following pollen mitosis I (PubMed:16965555). Smaller plants with shorter roots due to reduced cell elongation in roots and reduced cell expansion in rosette leaves, as well as embryos arrest in the early stages of development (PubMed:23087695).
messages: Serine/threonine-protein kinase involved in the spatial and temporal control system organizing cortical activities in mitotic and postmitotic cells (PubMed:11489177, PubMed:15292395). Required for the normal functioning of the plasma membrane in developing pollen (PubMed:16965555). Involved in the regulation of cell expansion, cell elongation, and embryo development (PubMed:23087695).
messages: microtubule organizing center
messages: nucleolus

3702:AT3G54200
gene id: 3702:AT3G54200
uniprot id: A0A384LNY6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G64920
gene id: 3702:AT1G64920
uniprot id: Q9XIQ4
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT4G38092
gene id: 3702:AT4G38092
uniprot id: A0A1P8B8E8
uniprot id: B3H6P6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exportin family.
messages: Nucleus

3702:AT5G37830
gene id: 3702:AT5G37830
uniprot id: Q9FIZ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oxoprolinase family.
messages: Catalyzes the cleavage of 5-oxo-L-proline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. Acts in the glutathione degradation pathway.
messages: Cytoplasm
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: No morphological phenotype, but high accumulation of 5-oxoproline and decreased concentration of glutamate.

3702:AT4G35850
gene id: 3702:AT4G35850
uniprot id: Q8VYR5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT4G00540
gene id: 3702:AT4G00540
uniprot id: Q9SPN3
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Aberrant circadian rhythms.
messages: Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells.
messages: Nucleus
messages: Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Required for proper circadian rhythm (PubMed:18426557).

3702:AT3G45810
gene id: 3702:AT3G45810
uniprot id: Q9LZU9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RBOH (TC 5.B.1.3) family.
messages: Calcium-dependent NADPH oxidase that generates superoxide.
messages: Membrane
messages: Monomer and homodimer.

3702:AT3G03770
gene id: 3702:AT3G03770
uniprot id: Q8LFN2
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT2G42790
gene id: 3702:AT2G42790
uniprot id: A0A654F2K6
uniprot id: Q0WUX6
uniprot id: Q9SJH7
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the citrate synthase family.
messages: Citrate synthase is found in nearly all cells capable of oxidative metabolism.
messages: Expressed throughout seedling growth.
messages: Peroxisomal citrate synthase required for the fatty acid respiration in seedlings, citrate being exported from peroxisomes into mitochondria during respiration of triacylglycerol (TAG). Indeed, complete respiration requires the transfer of carbon in the form of citrate from the peroxisome to the mitochondria.
messages: Peroxisome
messages: Widely expressed. Expressed throughout the shoot. Expressed in flower, silique, stem, cauline leaf, young leaf, mature leaf and senescent leaf.

3702:AT5G11570
gene id: 3702:AT5G11570
uniprot id: A0A654G0M6
uniprot id: Q9LYD5
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in roots.
messages: Membrane

3702:AT5G49570
gene id: 3702:AT5G49570
uniprot id: A5PHD1
uniprot id: Q9FGY9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transglutaminase-like superfamily. PNGase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Specifically deglycosylates the denatured form of N-linked glycoproteins in the cytoplasm and assists their proteasome-mediated degradation. Cleaves the beta-aspartyl-glucosamine (GlcNAc) of the glycan and the amide side chain of Asn, converting Asn to Asp. Prefers proteins containing high-mannose over those bearing complex type oligosaccharides. Can recognize misfolded proteins in the endoplasmic reticulum that are exported to the cytosol to be destroyed and deglycosylate them, while it has no activity toward native proteins. Deglycosylation is a prerequisite for subsequent proteasome-mediated degradation of some, but not all, misfolded glycoproteins (By similarity).

3702:AT4G31610
gene id: 3702:AT4G31610
uniprot id: Q84J39
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in the shoot apical meristem (SAM), in the inflorescence apex and flowers.
messages: May play a role in flower development.
messages: Not expressed in stage 1 flower. In stage 2 and 3 flowers, expressed in the central area of the floral dome, but not in the sepal anlagen. In stage 5 flower, restricted to the carpel anlagen. Stage 6, 7 and 8 flowers, expressed in the medial ridge. In stage 9 flower, expressed in the septum, style, and stigma. Shortly before anthesis expressed in the stigma and septum.
messages: Nucleus

3702:AT1G67490
gene id: 3702:AT1G67490
uniprot id: F4HTM3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 63 family.
messages: Cleaves the distal alpha 1,2-linked glucose residue from the Glc(3)Man(9)GlcNAc(2) oligosaccharide precursor. Required for the accumulation of seed storage proteins, the formation of protein bodies, cell differentiation, cellulose biosynthesis and organization (in cell walls), cell shape determination and organization (e.g. epidermal cells), and embryo development. Involved in root development.
messages: Constitutively expressed in roots, stems, leaves, flowers and siliques.
messages: Embryonic lethal. Impaired glucosidase activity leading to a strongly reduced cellulose content. Abnormal shrunken seeds with embryos arrested at the heart stage. Low levels of storage proteins in seeds accompanied by a loss of protein bodies, abnormal cell enlargement and occasional cell wall disruptions.
messages: Endoplasmic reticulum membrane

3702:AT5G17320
gene id: 3702:AT5G17320
uniprot id: A0A654G1Z4
uniprot id: Q9FFI0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Expressed in anthers with highest levels in the tapetum and pollen grains, and chalazal end of the embryo sac.
messages: Nucleus
messages: Probable transcription factor that binds to the DNA sequence 5'-GCATTAAATGCGCA-3'.

3702:AT3G01180
gene id: 3702:AT3G01180
uniprot id: A0A654F319
uniprot id: Q9MAC8
uniprot id: W8QNS2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Expressed in roots, leaves and flowers.
messages: Involved in the synthesis of glycan chains within amylopectin in leaves. Is required to produce chains with a degree of polymerization of 12 to 25 (DP12-DP25).
messages: Reduced plant growth under short day photopheriod conditions and starch granules with alterated morphology.
messages: amyloplast
messages: chloroplast

3702:AT5G16420
gene id: 3702:AT5G16420
uniprot id: Q9FFE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G30330
gene id: 3702:AT1G30330
uniprot id: A0A654EE38
uniprot id: Q9ZTX8
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional activator. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Regulates both stamen and gynoecium maturation. Promotes jasmonic acid production. Partially redundant with ARF8.
messages: Belongs to the ARF family.
messages: Expressed in sepals at stages 11, 12 and 13 of flower development. Highly expressed in petals at stages 9-10, decreases at stage 11 and disappears after flower stage 12. In anthers, expressed at stage 11 in the tapetum, disappears early in stage 12 when the tapetum degrades and reappears throughout the anther late in stage 12 to persist at least until stage 13. In stamen filaments, expressed at stages 12 to 13, especially near the apical end of the filament. Expressed throughout the gynoecium at early stages up to stage 12, especially strongly in ovules. Expression in gynoecium decreases late in stage 12, but persists through stage 13, especially near the apical end including the style.
messages: Expressed in the whole plant.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Repressed by miR167.

3702:AT4G16800
gene id: 3702:AT4G16800
uniprot id: F4JML5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Mitochondrion
messages: Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

3702:AT3G19080
gene id: 3702:AT3G19080
uniprot id: A0A384KE98
uniprot id: A0A384KKH9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G04870
gene id: 3702:AT5G04870
uniprot id: Q06850
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Interacts with 14-3-3 proteins.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger. Phosphorylates the Ca(2+)-ATPase ACA2 resulting in the inhibition of its calcium activation.
messages: Peroxisome membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (414-444) inactivates kinase activity under calcium-free conditions.

3702:AT3G55490
gene id: 3702:AT3G55490
uniprot id: A0A384LKD0
uniprot id: Q6NNH6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GINS3/PSF3 family.
messages: Nucleus

3702:AT1G23210
gene id: 3702:AT1G23210
uniprot id: A0A654ECI4
uniprot id: O49296
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.
messages: Secreted

3702:AT1G73810
gene id: 3702:AT1G73810
uniprot id: Q9C9T1
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G61880
gene id: 3702:AT3G61880
uniprot id: A0A178V6J4
uniprot id: F4IX02
uniprot id: Q9SLP1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Expressed in the funiculus of developing ovules.
messages: Membrane
messages: Plays role in seed and fruit development. Functions probably in association with CYP78A6 in the regulation of seed growth.
messages: Slight reduction in seed size.
messages: The gain of function mutant 28-5 (T-DNA tagging) in apetala2-1 (ap2-1) mutant background show enlarged and wide pistils and siliques.

3702:AT3G05390
gene id: 3702:AT3G05390
uniprot id: A0A7G2EME4
uniprot id: Q9MA52
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Membrane

3702:AT1G16030
gene id: 3702:AT1G16030
uniprot id: A0A178W9N7
uniprot id: Q9S9N1
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.
messages: By heat shock. Up-regulated by virus infection.
messages: Cytoplasm
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions.

3702:AT1G28010
gene id: 3702:AT1G28010
uniprot id: Q9C7F2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT4G13340
gene id: 3702:AT4G13340
uniprot id: Q9T0K5
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, stems, leaves and flowers, mostly in vascular tissues.
messages: Hydroxylated on proline residues in the S-P-P-P-P repeat.
messages: Interacts with SH3P1.
messages: Modulates cell morphogenesis by regulating cell wall formation and assembly, and/or growth polarization.
messages: O-glycosylated on hydroxyprolines.
messages: cell wall

3702:AT3G13882
gene id: 3702:AT3G13882
uniprot id: A0A384KKE1
uniprot id: F4JEK7
uniprot id: Q84R26
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

3702:AT4G36780
gene id: 3702:AT4G36780
uniprot id: Q94A43
names: PTM
names: Similarity
messages: Belongs to the BZR/LAT61 family.
messages: Phosphorylated. Phosphorylation increases protein degradation.

3702:AT5G24130
gene id: 3702:AT5G24130
uniprot id: A0A178UCZ8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G16730
gene id: 3702:AT2G16730
uniprot id: A0A178VXE0
uniprot id: Q9SCU9
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous, with higher expression levels in roots, flowers and siliques.
messages: apoplast

3702:AT1G27530
gene id: 3702:AT1G27530
uniprot id: A0A5S9W382
uniprot id: Q9SXC8
names: Function
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family. UFC1 subfamily.
messages: E1-like enzyme which specifically catalyzes the second step in ufmylation. Ufmylation is involved in reticulophagy (also called ER-phagy) induced in response to endoplasmic reticulum stress.
messages: E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.

3702:AT1G62880
gene id: 3702:AT1G62880
uniprot id: A0A178W9P6
uniprot id: Q8GWT5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornichon family.
messages: Membrane

3702:AT4G37330
gene id: 3702:AT4G37330
uniprot id: A0A654FWD7
uniprot id: O23155
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G31820
gene id: 3702:AT4G31820
uniprot id: A0A1P8B383
uniprot id: Q8H1D3
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NPH3 family.
messages: Detected in globular-stage embryos in the epidermis with the highest concentration at the apical region. At early heart stage, expression is restricted to the two cotyledon primordia and the meristem. In the late heart to torpedo stages, expression is restricted to the meristem and the cotyledon tips. In mature embryos, stricly expressed at the apical meristem. During seedling development, highly expressed in young leaf primordia and the apical meristems. Detected in the protodermal cell layer of the embryo and the meristem L1 layer at the site of organ initiation. After transition to the reproductive phase, detected in the inflorescence meristem and at various stages of floral development.
messages: Expressed mainly in the apical regions of embryos including cotyledon tips and the apical meristem. Highly expressed in primary root tips.
messages: Late endosome
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Coregulates with PID the auxin-mediated plant organogenesis. Regulates cotyledon development through control of PIN1 polarity. May play an essential role in root gravitropic responses.
messages: Seedlings with abnormal cotyledons.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT5G56110
gene id: 3702:AT5G56110
uniprot id: Q9XHV0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: During anther development, expressed from stage 4 to stage 6 in microsporocytes and tapetal cells. At the tetrad stage, expressed predominantly in tapetal cells. During microgametogenesis, expression decreases radically in the tapetum and microspores.
messages: Expressed in the tapetum and middle layer of developing anthers (PubMed:10353220). Expressed in trichomes (PubMed:12848824).
messages: Male sterility due to distorted pollen grains lacking reticulate exine on their surface.
messages: Nucleus
messages: Plants silencing MYB80 have the majority of pollen grains distorted in shape with reduced or no cytoplasmic content, display early tapetal degeneration with large opaque bodies in the tapetal cytoplasm, and trichomes on cauline and rosette leaves contain increased nuclear DNA content and produces additional branches.
messages: Transcription factor that binds to the DNA sequence 5'-CCAACC-3'. Regulates directly PME5, UND and GLOX1 (PubMed:21673079). Essential for tapetum development in anthers and microsporogenesis (PubMed:12848824, PubMed:21673079). Regulates the timing of tapetal programmed cell death (PCD) which is critical for pollen development. May act through the activation of UND, encoding an A1 aspartic protease (PubMed:21673079). Required for anther development by regulating tapetum development, callose dissolution and exine formation. Acts upstream of A6 and FAR2/MS2, two genes required for pollen exine formation (PubMed:17727613). Negatively regulates trichome endoreduplication and trichome branching (PubMed:12848824).

3702:AT3G28857
gene id: 3702:AT3G28857
uniprot id: A0A178V8X2
uniprot id: Q9LJX1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. May have a regulatory role in various aspects of gibberellin-dependent growth and development.
messages: Belongs to the bHLH protein family.
messages: Interacts with IBH1.
messages: Nucleus
messages: Plants over-expressing PRE5 show long hypocotyls, pale green and slightly narrow leaves, elongated petioles and early flowering. They are not sensitive to the gibberellin inhibitor paclobutrazol during seed germination (PubMed:16527868).

3702:AT1G80150
gene id: 3702:AT1G80150
uniprot id: Q8GW57
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G10710
gene id: 3702:AT5G10710
uniprot id: A0A7G2FDR2
uniprot id: F4KI95
uniprot id: F4KI97
uniprot id: Q8GUP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CENP-O/MCM21 family.
messages: Nucleus

3702:AT5G13240
gene id: 3702:AT5G13240
uniprot id: A0A1P8BBF5
uniprot id: A0A1P8BBF6
uniprot id: A0A5S9Y5X9
uniprot id: A0A7G2FDC3
uniprot id: Q8RXT1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MAF1 family.
messages: Nucleus

3702:AT2G46050
gene id: 3702:AT2G46050
uniprot id: O82363
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT4G34620
gene id: 3702:AT4G34620
uniprot id: A0A178UZA3
uniprot id: O65686
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the bacterial ribosomal protein bS16 family.
messages: Embryo lethal, arresting development at the transition from the globular to the heart stage of embryonic development.
messages: Expressed in leaves, stems and flowers, and, to a lower extent, in roots.
messages: chloroplast

3702:AT1G47510
gene id: 3702:AT1G47510
uniprot id: A0A1P8AUV8
uniprot id: A0A1P8AUX2
uniprot id: F4HT96
uniprot id: Q5EAF2
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Alterations in germination and in dark-growth seedlings. Elevated level of Ins(1,4,5)P3 and InsP2 levels.
messages: Belongs to the inositol polyphosphate 5-phosphatase family.
messages: Cell membrane
messages: Expressed ubiquitously.
messages: Has phosphatase activity toward PtdIns(4,5)P2, and in vitro toward PtdIns(3,5)P2 and PtdIns(3,4,5)P3. Cannot dephosphorylate PtdIns(5)P, Ins(1,4,5)P3 and Ins(1,3,4,5)P4.
messages: Induced by abscisic acid (ABA), jasmonic acid (JA) and auxin (PubMed:15181205). Up-regulated in seedlings and down-regulated in mature plant by salt stress (PubMed:21677096).
messages: It is uncertain whether Met-1 or Met-4 is the initiator.

3702:AT5G02440
gene id: 3702:AT5G02440
uniprot id: A0A178UKG6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G06050
gene id: 3702:AT3G06050
uniprot id: A0A178VBA5
uniprot id: A0A1I9LRF4
uniprot id: Q9M7T0
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxiredoxin family. Prx5 subfamily.
messages: By oxidative stress.
messages: Expressed in the whole plant.
messages: Mitochondrion matrix
messages: Monomer.
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this 1-Cys peroxiredoxin, no C(R) is present and C(P) instead forms a disulfide with a cysteine from another protein or with a small thiol molecule. C(P) can be reactivated by glutathione or the mitochondrial glutaredoxin (Grx) or thioredoxin (Trx) systems.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Reduces preferentially hydrogen peroxide rather than alkyl peroxides. May be involved in mitochondrial redox homeostasis.

3702:AT5G40940
gene id: 3702:AT5G40940
uniprot id: Q9FGW0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT1G61560
gene id: 3702:AT1G61560
uniprot id: A0A1P8AUH2
uniprot id: A0A1P8AUI9
uniprot id: A0A1P8AUK5
uniprot id: F4HVC3
uniprot id: F4HVC5
uniprot id: Q94KB7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT3G21500
gene id: 3702:AT3G21500
uniprot id: A0A1I9LTC7
uniprot id: F4IXL7
uniprot id: F4IXL8
names: Similarity
names: Subunit
messages: Belongs to the transketolase family. DXPS subfamily.
messages: Homodimer.

3702:AT2G33130
gene id: 3702:AT2G33130
uniprot id: A0A178VSL2
uniprot id: O49320
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Proteolytically cleaved, probably by S1P, a subtilisin-like serine protease (subtilase).
messages: Secreted

3702:AT1G68980
gene id: 3702:AT1G68980
uniprot id: Q9CAA5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G11890
gene id: 3702:AT1G11890
uniprot id: A0A178WBU4
uniprot id: Q94AU2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the synaptobrevin family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: In flowers, mostly present in developing and mature male gametophytes and in the endosperm.
messages: In sec22-1 and sec22-2, impaired gametophytes development (PubMed:21205036). Morphological disruption of the endoplasmic reticulum (ER) as well as Golgi fragmentation and consumption in pollen grains (PubMed:21205036). Abnormal pollen development during the bicellular stage, eventually giving rise to degenerated pollen grains (PubMed:21205036). Altered embryogenesis in embryo sacs leading to unfused polar nuclei in their central cell (PubMed:21205036). Repressed cesium Cs(+) uptake and accumulation (PubMed:23817436).
messages: Interacts with SEC24A.
messages: Mainly expressed in flowers and siliques, to a lower extent in seedlings, and barely in roots and leaves.
messages: Membrane
messages: V-SNARE involved in vesicle trafficking from the ER to the Golgi complex and required for early secretion (PubMed:21205036). Involved in endoplasmic reticulum (ER) biogenesis and functions as well as for Golgi-stack integrity (PubMed:21205036). Essential for gametophytes development (PubMed:21205036). Involved in cesium Cs(+) accumulation, a non-essential cation (PubMed:23817436).

3702:AT1G27740
gene id: 3702:AT1G27740
uniprot id: A0A384L1Z0
uniprot id: Q8LEG1
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: D-box [RxxLxxxN] motif functions as a recognition motif for the ubiquitination machinery.
messages: Expressed constitutively in roots, leaves, and flowers (PubMed:12679534). Expressed in root epidermal hair cells (PubMed:20139979).
messages: Homodimer.
messages: Induced by jasmonate (JA) treatment (PubMed:31988260). Induced by low phosphate conditions (PubMed:27251390, PubMed:29651114).
messages: Nucleus
messages: Strong reduction in root hair number, density and length in seedlings.
messages: Transcription factor involved in the regulation of root hair elongation (PubMed:20139979, PubMed:27251390, PubMed:27452638). Is sufficient to promote postmitotic cell growth in root-hair cells and is a direct transcriptional target of RHD6 and RSL1 (PubMed:20139979). Involved in the regulation of root hair elongation in response to low phosphate (PubMed:27251390, PubMed:29651114). Controls root hair cell growth by regulating the expression of genes encoding proteins involved in cell signaling, cell wall modification and secretion (PubMed:27452638).
messages: Ubiquitinated (Probable). Ubiquitination leads to its subsequent degradation by the 26S proteasome (PubMed:27251390).

3702:AT3G18450
gene id: 3702:AT3G18450
uniprot id: Q9LS45
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in heavy metals transport.
messages: Membrane

3702:AT3G56990
gene id: 3702:AT3G56990
uniprot id: A0A1I9LSC8
uniprot id: Q9M1J9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat NOL10/ENP2 family.
messages: nucleolus

3702:AT2G46880
gene id: 3702:AT2G46880
uniprot id: Q84LR6
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted
messages: Specifically expressed in flowers.

3702:AT1G52870
gene id: 3702:AT1G52870
uniprot id: A0A654EHY4
uniprot id: Q8LF31
uniprot id: Q9C933
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3702:AT3G17390
gene id: 3702:AT3G17390
uniprot id: A0A178VIP8
uniprot id: Q9LUT2
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate (By similarity).
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate (By similarity). Can utilize magnesium, manganese or cobalt (in vitro) (By similarity).
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.
messages: Cytoplasm
messages: Detected in trichomes (at the protein level).
messages: Homotetramer.
messages: Induced by cold.

3702:AT2G21110
gene id: 3702:AT2G21110
uniprot id: Q9SKQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT2G31910
gene id: 3702:AT2G31910
uniprot id: Q9SKA9
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: Cell membrane
messages: Mutants display a reduced rosette width, a later flowering time and an altered leaf K(+) and Na(+) contents (PubMed:16513816). No defect in male fertility, due to redundancy with CHX23. Chx21 and chx23 double mutants are male sterile (PubMed:21239645).
messages: Operates as a Na(+)/H(+) antiporter that plays a role in regulation of xylem Na(+) concentration and, consequently, Na(+) accumulation in the leaf. Required for pollen tube guidance, but not for normal pollen development. May also be involved in the development or function of the female gametophyte.
messages: Specifically expressed in root endodermal cells (PubMed:16513816). Expressed in seedlings, roots, leaves, flowers, flower buds and pollen.
messages: The article by Evans et al was retracted by the editors due to concerns over image manipulation, which raised sufficient doubts regarding the credibility of the study.

3702:AT1G03070
gene id: 3702:AT1G03070
uniprot id: A0A654E6N2
uniprot id: Q9SA63
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

3702:AT4G36600
gene id: 3702:AT4G36600
uniprot id: A0A1P8B7I6
uniprot id: F4JQF1
names: Similarity
messages: Belongs to the LEA type 4 family.

3702:AT5G03160
gene id: 3702:AT5G03160
uniprot id: Q9LYW9
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By tunicamycin.
messages: Endoplasmic reticulum lumen
messages: Expressed in flower buds and flowers.
messages: Interacts with the helicase domain of the tobamovirus (TMV) and the tobacco etch virus (TEV) replicases.
messages: No visible phenotype under normal growth conditions, but the mutant plants die rapidly after challenges with the turnip mosaic virus (TuMV) and turnip vein clearing virus (TVCV). The double mutant erdj3b and p58ipk is male gametophytic lethal.
messages: Plays an important positive role in viral symptom development and is required for viral multiplication and pathogenesis.

3702:AT1G61280
gene id: 3702:AT1G61280
uniprot id: O64792
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PIGP family.
messages: Membrane
messages: Part of the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.

3702:AT5G61730
gene id: 3702:AT5G61730
uniprot id: Q9FLT5
names: Biotechnology
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Endoplasmic reticulum membrane
messages: Expressed during the middle and late stages of seed development.
messages: Highly expressed in siliques. Detected in seedlings, rosette leaves, stems and flowers.
messages: Mediates the transport of acyl-CoAs and/or free fatty acids to the endoplasmic reticulum. Has no effect on the selectivity of fatty acid incorporation into triacylglycerol or further desaturation steps.
messages: Overexpression of ABCA9 increases seed oil content.
messages: Reduced seed size with abnormal morphology and reduced triacylglycerol content. Retarded growth on medium lacking sucrose.

3702:AT5G21060
gene id: 3702:AT5G21060
uniprot id: A0A178U956
uniprot id: A0A178UB93
uniprot id: F4K6Y8
uniprot id: F4K6Y9
uniprot id: Q84JZ4
names: Caution
names: Similarity
messages: Belongs to the homoserine dehydrogenase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G66980
gene id: 3702:AT5G66980
uniprot id: Q9FGD2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G54385
gene id: 3702:AT1G54385
uniprot id: Q5XVI1
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts with SUN1 and SUN2. Binds to F-actin.
messages: No visible phenotype. Affected nucleus positioning in guard cells.
messages: Nucleus membrane
messages: Plays a role in nucleus positioning in guard cells.
messages: Preferentially expressed in guards cells, but also detected in root cells.
messages: The KASH domain, which contains a transmembrane domain, mediates the nuclear envelope targeting and is involved in the binding to the SUN proteins.

3702:AT1G71300
gene id: 3702:AT1G71300
uniprot id: Q9FVV6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the VPS52 family.
messages: Component of the Golgi-associated retrograde protein (GARP) complex.
messages: Detected in pollen.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: May be involved in retrograde transport of early and late endosomes to the late Golgi.
messages: trans-Golgi network membrane

3702:AT4G38400
gene id: 3702:AT4G38400
uniprot id: A0A178V2B6
uniprot id: Q9SVE5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family.
messages: Belongs to the expansin family. Expansin-like A subfamily.
messages: Secreted

3702:AT1G19910
gene id: 3702:AT1G19910
uniprot id: A0A1P8AQP0
uniprot id: A0A384KIA7
uniprot id: P59228
uniprot id: Q24JM2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the V-ATPase proteolipid subunit family.
messages: Expressed in leaf, root, flower and silique, with lower expression in roots.
messages: Membrane
messages: Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e). The proteolipid components c and c'' are present as a hexameric ring that forms the proton-conducting pore.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.
messages: Vacuole membrane

3702:AT4G30700
gene id: 3702:AT4G30700
uniprot id: A0A178UUW3
uniprot id: Q9SUH6
names: Caution
names: Sequence Caution
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G08180
gene id: 3702:AT4G08180
uniprot id: A0A7G2F1A0
uniprot id: A0A7G2F1X7
uniprot id: F4JFW6
uniprot id: Q8L751
names: Function
names: Sequence Caution
names: Similarity
names: Tissue Specificity
messages: Belongs to the OSBP family.
messages: Expressed in roots, leaves, stems, flowers and pollen.
messages: May be involved in the transport of sterols.
messages: Sequencing errors.

3702:AT1G48670
gene id: 3702:AT1G48670
uniprot id: A0A1P8APW1
uniprot id: Q9C736
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.

3702:AT2G04025
gene id: 3702:AT2G04025
uniprot id: Q6ID76
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Golven' means irregular waves in Dutch.
messages: Belongs to the RGF family.
messages: Binds to LRR receptor-like serine/threonine-protein kinases RGI1, RGI2 and RGI3 to trigger their dimerization with SERK proteins and subsequent signaling.
messages: Expressed in root tips (PubMed:20798316, PubMed:22307643, PubMed:23370719). Also present in siliques (PubMed:22307643).
messages: In roots, expressed only in the quiescent center (QC), the columella stem cells (CC) and the innermost layer of central columella cells; mostly present in the third and fourth CC layers, but not, or only marginally, in the QC (PubMed:20798316, PubMed:22307643, PubMed:23370719). Induced during lateral root formation (PubMed:23370719). Accumulates in pollen grains (PubMed:23370719).
messages: No visible phenotype, due to the redundancy with other RGF genes. Triple mutant rgf1-rgf2-rgf3 shows a decreased meristematic cell number resulting in a short root phenotype.
messages: Secreted
messages: Signaling peptide (root growth factor) that maintains the postembryonic root stem cell niche (PubMed:20798316, PubMed:23370719). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (By similarity).

3702:AT1G17350
gene id: 3702:AT1G17350
uniprot id: A0A178WGH6
uniprot id: F4I7I6
uniprot id: Q9LQI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CIA30 family.
messages: Chaperone protein involved in the assembly of the mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
messages: Mitochondrion

3702:AT2G39720
gene id: 3702:AT2G39720
uniprot id: A0A178W067
uniprot id: O22283
names: Caution
names: Function
messages: Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G43190
gene id: 3702:AT1G43190
uniprot id: Q6ICX4
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Plays a role in pre-mRNA splicing. Binds to the polypyrimidine tract of introns. May promote the binding of U2 snRNP to pre-mRNA (By similarity).

3702:AT2G47830
gene id: 3702:AT2G47830
uniprot id: A0A178VPX5
uniprot id: A0A384LQL2
uniprot id: Q8L725
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
messages: Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
messages: May be due to a competing donor splice site.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuole membrane

3702:AT5G05440
gene id: 3702:AT5G05440
uniprot id: A0A5S9Y1M7
uniprot id: Q9FLB1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Membrane
messages: Monomer (PubMed:21658606). Homodimer. Binds ABA on one subunit only. Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Binds both (-)-ABA and (+)-ABA (PubMed:23844015). Interacts with HAB1, ABI1 and ABI2, and possibly with other PP2Cs (PubMed:19624469, PubMed:19874541, PubMed:19898420).
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) in an ABA-independent manner but more efficiently when activated by ABA. Confers enhanced sensitivity to ABA (PubMed:19407143, PubMed:19624469, PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT5G49850
gene id: 3702:AT5G49850
uniprot id: Q9LTA8
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT5G09800
gene id: 3702:AT5G09800
uniprot id: Q9LXE3
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G53935
gene id: 3702:AT1G53935
uniprot id: F4HTF3
names: Similarity
messages: Belongs to the GeBP family.

3702:AT2G33820
gene id: 3702:AT2G33820
uniprot id: A0A178VWG0
uniprot id: A0A1P8B093
uniprot id: A0A1P8B094
uniprot id: A0A1P8B0A2
uniprot id: Q84UC7
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: High expression in flowers and siliques. Lower expression in leaves and stems.
messages: Inhibited by mercuric chloride.
messages: Membrane
messages: Mitochondrial arginine transporter that catalyzes the counter-exchange of arginine with lysine, ornithine, arginine and histidine. Substrate preference in reconstituted proteoliposomes is arginine > lysine > ornithine > histidine. May be involved in the delivery of arginine, released from seed reserves, to mitochondrial arginase and the export of ornithine.
messages: Mitochondrion inner membrane

3702:AT3G54960
gene id: 3702:AT3G54960
uniprot id: A0A178VF09
uniprot id: Q8VX13
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.
messages: Belongs to the protein disulfide isomerase family.
messages: By chemically-induced ER stress response.
messages: Endoplasmic reticulum lumen
messages: Widely expressed.

3702:AT1G61800
gene id: 3702:AT1G61800
uniprot id: A0A1P8AN56
uniprot id: Q94B38
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPT transporter family. GPT (TC 2.A.7.9) subfamily.
messages: Expressed in seeds, flowers, stamens, and rosette leaves, with highest levels found in sepals and senescing leaves.
messages: Glucose 6-phosphate (Glc6P) transporter (PubMed:15722468). Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate (PubMed:15722468). Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP) (PubMed:15722468, PubMed:20712627). Required for dynamic acclimation of photosynthesis and partitioning of Glc6P between the chloroplast and the cytosol (PubMed:19939944, PubMed:25474495). May modulate the sensing of sugar status during early seedling development (PubMed:24489010).
messages: Induced when grown in high light conditions (PubMed:19939944, PubMed:31316533). Highly expressed in response to Pseudomonas syringae treatment (PubMed:15722468).
messages: Membrane
messages: No visible phenotype under normal growth conditions (PubMed:15722468). Slight delay in seedling establishement, specifically in the process of cotyledon greening (PubMed:24489010).
messages: chloroplast membrane

3702:AT2G19930
gene id: 3702:AT2G19930
uniprot id: A0A1P8B2V4
uniprot id: A0A1P8B2V9
uniprot id: A0A5S9WZL6
uniprot id: O82188
names: Function
names: Similarity
messages: Belongs to the RdRP family.
messages: Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).

3702:AT1G51650
gene id: 3702:AT1G51650
uniprot id: A0A178W6M8
uniprot id: Q96253
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic ATPase epsilon family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and of the central stalk which is part of the complex rotary element. Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT3G60840
gene id: 3702:AT3G60840
uniprot id: Q9LZY0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MAP65/ASE1 family.
messages: Cell cycle-regulated expression with higher levels during mitosis.
messages: Cytoplasm
messages: Forms a dimer (By similarity). Binds to microtubules (MT). Bundles polymerized MT via the formation of 25-nm crossbridges with centrally located endocytic MT.
messages: Microtubule-associated protein involved in mitotic spindle formation.
messages: Nucleus
messages: spindle pole

3702:AT5G19510
gene id: 3702:AT5G19510
uniprot id: A0A5S9Y678
uniprot id: Q9SCX3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the EF-1-beta/EF-1-delta family.
messages: EF-1 is composed of 4 subunits: alpha, beta (1B-alpha=beta'), delta (1B-beta), and gamma (1B-gamma).
messages: EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP.

3702:AT5G28040
gene id: 3702:AT5G28040
uniprot id: F4K5T4
names: Similarity
messages: Belongs to the GeBP family.

3702:AT5G55500
gene id: 3702:AT5G55500
uniprot id: Q9LDH0
names: Function
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
messages: Glycosylation at least at one of the two sites Asn-51 and Asn-301 is necessary for enzyme stability and activity.
messages: Glycosyltransferase involved in the xylosylation of N-glycans (PubMed:10781814, PubMed:12943552, PubMed:15013764, PubMed:15686448). Possesses beta-1,2-xylosyltransferase activity, transferring xylose from UDP-xylose to the core beta-linked mannose of N-glycans (PubMed:10781814, PubMed:12943552, PubMed:15013764, PubMed:15686448). Involved in the biosynthesis of glycoprotein bound N-glycans (PubMed:15686448, PubMed:22024534). Does not require metal ions for its activity (PubMed:15686448).
messages: Golgi apparatus membrane
messages: Renders plant glycoproteins immunogenic and allergenic in human. This is due to the presence of beta-1,2-xylose and/or core alpha-1,3-fucose which are not found in mammalian proteins, and which constitute epitopes for carbohydrate-reactive antibodies.

3702:AT1G49430
gene id: 3702:AT1G49430
uniprot id: A0A178W3L9
uniprot id: Q9XIA9
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Acts in the cutin pathway. Preferentially uses palmitate, palmitoleate, oleate and linoleate. Required for repression of lateral root formation through its role in cutin biosynthesis and subsequent aerial tissues permeability.
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.
messages: Dwarf phenotype with smaller, wrinkled leaves and overall reduced vigor. Higher water loss rate and susceptibility to drought stress. Defective in the cuticular membrane. Strong resistance to virulent Botrytis cinerea and enhanced susceptibility to avirulent Pseudomonas syringae.
messages: Endoplasmic reticulum
messages: Expressed along the entire length of the stem, but expression was not entirely epidermal specific, with some expression found in internal cell layers as well. Was expressed in leave epidermal cells, flowers (sepals, petals, stamens, filaments and carpel), siliques and developing seeds. In roots, expression was detected in an internal cell layer, probably the endodermal layer.
messages: Positively regulated by WIN1.

3702:AT3G24590
gene id: 3702:AT3G24590
uniprot id: Q8H0W1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family.
messages: Involved in the maturation of the plastid protein translocation channel. Required for the biogenesis of plastid internal membranes. May also function as a thylakoidal processing peptidase.
messages: Plants are albino and seedling lethal.
messages: chloroplast envelope
messages: chloroplast thylakoid membrane

3702:AT4G18100
gene id: 3702:AT4G18100
uniprot id: A0A178V453
uniprot id: P49211
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL32 family.

3702:AT4G08260
gene id: 3702:AT4G08260
uniprot id: Q9SUF4
names: Caution
names: Similarity
messages: Although related to the protein phosphatase 2C family, lacks some of the conserved residues that bind manganese, suggesting it has no phosphatase activity.
messages: Belongs to the PP2C family.
messages: Could be the product of a pseudogene.

3702:AT3G08980
gene id: 3702:AT3G08980
uniprot id: A0A1I9LP74
uniprot id: A0A384KAI1
uniprot id: Q9S724
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family. IMP2 subfamily.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT3G17100
gene id: 3702:AT3G17100
uniprot id: A0A384L6T7
uniprot id: B9DGH0
uniprot id: Q9LSN7
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Atypical bHLH transcription factor probably unable to bind DNA. Negatively regulates brassinosteroid signaling.
messages: Homodimer (Probable). Interacts with PRE3.
messages: Nucleus

3702:AT5G05810
gene id: 3702:AT5G05810
uniprot id: Q5EAE9
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:ArthCp066
gene id: 3702:ArthCp066
uniprot id: A0A1B1W513
uniprot id: P56786
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf2 family.
messages: Probable ATPase of unknown function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.
messages: chloroplast stroma

3702:AT4G09590
gene id: 3702:AT4G09590
uniprot id: Q9SST3
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G20340
gene id: 3702:AT5G20340
uniprot id: O49353
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: May play a role in plant defense against pathogens.
messages: Secreted

3702:AT5G44400
gene id: 3702:AT5G44400
uniprot id: A0A5S9YB41
uniprot id: Q9FKU8
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT4G20900
gene id: 3702:AT4G20900
uniprot id: A0A178V3U6
uniprot id: Q9SUC3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MS5 protein family.
messages: Essential for male fertility, especially for microspore and pollen grain production (PubMed:9750346, Ref.2). Involved in the regulation of cell division after male meiosis I and II to facilitate exit from meiosis and transition to G1 (PubMed:9451956, PubMed:21119056).
messages: Expressed at low levels mostly in floral organs during meiosis. Also barely detectable in leaves, stems and roots.
messages: Nucleus
messages: Specifically localized within meiotic cells in the anther locules, transiently, only during late meiosis.
messages: Sterile plants with abnormal formation of polyads during microsporogenesis, tetrads with more than four pools of chromosomes, after male meiosis, due to an unusual and abnormal cell division without further DNA or chromosome replication after meiosis I and II, and leading to collapsed pollen in flattened anthers (PubMed:9750346, Ref.2). Chromatin recondensation and stretching after meiosis II characterized by a dense microtubule network connecting haploid nuclei in the tetrad stage rearranged into four bipolar spindles as chromatids recondense, as if haploid nuclei entered a third meiotic division (PubMed:9451956, PubMed:21119056).

3702:AT5G59613
gene id: 3702:AT5G59613
uniprot id: P0DO44
uniprot id: P0DO45
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase 6 subunit family.
messages: Induced by several abiotic stresses such as salt, mannitol, drought and cold (PubMed:18338219). Under oxidative stress caused by H(2)O(2), transient induction followed by strongly reduced levels (PubMed:18338219). Induced by sucrose (PubMed:15829605).
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain (Probable). F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk (Probable). During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (Probable). Part of the complex F(0) domain (Probable). Confers tolerance to several abiotic stresses (e.g. salt, mannitol, drought, oxidative and cold stresses), probably by providing additional energy needed for cell homeostasis (PubMed:18338219, PubMed:23096681).
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain (Probable). F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk (Probable). During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (Probable). Part of the complex F(0) domain (Probable). Confers tolerance to several abiotic stresses (e.g. salt, mannitol, drought, oxidative and cold stresses), probably by providing additional energy needed for cell homeostasis (PubMed:23096681).
messages: Mitochondrion inner membrane

3702:AT1G16090
gene id: 3702:AT1G16090
uniprot id: F4I2T5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT2G37130
gene id: 3702:AT2G37130
uniprot id: A0A5S9X4V2
uniprot id: F4IQ05
uniprot id: Q42580
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Late induced after mechanical wounding. Enhanced expression following incompatible bacterial pathogen attack. Expressed under a diurnal rhythm (circadian clock control).
messages: Might function as heat shock-like defense protein. May be implicated in the systemic acquired resistance response.
messages: Preferentially expressed in roots and leaves, slightly in stems.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated during leaf development.

3702:AT5G57670
gene id: 3702:AT5G57670
uniprot id: Q5XF57
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT4G35260
gene id: 3702:AT4G35260
uniprot id: A0A178UVS2
uniprot id: Q8LFC0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Heterooligomer of catalytic and regulatory subunits.
messages: Mitochondrion
messages: Performs an essential role in the oxidative function of the citric acid cycle.
messages: Ubiquitous. Predominantly expressed in roots, stems and leaves.

3702:AT1G06030
gene id: 3702:AT1G06030
uniprot id: A0A654E8G1
uniprot id: Q9LNE3
names: Function
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.
messages: May play an important role in maintaining the flux of carbon towards starch formation.

3702:AT1G33880
gene id: 3702:AT1G33880
uniprot id: Q9C8U5
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. IAN subfamily.
messages: Mostly expressed in pollen. Also detected in lateral roots and radicles.
messages: Up-regulated by brassinolides. Down-regulated by 2-aminoethoxyvinylglycine (AVG), high CO(2), isoxaben, and propiconazole treatments.

3702:AT1G27600
gene id: 3702:AT1G27600
uniprot id: A0A384KPX8
uniprot id: Q9SXC4
uniprot id: W8PW09
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 43 family.
messages: Expressed in developing interfascicular fibers and xylem cells in stems and developing secondary xylem in roots.
messages: Golgi apparatus membrane
messages: Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.
messages: Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.
messages: Membrane

3702:AT3G20950
gene id: 3702:AT3G20950
uniprot id: Q9LIG8
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G09460
gene id: 3702:AT5G09460
uniprot id: Q9FY69
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT1G11920
gene id: 3702:AT1G11920
uniprot id: A0A5S9TZK9
uniprot id: O65388
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT2G18750
gene id: 3702:AT2G18750
uniprot id: A0A178VP49
uniprot id: C0SV51
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant ACBP60 protein family.
messages: Expressed in stems, flowers and root.
messages: Interacts with calmodulin (CaM).
messages: Nucleus
messages: Transcription activator that binds DNA in a sequence-specific manner, likely 5'-GAAATTTTGG-3', to promote the expression of target genes.

3702:AT2G27600
gene id: 3702:AT2G27600
uniprot id: A0A178VQU8
uniprot id: Q9ZNT0
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by LIP5 and PROS.
messages: Belongs to the AAA ATPase family.
messages: By Pseudomonas syringae pv. tomato strain DC3000 (PstDC3000).
messages: Cytoplasm
messages: Involved in the transport of biosynthetic membrane proteins from the prevacuolar/endosomal compartment to the vacuole. Required for multivesicular body (MVB) protein sorting. Catalyzes the ATP-dependent dissociation of class E VPS proteins from endosomal membranes, such as the disassembly of the ESCRT-III complex (PubMed:17468262, PubMed:20663085, PubMed:21810997, PubMed:22258747, PubMed:24812106). May also regulate cell cycle (PubMed:20663085). Required during seed development for the formation of mucilage in seed coat and testa (PubMed:20930567). Involved in the maintenance of Na(+)/K(+) homeostasis under salt stress (PubMed:23580756). Required for cell expansion (PubMed:24385429).
messages: Membrane
messages: Monomer or homodimer (in nucleotide-free form). Decamer, dodecamer or tetradecamer of two stacked respective homooligomeric rings (when bound to ATP); the dodecameric form seems to be predominant (By similarity). Interacts with members of the ESCRT-III subcomplex such as LIP5, VPS60-1, VPS2.1, VPS20.1, VPS20.2, VPS24-1, VPS32.1, VPS32.2, CHMP1A and VPS24 (PubMed:17468262, PubMed:19304934, PubMed:20663085, PubMed:24812106, PubMed:25010425). Binds to PROS/At4g24370 (PubMed:24385429).
messages: Mostly expressed in leaves, to a lower extent in seeds, and barely in roots and flowers (at protein level) (PubMed:17468262). Particularly expressed in trichomes (PubMed:20663085).
messages: Normal vacuolar development in early stages of trichome development shortly followed by fragmentation of the large central vacuole which finally disappears completely, associated with the formation of abnormally enlarged late endosomes. Abnormal sorting of vacuolar proteins that are instead secreted. Trichomes contain frequently multiple nuclei (PubMed:20663085). Reduced ESCRT-III disassembly (PubMed:21810997). Blocked vacuolar trafficking (PubMed:22258747). Imbalanced Na(+)/K(+) ratio under salt stress (PubMed:23580756).
messages: Nucleus
messages: Prevacuolar compartment membrane
messages: The MIT domain serves as an adapter for ESCRT-III proteins. It forms an asymmetric three-helix bundle that binds amphipathic MIM (MIT interacting motif) helices along the groove between MIT helices 2 and 3 present in a subset of ESCRT-III proteins thus establishing the canonical MIM-MIT interaction. In an extended conformation along the groove between helices 1 and 3, also binds to a type-2 MIT interacting motif (MIM2).
messages: multivesicular body membrane

3702:AT1G10330
gene id: 3702:AT1G10330
uniprot id: A0A178WMY9
uniprot id: Q9SY75
names: Caution
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G19890
gene id: 3702:AT5G19890
uniprot id: Q39034
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: Slightly expressed in roots.
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT1G03880
gene id: 3702:AT1G03880
uniprot id: A0A178W5K4
uniprot id: P15456
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in seeds 8 days after anthesis.
messages: Belongs to the 11S seed storage protein (globulins) family.
messages: Detected in siliques at nucleotide level from 6 days post anthesis (dpa) to 17 dpa. First observed in siliques at protein level 12 dpa and accumulates progressively as native isoforms or proteolytic fragments during the last week of seed maturation/desiccation. Present in dry seeds, but disappears during their germination (at protein level).
messages: Hexamer; each subunit is composed of an acidic and a basic chain derived from a single precursor and linked by a disulfide bond.
messages: Phosphorylated in seeds on some Tyr residues in response to abscisic acid (ABA).
messages: Protein storage vacuole
messages: Proteolytically processed during seed maturation at a conserved Asn-Gly peptide bond by an asparaginyl endopeptidase to produce two mature polypeptides referred to as alpha and beta subunits that are joined together by a disulfide bond.
messages: Seed storage protein.
messages: Ubiquitinated.

3702:AT4G40040
gene id: 3702:AT4G40040
uniprot id: A0A384KRT1
uniprot id: B9DGR9
uniprot id: P59169
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Can be acetylated to form H3K9ac, H3K14ac, H3K18ac and H3K23ac. H3K9ac could compete with H3K9me and prevent gene silencing. H3K9acK14ac molecules are 30-fold less abundant than H3K9ac or H3K14ac. Very low level of H3K9meK14ac. H3K14 is specifically acetylated by HAG1 and deacetylated by HDA6. H3K9ac is deacetylated by HDT1. H3K9ac is restricted to euchromatin. H3K18ac, but not H3K9ac, is cell-cycle dependent and linked to replication. Reduced H4R3me2s increases H3K14ac in the FLC chromatin and activates or maintains its transcription. Vernalization decreases H3K9/14ac in the promoter region of FLC.
messages: Chromosome
messages: Expressed in a replication-independent manner. Strong expression in the generative cell of early bicellular pollen, but not detected in late bicellular and tricellular pollen.
messages: In meta- and anaphase, H3T11ph is found on the entire length of the condensed chromosomes, whereas H3S10ph and H3S28ph are confined to the pericentromeric regions. During the first meiotic division, H3S10ph and H3S28ph are found on the entire length of the chromosome. Both sites may be involved in sister chromatid cohesion. No phosphorylation detected during interphase. AUR1 and AUR2 phosphorylate only H3S10, while AUR3 phosphorylates both H3S10 and H3S28.
messages: Mono-, di- or trimethylated to form mainly H3K4me1/2/3, H3K9me1/2/3 and H3K36me1/2/3. Very low monomethylation at H3K18me1 or H3K23me1. H3K4me1/2/3, H3K9me3, H3K27me3 and H3K36me1/2/3 are typical marks for euchromatin, whereas heterochromatic chromocenters are enriched in H3K9me1/2 and H3K27me1/2. H3K27me3 is largely restricted to the transcribed regions of single genes and not associated with low-nucleosome density regions. SUVR1 to SUVR5, ASHH1 to ASHH3 and ASHR1 to ASHR3 methylate H3, with ASHH2 methylating specifically H3K4 and H3K36. Monomethylation at H3K27me1 by ATXR5/6 is inhibited by the presence of Thr-32. The Su(var)3-9 homolog proteins (SUVH1 to SUVH10) are H3K9-specific methyltransferases. Among them, KRYPTONITE (SUVH4) is only involved in di- or trimethylation. Regarding H3K9, the major forms are H3K9me1 (20%) and H3K9me2 (10%), while H3K9me3 is rare (0.2%). H3K9me is controlled by DNA methylation and is not required for the formation of constitutive heterochromatin, but double methylation H3K9meK27me is required for the recruitment of CMT3 to methylate heterochromatin and silence euchromatic loci. Very low level of H3K9meK14ac. 36% of H3K27 is found under the form of H3K27me1 and 6% of H3K27me2, with no detectable H3K27me3. 6% of H3K36 is found under the form of H3K36me1, 15% of H3K36me2 and 3% of H3K36me3. H3K27me2K36me1 is found in 15% of the proteins while H3k27me1K36me2 is not detected. H2BK143ub1 is probably prerequisite for H3K4me. Elevated H3K4me3 and H3K36me2 formed by ASHH2 are required for high FLC expression. Vernalization increases H3K9me2 and H3K27me2/3 and decreases H3K4me2 at the FLC locus, resulting in the epigenetic silencing of this floral repressor.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. The H3K9meK27me dimethylated N-terminal tail of histone H3 can directly interact with the chromodomains of CMT3 and/or LHP1. Interacts with AHL27. Binds to HIRA (PubMed:25086063).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4me1/2/3 = mono-, di- and trimethylated Lys-5; H3K9me1/2/3 = mono-, di- and trimethylated Lys-10; H3K9ac = acetylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14ac = acetylated Lys-15; H3K18ac = acetylated Lys-19; H3K18me1 = monomethylated Lys-19; H3K23ac = acetylated Lys-24; H3K23me1 = monomethylated Lys-24; H3K27me1/2/3 = mono-, di- and trimethylated Lys-28; H3S28ph = phosphorylated Ser-29; H3K36me1/2/3 = mono-, di- and trimethylated Lys-37.
messages: Ubiquitous.
messages: Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: nucleolus

3702:AT4G12080
gene id: 3702:AT4G12080
uniprot id: A0A178V7H8
uniprot id: Q8VYJ2
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Chromosome
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). May play a function in the positioning of chromatin fibers within the nucleus.
messages: nucleoplasm

3702:AT3G20440
gene id: 3702:AT3G20440
uniprot id: D2WL32
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
messages: Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Essential during embryogenesis.
messages: Embryolethal. Embryo developmental arrests at the heart stage associated with reduced cell divisions and abnormal cell differentiation, thereby leading to defects in setting up the shoot apical meristem, embryonic vascular tissues and cotyledons. Modified starch composition. This phenotype is enhanced when associated with SBE2.1 and SBE2.2 disruptions.
messages: Monomer.
messages: Mostly expressed in flowers and inflorescence, and, to a lower extent, in seedlings, roots, stems, leaves, siliques and seeds.
messages: amyloplast
messages: chloroplast stroma

3702:AT4G13750
gene id: 3702:AT4G13750
uniprot id: F4JTS8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Embryo-defective phenotype characterized by size reduction and frequent fusion of cotyledons.
messages: Essential protein required for cell fate determination during embryogenesis (PubMed:15266054). Mediates auxin-dependent coordinated cell-fate specification and patterning in embryos (e.g. cotyledon outgrowth and separation), shoots and roots (e.g. leaf vascular development, cellular patterning and stem cell maintenance in the meristems) (PubMed:19880797, PubMed:20729639). Required for provascular PIN1 expression and region-specific expression of PIN7 in leaf primordia, cell type-specific expression of PIN3, PIN4, and PIN7 in the root, and PIN2 polarity in the root cortex (PubMed:19880797, PubMed:20729639).
messages: In shoots, expressed in developing leaf primordia and, weakly, in the shoot apical meristem (SAM). First observed throughout young leaf primordia, but, as leaf primordia develop, restricted to the adaxial side of primordia and then toward the basal side. In seeds, present in developing embryos and later in provascular cells of cotyledons at the early stage of vascular differentiation. In roots, accumulates in the root apical meristem (RAM) with weak expression in the quiescent center and columella initials but not in mature root tissues; also expressed during primordial development of lateral roots.
messages: Nucleus
messages: Specifically expressed in developing embryos, leaf primordia, and shoot and root apical meristems.

3702:AT1G76540
gene id: 3702:AT1G76540
uniprot id: A0A178WJF2
uniprot id: Q8LF80
names: Developmental Stage
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Expressed from early G2 phase and increases to reach a peak at mitosis.
messages: Expressed in root tips, shoot apical meristem, leaf primordia vascular tissues and tapetum of anthers.
messages: Interacts with CYCD4-1 and CKS1.
messages: Protein abundance may be regulated through proteasome-mediated protein degradation.

3702:AT3G25810
gene id: 3702:AT3G25810
uniprot id: Q9LRZ6
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsb subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Expressed exclusively in mature flowers, but not in inmmature buds.
messages: Involved in monoterpene (C10) biosynthesis. The major products are alpha- and beta-pinene, sabinene, beta-myrcene, (E)-beta-ocimene and limonene.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).
messages: chloroplast

3702:AT4G18620
gene id: 3702:AT4G18620
uniprot id: A0A178V4P0
uniprot id: Q9SN51
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Forms heterodimer with PYL10, thus antagonizing PP2Cs-binding and ABA-independent inhibition of PP2Cs (PubMed:24165892). Homodimer. Binds ABA on one subunit only. Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Interacts with PP2Cs such as PP2CA, ABI1, HAB1 and HAB2 (PubMed:24165892).
messages: Membrane
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition (By similarity). Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs), selectively PP2CA, in an ABA-independent manner (PubMed:24165892).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT2G38080
gene id: 3702:AT2G38080
uniprot id: A0A178VQR2
uniprot id: O80434
names: Cofactor
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Lignin degradation and detoxification of lignin-derived products (By similarity). Required for secondary xylem cell wall lignification.
messages: Lignin degradation and detoxification of lignin-derived products.
messages: Transcript levels diminished during rosette leaves development.
messages: Ubiquitous, with higher levels in the inflorescence stem.
messages: apoplast

3702:AT2G45180
gene id: 3702:AT2G45180
uniprot id: A0A178VQF0
uniprot id: Q42044
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT3G27170
gene id: 3702:AT3G27170
uniprot id: A0A178VKG6
uniprot id: P92942
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the chloride channel (TC 2.A.49) family.
messages: Broadly expressed in the plant.
messages: Homodimer (By similarity). Interacts with PP2A5 (PubMed:27676158).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Voltage-gated chloride channel.

3702:AT4G09530
gene id: 3702:AT4G09530
uniprot id: A0A178V0W3
uniprot id: Q9M0P0
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT1G80710
gene id: 3702:AT1G80710
uniprot id: Q9SAI7
names: Similarity
messages: Belongs to the WD repeat DDB2/WDR76 family.

3702:AT4G15760
gene id: 3702:AT4G15760
uniprot id: F4JK85
uniprot id: O81815
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the 3-hydroxybenzoate 6-hydroxylase family.
messages: Expressed in seedlings, roots, leaves, flowers and siliques.
messages: Induced by A.brassicicola, especially in cv. Di-G during compatible interaction.
messages: Monomer.

3702:AT4G10240
gene id: 3702:AT4G10240
uniprot id: O82617
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor that may be involved in seedling photomorphogenesis.

3702:AT1G20450
gene id: 3702:AT1G20450
uniprot id: F4HST2
uniprot id: P42759
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant dehydrin family.
messages: By dehydration, cold stress and abscisic acid (ABA). Induction by dehydration occurs after 1 hour and increases to a maximum after 10 hours. Cold stress induction peaks at 1 hour and 5 hours after start of cold exposure.
messages: In stems, cauline leaves, roots and flowers. Low levels found in maturing seeds. Absent in dry seeds.

3702:AT3G54260
gene id: 3702:AT3G54260
uniprot id: Q940H3
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT1G73410
gene id: 3702:AT1G73410
uniprot id: A0A384L3K9
uniprot id: Q9FX36
names: Caution
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: In elongating stem internodes, expressed in developing protoxylem and elongating interfascicular fiber cells. In non-elongating internodes, expressed in developing metaxylem cells and interfascicular fibers. In roots, expressed in developing secondary xylem.
messages: Nucleus
messages: Plants silencing MYB54 exhibit secondary cell wall (SCW) defects including severe reduction in SCW thickening in both interfascicular fibers and xylary fibers of inflorescence stems.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor that regulates secondary cell wall (SCW) biosynthesis, especially in interfascicular and xylary fibers.

3702:AT3G47440
gene id: 3702:AT3G47440
uniprot id: A0A654FI99
uniprot id: Q9STX9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
messages: Membrane
messages: Potential aquaporin, which may facilitate the transport of water and small neutral solutes across cell membranes.

3702:AT5G57300
gene id: 3702:AT5G57300
uniprot id: A0A178U865
uniprot id: Q9LVC8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.
messages: Component of a multi-subunit COQ enzyme complex.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Methyltransferase required for the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).
messages: Mitochondrion inner membrane

3702:AT1G56350
gene id: 3702:AT1G56350
uniprot id: A0A178WD49
uniprot id: F4I532
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic/mitochondrial release factor family.
messages: Directs the termination of translation in response to the peptide chain termination codon UGA. Required for the proper translation, stability and normal processing of UGA-containing polycistronic transcripts in chloroplasts.
messages: chloroplast stroma

3702:AT3G54085
gene id: 3702:AT3G54085
uniprot id: A0A654FH24
uniprot id: Q8GRX8
names: Similarity
messages: Belongs to the YOS1 family.

3702:AT3G04690
gene id: 3702:AT3G04690
uniprot id: A0A178VHY9
uniprot id: Q9SR05
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in pollen, but not in pistils or seedlings.
messages: Male paralog of FERONIA, a female factor expressed in synergid cells that controls pollen tube behavior.
messages: Named Anxur after the husband of the Etruscan goddess of fertility Feronia.
messages: No effect on male fertility and pollen germination, but siliques slightly shorter. Anx1 and anx2 double mutants show defects in male gametophytes due to premature pollen tube rupture.
messages: Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G16020
gene id: 3702:AT5G16020
uniprot id: Q9LFS2
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in mature siliques and in pollen, mainly in the sperm cells. Detected in the egg cell within the female gametophyte.
messages: Required for micropylar pollen tube guidance. Plays a role during early embryo patterning.

3702:AT5G13400
gene id: 3702:AT5G13400
uniprot id: Q9LYR6
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in flower and siliques.
messages: Membrane

3702:AT1G75440
gene id: 3702:AT1G75440
uniprot id: A0A178WCH3
uniprot id: Q9FWT2
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT5G39500
gene id: 3702:AT5G39500
uniprot id: A0A654G6L0
uniprot id: Q9FLY5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Acts as the major regulator of retrograde Golgi to endoplasmic reticulum trafficking but is also involved in the endocytosis process. Could function redundantly with GNOM. Regulates vesicle trafficking required for the coordinated polar localization of auxin efflux carriers which in turn determines the direction of auxin flow. Mediates the endocytosis of PIN2 from plasma membrane to endosomal compartments. Required for maintenance of endoplasmic reticulum morphology.
messages: Golgi apparatus membrane
messages: Homodimer.
messages: Membrane
messages: Slightly abnormal Golgi stacks with laterally expanded cisternae. Abnormal formation of spherical bodies in the endoplasmic reticulum.
messages: cytosol

3702:AT3G19130
gene id: 3702:AT3G19130
uniprot id: Q0WW84
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the polyadenylate-binding RBP47 family.
messages: Cytoplasmic granule
messages: Expressed at low levels in leaves, stems, flowers, and seedlings.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
messages: Interacts with the poly(A) tail of mRNA in nucleus.
messages: Nucleus
messages: Repressed by ozone-induced oxidative stress.

3702:AT5G16810
gene id: 3702:AT5G16810
uniprot id: A0A178U9S3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G30880
gene id: 3702:AT4G30880
uniprot id: A0A178UWS5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G20040
gene id: 3702:AT3G20040
uniprot id: A0A178VNP2
uniprot id: Q56XE8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the hexokinase family.
messages: Fructose and glucose phosphorylating enzyme (By similarity). May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol (By similarity).
messages: Mitochondrion outer membrane

3702:AT5G53420
gene id: 3702:AT5G53420
uniprot id: A0A384L2D3
uniprot id: A0A654GAV7
uniprot id: F4KJ52
uniprot id: Q8L602
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G24120
gene id: 3702:AT2G24120
uniprot id: A0A5S9X0T4
uniprot id: F4INQ5
uniprot id: O24600
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phage and mitochondrial RNA polymerase family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Nuclear-encoded DNA-dependent RNA polymerase that catalyzes the transcription of DNA into RNA in chloroplasts using the four ribonucleoside triphosphates as substrates (Probable). Required for chloroplast development and leaf mesophyll cell proliferation (PubMed:16698900).
messages: Reduced plant growth, impaired lateral root formation, rounded and pale-green leaves, protruding leaf laminae, irregular leaf margins and reduced seed sets.
messages: chloroplast

3702:AT3G59750
gene id: 3702:AT3G59750
uniprot id: Q9M1Z9
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.

3702:AT4G24060
gene id: 3702:AT4G24060
uniprot id: A0A384LC04
uniprot id: B9DGH2
uniprot id: Q8LAP8
names: Developmental Stage
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in the stele.
messages: Expressed at preprocambial stages first in wide domains, and later confined to sites of vein development.
messages: May be due to an intron retention.
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

3702:AT5G47080
gene id: 3702:AT5G47080
uniprot id: A0A5S9YCV4
uniprot id: F4KIZ0
uniprot id: F4KIZ2
uniprot id: F4KIZ3
uniprot id: P40228
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the casein kinase 2 subunit beta family.
messages: Heterotetramer of two catalytic alpha subunits and two regulatory beta subunits (PubMed:7696877, PubMed:19509278). Interacts with CCA1 (PubMed:9724822). Interacts with LHY (PubMed:10535927).
messages: Nucleus
messages: Phosphorylated by alpha subunit.
messages: Plays a complex role in regulating the basal catalytic activity of the alpha subunit.
messages: Plays a complex role in regulating the basal catalytic activity of the alpha subunit. The tetrameric holoenzyme CK2, composed of two alpha and two beta subunits, phosphorylates the transcription factor GBFl, resulting in stimulation of its DNA binding activity (PubMed:7696877). CK2 phosphorylates the transcription factor PIF1 after an exposure to light, resulting in a proteasome-dependent degradation of PIF1 and promotion of photomorphogenesis (PubMed:21330376). CK2 phosphorylates translation initiation factors. May participate in the regulation of the initiation of translation (PubMed:19509278, PubMed:19509420). Stimulates the binding of CCA1 to promoters (Probable).
messages: Tetramer of two alpha and two beta subunits.
messages: cytosol

3702:AT2G28210
gene id: 3702:AT2G28210
uniprot id: A0A178VW72
uniprot id: A0A1P8AXK4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.
messages: chloroplast stroma

3702:AT3G08510
gene id: 3702:AT3G08510
uniprot id: A0A384L124
uniprot id: C0Z2P3
uniprot id: F4IX90
uniprot id: Q39033
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Amino acids 23-36 of the EF-hand-like domain are necessary catalysis but not for binding to lipid vesicles.
messages: Cell membrane
messages: Expressed in roots, shoots, leaves and flowers.
messages: Membrane
messages: Not induced by environmental stresses such as dehydration, salinity and low temperature.
messages: Phosphorylation level varies significantly during early response to bacterial elicitor.
messages: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. At physiological calcium concentration, the preferred substrate is phosphatidylinositol 4,5-bisphosphate versus phosphatidylinositol.

3702:AT5G47030
gene id: 3702:AT5G47030
uniprot id: A0A178UQE0
uniprot id: Q96252
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase epsilon chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP turnover in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and of the central stalk which is part of the complex rotary element. Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT5G47060
gene id: 3702:AT5G47060
uniprot id: A0A384KPG6
uniprot id: Q9FGQ9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FLZ family.
messages: Cytoplasm
messages: Down-regulated in response to mild as well as prolonged energy depletion (PubMed:26442059). Up-regulated by glucose, sucrose and mannose (PubMed:26442059).
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:24600465, PubMed:29945970). Interacts with KINB1, KINB2 and KINB3 via its N-terminal part (PubMed:29945970). Interacts with DSP3 and BBX21 via its FLZ-type zinc finger domain (PubMed:24901469). Forms heterodimer with FLZ7 and FLZ15 in vitro (PubMed:29945970).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.
messages: Nucleus

3702:AT1G68890
gene id: 3702:AT1G68890
uniprot id: Q15KI9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Consists of a fusion of four bacterial genes, menF, menD, menC and menH belonging to the same operon. In higher plants, the C-terminal chorismate binding domain is absent from the isochorismate synthase (MenF) module, leading to a non-functional module. The isochorismate synthase activity has been taken over by ISC1 and ICS2. In green and red algae lineages, this module has maintained its structural integrity and is functional (PubMed:16617180).
messages: High chlorophyll fluorescence and lack of phylloquinone.
messages: In the 2nd section; belongs to the TPP enzyme family. MenD subfamily.
messages: In the 3rd section; belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily.
messages: In the C-terminal section; belongs to the AB hydrolase superfamily. MenH family.
messages: In the N-terminal section; belongs to the isochorismate synthase family.
messages: Multifunctional enzyme required for phylloquinone (vitamin K1) biosynthesis.
messages: chloroplast membrane

3702:AT1G55230
gene id: 3702:AT1G55230
uniprot id: A0A178WE54
uniprot id: Q9C893
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM45 family.
messages: Membrane

3702:AT1G32550
gene id: 3702:AT1G32550
uniprot id: A0A178WJI4
uniprot id: Q9C7Y4
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (Probable). Mediates alternative electron partitioning in conditions of acceptor limitation at photosystem I (By similarity).
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: Slightly up-regulated in response to acceptor limitation at photosystem I (PSI) in plants lacking of photosynthetic [2Fe-2S] ferredoxin (Fd).
messages: chloroplast

3702:AT5G64420
gene id: 3702:AT5G64420
uniprot id: A0A654GDZ2
uniprot id: Q9FGF4
names: Similarity
messages: Belongs to the MYBBP1A family.

3702:AT5G60230
gene id: 3702:AT5G60230
uniprot id: A0A654GCU5
uniprot id: F4JYW0
uniprot id: Q9LSS3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tRNA-intron endonuclease family.
messages: Constitutes one of the two catalytic subunit of the tRNA-splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural features of the tRNA body. Probably carries the active site for 5'-splice site cleavage (By similarity).
messages: Nucleus
messages: tRNA splicing endonuclease is a heterotetramer composed of SEN2, SEN15, SEN34/LENG5 and SEN54.

3702:AT1G06430
gene id: 3702:AT1G06430
uniprot id: A0A654E791
uniprot id: Q8W585
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: By heat and high light.
messages: Expressed in cotyledons, cauline and rosette leaves, stems, sepals, flovers and siliques. Very low in roots.
messages: Heterohexamers with FTSH1, FTSH2 and FTSH5. May also form homooligomers.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the N-terminal section; belongs to the AAA ATPase family.
messages: No visible changes in phenotype, probably due to a complementation by FTSH2. The presence of both FTSH1 or FTSH5 (subunit type A) and FTSH2 or FTSH8 (subunit type B) is essential for an active complex formation.
messages: Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions.
messages: The conserved lumenal (CL) domain (74-154) is present only in some FtsH homologs from organisms performing oxygenic photosynthesis.
messages: chloroplast thylakoid membrane

3702:AT3G20920
gene id: 3702:AT3G20920
uniprot id: A0A654F964
uniprot id: F4IWB6
uniprot id: Q9LIH2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEC62 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G52060
gene id: 3702:AT5G52060
uniprot id: Q0WUQ1
names: Function
names: Subunit
messages: Binds to the ATPase domain of HSP70/HSC70 chaperones.
messages: Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses.

3702:AT3G54100
gene id: 3702:AT3G54100
uniprot id: A0A654FFM2
uniprot id: Q9M393
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT2G26670
gene id: 3702:AT2G26670
uniprot id: A0A178VP48
uniprot id: O48782
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by ascorbate.
messages: Belongs to the heme oxygenase family.
messages: By salt treatment. Down-regulated by jasmonate.
messages: Key enzyme in the synthesis of the chromophore of the phytochrome family of plant photoreceptors. Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Produces specifically the biliverdin IX-alpha isomer. Can form complex with heme, is ferredoxin-dependent and its activity is increased in the presence of ascorbate. Plays a role in salt acclimation signaling. May affect the plastid-to-nucleus signaling pathway by perturbing tetrapyrrole synthesis. The plastid-to-nucleus signal plays an important role in the coordinated expression of both nuclear- and chloroplast-localized genes that encode photosynthesis-related proteins.
messages: Long hypocotyl, incomplete chloroplast and leaf development, lack of photoreversible phytochromes and lack of phytochromobilin, the phytochrome chromophore. No cotyledon expansion in response to bright-red light. Increased levels of jasmonate (JA) and constitutive expression of JA-inducible defense genes. Increased sensitivity to salt stress and no acclimation response to salinity.
messages: Widely expressed.
messages: chloroplast

3702:AT5G21100
gene id: 3702:AT5G21100
uniprot id: Q8LPL3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Ascorbate oxidase involved in a redox system involving ascorbic acid (AsA) (PubMed:15883131, PubMed:27255930). The oxidation of AsA represses responses to high salinity and oxidative stress conditions such as vegetative growth and seed production reductions (PubMed:15883131). Negative regulator of defense responses toward incompatible Turnip mosaic virus (TuMV strain UK1) by preventing jasmonic acid (JA)- dependent accumulation of ascorbic acid (AsA, AS) and dehydroascobic acid (DHA) (PubMed:27255930).
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Dimer.
messages: Impaired ascorbate oxidase activity and reduced apoplastic hydrogen peroxide H(2)O(2) and ascorbate peroxidase accumulation, especially in high salinity (PubMed:15883131). Short stems and late flowering (PubMed:15883131). Slightly increased ascorbate (AsA) contents in the apoplasm but lower monodehydroascorbate (DHA) contents (PubMed:15883131, PubMed:27255930). Increased tolerance for high salinity during vegetative growth, seed production and seed germination (PubMed:15883131). Higher resistance to oxidative stress agents such as methyl viologen (MV) and hydrogen peroxide H(2)O(2) (PubMed:15883131). Enhanced resistance to Turnip mosaic virus (TuMV) associated with an increased accumulation of ascorbic acid (AsA, AS) and dehydroascobic acid (DHA) due to a reduction of AS oxidation and activation of AS recycling (PubMed:27255930).
messages: Repressed progressively during incompatible Turnip mosaic virus (TuMV) infection (strain UK1) (PubMed:27255930). When the plant is infected by a compatible TuMV strain (UK1 m2), the down-regulation is transient and last two days (PubMed:27255930).
messages: Secreted

3702:AT1G72930
gene id: 3702:AT1G72930
uniprot id: Q9SSN3
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth (By similarity).
messages: In some plant proteins and in human SARM1, the TIR domain has NAD(+) hydrolase (NADase) activity (By similarity). However, despite the presence of the catalytic Asp residue, the isolated TIR domain of human TLR4 lacks NADase activity (By similarity). Based on this, it is unlikely that Toll-like receptors have NADase activity.
messages: Interacts with MED37E.
messages: Mostly present in shoots.

3702:AT3G10410
gene id: 3702:AT3G10410
uniprot id: A0A178VKH6
uniprot id: P32826
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in roots, senescent leaves and flowers.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT5G52920
gene id: 3702:AT5G52920
uniprot id: A0A178U9G2
uniprot id: Q9FLW9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the pyruvate kinase family.
messages: In seeds, accumulates in endosperm and embryo. In torpedo-shaped embryos, restricted to the hypocotyl and in the outer parts of the young cotyledons. In later embryo stages, present in all tissues except root tips.
messages: Mitochondrion
messages: Mostly expressed in seeds, and, to a lower extent, in roots, leaves (veins and trichomes), inflorescences, siliques, pollen (grains and tubes) and flowers (sepals and petals).
messages: Oligomer of alpha and beta subunits.
messages: Reduced plastidial pyruvate kinase activity and altered seed oil content leading to wrinkled seeds, retarded embryo elongation and reduced seed germination.
messages: Required for plastidial pyruvate kinase activity. Involved in seed oil accumulation, embryo development and seed storage compounds mobilization upon germination.
messages: chloroplast stroma

3702:AT1G08170
gene id: 3702:AT1G08170
uniprot id: Q9SGE3
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK6ac.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK6ac = acetylated Lys-7.

3702:AT2G13690
gene id: 3702:AT2G13690
uniprot id: Q9SKH2
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT2G23220
gene id: 3702:AT2G23220
uniprot id: O22185
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G10985
gene id: 3702:AT3G10985
uniprot id: Q94AK6
names: Induction
messages: Accumulates in leaves during senescence (PubMed:9617813, PubMed:16603661). Induced reversibly 4 days after exposure to ozone O(3) (PubMed:10444084, PubMed:16913859). Triggered transiently by Nep1, a fungal protein that causes necrosis (PubMed:12857840). Expressed in nematode-induced giant cells (e.g. M.javanica) at early stages, 3 days after infection (PubMed:20003167).

3702:AT5G53580
gene id: 3702:AT5G53580
uniprot id: Q56Y42
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the aldo/keto reductase family.
messages: Catalyzes the reduction of pyridoxal (PL) with NADPH and oxidation of pyridoxine (PN) with NADP(+). Involved in the PLP salvage pathway.
messages: Expressed in cotyledons, embryos, flowers, shoots, roots and seeds.
messages: Monomer.
messages: Mutants with reduced expression of PLR1 have lower levels of total B6 vitamers but there is no reduction in PN or PNP levels.
messages: chloroplast

3702:AT1G19650
gene id: 3702:AT1G19650
uniprot id: F4HP88
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity).

3702:AT1G09483
gene id: 3702:AT1G09483
uniprot id: F4I0Z6
names: Caution
names: Subcellular Location Annotation
messages: Could be the product of a pseudogene.
messages: Lacks the N-terminal part with coiled coil domains, which are common features of the NEAP family.
messages: Membrane

3702:AT2G47550
gene id: 3702:AT2G47550
uniprot id: A0A178VWW1
uniprot id: O22256
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in flower buds.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT1G80360
gene id: 3702:AT1G80360
uniprot id: A0A178WAK1
uniprot id: Q9C969
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Coordinates and prevents auxin (IAA) and ethylene biosynthesis, thus regulating auxin homeostasis in young seedlings (PubMed:23377040, PubMed:26163189). Shows aminotransferase activity with methionine; can use the ethylene biosynthetic intermediate L-methionine (L-Met) as an amino donor and the auxin biosynthetic intermediate, indole-3-pyruvic acid (3-IPA) as an amino acceptor to produce L-tryptophan (L-Trp) and 2-oxo-4-methylthiobutyric acid (KMBA) (PubMed:23377040). Can also use tryptophan (Trp), phenylalanine (Phe), and tyrosine (Tyr) as substrates. Regulates tryptophan (Trp) homeostasis and catabolism in mature plants. Also possibly involved in the metabolism of other aromatic amino acids and phenylpropanoid homeostasis (PubMed:26163189).
messages: Cytoplasm
messages: Expressed in roots, cotyledons and flowers.
messages: Homodimer.
messages: Suppressor of sav3 mutant plants leading to rescued hypocotyl elongation in response to shade and restored auxin biosynthetic pathway. In continuous white light, elongated hypocotyls and petioles, with increased leaf hyponasty, decreased leaf area, and accelerated leaf senescence as well as early flowering. Increases levels of auxin (IAA), indole-3-pyruvic acid (3-IPA) and the ethylene precursor 1-aminocyclopropane-1-carboxylate (ACC) (PubMed:23377040). Indole-dependent auxin (IAA) overproduction phenotypes including leaf epinasty and adventitious rooting. In contrast to normal plants, uses primarily Trp-independent (Trp-I) IAA synthesis when grown on indole-supplemented medium, but uses primarily Trp-dependent (Trp-D) IAA synthesis when grown on unsupplemented medium. Accumulates strongly IAA and Trp when grown on indole, probably due to loss of Trp catabolism. Altered phenylpropanoid profile (PubMed:26163189).

3702:AT1G32330
gene id: 3702:AT1G32330
uniprot id: A0A1P8AQ04
uniprot id: A0A654EFH3
uniprot id: A0A7G2DY14
uniprot id: Q9LQM7
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class A subfamily.
messages: Cytoplasm
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer (By similarity). Interacts with HSP90-2 (PubMed:17965410).
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT3G19910
gene id: 3702:AT3G19910
uniprot id: A0A178VK20
uniprot id: Q9LT17
names: Caution
names: Function
names: PTM
messages: Auto-ubiquitinated.
messages: E3 ubiquitin-ligase probably involved in organ size regulation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G43510
gene id: 3702:AT5G43510
uniprot id: Q4VP08
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Expressed in the pistil. Detected exclusively in the synergid cells.
messages: Interacts with MDIS1, MIK1, MIK2 and TDR/PXY, but not with MDIS2 (PubMed:26863186). Binds to PRK6 LRRs (PubMed:29109411).
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Pollen tube attractants guiding pollen tubes to the ovular micropyle (PubMed:23271953, PubMed:29109411). Attracts specifically pollen tubes from A.thaliana, but not those from A.lyrata (PubMed:23271953). Triggers endocytosis of MDIS1 in the pollen tube tip (PubMed:26863186).
messages: Secreted

3702:AT1G15540
gene id: 3702:AT1G15540
uniprot id: A0A1P8AVH5
uniprot id: A0A1P8AVH8
uniprot id: A0A384KUB8
uniprot id: Q9M9D9
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT1G70170
gene id: 3702:AT1G70170
uniprot id: A0A178WK53
uniprot id: O04529
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates during aging. Expressed in leaves and roots of young seedlings and in leaves, roots, and inflorescences of mature flowering plants. In leaves, present in the phloem, in developing xylem elements, epidermal cells, and neighboring mesophyll cell layers. In flowers, localized in pistils, ovules, and receptacles.
messages: Belongs to the peptidase M10A family. Matrix metalloproteinases (MMPs) subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cell membrane
messages: Growth inhibition, due to inhibited onset of shoots, reduced growth of roots, leaves and shoots, late flowering, fast degradation of chlorophyll in leaves and early senescence.
messages: Induced in seedling rosette leaves by methyl jasmonate (MeJA) and cadmium (Cd). Induced in seedling roots by salt stress (NaCl). Inhibited in leaves and inflorescences of adult plants by exposure to cadmium.
messages: Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Required for plant growth, morphogenesis, and development with particular relevance for flowering and senescence (PubMed:11726650). Active on McaPLGLDpaAR-NH(2) (QF24) and myelin basic protein (MBP) and, to some extent, on beta-casein (PubMed:24156403).
messages: Mostly expressed in roots, and, to a lower extent, in flowers, leaves and stems.
messages: Repressed by acetohydroxamic acid (AHA).
messages: The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme.

3702:AT3G05240
gene id: 3702:AT3G05240
uniprot id: Q9MA95
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G32770
gene id: 3702:AT1G32770
uniprot id: Q9LPI7
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Nucleus
messages: Stems and roots, specifically in interfascicular fibers (sclerenchyma), cells differentiating into vascular vessels (cambium), and xylem.
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.
messages: Transcriptional activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening and lignification of sclerenchymatous fibers and secondary xylem vessels (tracheary elements). Seems to repress the secondary cell wall thickening of xylary fibers. May also regulate the secondary cell wall lignification of other tissues. Binds to and activates the promoter of MYB46.

3702:AT3G21510
gene id: 3702:AT3G21510
uniprot id: A0A178V856
uniprot id: Q9ZNV9
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt, cold and drought stress.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.
messages: Histidine-containing phosphotransfer domain (HPt) contains an active histidine that mediates the phosphotransfer.
messages: Interacts with the B-type response regulators ARR1, ARR2, ARR4 and ARR9. Binds to ETR1, AHK2, AHK3, AHK4, AHK5 and FBR12.
messages: Nucleus
messages: Strongly expressed in roots.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.
messages: cytosol

3702:AT1G59940
gene id: 3702:AT1G59940
uniprot id: Q9ZWS9
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARR family. Type-A subfamily.
messages: By cytokinin (zeatin) and nitrate.
messages: Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.
messages: Nucleus
messages: Predominantly expressed in roots.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT5G13410
gene id: 3702:AT5G13410
uniprot id: Q9LYR5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: chloroplast thylakoid lumen

3702:AT4G16860
gene id: 3702:AT4G16860
uniprot id: F4JNA9
names: Domain
names: Function
names: Subunit
messages: Interacts with RSH1.
messages: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis isolates Emoy2 and Emwa1 (downy mildew disease) (PubMed:11846877). Plays a role in the regulation of temperature response during plant growth and survival (PubMed:20699401).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT1G06670
gene id: 3702:AT1G06670
uniprot id: F4IDQ6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DExH box helicase family.
messages: Homodimer.
messages: May function as an ATP-dependent RNA/DNA helicase. Binds DNA in vitro in a non-specific manner.
messages: Nucleus
messages: PH (probe helix) motif serves as a DNA recognition helix.

3702:AT4G21585
gene id: 3702:AT4G21585
uniprot id: A0A1P8B3M9
uniprot id: A0A1P8B3N0
uniprot id: A0A1P8B3Q3
uniprot id: A0A654FRG3
uniprot id: F4JJL0
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the nuclease type I family.
messages: Binds 3 divalent metal cations.
messages: Endonuclease that can use single-stranded RNA and DNA as substrates (PubMed:23620482). In contradiction with PubMed:23620482, cannot hydrolyze single-stranded DNA and does not cleave mismatches (PubMed:17651368).
messages: Monomer.

3702:AT1G03430
gene id: 3702:AT1G03430
uniprot id: A0A1P8AWM0
uniprot id: A0A384KWJ1
uniprot id: Q67XQ1
uniprot id: Q8L9T7
names: Domain
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the whole plant.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.
messages: Histidine-containing phosphotransfer domain (HPt) contains an active histidine that mediates the phosphotransfer.
messages: Interacts with the B-type response regulators ARR1 and ARR2. Binds to AHK2, AHK3, AHK4 and AHK5.
messages: Nucleus
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.
messages: cytosol

3702:AT4G32175
gene id: 3702:AT4G32175
uniprot id: A0A654FUU6
uniprot id: Q500X1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRP40 family.
messages: Cytoplasm

3702:AT2G19020
gene id: 3702:AT2G19020
uniprot id: O65919
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Expressed in flowers.
messages: Secreted

3702:AT4G10480
gene id: 3702:AT4G10480
uniprot id: A0A384KL47
uniprot id: A8MQP6
uniprot id: Q0WWN5
uniprot id: Q9SZY1
names: Function
names: Similarity
messages: Belongs to the NAC-alpha family.
messages: May promote appropriate targeting of ribosome-nascent polypeptide complexes.

3702:AT1G16410
gene id: 3702:AT1G16410
uniprot id: Q949U1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By methyl jasmonate.
messages: Catalyzes the conversion of the short chain elongated methionines di-, tri-, and tetrahomomethionine to their respective aldoximes 5-methylthiopentanaldoxime, 6-methylthiohexanaldoxime, and 7-methylheptanaldoxime.
messages: Endoplasmic reticulum membrane
messages: Highly expressed in cotyledons, leaves, stems and siliques. Detected in flowers and lateral roots, but not in the main root. Expressed only in the vascular bundles in apical plant parts.
messages: Plants have a bushy phenotype with crinkled leaves and retarded vascularization.

3702:AT4G36380
gene id: 3702:AT4G36380
uniprot id: A0A178V4B0
uniprot id: Q9M066
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Involved in brassinosteroid (BR) biosynthesis (PubMed:15703058, PubMed:17138693). Converts typhasterol (TY) to cathasterone (CS) and 6-deoxotyphasterol (6-deoxoTY) to 6-deoxocathasterone (6-deoxoCT) (PubMed:15703058). C-23 hydroxylase that converts directly (22S,24R)-22-hydroxy-5-alpha-ergostan-3-one and 3-epi-6-deoxocathasterone to 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo3DHT) and 6-deoxotyphasterol (6-deoxoTY), respectively (PubMed:17138693). These C-23 hydroxylation shortcuts bypass campestanol, 6-deoxocathasterone, and 6-deoxoteasterone (6-deoxoTE) (PubMed:17138693). Catalyzes also the conversion of cathasterone to teasterone (TE), (22S,24R)-22-hydroxyergost-4-en-3-one (22-OH-4-en-3-one) to (22R,23R)-22,23-dihydroxy-campest-4-en-3-one (22,23-diOH-4-en-3-one) and (22S)-22-hydroxycampesterol (22-OHCR) to (22R,23R)-22,23-dihydroxycampesterol (22,23-diOHCR) (PubMed:17138693). Required for the regulation of polar elongation of leaf cells (PubMed:9694802, PubMed:10430960). Required for the longitudinal elongation of floral organs (PubMed:10430960).
messages: Plants with short petioles and round leaves. Altered polar elongation of leaf cells (PubMed:9694802). The double mutant plants cyp90c1 and cyp90d1 exhibit a characteristic brassinosteroid-deficient dwarf phenotype (PubMed:15703058).
messages: Widely expressed.

3702:AT1G15350
gene id: 3702:AT1G15350
uniprot id: A0A178WN02
uniprot id: A0A384LKR9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38470
gene id: 3702:AT2G38470
uniprot id: A0A384L4W4
uniprot id: B3DNP2
uniprot id: Q8S8P5
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WRKY group I family.
messages: By salt stress (PubMed:18839316). Induced by infection with the necrotrophic fungal pathogen B.cinerea (PubMed:17059405, PubMed:21498677, PubMed:21990940). Induced by infection with the bacterial pathogen P.syringae pv. tomato DC3000 (PubMed:17059405).
messages: Highly expressed in roots, leaves and flowers, and at lower levels in stems, siliques and seeds.
messages: Interacts with MKS1 (PubMed:15990873). Interacts with ATG18A (PubMed:21395886). Interacts with SIB1 and SIB2 (PubMed:21990940). Interacts with VQ1 and VQ10 (PubMed:22535423).
messages: No visible phenotype under normal growth conditions, but mutant plants are extremely susceptible to the necrotrophic fungal pathogen B.cinerea.
messages: Nucleus
messages: Phosphorylated by MPK4 (PubMed:15990873). Phosphorylated on serine residues by MPK3 and MPK6 following infection with the necrotrophic fungal pathogen B.cinerea (PubMed:21498677).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor. Interacts specifically with the W box (5'-TTGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Involved in defense responses. Required for resistance to the necrotrophic fungal pathogen B.cinerea (PubMed:17059405, PubMed:21990940). Regulates the antagonistic relationship between defense pathways mediating responses to the bacterial pathogen P. syringae and the necrotrophic pathogen B.cinerea (PubMed:17059405). Required for the phytoalexin camalexin synthesis following infection with B.cinerea. Acts as positive regulator of the camalexin biosynthetic genes PAD3 (CYP71B15) and CYP71A13 by binding to their promoters (PubMed:21498677, PubMed:22392279). Acts downstream of MPK3 and MPK6 in reprogramming the expression of camalexin biosynthetic genes, which drives the metabolic flow to camalexin production (PubMed:21498677). Functions with WRKY25 as positive regulator of salt stress response and abscisic acid (ABA) signaling (PubMed:18839316). Functions with WRKY25 and WRKY26 as positive regulator of plant thermotolerance by partially participating in ethylene-response signal transduction pathway (PubMed:21336597). The DNA-binding activity of WRKY33 is increased by SIB1 and SIB2 (PubMed:21990940).

3702:AT4G34340
gene id: 3702:AT4G34340
uniprot id: Q9SYZ9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAF8 family.
messages: Component of the TFIID complex. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa. Can homodimerize. Interacts with TAF4B, TAF5, TAF10, TAF12, TAF12B, TAF13 and TAF14.
messages: Expressed in roots, leaves and inflorescences.
messages: Nucleus
messages: TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription.

3702:AT2G28500
gene id: 3702:AT2G28500
uniprot id: A0A654EY48
uniprot id: Q9SK08
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in young shoots, stems, leaves and flowers.

3702:AT1G29170
gene id: 3702:AT1G29170
uniprot id: A0A178WGL1
uniprot id: B3H466
uniprot id: B3H7L7
uniprot id: Q9LP46
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activates the Arp2/3 complex and binds actin through the C-terminal VCA (verprolin homology/cofilin homology/acidic) domain consisting of a WH2 domain followed by an Arp2/3-binding acidic motif (A), separated by a conserved linker region (C). Binds BRK1 through the N-terminal Scar homology domain (SHD).
messages: Belongs to the SCAR/WAVE family.
messages: Binds BRK1. Interacts with SPK1, ABI1, ABI2, ABI3 and ABI4.
messages: Expressed in expanding cotyledons, expanding leaves and expanding siliques containing developing embryos. Detected in unopened flower buds. Reduced expression in mature leaves and mature cotyledons.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex. Regulates trichome branch positioning and expansion.
messages: cytoskeleton

3702:AT1G05830
gene id: 3702:AT1G05830
uniprot id: P0CB22
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in adult plants, especially in rosette leaves and roots (but not in the vasculature and in tips) (PubMed:18375658). Weakly expressed in inflorescence nodes and at the base of the flowers (PubMed:18375658). In flowers, present in pollen and, at low levels, at the tips of the stigma (PubMed:18375658). In seedlings, observed in the vasculature and in the shoot apical meristems (PubMed:18375656).
messages: Activated via O-glycosylation.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
messages: Expressed in roots, leaves and flowers and, to a lower extent, in young seedlings.
messages: Histone methyltransferase (PubMed:18375658). Dimethylates 'Lys-4' of histone H3 (H3K4me2) (PubMed:18375658, PubMed:24102415). H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation (PubMed:18375658). Methylates only a limited fraction of nucleosomes of target genes (e.g. NAP and XTH33) (PubMed:18375658). Involved in epigenetic regulation of the floral repressor FLC and FT to prevent the transition from vegetative to reproductive development (PubMed:18375656, PubMed:24102415).
messages: No obvious phenotype except a slightly delayed abscission of sepals and petals after fertilization (PubMed:18375658). Reduced dimethylated 'Lys-4' histone H3 (H3K4me2) but normal trimethylated 'Lys-4' histone H3 (H3K4me3) at FLC, FT, NAP and XTH33 nucleosomes (PubMed:18375658, PubMed:24102415). Accelerated transition from vegetative to reproductive development (early flowering), especially in medium-day conditions (12 hours light / 12 hours dark), due to FLC and FT epigenetic misregulation (PubMed:18375656, PubMed:24102415). Altered transcription levels of target genes (PubMed:18375658). Decreased XTH33 but normal WRKY70 transcript levels in atx2 plants (PubMed:18375658).
messages: Nucleus

3702:AT4G10767
gene id: 3702:AT4G10767
uniprot id: P82640
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G66730
gene id: 3702:AT5G66730
uniprot id: Q9LVQ7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: At 3 days post anthesis (DPA), expressed in the chalazal endosperm region. By 6 DPA, expressed in the endosperm and embryo. In fully germinated seed, strongest expression in the root tip and not detected in the cotyledons. In 4-days old seedlings, restricted to the vasculature of the cotyledons, the shoot apical meristem region, and the root tip. By 8 days, restricted to newly emerged leaves.
messages: Interacts with the DELLA proteins (e.g. GAI/RGA2, RGA, RGL1, RGL2 and RGLG3), acting as coactivators.
messages: Nucleus
messages: Plants lacking both ENY/IDD1 and IDD2/GAF1 have a decreased responsiveness to gibberellic acid (GA).
messages: Strongly up-regulated during seed development.
messages: Transcription factor promoting the transition to germination by regulating light and hormonal signaling during seed maturation (PubMed:21571950). Acts as a positive regulator of phytochrome and/or gibberellin action (PubMed:21571950, PubMed:25035403).

3702:AT1G08065
gene id: 3702:AT1G08065
uniprot id: F4HUC4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: N-glycosylated.
messages: Reversible hydration of carbon dioxide.
messages: chloroplast stroma

3702:AT2G04690
gene id: 3702:AT2G04690
uniprot id: A0A178W272
uniprot id: A0A1P8AZ49
uniprot id: A0A384L3A5
uniprot id: F4IFA9
uniprot id: Q8RY62
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CREG family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G14080
gene id: 3702:AT3G14080
uniprot id: A0A178VDM0
uniprot id: A0A178VF08
uniprot id: A0A1I9LP34
uniprot id: A0A384KWF8
uniprot id: Q8LFL8
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the snRNP Sm proteins family.
messages: Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. LSM1A and LSM1B are essential for the formation of the cytoplasmic LSM1-LSM7 complex which regulates developmental gene expression by the decapping of specific development-related transcripts (PubMed:23221597, PubMed:23620288). Required for P-body formation during heat stress (PubMed:23221597).
messages: Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
messages: Component of the heptameric LSM1-LSM7 complex that forms a seven-membered ring structure with a donut shape.
messages: Component of the heptameric LSM1-LSM7 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM1, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM1B subunit interacts only with its two neighboring subunits, LSM2 and LSM4 (PubMed:23221597).
messages: Cytoplasm
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: No visible phenotype under normal growth conditions, but the double mutants lsm1a and lsm1b show severe developmental alterations, such as delayed seed germination, reduced root length, epinastic, chlorotic and small cotyledons, small and serrated leaves, abnormal venation in cotyledons and leaves, dwarf plants with early flowering, short siliques with reduced seed number and small morphologically alterated seeds.
messages: P-body
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G09700
gene id: 3702:AT1G09700
uniprot id: O04492
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By abscisic acid (ABA).
messages: Double-stranded RNA-binding protein involved in RNA-mediated post-transcriptional gene silencing (PTGS). Functions in the microRNAs (miRNAs) biogenesis by assisting DICER-LIKE 1 (DCL1) in the accurate processing from primary miRNAs (pri-miRNAs) to miRNAs in the nucleus. Forms a complex with SERRATE (SE) and DCL1 to promote accurate processing of pri-miRNAs by DCL1. Binds and assist DCL1 for accurate processing of precursor miRNAs (pre-miRNA). Indirectly involved in the production of trans-acting small interfering RNAs (ta-siRNAs) derived from the TAS1, TAS2 or TAS3 endogenous transcripts by participating in the production of their initiating miRNAs. Involved with argonaute 1 (AGO1) in the guide strand selection from miRNA duplexes, presumably by directional loading of the miRNA duplex (guide stand and passenger strand) onto the RNA-induced silencing complex (RISC) for passenger strand degradation. Does not participate in sense transgene-induced post-transcriptional gene silencing (S-PTGS). Involved in several plant development aspects and response to hormones through its role in miRNAs processing.
messages: Expressed in rosette and cauline leaves, stems, roots, flowers and siliques.
messages: Homodimer. Heterodimer with DRB2, DRB4 or DRB5. Interacts with SE and DCL1 (PubMed:15821876, PubMed:16428603, PubMed:16889646, PubMed:20462493). Interacts with RCF3, RS40 and RS41 (PubMed:26227967).
messages: Nucleus
messages: Nucleus speckle
messages: Plants overexpressing HYL1 show decreased stability of transcripts targeted by miRNAs.
messages: Short plant, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, altered root gravitropic response, decreased sensitivity to auxin and cytokinin and hypersensitivity to abscisic acid (ABA). Reduction of several miRNA accumulation.
messages: The dsRNA binding domains (dsRBDs) 1 and 2 are sufficient for the function in miRNA precursors processing and mature miRNA generation.

3702:AT5G46110
gene id: 3702:AT5G46110
uniprot id: A0A219HYB6
uniprot id: A0A219HZH3
uniprot id: A0A219I0W9
uniprot id: A0A5S9YBI1
uniprot id: Q9ZSR7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Expressed in shoots, leaves and flowers.
messages: Expressed with a circadian rhythm showing an increase during the day and a decrease at night under long day conditions.
messages: Membrane
messages: No visible phenotype under normal growth condition, but strong reduction of triose phosphate export from the chloroplast and reduced photosynthetic acclimation.
messages: Triose phosphate/phosphate translocator that transports inorganic phosphate, 3-phosphoglycerate (3-PGA) and triose phosphate. Functions in the export of photoassimilates from chloroplasts during the day. In the light, triose phosphates are exported from the chloroplast stroma in counter exchange with inorganic phosphate (Pi), generated during sucrose biosynthesis in the cytosol. Involved in photosynthetic acclimation, a light response resulting in increased tolerance to high-intensity light.
messages: chloroplast membrane

3702:AT1G13020
gene id: 3702:AT1G13020
uniprot id: Q9SAD7
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-4 subunit B family.
messages: Homodimer (By similarity). Nonspherical monomer. mRNA-discriminating component of initiation complexes (PubMed:19493973).
messages: Nucleus
messages: Over-expression in sns-D leads to programmed cell death (PCD) in the leaves characterized by spontaneous necrotic spots on the rosette leaves under aseptic conditions. Embryo lethal when homozygote.
messages: Phosphorylated.
messages: Promotes the eIF4F and eIF4A RNA-dependent ATP-hydrolysis activity with different efficiency depending on mRNAs, thus providing mRNA discrimination during initiation of translation.

3702:AT4G17050
gene id: 3702:AT4G17050
uniprot id: Q8GXV5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UGHY family.
messages: Endoplasmic reticulum
messages: Homooctamer.
messages: Involved in the catabolism of purine nucleotides. Can use (S)-2-ureidoglycine as substrate, but not allantoate. The sequential activity of AAH, UGLYAH and UAH allows a complete purine breakdown without the intermediate generation of urea.

3702:AT4G14950
gene id: 3702:AT4G14950
uniprot id: Q5XF36
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the VMP1 family.
messages: Endoplasmic reticulum membrane
messages: Involved in the early secretory pathway. Required for the correct export of secretory products from the endoplasmic reticulum (ER) and involved in the maintenance of ER integrity.

3702:AT3G57720
gene id: 3702:AT3G57720
uniprot id: A0A384LH69
uniprot id: Q9SVY6
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. ZRK subfamily.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT3G09010
gene id: 3702:AT3G09010
uniprot id: A0A1I9LME7
uniprot id: A0A384L9A3
uniprot id: Q8LF75
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G08680
gene id: 3702:AT5G08680
uniprot id: Q9C5A9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c (By similarity).
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT4G16120
gene id: 3702:AT4G16120
uniprot id: Q8GZ17
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the COBRA family.
messages: Cell membrane
messages: Expressed in roots, stems, leaves, flowers and siliques.

3702:AT4G35800
gene id: 3702:AT4G35800
uniprot id: A0A178UYS0
uniprot id: P18616
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family.
messages: Component of the RNA polymerase II (Pol II) complex consisting of at least 12 subunits. Interacts with RDM1. Interacts (via CTD) with PRP40A, PRP40B, PRP40C and CYP59 (PubMed:16497658, PubMed:19110459, PubMed:19467629, PubMed:20410883). Interacts with MEE12/CCG1 and MEE14/CBP1 (PubMed:26462908). Binds (via CTD) to ATX1, especially when phosphorylated on 'Ser-5' of the heptapeptide repeat (PubMed:21266657).
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB1 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template. At the start of transcription, a single-stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol II. A bridging helix emanates from NRPB1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol II by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition. During transcription elongation, Pol II moves on the template as the transcript elongates. Elongation is influenced by the phosphorylation status of the C-terminal domain (CTD) of Pol II largest subunit (NRPB1), which serves as a platform for assembly of factors that regulate transcription initiation, elongation, termination and mRNA processing.
messages: Nucleus
messages: The C-terminal domain (CTD) serves as a platform for assembly of factors that regulate transcription initiation, elongation, termination and mRNA processing.
messages: The binding of ribonucleoside triphosphate to the RNA polymerase II transcribing complex probably involves a two-step mechanism. The initial binding seems to occur at the entry (E) site and involves a magnesium ion temporarily coordinated by three conserved aspartate residues of the two largest RNA Pol II subunits. The ribonucleoside triphosphate is transferred by a rotation to the nucleotide addition (A) site for pairing with the template DNA. The catalytic A site involves three conserved aspartate residues of the RNA Pol II largest subunit which permanently coordinate a second magnesium ion.
messages: The tandem 7 residues repeats in the C-terminal domain (CTD) can be highly phosphorylated. The phosphorylation activates Pol II. Phosphorylation occurs mainly at residues 'Ser-2' and 'Ser-5' of the heptapeptide repeat. The phosphorylation state is believed to result from the balanced action of site-specific CTD kinases and phosphatase, and a 'CTD code' that specifies the position of Pol II within the transcription cycle has been proposed. ATX1 seems to regulate phosphorylation statment (PubMed:21266657). 'Ser-2' and 'Ser-5' phosphorylation are repressed by flavopiridol (Flap) and seliciclib (Selic), inhibitors of CDK7 and CDK9 (PubMed:21266657).

3702:AT1G53030
gene id: 3702:AT1G53030
uniprot id: A0A178W7R4
uniprot id: Q94FT1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COX17 family.
messages: Copper chaperone for cytochrome c oxidase (COX). Binds 2 copper ions and delivers them to the Cu(A) site of COX (By similarity).
messages: Mitochondrion intermembrane space

3702:AT2G40205
gene id: 3702:AT2G40205
uniprot id: A0A654EIW4
uniprot id: P62120
uniprot id: Q682R5
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein eL41 family.
messages: Component of the large ribosomal subunit.

3702:AT5G37930
gene id: 3702:AT5G37930
uniprot id: Q84K34
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT2G35040
gene id: 3702:AT2G35040
uniprot id: A0A5S9X4B6
uniprot id: O64767
uniprot id: Q8RWT5
names: Similarity
messages: Belongs to the PurH family.

3702:AT1G43780
gene id: 3702:AT1G43780
uniprot id: A0A178WN63
uniprot id: Q9MAR8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT3G43550
gene id: 3702:AT3G43550
uniprot id: Q3EAQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT1G09410
gene id: 3702:AT1G09410
uniprot id: A0A178WG80
uniprot id: Q56XI1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G44190
gene id: 3702:AT5G44190
uniprot id: A0A1P8BF90
uniprot id: A0A654G8C9
uniprot id: Q9FFH0
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By light. Repressed by BZR2.
messages: Expressed in cotyledons and rosette and cauline leaves. Expressed at low levels in roots, shoots, flowers and siliques.
messages: Interacts with NAC92.
messages: Nucleus
messages: Pale green siliques (PubMed:12220263). Pale-green seedlings in double mutants glk1/glk2 (PubMed:23459204).
messages: Plants overexpressing GLK2 have a delay in flowering under long days.
messages: Transcriptional activator that functions with GLK1 to promote chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. Acts in a cell-autonomous manner to coordinate and maintain the photosynthetic apparatus within individual cells. May function in photosynthetic capacity optimization by integrating responses to variable environmental and endogenous cues (PubMed:11828027, PubMed:12220263, PubMed:18643989, PubMed:19376934, PubMed:19383092, PubMed:19726569). Prevents premature senescence (PubMed:23459204).

3702:AT2G29290
gene id: 3702:AT2G29290
uniprot id: A0A178VX70
uniprot id: Q9ZW13
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.

3702:AT1G57600
gene id: 3702:AT1G57600
uniprot id: A0A1P8AMY6
uniprot id: A0A384KQ39
uniprot id: Q8RY80
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G63090
gene id: 3702:AT1G63090
uniprot id: A0A178W4F1
uniprot id: Q9CAN4
names: Caution
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1.
messages: The F-box is necessary for the interaction with ASK proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G22590
gene id: 3702:AT3G22590
uniprot id: A0A178VJ60
uniprot id: Q9LJ87
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CDC73 family.
messages: Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3) (PubMed:20363855). Involved in regulation of flowering time. Required for the expression of the flowering repressors FLC and MADS-box genes of the MAF family. Required for histone H3 trimethylation on 'Lys-4' (H3K4me3) at the FLC locus (PubMed:20363855, PubMed:20463090). Prevents trimethylation on 'Lys-27' (H3K27me3) at the same locus (PubMed:20363855).
messages: Component of the nuclear PAF1 complex (PAF1C), which consists of VIP2/ELF7/PAF1, VIP3/SKI8/WDR61, VIP4/LEO1, VIP5/RTF1, VIP6/ELF8/CTR9 and CDC73.
messages: Early flowering.
messages: Expressed in root tips, shoot apex, young leaves and flowers, especially in stamen filaments and carpels.
messages: Nucleus

3702:AT3G48190
gene id: 3702:AT3G48190
uniprot id: A0A1I9LQ78
uniprot id: A0A1I9LQ79
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G28880
gene id: 3702:AT2G28880
uniprot id: A0A654EX35
uniprot id: Q8LPN3
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by chorismate and inhibited by dihydrofolate and methotrexate.
messages: Bifunctional enzyme that catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine. In the first step, a glutamine amidotransferase generates ammonia that is channelled between the binding sites of glutamine and chorismate and used along with chorismate in the second step, catalyzed by aminodeoxychorismate synthase, to produce ADC. Required for the synthesis of 4-aminobenzoate (PABA), an important component in tetrahydrofolate biosynthesis. Does not possess ADC lyase activity.
messages: In the C-terminal section; belongs to the anthranilate synthase component I family.
messages: The PABA component provides the glutamine amidotransferase activity.
messages: The PABB component catalyzes the formation of ADC by binding chorismate and ammonia.
messages: chloroplast

3702:AT2G01520
gene id: 3702:AT2G01520
uniprot id: Q9ZVF3
names: Similarity
messages: Belongs to the MLP family.

3702:AT1G56233
gene id: 3702:AT1G56233
uniprot id: Q2V4G6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G25290
gene id: 3702:AT2G25290
uniprot id: F4IRM4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Carboxylate clamp type tetratricopeptide repeat protein that may act as a potential Hsp90/Hsp70 co-chaperone (PubMed:20856808). Contributes to polar growth of root hairs (PubMed:28096376).
messages: Cytoplasmic vesicle membrane
messages: Interacts with myosin XI-1 and XI-K.
messages: No clumped-chloroplasts phenotype (PubMed:22025705). 31% reduction in root hair growth (PubMed:28096376). Phox1 and phox4 double mutants show no clumped-chloroplasts phenotype, but a 46% reduction in root hair growth (PubMed:22025705, PubMed:28096376). Phox1, phox3 and phox4 triple mutants and phox1, phox2, phox3 and phox4 quadruple mutants show a 70% reduction in root hair growth (PubMed:28096376).

3702:AT5G52450
gene id: 3702:AT5G52450
uniprot id: A0A178UMN3
uniprot id: Q9FHB6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT1G66750
gene id: 3702:AT1G66750
uniprot id: A0A178WBE6
uniprot id: Q9C9M7
names: Activity Regulation
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by phosphorylation by CDKF-1. Down-regulated by phosphorylation by WEE1.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Cytoplasm
messages: Expressed in suspension cell culture, but not in plant organs.
messages: Forms a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.
messages: Interacts with CYCH1-1. Binding to CYCH1-1 activates CDK kinase.
messages: Nucleus
messages: Phosphorylated by CDKF-1 at Ser-162 and Thr-168. Phosphorylated by WEE1 at Tyr-24. Autophosphorylated.

3702:AT1G26650
gene id: 3702:AT1G26650
uniprot id: A0A178W4E5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02100
gene id: 3702:AT1G02100
uniprot id: F4HVW3
uniprot id: Q8VY08
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. LCMT family.
messages: Cytoplasm
messages: Induced by brassinosteroids.
messages: Involved in brassinosteroid (BR) signaling.
messages: Membrane
messages: Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A (PP2A) catalytic subunits to form alpha-leucine ester residues (Probable) (PubMed:21558554). Involved in brassinosteroid (BR) signaling. Plays a negative role in BR signaling pathway. Functions as a positive regulator of BRI1 receptor-kinase degradation. Methylates PP2A, thus facilitating its association with activated BRI1. This leads to receptor dephosphorylation and degradation, and thus to the termination of BR signaling. May act upstream of ASK7/BIN2 (PubMed:21558554). Involved in methylation of PP2A during environemental stress responses (PubMed:28741704).
messages: Reduced rosette size and early flowering. Reduced length of the main root and reduced number of lateral roots.

3702:AT4G11840
gene id: 3702:AT4G11840
uniprot id: A0A1P8B8B3
uniprot id: Q9T052
names: Activity Regulation
names: Caution
names: Cofactor
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by wounding, heavy metal, methyl salicylate, osmotic and salt stresses.
messages: Belongs to the phospholipase D family. C2-PLD subfamily.
messages: C2 domain is a calcium-binding fold, and the binding promotes the protein association with membranes. In PLD gamma, all the calcium-coordinating acidic amino acids are conserved.
messages: Ca(2+). Requires micromolar level (PIP2-dependent).
messages: Cytoplasm
messages: Highly expressed in inflorescences and old leaves, moderately in stems, roots, siliques and young leaves and low in flowers.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Plays an important role in various cellular processes, including phytohormone action, vesicular trafficking, secretion, cytoskeletal arrangement, meiosis, tumor promotion, pathogenesis, membrane deterioration and senescence. Can use phosphatidylserine but prefers ethanolamine-containing lipids as substrates.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
messages: Inhibited by neomycin.
messages: It is uncertain whether Met-1 or Met-11 is the initiator.
messages: It is uncertain whether the sequence from 46 to 76 is encoded by an intron as for PLDGAMMA2.
messages: Membrane
messages: Presence of a putative myristoylation site MGXXXS (Gly-14).

3702:AT5G57990
gene id: 3702:AT5G57990
uniprot id: A0A5S9YF24
uniprot id: Q9FPS4
names: Function
names: Similarity
messages: Belongs to the peptidase C19 family.
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.

3702:AT5G43580
gene id: 3702:AT5G43580
uniprot id: F4K627
names: Similarity
messages: Belongs to the protease inhibitor I13 (potato type I serine protease inhibitor) family.

3702:AT2G14835
gene id: 3702:AT2G14835
uniprot id: Q944Q6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZFPL1 family.
messages: Membrane

3702:AT4G28450
gene id: 3702:AT4G28450
uniprot id: A0A178UZJ7
uniprot id: Q93VK1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat DCAF13/WDSOF1 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus

3702:AT1G69825
gene id: 3702:AT1G69825
uniprot id: Q2V4D6
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G28080
gene id: 3702:AT5G28080
uniprot id: Q2V338
names: Caution
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.
messages: May regulate flowering time by modulating the photoperiod pathway.
messages: Was named WNK/'with no lysine(K)' because key residues for catalysis, including the lysine involved in ATP binding, are either not conserved or differ compared to the residues described in other kinase family proteins.

3702:AT4G04790
gene id: 3702:AT4G04790
uniprot id: A0A1P8B7X8
uniprot id: A0A1P8B7Y0
uniprot id: Q6NQ81
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G54460
gene id: 3702:AT3G54460
uniprot id: Q9M1I1
names: Similarity
messages: Belongs to the helicase family.

3702:AT3G11730
gene id: 3702:AT3G11730
uniprot id: Q9ZRE2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Does not interact with GC5. Interacts with XI-2/MYA2.
messages: Golgi apparatus membrane
messages: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER).
messages: trans-Golgi network membrane

3702:AT5G67190
gene id: 3702:AT5G67190
uniprot id: A0A5S9YJS7
uniprot id: Q9FH94
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G02060
gene id: 3702:AT1G02060
uniprot id: A0A178W3L0
uniprot id: O81908
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT3G16770
gene id: 3702:AT3G16770
uniprot id: A0A654F7W0
uniprot id: P42736
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By 1-aminocyclopropane-1-carboxylic acid (ACC, ethylene precursor), methyl jasmonate (MeJA), and Botrytis cinerea. Also induced by cadmium.
messages: Cell membrane
messages: Cytoplasm
messages: Interacts with TGA4/OBF4, ACBP2, and ACBP4.
messages: Mostly expressed in stems and leaves, and, to a lower extent, in roots, siliques and flowers.
messages: Nucleus
messages: Probable cloning artifact leading to an insertion into the sequence.
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G66470
gene id: 3702:AT1G66470
uniprot id: A0A178W430
uniprot id: Q9C707
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in flowers (PubMed:12679534). Expressed in root epidermal hair cells (PubMed:17556585).
messages: Homodimer (Probable). Forms heterodimers with RSL1 (PubMed:31988260). Interacts with TIFY10B/JAZ2, TIFY6A/JAZ4, TIFY5A/JAZ8, TIFY7/JAZ9 and TIFY9/JAZ10 (PubMed:31988260).
messages: Induced by jasmonate (JA) treatment.
messages: Nucleus
messages: Strong reduction in root hair number and density in seedlings (PubMed:17556585). The double mutant seedlings rhd6-3 and rsl1-1 do not develop root hairs (PubMed:17556585).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor that is specifically required for the development of root hairs (PubMed:17556585). Acts with RSL1 to positively regulate root hair development (PubMed:17556585). Acts downstream of genes that regulate epidermal pattern formation, such as GL2 (PubMed:17556585). Targets directly RSL4, another transcription factor involved in the regulation of root hair elongation (PubMed:20139979). Acts with RSL1 as transcription factor that integrates a jasmonate (JA) signaling pathway that stimulates root hair growth (PubMed:31988260).

3702:AT2G41130
gene id: 3702:AT2G41130
uniprot id: A0A178VRM6
uniprot id: O80674
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT5G39830
gene id: 3702:AT5G39830
uniprot id: A0A178ULP8
uniprot id: F4KFV6
uniprot id: Q9LU10
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S1C family.
messages: Probable serine protease.
messages: chloroplast thylakoid lumen

3702:AT2G35035
gene id: 3702:AT2G35035
uniprot id: A0A178VPQ5
uniprot id: F4IIY7
uniprot id: Q7Y0S0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the UreD family.
messages: No visible phenotype under normal growth conditions, but mutant plants cannot grow on medium with urea as the sole source of nitrogen.
messages: Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter.
messages: URED, UREF and UREG may form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein.

3702:AT1G09760
gene id: 3702:AT1G09760
uniprot id: P43333
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the U2 small nuclear ribonucleoprotein A family.
messages: Nucleus
messages: This protein is associated with sn-RNP U2. It helps the A' protein to bind stem loop IV of U2 snRNA (By similarity).

3702:AT3G14250
gene id: 3702:AT3G14250
uniprot id: Q1PEQ5
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT3G55890
gene id: 3702:AT3G55890
uniprot id: A0A1I9LL83
uniprot id: A0A384KWG8
uniprot id: Q0WPD7
uniprot id: Q9LY56
names: Similarity
messages: Belongs to the yippee family.

3702:AT5G65570
gene id: 3702:AT5G65570
uniprot id: A0A178UD35
uniprot id: Q9LSL8
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT4G18590
gene id: 3702:AT4G18590
uniprot id: A0A178V2X5
uniprot id: Q6NLG7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As part of the replication protein A (RPA/RP-A), a single-stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism (By similarity).
messages: Belongs to the replication factor A protein 3 family.
messages: Component of the heterotrimeric canonical replication protein A complex (RPA).
messages: Nucleus

3702:AT5G41760
gene id: 3702:AT5G41760
uniprot id: A0A654G729
uniprot id: Q8LGE9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleotide-sugar transporter family. CMP-Sialate:CMP antiporter (TC 2.A.7.12) subfamily.
messages: Essential protein. Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT3G63300
gene id: 3702:AT3G63300
uniprot id: Q8W4K5
names: Subunit
messages: Interacts with VAN3.

3702:AT4G39800
gene id: 3702:AT4G39800
uniprot id: A0A384KJU9
uniprot id: C4PW05
uniprot id: P42801
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the myo-inositol 1-phosphate synthase family.
messages: Expressed in siliques, leaves, roots, seed endosperm, but not in embryos. Highest expression in leaves, but restricted to vascular tissue in older leaves.
messages: Homotrimer or homotetramer. Interacts with ATXR5 and ATXR6.
messages: Key enzyme in myo-inositol biosynthesis pathway that catalyzes the conversion of glucose 6-phosphate to 1-myo-inositol 1-phosphate in a NAD-dependent manner (PubMed:20215587). Catalyzes the majority of myo-inositol synthesis required for plant growth and development (PubMed:20215587). Acts as a repressor of programmed cell death and protects plant cells against cell death under high light intensity or long days (PubMed:20215587). Controls its own transcription by inhibiting ATXR6 activity (PubMed:23341037). Reduces the deposition of inhibitory histone marks on its own promoter (PubMed:23341037).
messages: Nucleus
messages: Shorter seedlings with deformed cotyledons and altered root cap organization. Spontaneous lesion formation on mature leaves when plants are transferred under long days. Enhanced basal resistance to pathogens and increased sensitivity to abscisic acid during seed germination and root growth.
messages: Up-regulated by the IPS1 protein itself. Down-regulate upon flagellin treatment.
messages: Was called MIPS2.
messages: cytosol

3702:AT4G28800
gene id: 3702:AT4G28800
uniprot id: A0A1P8B7L8
uniprot id: A0A2H1ZEQ1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G23960
gene id: 3702:AT2G23960
uniprot id: A0A1P8AXE1
uniprot id: A0A5S9X0U4
uniprot id: F4INN2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C26 family.
messages: Involved in glucosinolate biosynthesis. Hydrolyzes the gamma-glutamyl peptide bond of several glutathione (GSH) conjugates to produce Cys-Gly conjugates related to glucosinolates. The gamma-Glu-Cys-Gly-GSH conjugates are the sulfur-donating molecule in glucosinolate biosynthesis.
messages: cytosol

3702:AT3G16440
gene id: 3702:AT3G16440
uniprot id: A0A1I9LLA7
uniprot id: O04312
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the jacalin lectin family.
messages: Defects in female gametophyte development. Arrested during endosperm development.
messages: Involved in gametophytic development.

3702:AT4G18810
gene id: 3702:AT4G18810
uniprot id: A0A178UYQ1
uniprot id: F4JRN8
uniprot id: Q8VYA4
names: Similarity
messages: Belongs to the CIA30 family.

3702:AT4G31880
gene id: 3702:AT4G31880
uniprot id: Q8GUP3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PDS5 family.
messages: Cohesin cofactor dispensable during the meiotic division but playing an important role in DNA repair by homologous recombination (HR) probably by helping SMC5/SMC6 complex (PubMed:26648949). Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin (PubMed:26648949). May couple sister chromatid cohesion during mitosis to DNA replication (By similarity). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (PubMed:26648949).
messages: Interacts with the cohesin complex.
messages: Nucleus
messages: Weak impact on meiosis such as formation of some chromosome bridges at late anaphase I and telophase I in forming pollen, but severe effects on development, fertility, somatic homologous recombination (HR) and DNA repair, especially in plants lacking PDS5A, PDS5B, PDS5C, PDS5D and PDS5E.

3702:AT2G07708
gene id: 3702:AT2G07708
uniprot id: P93305
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07708) is demonstrated.
messages: Mitochondrion

3702:AT5G42380
gene id: 3702:AT5G42380
uniprot id: Q9FIH9
names: Caution
names: Function
names: Induction
names: Subunit
names: Tissue Specificity
messages: Although assigned as a calmodulin family member by Ref.5, it only contains EF-hand domains.
messages: Binds to ABCG36.
messages: By touch, salt and hydrogen peroxide treatments, drought stress, wounding, dark and infection by the bacterial pathogen P.syringae.
messages: Expressed in cotyledons, stipule, young leaves and at the hypocotyl-root junction. In mature root, expressed in the stele, cortex, emerging lateral root, root tip and root cap. In mature plant, expressed at the base of cauline and floral branches, and in rosette and cauline leaves. Expressed from stage 9 to 14 of flower development in anthers. At stage 15, expressed in carpel, sepals, petals and pollen until dehiscence. Expressed in developing seeds and young siliques.
messages: Potential calcium sensor that binds calcium in vitro.

3702:AT5G22750
gene id: 3702:AT5G22750
uniprot id: A0A7G2F9F0
uniprot id: Q9FNI6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
messages: Functions in error-free postreplication DNA repair or DNA-damage tolerance (DTT) pathway (PubMed:18310306, PubMed:21549648). Required for homologous recombination (HR) induced by DNA double-strand break (DSB) in somatic cells (PubMed:18310306). Required for damage-induced DNA repair, independently of MUS81 and RECQL4A. Plays a role in synthesis-dependent strand annealing (SDSA) but not in single-strand annealing (SSA) (PubMed:20971895). Possesses double-stranded DNA-dependent ATPase activity. Is able to regress replication forks with preference for forks with a leading strand gap. Is able to catalyze branch migration of Holliday junctions and is unaffected by protein blockades (PubMed:27458713).
messages: Nucleus

3702:AT4G18190
gene id: 3702:AT4G18190
uniprot id: A0A654FQF6
uniprot id: O49722
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT2G43570
gene id: 3702:AT2G43570
uniprot id: A0A178W3M3
uniprot id: O24603
names: Caution
names: Induction
names: Similarity
messages: Accumulates during senescence and in response to 3-amino-1,2,4-triazole (3-AT) and silver nitrate (PubMed:12947053). Induced by viral infection (e.g. cucumber mosaic cucumovirus, oil seed rape tobamovirus, turnip vein clearing tobamovirus, potato virus X potexvirus, and turnip mosaic potyvirus) (PubMed:12535341). Induced by pathogens (PubMed:12920300).
messages: Belongs to the glycosyl hydrolase 19 family. Chitinase class I subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT1G10460
gene id: 3702:AT1G10460
uniprot id: A0A384KJ98
uniprot id: A0JQ79
uniprot id: P92998
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast

3702:AT1G66590
gene id: 3702:AT1G66590
uniprot id: A0A178WM12
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G30560
gene id: 3702:AT4G30560
uniprot id: A0A384L7C9
uniprot id: A0A5S9XXR7
uniprot id: F4JQC2
uniprot id: Q9M0A4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Membrane
messages: Putative cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT4G18205
gene id: 3702:AT4G18205
uniprot id: A0A654FQI8
uniprot id: Q8RY74
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT1G29880
gene id: 3702:AT1G29880
uniprot id: O23627
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the ATP-dependent ligation of glycine to the 3'-end of its cognate tRNA, via the formation of an aminoacyl-adenylate intermediate (Gly-AMP). Also produces diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs. Thereby, may play a special role in Ap4A homeostasis.
messages: Homodimer.
messages: Mitochondrion
messages: cytosol

3702:AT1G15030
gene id: 3702:AT1G15030
uniprot id: A0A384KSP4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G42160
gene id: 3702:AT2G42160
uniprot id: E5KGE0
names: Disruption Phenotype
names: Function
names: Subunit
messages: Component of the heteromeric E3 ligase complex made of BRIZ1 and BRIZ2 (PubMed:20810661). Forms heterooligomers with BRIZ2 via coiled-coil domains (PubMed:20810661).
messages: RING-type ubiquitin E3 ligase required for seed germination and post-germination growth.
messages: Viable heterozygous plants seeds are slow to emerge from the seed coat; emerged embryos remains white with unexpanded cotyledons thus leading to growth-arrested seedlings.

3702:AT1G74270
gene id: 3702:AT1G74270
uniprot id: A0A5S9WUA2
uniprot id: Q9C912
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL33 family.

3702:AT5G60690
gene id: 3702:AT5G60690
uniprot id: A0A654GCU6
uniprot id: Q9SE43
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class III subfamily.
messages: By auxin. Repressed by ZPR and miR165. Induced by DOF5.1 (PubMed:20807212).
messages: Expressed at the earliest stages and throughout LSM initiation and development. In embryo development, expressed at the heart stage until the 'walking stick' stage in the adaxial portion of the cotyledon primordia, the shoot apical meristem (SAM) and the vascular precursor cells of the hypocotyl and root. In developing flowers, expressed first at stage 1 in the center of L3 layer and then expands to the center of L2 and L1 layers. Expressed in the center of flower meristem through stages 4 and 5. At stage 6, expressed in the adaxial side of the carpel primordia and then on the adaxial carpel face.
messages: Expressed in the interfascicular regions of stem and vascular bundles of young roots and leaves.
messages: Homodimer (Probable). Heterodimer with ZPR1, ZPR2, ZPR3 or ZPR4 (PubMed:18055602). Interacts with ESR1 and ESR2 (PubMed:17376809). Interacts with ZPR1, ZPR2, ZPR3 and ZPR4 (PubMed:18055602, PubMed:18408069). Heterodimerization with ZPR3 prevents DNA binding by REV (PubMed:18055602).
messages: Nucleus
messages: Plants display strongly reduced auxin polar transport in inflorescence stems and hypocotyls. This phenotype is probably due to altered cell differentiation and morphology (PubMed:11402186). Repression by miR165 suppresses DOF5.1 over-expression mediated upward-curling phenotype (PubMed:20807212).
messages: Probable transcription factor involved in the regulation of interfascicular fiber (cortical cells) and secondary xylem differentiation in the inflorescence stems. Required for lateral shoot meristems (LSMs) and flower meristems (FMs) initiation. May be involved in the determination of vascular patterning and organ polarity (PubMed:10559440, PubMed:11169198, PubMed:11402186, PubMed:15111711, PubMed:15598805, PubMed:7555701). Directly regulates the expression of AGO10, ZPR1, ZPR2, ZPR3 and ZPR4 (PubMed:22781836). Required to regulate adaxial-abaxial polarity and leaf axial patterning (PubMed:20807212).

3702:AT1G55460
gene id: 3702:AT1G55460
uniprot id: A0A654EJ78
uniprot id: Q9ZVU5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the KIN17 family.
messages: Expressed in root vasculature, lateral roots, cotyledons, rosette leaves, cauline leaves, stems, sepals, style of pistils, mature pollen grains and siliques.
messages: Interacts with SPL7.
messages: Nucleus speckle
messages: Plants silencing KIN17 show aberrant growth and reduced fertility.
messages: Promotes the copper deficiency response by direct interaction with SPL7. Acts with SPL7 in a common pathway to promote copper-responsive genes and alleviate oxidative stress during copper-limiting periods. May promote SPL7 function when copper is limiting (PubMed:24335506). Participates in the control of general plant growth and development, and in the response to counteract the negative effects of UV radiation (PubMed:24713636).

3702:AT2G18030
gene id: 3702:AT2G18030
uniprot id: A0A178W246
uniprot id: Q9SL43
names: Caution
names: Function
names: Similarity
messages: Belongs to the MsrA Met sulfoxide reductase family.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRA family specifically reduces the MetSO S-enantiomer (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G55252
gene id: 3702:AT3G55252
uniprot id: Q1G395
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT3G02970
gene id: 3702:AT3G02970
uniprot id: Q9M8T8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EXORDIUM family.
messages: May play a role in a brassinosteroid-dependent regulation of growth and development.
messages: Secreted
messages: apoplast
messages: extracellular space

3702:AT1G29750
gene id: 3702:AT1G29750
uniprot id: Q9FXF2
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: First detected in early flower primordia and during stamen development. Later expressed in anthers and in pollen.
messages: Membrane
messages: Mostly expressed in flower buds, especially in stamens.

3702:AT3G46790
gene id: 3702:AT3G46790
uniprot id: Q9STF3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Required for the intergenic processing between chloroplast rsp7 and ndhB transcripts.
messages: chloroplast

3702:AT5G01890
gene id: 3702:AT5G01890
uniprot id: Q9LZV7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in the vascular strands of cotyledons, the shoot apex, hypocotyls, roots, leaves, stems and flowers.
messages: Leucine-rich repeat receptor-like protein kinase that may play a role in vascular tissues development.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT4G11060
gene id: 3702:AT4G11060
uniprot id: A0A654FN52
uniprot id: Q546B8
uniprot id: Q84J78
names: Function
names: Subcellular Location Annotation
messages: Binds to ss-DNA.
messages: Mitochondrion

3702:AT3G59760
gene id: 3702:AT3G59760
uniprot id: B9DFR6
uniprot id: F4J9F7
uniprot id: Q0WWQ5
uniprot id: Q43725
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a cysteine synthase. Plays a role in the sulfide detoxification in mitochondria.
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.
messages: Homodimer (By similarity). Interacts with SAT3. Component of the cysteine synthase complex (CSC) composed of two OAS-TL dimers and one SAT hexamer.
messages: Mitochondrion
messages: No visible phenotype but displays lower levels of thiols in roots (PubMed:18024555). Growth retardation (PubMed:18223034). Defects in root hair formation (PubMed:22511607).

3702:AT1G12980
gene id: 3702:AT1G12980
uniprot id: Q9SAD4
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Dornroeschen' means 'Sleeping beauty' in German.
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By cytokinins.
messages: Expressed in shoot apical and floral meristems, and in organ primordia. Transient expression during shoot regeneration.
messages: First observed in the embryo at four-cell stage. At the globular stage, localized in cotyledons primordia. Later confined to embryonic cotyledons tips. Expressed from embryogenesis onward in the central zone of the shoot apical and floral meristems, in organ anlagen, and (transiently) in the distal domains of organ primordia.
messages: Interacts with class 3 HD-ZIP proteins such as ATHB-8, CNA, PHB, PHV, and REV.
messages: Nucleus
messages: Regulates gene expression patterns in meristems and thus modulates organ development. Required for correct embryo patterning and cotyledon organogenesis. Modulates auxin signaling pathway in early embryos. Involved in the cytokinin signaling pathway that promotes shoot regeneration. Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G24740
gene id: 3702:AT2G24740
uniprot id: Q9C5P0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Although the SET domain contains the active site of enzymatic activity, both pre-SET and post-SET domains are required for methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Cys residues in the pre-SET domain normally bind 3 zinc ions that are arranged in a triangular cluster, but here these Cys residues are only partially conserved, suggesting that the pre-Set domain may not bind a zinc cluster.
messages: Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression.
messages: Nucleus
messages: centromere

3702:AT2G34720
gene id: 3702:AT2G34720
uniprot id: A0A178VWS5
uniprot id: A0A1P8AYC2
uniprot id: Q8VY64
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYA/HAP2 subunit family.
messages: Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.
messages: Expressed in stems, caulines, and senescent flowers.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding.
messages: Nucleus
messages: Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

3702:AT1G54640
gene id: 3702:AT1G54640
uniprot id: A0A178WEA0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G51740
gene id: 3702:AT1G51740
uniprot id: A0A654EMN3
uniprot id: P59277
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the syntaxin family.
messages: Membrane
messages: Part of the t-SNARE complex. Interacts with MAG2 (PubMed:17194767).
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT1G62800
gene id: 3702:AT1G62800
uniprot id: A0A1P8APT9
uniprot id: F4I0D4
uniprot id: P46646
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Cytoplasm
messages: Homodimer.
messages: Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.
messages: In eukaryotes there are cytoplasmic, mitochondrial and chloroplastic isozymes.

3702:AT2G40140
gene id: 3702:AT2G40140
uniprot id: Q9XEE6
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By salt stress.
messages: Expressed in roots and anthers.
messages: Involved in salt stress response. May positively modulate plant tolerance to salt stress.
messages: Nucleus

3702:AT2G27250
gene id: 3702:AT2G27250
uniprot id: Q9XF04
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation.
messages: First detected in heart stage embryos in a patch of cells between the developing cotyledons. In vegetative and inflorescence meristems, expressed in a small cone of cells at the meristem apex.
messages: His-81 seems to be essential for the activity of MCLV3.
messages: Interacts with the extracellular leucine-rich repeat region of CLV1 (PubMed:18202283, PubMed:19525968). Interacts with CLV2 (PubMed:20626648). CLV3-derived CLE peptides interacts with a tetrameric complex made of two CLV2/CRN heterodimers (PubMed:20697738).
messages: May be due to intron retention.
messages: May be due to introns retention.
messages: The MCLV3 peptide contains two hydroxyprolines, but hydroxylation had no direct effect on MCLV3 activity.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline P-76 enhances binding affinity of the MCLV3 peptide for its receptor.
messages: The secreted peptide MCLV3 activates a signal transduction cascade to restrict WUSCHEL (WUS) expression, inducing shoot and root meristem consumption as cells differentiated into other organs.
messages: extracellular space

3702:AT3G10600
gene id: 3702:AT3G10600
uniprot id: A0A1I9LM42
uniprot id: A0A7G2ENX4
uniprot id: Q9SQZ0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Membrane
messages: Permease involved in the transport of the cationic amino acids.
messages: chloroplast membrane

3702:AT3G21790
gene id: 3702:AT3G21790
uniprot id: A0A178VG15
uniprot id: Q9LSY5
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G70670
gene id: 3702:AT1G70670
uniprot id: Q9CAB7
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the caleosin family.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group.
messages: Calcium-binding peroxygenase involved in the degradation of storage lipid in oil bodies. May be involved in the interaction between oil bodies and vacuoles during seed germination (By similarity). Acts as a negative regulator of abscisic acid responses in non-seed tissues.
messages: Down-regulated by abscisic acid and high salt. Not induced by salt stress or desiccation.
messages: Expressed in roots, leaves, stems, shoots, flowers and germinated seeds. Barely detected in dry seeds prior to germination. Preferentially expressed in vascular bundles and in guard cells.
messages: Homodimer.
messages: Lipid droplet
messages: No visible phenotype, but increased sensitivity to exogenous abscisic acid and osmotic stresses. Increased drought tolerance.
messages: The proline-knot motif (70-79) may be involved in targeting to lipid bodies.
messages: Transmembrane regions are predicted by sequence analysis tools, but these regions probably constitute hydrophobic domains associated to phospholipids.

3702:AT1G34580
gene id: 3702:AT1G34580
uniprot id: A0A1P8ANW3
uniprot id: Q93Y91
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Mediates an active uptake of hexoses, probably by sugar/hydrogen symport.
messages: Membrane

3702:AT5G55820
gene id: 3702:AT5G55820
uniprot id: A0A1P8BE37
uniprot id: A0A1P8BE52
uniprot id: A0A1P8BE53
uniprot id: A0A1P8BE54
uniprot id: A0A1P8BE57
uniprot id: A0A1P8BE61
uniprot id: A0A1P8BE62
uniprot id: A0A1P8BE82
uniprot id: G3GBK1
uniprot id: Q9FM57
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the INCENP family.
messages: Nucleus
messages: spindle

3702:AT1G32300
gene id: 3702:AT1G32300
uniprot id: Q9C614
names: Function
names: Similarity
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: May be involved in the biosynthesis of ascorbic acid.

3702:AT2G02290
gene id: 3702:AT2G02290
uniprot id: Q9ZVR2
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: This promotes the activity of RNA polymerase II.

3702:AT1G32220
gene id: 3702:AT1G32220
uniprot id: Q9FVR6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: plastoglobule

3702:AT2G36700
gene id: 3702:AT2G36700
uniprot id: Q9ZQA4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in flower buds.
messages: cell wall

3702:AT2G21750
gene id: 3702:AT2G21750
uniprot id: Q9SJ23
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant egg cell-secreted peptide family.
messages: Confined to the egg cell before fertilization, but disappears upon gamete fusion. Also present in zygotes and early embryos.
messages: Cytoplasmic vesicle
messages: Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
messages: Restricted to female reproductive tissues, specifically accumulating in storage vesicles of the unfertilized egg cell.
messages: Secreted

3702:AT1G60770
gene id: 3702:AT1G60770
uniprot id: O22714
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G28390
gene id: 3702:AT2G28390
uniprot id: Q9SKN1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MON1/SAND family.
messages: Due to the stability of its transcription during plant development, this gene is proposed as a reference gene for transcript normalization.
messages: Endosome
messages: Interacts with CCZ1A, CCZ1B and RABF2B.
messages: Plays an important role in membrane trafficking through the secretory apparatus. In complex with CCZ1, acts as a guanine exchange factor (GEF) for RABG3F of the Rab7 protein family. Promotes the exchange of GDP to GTP, converting RABG3F from an inactive GDP-bound form into an active GTP-bound form. The RABG3F active form is involved in protein trafficking from prevacuolar compartments (PVCs) to vacuoles. May serve as a linker between Rab5 and Rab7 protein families in PVCs and mediate PVC maturation.
messages: Prevacuolar compartment
messages: Severe plant growth defects, such as short root phenotype, retarded growth and dwarf phenotype.
messages: Widely expressed at stable levels.

3702:AT3G51130
gene id: 3702:AT3G51130
uniprot id: Q9SD33
names: Similarity
messages: Belongs to the PHAF1 family.

3702:AT4G38220
gene id: 3702:AT4G38220
uniprot id: A0A5S9XZR0
uniprot id: A0A654FX23
uniprot id: F4JTK8
uniprot id: Q8S9L3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M20A family.
messages: Cytoplasm

3702:AT4G22210
gene id: 3702:AT4G22210
uniprot id: P82794
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G25810
gene id: 3702:AT4G25810
uniprot id: A0A654FSY0
uniprot id: Q38910
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: By auxin and brassinolide. Up-regulated by abscisic acid (ABA).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT1G34180
gene id: 3702:AT1G34180
uniprot id: A4FVP6
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By cold, salt, drought stress and methyl methanesulfonate (MMS) treatment.
messages: Expressed in roots, rosette leaves, shoot apex, stems and flowers.
messages: Induced during normal senescence.
messages: Membrane
messages: Nucleus
messages: Stay-green phenotype during senescence, salt stress and oxidative stress.
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcriptional activator that promotes leaf senescence by up-regulating senescence-associated genes in response to developmental and stress-induced senescence signals. Functions in salt and oxidative stress-responsive signaling pathways. Binds to the promoter of NAC029/NAP and NAC059/ORS1 genes (PubMed:23926065).

3702:AT5G03470
gene id: 3702:AT5G03470
uniprot id: A0A178UNX1
uniprot id: O04375
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B56 family.
messages: Belongs to the phosphatase 2A regulatory subunit.
messages: Cytoplasm
messages: Expressed ubiquitously, higher levels in leaves.
messages: Nucleus
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (Probable). Interacts with BZR1 (PubMed:21258370). Interacts with BRI1 (PubMed:26517938). Interacts with SRK2E/OST1 (PubMed:26175513).
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment (By similarity). Required for the formation of the PP2A holoenzyme that positively regulates brassinosteroid signaling by dephosphorylating and activating BZR1 (PubMed:21258370).
messages: The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

3702:AT1G14470
gene id: 3702:AT1G14470
uniprot id: A0A178WJC6
uniprot id: Q9M9R6
names: Caution
names: Similarity
messages: Belongs to the PPR family. PCMP-A subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G20000
gene id: 3702:AT1G20000
uniprot id: A0A5S9V6U7
uniprot id: F4HR03
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAF11 family.
messages: Component of the TFIID complex. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa.
messages: Expressed in roots, leaves and inflorescences.
messages: Nucleus
messages: TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription.

3702:AT3G03773
gene id: 3702:AT3G03773
uniprot id: A0A178VFM3
uniprot id: F4J2B8
uniprot id: Q6ID70
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a co-chaperone for HSP90 (PubMed:20349287). Controls root development through the modulation of auxin distribution in the root meristem (PubMed:26163704).
messages: Acts as a co-chaperone for HSP90.
messages: Belongs to the p23/wos2 family.
messages: Cytoplasm
messages: Inhibited by heat shock treatment.
messages: Interacts with HSP90 in an ATP-dependent manner.
messages: Nucleus
messages: Phosphorylated by casein kinase 2 in vitro.
messages: Short root length. Impaired cell division in the root meristem.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Widely expressed but preferentially in the root meristem.

3702:AT1G26340
gene id: 3702:AT1G26340
uniprot id: A0A178WMK3
uniprot id: Q9FDW8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b5 family.
messages: Interacts with BI-1, FAH1 and FAH2.
messages: Mitochondrion membrane
messages: chloroplast membrane

3702:AT5G57630
gene id: 3702:AT5G57630
uniprot id: A0A178UR90
uniprot id: A0A1P8BBK1
uniprot id: A0A384LAE1
uniprot id: A0A5S9YHA7
uniprot id: Q94CG0
names: Caution
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: Interacts with CBL9.
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G41520
gene id: 3702:AT2G41520
uniprot id: A0A178VZX6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G59850
gene id: 3702:AT5G59850
uniprot id: A0A178W5N5
uniprot id: A0A384KNV6
uniprot id: P42798
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS8 family.
messages: Cytoplasm

3702:AT1G48900
gene id: 3702:AT1G48900
uniprot id: A0A178WMZ2
uniprot id: A8MSA9
uniprot id: P49967
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein).
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes.
messages: Cytoplasm
messages: Has a two domain structure: the G-domain binds GTP; the M-domain binds the 7S RNA in presence of SRP19 and also binds the signal sequence.
messages: Signal recognition particle consists of a 7S RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.

3702:AT3G11460
gene id: 3702:AT3G11460
uniprot id: Q9CAY1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Interacts with MORF8/RIP1.
messages: Involved in C-to-U editing of mitochondrial RNA. Required specifically for editing the mitochondrial NAD2 transcript.
messages: Mitochondrion

3702:AT3G24280
gene id: 3702:AT3G24280
uniprot id: Q1ECS0
names: Caution
names: Function
names: Tissue Specificity
messages: Expressed in siliques and anthers.
messages: It is uncertain whether Met-1 or Met-10 is the initiator.
messages: Mediates responses to the synthetic auxin 2,4-dichlorophenoxyacetic acid (2,4-D). Not involved in the response to indole-3-acetic acid (IAA). May interact with RUB modification-related components and may regulate the culling-ring ubiquitin E3 ligase complex (CRL) activity.

3702:AT1G67470
gene id: 3702:AT1G67470
uniprot id: O64798
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Induced by elevated temperature (e.g. at 25 degrees Celsius).
messages: Slightly shortened inflorescence stem when grown at 25 degrees Celsius (PubMed:28499073). The double mutant zed1-6 zrk12-1 exhibits short inflorescence stem and autoimmunity symptoms when grown at 25 degrees Celsius (PubMed:28499073).
messages: The protein kinase domain is predicted to be catalytically inactive.
messages: Together with RPP13L4/ZAR1, involved in the regulation of the ambient temperature-sensitive intersection of growth and immune response in the absence of pathogens.

3702:AT5G18220
gene id: 3702:AT5G18220
uniprot id: A0A178UBT7
uniprot id: Q9FK49
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT1G36370
gene id: 3702:AT1G36370
uniprot id: A0A178WMF6
uniprot id: Q84WV0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the interconversion of serine and glycine.
messages: Cytoplasm
messages: Homotetramer.
messages: Interconversion of serine and glycine.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G80510
gene id: 3702:AT1G80510
uniprot id: Q9M8L9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.6) subfamily.
messages: Endoplasmic reticulum membrane
messages: Vacuole membrane

3702:AT3G61130
gene id: 3702:AT3G61130
uniprot id: A0A5S9XMN9
uniprot id: Q9LE59
uniprot id: W8PUP8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 8 family.
messages: Expressed in seedlings, inflorescences, flowers, siliques, pollen, roots, stems and leaves.
messages: Golgi apparatus membrane
messages: Involved in pectin biosynthesis. Catalyzes the transfer of galacturonic acid from uridine 5'-diphosphogalacturonic acid onto the pectic polysaccharide homogalacturonan.

3702:AT3G05000
gene id: 3702:AT3G05000
uniprot id: Q9CAW4
names: Similarity
messages: Belongs to the TRAPP small subunits family. BET3 subfamily.

3702:AT3G16490
gene id: 3702:AT3G16490
uniprot id: A0A654F9F2
uniprot id: Q9LK76
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
messages: cytoskeleton

3702:AT4G18197
gene id: 3702:AT4G18197
uniprot id: A0A178UX10
uniprot id: Q2V3H2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane
messages: The function in peroxisome biogenesis is dubious.

3702:AT1G30240
gene id: 3702:AT1G30240
uniprot id: A8MQA6
uniprot id: Q0WV78
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RIX1/PELP1 family.
messages: Nucleus

3702:AT5G65980
gene id: 3702:AT5G65980
uniprot id: A0A178U6H8
uniprot id: A0A1P8BD12
uniprot id: Q9FKY4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the auxin efflux carrier (TC 2.A.69.2) family.
messages: Endoplasmic reticulum membrane
messages: Expressed in seedlings, rosette and cauline leaves, stems and flowers.
messages: Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.
messages: Membrane
messages: Up-regulated by auxin application.

3702:AT4G23900
gene id: 3702:AT4G23900
uniprot id: A0A384KE66
uniprot id: Q1ECR6
uniprot id: Q8LAH8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDK family.
messages: Homohexamer.
messages: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. Shows the highest specificity towards GDP (By similarity).
messages: Mitochondrion intermembrane space
messages: chloroplast thylakoid lumen

3702:AT4G13810
gene id: 3702:AT4G13810
uniprot id: A0A1P8B683
uniprot id: F4JTT5
uniprot id: Q9SVN2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.

3702:AT1G23320
gene id: 3702:AT1G23320
uniprot id: A0A5S9VPJ6
uniprot id: Q9LR29
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the alliinase family.
messages: Cytoplasm
messages: Inhibited by L-kynurenine.
messages: No visible phenotype.
messages: Probably involved in auxin production. TAA1, TAR1 and TAR2 are required for proper embryo patterning.
messages: Slightly up-regulated by ethylene.
messages: Very low expression in seedlings.

3702:AT1G76930
gene id: 3702:AT1G76930
uniprot id: Q38913
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the extensin family.
messages: By wounding, water and cold stresses; in response to plant hormones 2,4-D, BAP, GA3, SA, MeJA and ABA treatment; in response to L-Ser, Hyp and L-Pro treatment.
messages: Early expressed in the whole plant. Detected in the leaves of 2 and 4 weeks old rosettes, but not in 6-weeks-old rosettes. Detected specifically in roots from the mature plant (6-weeks old).
messages: Extensins contain a characteristic repeat of the pentapeptide Ser-Pro(4). For this particular extensin, a typical repeat of Ser-Pro(3) is found. In both cases, the proline residues are hydroxylated and then O-glycosylated (arabinosylation).
messages: In cv. Landsberg erecta, absence of several repeats.
messages: Predominantly expressed in the roots. Not detected in the leaves, nor in flowers or flower buds. Wounding reverses this pattern, turning on the gene in the leaves and repressing it in the roots.
messages: Structural component which strengthens the primary cell wall.
messages: Synthetised as soluble proteins which become insolubilised in the cell wall through the intermolecular cross-linking of Tyr on adjacent monomers. Isodityrosine (IDT) stabilizes and makes rigid the part of the polypeptide where IDT functional sites are present.
messages: primary cell wall

3702:AT4G35380
gene id: 3702:AT4G35380
uniprot id: A0A1P8B4J7
uniprot id: A0A654FVS1
uniprot id: F4JN05
names: Activity Regulation
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting (By similarity).
messages: Homodimer.
messages: Inhibited by brefeldin A.
messages: Membrane
messages: cytosol

3702:AT1G03160
gene id: 3702:AT1G03160
uniprot id: Q1KPV0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. Mitofusin subfamily.
messages: Pale green leaves phenotype and delayed flowering (PubMed:16617119). Decreased number of chloroplasts and heterogeneity in size in mature mesophyll cells (PubMed:16617119, PubMed:23963675). Abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids (PubMed:16617119). Lesion mimic phenotype with activation of defense response markers in the ecotype Landsberg erecta (PubMed:23963675).
messages: Probable membrane-remodeling GTPase that plays a unique role in the in the determination of thylakoid and chloroplast morphology and regulates organization of the thylakoid network. Not involved in the determination of mitochondrial morphology or ultrastructure.
messages: chloroplast inner membrane
messages: chloroplast thylakoid membrane

3702:AT3G53110
gene id: 3702:AT3G53110
uniprot id: Q93ZG7
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: ATP-dependent RNA helicase essential for mRNA export from the nucleus. Plays an important role in the positive regulation of CBF/DREB transcription factors.
messages: Belongs to the DEAD box helicase family. DDX19/DBP5 subfamily.
messages: By abscisic acid (ABA).
messages: Constitutively expressed.
messages: Cytoplasm
messages: Interacts with NUP214 (via N-terminus).
messages: Nucleus
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT4G22670
gene id: 3702:AT4G22670
uniprot id: Q93YR3
names: Similarity
messages: Belongs to the FAM10 family.

3702:AT4G11393
gene id: 3702:AT4G11393
uniprot id: Q2V3J6
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G64840
gene id: 3702:AT5G64840
uniprot id: Q9LV93
names: Similarity
messages: Belongs to the ABC transporter superfamily. ABCF family. EF3 (TC 3.A.1.121) subfamily.

3702:AT1G43700
gene id: 3702:AT1G43700
uniprot id: Q9MA75
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Cytoplasm
messages: Enhanced low sulfur tolerance with higher rate of sulfate uptake at low sulfate levels. Improved tolerance to heavy metal (e.g. CdCl(2)) and oxidative stress (e.g. paraquat).
messages: Forms homomultimers. Interacts with Agrobacterium tumefaciens VirE2 and mediates its translocation to the host nucleus. Binds to VIP2. Forms a complex made of Agrobacterium VirE2, VIP1, VIP2 and single-stranded DNA (ssDNA). The interaction with KAP1 mediates its nuclear import. Binds to the H2A histone RAT5. Interacts with MPK3 and Agrobacterium virF. Forms a complex made of VIP1, VBF and Agrobacterium virE2. Interacts with SCF(VBF) E3 ubiquitin ligase complex. Binds directly to VBF. Forms heterodimers with BZIP34 and BZIP61.
messages: Mostly expressed in dividing cells, present in leaves, roots and seedlings.
messages: Nucleus
messages: Phosphorylated by MPK3. This phosphorylation promotes nuclear localization.
messages: Transcription activator that binds specifically to the VIP1 response elements (VREs) DNA sequence 5'-ACNGCT-3' found in some stress genes (e.g. TRX8 and MYB44), when phosphorylated/activated by MPK3. Required for Agrobacterium VirE2 nuclear import and tumorigenicity. Promotes transient expression of T-DNA in early stages by interacting with VirE2 in complex with the T-DNA and facilitating its translocation to the nucleus, and mediates stable genetic transformation by Agrobacterium by binding H2A histone. Prevents cell differentiation and shoot formation. Limits sulfate utilization efficiency (SUE) and sulfate uptake, especially in low-sulfur conditions (PubMed:11432846, PubMed:12124400, PubMed:15108305, PubMed:15824315, PubMed:17947581, PubMed:19820165, PubMed:20547563). Plays a role in osmosensory response by binding to the 5'-AGCTGT/G-3' DNA sequence found in the promoters of the hypoosmolarity-responsive genes CYP707A1 and CYP707A3 (PubMed:25093810, PubMed:22452852). Involved in the negative regulation of touch-induced root bending and salt-dependent root bending (PubMed:27208231, PubMed:30010769, PubMed:31504762).
messages: Transcriptionally activated during the acquisition of pluripotentiality (in protoplasts) by pericentromeric chromatin decondensation and DNA demethylation. Targeted to degradation by the proteasome by VBF and Agrobacterium virF in SCF(VBF) and SCF(virF) E3 ubiquitin ligase complexes after mediating T-DNA translocation to the nucleus.

3702:AT4G09720
gene id: 3702:AT4G09720
uniprot id: A0A178UUR6
uniprot id: Q948K8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G58050
gene id: 3702:AT5G58050
uniprot id: Q9FGT9
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: Expressed in flowers and siliques.
messages: Membrane

3702:AT1G48020
gene id: 3702:AT1G48020
uniprot id: Q9LNF2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Highest expression in flowers (PubMed:14675772, PubMed:14741367, PubMed:17971035). Expressed exclusively at the pollen tube tip (PubMed:14675772, PubMed:17971035).
messages: Inhibits pectin methylesterase (PME) from flowers and siliques (PubMed:14675772). Inhibits PME from leaves (PubMed:14741367).
messages: Monomer and homodimer. Interacts in vitro with PPME1.
messages: The N-terminal alpha-hairpin extension is required for pectinmethylesterase inhibitor activity.
messages: apoplast

3702:AT4G27830
gene id: 3702:AT4G27830
uniprot id: A0A1P8B4J5
uniprot id: A0A5S9XWH3
uniprot id: Q93ZI4
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT5G18940
gene id: 3702:AT5G18940
uniprot id: A0A178UE06
uniprot id: Q3E9D4
uniprot id: Q8L9L9
names: Similarity
messages: Belongs to the Mo25 family.

3702:AT3G24670
gene id: 3702:AT3G24670
uniprot id: A0A178VLR8
uniprot id: Q9LJ42
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT2G24615
gene id: 3702:AT2G24615
uniprot id: Q2V462
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G62910
gene id: 3702:AT3G62910
uniprot id: A0A178VJK1
uniprot id: Q8RX79
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Albino and pale green (apg) phenotype and early seedling growth arrest.
messages: Belongs to the prokaryotic/mitochondrial release factor family.
messages: By light.
messages: Expressed in roots, leaves and stems.
messages: May direct the termination of translation in response to the peptide chain termination codon UAG. Required for normal chloroplast development and plays essential roles in the termination of translation in plastids.
messages: chloroplast

3702:AT3G12360
gene id: 3702:AT3G12360
uniprot id: A0A178V8T3
uniprot id: A0A384LMN5
uniprot id: A0A654F7H2
uniprot id: Q9C7A2
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt and drought stresses.
messages: Cell membrane
messages: Expressed in roots, shoots, leaf vasculature and stems.
messages: Interacts with REM19/RTV1.
messages: Involved in salt stress tolerance. May act through abscisic acid (ABA) signaling pathways and promote reactive oxygen species (ROS) production.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant seedlings show increased salt-stress tolerance.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G49270
gene id: 3702:AT5G49270
uniprot id: A0A384L0N7
uniprot id: Q0WRJ1
uniprot id: Q9FJ13
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the COBRA family.
messages: Cell membrane
messages: Expressed only in flowers.

3702:AT1G77740
gene id: 3702:AT1G77740
uniprot id: Q8L796
names: Activity Regulation
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Activated by binding to RABE1D.
messages: Cell membrane
messages: Interacts with RABE1A, TUFA, RABE1C, RABE1D and RABE1E.
messages: May be due to intron retention.
messages: Plants overexpressing PI5K2 exhibit severe dwarfism and are enriched in the plasma membrane of the root meristem.
messages: Possesses phosphatidylinositol (PtdIns) phosphate kinase activity (Probable). Phosphorylates PtdIns(4)P and PtdIns(3)P in vitro (PubMed:19903693). Doesn't phosphorylate PtdIns(5)P nor PtdIns(3,4)P2 in vitro (PubMed:19903693). Does not exhibit phosphatidylinositol kinase activity in vitro (PubMed:19903693).

3702:AT4G09820
gene id: 3702:AT4G09820
uniprot id: Q9FT81
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bHLH protein family.
messages: Buds, flowers and developing siliques, but not in leaves, stems and roots.
messages: Faint expression in buds and flowers. Increases during the very early stages of seed development, reaches a maximum at the globular embryo stage and stays high throughout seed formation.
messages: Homodimer (Probable). Interacts with MYB4, MYB5, MYB6, MYB82, MYB113, MYB114, MYB75/PAP1, MYB90/PAP2, and TT2.
messages: Nucleus
messages: TT8 might interact with TT2 and TTG1 to modulate the late genes of the flavonoid pathway.
messages: Transcription activator, when associated with MYB75/PAP1 or MYB90/PAP2. Involved in the control of flavonoid pigmentation. Plays a key role in regulating leucoanthocyanidin reductase (BANYULS) and dihydroflavonol-4-reductase (DFR). Not required for leucoanthocyanidin dioxygenase (LDOX) expression.

3702:AT2G01200
gene id: 3702:AT2G01200
uniprot id: Q8RYC6
names: Caution
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.
messages: Was originally (Ref.6) erroneously named IAA31.

3702:AT1G55930
gene id: 3702:AT1G55930
uniprot id: A0A1P8AR56
uniprot id: A0A654EIW3
uniprot id: Q84R21
names: Subcellular Location Annotation
messages: Membrane
messages: chloroplast membrane

3702:AT5G25620
gene id: 3702:AT5G25620
uniprot id: F4JY69
uniprot id: Q8VZ59
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FMO family.
messages: Cytoplasm
messages: Down-regulated by heat stress. Negatively regulated by SPL.
messages: Highly expressed in roots but modestly expressed in the cauline leaves and flowers. Expressed in anthers.
messages: Involved in auxin biosynthesis via the indole-3-pyruvic acid (IPA) pathway. Also able to convert in vitro phenyl pyruvate (PPA) to phenyl acetic acid (PAA). Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots.
messages: No visible phenotype, due to the redundancy with the other members of the YUCCA family.

3702:AT3G04470
gene id: 3702:AT3G04470
uniprot id: A0A384KM82
uniprot id: Q9M840
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G03450
gene id: 3702:AT2G03450
uniprot id: A0A178VVI9
uniprot id: Q9ZQ81
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G20180
gene id: 3702:AT1G20180
uniprot id: A0A178W669
uniprot id: Q6DYE5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0496 family.
messages: Membrane

3702:AT2G27880
gene id: 3702:AT2G27880
uniprot id: Q9SJK3
names: Function
names: Similarity
messages: Belongs to the argonaute family. Ago subfamily.
messages: Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Main component of the RNA-induced silencing complex (RISC) that binds to a short guide RNA such as a microRNA (miRNA) or small interfering RNA (siRNA). RISC uses the mature miRNA or siRNA as a guide for slicer-directed cleavage of homologous mRNAs to repress gene expression. Associates with siRNAs of various sizes, from 21-24 nucleotide in length and preferentially recruits small RNAs with a 5' terminal cytosine. Probably involved in antiviral RNA silencing. Associates with siRNAs derived from cucumber mosaic virus (CMV). Targeted by the turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO5 function in RNA silencing.

3702:AT1G49880
gene id: 3702:AT1G49880
uniprot id: Q8GXX0
names: Disruption Phenotype
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Contains three disulfide bonds; one catalytic disulfide (Cys-119 to Cys-122), one structural disulfide (Cys-148 to Cys-165), and one shuttle disulfide (Cys-177 to Cys-182).
messages: Embryonic lethality when homozygous.
messages: FAD-dependent sulfhydryl oxidase that catalyzes disulfide bond formation (PubMed:14996837, PubMed:16893552). Oxidizes thioredoxin in vitro (PubMed:14996837, PubMed:16893552). Required for the import and folding of small cysteine-containing proteins in the mitochondrial intermembrane space. Forms a redox cycle with MIA40 that involves a disulfide relay system. Important for maintaining the cysteine residues in MIA40 in an oxidized state (By similarity).
messages: Homodimer.
messages: Mitochondrion

3702:AT1G05140
gene id: 3702:AT1G05140
uniprot id: O23053
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M50A family.
messages: Metalloprotease essential for chloroplast and plant development. May be involved in regulated intramembrane proteolysis (RIP).
messages: No visible phenotype.
messages: chloroplast inner membrane

3702:AT5G45390
gene id: 3702:AT5G45390
uniprot id: A0A654G8S4
uniprot id: Q94B60
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase S14 family.
messages: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Essential protein required for chloroplast development and integrity (PubMed:16705403, PubMed:17241447). Essential for Embryogenesis (PubMed:23548781).
messages: Component of the chloroplastic Clp protease core complex which consist of at least 16 proteins: CLPP4 (3 copies), CLPP5 (3 copies), CLPR4 (2 copies), ClpP1 (1 copy), CLPP6 (1 copy), CLPR2 (1 copy), CLPT1 (1 copy), CLPT2 (1 copy) and 3 copies of CLPP3 and/or CLPR1 and/or CLPR3 (PubMed:11278690, PubMed:14593120, PubMed:16766689, PubMed:16980539). Interacts with CHIP (PubMed:17241447). The core complex is organized in two heptameric rings, one containing CLPP3,4,5,6 in a 1:2:3:1 ratio and the other CLPP1 and CLPR1,2,3,4 in a 3:1:1:1:1 ratio (PubMed:21712416).
messages: Embryo lethal when homozygous.
messages: Mostly expressed in leaves. Also detected in stems, and to a lower extent, in roots (at protein level).
messages: Repressed in darkness. Levels decrease in leaves during aging (at protein level). Slightly and transiently repressed by high light stress (at protein level).
messages: Ubiquitinated by CHIP.
messages: chloroplast stroma

3702:AT1G04850
gene id: 3702:AT1G04850
uniprot id: A0A178W2G7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G38450
gene id: 3702:AT5G38450
uniprot id: Q9FF18
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By trans-zeatin and isopentenyladenine in roots. Down-regulated by auxin and abscisic acid in roots.
messages: Cytokinin hydroxylase that catalyzes the biosynthesis of trans-zeatin via the isopentenyladenine riboside 5'-monophosphate (iPRMP)-dependent pathway. Can use isopentenyladenosine-5'-monophosphate, isopentenyladenosine-5'-diphosphate and isopentenyladenosine-5'-triphosphate as substrate.
messages: Expressed in roots and flowers.
messages: Membrane
messages: Sequencing errors.

3702:AT3G06120
gene id: 3702:AT3G06120
uniprot id: A0A178VCY0
uniprot id: Q9M8K6
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By UV, flagellin, and jasmonic acid (JA) treatments.
messages: Homodimer.
messages: Leaf epidermis and flowers.
messages: Nucleus
messages: Strongly expressed in meristemoids and at lower levels in guard mother cells (GMCs) and guard cells.
messages: Transcription factor. Together with FMA and SPCH, regulates the stomata formation. Required for the differentiation of stomatal guard cells, by promoting successive asymmetric cell divisions and the formation of guard mother cells. Promotes the conversion of the leaf epidermis into stomata.

3702:AT2G32390
gene id: 3702:AT2G32390
uniprot id: A0A1P8AYR0
uniprot id: A0A1P8AYW8
uniprot id: F4ITQ0
uniprot id: F4ITQ2
uniprot id: Q9SW97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots. Also detected in shoots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane

3702:AT2G47240
gene id: 3702:AT2G47240
uniprot id: A0A1P8B2B8
uniprot id: O22898
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Acts in both the wax and cutin pathways. Preferentially uses palmitate, palmitoleate, linoleate and eicosenoate. Seems to have a specific activity against very long-chain fatty acid (VLCFA) class with acids longer than 24 carbons (C(24)).
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.
messages: Endoplasmic reticulum
messages: Epidermal-specific expression along the entire stem. In cauline leaves, was expressed over the entire leaf surface, most strongly in trichomes and guard cells, but not in mesophyll cells. In flowers, the expression was detected in the stigma and filaments of the stamens, and in the carpel was expressed specifically in ovaries. In roots, was expressed in primary and lateral roots, but not in the root tips.
messages: In stem, fewer and flatter wax crystals and disorganized cuticle proper and thinner cuticular layer. Reduced amount of wax in all chemical classes on the stem and leaf, except in the very long-chain fatty acid (VLCFA) class with acids longer than 24 carbons (C(24)).

3702:AT1G68920
gene id: 3702:AT1G68920
uniprot id: C0Z2X3
uniprot id: Q9CAA9
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, stems, and flowers.
messages: Homodimer (Probable). Interacts with IBH1.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Plants over-expressing BHLH49 show increased hypocotyl and cotyledon lengths and increased flower size.
messages: Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif.

3702:AT1G08650
gene id: 3702:AT1G08650
uniprot id: A0A5S9TB23
uniprot id: F4HXN6
uniprot id: Q9SPK4
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Calcium-independent kinase involved in light-dependent phosphoenolpyruvate carboxylase phosphorylation.
messages: Constitutively active and not activated by phosphorylation.
messages: Expressed in rosette leaves, and to lower levels in flowers and roots. Barely detectable in siliques, cauline leaves and stems.
messages: Lacks the autoinhibitory region and EF hands found in calcium-dependent protein kinases.
messages: Retarded growth and loss of light-induced phosphoenolpyruvate carboxylase phosphorylation, but little or no effect on the metabolic flux through the anaplerotic pathway.
messages: Up-regulated by light, cycloheximide, phosphate starvation, carbon availability and high pH. Down-regulated by phosphate and phosphite. Not under circadian control and not affected by nitrogen supply.

3702:AT1G69485
gene id: 3702:AT1G69485
uniprot id: Q5Q0D8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

3702:AT5G39800
gene id: 3702:AT5G39800
uniprot id: A0A654G6M0
uniprot id: Q8GXS6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mL41 family.
messages: Mitochondrion

3702:AT4G25820
gene id: 3702:AT4G25820
uniprot id: A0A178UTG4
uniprot id: Q9ZSU4
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Has some preference for non-fucosylated xyloglucan polymer. No apparent XEH activity in vitro.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Down-regulated by aluminum.
messages: N-glycosylated; not essential for its enzymatic activity.
messages: Root specific.
messages: apoplast
messages: cell wall

3702:AT1G26730
gene id: 3702:AT1G26730
uniprot id: A0A178W8P9
uniprot id: A0A1P8ASQ2
uniprot id: Q6R8G3
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SYG1 (TC 2.A.94) family.
messages: Cell membrane
messages: Expressed in root tips, vascular cylinders of roots and filaments, leaf hydathodes, stem, receptacle and stigma apex.
messages: May transport inorganic phosphate (Pi).
messages: Membrane
messages: Not induced by Pi deficiency.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G58960
gene id: 3702:AT5G58960
uniprot id: F4KGE8
names: Disruption Phenotype
names: Function
messages: Maintenance of negative gravitropic hypocotyls grow after exposure of seedlings to red (R) or far red (FR) light. Reduced seedlings viability.
messages: Required for red (R) and far red (FR) light-induced and phytochrome-mediated deregulation of negative gravitropism leading to randomization of hypocotyl growth orientation.

3702:AT4G34260
gene id: 3702:AT4G34260
uniprot id: Q8L7W8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 95 family.
messages: Hydrolyzes alpha-1,2-linked fucose. Also active on fucosylated xyloglucan oligosaccharides. No activity with 3-fucosyllactose, p-nitrophenyl-alpha-I-fucopyranoside, lacto-N-fucopentaose II, lacto-N-fucopentaose III or alpha 1,6-fucosylated chitopentaose. Involved in apoplastic xyloglucan metabolism.
messages: No visible phenotype. Higher abundance of fucosylated oligosaccharides and presence of unusual oligosaccharides.
messages: Ubiquitous. Highest expression in vascular tissues, leaf trichomes, root elongation zone and emerging lateral roots.
messages: apoplast

3702:AT5G06250
gene id: 3702:AT5G06250
uniprot id: A0A384LF59
uniprot id: Q9FNI3
names: Caution
names: Miscellaneous
names: Subcellular Location Annotation
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G25170
gene id: 3702:AT3G25170
uniprot id: A0A654FBG2
uniprot id: Q0V822
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT1G52180
gene id: 3702:AT1G52180
uniprot id: Q9M818
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Membrane

3702:AT4G18020
gene id: 3702:AT4G18020
uniprot id: Q6LA43
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ARR-like family.
messages: Binds the target DNA as a monomer.
messages: Lacks the phospho-accepting Asp (here Glu-76), present in the receiver domain, which is one of the conserved features of the two-component response regulators (ARRs) family.
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'.

3702:AT5G11720
gene id: 3702:AT5G11720
uniprot id: A0A654G0A6
uniprot id: Q9LYF8
names: Similarity
messages: Belongs to the glycosyl hydrolase 31 family.

3702:AT4G29890
gene id: 3702:AT4G29890
uniprot id: Q9SZR0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the choline monooxygenase family.
messages: Binds 1 Fe cation.
messages: Binds 1 [2Fe-2S] cluster.
messages: Catalyzes the first step of the osmoprotectant glycine betaine synthesis.
messages: chloroplast stroma

3702:AT2G36320
gene id: 3702:AT2G36320
uniprot id: A0A654F9Z5
uniprot id: Q9SJM6
names: Function
messages: May be involved in environmental stress response.

3702:AT2G47140
gene id: 3702:AT2G47140
uniprot id: Q94K41
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT3G62930
gene id: 3702:AT3G62930
uniprot id: A0A178V922
uniprot id: Q9LYC8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.

3702:AT3G10960
gene id: 3702:AT3G10960
uniprot id: A0A178VPT2
uniprot id: Q9SRK7
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.
messages: Membrane
messages: Resistance to 8-azaadenine and 8-azaguanine but not to other toxic nucleobase analogs. Deficiency in the uptake of adenine and guanine.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transports natural purines (adenine and guanine) as well as purine analogs. Confers sensitivity to 8-azaadenine and 8-azaguanine (8-azg).

3702:AT3G42473
gene id: 3702:AT3G42473
uniprot id: P82762
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: Sequencing errors.

3702:AT1G78620
gene id: 3702:AT1G78620
uniprot id: A0A178W477
uniprot id: F4IBS8
uniprot id: Q9SYM0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM19 family.
messages: Lethal when homozygous. Tocopherol-deficient plants are unable to grow photoautotrophically and infertile. Vte5 and vte6 double mutants can grow photoautotrophically and display a stay-green phenotype with strongly delayed senescence and an extended lifetime.
messages: Membrane
messages: Overexpression of VTE6 results in increased phytyl-PP and tocopherol levels in seeds.
messages: Phytyl-phosphate kinase catalyzing the conversion of phytyl-monophosphate to phytyl-diphosphate (PubMed:26452599). Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol (vitamin E) biosynthesis (PubMed:26452599). Involved in the biosynthesis of phylloquinone (vitamin K), which is required for the photosystem I (PSI) complex stability (PubMed:28007557).
messages: chloroplast membrane

3702:AT5G46600
gene id: 3702:AT5G46600
uniprot id: A0A5S9YBK2
uniprot id: Q9LS23
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Malate transporter.
messages: Membrane

3702:AT1G28440
gene id: 3702:AT1G28440
uniprot id: A0A5S9W9N5
uniprot id: Q9SGP2
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Decreased expression shortly before the onset of abscission.

3702:AT5G26700
gene id: 3702:AT5G26700
uniprot id: O65252
uniprot id: Q541W3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT5G51000
gene id: 3702:AT5G51000
uniprot id: A0A178UFB8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G43590
gene id: 3702:AT2G43590
uniprot id: A0A654F2Y0
uniprot id: O24658
names: Caution
names: Similarity
messages: Belongs to the glycosyl hydrolase 19 family. Chitinase class I subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT2G46800
gene id: 3702:AT2G46800
uniprot id: A0A384KM83
uniprot id: Q0WW73
uniprot id: Q9ZT63
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
messages: By treatment with high concentrations of zinc.
messages: Mediates zinc accumulation in roots and confers resistance to zinc. Involved in sequestration of excess zinc in the cytoplasm into vacuoles to maintain zinc homeostasis. Can also transport cadmium with a low efficiency.
messages: Membrane
messages: No visible phenotype under normal growth condition, but hypersensitivity to elevated levels of zinc.
messages: Ubiquitously expressed at low levels.
messages: Vacuole membrane

3702:AT2G41760
gene id: 3702:AT2G41760
uniprot id: O22944
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NTAQ1 family.
messages: Mediates the side-chain deamidation of N-terminal glutamine residues to glutamate, an important step in N-end rule pathway of protein degradation (PubMed:30117535). Conversion of the resulting N-terminal glutamine to glutamate renders the protein susceptible to arginylation, polyubiquitination and degradation as specified by the N-end rule (PubMed:30117535). Does not act on substrates with internal or C-terminal glutamine and does not act on non-glutamine residues in any position (PubMed:30117535). Involved in immune response (PubMed:30117535). Controls the expression of specific defense-response genes, activates the synthesis pathway for the phytoalexin camalexin, and influences basal resistance to the hemibiotroph pathogen Pseudomonas syringae pv tomato (Pst) (PubMed:30117535).
messages: Monomer.

3702:AT1G35560
gene id: 3702:AT1G35560
uniprot id: A0A654EKM9
uniprot id: Q9LQF0
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with SPL.
messages: Nucleus

3702:AT5G43790
gene id: 3702:AT5G43790
uniprot id: A0A178UL77
uniprot id: Q9FG85
names: Caution
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G24170
gene id: 3702:AT1G24170
uniprot id: A0A384KCK3
uniprot id: O48684
uniprot id: W8PW12
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.

3702:AT4G26590
gene id: 3702:AT4G26590
uniprot id: Q9SUA4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.
messages: Expressed predominantly in flowers, and at a very low level in leaves and roots.
messages: Involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner.
messages: Membrane

3702:AT1G11530
gene id: 3702:AT1G11530
uniprot id: Q8LDI5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thioredoxin family.
messages: Cytoplasm
messages: Lacks the conserved cysteine (here Ser-39), present in the redox-active center, which is one of the conserved features of the thioredoxin family.
messages: Possesses low disulfide reductase activity, but efficient protein disulfide isomerase activity. Does not possess deglutathionylation activity.
messages: Ubiquitous.

3702:AT3G26500
gene id: 3702:AT3G26500
uniprot id: A0A178VDK6
uniprot id: Q9LRV8
names: Caution
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the SHOC2 family.
messages: Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Widely expressed but preferentially in roots.

3702:AT1G54220
gene id: 3702:AT1G54220
uniprot id: A0A178W5Y1
uniprot id: Q5M729
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Mitochondrion
messages: Mitochondrion matrix
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).

3702:AT5G65630
gene id: 3702:AT5G65630
uniprot id: Q7Y214
names: Domain
names: Subcellular Location Annotation
messages: Nucleus
messages: The NET domain could serve as an interface to localize different proteins or complexes to chromatin.

3702:AT2G46900
gene id: 3702:AT2G46900
uniprot id: A0A178VSX5
uniprot id: O80734
names: Similarity
messages: Belongs to the TCF25 family.

3702:AT1G65800
gene id: 3702:AT1G65800
uniprot id: A0A1P8AVI8
uniprot id: Q9S972
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in cotyledons, leaves and sepals.
messages: Interacts with PUB9, PUB13, PUB14 and PUB38.
messages: Involved in the regulation of cellular expansion and differentiation.

3702:AT5G13370
gene id: 3702:AT5G13370
uniprot id: Q8GZ29
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: Expressed in seedlings, roots, and parts of the siliques.
messages: Expressed widely in young seedling, including roots, shoots, and cotyledons. In older seedlings, present the primary root, shoots, and cotyledons, but not in the root epidermal cells or root hairs. Later observed in the cotyledons and the shoots, but not in the true leaves. In adult plants, accumulates in the primary root and lateral root tips and in the roots near the root/shoot junction. In mature siliques, confined to the tip of the silique in the style just below the stigma and at the base of the silique in the replum and abscission zone of siliques.
messages: Indole-3-acetic acid-amido (IAA) synthetase that catalyzes the conjugation of amino acids to auxin specifically using the auxin precursor indole-3-butyric acid (IBA) and glutamine and, possibly, cysteine as substrates (PubMed:29462792, PubMed:30315112). Displays high catalytic activity with the auxinic phenoxyalkanoic acid herbicides 4-(2,4-dichlorophenoxy)butyric acid (2,4-DB) and to some extent 2,4-dichlorophenoxylacetic acid (2,4-D) as substrates, thus confering resistance to herbicides (PubMed:30315112).
messages: No visible phenotype in normal conditions (PubMed:29462792). Slight reduction in root length when grown on media containing indole-3-butyric acid (IBA) (PubMed:29462792). Hypersensitivity to the auxinic phenoxyalkanoic acid herbicide 4-(2,4-dichlorophenoxy)butyric acid (2,4-DB) (PubMed:30315112).

3702:AT2G39320
gene id: 3702:AT2G39320
uniprot id: O80949
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C85 family.
messages: Could be the product of a pseudogene.
messages: Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation.
messages: Nucleus

3702:AT3G19380
gene id: 3702:AT3G19380
uniprot id: Q9LT79
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G68230
gene id: 3702:AT1G68230
uniprot id: A0A178WQE6
uniprot id: A2RVT6
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G17580
gene id: 3702:AT1G17580
uniprot id: A0A5S9UVU5
uniprot id: Q39160
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily.
messages: Cytoplasm
messages: Homodimer (PubMed:18429938). Interacts with MYOB1 and MYOB2 (PubMed:23995081). Interacts with PHOX1 (PubMed:28096376).
messages: IQ domain mediates interaction with calmodulin.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Contributes to the trafficking of Golgi stacks, mitochondria and peroxisomes. Required for development of pavement cells, trichomes, and stigmatic papillae.
messages: No visible phenotype.
messages: The tail domain is a globular cargo-binding domain.

3702:AT5G27570
gene id: 3702:AT5G27570
uniprot id: Q3E906
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat CDC20/Fizzy family.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
messages: Nucleus
messages: The APC/C is composed of at least 11 subunits that stay tightly associated throughout the cell cycle (By similarity). Binds to GIG1 and PYM. Part of the mitotic checkpoint complex (MCC); interacts with MAD2 and BUB1.

3702:AT4G39210
gene id: 3702:AT4G39210
uniprot id: A0A178US50
uniprot id: P55231
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by 3'phosphoglycerate, inhibited by orthophosphate. Allosteric regulation.
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Heterotetramer.
messages: Probably are expressed in roots, flowers and/or seeds.
messages: This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
messages: chloroplast

3702:AT5G08055
gene id: 3702:AT5G08055
uniprot id: Q2V392
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G42750
gene id: 3702:AT5G42750
uniprot id: Q9FMZ0
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: BRI1 is not required for BKI1 association with the plasma membrane, but the BRI1 kinase activity is necessary for the membrane release.
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in leaves, petioles, shoot apices, hypocotyls, roots and flowers.
messages: Interacts (via C-terminus) with BRI1 (via kinase domain).
messages: Negative regulator of brassinosteroid signaling. When associated to the membrane, limits the interaction of BRI1 with BAK1 by binding to the kinase-inactive form of BRI1.
messages: Phosphorylated on Tyr-211 in response to brassinosteroid perception, leading to its inactivation: once phosphorylated, displaced into the cytosol where it is inactive.
messages: The c-terminal part (253-337) is necessary and sufficient for the interaction with BRI1.

3702:AT3G16120
gene id: 3702:AT3G16120
uniprot id: A0A384KD02
uniprot id: Q9LW74
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dynein light chain family.
messages: cytoskeleton

3702:AT3G24010
gene id: 3702:AT3G24010
uniprot id: A0A178VK01
uniprot id: Q9LIQ6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ING family.
messages: Component of an histone acetyltransferase complex.
messages: Component of an histone acetyltransferase complex. Interacts with H3K4me3 and to a lesser extent with H3K4me2.
messages: Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
messages: Interacts with H3K4me3 and to a lesser extent with H3K4me2.
messages: Nucleus
messages: The PHD-type zinc finger mediates the binding to H3K4me3.
messages: Ubiquitously expressed.

3702:AT2G46430
gene id: 3702:AT2G46430
uniprot id: Q9SKD7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Probable cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT3G28670
gene id: 3702:AT3G28670
uniprot id: A0A1I9LSL4
uniprot id: A0A384K940
uniprot id: Q944S5
names: Similarity
messages: Belongs to the ODR-4 family.

3702:AT5G49820
gene id: 3702:AT5G49820
uniprot id: A0A178U6M3
uniprot id: Q93YU2
names: Function
names: Similarity
messages: Belongs to the RUS1 family.
messages: Required for normal embryo development.

3702:AT1G15990
gene id: 3702:AT1G15990
uniprot id: Q9S9N5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Putative cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT3G52500
gene id: 3702:AT3G52500
uniprot id: Q9SVD1
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G62490
gene id: 3702:AT1G62490
uniprot id: Q9SXE8
names: Similarity
messages: Belongs to the mTERF family.

3702:AT1G80290
gene id: 3702:AT1G80290
uniprot id: A0A0K1SBD7
uniprot id: A0A384LP15
uniprot id: Q9C975
names: Function
names: Similarity
messages: Belongs to the glycosyltransferase 64 family.
messages: Probable glycosyltransferase.

3702:AT1G10840
gene id: 3702:AT1G10840
uniprot id: A0A178WN13
uniprot id: Q9C5Z2
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the eIF-3 subunit H family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (Potential). Regulates translation initiation of specific 5' mRNAs harboring multiple upstream open reading frames (uORFs) in their 5' leader sequence (e.g. BETA-OHASE 2 and LHY) (PubMed:15548739, PubMed:17439654, PubMed:23524850).
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex. Interacts directly with TIF3A1, TIF3B1, TIF3C1, TIF3E1 and TIF3F1 (PubMed:15548739, PubMed:20444226). Associates with the CSN (COP9 signalosome) complex. Binds to CSN1, CSN7 and CSN8 (PubMed:15548739). Interacts with ATPK1 (PubMed:23524850).
messages: Cytoplasm
messages: In response to auxin (NAA), phosphorylated at Ser-178 by ATPK1 and binds to polysomes via TOR signaling. This phosphorylation is repressed by Torin-1.
messages: Mostly expressed in roots and flowers, and, to a lower extent, in leaves, stems and siliques.
messages: Pleiotropic growth defects throughout development including postembryonic growth retardation, and delayed shoot and root growth, flowering, and senescence. Lethal at 80 percent at the vegetative rosettes stage. Reduced fertility. Compromised translation efficiency of specific 5' mRNA leader sequences. Requires exogenous sugar to transit from seedling to vegetative development, but hypersensitive to elevated levels of exogenous sugars (e.g. sucrose, maltose and glucose). Enhanced sensitivity to abscisic acid (ABA) (PubMed:15548739). Impaired uORF-RNAs polysomal association (PubMed:23524850).

3702:AT2G37080
gene id: 3702:AT2G37080
uniprot id: A0A1P8AZ83
uniprot id: A0A654FA72
uniprot id: A0A7G2EDW2
uniprot id: Q9ZQC5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a scaffold, mediating interaction of ROPs with different proteins.
messages: Belongs to the ICR family.
messages: Due to the probable chloroplastic localization, the interactions with ROPs are questionable.
messages: Interacts with ARAC8, ARAC11 and KIN13A in vitro, but not with ICR1 or SEC3A.
messages: chloroplast

3702:AT4G11510
gene id: 3702:AT4G11510
uniprot id: Q9LDU1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT3G22050
gene id: 3702:AT3G22050
uniprot id: Q9LRK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G60190
gene id: 3702:AT1G60190
uniprot id: O80742
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT5G50970
gene id: 3702:AT5G50970
uniprot id: A0A178UJ71
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G10020
gene id: 3702:AT5G10020
uniprot id: Q0WR59
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT5G39410
gene id: 3702:AT5G39410
uniprot id: Q8LGI2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the saccharopine dehydrogenase family.
messages: Mitochondrion membrane

3702:AT1G75060
gene id: 3702:AT1G75060
uniprot id: A0A178W4M5
uniprot id: A0A178W4P3
uniprot id: A8MR31
uniprot id: Q9C9Q1
names: Caution
names: Similarity
messages: Belongs to the SAP30 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G01950
gene id: 3702:AT2G01950
uniprot id: C0LGJ7
uniprot id: Q9ZPS9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Contains two pairs of conservatively spaced Cys (Cys pair 1 and 2) possibly involved in forming some heterodimers.
messages: Expressed in provascular and procambial sites throughout plant development. Expressed throughout globe- to heart-staged embryos. Then, it is restricted to procambial cells by the late torpedo stage, and this pattern persists throughout the duration of embryo development. After germination, it is expressed not only in procambial cells throughout the plant but also in all lateral organ primordia before the onset of vascularization.
messages: Interacts with TTL3.
messages: Receptor with a serine/threonine-protein kinase activity, which may transduce extracellular spatial and temporal signals into downstream cell differentiation responses in provascular and procambial cells. In contrast to BRI1, BRL1 and BRL3, it does not bind brassinolide.

3702:AT4G20325
gene id: 3702:AT4G20325
uniprot id: A8MRG8
uniprot id: B6EUC5
names: Function
names: Subcellular Location Annotation
messages: Non catalytic subunit of RNase H2, an endonuclease that specifically degrades the RNA of RNA:DNA hybrids. Participates in DNA replication, possibly by mediating the removal of lagging-strand Okazaki fragment RNA primers during DNA replication. Mediates the excision of single ribonucleotides from DNA:RNA duplexes.
messages: Nucleus

3702:AT1G03380
gene id: 3702:AT1G03380
uniprot id: Q8GUL1
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat PROPPIN family.
messages: By sucrose and nitrogen starvation.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Expressed in leaves.
messages: Preautophagosomal structure membrane
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy (By similarity).
messages: The first protein part may form a beta-propeller domain involved in specific binding to phosphatidylinositol 3,5-bisphosphate (PIP2), leading to the association of the protein to the membrane.
messages: Vacuole membrane

3702:AT3G21910
gene id: 3702:AT3G21910
uniprot id: Q9LRM2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G32763
gene id: 3702:AT1G32763
uniprot id: Q2V4J5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G20070
gene id: 3702:AT3G20070
uniprot id: A0A384LCV3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G76730
gene id: 3702:AT1G76730
uniprot id: Q9SRE0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
messages: Embryonic lethality when homozygous.
messages: May be involved in thiamine metabolism. Does not possess 5-formyltetrahydrofolate cyclo-ligase activity in vitro.
messages: chloroplast

3702:AT1G12560
gene id: 3702:AT1G12560
uniprot id: A0A178W749
uniprot id: Q9LN94
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Membrane
messages: cell wall

3702:AT5G52720
gene id: 3702:AT5G52720
uniprot id: F4KHL6
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Contains an apparent HMA-like domain but lacks the core conserved Cys-X-X-Cys motif.
messages: Probable heavy-metal-binding protein.

3702:AT5G55170
gene id: 3702:AT5G55170
uniprot id: A0A1P8BAE6
uniprot id: A0A1P8BAF0
uniprot id: A0A7G2FMP8
uniprot id: Q9FLP5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Cytoplasm
messages: Interacts with SAE2, SCE1, SIZ1 and MMS21 Covalently attached to a number of proteins.
messages: Nucleus
messages: Stress conditions rapidly and substantially elevates the amount of SUMO1 and SUMO2 conjugates with a concomitant reduction in the amount of free SUMO proteins. The SUMO conjugation system plays an important function in stress protection and/or repair.
messages: Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity).

3702:AT5G43285
gene id: 3702:AT5G43285
uniprot id: Q4VP09
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Binds to PRK6 LRRs.
messages: Expressed in the pistil. Detected exclusively in the synergid cells.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Pollen tube attractants guiding pollen tubes to the ovular micropyle.
messages: Secreted

3702:AT5G65050
gene id: 3702:AT5G65050
uniprot id: A0A178UKR6
uniprot id: A0A1P8BFZ7
uniprot id: A8MRI3
uniprot id: Q9FPN7
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Complex rearrangements within the MAF2-5 gene cluster plays a role in the variation of the flowering time, an ecologically important variable phenotype.
messages: Early flowering.
messages: Expressed in most plant tissues, roots, seedlings, leaves, stems, inflorescences, pollen, siliques and flowers.
messages: Nucleus
messages: Probable transcription factor that prevents vernalization by short periods of cold. Acts as a floral repressor.
messages: Requires EARLY FLOWERING 7 (ELF7) and ELF8 to be expressed. Up-regulated by HUA2.

3702:AT1G08810
gene id: 3702:AT1G08810
uniprot id: Q8GYP5
names: Biotechnology
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Constitutive reduction of stomatal opening and decreased wilting under water stress conditions resulting in abnormally turgid and green leaves as well as an enhanced tolerance to drought, and associated with an altered expression of some genes (e.g. ERD10, ERD13, NHL3, SYP122, VPEgamma, ERF and ZAT genes) mainly involved in response to stress. Normal stomatal closure in the dark and upon abscisic acid (ABA) exposure.
messages: Induced by jasmonic acid (JA) and salicylic acid (SA) (PubMed:16463103). Triggered by auxin (IAA) in roots (PubMed:9839469, PubMed:21637967). Stimulated by light, UV-light and cold (PubMed:9839469). According to PubMed:16005291 and PubMed:23828545, rapidly repressed by abscisic acid (ABA) in an ABI1-dependent manner. But in contrast, according to PubMed:21637967, transiently induced by ABA in seedlings (PubMed:16005291, PubMed:21637967, PubMed:23828545). Rapidly repressed by drought. Activated by white light, but repressed by blue light and darkness (PubMed:16005291). Transiently induced by salt (NaCl) in seedlings. Induced by sucrose (PubMed:21637967). Positively regulated by SCAP1 (PubMed:23453954).
messages: Mediates the inhibition of anthocyanin (e.g. cyanidin and delphinidin) biosynthesis when expressed in lettuce L.sativa and could thus be used for the development of new varieties of lettuce.
messages: Nucleus
messages: Promoter triggering guard cells-specific expression can be used in tobacco (N.tabacum) and tomato (S.lycopersicum) to monitor stomata genetic engineering.
messages: Specifically expressed in guard cells (PubMed:16005291, PubMed:18036199, PubMed:22088138, PubMed:23828545). Present in seedlings, leaves, stems and flowers (PubMed:16005291, PubMed:22088138).
messages: Transcription factor involved in the regulation of gene (e.g. drought-regulated and flavonoid biosynthetic genes) expression and stomatal movements leading to negative regulation of responses to drought and responses to other physiological stimuli (e.g. light) (PubMed:16005291, PubMed:21637967). Promotes guard cell deflation in response to water deficit. Triggers root growth upon osmotic stress (e.g. mannitol containing medium) (PubMed:21637967).

3702:AT1G53850
gene id: 3702:AT1G53850
uniprot id: A0A178W977
uniprot id: O81149
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.

3702:AT2G05710
gene id: 3702:AT2G05710
uniprot id: A0A178VV24
uniprot id: Q9SIB9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the aconitase/IPM isomerase family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Contributes to oxidative stress tolerance (PubMed:17013749). Modulates cytosolic citrate metabolism during lipid mobilization. Required during seedling growth (PubMed:25061985).
messages: Cytoplasm
messages: Major aconitase isoenzyme in young seedlings (PubMed:25061985). Expressed in roots, leaves, stems and flowers, and, at low levels, in seeds (PubMed:17437406).
messages: Mitochondrion
messages: Monomer (By similarity). Interacts with B'GAMMA in the cytosol (PubMed:25307043).
messages: Phosphorylated at Ser-91 in the cytoplasm; this phosphorylation requires the presence of B'GAMMA.
messages: Reduced cytosolic and mitochondrial aconitase (ACO) activities by 25 and 55 precent, respectively (PubMed:17013749, PubMed:17437406). Increased tolerance to oxidative stress mediated by paraquat, a superoxide-generating agent (PubMed:17013749). Delayed early seedling growth, altered assimilation of acetate feeding and elevated citrate and malate levels (PubMed:25061985).
messages: Transiently induced during germination.

3702:AT3G53250
gene id: 3702:AT3G53250
uniprot id: A0A178VC16
uniprot id: A0A1I9LQF0
uniprot id: A0A384LQD2
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT3G12203
gene id: 3702:AT3G12203
uniprot id: A0A1I9LS91
uniprot id: A0A1I9LS92
uniprot id: Q9C7D6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings and siliques.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT4G32530
gene id: 3702:AT4G32530
uniprot id: A0A178UXT4
uniprot id: B3H4N3
uniprot id: Q9SZY7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the V-ATPase proteolipid subunit family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: Preferentially expressed in roots.
messages: Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e). The proteolipid components c and c'' are present as a hexameric ring that forms the proton-conducting pore (By similarity).
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.

3702:AT5G25120
gene id: 3702:AT5G25120
uniprot id: A0A5S9Y709
uniprot id: P58049
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT2G41970
gene id: 3702:AT2G41970
uniprot id: P93749
names: Similarity
messages: Belongs to the protein kinase superfamily. Tyr protein kinase family.

3702:AT5G44740
gene id: 3702:AT5G44740
uniprot id: Q8H2D5
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DNA polymerase type-Y family.
messages: Binds 2 Mg(2+). Prefers Mg(2+), but can also use Mn(2+). In vitro, can also utilize other divalent cations such as Ca(2+).
messages: Constitutively expressed in roots, stems, leaves, flowers and siliques.
messages: Enhanced sensitivity to UV radiation accompanied by an increased mutation frequency. Shorter root and stem growth.
messages: Error-free DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis (TLS), where the normal high fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Plays an important role in the repair of UV-induced pyrimidine dimers and confers resistance to ultraviolet light. Depending on the context, it inserts the correct base, but may cause base transitions and transversions. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity. Targets POLI to replication foci. Exhibits cyclobutane dimer nonmutagenic bypass activity in vitro.
messages: Interacts with PCNA1 and PCNA2. The interaction with PCNA2 is required for translesion synthesis (TLS) to repair UV photoproducts.
messages: Nucleus
messages: The catalytic core consists of fingers, palm and thumb subdomains, but the fingers and thumb subdomains are much smaller than in high-fidelity polymerases; residues from five sequence motifs of the Y-family cluster around an active site cleft that can accommodate DNA and nucleotide substrates with relaxed geometric constraints, with consequently higher rates of misincorporation and low processivity.
messages: The enzyme in complex with the DNA substrate binds a third divalent metal cation. The binding of this third divalent cation, which is coordinated by water molecules and two oxygen atoms from DNA and dNTP, is essential for catalyzing the DNA synthesis.

3702:AT1G73280
gene id: 3702:AT1G73280
uniprot id: A0A1P8AWM7
uniprot id: A0A1P8AWR4
uniprot id: A0A1P8AWR8
uniprot id: Q9CAU1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in roots.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT3G04580
gene id: 3702:AT3G04580
uniprot id: A0A178VKQ4
uniprot id: Q9ZTP3
names: Caution
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated predominantly on Ser residues.
messages: Belongs to the ethylene receptor family.
messages: Binds 1 copper ion per dimer.
messages: Endoplasmic reticulum membrane
messages: Ethylene receptor related to bacterial two-component regulators.
messages: Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling.
messages: Expressed in embryos, etiolated seedlings, leaves, roots, inflorescences, stamens, pollen cells and tapetum cells. Moderate expression in carpels.
messages: Heteromer with ETR1 (PubMed:18577522). Binds to MRF3/ECIP1 (PubMed:21631530).
messages: Membrane
messages: Not induced by ethylene.
messages: The article by Li et al was retracted by the editors after publication. Concerns were raised regarding a number of figure panels, such as partial overlap between the panels and duplication of protein gel analysis.

3702:AT4G26520
gene id: 3702:AT4G26520
uniprot id: A0A1P8B8Q8
uniprot id: A0A1P8B8S7
uniprot id: A0A654FT01
uniprot id: P22197
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: Down-regulated by cadmium (PubMed:16797112). Induced by glucose and sucrose (PubMed:22561114). Induced by drought stress (PubMed:22561114).
messages: Highly expressed in flowers, and at lower levels in rosettes leaves and cauline leaves.
messages: Homotetramer.
messages: Plays a key role in glycolysis and gluconeogenesis.
messages: S-glutathionylated at Cys-68 and Cys-173.
messages: S-nitrosylated at Cys-173.
messages: cytosol

3702:AT3G07200
gene id: 3702:AT3G07200
uniprot id: A0A384LAJ8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G53330
gene id: 3702:AT1G53330
uniprot id: Q9MAG8
names: Function
names: Similarity
messages: Belongs to the PPR family. P subfamily.
messages: Involved during embryo development.

3702:AT2G34840
gene id: 3702:AT2G34840
uniprot id: B3H5Z4
uniprot id: O64748
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the COPE family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3702:AT4G02060
gene id: 3702:AT4G02060
uniprot id: A0A654FL69
uniprot id: P43299
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in nucleus during the G1 phase of the cell cycle. During mitosis, the protein rapidly disappears, returning to daughter nuclei during G1.
messages: Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.
messages: Belongs to the MCM family.
messages: By both rootknot and cyst nematode infections.
messages: Component of the minichromosome maintenance (MCM) complex, a heterotetramer composed of MCM2, MCM3, MCM4, MCM5, MCM6 and MCM7. Interacts with ETG1.
messages: Cytoplasm
messages: Expressed in shoot apex and flower buds.
messages: Nucleus
messages: Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells (By similarity). Required for megagametophyte and embryo development.

3702:AT4G34670
gene id: 3702:AT4G34670
uniprot id: A0A178UZT1
uniprot id: Q42262
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein eS1 family.
messages: Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S).
messages: Cytoplasm

3702:AT5G18050
gene id: 3702:AT5G18050
uniprot id: A0A178UAM2
uniprot id: Q9FJF7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: By auxin.
messages: Cell membrane
messages: Functions as positive effectors of cell expansion through modulation of auxin transport.

3702:AT4G08590
gene id: 3702:AT4G08590
uniprot id: A0A1P8B4T9
uniprot id: A0A1P8B4U7
uniprot id: A0A1P8B4V7
uniprot id: Q681I0
names: Domain
names: Function
names: Subcellular Location Annotation
messages: E3 ubiquitin-protein ligase. May participate in methylation-dependent transcriptional regulation. Mediates ubiquitination with the E2 ubiquitin-conjugating enzyme UBC11.
messages: Membrane
messages: Nucleus
messages: The RING fingers are required for ubiquitin ligase activity.
messages: The YDG domain mediates the interaction with histone H3.

3702:AT2G24765
gene id: 3702:AT2G24765
uniprot id: A0A178VQT4
uniprot id: P40940
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Arf family.
messages: GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus.
messages: Golgi apparatus
messages: Interacts with GRIP; but preferentially when bound to GTP.

3702:AT1G12390
gene id: 3702:AT1G12390
uniprot id: A0A178W5R8
uniprot id: Q84W04
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornichon family.
messages: Membrane

3702:AT2G07695
gene id: 3702:AT2G07695
uniprot id: P92559
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07695) is not demonstrated.
messages: Belongs to the cytochrome c oxidase subunit 2 family.
messages: Mitochondrion membrane

3702:AT5G10450
gene id: 3702:AT5G10450
uniprot id: A0A178UDW2
uniprot id: F4KGV2
uniprot id: F4KGV5
uniprot id: P48349
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: By cold.
messages: Cell membrane
messages: Cytoplasm
messages: Increased length of hypocotyls under dark-grown conditions. Altered actin arrays in hypocotyl cells. Enhanced freezing tolerance associated with enhanced cold induction of cold-responsive C-repeat-binding factor (CBF) target genes in the double mutant lacking both GRF6 and GRF8, probably due to the suppression of ubiquitin-mediated degradation DREB1A and DREB1B degradation by the 26S proteasome pathway (PubMed:28344081).
messages: Interacts with SERK1 in the cell membrane. Component of the SERK1 signaling complex, composed of KAPP, CDC48A, GRF6 or GRF7, SERK1, SERK2, SERK3/BAK1 and BRI1 (PubMed:15592873). Interacts with TPK1 (PubMed:17764516). Interacts with ADF1 (PubMed:26345162). Binds to CRPK1 at the plasma membrane. Interacts with DREB1A and DREB1B in the nucleus when activated by CRPK1-mediated phosophorylation upon freezing (PubMed:28344081). Interacts with CINV1 (PubMed:25256212).
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes (By similarity). Specific negative regulator of slow-vacuolar (SV) ion channel. Mediates F-actin dynamics possibly through inhibiting ADF1 phosphorylation (PubMed:26345162). Negative regulator of freezing tolerance that modulates cold-responsive C-repeat-binding factors (CBF) DREB1A and DREB1B proteins stability by facilitating their ubiquitin-mediated degradation when activated by CRPK1-mediated phosophorylation in freezing conditions (PubMed:28344081).
messages: Nucleus
messages: Phosphorylated by CRPK1 in response to cold.
messages: Transphosphorylated by SERK1.

3702:AT3G23630
gene id: 3702:AT3G23630
uniprot id: Q94ID1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the IPP transferase family.
messages: Down-regulated by cytokinins and up-regulated by auxin.
messages: Expressed in both the vascular stele and the phloem companion cells of the root, in endodermis of the root elongation zone, trichomes on young leaves, and some pollen tubes.
messages: Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP and ADP.
messages: Mitochondrion
messages: No visible phenotype, due the redundancy with other IPTs.

3702:AT5G57150
gene id: 3702:AT5G57150
uniprot id: A0A1P8BCX2
uniprot id: F4KAJ4
uniprot id: F4KAJ5
uniprot id: Q2HIV9
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT1G25375
gene id: 3702:AT1G25375
uniprot id: A0A178W7E3
uniprot id: Q682P6
names: Similarity
messages: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.

3702:AT1G06143
gene id: 3702:AT1G06143
uniprot id: Q56X05
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT5G63960
gene id: 3702:AT5G63960
uniprot id: A0A178UA08
uniprot id: F4KC69
uniprot id: Q9LVN7
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-B family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Heterodimer with subunits of 125 kDa and 50 kDa. The 125 kDa subunit contains the polymerase active site and most likely the active site for the 3'-5' exonuclease activity (By similarity).
messages: In eukaryotes there are five DNA polymerases: alpha, beta, gamma, delta, and epsilon which are responsible for different reactions of DNA synthesis.
messages: Nucleus
messages: The CysB motif binds 1 4Fe-4S cluster and is required for the formation of polymerase complexes.
messages: This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction.

3702:AT1G69860
gene id: 3702:AT1G69860
uniprot id: A0A654EYB5
uniprot id: Q9CAR9
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Could be the product of a pseudogene.
messages: Membrane
messages: Not detected.

3702:AT2G21940
gene id: 3702:AT2G21940
uniprot id: A0A5S9X0D4
uniprot id: A8MRG1
uniprot id: F4IIJ2
uniprot id: Q9SJ05
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the shikimate kinase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: By heat stress.
messages: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
messages: Homodimer.
messages: No visible phenotype under normal growth conditions.
messages: SK1 forms a homodimer in solution, which may facilitate its relative thermostability when exposed at 37 degrees Celsius.
messages: chloroplast

3702:AT2G36060
gene id: 3702:AT2G36060
uniprot id: A0A178VRN9
uniprot id: Q9SJ44
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Detected in seedlings 6 hours post-germination, but not 2 days post-germination.
messages: Expressed in roots, shoots, leaves, stems and flowers, but not in pollen.
messages: Has no ubiquitin ligase activity on its own. The heterodimer with UBC catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. May play a role in the control of progress through the cell cycle and differentiation. May play a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage.
messages: Heterodimer with UBC35 or UBC36.
messages: May be due to a competing donor splice site.
messages: Not induced by stresses.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26700
gene id: 3702:AT3G26700
uniprot id: A0A1I9LRZ2
uniprot id: A0A654FB08
uniprot id: F4JDN8
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT3G23300
gene id: 3702:AT3G23300
uniprot id: A0A178VBP4
uniprot id: Q8H118
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Co-expressed with the galacturonosyltransferases GAUT8/QUASIMODO1 and GAUT9.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT4G33355
gene id: 3702:AT4G33355
uniprot id: Q2V3C1
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).

3702:AT1G58080
gene id: 3702:AT1G58080
uniprot id: A0A178WM39
uniprot id: Q9S762
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
messages: Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP).
messages: Expressed in leaves and at lower levels in roots (at protein level).
messages: Feedback inhibited by L-histidine.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT4G38410
gene id: 3702:AT4G38410
uniprot id: A0A654FWR6
uniprot id: Q8GY17
names: Similarity
messages: Belongs to the plant dehydrin family.

3702:AT3G56240
gene id: 3702:AT3G56240
uniprot id: O82089
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATX1 family.
messages: Binds 1 copper ion per subunit.
messages: Expressed in phloem (at protein level).
messages: Induced by copper deficiency, ozone and senescence. Down-regulated by excess of copper.
messages: Involved in copper homeostasis. Can complement the yeast mutants atx1 and sod1.
messages: No visible phenotype under normal growth conditions.

3702:AT3G06650
gene id: 3702:AT3G06650
uniprot id: A0A178V742
uniprot id: Q9C522
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. May supply substrate to the cytosolic acetyl-CoA carboxylase, which generates the malonyl-CoA used for the synthesis of a multitude of compounds, including very long chain fatty acids and flavonoids. Required for normal growth and development and elongation of C18 fatty acids to C20 to C24 fatty acids in seeds. In contrast to all known animal ACL enzymes having a homomeric structure, plant ACLs are composed of alpha and beta chains (By similarity).
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: cytosol

3702:AT3G56060
gene id: 3702:AT3G56060
uniprot id: A0A5S9XLF4
uniprot id: Q93ZK1
names: Similarity
messages: Belongs to the GMC oxidoreductase family.

3702:AT4G37390
gene id: 3702:AT4G37390
uniprot id: A0A7G2F6K9
uniprot id: Q9SZT9
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: By auxin. Down-regulated by blue and far red lights.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin. Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val. Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys. Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA). The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates.
messages: Expressed in flowers, pollen, cotyledons, stipules, true leaves, hypocotyls, and all parts of the roots except for the primary root tips.

3702:AT4G08350
gene id: 3702:AT4G08350
uniprot id: A0A178UTQ8
uniprot id: Q9STN3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SPT5 family.
messages: May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (By similarity).
messages: Nucleus

3702:AT4G04955
gene id: 3702:AT4G04955
uniprot id: A0A1P8B436
uniprot id: Q94AP0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Carboxylation allows a single lysine to coordinate two zinc ions.
messages: Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoate by hydrolytic cleavage of the five-member hydantoin ring. Catalyzes the first step of the ureide allantoin degradation followed by the sequential activity of AAH, UGLYAH and UAH which allows a complete purine breakdown without the intermediate generation of urea.
messages: Homotetramer.
messages: In Arabidopsis the intermediary metabolite allantoin plays a role in abiotic stress tolerance via activation of abscisic acid (ABA) metabolism.
messages: No visible phenotype under normal growth conditions, but mutant plants are unable to grow on a medium containing allantoin as the sole nitrogen source, accumulate allantoin and have increased tolerance to drought and osmotic stresses.

3702:AT2G03190
gene id: 3702:AT2G03190
uniprot id: O81055
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: Mainly detected in the siliques.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with CPR1/CPR30, At3g61590 and At4g11590.

3702:AT5G47220
gene id: 3702:AT5G47220
uniprot id: A0A178UCP3
uniprot id: O80338
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Involved in disease resistance pathways.
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Induced by jasmonate (JA) and Alternaria brassicicola (locally and systemically). Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2) while wounding induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress.
messages: Nucleus
messages: The AP2/ERF domain binds specifically to the 5'-GCCGCC-3' motif. The affinity of this binding is higher if the seventh amino-acid of this domain is basic (By similarity).

3702:AT4G14400
gene id: 3702:AT4G14400
uniprot id: Q8LPS2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in systemic uninfected tissues during Pseudomonas syringae infection or upon benzothiazole (BTH) treatment. Induced by light, but repressed by dark (PubMed:14507999). Accumulates upon MG132 treatment, a proteasome inhibitor. Target of endoplasmic reticulum-associated degradation (ERAD) when ubiquitinated (PubMed:24923602).
messages: Basal expression requires light and salicylic acid (SA).
messages: Cell membrane
messages: Component of large complexes containing, at least, FLS2, HSP70 and ACD6 in endoplasmic reticulum, plasma membrane and soluble fraction. Associated with HSP70 proteins during endoplasmic reticulum-associated degradation (ERAD). Reduced complex levels upon benzothiazole (BTH) treatment.
messages: Dose-dependent activator of the defense response against virulent pathogens, including bacteria, fungi and oomycetes, that acts in a positive feedback loop with the defense signal salicylic acid (SA) (PubMed:14507999, PubMed:20520716, PubMed:10488236, PubMed:16297071, PubMed:19144005). Regulates the salicylic acid (SA) signaling pathway leading to cell death and modulating cell fate (e.g. cell enlargement and/or cell division) (PubMed:14507999, PubMed:10488236, PubMed:11722764). In response to SA signaling, triggers the accumulation of FLS2 at the plasma membrane, thus priming defenses (PubMed:24923602). Involved in SA-dependent freezing signaling and tolerance (PubMed:19959255).
messages: Endoplasmic reticulum membrane
messages: Expression in leaves increases with age.
messages: Reduced responsiveness to benzothiazole (BTH) and upon P. syringae infection with reduced salicylic acid (SA) levels and increased disease susceptibility and attenuated defenses (PubMed:14507999). Increased sensitivity to biotrophic fungi (e.g. Golovinomyces orontii T1 and G. cichoracearum UCSC1), biotrophic oomycetes (e.g. Hyaloperonospora arabidopsidis Noco2) and hemi-biotrophic bacteria (e.g. Pseudomonas syringae pv. tomato DC3000) (PubMed:20520716).
messages: Sequence variations impacting defense responses are observed between cultivars. Enhanced resistance is correlated with a substantial reduction in vegetative biomass.
messages: The dominant gain-of-function mutant acd6-1 and over-expressing plant ACD6-o is dwarf and shows spontaneous cell death and increased disease resistance, as well as increased defenses and better responsiveness to salicylic acid (SA). These symptoms are SA-dependent (PubMed:14507999, PubMed:20520716, PubMed:10488236, PubMed:16297071, PubMed:19144005). In acd6-1, constitutively high free and total SA levels leading to collapsed dead cells with adjacent enlarged cells in the palisade parenchyma cell layer. This phenotype is absent in NahG background, in which SA is degraded (PubMed:11722764). Strong accumulation of camalexin (an anti-fungal compound) and SA in acd6-1 (PubMed:19144005). The mutant acd6-1 exhibits freezing sensitivity, this sensitivity is suppressed in nahG background (PubMed:19959255).
messages: Ubiquitinated.

3702:AT5G09940
gene id: 3702:AT5G09940
uniprot id: A0A178UQS4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G56690
gene id: 3702:AT3G56690
uniprot id: Q9LET7
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the AAA ATPase family.
messages: Expressed in the whole plant.
messages: Interacts with CAM2.

3702:AT1G68260
gene id: 3702:AT1G68260
uniprot id: Q8W583
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acyl-ACP thioesterase involved in the production of fatty acids and beta-keto fatty acids. Can produce fatty acids of long chain (14:1 and 16:1) and beta-keto fatty acids of medium to long chain (8:0, 10:0, 12:0, 12:1, 14:0 and 16:0) when expressed in a heterologous organism (E.coli). Possesses thioesterase activity for lauroyl-ACP (12:0-ACP) in vitro. May play a role in the generation of long fatty acids in the chloroplast.
messages: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family.
messages: Highly expressed in stems and flowers and at lower levels in rosette leaves, cauline leaves and siliques.
messages: chloroplast

3702:AT5G45277
gene id: 3702:AT5G45277
uniprot id: A0A1P8BEG4
names: Similarity
messages: Belongs to the protease inhibitor I13 (potato type I serine protease inhibitor) family.

3702:AT5G52840
gene id: 3702:AT5G52840
uniprot id: A0A178UMH4
uniprot id: A0A1P8BD41
uniprot id: Q9FLX7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA5 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane

3702:AT3G13930
gene id: 3702:AT3G13930
uniprot id: Q8RWN9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Mitochondrion matrix
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).

3702:AT5G51340
gene id: 3702:AT5G51340
uniprot id: A0A5S9YD00
uniprot id: Q9FGN7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SCC4/mau-2 family.
messages: Cytoplasm
messages: Defective embryo arrested at preglobular/early globular stage. Suspensor overproliferation phenotype preceded by ectopic auxin maxima distribution. Reduced efficacy of cohesin immobilization in nuclei.
messages: Essential protein required for cell fate determination during embryogenesis. Involved in sister chromatid cohesion. Forms a complex with SCC2, which is required for the association of the cohesin complex with chromosomes.
messages: Expressed ubiquitously.
messages: Interacts with SCC2 to form the cohesin loading complex.
messages: Nucleus

3702:AT2G20930
gene id: 3702:AT2G20930
uniprot id: A0A178VLL4
uniprot id: Q9SKS7
names: Similarity
messages: Belongs to the TRAPP small subunits family. Sedlin subfamily.

3702:AT1G48530
gene id: 3702:AT1G48530
uniprot id: A0A178WGC9
uniprot id: Q5XVJ3
names: Caution
names: Similarity
messages: Belongs to the proteasome inhibitor PI31 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G18910
gene id: 3702:AT2G18910
uniprot id: A0A178VQG2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G02360
gene id: 3702:AT2G02360
uniprot id: Q9ZVQ6
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1B/ASK2, ASK11 and ASK12.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G39580
gene id: 3702:AT5G39580
uniprot id: A0A654G6F8
uniprot id: F4KEH2
uniprot id: Q9FKA4
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Mainly expressed in roots.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Transiently induced a few minutes after mechanical wounding.

3702:AT5G56120
gene id: 3702:AT5G56120
uniprot id: A0A178U979
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G04040
gene id: 3702:AT4G04040
uniprot id: F4JGR5
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by fructose 2,6-bisphosphate.
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Clade 'Long' sub-subfamily.
messages: Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis.
messages: Cytoplasm
messages: Tetramer of two alpha (regulatory) and two beta (catalytic) chains.

3702:AT2G44270
gene id: 3702:AT2G44270
uniprot id: A0A178VUZ0
uniprot id: O64862
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TtcA family. CTU1/NCS6/ATPBD3 subfamily.
messages: Cytoplasm
messages: Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G46110
gene id: 3702:AT3G46110
uniprot id: A0A1I9LLA9
uniprot id: A0A654FI85
uniprot id: Q8GY65
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Soseki' means cornerstone in Japanese.
messages: Belongs to the SOSEKI family.
messages: Cell membrane
messages: During embryogenesis, first observed at the globular stage and accumulates in cells next to the suspensor, including lens-shaped cells (PubMed:30737509). Observed at low levels in few vascular cells of the primary root (PubMed:30737509). Also expressed in lateral root (PubMed:30737509).
messages: Expressed during embryogenesis and in roots.
messages: Homodimer (By similarity). Forms long polymer filaments with other SOKs proteins polymers (e.g. SOK1, SOK2, SOK3 and SOK4) crucial for polar localization and biological activity (PubMed:32004461). Binds to ANGUSTIFOLIA (AN) (PubMed:32004461).
messages: Membrane
messages: SOSEKI proteins (SOK1-5) locally interpret global polarity cues and can influence cell division orientation to coordinate cell polarization relative to body axes, probably by guiding ANGUSTIFOLIA (AN) polarized localization (PubMed:30737509). Positive regulator of auxin (indole-3-acetic acid, IAA) biosynthesis and signaling pathway leading to the modulation of seedling growth, plant and inflorescence development (PubMed:31207460). Negative regulator of stress responses (e.g. salinity and osmotic stress) (PubMed:31207460).
messages: The DIX-like oligomerization domain is required for polymerization, edge localization and biological activity.

3702:AT3G55100
gene id: 3702:AT3G55100
uniprot id: A0A5S9XL28
uniprot id: Q9M2V6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane

3702:AT3G49720
gene id: 3702:AT3G49720
uniprot id: Q9M2Y6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Plants lacking both CGR2 and CGR3 (cgr2-1 cgr3-1) exihibit severe defects in plant growth and development (e.g. shorter hypocotyl and primary root length due to reduced cell elongation, and abnormal pollen tube elongation), as well as reduced levels of pectin methylesterification associated with decreased microsomal pectin methyltransferase activity. The double mutant cgr2-1 cgr3-1 also lacks uronic acids and methyl ester (PubMed:25704846). Reduced HG methylesterification in cgr2-1 cgr3-1 double mutant results in thin but dense leaf mesophyll that limits CO(2) diffusion to chloroplasts and reduces leaf area, thus impairing photosynthesis efficiency and carbon (C) partitioning (PubMed:27208234).
messages: Together with CGR3, required for homogalacturonan pectins (HG) methylesterification in the Golgi apparatus prior to integration into cell walls, essential for general growth and development (PubMed:25704846, PubMed:27208234). Promotes rosette growth (PubMed:25704846). Impacts carbon (C) partitioning, photosynthesis and respiration efficiency by influencing leaf mesophyll cell walls morphology and physiology; pectin methylesterification modulates both expansion and positioning of cells in leaves, probably by changing cell walls plasticity (PubMed:27208234).

3702:AT1G64140
gene id: 3702:AT1G64140
uniprot id: A0A178W3P6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G26480
gene id: 3702:AT2G26480
uniprot id: O48715
names: Function
names: Sequence Caution
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses low quercetin 7-O-glucosyltransferase activity in vitro.
messages: Sequencing errors.

3702:AT3G48590
gene id: 3702:AT3G48590
uniprot id: Q9SMP0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYC/HAP5 subunit family.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Nucleus
messages: Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
messages: Ubiquitous. Present in etiolated seedlings.

3702:AT4G37750
gene id: 3702:AT4G37750
uniprot id: Q38914
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Expressed in floral primordia, in STM-negative region, then in sepal primordia. As sepal develops, progressively confined to a basal core before disappearing. Present in stamen primordia, then confined to a central region as they become stalked and develop locules. Later reduced to procambial cells as stamen mature. From petal primordia, expressed on the lateral edges of developing petals and finally confined to petal epidermis before disappearing. Present in carpel primordia, then in inner side of carpels especially in the placenta. Strong levels in ovules primordia and young ovules, then localized in integuments initiation zone before being confined to inner integument cells that will differentiate into the endothelium. Expressed in the distal half of the funiculus throughout ovule development and later extends into the chalaza. After fertilization, expression shift to the embryo. First on the apical part at the globular stage, then in cotyledons primordia, and later in cotyledons during the torpedo stage. As cotyledons grow out, expression becomes limited to a plane separating adaxial and abaxial parts. Excluded from the embryonic central region (ECR). In seedlings, found in leaf primordia then in central and lateral actively developing regions of extending leaves.
messages: Interacts with ANL2, HDG2 and HDG10, and possibly with GL2, HDG3, HDG8, ATML1 and PDF2.
messages: Mostly expressed in developing flowers. Also present in mature flowers, siliques and seedlings, but not in mature roots, leaves and stems. Expressed in ovules and in vegetative and floral primordia.
messages: Nucleus
messages: Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CAC[AG]N[AT]TNCCNANG-3'. Required for the initiation and growth of ovules integumenta, and for the development of female gametophyte. Plays a critical role in the development of gynoecium marginal tissues (e.g. stigma, style and septa), and in the fusion of carpels and of medial ridges leading to ovule primordia. Also involved in organs initiation and development, including floral organs. Maintains the meristematic competence of cells and consequently sustains expression of cell cycle regulators during organogenesis, thus controlling the final size of each organ by controlling their cell number. Regulates INO autoinduction and expression pattern. As ANT promotes petal cell identity and mediates down-regulation of AG in flower whorl 2, it functions as a class A homeotic gene.

3702:AT4G25410
gene id: 3702:AT4G25410
uniprot id: A0A654FSM0
uniprot id: Q9STJ6
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT3G51740
gene id: 3702:AT3G51740
uniprot id: Q9SCT4
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in meristems, including roots, vegetative, inflorescence and floral meristems.
messages: The protein kinase domain is predicted to be catalytically inactive. Lacks the conserved Asp active site at position 661, which is replaced by an Asn residue.

3702:AT4G21300
gene id: 3702:AT4G21300
uniprot id: Q9STE1
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT4G25080
gene id: 3702:AT4G25080
uniprot id: Q9SW18
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Magnesium protoporphyrin O-methyltransferase family.
messages: Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor. Involved in chloroplast-to-nucleus signaling by acting as a negative effector of nuclear photosynthetic gene expression.
messages: Lethal under normal growth conditions and stunted albino plants unable to produce seeds when grown in presence of sucrose.
messages: Regulated by the folate status via an increased concentration of S-adenosyl-homocysteine (AdoHcy), a potent inhibitor of most AdoMet-dependent methyltransferases.
messages: Up-regulated by light. Down-regulated by the herbicide R-imazethapyr.
messages: chloroplast membrane
messages: chloroplast thylakoid membrane

3702:AT1G23100
gene id: 3702:AT1G23100
uniprot id: A0A178WB77
uniprot id: Q8LDC9
names: Similarity
messages: Belongs to the GroES chaperonin family.

3702:AT3G06985
gene id: 3702:AT3G06985
uniprot id: P82759
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G01280
gene id: 3702:AT1G01280
uniprot id: A0A178WMS1
uniprot id: Q9LNJ4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Impaired pollen development and partial male-sterile phenotype.
messages: Involved in pollen wall development. Catalyzes the conversion of medium-chain saturated fatty acids to the corresponding monohydroxylated fatty acids, with a preferential hydroxylation of lauric acid at the C-7 position. In-chain hydroxylated fatty acids, together with omega-hydroxylated fatty acids, are key monomeric aliphatic building blocks for sporopollenin synthesis during exine formation.
messages: Membrane
messages: Specifically expressed in the tapetum cell layer and the microspores of anthers at the tetrad stage. Expression starts to decrease during pollen maturation and tapetum cell degeneration to finally disappear.

3702:AT3G47000
gene id: 3702:AT3G47000
uniprot id: A0A1I9LR68
uniprot id: A0A1I9LR69
uniprot id: Q9SD73
names: Similarity
messages: Belongs to the glycosyl hydrolase 3 family.

3702:AT4G07410
gene id: 3702:AT4G07410
uniprot id: Q8RXU6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: During early phases of embryogenesis, expressed in all the cells of the embryo proper and the suspensor until the 32-cell embryo stage. At the heart stage, expression completely disappears in the suspensor, but remains in the embryo proper. After germination, expressed in shoot apical meristem (SAM), leaf primordia, root apical meristem (RAM), and lateral root primordia.
messages: Involved in auxin signaling pathway. Required for embryo development and meristem organization. Functions in the auxin pathway, integrating auxin signaling in the organization and maintenance of the shoot apical meristem (SAM) and root apical meristem (RAM).
messages: Nucleus
messages: Temperature-sensitive phenotype. Defective in embryo development and embryo lethality when grown at 22 degrees Celsius. Embryo lethality phenotype rescued when grown at 29 degrees Celsius. Germination of temperature-rescued pcn mutant seeds give plants with small and narrow-shaped leaves, abnormal leaf vein patterns, altered flowering organs and defects in the root apical meristem (RAM).

3702:AT2G38390
gene id: 3702:AT2G38390
uniprot id: O80912
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: By methyl jasmonate, a plant defense-related signaling molecule.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT1G02440
gene id: 3702:AT1G02440
uniprot id: A0A1P8AVU2
uniprot id: F4HXI5
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3702:AT1G22110
gene id: 3702:AT1G22110
uniprot id: A0A654EMT3
uniprot id: Q9LM48
names: Similarity
messages: Belongs to the fantastic four family.

3702:AT5G05970
gene id: 3702:AT5G05970
uniprot id: B3H5K9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in root meristematic cells.
messages: Lethal when homozygous. Compromised asymmetric mitotic division in dividing microspores resulting in abortion of gametogenesis.
messages: Nucleus envelope
messages: Regulates microtubules organization in a centrosome-independent manner. Required for the spindle to be positioned correctly and for the function of gamma-tubulin in organizing phragmoplast microtubules (PubMed:19383896). Component of active gamma-tubulin ring complexes (gamma-TuRCs) associated with cortical microtubules in interphase cells (PubMed:25438942). Mediates gamma-TuRC recruitment to the nucleation sites and is important for determining the ratio of branched to parallel nucleation (PubMed:25438942). May mediate the localization of GCP2 and GCP3 to the nuclear envelope (PubMed:19383896).
messages: kinetochore
messages: microtubule organizing center
messages: phragmoplast

3702:AT1G51670
gene id: 3702:AT1G51670
uniprot id: Q8RY97
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the heat induced plant HTT protein family.
messages: Cytoplasm
messages: Expressed in seedlings, leaves, stems, inflorescences and siliques.
messages: Mediates both basal and acquired thermotolerance. Involved in the mechanisms necessary for quick response to heat and subsequent heritable transgenerational memory of heat acclimation (global warming) such as early flowering and attenuated immunity; this process includes epigenetic regulation as well as post-transcriptional gene silencing (PTGS) (PubMed:30778176). In response to heat, HSFA2 is activated and promotes the expression of REF6 which in turn derepresses HSFA2, thus establishing an heritable feedback loop able to trigger SGIP1 and subsequent SGIP1-mediated SGS3 degradation; this prevents the biosynthesis of trans-acting siRNA (tasiRNA) and leads to the release of HTT5, which drives early flowering but attenuates immunity (PubMed:30778176).
messages: Nucleus
messages: Target of TAS1 (trans-acting siRNA precursor 1)-derived small interfering RNAs in response to temperature variations. Up-regulated by cold (at 4 degrees Celsius) (PubMed:20622450). Highly up-regulated in seedlings exposed to heat shock (PubMed:24728648).

3702:AT2G42710
gene id: 3702:AT2G42710
uniprot id: A0A178VQC0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G12120
gene id: 3702:AT4G12120
uniprot id: Q9SZ77
names: Function
names: Similarity
messages: Belongs to the STXBP/unc-18/SEC1 family.
messages: Involved in the vesicle trafficking. Binds syntaxins (By similarity).

3702:AT5G39000
gene id: 3702:AT5G39000
uniprot id: Q9FID8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G06390
gene id: 3702:AT1G06390
uniprot id: A0A178WCN5
uniprot id: Q39012
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Autophosphorylated mainly on threonine and serine residues.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. GSK-3 subfamily.
messages: Binds to KIB1 (PubMed:28575660). Interacts with BSK6 (PubMed:23496207).
messages: Phosphorylates BSK1, BSK3, BSK5, BSK6, BSK8 and BSK11 in vitro (PubMed:23496207). May mediate extracellular signals to regulate transcription in differentiating cells (By similarity).

3702:AT4G27000
gene id: 3702:AT4G27000
uniprot id: A0A178UW18
uniprot id: Q93W34
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the polyadenylate-binding RBP45 family.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
messages: Interacts with the poly(A) tail of mRNA in nucleus.
messages: Mostly expressed in seedlings and stems, and, to a lower extent, in leaves and flowers.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G03910
gene id: 3702:AT1G03910
uniprot id: F4I2J8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CACTIN family.
messages: Embryo lethality when homozygous.
messages: Interacts with At5g63440.
messages: Nucleus speckle
messages: Plays a role in pre-mRNA splicing by facilitating excision of a subset of introns (By similarity). Required for embryogenesis (PubMed:23454656).

3702:AT1G16540
gene id: 3702:AT1G16540
uniprot id: A0A1P8AVE2
uniprot id: A0A1P8AVG9
uniprot id: Q9C5X8
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. MOCOS subfamily.
messages: Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
messages: Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. Modulates cold stress- and osmotic stress-responsive gene expression by acting as key regulator of abscisic acid (ABA) biosynthesis.
messages: Ubiquitously expressed.
messages: Up-regulated in response to drought, salt or ABA treatment.

3702:AT3G02320
gene id: 3702:AT3G02320
uniprot id: A0A178VEZ9
uniprot id: Q9SRU7
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
messages: Dimethylates a single guanine residue at position 26 of most tRNAs using S-adenosyl-L-methionine as donor of the methyl groups.

3702:AT3G66658
gene id: 3702:AT3G66658
uniprot id: F4JC27
uniprot id: Q0WSF1
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the aldehyde dehydrogenase family.
messages: Constituively expressed at low levels.
messages: Not induced by abscisic acid (ABA), dehydration and salt stress.
messages: Secreted

3702:AT1G68540
gene id: 3702:AT1G68540
uniprot id: Q9CA28
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.
messages: Cytoplasm
messages: May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.
messages: No visible phenotype under normal growth conditions.

3702:AT5G06960
gene id: 3702:AT5G06960
uniprot id: A0A178UIF0
uniprot id: A0A1R7T3A8
uniprot id: Q39163
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Binds DNA as a dimer. Interaction with the Dof domain protein OBP1 enhances the binding to the ocs element. Interacts with NPR1, NPR3 and NPR4.
messages: Nucleus
messages: Predominantly expressed in roots.
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

3702:AT4G34880
gene id: 3702:AT4G34880
uniprot id: A0A1P8B760
names: Similarity
names: Tissue Specificity
messages: Belongs to the amidase family.
messages: Expressed in vasculature of roots, cotyledons, leaves and sepals.

3702:AT5G22640
gene id: 3702:AT5G22640
uniprot id: Q8LPR8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in developing embryo.
messages: Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope (PubMed:23372012). Plays an important role during embryogenesis and chloroplast biogenesis (PubMed:20738804).
messages: Part of the Tic complex. Component of the 1-MD complex, composed of TIC20-I, TIC214, TIC100 and TIC56. Interacts with the translocating preproteins. Hydrolysis of ATP is essential for the formation of this complex (PubMed:23372012). The 1-MD complex interacts with TIC21 (By similarity).
messages: Preferentially expressed in ovules, and moderately expressed in leaves and siliques.
messages: Severe defects during embryogenesis, producing abnormal embryos and thereby leading to a lethality of young seedlings.
messages: chloroplast inner membrane

3702:AT1G23900
gene id: 3702:AT1G23900
uniprot id: A0A1P8AT76
uniprot id: Q84K16
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 1 (AP-1) is a heterotetramer composed of two large adaptins (gamma-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit) (Probable). Binds to EPSIN1 (PubMed:16905657). Interacts with DRP2A/ADL6 (via C-terminus) (PubMed:12207647).
messages: Belongs to the adaptor complexes large subunit family.
messages: Golgi apparatus
messages: Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity).
messages: clathrin-coated vesicle membrane

3702:AT2G24520
gene id: 3702:AT2G24520
uniprot id: A0A1P8B2U9
uniprot id: A0A1P8B2V0
uniprot id: A0A1P8B2Y6
uniprot id: Q9SJB3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Binds to 14-3-3 proteins. The binding is induced by phosphorylation of Thr-948. Binding to 14-3-3 proteins activates the H(+)-ATPase (By similarity).
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity).

3702:AT1G12550
gene id: 3702:AT1G12550
uniprot id: A0A7G2DSP2
uniprot id: Q9LE33
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GyaR subfamily.
messages: Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate (HP) into glycolate and glycerate. Mostly active in the presence of NADPH and glyoxylate.
messages: Disrupted photorespiratory flux leading to a slight altered leaf concentrations of the photorespiratory intermediates hydroxypyruvate (HP), glycerate, and glycine.
messages: Homodimer.
messages: Inhibited by oxalate.

3702:AT3G26935
gene id: 3702:AT3G26935
uniprot id: A0A178VAK5
uniprot id: Q0WQK2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cell membrane
messages: Membrane
messages: Palmitoyl acyltransferase.
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT3G04120
gene id: 3702:AT3G04120
uniprot id: A0A654F3Y9
uniprot id: P25858
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
messages: Cytoplasm
messages: Delayed growth, small siliques with defects in fertility, and alterations of seed and fruit development (PubMed:18820081). Reduced respiratory rates, pyruvate levels and Krebs cycle intermediates (PubMed:18820081). Increased reactive oxygen species levels (PubMed:18820081). The double mutant gapc1 gapc2 has an impaired ability to enhance heat tolerance of seedlings and to promote the expression of heat-inducible genes (PubMed:32651385).
messages: Expressed in leaves, stems and siliques and at lower levels in roots and flowers.
messages: Homotetramer (By similarity). Interacts with PLDDELTA (PubMed:22589465). Interacts with FBA6 and VDAC3 (PubMed:23316205). Binds to DPB3-1/NF-YC10 in response to heat-stress; this interaction promotes DPB3-1/NF-YC10 DNA-binding ability to its target promoter (PubMed:32651385).
messages: Inhibition by oxidized glutathione (GSSG), S-nitrosoglutathione (GSNO), hydrogen peroxide and sodium nitroprusside (SNP).
messages: Key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Essential for the maintenance of cellular ATP levels and carbohydrate metabolism. Required for full fertility (PubMed:18820081). Involved in response to oxidative stress by mediating plant responses to abscisic acid (ABA) and water deficits through the activation of PLDDELTA and production of phosphatidic acid (PA), a multifunctional stress signaling lipid in plants (PubMed:22589465). Associates with FBA6 to the outer mitochondrial membrane, in a redox-dependent manner, leading to binding and bundling of actin. Actin binding and bundling occurs under oxidizing conditions and is reversible under reducing conditions. May be part of a redox-dependent retrograde signal transduction network for adaptation upon oxidative stress (PubMed:23316205). Binds DNA in vitro. Together with DNA polymerase II subunit B3-1 (DPB3-1) and GAPC2, enhances heat tolerance and promotes the expression of heat-inducible genes (PubMed:32651385).
messages: Not repressed by darkness or sucrose.
messages: Nucleus
messages: Plants contain three types of GAPDH: NAD-dependent cytosolic forms which participate in glycolysis, NAD-dependent chloroplastic forms which participate in plastidic glycolysis and NADP-dependent chloroplastic forms which participate in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). All the forms are encoded by distinct genes.
messages: S-glutathionylation at Cys-156 in the presence of oxidized glutathione (GSSG). S-nitrosylation in the presence of S-nitrosoglutathione (GSNO) or sodium nitroprusside (SNP). These reactions may be both a protective mechanism against irreversible oxidation and a mean to store inhibited enzyme in a recoverable form. Glutathionylation is reversed by both glutaredoxins and thioredoxins in vitro.

3702:AT2G46970
gene id: 3702:AT2G46970
uniprot id: A0A178VNL3
uniprot id: A0A1P8AXC9
uniprot id: A0A1P8AXH8
uniprot id: Q8L5W8
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Etiolated seedlings.
messages: Expressed with a circadian rhythm showing peaks during the light period. Up-regulated by simulated shade in light-grown plants, in a phytochrome-dependent manner; low red/far-red ratio (R/FR) light, but repressed by a high R/FR light. Rapidly down-regulated after seedling deetiolation.
messages: Homodimer (Probable). Interacts with APRR1/TOC1.
messages: Nucleus
messages: Transcription factor. Involved in responses to transient and long-term shade. Required for the light-mediated inhibition of hypocotyl elongation. Necessary for rapid light-induced expression of the photomorphogenesis- and circadian-related gene APRR9. Seems to play a role in multiple PHYB responses, such as flowering transition and petiole elongation.

3702:AT1G12663
gene id: 3702:AT1G12663
uniprot id: A8MRP4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant thionin (TC 1.C.44) family.
messages: May be involved in plant defense.
messages: Secreted

3702:AT1G51970
gene id: 3702:AT1G51970
uniprot id: Q9ZU26
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G20650
gene id: 3702:AT5G20650
uniprot id: A0A178UL13
uniprot id: Q93VM8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.
messages: Highly expressed in leaves and stems and at lower levels in roots and flowers.
messages: Involved in the transport of copper.
messages: Membrane
messages: No change in expression levels after treatment with high concentrations of copper.

3702:AT5G36780
gene id: 3702:AT5G36780
uniprot id: P0DKC0
uniprot id: P0DKC1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant Proton pump-interactor protein family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: May regulate plasma membrane ATPase activity.

3702:AT3G46520
gene id: 3702:AT3G46520
uniprot id: A0A654FI89
uniprot id: P53497
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins.
messages: Belongs to the actin family.
messages: Displays particular expression in the root cap and pericycle tissues associated with lateral root development. Little or no reproductive-gene expression is detected in vegetative organs, such as stems, leaves, sepals and petals.
messages: Expressed primarily in pollen.
messages: Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. The binding of profilin to monomeric G-actin cause the sequestration of actin into profilactin complexes, and prevents the polymerization.
messages: There are 8 actin genes in A.thaliana.
messages: cytoskeleton

3702:AT4G37310
gene id: 3702:AT4G37310
uniprot id: Q9SW67
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT2G16800
gene id: 3702:AT2G16800
uniprot id: Q9SLD9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: In flowers, strongly expressed in mature pollen and ovules.
messages: Mostly expressed in leaves, stems and flowers, to a lower extent, in roots, floral bud, inflorescence and siliques, and, barely, in seedlings.
messages: Plastid membrane
messages: Together with CGF1, essential protein which supports female gametogenesis and embryogenesis, probably by securing local energy supply.
messages: Various vegetative defects, including reduced leaf size, dwarfism, and abnormal cell death (PubMed:32306898). Plants lacking both CGF1 and CGF2 are impaired for female gametogenesis and embryogenesis, and have abnormal leaf morphology with yellow patches associated with an altered chloroplast integrity; this phenotype is rescued by sucrose treatment (PubMed:32306898).
messages: chloroplast membrane

3702:AT1G58848
gene id: 3702:AT1G58848
uniprot id: P0DI17
uniprot id: P0DI18
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Potential disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT2G43140
gene id: 3702:AT2G43140
uniprot id: A0A178VYF7
uniprot id: A0A178W053
uniprot id: A0A384KJ01
uniprot id: F4IQ66
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G13080
gene id: 3702:AT4G13080
uniprot id: Q9SV61
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: May catalyze xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: apoplast
messages: cell wall

3702:AT1G62560
gene id: 3702:AT1G62560
uniprot id: A0A1P8APM2
uniprot id: Q9SXE1
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FMO family.
messages: Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates. Prefers probably short-chain methylthioalkyl glucosinolates in cv. Landsberg erecta.
messages: Down-regulated at late stage by auxin.
messages: In contrast to cv. Columbia, cv. Landsberg erecta has predominantly propyl C3 instead of butyl C4 Met-derived glucosinolates.
messages: Increased accumulation of methylthiopropyl glucosinolates in leaves and seeds.
messages: Membrane

3702:AT1G53240
gene id: 3702:AT1G53240
uniprot id: Q9ZP06
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organelle compartments (Probable). Required for carbon dioxide and energy partitioning in leaves. May limit photorespiration during the dark phase (PubMed:20876337, PubMed:27208265). Its activity is essential to shuttle reductants out from the mitochondria to support the photorespiratory flux (PubMed:26889011). Can convert 2-oxoglutarate to (S)-2-hydroxyglutarate in vitro (PubMed:26203119).
messages: Expressed in rosette leaves.
messages: Forms intramolecular disulfide bonds.
messages: Homodimer.
messages: Mitochondrion matrix
messages: Negatively regulated by ATP. Not redox-regulated. The formation of intramolecular disulfide bonds does not alter enzymatic activity.
messages: Slight reduction of rosette leaf size and reduction by 50 percents in fresh weight and seed production (PubMed:26889011). The double mutant plants mmdh1 and mmdh2 have decreased germination rate, grow slowly, are small, have increased photorespiration and die before producing seeds (PubMed:20876337).

3702:AT2G39725
gene id: 3702:AT2G39725
uniprot id: A0A178VU17
uniprot id: Q8VZU1
names: Similarity
messages: Belongs to the complex I LYR family. SDHAF1 subfamily.

3702:AT4G18360
gene id: 3702:AT4G18360
uniprot id: A0A1P8B993
uniprot id: O49506
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
messages: Catalyzes the oxidation of glycolate to glyoxylate, with a reduction of O2 to H2O2. Is a key enzyme in photorespiration in green plants.
messages: Homotetramer.
messages: Peroxisome

3702:AT5G48640
gene id: 3702:AT5G48640
uniprot id: A0A1P8BBV4
uniprot id: A0A654G975
uniprot id: Q9FJK6
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin C subfamily.

3702:AT4G30340
gene id: 3702:AT4G30340
uniprot id: A0A178UUX1
uniprot id: A0A1P8B509
uniprot id: F4JQ95
names: Function
names: Sequence Caution
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the eukaryotic diacylglycerol kinase family.
messages: Highly expressed in flowers, and at low levels in roots, stems and leaves.
messages: Intron retention.
messages: Monomer.
messages: Phosphorylates the second messenger diacylglycerol (DAG) to generate phosphatidic acid (PA), another important signaling molecule. PA is required for plant development and responses to abiotic stress and pathogen attack.
messages: Phosphorylates the second messenger diacylglycerol (DAG) to generate phosphatidic acid (PA), another important signaling molecule. PA is required for plant development and responses to abiotic stress and pathogen attack. May be involved in the accumulation of PA during cold stress xhibits high specificity for 1,2-dioleoyl-sn-glycerol (1,2-DOG), 1-palmitoyl, 2-oleoyl-sn-glycerol (1,2 POG), 1-stearoyl, 2-linoleoyl-sn-glycerol (1,2-SLG) and 1-oleoyl, 2-palmitoyl-sn-glycerol (1,2-OPG).

3702:AT3G11680
gene id: 3702:AT3G11680
uniprot id: A0A1I9LRV2
uniprot id: A0A654F692
uniprot id: Q9SRM9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Malate transporter.
messages: Membrane

3702:AT1G26460
gene id: 3702:AT1G26460
uniprot id: Q9FZD1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G22290
gene id: 3702:AT1G22290
uniprot id: F4I1B7
uniprot id: F4I1B8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 14-3-3 family.
messages: Nucleus

3702:AT1G14520
gene id: 3702:AT1G14520
uniprot id: A0A178W5G4
uniprot id: A0A1P8APC9
uniprot id: F4HW72
uniprot id: Q8L799
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the myo-inositol oxygenase family.
messages: Binds 2 iron ions per subunit.
messages: Catalyzes the oxygenative cleavage of myo-inositol to D-glucuronate. Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in plant ascorbate biosynthesis.
messages: Cytoplasm
messages: Expressed in roots, young leaves, stems, flowers and siliques.
messages: Incorporation of the inositol pathway-derived monosaccharides is strongly reduced in knockout AtMIOX1 seedling walls.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G06530
gene id: 3702:AT5G06530
uniprot id: A0A1P8BAZ0
uniprot id: A0A654FYZ0
uniprot id: B9DH73
uniprot id: Q93YS4
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: May be due to an intron retention.
messages: Membrane

3702:AT1G13280
gene id: 3702:AT1G13280
uniprot id: Q93ZC5
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the allene oxide cyclase family.
messages: Highly expressed in fully developed leaves.
messages: Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.
messages: Low local and systemic induction by wounding.
messages: The four allene oxide cyclase proteins (AOC1, AOC2, AOC3 and AOC4) are encoded by duplicated genes. They are very similar, and most experiments involving antibodies do not discriminate between the different members.
messages: chloroplast

3702:AT1G69190
gene id: 3702:AT1G69190
uniprot id: A0A654EMF2
uniprot id: Q1ENB6
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Catalyzes the first two consecutive steps of tetrahydrofolate biosynthesis (PubMed:17289662). Plays a role in seed stress response and survival (PubMed:17289662, PubMed:21996493).
messages: Expressed exclusively in reproductive tissues.
messages: Expressed in early stages of seed development, until the late globular stage of embryo. Not detected at the heart stage of embryo development.
messages: In the C-terminal section; belongs to the DHPS family.
messages: In the N-terminal section; belongs to the HPPK family.
messages: Inhibited by sulfanilamide.
messages: No visible phenotype (PubMed:17289662). Increased sensitivity to oxidative stress (PubMed:21996493).
messages: Up-regulated by slat stress (PubMed:17289662). Up-regulated by oxidative stress (PubMed:21996493).
messages: cytosol

3702:AT2G29480
gene id: 3702:AT2G29480
uniprot id: Q9ZW29
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT5G08350
gene id: 3702:AT5G08350
uniprot id: A0A178UNS7
uniprot id: Q9FTA0
names: Similarity
messages: Belongs to the GEM family.

3702:AT4G30140
gene id: 3702:AT4G30140
uniprot id: A0A178V2L8
uniprot id: Q9SZW7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT5G64080
gene id: 3702:AT5G64080
uniprot id: A0A178ULL1
uniprot id: Q8VYI9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Expressed in cotyledons, roots, stems, seedlings and inflorescences, but not in mature leaves.
messages: Membrane
messages: No obvious defects in morphology (PubMed:15215864). Plants lacking both XYP1 and XYP2 have morphological defects in vascular development; e.g. discontinuous and thicker veins with the improper interconnection of tracheary elements (TEs) (PubMed:15215864).
messages: Probable lipid transfer protein (By similarity). Proteoglycan-like factor that exhibits xylogen activity consisting in mediating local and inductive cell-cell interactions required for xylem differentiation (PubMed:15215864, PubMed:21558309).
messages: Strongly expressed in the cotyledons of embryos and of young seedlings (PubMed:21558309). In adult plants, present in anthers of flowers, in funicles of developing siliques and at the base of roots (PubMed:21558309).

3702:AT5G48605
gene id: 3702:AT5G48605
uniprot id: Q2V304
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT4G17300
gene id: 3702:AT4G17300
uniprot id: O48593
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Lethal. In heterozygous plants, aborted ovules.
messages: Mitochondrion
messages: chloroplast

3702:AT3G20910
gene id: 3702:AT3G20910
uniprot id: Q945M9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYA/HAP2 subunit family.
messages: Expressed in inflorescence, stems, flowers and siliques.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Nucleus
messages: Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.

3702:ArthCp020
gene id: 3702:ArthCp020
uniprot id: A0A1B1W4T5
uniprot id: P56804
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family.
messages: Binds 16S rRNA, required for the assembly of 30S particles.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3702:AT3G61900
gene id: 3702:AT3G61900
uniprot id: Q9M275
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G12210
gene id: 3702:AT5G12210
uniprot id: A0A178UAX0
uniprot id: A0A178UCS2
uniprot id: F4JZH8
uniprot id: Q84J75
names: Activity Regulation
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein prenyltransferase subunit beta family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2 (PubMed:26589801). Involved in the geranylgeranylation of RABA2A (PubMed:20180921). In vitro, can prenylate PGGTI targets with the C-terminal sequence Cys-aliphatic-aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the beta subunit is associated with the alpha subunit RGTA1 (PubMed:26589801).
messages: Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX.
messages: Heterotrimer composed of the alpha subunit RGTA, the beta subunit RGTB and REP; within this trimer, RGTA and RGTB form the catalytic component, while REP mediates peptide substrate binding.
messages: Pleiotropic effects on plant growth and development, including dwarf size, aberrant root development, multiple inflorescence stems and small siliques mostly sterile. Impaired shoot gravitropism and photomorphogenesis (PubMed:20180921). The double mutant plants rgtb1 and rgtb2 are male sterile, due to shrunken pollen with abnormal exine structure, and strong disorganization of the endoplasmic reticulum membranes (PubMed:25316062).
messages: Required for male fertility and root tip growth.
messages: The enzymatic reaction requires the aid of the Rab escort protein REP.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G59420
gene id: 3702:AT5G59420
uniprot id: Q93Y40
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the OSBP family.
messages: Expressed in roots, leaves, stems and flowers.
messages: May be involved in the transport of sterols.

3702:AT3G05290
gene id: 3702:AT3G05290
uniprot id: A0A178V9A1
uniprot id: Q9MA90
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Expressed in stamens, pollen grains, seeds, leaves, cotyledons, roots, stems, flowers, hypocotyls and siliques.
messages: Expressed in the early seedling stage of post-germinative growth.
messages: Membrane
messages: Peroxisomal adenine nucleotide transporter catalyzing the counterexchange of ATP with AMP. ATP is needed by reactions that generate acyl-CoA for peroxisomal fatty acid beta-oxidation during postgerminative growth. Required for the beta-oxidation reactions involved in auxin biosynthesis and for the conversion of seed-reserved triacylglycerols into sucrose that is necessary for growth before the onset of photosynthesis.
messages: Peroxisome membrane

3702:AT5G54220
gene id: 3702:AT5G54220
uniprot id: Q9FL73
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G37700
gene id: 3702:AT2G37700
uniprot id: A0A1P8B1Z1
uniprot id: A0A654F151
uniprot id: F4IR05
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Membrane
messages: Not detected in any tissues.

3702:AT5G50420
gene id: 3702:AT5G50420
uniprot id: A0A178UB35
uniprot id: Q9FK30
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT1G29690
gene id: 3702:AT1G29690
uniprot id: Q9C7N2
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the complement C6/C7/C8/C9 (TC 1.C.39) family.
messages: Constitutively activated HR-like cell death phenotype with endogenous accumulation of high levels of salicylic acid (SA) and constitutively activated defense phenotype against challenge with P.syringae. Dwarf plant with normal cotyledons, but dark brown- or black-colored cell death lesions on the true leaves.
messages: Mainly expressed in the vascular system.
messages: Negatively controls the salicylic acid (SA)-mediated pathway of programmed cell death in plant immunity.

3702:AT3G12610
gene id: 3702:AT3G12610
uniprot id: Q00874
names: Function
messages: This protein is able to complement bacterial recA mutations, but its native function in the plant is not known.

3702:AT1G03260
gene id: 3702:AT1G03260
uniprot id: A0A178WAG9
uniprot id: Q6NMJ6
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G15440
gene id: 3702:AT4G15440
uniprot id: B3LF83
names: Caution
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By wounding.
messages: Expressed in roots, leaves, flowers and siliques.
messages: In cv. Columbia, CYP74B2 (AC B3LF83) DNA sequence contains a 10-bp deletion that leads to a shorter N-terminus compared to typical other CYP74B subfamily members, and CYP74B2 is thought to be a non-functional enzyme. Functional alleles, with full N-terminus are found in cv. Landsberg erecta and cv. Wassilewskija (AC Q9ZSY9).

3702:AT3G25430
gene id: 3702:AT3G25430
uniprot id: A0A1I9LMH8
uniprot id: A0A7G2ERY2
uniprot id: Q8W4C3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs (By similarity).
messages: Belongs to the CAF1 family.
messages: Cytoplasm
messages: Nucleus

3702:AT5G53530
gene id: 3702:AT5G53530
uniprot id: A0A178UT36
uniprot id: Q9FJD0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VPS26 family.
messages: Component of the retromer complex which consists of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C), VPS5/17 (SNX1 or SNX2A or SNX2B). Component of a retromer subcomplex consisting of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C).
messages: Cytoplasm
messages: Endosome membrane
messages: Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane.
messages: Prevacuolar compartment membrane
messages: trans-Golgi network membrane

3702:AT2G07750
gene id: 3702:AT2G07750
uniprot id: O80792
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G70980
gene id: 3702:AT1G70980
uniprot id: Q9SSK1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: cytosol

3702:AT3G11630
gene id: 3702:AT3G11630
uniprot id: Q96291
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
messages: Down-regulated under highly reduced cellular thiol pool conditions. Down-regulated by ascorbate. Slightly induced by oxidative stress.
messages: Homodimer; disulfide-linked, upon oxidation (By similarity). Interacts with the plastidial thioredoxin CDSP32 (PubMed:12084836). Interacts with the plastidial NADPH-dependent thioredoxin reductase ANTR-C (PubMed:16884685).
messages: The active site is a conserved redox-active cysteine residue, the peroxidatic cysteine (C(P)), which makes the nucleophilic attack on the peroxide substrate. The peroxide oxidizes the C(P)-SH to cysteine sulfenic acid (C(P)-SOH), which then reacts with another cysteine residue, the resolving cysteine (C(R)), to form a disulfide bridge. The disulfide is subsequently reduced by an appropriate electron donor to complete the catalytic cycle. In this typical 2-Cys peroxiredoxin, C(R) is provided by the other dimeric subunit to form an intersubunit disulfide. The disulfide is subsequently reduced by thioredoxin CDSP32.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. May be an antioxidant enzyme particularly in the developing shoot and photosynthesizing leaf.
messages: chloroplast

3702:AT5G11920
gene id: 3702:AT5G11920
uniprot id: A0A178UGU8
uniprot id: A0A384KLF0
uniprot id: A0A654G0C5
uniprot id: F4JZE3
uniprot id: Q8W4S6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 6 and 1-fructan exohydrolase that can degrade both inulin and levan-type fructans, such as phlein, levan, neokestose, levanbiose, 6-kestose, 1-kestose, inulin, and 1,1-nystose.
messages: Belongs to the glycosyl hydrolase 32 family.
messages: Expressed in seedlings and leaves, and, to a lower extent, in flowers and seeds.
messages: Seems to not have any beta-fructofuranosidase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast
messages: cell wall

3702:AT3G53620
gene id: 3702:AT3G53620
uniprot id: A0A178VKC0
uniprot id: Q9LFF9
names: Activity Regulation
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PPase family.
messages: Catalyzes the irreversible hydrolysis of pyrophosphate (PPi) to phosphate. The MgPPi(2-) complex binds to the enzyme only after a free Mg(2+) ion has bound. No activity with glycerol-3-phosphate, glucose-6-phosphate, p-nitrophenylphosphate, ADP, NADP(+), NAD(+),NADH, NADPH or phosphoribosyl pyrophosphate as substrates.
messages: Cytoplasm
messages: Expressed throughout plant development, with a lower expression in young plantes and a maximum during flowering.
messages: Inhibited by Zn(2+), Ca(2+), Ba(2+), Fe(2+), Co(2+), Cu(2+), Eu(2+), Eu(3+) and Mn(2+).
messages: Monomer.
messages: Ubiquitous, excepted in pollen. Very low expression in cork, xylem and hypocotyls.

3702:AT1G74410
gene id: 3702:AT1G74410
uniprot id: Q8LBA0
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. NIP subfamily.
messages: May be involved in the early steps of the plant defense signaling pathway. Does not display E3 catalytic activity.
messages: Membrane
messages: Up-regulated by chitin.
messages: Was originally (PubMed:16557337) assigned as a member of the E3 ubiquitin-protein ligase ATL subfamily but does not display E3 catalytic activity (PubMed:16339806).

3702:AT5G17220
gene id: 3702:AT5G17220
uniprot id: Q9FE46
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: By the fungal pathogen Verticillium dahliae.
messages: Great reduction of anthocyanin pigments in the vegetative parts and brown pigments in the seed coat. Accumulation of unextractable proanthocyanidins.
messages: Involved in the transport and/or accumulation of both anthocyanins and proanthocyanidins (PA)s in the vacuole. Functions in the cytosol to maintain the regular accumulation in the vacuole of PA precursors, such as epicatechin and glycosylated epicatechin.
messages: cytosol

3702:AT3G16680
gene id: 3702:AT3G16680
uniprot id: A0A654F7V0
uniprot id: F4J2R9
names: Similarity
messages: Belongs to the archaeal Rpo5/eukaryotic RPB5 RNA polymerase subunit family.

3702:AT3G52370
gene id: 3702:AT3G52370
uniprot id: A0A1I9LLN6
uniprot id: A0A654FF47
uniprot id: Q9FT45
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: May be a cell surface adhesion protein.
messages: Secreted

3702:AT2G34430
gene id: 3702:AT2G34430
uniprot id: A0A654EYS2
uniprot id: Q39142
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT2G34960
gene id: 3702:AT2G34960
uniprot id: A0A178VPZ9
uniprot id: O64759
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Cationic amino acid transporter (CAT) (TC 2.A.3.3) family.
messages: Cell membrane
messages: Expressed in roots, stems, flowers, seeds, and leaves. Mostly present in leaf rims and cotyledons of developing seedlings.
messages: High-affinity permease involved in the transport of the cationic amino acids (e.g. arginine, and, to a lower extent, citrulline and glutamate). Transport mostly basic amino acids, and, to a lower extent neutral and acidic amino acids.
messages: Membrane

3702:AT3G23070
gene id: 3702:AT3G23070
uniprot id: F4J2U9
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
messages: Albino seeds that fail to germinate or yield very slow-growing seedlings and stunted plants. The seeds of the double mutant plants cfm3a-4 and cfm3b-2 fail to germinate.
messages: Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3A and CAF1 or CAF2. Required for seed development. May influence the biogenesis of the mitochondrial small ribosomal subunit.
messages: Interacts with RNA. Part of large ribonucleo-protein particles that contain CAF1 and/or CAF2, and RNC1.
messages: Mitochondrion
messages: Sequencing errors.
messages: chloroplast

3702:AT1G12160
gene id: 3702:AT1G12160
uniprot id: Q9FWW6
names: Function
names: Similarity
messages: Belongs to the FMO family.
messages: Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

3702:AT5G19650
gene id: 3702:AT5G19650
uniprot id: A0A654G304
uniprot id: Q3E9B4
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots, rosette and cauline leaves, shoots, stems, flower buds and siliques.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Plants over-expressing OFP8 show flat, thick and cyan leaves, and enhanced apical dormancy.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT5G57520
gene id: 3702:AT5G57520
uniprot id: Q39261
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Highly expressed at in the abscission zone (AZ) of petals, stamens, sepals and siliques. Expressed at lower levels in stamens, carpels, cotyledons, major veins of rosette leaves, trichomes of inflorescence leaves and stems.
messages: Interacts with DOF4.7.
messages: Nucleus
messages: Plants over-expressing ZFP2 fail in the abscission of floral organs (sepals, petals and stamens) after anthesis.
messages: Probable transcription factor involved in the regulation of floral organ abscission. Participates in processes that directly or indirectly influence shedding of floral organs.

3702:AT5G08310
gene id: 3702:AT5G08310
uniprot id: P0C8Q6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:ArthCp016
gene id: 3702:ArthCp016
uniprot id: A0A1B1W4T8
uniprot id: P62109
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsbM family.
messages: Membrane
messages: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
messages: PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.
messages: chloroplast thylakoid membrane

3702:AT4G08485
gene id: 3702:AT4G08485
uniprot id: Q2V3K7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G49690
gene id: 3702:AT5G49690
uniprot id: Q9LTA3
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G69230
gene id: 3702:AT1G69230
uniprot id: Q9LE54
names: Function
names: Similarity
names: Tissue Specificity
messages: Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
messages: Belongs to the SPIRAL1 family.
messages: Ubiquitous.

3702:AT5G16900
gene id: 3702:AT5G16900
uniprot id: C0LGT5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT3G47430
gene id: 3702:AT3G47430
uniprot id: Q9STY0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-11 family.
messages: Expressed in roots, leaves and developing siliques.
messages: Homooligomer. Interacts with ARC5 and FIS1B on peroxisomes.
messages: In seedlings by transition from dark to light. Up-regulated during senescence.
messages: Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.
messages: Peroxisome membrane

3702:AT5G49830
gene id: 3702:AT5G49830
uniprot id: F4K7F4
uniprot id: F4K7F5
uniprot id: Q9LTB0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EXO84 family.
messages: Cell membrane
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall. Probable component of an exocyst subcomplex specifically involved in autophagy-related, Golgi-independent membrane traffic to the vacuole. Regulates autophagosome formation and autophagy-related Golgi-independent import into the vacuole. Mediates ABCG36/PEN3 outer-membrane polarity at the periphery of lateral root cap and root epidermal cells (PubMed:27803190).
messages: Sterile plants with extreme dwarf phenotype and cytokinetic defects, and accumulation of vesicles in leaf epidermal cells (PubMed:20870962). Impaired trafficking and endocytic recycling of ABCG36/PEN3 between the trans-Golgi network and the plasma membrane in root epidermal and cap cells leading to a strong intracellular accumulation of ABCG36/PEN3 and lost ABCG36/PEN3 outer lateral plasma membrane polarity (PubMed:27803190).
messages: The exocyst complex is composed of SEC3, SEC5, SEC6, SEC8, SEC10, EXO70A1 and EXO84B. Interacts with SEC6, SEC10, SEC15B and EXO70A1. Interacts with EXO70B1.
messages: cell wall
messages: cytosol
messages: perinuclear region
messages: phragmoplast

3702:AT1G22160
gene id: 3702:AT1G22160
uniprot id: A0A178WCZ5
uniprot id: Q8VY80
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FLZ family.
messages: Cytoplasm
messages: Down-regulated in response to mild as well as prolonged energy depletion (PubMed:26442059). Up-regulated by glucose, sucrose and mannose (PubMed:26442059).
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:24600465, PubMed:29945970). Interacts with KINB3 via its N-terminal part (PubMed:29945970). Interacts with DELLA proteins GAI and RGA (Ref.9).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.
messages: Nucleus

3702:AT1G33800
gene id: 3702:AT1G33800
uniprot id: A0A178W7W0
uniprot id: Q9LQ32
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily.
messages: Expressed in hypocotyls, roots, rosette leaves, stems and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Methyltransferase catalyzing 4-O-methylation of glucuronic acid side chains on xylan.
messages: No visible phenotype; due to the redundancy with GXM1 and GXM2. Reduced levels of methylated glucuronic acids. Gxm2 and gxm3 double mutants show reduced stem mechanical strength.
messages: Up-regulated during secondary cell wall deposition.

3702:AT5G01540
gene id: 3702:AT5G01540
uniprot id: Q9M021
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Involved in negative regulation of abscisic acid response in seed germination.
messages: Involved in resistance response to the pathogenic bacteria Pseudomonas syringae.
messages: Slight enhancement in abscisic acid-inhibited germination. Redundant with LECRKA4.2 and LECRKA4.3.
messages: Strongly expressed in the vascular system and trichomes of the leaves. Also expressed in guard cells, anthers, stigmas and germinating seeds, but not found in petals or roots. Increased susceptibility to the bacteria Pseudomonas syringae, characterized by stronger necrotic symptoms and higher bacterial proliferation (PubMed:25083911).

3702:AT4G00165
gene id: 3702:AT4G00165
uniprot id: A0A654FKI3
uniprot id: Q8RW93
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family. PEARLI1 subfamily.
messages: Secreted

3702:AT3G10870
gene id: 3702:AT3G10870
uniprot id: Q9SG92
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the AB hydrolase superfamily. Methylesterase family.
messages: Expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem.
messages: Longer hypocotyls when grown in presence of exogenous MeIAA.
messages: Methylesterase that efficiently and specifically hydrolyzes methyl indole-3-acetic acid (MeIAA) to IAA (auxin). MeIAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect.

3702:AT4G32770
gene id: 3702:AT4G32770
uniprot id: Q94FY7
names: Function
names: Subcellular Location Annotation
messages: Involved in the synthesis of both tocopherols and tocotrienols (vitamin E), which presumably protect photosynthetic complexes from oxidative stress. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone and 2,3-dimethyl-5-phytyl-1,4-hydroquinone (DMPQ) to delta- and gamma-tocopherol respectively. Converts also 2,3-dimethyl-5-geranylgeranyl-1,4-hydroquinone (DMGQ) to gamma-tocotrienol.
messages: plastoglobule

3702:AT1G20890
gene id: 3702:AT1G20890
uniprot id: A0A178W5M2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G07005
gene id: 3702:AT3G07005
uniprot id: A0A178VJQ8
uniprot id: P82758
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G20030
gene id: 3702:AT2G20030
uniprot id: Q9SL78
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT2G29020
gene id: 3702:AT2G29020
uniprot id: A0A178VSC3
uniprot id: O81071
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G04280
gene id: 3702:AT1G04280
uniprot id: Q0WUY1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with calmodulin (CaM) in a calcium Ca(2+)-dependent manner in vitro.
messages: Mitochondrion outer membrane
messages: No visible phenotype under normal growth conditions.
messages: Phosphorylates NAD(+) to produces NADP(+) in a calmodulin calcium-dependent manner (PubMed:31554701). Does not possess activity toward NADH (PubMed:31554701). Has broad specificity for the phosphoryl donor, as ATP, CTP, GTP and UTP can be used interchangeably and produce similar efficiencies (PubMed:31554701). May play a role in producing NADP(H) needed to regulate the elicitor-induced reactive oxygen species (ROS) burst by sustaining the activity of NADPH oxidases (PubMed:31554701). Does not seem to play a role in photosynthesis-driven growth (PubMed:31554701).

3702:AT3G47360
gene id: 3702:AT3G47360
uniprot id: Q9STY7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Membrane

3702:AT3G26900
gene id: 3702:AT3G26900
uniprot id: A0A5S9XG43
uniprot id: Q9LW20
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Albino plants.
messages: Belongs to the shikimate kinase family.
messages: Required for chloroplast biogenesis.
messages: SKL1 does not possess shikimate kinase activity in vitro probably because it lacks the conserved active sites and substrate binding sites of the shikimate kinase family.
messages: chloroplast

3702:AT1G61300
gene id: 3702:AT1G61300
uniprot id: O64790
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the disease resistance NB-LRR family.
messages: Cell membrane
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT5G02110
gene id: 3702:AT5G02110
uniprot id: Q9LZM0
names: Similarity
messages: Belongs to the cyclin family. Cyclin D subfamily.

3702:AT1G71696
gene id: 3702:AT1G71696
uniprot id: A0A654EPP8
uniprot id: F4IA17
uniprot id: Q9M9H7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase M14 family.
messages: Binds 1 zinc ion per subunit.
messages: Endosome membrane
messages: Expressed in roots, shoots, leaves, flowers and siliques.
messages: Possesses in vitro carboxypeptidase activity against the C-terminal arginine and lysine residues. Involved in the maturation of CLE19. Removes the C-terminal arginine residue of CLE19 proprotein. The cleavage of the C-terminal arginine residue is necessary for CLE19 activity in vivo. Is not involved in generating active CLV3 (PubMed:24118638). Is not involved in CLE19 or CLV3 perception (PubMed:12932329, PubMed:24118638).

3702:AT3G63440
gene id: 3702:AT3G63440
uniprot id: Q9LY71
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.
messages: Expressed during the maturation phase of stomatal guard cells but not in fully mature stomata. In the root vasculature, detected soon after germination, with a maxima around the lateral root primordia.
messages: Expressed in the vascular system of roots, of young growing leaves and of the most apical portion of the growing stem. No expression in the root apical meristem. In flowers, restricted to the vascular bundles and transmitting tissue of developing gynoeciae.
messages: extracellular space

3702:AT5G42810
gene id: 3702:AT5G42810
uniprot id: Q93YN9
names: Biotechnology
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the IPK1 type 2 family.
messages: Binds 1 zinc ion per subunit.
messages: Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate). Phytate is a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate store in plant seeds. Also phosphorylates Ins(1,3,4,6)P4 and Ins(1,4,5,6)P4 to produce Ins(1,2,3,4,6)P5 and Ins(1,2,4,5,6)P5.
messages: Strongly expressed in leaves and cauline leaves. Weakly expressed in siliques and flowers. In flower, it is expressed in the major organs of developing flower buds. Strongly expressed in sepals, petals, in the male and female organs of immature and mature flower buds. Strongly expressed in the gynoecium and carpels which are fused to form the gynoecium. Also expressed in the transmitting tissue and ovules.
messages: The EXKPK motif is conserved in inositol-pentakisphosphate 2-kinases of both family 1 and 2.
messages: The gene coding for this protein might be inactivated to commercially produce plants with phytate-free grain. Indeed, while the role of phytate (InsP6) accumulation in seeds is unknown, it causes nutritional and environmental problems, partly due to the inability of monogastric animals to digest it.

3702:AT1G11610
gene id: 3702:AT1G11610
uniprot id: F4I8Y7
uniprot id: Q9SAB6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT5G46180
gene id: 3702:AT5G46180
uniprot id: Q9FNK4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
messages: By salt stress in young plants. Up-regulated during low water potential. Induced upon non-host pathogen infection.
messages: Homotetramer.
messages: Mediates degradation of arginine for nitrogen recycling. Plays a role in non-host disease resistance by regulating pyrroline-5-carboxylate metabolism-induced hypersensitive response.
messages: Mitochondrion matrix
messages: Unable to use arginine or ornithine as nitrogen source. Displays sensitivity against type II non-host pathogen infection.

3702:AT1G77300
gene id: 3702:AT1G77300
uniprot id: F4I6Z9
uniprot id: Q2LAE1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
messages: Early flowering. Pleiotropic developmental effects including dwarf and bushy phenotype, reduced seed setting and defects in ovule and embryo sac development (PubMed:18070919, PubMed:19915673, PubMed:24838002). Altered responses to brassinosteroid (BR) (PubMed:24838002).
messages: Histone methyltransferase involved in di and tri-methylation of 'Lys-36' of histone H3 (H3K36me2 and H3K36me3). Binds to H3 already mono- or di-methylated on 'Lys-4'(H3K4me1 or H3K4me2), but not to H3K4me3. H3K4me and H3K36me represent specific tags for epigenetic transcriptional activation. Regulates positively FLC transcription to prevent early flowering transition. Required for flowering transition in response to vernalization and for the maintenance of FLC expression in late embryos, but dispensable for the initial reactivation in early embryos during reprogramming. Seems also to modulate several traits including floral organ size, root size and dormancy. Promotes apical dominance (PubMed:16299497, PubMed:10518493, PubMed:16258034, PubMed:18070919, PubMed:19915673, PubMed:20711170). Directly involved in the tri-methylation of 'Lys-36' of histone H3 (H3K36me3) at LAZ5 chromatin to maintain a transcriptionally active state of LAZ5, a TIR-NB-LRR protein involved in innate immunity (PubMed:20949080). Required for brassinosteroid (BR)-induced gene expression and histone H3 trimethylation on 'Lys-36' (H3K36me3) in BR-regulated genes (PubMed:24838002).
messages: Interacts with FRI and SUF4, two components of the transcription activator complex FRI-C, and with SWC6, a component of the SWR1 chromatin-remodeling complex (PubMed:20711170, PubMed:21282526, PubMed:21522130). Interacts with BZR2/BES1 and IWS1 (PubMed:24838002).
messages: Not regulated by vernalization.
messages: Nucleus
messages: Ubiquitous, with higher levels in young tissues, including shoot and root apex. Expressed in ovules, tapetum layer and microspores.
messages: centromere

3702:AT2G15280
gene id: 3702:AT2G15280
uniprot id: Q6NPD8
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3702:AT4G23600
gene id: 3702:AT4G23600
uniprot id: A0A654FS54
uniprot id: F4JP99
uniprot id: Q9SUR6
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: CORI3 was initially isolated by Lopukhina et al (PMID:11500565) as tyrosine aminotransferase (TAT). The authors also measured a TAT activity in vitro, even though relatively weak. Jones et al (PMID:12525491) showed that CORI3 possesses cystine lyase (CL) activity, but lacks TAT activity in vitro. In addition, CL activity is not inhibited by saturation of L-tyrosine in the medium. As CORI3 should bind L-tyrosine to catalyze TAT activity, this excludes a TAT activity for CORI3. Jones et al. made the statment that TAT activity resulted probably from residual native TAT-catalyzing proteins present in the purified preparations employed by Loupokhina et al.
messages: Expressed in cotyledons, sepals, pistils, flower buds, phloem companion cells and vascular tissues of petiole, leaf, filament and fruit.
messages: Homodimer.
messages: Induced by jasmonate (PubMed:11500565, PubMed:9342878). Induced by coronatine (PubMed:11500565, PubMed:16008101). Induced by 12-oxo-phytodienoic acid (OPDA) (PubMed:11500565). Induced by wounding (PubMed:11500565, PubMed:9342878, PubMed:18247047). Induced by abscisic acid (ABA) (PubMed:9342878). Induced by the cell wall elicitin from the non-pathogenic biocontrol agent Pythium oligandrum (PubMed:19304739).
messages: Induction by wounding requires COI1.
messages: Possesses cystine lyase activity in vitro. Does not possess tyrosine aminotransferase, alanine aminotransferase, aspartate aminotransferase and tryptophan aminotransferase activities.

3702:AT2G31900
gene id: 3702:AT2G31900
uniprot id: A0A1P8AXI6
uniprot id: A0A1P8AXI9
uniprot id: A0A1P8AXP2
uniprot id: A0A5S9X337
uniprot id: F4IRU3
names: Caution
names: Domain
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily.
messages: Homodimer.
messages: IQ domain mediates interaction with calmodulin.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity).
messages: Preferentially expressed in stems.
messages: The tail domain is a globular cargo-binding domain.

3702:AT3G20290
gene id: 3702:AT3G20290
uniprot id: A0A178VAZ5
uniprot id: Q94CF0
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. EHD subfamily.
messages: By salinity stress.
messages: Cell membrane
messages: Cytoplasm
messages: Early flowering in short-day growth conditions (PubMed:18547399). Slightly slower endocytosis with delayed internalization (PubMed:18547399, PubMed:23342166). Reduced Brefeldin A sensitivity (PubMed:23342166).
messages: Endosome membrane
messages: Homooligomer, and heterooligomer with EHD2.
messages: Involved in endocytosis positive regulation. Acts in early endocytic membrane fusion and membrane trafficking of recycling endosomes (PubMed:18547399, PubMed:23342166). Confers salt tolerance (PubMed:23342166).
messages: The EH domain (1-93) is critical for vesicular localization.

3702:AT1G29080
gene id: 3702:AT1G29080
uniprot id: Q9LP39
names: Similarity
messages: Belongs to the peptidase C1 family.

3702:AT2G43290
gene id: 3702:AT2G43290
uniprot id: O22845
names: Function
names: Induction
names: Similarity
messages: Belongs to the calmodulin family.
messages: By touch and during darkness conditions.
messages: Potential calcium sensor.

3702:AT5G45880
gene id: 3702:AT5G45880
uniprot id: Q680L9
names: Similarity
messages: Belongs to the Ole e I family.

3702:AT3G15095
gene id: 3702:AT3G15095
uniprot id: A0A384K8R0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G51035
gene id: 3702:AT1G51035
uniprot id: A0A178WBQ6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G20900
gene id: 3702:AT5G20900
uniprot id: Q9C5K8
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Acetylated by Pseudomonas syringae HopZ1a.
messages: (Microbial infection) Interacts with the pathogenic Pseudomonas syringae HopZ1a protein.
messages: (Microbial infection) Triggered to degradation by the pathogenic Pseudomonas syringae HopZ1a protein in a COI1-dependent manner, thereby activating host jasmonate signaling.
messages: Belongs to the TIFY/JAZ family.
messages: Interacts with MYC2, AFPH2/NINJA, TIFY10A/JAZ1, TIFY10B/JAZ2, TIFY11A/JAZ5, TIFY11B/JAZ6, TIFY5A/JAZ8 and TIFY9/JAZ10.
messages: Nucleus
messages: Repressor of jasmonate responses.
messages: The jas domain (139-163) is required for interaction with COI1 and Pseudomonas syringae HopZ1a.
messages: Ubiquitinated. Targeted for degradation by the SCF(COI1) E3 ubiquitin ligase-proteasome pathway during jasmonate signaling.
messages: Up-regulated by wounding and herbivory.

3702:AT4G40030
gene id: 3702:AT4G40030
uniprot id: A0A384KRT1
uniprot id: A0A654FX83
uniprot id: A8MRL0
uniprot id: B9DGR9
uniprot id: P59169
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Can be acetylated to form H3K9ac, H3K14ac, H3K18ac and H3K23ac. H3K9ac could compete with H3K9me and prevent gene silencing. H3K9acK14ac molecules are 30-fold less abundant than H3K9ac or H3K14ac. Very low level of H3K9meK14ac. H3K14 is specifically acetylated by HAG1 and deacetylated by HDA6. H3K9ac is deacetylated by HDT1. H3K9ac is restricted to euchromatin. H3K18ac, but not H3K9ac, is cell-cycle dependent and linked to replication. Reduced H4R3me2s increases H3K14ac in the FLC chromatin and activates or maintains its transcription. Vernalization decreases H3K9/14ac in the promoter region of FLC.
messages: Chromosome
messages: Expressed in a replication-independent manner. Strong expression in the generative cell of early bicellular pollen, but not detected in late bicellular and tricellular pollen.
messages: In meta- and anaphase, H3T11ph is found on the entire length of the condensed chromosomes, whereas H3S10ph and H3S28ph are confined to the pericentromeric regions. During the first meiotic division, H3S10ph and H3S28ph are found on the entire length of the chromosome. Both sites may be involved in sister chromatid cohesion. No phosphorylation detected during interphase. AUR1 and AUR2 phosphorylate only H3S10, while AUR3 phosphorylates both H3S10 and H3S28.
messages: Mono-, di- or trimethylated to form mainly H3K4me1/2/3, H3K9me1/2/3 and H3K36me1/2/3. Very low monomethylation at H3K18me1 or H3K23me1. H3K4me1/2/3, H3K9me3, H3K27me3 and H3K36me1/2/3 are typical marks for euchromatin, whereas heterochromatic chromocenters are enriched in H3K9me1/2 and H3K27me1/2. H3K27me3 is largely restricted to the transcribed regions of single genes and not associated with low-nucleosome density regions. SUVR1 to SUVR5, ASHH1 to ASHH3 and ASHR1 to ASHR3 methylate H3, with ASHH2 methylating specifically H3K4 and H3K36. Monomethylation at H3K27me1 by ATXR5/6 is inhibited by the presence of Thr-32. The Su(var)3-9 homolog proteins (SUVH1 to SUVH10) are H3K9-specific methyltransferases. Among them, KRYPTONITE (SUVH4) is only involved in di- or trimethylation. Regarding H3K9, the major forms are H3K9me1 (20%) and H3K9me2 (10%), while H3K9me3 is rare (0.2%). H3K9me is controlled by DNA methylation and is not required for the formation of constitutive heterochromatin, but double methylation H3K9meK27me is required for the recruitment of CMT3 to methylate heterochromatin and silence euchromatic loci. Very low level of H3K9meK14ac. 36% of H3K27 is found under the form of H3K27me1 and 6% of H3K27me2, with no detectable H3K27me3. 6% of H3K36 is found under the form of H3K36me1, 15% of H3K36me2 and 3% of H3K36me3. H3K27me2K36me1 is found in 15% of the proteins while H3k27me1K36me2 is not detected. H2BK143ub1 is probably prerequisite for H3K4me. Elevated H3K4me3 and H3K36me2 formed by ASHH2 are required for high FLC expression. Vernalization increases H3K9me2 and H3K27me2/3 and decreases H3K4me2 at the FLC locus, resulting in the epigenetic silencing of this floral repressor.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. The H3K9meK27me dimethylated N-terminal tail of histone H3 can directly interact with the chromodomains of CMT3 and/or LHP1. Interacts with AHL27. Binds to HIRA (PubMed:25086063).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4me1/2/3 = mono-, di- and trimethylated Lys-5; H3K9me1/2/3 = mono-, di- and trimethylated Lys-10; H3K9ac = acetylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14ac = acetylated Lys-15; H3K18ac = acetylated Lys-19; H3K18me1 = monomethylated Lys-19; H3K23ac = acetylated Lys-24; H3K23me1 = monomethylated Lys-24; H3K27me1/2/3 = mono-, di- and trimethylated Lys-28; H3S28ph = phosphorylated Ser-29; H3K36me1/2/3 = mono-, di- and trimethylated Lys-37.
messages: Ubiquitous.
messages: Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: nucleolus

3702:AT3G46613
gene id: 3702:AT3G46613
uniprot id: A0A654FHF4
uniprot id: Q6IM86
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT5G58000
gene id: 3702:AT5G58000
uniprot id: A0A178UL80
uniprot id: A0A384LMB4
uniprot id: Q56X72
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G02770
gene id: 3702:AT3G02770
uniprot id: A0A384L0L2
uniprot id: Q67Y35
uniprot id: Q9M8R9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class II aldolase/RraA-like family.
messages: Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity).
messages: Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
messages: Divalent metal cation.
messages: Homotrimer.

3702:AT4G20600
gene id: 3702:AT4G20600
uniprot id: A0A178UZA6
uniprot id: P0CJ49
uniprot id: P0CJ50
uniprot id: P0CJ51
uniprot id: P0CJ52
uniprot id: P0CJ53
uniprot id: P0CJ54
uniprot id: P0CJ55
uniprot id: P0CJ56
uniprot id: P0CJ57
uniprot id: P0CJ58
uniprot id: P0CJ59
uniprot id: P0CJ60
uniprot id: P0CJ61
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G03776
gene id: 3702:AT3G03776
uniprot id: A0A384KCB3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G57870
gene id: 3702:AT3G57870
uniprot id: A0A178V9H0
uniprot id: Q42551
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Embryonic lethal.
messages: Interacts with SIZ1 (via PHD domain) and MMS21 (PubMed:18502747, PubMed:19682286). Interacts with TCP14 and TCP15 (PubMed:29250092). Interacts with KIN10 (PubMed:20855607, PubMed:26662259).
messages: SUMO-conjugating enzyme that accepts the SUMO proteins from the E1 SUMO-activating heterodimer SAE1/SAE2 and catalyzes its covalent attachment to other proteins with the E3 SUMO ligases SIZ1 and MMS21. Associates with SIZ1 for sumoylation of the transcription factor GTE3.

3702:AT2G26975
gene id: 3702:AT2G26975
uniprot id: Q8GWP3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.
messages: Involved in the transport of copper.
messages: Membrane

3702:AT4G28088
gene id: 3702:AT4G28088
uniprot id: A0A178UWL7
uniprot id: F4JKH9
names: Similarity
messages: Belongs to the UPF0057 (PMP3) family.

3702:AT3G19940
gene id: 3702:AT3G19940
uniprot id: A0A178VHL3
uniprot id: Q9LT15
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Expressed in primordia of lateral roots, pollinated stigmata, and pollen tubes.
messages: Hexose-H(+) symporter that catalyzes the high-affinity uptake of glucose, galactose and mannose (PubMed:26893494). Proton-coupled symporter responsible for the uptake of glucose from the apoplast into the cells (Probable).
messages: Induced under low-glucose conditions in pollen tubes (PubMed:26893494). Down-regulated by glucose (PubMed:26893494).
messages: Membrane
messages: No visible phenotype under normal growth conditions.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G21580
gene id: 3702:AT2G21580
uniprot id: A0A178VWT5
uniprot id: F4IHJ8
uniprot id: Q9SIK2
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS25 family.

3702:AT4G17870
gene id: 3702:AT4G17870
uniprot id: A0A5S9XTK0
uniprot id: O49686
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Homodimer (PubMed:21658606,PubMed:19898494,PubMed:19933100). Binds ABA on one subunit only. Interacts with HAB1, AHG3, ABI1 and ABI2 when complexed to ABA, and possibly with other PP2Cs (PubMed:19407142, PubMed:19874541, PubMed:19898420, PubMed:19898494, PubMed:19933100). Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (PubMed:26719420). Interacts directly with CAR1 and CAR4 (PubMed:25465408, PubMed:26719420). Interacts with CARK1 in the cytosol (PubMed:29928509, PubMed:19407142, PubMed:19874541, PubMed:19898420, PubMed:19898494, PubMed:19933100, PubMed:21658606, PubMed:25465408, PubMed:26719420). Interacts with AIP1 in an abscisic acid-dependent manner (PubMed:29928509). Interacts with FREE1 (via N-terminus) (PubMed:27495812). Interacts with the E3 ubiquitin-protein ligase RSL1 at the plasma membrane (PubMed:25330042).
messages: Membrane
messages: Nucleus
messages: Phosphorylated by CARK1 especially in response to abscisic acid (ABA); this phosphorylation promotes its stability and inhibitory ability to ABI1.
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA (PubMed:19407142, PubMed:19624469, PubMed:19769575, PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015). Promotes drought tolerance (PubMed:29970817).
messages: The synthetic growth inhibitor pyrabactin inhibits ABA-binding and subsequent PP2Cs inhibitor properties.
messages: Ubiquitynated and degraded by the proteasome upon binding to the E3 ubiquitin-protein ligase RSL1 at the plasma membrane.
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.
messages: Vacuole
messages: cytosol

3702:AT1G59820
gene id: 3702:AT1G59820
uniprot id: A0A178WFR7
uniprot id: Q9XIE6
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Associates with ALIS1 to form a stable and active complex. Interacts with ALIS3 and ALIS5 in a heterologous system.
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
messages: Endoplasmic reticulum membrane
messages: Expressed in petals and sepals, but not in reproductive tissues. In siliques, detected in the upper part of the seed pod and in the area between the seed pod and the stem, but not in developing seeds. Strong expression in vascular shoot tissues and in stomatal guard cells of young rosettes leaves. In roots, expressed in cells surrounding the xylem and in central and peripheral columella cells. Detected in developing and mature trichomes, roots, pollen and growing pollen tubes.
messages: Golgi apparatus membrane
messages: Impaired growth of roots and shoots (PubMed:18344284, PubMed:23667493, PubMed:28434950). Roots devoided of the characteristic trans-Golgi proliferation of slime vesicles containing polysaccharides and enzymes for secretion (PubMed:18344284). Aberrant trichome expansion, reduced primary root growth and longer root hairs (PubMed:19566596, PubMed:28434950). Impaired pollen growth (PubMed:19566596, PubMed:23667493, PubMed:28434950). Impaired ovule development (PubMed:23667493, PubMed:28434950). Reduced adaptability to temperature stresses (PubMed:23667493). Abnormal accumulation of ABCG36/PEN3 in endomembrane compartments, likely in the trans-Golgi network, instead of plasma membrane (PM), due to an impaired endocytic trafficking of the ABCG36/PEN3 transporter, thus causing delays in ABCG36/PEN3 recruitment to the host-pathogen interface upon infection by powdery mildews (e.g. Blumeria graminis) within papillae and in response to pathogenic bacteria (e.g. Pseudomonas syringae) or pathogen-associated molecular patterns (PAMPs) (e.g. flg22 and chitin) (PubMed:28434950).
messages: Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid (PubMed:18344284, PubMed:19566596, PubMed:20053675). Modifies endomembranes in multiple cell types, enabling structural changes, or signaling functions that are critical for normal development and adaptation to varied growth environments (PubMed:23667493). Required for the trafficking and endocytic recycling of ABCG36/PEN3 between the trans-Golgi network and the plasma membrane; thus promoting ABCG36/PEN3 recruitment to the host-pathogen interface upon infection by powdery mildews (e.g. Blumeria graminis) and bacteria (e.g. Pseudomonas syringae), or upon the detection of pathogen-associated molecular patterns (PAMPs) (e.g. flg22 and chitin) (PubMed:28434950).
messages: Membrane
messages: The intracellular targeting signals and lipid specificity determinants reside in the catalytic ALA subunit.

3702:AT1G13170
gene id: 3702:AT1G13170
uniprot id: F4HP28
uniprot id: Q9SAF0
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the OSBP family.
messages: Expressed in roots, leaves, stems and flowers.
messages: May be involved in the transport of sterols.

3702:AT1G79260
gene id: 3702:AT1G79260
uniprot id: O64527
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the nitrobindin family.
messages: Binds 1 heme b group per subunit, that coordinates a highly solvent-exposed Fe(III) atom.
messages: Cytoplasm
messages: Forms a 10-stranded antiparallel beta-barrel structure able to accommodate a hydrophobic ligand in its interior. In fact, this fold hosts the heme group, which is located in a wide surface cleft.
messages: Heme-binding protein able to scavenge peroxynitrite and to protect free L-tyrosine against peroxynitrite-mediated nitration, by acting as a peroxynitrite isomerase that converts peroxynitrite to nitrate. Therefore, this protein likely plays a role in peroxynitrite sensing and in the detoxification of reactive nitrogen and oxygen species (RNS and ROS, respectively) (PubMed:32295384). Is able to bind nitric oxide (NO) in vitro, but may act as a sensor of peroxynitrite levels in vivo (PubMed:32295384, PubMed:19938152).
messages: Homodimer.

3702:AT5G35940
gene id: 3702:AT5G35940
uniprot id: Q9FGC5
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT3G10670
gene id: 3702:AT3G10670
uniprot id: Q9CAF5
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCI family.
messages: During seed development, first expressed in developing endosperm, embryo and suspensor and later restricted to the embryo. In seedlings, confined to apical meristems and vascular tissues. In flowers, mostly present in floral meristem, in filaments of the stamen and in the style.
messages: Essential protein. Required during embryo development, especially at early stages. Involved in chloroplast differentiation.
messages: Interacts with NAP6.
messages: Present in all organs, with higher levels in aerial parts.
messages: chloroplast

3702:AT3G48290
gene id: 3702:AT3G48290
uniprot id: F4JDX0
uniprot id: Q9STK9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G27890
gene id: 3702:AT1G27890
uniprot id: A0A7G2DW67
uniprot id: Q9C6M9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.

3702:AT2G13560
gene id: 3702:AT2G13560
uniprot id: A0A178VZ17
uniprot id: Q9SIU0
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates during the night period (at protein level).
messages: Activated by oxaloacetate (OAA), 2-ketoglutarate, succinate and fumarate as homodimer and by OAA, 2-ketoglutarate, succinate, fumarate and coenzyme A (acetyl-CoA and CoA) as heterodimer NAD-MEH.
messages: Belongs to the malic enzymes family.
messages: Divalent metal cations. Prefers magnesium or manganese.
messages: Expressed in leaves, stems, flowers, and roots (at protein level).
messages: Homodimer. Heterodimer of two related subunits in NAD-MEH complex. Interacts with NAD-ME2.
messages: In flowers, mostly present in sepals, stigmatic papillae, gynoecium (apical part) and filaments. Excluded from anthers (at protein level). In developing siliques, localized in the apical part and the abscission zone. In seedlings, expressed in cotyledons, hypocotyls, and root tip. Accumulates slowly in leaves as they mature, in the mesophyll and the cells that surround the vascular bundles.
messages: Involved in the regulation of sugars and amino acids metabolisms during the night period.
messages: Mitochondrion
messages: When associated with NAD-ME2 disruption, loss of NAD-dependent malic enzyme activity associated with an altered steady-state levels of sugars and amino acids at the end of the light period.

3702:AT3G63520
gene id: 3702:AT3G63520
uniprot id: O65572
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the carotenoid oxygenase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By drought stress.
messages: Cleaves a variety of carotenoids symmetrically at both the 9-10 and 9'-10' double bonds. Active on beta,beta-carotene, lutein, zeaxanthin, all-trans-violaxanthin, 9-cis-violaxanthin and 9'-cis-neoxanthin. With most substrates, the carotenoid is symmetrically cleaved. Probably not involved in abscisic acid biosynthesis.
messages: Cytoplasm
messages: High expression in flowers and siliques. Also detected in stems, leaves and roots.
messages: Homodimer.
messages: Plants do not show any phenotype alteration, but leads to higher seed carotenoid content.

3702:AT1G23090
gene id: 3702:AT1G23090
uniprot id: A0A1P8AM96
uniprot id: A0A5S9VNP4
uniprot id: Q9SXS2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: Expressed only in leaves.
messages: H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
messages: Membrane

3702:AT2G13800
gene id: 3702:AT2G13800
uniprot id: A0A1P8AZF0
uniprot id: Q8LPS5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with TMK4/BARK1 (PubMed:23921992).
messages: Serine/threonine-kinase of unknown function.

3702:AT5G50170
gene id: 3702:AT5G50170
uniprot id: A0A178USC9
uniprot id: Q9FGS8
names: Subcellular Location Annotation
messages: Membrane

3702:ArthCp085
gene id: 3702:ArthCp085
uniprot id: A0A1B1W512
uniprot id: P56791
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT5G46880
gene id: 3702:AT5G46880
uniprot id: Q9FJS2
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Expressed in shoot apical meristem (SAM) with higher levels in L1 cells and the epidermal layer of young leaves. Expressed in the L1 of apical inflorescence meristems, early flower primordia, carpel and stamen filament epidermis, ovule primordia, nucellus and chalaze.
messages: Nucleus
messages: Probable transcription factor (By similarity). Involved, together with PDF2, in the regulation of flower organs development by promoting the expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers (PubMed:23590515).
messages: Sequencing errors.
messages: The double mutant pdf2-1 hdg5-1 exhibits abnormal flowers with sepaloid petals and carpelloid stamens in association with a reduced expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers.

3702:AT4G31780
gene id: 3702:AT4G31780
uniprot id: A0A1P8B6W3
uniprot id: A0A2H1ZEP5
uniprot id: O81770
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by phosphatidate (PA) and phosphatidylglycerol (PG) (PubMed:20023301). Inhibited by galvestine-1 (PubMed:21946275).
messages: Belongs to the glycosyltransferase 28 family.
messages: Expressed in roots, stems, leaves, flowers, siliques and seeds.
messages: Highly expressed throughout whole developmental stages. Transient increase in embryos at the globular stage.
messages: Homodimer.
messages: Induced by illumination and cytokinin treatment in etiolated seedlings. Not induced by phosphate deprivation.
messages: Involved in the synthesis of the major structural component of photosynthetic membranes. Required for proper thylakoid membrane biogenesis. Does not discriminate between prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the prokaryotic one. Is responsible for most galactolipid synthesis in chloroplasts (PubMed:10869420, PubMed:11171188, PubMed:11553816, PubMed:17940034). Required for the formation of thylakoid membranes and functional photosynthetic electron transport during cotyledons greening in young seedlings (PubMed:25253888). May link galactolipid synthesis with the coordinated transcriptional regulation of chloroplasts and other organelles during cotyledon greening (PubMed:25253888).
messages: Membrane
messages: Plants show defects in chloroplast biogenesis and a dwarf and albino phenotype. The amount of monogalactosyldiacylglycerol was reduced by 98% in the mutant leaves, indicating that MGD2 or MGD3 cannot compensate for loss of MGD1 function.
messages: chloroplast inner membrane

3702:AT1G69295
gene id: 3702:AT1G69295
uniprot id: Q93V72
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
messages: Cell membrane
messages: Contains two additional disulfide bonds.
messages: May be due to intron retention.
messages: plasmodesma

3702:AT4G01995
gene id: 3702:AT4G01995
uniprot id: A0A384KFJ6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G32080
gene id: 3702:AT2G32080
uniprot id: A0A178VVW2
uniprot id: A0A178VXA3
uniprot id: Q9SKZ1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PUR DNA-binding protein family.
messages: Homodimer. Interacts with TCP20.
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: Transcription factor that specifically binds the purine-rich double-stranded telomeric repeated sequence 5'-AAACCCTAA-3' found in promoter telo boxes.

3702:AT5G66680
gene id: 3702:AT5G66680
uniprot id: A0A178UHG1
uniprot id: Q944K2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DDOST 48 kDa subunit family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Embryo-lethal.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation (PubMed:15860005). N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity (By similarity).
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER).

3702:AT3G21580
gene id: 3702:AT3G21580
uniprot id: Q944H2
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: Was originally thought to belong to the ABC transporter family (PubMed:18299247). Lacks the conserved ABC domain, which is one of the features of the ABC transporter family.
messages: chloroplast

3702:AT1G72360
gene id: 3702:AT1G72360
uniprot id: A0A178W8F1
uniprot id: B3H5K8
uniprot id: Q8H0T5
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Expressed in roots and at lower levels in shoots.
messages: Highly expressed in roots and leaf trichomes (PubMed:24728113). Expressed in rosette leaves, stems, cauline leaves and flowers (PubMed:24728113).
messages: In presence of oxygen, the N-terminal cysteine residue (Cys-2) of ERF73 can be oxidized by cysteine oxidases, thus preparing the protein for N-end rule pathway-mediated proteasomal degradation (Probable). Under low oxygen levels, Cys oxidation is prevented, ERF73 is stabilized and confers tolerance to hypoxia (Probable).
messages: Induced under hypoxic conditions in roots (PubMed:20113439, PubMed:21615413, PubMed:21398256, PubMed:24395201, PubMed:24728113, PubMed:32977426). Induced during hypoxia under nitrate nutrition (PubMed:30535180). Induced by ethylene (PubMed:21398256, PubMed:28698356). Induced by hydrogen peroxide (PubMed:24395201).
messages: Involved in root development through the regulation of root meristem cell division (PubMed:24728113). Does not act as a transcriptional activator via the cis-acting CRT/DRE element (PubMed:24728113).
messages: Is mostly responsible for transactivation of hypoxia-responsive genes.
messages: Nucleus
messages: Plants overexpressing ERF73 exhibit increase tolerance to submergence.
messages: Seedlings silencing ERF73 exhibit reduced elongation of the primary root (PubMed:21398256). Seedlings overexpressing ERF73 exhibit increased elongation of the primary root (PubMed:32977426). Plants overexpressing ERF73 exhibit increased tolerance to hypoxia treatment (PubMed:32977426).
messages: Transcriptional activator involved in the hypoxic stress response (PubMed:20113439, PubMed:21615413, PubMed:21398256, PubMed:24728113, PubMed:32977426). Acts as a transcriptional activator via the cis-acting element GCC box (PubMed:24728113, PubMed:32977426). Plays a role in low oxygen signaling and contributes to tolerance to anoxia stress by enhancing anaerobic gene expression and ethanolic fermentation (PubMed:20113439, PubMed:21398256). Invovlved in the modulation of ethylene responses under both normoxia and hypoxia (PubMed:21398256).

3702:AT1G51490
gene id: 3702:AT1G51490
uniprot id: A0A2H1ZED6
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT1G10480
gene id: 3702:AT1G10480
uniprot id: A0A178W5E9
uniprot id: Q39264
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By cytokinin and ethylene.
messages: Highly expressed in roots, young leaves, developing stems, branches, inflorescence meristems, floral meristems and siliques. Expressed at low levels in rosette and cauline leaves.
messages: Nucleus
messages: Plants over-expressing ZFP5 show formation of ectopic trichomes on carpels and other inflorescence organs.
messages: Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin (GA). Acts upstream of GIS, GIS2, ZFP8 and the trichome initiation regulators GL1 and GL3 (PubMed:21803862, PubMed:22301962). Binds the promoter region of ZFP8, which may be a direct target of ZPF5 (PubMed:21803862). Is not involved in the regulation of trichome branching (PubMed:22301962). Modulates root hair initiation and elongation in response to cytokinin and ethylene signals by directly promoting expression of the CAPRICE (CPC) gene (PubMed:22762888).
messages: Reduced trichome production on sepals, cauline leaves, paraclades and main inflorescence stems. Reduced number and size of root hairs, due to reduced growth rate.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G13810
gene id: 3702:AT3G13810
uniprot id: Q9LRW7
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.

3702:AT3G18130
gene id: 3702:AT3G18130
uniprot id: Q9LV28
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily.
messages: Homodimer and heterodimer with RACK1A or RACK1B (Probable). Interacts with GB1, MEKK1, MKK4, MKK5, MPK3 and MPK6, but not with GPA1 or MPK4 (PubMed:25731164).
messages: Minor component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes (PubMed:18947417). MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway (PubMed:25731164).
messages: No visible phenotype under normal growth condition.
messages: Widely expressed.

3702:AT1G64930
gene id: 3702:AT1G64930
uniprot id: A0A178VZZ4
uniprot id: Q9XIQ3
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT1G53080
gene id: 3702:AT1G53080
uniprot id: A0A178W3S1
uniprot id: Q9LNN3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the leguminous lectin family.
messages: apoplast

3702:AT1G07130
gene id: 3702:AT1G07130
uniprot id: Q9LMK5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the STN1 family.
messages: Component of the CST complex, a complex that binds to single-stranded DNA and is required to protect telomeres from DNA degradation. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves (PubMed:19064932). Associates with enzymatically active telomerase (PubMed:25329641). Plays a genomewide role in DNA replication and facilitates re-replication at non-telomeric loci (PubMed:25299252).
messages: Component of the CST complex, composed of CTC1, TEN1 and STN1. Interacts with CTC1 (PubMed:19854131). Interacts with TEN1 (PubMed:23572541, PubMed:25329641). Interacts with POT1A (PubMed:25329641). In vitro interaction with TEN1 and POT1A is mutually exclusive, indicating that POT1A and TEN1 may compete for the same binding site (PubMed:25329641).
messages: Nucleus
messages: Plants display an immediate onset of growth and developmental defects and reduced fertility, probably due to impaired telomeres (PubMed:19064932). In nearly all mutants, apical dominance is completely abolished, leading to multiple inflorescence bolts that are often fused (PubMed:19064932). In addition, floral phyllotaxy is perturbed and siliques develop at irregular positions on the inflorescence bolt (PubMed:19064932). Moreover, leaf size is substantially reduced, likely reflecting defects in cell proliferation (PubMed:19064932). These effects are accompanied by catastrophic loss of telomeric and subtelomeric DNA, high levels of end-to-end chromosome fusions, increased G-overhang signals, and elevated telomere recombination (PubMed:19064932). Progressive loss of telomeric DNA and gradual onset of telomere dysfunction (PubMed:25299252). Hindered re-replication of heterochromatic regions (PubMed:25299252).
messages: Widely expressed.
messages: telomere

3702:AT2G14720
gene id: 3702:AT2G14720
uniprot id: A0A178VV05
uniprot id: Q56ZQ3
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the VSR (BP-80) family.
messages: Expressed at low levels in seeds, seedlings, roots, stems, leaves, flowers and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Prevacuolar compartment membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: The tyrosine-based internalization signal may be involved in trafficking at the TGN.
messages: Vacuolar-sorting receptor (VSR) involved in clathrin-coated vesicles sorting from Golgi apparatus to vacuoles.
messages: clathrin-coated vesicle membrane

3702:AT4G09960
gene id: 3702:AT4G09960
uniprot id: A0A178UX25
uniprot id: A0A1P8B889
uniprot id: A0A1P8B895
uniprot id: A8MQL9
uniprot id: F4JKV2
uniprot id: Q38836
names: Caution
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with AGL15 and AGL16.
messages: May be due to exon skipping.
messages: Nucleus
messages: Probable transcription factor (Probable). Is required, together with TT16/AGL32 for the maternal control of endothelium formation, which is essential for female gametophyte development and fertilization, and seed formation (PubMed:22176531).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G27135
gene id: 3702:AT1G27135
uniprot id: A0A654EID4
uniprot id: A8MRI0
names: Similarity
names: Tissue Specificity
messages: Belongs to the MEG family.
messages: Expressed in stems, leaves and flowers.

3702:AT3G10510
gene id: 3702:AT3G10510
uniprot id: A0A178V9G7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G60130
gene id: 3702:AT3G60130
uniprot id: A0A654FJD9
uniprot id: A8MSC6
uniprot id: F4JAM3
uniprot id: Q9M1D0
names: Developmental Stage
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 1 family.
messages: By abscisic acid (ABA) and dark.
messages: Expressed at low levels in cauline leaves and flowers.
messages: Up-regulated in leaves during natural senescence.

3702:AT3G48310
gene id: 3702:AT3G48310
uniprot id: Q9STL1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G13740
gene id: 3702:AT1G13740
uniprot id: A0A178WBB1
uniprot id: Q9LMX5
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a negative regulator of abscisic acid (ABA) response during germination through the ubiquitin-mediated proteolysis of ABI5/DPBF1.
messages: Acts as a negative regulator of abscisic acid (ABA) response.
messages: Belongs to the Ninja family.
messages: Exhibits hypersensitivity to salt, glucose and osmotic stress and slight hypersensitivity to abscisic acid (ABA).
messages: Forms a homodimer and heterodimer with AFP1 and AFP3. Interacts with ABI5/DPBF1, DPBF2, AREB3/DPBF3, EEL/DPBF4, ABF1, ABF3/DPBF5 and ABF4/AREB2.
messages: Nucleus
messages: Up-regulated by abscisic acid (ABA), glucose and salt.

3702:AT3G49990
gene id: 3702:AT3G49990
uniprot id: Q9SN19
names: Similarity
messages: Belongs to the LTV1 family.

3702:AT5G09490
gene id: 3702:AT5G09490
uniprot id: A0A384L6V7
uniprot id: Q1PDY1
uniprot id: Q9FY66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Cytoplasm

3702:AT3G60740
gene id: 3702:AT3G60740
uniprot id: Q8L5R3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the PILZ group of genes that disrupt, when mutated, the microtubule cytoskeleton and produce mushroom-shaped ('pilz' in German) embryos.
messages: Belongs to the TBCD family.
messages: Embryo lethality. Embryo development limited to the formation of a few giant cells lacking microtubules but not actin filaments, each with one to several nuclei. Failure to localize KNOLLE in mitotic cells. Presence of abnormal endosperm with giant polyploid nuclei.
messages: Regulates microtubule function in seed development. Required for development of both embryo and endosperm tissue. Not essential for cell viability. Probably involved in the binding of beta-tubulin in the multimeric supercomplex.
messages: Supercomplex made of cofactors A to E. Cofactors A and D function by capturing and stabilizing tubulin in a quasi-native conformation. Cofactor E binds to the cofactor D-tubulin complex; interaction with cofactor C then causes the release of tubulin polypeptides that are committed to the native state (By similarity).

3702:AT5G05400
gene id: 3702:AT5G05400
uniprot id: Q9FLB4
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Potential disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT3G24120
gene id: 3702:AT3G24120
uniprot id: A0A178VFD1
uniprot id: A0A7G2EN23
uniprot id: Q94A57
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MYB-CC family.
messages: Homo- and heterodimers (PubMed:26586833). Interacts with PHL3, but not with PHR1 (PubMed:26586833).
messages: Nucleus
messages: Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833).
messages: Up-regulated in roots by low Pi.

3702:AT1G43620
gene id: 3702:AT1G43620
uniprot id: Q9XIG1
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 28 family.
messages: Expressed in developing seeds, seedlings, leaves and around the apical tip of cotyledons. In embryo, expressed in the seed coat and cotyledons.
messages: Involved in the biosynthesis of sterol glucosides. Catalyzes the synthesis of steryl glycosides (SGs) and acyl steryl glycosides (ASGs) which are the most abundant sterol derivatives in higher plants. Can act on several sterols like sitosterol, campesterol and stigmasterol. Is required for embryonic development, seed suberin accumulation, cutin formation and flavanoid accumulation in the seed coat. Both UGT80A2 and UGT80B1 are required for the normal production of SGs and ASGs in seeds.
messages: Reduced growth rates. Altered embryonic development, seed suberin accumulation, cutin formation in the seed coat and reduced seed size. Lack of flavanoid accumulation in the seed coat (transparent testa phenotype).

3702:AT1G33540
gene id: 3702:AT1G33540
uniprot id: A0A1P8ASK8
uniprot id: Q9C7Z9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in roots.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT2G21380
gene id: 3702:AT2G21380
uniprot id: Q9SJU0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
messages: chloroplast

3702:AT5G43401
gene id: 3702:AT5G43401
uniprot id: Q2V318
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Could be the product of a pseudogene. Lacks 2 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT3G24520
gene id: 3702:AT3G24520
uniprot id: A0A654FC90
uniprot id: Q9LV52
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class C subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT2G27110
gene id: 3702:AT2G27110
uniprot id: A0A654EY46
uniprot id: B9DH05
uniprot id: Q9ZVC9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT5G05010
gene id: 3702:AT5G05010
uniprot id: A0A654FYU7
uniprot id: B9DGK9
uniprot id: Q93Y22
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes medium subunit family. Delta-COP subfamily.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3702:AT3G18090
gene id: 3702:AT3G18090
uniprot id: A0A1I9LNQ8
uniprot id: A0A1I9LNQ9
uniprot id: Q9LV32
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: Component of the RNA polymerase IVa and IVb (Pol IV) complexes.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase IVa and IVb which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) silencing of endogenous repeated sequences, including transposable largest subunit. Also required for full erasure of methylation elements. Required for intercellular RNA interference (RNAi) leading to systemic post-transcriptional gene silencing (Probable).
messages: Nucleus

3702:AT1G79690
gene id: 3702:AT1G79690
uniprot id: Q8L831
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, stems and, at lower level, leaves.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.

3702:AT4G02820
gene id: 3702:AT4G02820
uniprot id: Q9SY07
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G55610
gene id: 3702:AT3G55610
uniprot id: A0A178VF78
uniprot id: B3H5E3
uniprot id: P54888
names: Function
names: Similarity
messages: In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
messages: In the N-terminal section; belongs to the glutamate 5-kinase family.
messages: P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants.

3702:AT5G06680
gene id: 3702:AT5G06680
uniprot id: A0A5S9Y1Z7
uniprot id: Q9FG37
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TUBGCP family.
messages: Cytoplasm
messages: Gamma-tubulin complex is essential for the control of microtubular network remodeling in the course of initiation and development of giant-feeding cells, and for the successful reproduction of nematodes (e.g. Meloidogyne spp.) in their plant hosts.
messages: Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.
messages: Gamma-tubulin complex is necessary for microtubule nucleation at the microtubule organizing centers (MTOCs). Required for the positioning of the gamma-tubulin-containing complex on pre-existing microtubules and for the proper organization of cortical arrays.
messages: Nucleus envelope
messages: Part of the gamma-tubulin complex. Gamma-tubulin complex is composed of gamma-tubulin and GCP proteins. Interacts directly with GCP2, GIP1 and GIP2.
messages: Up-regulated in galls upon nematode infection.
messages: cell cortex
messages: microtubule organizing center
messages: spindle

3702:AT5G19450
gene id: 3702:AT5G19450
uniprot id: Q42438
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Cell membrane
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (321-351) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT3G42170
gene id: 3702:AT3G42170
uniprot id: A0A178VJS5
uniprot id: A0A1I9LLZ3
uniprot id: Q9M2N5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus
messages: Transposase-like protein that is essential for plant growth and development. Binds the promoter region of the DNA helicase KU70 and genes involved in chromatin remodeling. May regulate global gene expression by recruiting other cellular factors.
messages: Very slow growth and absence of expansion of cotyledons or development of normal leaves or floral organs. Short root with an excess of abnormal root hairs. Extremely rare production of some photosynthetic tissue.

3702:AT4G29010
gene id: 3702:AT4G29010
uniprot id: A0A178UXN1
uniprot id: Q9ZPI6
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
messages: In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
messages: Involved in peroxisomal fatty acid beta-oxidation. Required for wound-induced jasmonate biosynthesis. Possesses enoyl-CoA hydratase activity against short chain substrates (C4-C6) and 3-hydroxyacyl-CoA dehydrogenase activity against chains of variable sizes (C6-C16) (PubMed:10521521, PubMed:17544464, PubMed:20463021). Possesses cinnamoyl-CoA hydratase activity and is involved in the peroxisomal beta-oxidation pathway for the biosynthesis of benzoic acid (BA). Required for the accumulation in seeds of benzoylated glucosinolates (BGs) and substituted hydroxybenzoylated choline esters, which are BA-containing secondary metabolites. Required for salicylic acid (SA) in seeds (PubMed:24254312).
messages: Peroxisome
messages: Reduced rosette size, twisted leaves, and abnormal and sterile flowers.
messages: The epimerase and isomerase activities are contained in the N-terminal region while the dehydrogenase activity is in the C-terminal region.
messages: Widely expressed.

3702:AT3G55520
gene id: 3702:AT3G55520
uniprot id: Q9M2S7
names: Function
names: Similarity
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).

3702:AT3G24110
gene id: 3702:AT3G24110
uniprot id: Q9LRN6
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.3, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT1G74650
gene id: 3702:AT1G74650
uniprot id: A0A384KT80
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G75900
gene id: 3702:AT1G75900
uniprot id: A0A178W159
uniprot id: Q94CH6
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Flower buds.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G39620
gene id: 3702:AT4G39620
uniprot id: Q9SV96
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Embryonic lethality due to embryo development arrest at early globular stage.
messages: Essential for embryo development.
messages: chloroplast

3702:AT4G11890
gene id: 3702:AT4G11890
uniprot id: F4JPT7
uniprot id: Q8GY82
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated and phosphorylated by CRK36.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: By ozone. Down-regulated by light stress (PubMed:20500828). Induced by infection with Hyaloperonospora arabidopsidis (PubMed:21711359). Induced by salt stress, drought stress and abscisic acid (ABA) (PubMed:22225700). Induced by salicylic acid (SA) and infection with the bacterial pathogen P.syringae and the necrotrophic fungal pathogen B.cinerea (PubMed:24215930).
messages: Forms a complex with CRK36 that may negatively control abscisic acid (ABA) and osmotic stress signal transduction (PubMed:22225700). Involved in plant response to ABA during seed germination, early seedling growth and responses to abiotic stresses by inducing the expression of ABA-responsive genes and stress-inducible genes (PubMed:23583936). Acts as positive regulator in disease resistance, downstream of NPR1 and WRKY70 (PubMed:24215930).
messages: Interacts with CRK36.
messages: May be due to a competing acceptor splice site.
messages: No visible phenotype under normal growth conditions, but mutant seedlings show increased sensitivity to abscisic acid (ABA) and salt stress during post-germinative growth (PubMed:22225700). Increased susceptibility to P.syringae infection. Weak expression of pathogenesis-related (PR) genes after infection with P.syringae or salicylic acid (SA) treatment (PubMed:24215930).
messages: cytosol

3702:AT4G16210
gene id: 3702:AT4G16210
uniprot id: Q6NL24
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Peroxisome
messages: Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

3702:AT3G57020
gene id: 3702:AT3G57020
uniprot id: A0A178V5B5
uniprot id: Q9M1J6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the strictosidine synthase family.
messages: Vacuole

3702:AT3G27460
gene id: 3702:AT3G27460
uniprot id: A0A1I9LNK9
uniprot id: A0A1I9LNL0
uniprot id: A0A1I9LNL1
uniprot id: A0A654FGL3
uniprot id: F4IWI8
uniprot id: Q8RXY6
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SGF29 family.
messages: Chromatin reader component of the transcription regulatory histone acetylation (HAT) complex SAGA (By similarity). Involved in salt stress tolerance. Enhances the effect of ADA2B in the positive regulation of salt-induced gene expression (PubMed:21193996).
messages: Delayed flowering. Increased tolerance to salt stress.
messages: Expressed in roots, rosette leaves, cauline leaves, stems and flowers.
messages: Nucleus
messages: The SGF29 tudor-like domain mediates binding to methylated 'Lys-4' of histone H3 (H3K4me).

3702:AT5G53210
gene id: 3702:AT5G53210
uniprot id: A0A178UF96
uniprot id: A0A1P8BE01
uniprot id: Q700C7
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in developing leaf epidermis (PubMed:17183265). Reduced accumulation in the stomatal lineage ground cells (SLGCs) where BASL is polarized in the cell cortex (PubMed:27746029). Observed in small cells of non-protruding hypocotyl cell files and of developing cotyledon epidermis (PubMed:22466366). Restricted to meristemoids (stomatal precursor cell) in leaves epidermis, mostly in dividing cells of non-protruding cell files (PubMed:25680231, PubMed:18641265, PubMed:19008449).
messages: First observed in a subset of undifferentiated epidermal cells, often by pair of neighboring cells. Later confined to small epidermal cells, including cells that have recently divided next to stomatal lineage cells. Also expressed in stomatal lineage cells, fading out progressively during meristemoid determination.
messages: Homodimer (Probable). Forms dimers with SCRM and SCRM2 (PubMed:18641265, PubMed:28507175). May interact with CDKA-1 (PubMed:25680231).
messages: Negatively regulated through phosphorylation by the MAPK module (PubMed:19008449). Activity is constrained by polarized BASL in stomatal lineage ground cells (SLGCs) undergoing ACD (PubMed:27746029).
messages: Nucleus
messages: Phosphorylated by ASK7/BIN2 and ASK3/SK12; this post-translational modification inhibits activity and limit epidermal cell proliferation (PubMed:30429609, PubMed:22466366). Phosphorylation by MPK3 and MPK6 leads to the inhibition of stomatal fate and to degradation (PubMed:25843888, PubMed:19008449). Stabilized by CDKA-1-mediated phosphorylation at Ser-186 which promotes stomatal development (PubMed:25680231).
messages: Repressed by brassinazole (BRZ), thus leading to a reduced number of stomata in hypocotyls (PubMed:25680231). Inhibited by low relative humidity (LRH) via epigenetic CG methylation, thus leading to a reduced stomatal index (PubMed:22442411). Repressed by YDA (at protein level) (PubMed:19008449). Post-transcriptional decrease of protein level in response to osmotic stress (e.g. mannitol), through the action of a mitogen-activated protein kinase (MAPK) cascade; this repression is reversed by the MAPK kinase inhibitor PD98059 (PubMed:25381317).
messages: Stomatal defects in cotyledons and hypocotyls.
messages: Transcription factor acting as an integration node for stomata and brassinosteroid (BR) signaling pathways to control stomatal initiation and development (PubMed:22466366, PubMed:28507175). Activates transcription when in the presence of SCRM/ICE1 (PubMed:28507175). Functions as a dimer with SCRM or SCRM2 during stomatal initiation (PubMed:18641265). Required for the initiation, the spacing and the formation of stomata, by promoting the first asymmetric cell divisions (PubMed:25843888, PubMed:25680231, PubMed:19008449). Together with FMA and MUTE, modulates the stomata formation. Involved in the regulation of growth reduction under osmotic stress (e.g. mannitol), associated with a quick decrease of meristemoid mother cells (MMCs) number lower stomatal index and density (PubMed:25381317).

3702:AT1G29630
gene id: 3702:AT1G29630
uniprot id: B3H7B3
uniprot id: Q8L6Z7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 5'->3' double-stranded DNA exonuclease which may also possess a cryptic 3'->5' double-stranded DNA exonuclease activity. Functions in DNA mismatch repair.
messages: Belongs to the XPG/RAD2 endonuclease family. EXO1 subfamily.
messages: Binds 2 magnesium ions per subunit. They probably participate in the reaction catalyzed by the enzyme. May bind an additional third magnesium ion after substrate binding.
messages: Nucleus
messages: Putative 5'->3' double-stranded DNA exonuclease which may also contain a cryptic 3'->5' double-stranded DNA exonuclease activity. May be involved in DNA mismatch repair (MMR) (By similarity).

3702:AT2G36026
gene id: 3702:AT2G36026
uniprot id: A0A654F9W7
uniprot id: B3H6R4
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT3G62960
gene id: 3702:AT3G62960
uniprot id: A0A178VEU0
uniprot id: Q9LYC5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).

3702:AT2G47700
gene id: 3702:AT2G47700
uniprot id: O82239
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Levels are following a circadian rhythm oscillated under day/night cycles with higher levels during the night.
messages: Mediates phytochrome (phyA and phyB)-controlled seedling deetiolation responses such as hypocotyl elongation in response to red and far-red light (PubMed:16709197, PubMed:16384903). Required for light-induced expression of LHCB3 and CHALCONE SYNTHASE (CHS) (PubMed:16384903). Regulates negatively CONSTANS (CO) and FLOWERING LOCUS T (FT) expression and photoperiodic flowering (PubMed:16709197).
messages: Nucleus
messages: Photomorphogenic mutant insensitive to red and far-red light leading to long hypocotyls. Flowers early particularly under long days (PubMed:16709197, PubMed:16384903). Also impaired in phytochrome-mediated end-of-day far-red light response, cotyledon expansion, far-red light block of greening, and light-induced expression of LHCB3 and CHALCONE SYNTHASE (CHS) (PubMed:16384903). Enhanced expression of CONSTANS (CO) and FLOWERING LOCUS T (FT) under long days and short days (PubMed:16709197).

3702:AT5G39300
gene id: 3702:AT5G39300
uniprot id: A0A178UJY9
uniprot id: Q9FL77
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Membrane
messages: Sequencing errors.
messages: cell wall

3702:AT2G21170
gene id: 3702:AT2G21170
uniprot id: A0A178VN28
uniprot id: A8MRE8
uniprot id: Q9SKP6
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the triosephosphate isomerase family.
messages: Homodimer.
messages: In plants, there are two types of TPIS, cytosolic and plastid.
messages: chloroplast

3702:AT2G04034
gene id: 3702:AT2G04034
uniprot id: A0A178VVR5
uniprot id: Q2V4A4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G21920
gene id: 3702:AT3G21920
uniprot id: Q9LRM1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT2G37580
gene id: 3702:AT2G37580
uniprot id: A0A178VZP4
uniprot id: O80927
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G02580
gene id: 3702:AT4G02580
uniprot id: O22769
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 24 kDa subunit family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Complex I is composed of at least 49 different subunits. This is a component of the flavoprotein-sulfur (FP) fragment of the enzyme.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Mitochondrion inner membrane

3702:AT3G04850
gene id: 3702:AT3G04850
uniprot id: A0A178VLW7
uniprot id: Q84JZ8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the lin-54 family.
messages: Nucleus
messages: Plays a role in development of both male and female reproductive tissues.
messages: The cysteine-rich domain CRC binds zinc in vitro.

3702:AT1G25530
gene id: 3702:AT1G25530
uniprot id: Q9C6M2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Amino acid transporter.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane

3702:AT1G06645
gene id: 3702:AT1G06645
uniprot id: F4IDQ2
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT5G42520
gene id: 3702:AT5G42520
uniprot id: A0A178UIB6
uniprot id: A8MQG2
uniprot id: Q8L999
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Alanine-zipper domain is involved in homo- or hetero-dimerization via electrostatic interaction.
messages: Belongs to the BBR/BPC family.
messages: Expressed in seedlings, leaves and pistils. Detected in the base of flowers and tips of carpels, in sepal vasculature, in young rosette, in the lateral and tip of primary roots, and in ovule at the exception of the outer integument.
messages: Homodimer. Heterodimer with BPC4.
messages: Nucleus
messages: Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.
messages: nucleolus

3702:AT4G26100
gene id: 3702:AT4G26100
uniprot id: A0A178UYM7
uniprot id: P42158
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CK1 Ser/Thr protein kinase family. Casein kinase I subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins.
messages: Cytoplasm
messages: Expressed in flowers.
messages: Monomer.
messages: plasmodesma

3702:AT5G61700
gene id: 3702:AT5G61700
uniprot id: A0A1P8BGL2
uniprot id: A0A1P8BGL8
uniprot id: Q9FLT8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Membrane

3702:AT1G25240
gene id: 3702:AT1G25240
uniprot id: A0A178W675
uniprot id: A0A384LAR0
uniprot id: Q9FRH3
names: Caution
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vesicle
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT1G11545
gene id: 3702:AT1G11545
uniprot id: A0A178W0W2
uniprot id: Q8L9A9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT5G22390
gene id: 3702:AT5G22390
uniprot id: A0A178UH66
uniprot id: Q9FMR2
names: Similarity
messages: Belongs to the fantastic four family.

3702:AT2G02820
gene id: 3702:AT2G02820
uniprot id: F4IRB4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates during ovule development. Detected at low levels in ovules and in the embryo sac of stage 13 flowers (PubMed:22915737). Not detected during embryo development. In seedlings and young plants, present in some spots (presumably stomata) in cotyledons and later in veins of hypocotyls as well as of petioles, hydathodes, stipules, in roots and lateral root primordia, and in the lower halves of first leaves. Detected in the phloem, as well as in the cortex of inflorescence stems. In roots, confined in developing xylem cells in the part of the differentiation zone with well-developed root hairs (PubMed:26391711). Present in lateral root tips and subsequently in a larger area. Accumulates in columella cells of lateral roots (PubMed:26578169). Expressed at the base of developing flowers, including ovaries. In flowers, detected in parts of the major stem axis, and in the anther at some stages of development, present in veins of sepals and accumulates progressively in ovaries, filaments, receptacles, and ovules. Also detected in the valve margins and receptacles of siliques and at the joint between the stigma and the style, as well as in the tapetum around pollen grains in maturing anthers (PubMed:26391711).
messages: Double mutants flp-7 myb88 and flp-1 myb88 have strong defects in stomata repartition with large stomatal clusters formation (PubMed:16155180). Increased accumulation of CDKB1-1 in the double mutant flp-1 myb88 (PubMed:20675570). Double mutants flp-1 myb88 have increased susceptibility to drought and high salt (NaCl), as well as increased rates of water loss; these phenotypes are associated with reduced accumulation of many typical abiotic stress gene transcripts. Lower stomatal closure in response to abscisic acid (ABA) treatment (PubMed:21105921). Accumulation of CYCA2-3 in newly formed guard cells in flp-1 myb88 double mutant (PubMed:21772250). The double mutants flp-1 myb88 and flp-7 myb88 treated with oryzalin, a microtubule depolymerizing drug, exhibit round-to-oval-shaped single guard cells (sGCs) associated with increased DNA content due to endoreplication leading to 10C DNA levels. The quadruple mutant flp-1 myb88 cdkb1;1 cdkb1;2 has a reduced number of large single guard cells blocked at mitosis, with strongly altered shape and size and characterized by enlarged nucleus due to endomitosis and endocycling, as well as extensive chloroplast replication (PubMed:24123248). Triple mutants cdka;1 flp-1 myb88 don't have guard cells stacks but accumulates sGCs. Accumulation of CDKA-1 in the double mutant flp-1 myb88 (PubMed:24687979). Increased number of ovules produced by the placenta but reduced female fertility due to defective meiotic entry and progression, and subsequent altered embryo sac development, thus leading to reduced seed set (PubMed:22915737). The double mutants flp-1 myb88 and flp-7 myb88 lack lateral roots with reduced PIN3 levels (PubMed:26578065). Abnormal gravitropic set-point angles (lower than 30 degree) of lateral roots (PubMed:26578169).
messages: Expressed at low levels in all organs including roots, leaves, hypocotyls stems, flowers, siliques and buds.
messages: Interacts with RBR1.
messages: Nucleus
messages: Transcription factor that binds to DNA in promoters cis-regulatory element 5'-GGCGCGC-3' of cell cycle genes, including cyclins, cyclin-dependent kinases (CDKs), and components of the pre-replication complex (PubMed:20675570, PubMed:24687979). Binds to DNA in promoters cis-regulatory element 5'-AGCCG-3' of auxin regulated genes (e.g. PIN3 and PIN7) (PubMed:26578169). Together with FAMA and MYB124, ensures that stomata contain just two guard cells (GCs) by enforcing a single symmetric precursor cell division before stomatal maturity (PubMed:24571519). Represses the expression of the mitosis-inducing factors CDKB1-1 and CDKA-1, specifically required for the last guard mother cells (GMC) symmetric divisions in the stomatal pathway (PubMed:20675570, PubMed:24687979). Represses CYCA2-3 in newly formed guard cells (PubMed:21772250). Together with MYB88, regulates stomata spacing by restricting divisions late in the stomatal cell lineage thus limiting the number of GMC divisions (PubMed:16155180). In collaboration with CDKB1-1 and CDKB1-2, restrict the G1/S transition and chloroplast and nuclear number during stomatal formation, and normally maintain fate and developmental progression throughout the stomatal cell lineage (PubMed:24123248). Involved in sensing and/or transducing abiotic stress (e.g. drought and salt), probably via the positive regulation of NAC019 (PubMed:21105921). Regulates female reproduction being required for entry into megasporogenesis, probably via the regulation of cell cycle genes (PubMed:22915737). Plays a minor role in lateral roots (LRs) initiation (PubMed:26578065). Involved complementarily in establishing the gravitropic set-point angles of lateral roots by regulating the transcription of PIN3 and PIN7 in gravity-sensing cells of primary and lateral roots (PubMed:26578169).

3702:AT1G76405
gene id: 3702:AT1G76405
uniprot id: A0A178W9W0
uniprot id: Q9FPG2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plastid outer envelope porin OEP21 (TC 1.B.29) family.
messages: Membrane
messages: Voltage-dependent rectifying anion channel that facilitates the translocation between chloroplast and cytoplasm of phosphorylated carbohydrates such as triosephosphate, 3-phosphoglycerate and inorganic phosphate (Pi) depending of ATP to triosephosphate ratio in the plastidial intermembrane space; in high triosephosphate/ATP conditions (e.g. photosynthesis), export of triosphosphate from chloroplast (outward rectifying channels), but in high ATP/triosephosphate conditions (e.g. dark phase), import of phosphosolutes (inward rectifying channels) (By similarity).
messages: Voltage-dependent rectifying anion channel that facilitates the translocation between chloroplast and cytoplasm of phosphorylated carbohydrates such as triosephosphate, 3-phosphoglycerate and inorganic phosphate (Pi) depending of ATP to triosephosphate ratio in the plastidial intermembrane space; in high triosephosphate/ATP conditions (e.g. photosynthesis), export of triosphosphate from chloroplast (outward rectifying channels), but in high ATP/triosephosphate conditions (e.g. dark phase), import of phosphosolutes (inward rectifying channels).
messages: chloroplast outer membrane
messages: etioplast membrane

3702:AT1G28960
gene id: 3702:AT1G28960
uniprot id: A0A178WAX9
uniprot id: Q8GYB1
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Coenzyme A diphosphatase which mediates the cleavage of oxidized CoA. Can use malonyl-CoA, hexanoyl-CoA, lauroyl-CoA, myristoyl-CoA and palmitoyl-CoA as substrates, but not isobutyryl-CoA or propionyl-CoA.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: May be due to an intron retention.
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G05420
gene id: 3702:AT1G05420
uniprot id: A0A178WNG4
uniprot id: A0A1P8AWY8
uniprot id: F4I8R6
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, shoots, stems, flower buds and siliques.
messages: Interacts with KNAT1, KNAT2, KNAT3 and KNAT4.
messages: Nucleus
messages: Plants over-expressing OFP12 have no visible phenotype.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT2G43690
gene id: 3702:AT2G43690
uniprot id: A0A178VVP0
uniprot id: A0A178VXC0
uniprot id: A0A384KNZ8
uniprot id: O22834
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G01560
gene id: 3702:AT5G01560
uniprot id: A0A178UCP1
uniprot id: Q66GN2
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Involved in negative regulation of abscisic acid response in seed germination.
messages: Slight enhancement in abscisic acid-inhibited germination. Redundant with LECRKA4.1 and LECRKA4.2.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G25390
gene id: 3702:AT4G25390
uniprot id: Q9STJ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G16640
gene id: 3702:AT1G16640
uniprot id: Q9FX77
names: Miscellaneous
names: Subcellular Location Annotation
messages: Nucleus
messages: Putative DNA-binding elements conserved in B3 domains from the RAV, ARF and ABI3/VP1 subfamilies are largely absent in At1g16640, suggesting that B3 domains could function in contexts other than transcriptional regulation.

3702:AT1G50280
gene id: 3702:AT1G50280
uniprot id: A0A1P8AQY8
uniprot id: Q8RXR6
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT5G55840
gene id: 3702:AT5G55840
uniprot id: A0A1P8BDC0
uniprot id: Q9LVQ5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G58460
gene id: 3702:AT5G58460
uniprot id: Q9FGH6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane
messages: Specifically expressed in pollen.

3702:AT5G19300
gene id: 3702:AT5G19300
uniprot id: Q6NLH7
names: Similarity
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily.

3702:AT3G27690
gene id: 3702:AT3G27690
uniprot id: A0A178VHN7
uniprot id: A0A1I9LMB4
uniprot id: Q9XF87
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates at stronger levels in low light than in normal or high light; more expressed in growth chamber conditions than when grown in the field (PubMed:22236032). Repressed in leaves exposed to desiccation, cold and high irradiance via a metalloprotease-dependent proteolytic process (at protein level) (PubMed:23598180). Activated by BZIP68 and GBF1 but repressed by BZIP16 (PubMed:22718771).
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: In plants silenced with microRNAs, functional LHCII thylakoid protein complexes where LHCB2 is replaced by LHCB1. However these LHCII complexes are impaired in light state transitions, leading to stunted growth in high light.
messages: Photoregulated by reversible but rapid phosphorylation by STN7 of its threonine residues under state 2 (red) light conditions (PubMed:23995216, PubMed:23888908, PubMed:26392145). Dephosphorylated by PPH1 in state 1 (far red) light conditions (PubMed:20176943, PubMed:23995216, PubMed:23888908, PubMed:26392145). Phosphorylation triggers the formation of the PSI-LHCII supercomplex (PubMed:26392145).
messages: The LHC complex consists of chlorophyll a-b binding proteins (By similarity). Component of LHCII trimers made of LHCB1, LHCB2 and LHCB3 subunits (PubMed:23888908, PubMed:23995216, PubMed:25194026). Associated with super- (PSI-LHCII and PSII-LHCII) and mega-complexes (PSI-PSII-LHCII) containing LHCII and both photosystem (PS)I and PSII, in state 2 (red) light conditions (PubMed:23995216, PubMed:23888908, PubMed:25194026, PubMed:26392145).
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (By similarity). Mediates rapid phosphorylation and migration of LHCII-PSII to photosystem I (PSI) after transition to state 2 (red) light conditions, thus leading to the formation of PSI-PSII-LHCII and PSI-LHCII supercomplex to balance the relative excitation of PSI and PSII (PubMed:23995216, PubMed:23888908, PubMed:25194026, PubMed:26392145). Involved in the production of reactive oxygen species (ROS) and stomatal closure upon abscisic acid (ABA) treatment. Required to prevent water loss (By similarity).
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT5G64490
gene id: 3702:AT5G64490
uniprot id: Q9FGE7
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT5G58784
gene id: 3702:AT5G58784
uniprot id: A0A5S9YF88
uniprot id: Q570Q8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.
messages: Endoplasmic reticulum membrane

3702:AT5G03960
gene id: 3702:AT5G03960
uniprot id: A0A1P8BH03
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus

3702:AT5G04560
gene id: 3702:AT5G04560
uniprot id: Q8LK56
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although strongly related to DNA glycosylase proteins, it differs from these proteins because of its large size and its unique N-terminal basic domain. The DNA repair function has not been proved and may not exist.
messages: Belongs to the DNA glycosylase family. DEMETER subfamily.
messages: Binds 1 [4Fe-4S] cluster. The cluster does not appear to play a role in catalysis, but is probably involved in the proper positioning of the enzyme along the DNA strand.
messages: Mainly expressed in immature flower buds, then decreases as the flower matures. Expressed in the ovule carpels, but not expressed in pollen stamens. Expressed in developing and mature ovules (stages 12-14), then strongly decreases after fertilization.
messages: Maternally expressed. Expressed primarily in the central cell of gametophyte before fertilization. Not expressed in endosperm and embryo after fertilization.
messages: Nucleus
messages: The DEMETER domain, which is present in proteins of the subfamily, is related to the J-domain, but lacks some important conserved residues.
messages: Transcriptional activator involved in gene imprinting. Catalyzes the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism. Allows the expression of the maternal copy of the imprinted MEA gene before fertilization, possibly by antagonizing or suppressing DNA methylation on target promoter. Probably acts by nicking the MEA promoter. Required for stable reproducible patterns of floral and vegetative development.

3702:AT5G53480
gene id: 3702:AT5G53480
uniprot id: A0A178UKY5
uniprot id: Q9FJD4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as negative effector of drought tolerance. Involved in the regulation of stomatal closure and in the abscisic acid (ABA)-mediated pathway that lead to drought tolerance. Does not directly mediate nuclear import of ABI1 and ABI2 which are key regulators of the ABA signaling pathway. May be involved in nuclear translocation of other type 2C protein phosphatases that mediate ABA signaling.
messages: Belongs to the importin beta family. Importin beta-1 subfamily.
messages: Cytoplasm
messages: Delayed development and flowering, reduced length of leaves, stems and siliques, increased sensitivity to abscisic acid (ABA) and increased drought tolerance.
messages: Expressed in roots, cotyledons, leaves, stems, petals, stamen, stigma, siliques, embryos and guard cells.
messages: Forms a complex with the importin subunits alpha IMPA1 or IMPA2, the nucleoporin NUP62 and the Ran-GTP-binding proteins RAN1, RAN2 or RAN3.
messages: Nucleus

3702:AT3G50820
gene id: 3702:AT3G50820
uniprot id: Q9S841
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbO family.
messages: Stabilizes the manganese cluster which is the primary site of water splitting. Regulates dephosphorylation and turnover of the PSII reaction center D1 protein.
messages: chloroplast thylakoid membrane

3702:AT3G01160
gene id: 3702:AT3G01160
uniprot id: Q9MAC6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ESF1 family.
messages: nucleolus

3702:AT4G34330
gene id: 3702:AT4G34330
uniprot id: Q9SYZ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0496 family.
messages: Membrane

3702:AT1G27310
gene id: 3702:AT1G27310
uniprot id: A0A178WBG2
uniprot id: Q9FZK4
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Expressed in roots, stems, leaves and flowers, and, at low levels, in siliques.
messages: Facilitates protein transport into the nucleus. Interacts with various nucleoporins and with Ran-GDP. Could be part of a multicomponent system of cytosolic factors that assemble at the pore complex during nuclear import.
messages: Has a role in nuclear-cytoplasmic transport of proteins and mRNAs.
messages: Interacts with RAN1.
messages: Nucleus
messages: Nucleus envelope

3702:AT3G25290
gene id: 3702:AT3G25290
uniprot id: Q9LSE7
names: Cofactor
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: DOMON domain could bind catecholamines and thereby could regulate the cytochrome b561 domain function (PubMed:15022831). DOMON domain could bind one heme b (PubMed:19386804).
messages: May act as a catecholamine-responsive trans-membrane electron transporter.
messages: Membrane

3702:AT1G54020
gene id: 3702:AT1G54020
uniprot id: A0A1P8AQR4
uniprot id: Q9C5N8
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: May be due to a competing acceptor splice site.
messages: Secreted

3702:AT5G53730
gene id: 3702:AT5G53730
uniprot id: A0A178UFX4
uniprot id: Q9FI03
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Endoplasmic reticulum membrane
messages: Expressed in the vasculature of roots, rosette leaves, stems, cauline leaves and flowers. Specifically expressed in phloem.
messages: Induced by senescence (PubMed:14617064). Down-regulated by sucrose, glucose and fructose (PubMed:23715470).
messages: Involved in the regulation of sugar, amino acid and some primary metabolite export from companion cells (CCs) to sieve elements (SEs) in phloem. Required for apoplastic phloem sugar loading in source leaves in order to transport it to sink tissues. Required for correct sugar partitioning between source leaves and sink organs.
messages: Membrane
messages: No visible phenotype under normal growth conditions.
messages: Plants over-expressing NHL26 exhibit slow growth, accumulate high levels of carbohydrates in mature leaves, have increased shoot biomass, decreased root biomass and decreased seed yield.
messages: plasmodesma

3702:AT2G43090
gene id: 3702:AT2G43090
uniprot id: Q9ZW85
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LeuD family.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (PubMed:19597944). Plays an essential role in leucine biosynthesis (PubMed:19597944, PubMed:20663849, PubMed:24608865, PubMed:32612621). Functions in both the biosynthesis of leucine, and in the methionine chain elongation pathway of aliphatic glucosinolate formation (PubMed:24608865). Plays an essential role in female gametophyte development (PubMed:19597944, PubMed:20663849, PubMed:24608865).
messages: Embryonic lethality when homozygous.
messages: Expressed at low levels in roots, root tips, at the basis of the hypocotyls, and in emerging leaves (PubMed:24608865). In young seedlings, expressed in cotyledon epidermal cells (PubMed:32612621). In hypocotyls, expressed in peripheral cells (PubMed:32612621). In seedling roots, expressed in the epidermis, including root hairs, and throughout the cortex (PubMed:32612621). In rosette leaves, expressed in the upper and lower epidermis (PubMed:32612621). In roots of adult plants, expressed in the root tips and cortex of the mature root enclosing the stele (PubMed:32612621). In flowering stalks, expressed in the epidermis (PubMed:32612621). Expressed in the carpel epidermis (PubMed:32612621).
messages: Heterodimer of the large LEUC/IIL1 subunit and the small LEUD (SSU1, SSU2 or SSU3) subunits.
messages: Plants silencing SSU1 exhibit stunted growth, narrow pale leaf blades with green vasculature, abnormal leaf adaxial-abaxial patterning, and abnormal flower morphology.
messages: Plastid
messages: chloroplast stroma

3702:AT1G03445
gene id: 3702:AT1G03445
uniprot id: A0A178WIX8
uniprot id: A0A1P8AQ82
uniprot id: Q9LR78
names: Activity Regulation
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by phosphorylation at Ser-764 by CDG1.
messages: Belongs to the PPP phosphatase family. BSU subfamily.
messages: Binds 2 manganese ions per subunit.
messages: Interacts with CDG1, CDL1 and ASK7/BIN2.
messages: Mainly expressed in young, elongating tissues. In young seedlings, it is expressed at the base of the hypocotyl, at the tip and most peripheral cell layers of cotyledons, and in the vascular cylinder of roots, particularly in the elongation zone and at the point of emergence of lateral roots. In mature plants, it is still present in the root vasculature, but almost completely absent in fully expanded stems and leaves. In flowers, it is mainly expressed in sepal veins, anther filaments, and in the style, suggesting that BSU1 is expressed in actively growing regions and apparently enriched in vascular tissues.
messages: Nucleus
messages: Phosphatase that acts as a positive regulator of brassinosteroid (BR) signaling (PubMed:14977918, PubMed:21855796). Dephosphorylates BES1, a transcription factor that regulates the expression of BR-response genes, thereby playing an important role in the regulation of response to BRs (PubMed:14977918). Inactivates the negative regulator of BR signaling ASK7/BIN2 by dephosphorylation at 'Tyr-200' (PubMed:21855796).
messages: Phosphorylated at Ser-395 and Ser-444. Phosphorylated at Ser-764 by CDG1 and CDL1.

3702:AT4G38800
gene id: 3702:AT4G38800
uniprot id: Q9T0I8
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
messages: Enzyme of the methionine cycle that catalyzes the irreversible cleavage of the glycosidic bond in 5'-methylthioadenosine (MTA) to adenine and 5'-methylthioribose (PubMed:19249293, PubMed:18342331). Contributes to the maintenance of AdoMet homeostasis and is required to sustain high rates of ethylene synthesis. Inactive towards S-adenosylhomocysteine (SAH/AdoHcy) (PubMed:18342331, PubMed:19249293).
messages: Expressed in roots, leaves, stems, cauline leaves and flowers.
messages: Homodimer (PubMed:19249293, PubMed:16909418). Interacts with CBL3 in a calcium-dependent manner.
messages: Inhibited by CBL3 in a calcium-dependent manner (PubMed:18945934). Inhibited by 5'-methylthiotubercidin (MTT) and by formycin A (FMA) (PubMed:18342331).
messages: No visible phenotype under normal growth condition. Not able to grow with methylthioadenosine (MTA) as unique source of sulfur.

3702:AT5G51600
gene id: 3702:AT5G51600
uniprot id: A0A178UES8
uniprot id: Q9FHM4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MAP65/ASE1 family.
messages: Cytoplasm
messages: Expressed in all tissues enriched in dividing cells, such as the root and shoot apical meristem, foliar primordia, and young leaves, and embryos.
messages: Forms a dimer (By similarity). Binds to microtubules (MT) during cell division. Bundles polymerized MT via the formation of 25-nm crossbridges with centrally located endocytic MT, and midline phragmoplast MT.
messages: Irregular root expansion. Defects in karyokinesis and cytokinesis. Cytokinesis defects before the embryo dermatogen stage and in roots. Embryos with enlarged nuclei, often containing multiple nucleoli. Some abnormal stomata with pores attached to a single side of the mother cell. Long root hairs. In roots, multinucleated cells, cell wall stubs, and synchronized cell divisions in incompletely separated cells. Normal anaphase spindle, but distorted phragmoplast. Abnormal formation of nematode-mediated giant cells leading to impaired maturation of nematode larvae.
messages: Microtubule-associated protein that plays a critical role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs. Essential for the cytokinesis, especially in roots, by maintaining the integrity of the overlapped microtubules in the phragmoplast. Required during root morphogenesis. Needed for giant cell development during root knot nematode infection, where cytokinesis is initiated but not completed.
messages: Nucleus
messages: Present in dividing tissues during all stages of embryonic development.
messages: phragmoplast

3702:AT1G80090
gene id: 3702:AT1G80090
uniprot id: Q8GXI9
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 5'-AMP-activated protein kinase gamma subunit family.
messages: Expressed highly in rosette leaves, cauline leaves, open flowers, developing siliques and dry seeds, but at a low level in stems and floral buds.
messages: No visible phenotype; probably due to a complementation by PV42b. Shorter siliques and reduced seed sets in pv42a and pv42b RNAi double mutant.
messages: Plays redundant role with PV42a in regulating male gametogenesis and pollen tube guidance.

3702:AT4G29100
gene id: 3702:AT4G29100
uniprot id: A0A178V0M1
uniprot id: A0A1P8B4W7
uniprot id: Q8S3D1
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT4G09180
gene id: 3702:AT4G09180
uniprot id: A0A178UYK3
uniprot id: Q9M0R0
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in flowers.
messages: Homodimer.
messages: Nucleus
messages: Sequencing errors.

3702:AT5G60600
gene id: 3702:AT5G60600
uniprot id: F4K0E8
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino phenotype and seedling lethal when homozygous. The phenotype is caused by an early arrest in chloroplast differentiation.
messages: Belongs to the IspG family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Circadian-regulated with a peak in the late period of dark phase and early period of the light phase.
messages: Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Is essential for chloroplast development and required for the salicylic acid (SA)-mediated disease resistance to biotrophic pathogens.
messages: Expressed in roots, shoots, leaves, flowers and siliques (at protein level).
messages: Homodimer.
messages: May be due to a competing donor splice site.
messages: chloroplast stroma

3702:AT1G50480
gene id: 3702:AT1G50480
uniprot id: Q9SPK5
names: Similarity
names: Subunit
messages: Belongs to the formate--tetrahydrofolate ligase family.
messages: Homodimer.

3702:AT5G41000
gene id: 3702:AT5G41000
uniprot id: A0A178UFR8
uniprot id: A0A1P8BD20
uniprot id: A0A1P8BD27
uniprot id: Q6R3K8
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YSL (TC 2.A.67.2) family.
messages: Induced during senescence.
messages: May be involved in the transport of nicotianamine-chelated metals.
messages: Membrane
messages: Up-regulated in autophagy mutant.

3702:AT4G33620
gene id: 3702:AT4G33620
uniprot id: A0A384KJM0
uniprot id: G8XR47
uniprot id: Q0WKV8
names: Caution
names: Function
names: Sequence Caution
names: Similarity
messages: Belongs to the peptidase C48 family.
messages: Intron retention.
messages: Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G42120
gene id: 3702:AT5G42120
uniprot id: Q9FHX3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici and to the bacteria Pseudomonas syringae, characterized by stronger necrotic symptoms.
messages: Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici and to the pathogenic bacteria Pseudomonas syringae.

3702:AT3G56600
gene id: 3702:AT3G56600
uniprot id: A0A1I9LRU9
uniprot id: Q0WMZ6
names: Function
names: Similarity
messages: Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily.
messages: The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3).

3702:AT4G39200
gene id: 3702:AT4G39200
uniprot id: A0A178UWL1
uniprot id: B3H4B6
uniprot id: Q9T029
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS25 family.

3702:AT2G28560
gene id: 3702:AT2G28560
uniprot id: Q9SK02
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RecA family. RAD51 subfamily.
messages: Induced by ionizing irradiation and treatment with a cross-linking reagent, cisplatin.
messages: May be due to an intron retention.
messages: May be involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents.
messages: Nucleus
messages: Preferentially expressed in flower buds and roots.

3702:AT2G47110
gene id: 3702:AT2G47110
uniprot id: A0A178VYW3
uniprot id: P59232
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family.
messages: In the N-terminal section; belongs to the ubiquitin family.
messages: Nucleus
messages: Ribosomal protein RSP27a-2 is a component of the 40S subunit of the ribosome.
messages: Ribosomal protein RSP27a-2 is part of the 40S ribosomal subunit.
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT2G24470
gene id: 3702:AT2G24470
uniprot id: A0A654EVQ2
uniprot id: Q9ZQ21
names: Similarity
messages: Belongs to the FPP family.

3702:AT4G35860
gene id: 3702:AT4G35860
uniprot id: Q38922
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT3G53880
gene id: 3702:AT3G53880
uniprot id: A0A178V926
uniprot id: A0A1I9LME6
uniprot id: Q9M338
names: Function
names: Similarity
messages: Belongs to the aldo/keto reductase family.
messages: Oxidoreductase that may act on a broad range of substrates such as ketosteroids, aldehydes, ketones and sugars.

3702:AT1G61460
gene id: 3702:AT1G61460
uniprot id: O64774
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Intron retention.

3702:AT4G25570
gene id: 3702:AT4G25570
uniprot id: A0A178UZ09
uniprot id: A0A384LK01
uniprot id: Q8L856
names: Cofactor
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds 2 heme b groups non-covalently.
messages: Expressed in roots, seedlings and leaves. Lower expression in flowers. Expressed in the L1 layer of the shoot apex, in the epidermis of leaf primordia and young leaves and in vascular bundles. In the differentiation zone of the root, detected in the pericycle and in the epidermis, but not in the cortex. Strongly expressed in the lateral part of the root cap and in the epidermis of the root tip, but not in the meristematic tissue. Not expressed in lateral roots. In mature embryos, expressed in the epidermis, cotyledon tips and root tips.
messages: Homodimer.
messages: Membrane
messages: Strong reduction in expression levels in flowers following fertilization.
messages: Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane ferric-chelate reduction. Able to use dihydrolipoic acid (DHLA) as an alternative substrate to ascorbate.
messages: Vacuole membrane

3702:AT1G05900
gene id: 3702:AT1G05900
uniprot id: A0A178W393
uniprot id: B9DFZ0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Nth/MutY family.
messages: Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.
messages: Binds 1 [4Fe-4S] cluster. The cluster does not appear to play a role in catalysis, but is probably involved in the proper positioning of the enzyme along the DNA strand.
messages: No effect on chloroplastic glycosylase-lyase/endonuclease activity, probably due to function redundancy.
messages: chloroplast nucleoid

3702:AT2G30550
gene id: 3702:AT2G30550
uniprot id: Q3EBR6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acylhydrolase with broad specificity (PubMed:19527719). Catalyzes the hydrolysis of phosphatidylcholine at the sn-1 position (PubMed:19527719). Possesses moderate activity toward phosphatidylcholine (PC), monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and triacylglycerol (TAG) (PubMed:19527719).
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Interacts with SBP1.
messages: Major isoform.
messages: No visible phenotype under normal growth conditions.
messages: Slightly induced by wounding (PubMed:18267087). Induced by wounding (PubMed:24430866, PubMed:31928671). Induced by cadmium and selenium in roots (PubMed:31928671).
messages: Widely expressed (PubMed:19527719). Highly expressed in leaves and stems (PubMed:19527719).
messages: chloroplast

3702:AT4G34870
gene id: 3702:AT4G34870
uniprot id: A0A178UWH6
uniprot id: Q42406
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Binds cyclosporin A (CsA). CsA mediates some of its effects via an inhibitory action on PPIase (By similarity).
messages: Cytoplasm
messages: Down-regulated by salt and cytokinin treatment.
messages: Interacts with A.tumefaciens VirD2.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: Ubiquitous, with higher levels in roots and flowers. Confined to vascular tissues. Also detected in stigmas, base of siliques and anthers.

3702:AT1G19115
gene id: 3702:AT1G19115
uniprot id: A0A1P8AQ88
uniprot id: B3H583
uniprot id: B3H791
uniprot id: Q1G3U5
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the LAZY family.
messages: Involved in the regulation of root gravitropism (PubMed:27748769). Functions redundantly with LAZY2 and LAZY4 in the control of root gravitropism (PubMed:27748769). Functions redundantly with LAZY1, LAZY2 and LAZY4 to control plant architecture by coupling gravity sensing to the formation of auxin gradients (PubMed:28821594).
messages: No visible phenotype under normal growth conditions (PubMed:27748769). Roots of plants lacking LAZY2, LAZY3 and LAZY4 exhibit a negative gravitropic response, and grow upward in the opposite direrction of root gravitropism (PubMed:27748769).
messages: Specifically expressed in roots (PubMed:28029738). Expressed in root tips of young seedlings (PubMed:28821594).

3702:AT2G33775
gene id: 3702:AT2G33775
uniprot id: A0A178VTZ9
uniprot id: Q6NME6
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Proteolytically cleaved, probably by S1P, a subtilisin-like serine protease (subtilase).
messages: Secreted

3702:AT1G21560
gene id: 3702:AT1G21560
uniprot id: A0A384LKJ3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G37880
gene id: 3702:AT4G37880
uniprot id: Q9T075
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Interacts with RANBPM.

3702:AT1G11475
gene id: 3702:AT1G11475
uniprot id: A0A178WP73
uniprot id: Q8LFJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal Rpo10/eukaryotic RPB10 RNA polymerase subunit family.
messages: Component of the RNA polymerase II, IV and V complexes. Interacts with NRPD1.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements.
messages: Nucleus

3702:AT1G09720
gene id: 3702:AT1G09720
uniprot id: F4I131
names: Function
names: Similarity
messages: Belongs to the NET family.
messages: Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex.

3702:AT2G45790
gene id: 3702:AT2G45790
uniprot id: A0A178W2D7
uniprot id: O80840
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the eukaryotic PMM family.
messages: Catalyzes the interconversion of mannose-6-phosphate to mannose-1-phosphate, the precursor for the synthesis of GDP-mannose (PubMed:17217471, PubMed:18086684). GDP-mannose is an essential sugar nucleotide for the synthesis of D-mannose-containing cell wall polysaccharides (galactomannans and glucomannans), glycolipids, glycoproteins and the antioxidant L-ascorbate (Probable). Can complement the yeast temperature-sensitive mutant sec53-6 (PubMed:17217471).
messages: Catalyzes the interconversion of mannose-6-phosphate to mannose-1-phosphate, the precursor for the synthesis of GDP-mannose. GDP-mannose is an essential sugar nucleotide for the synthesis of D-mannose-containing cell wall polysaccharides (galactomannans and glucomannans), glycolipids, glycoproteins and the antioxidant L-ascorbate.
messages: Cytoplasm
messages: Expressed in roots, stems, leaves, flowers and immature fruits.
messages: Homodimer.
messages: Overexpression of PMM increases total leaf ascorbate content.
messages: The thermosensitive lethality of pmm-12 results from glycosylation defects rather than ascorbic acid depletion.

3702:AT3G47520
gene id: 3702:AT3G47520
uniprot id: A0A654FEK4
uniprot id: Q9SN86
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organelle compartments (Probable). Plays a key role in the metabolism of dark chloroplasts and non-green plastids. Essential for embryo viability (PubMed:24198233, PubMed:24453164). Plays an essential role in heterotrophic metabolism in embryos, and autotrophic metabolism in photosynthetic tissues as well (PubMed:24453164).
messages: During pollen development, expressed in mature pollen grains and early in pollen-tube growth. Not expressed in immature pollen grains and fully grown pollen tubes (PubMed:24198233). During embryo development, expressed from the heart stage to mature embryo. Not expressed at the beginning of embryo development up to the globular stage (PubMed:24198233, PubMed:24453164).
messages: Embryonic lethality when homozygous due to embryo development arrest at globular stage.
messages: Expressed in rosette leaves (PubMed:20876337). Expressed in meristematic regions of roots and shoots, cotyledons, young leaves, trichomes, stamen, pollen, tapetum, gynoecium and ovules (PubMed:24198233).
messages: Homodimer.
messages: chloroplast stroma

3702:AT3G60280
gene id: 3702:AT3G60280
uniprot id: Q96316
names: Function
names: Subcellular Location Annotation
messages: Cell membrane
messages: Probably acts as an electron carrier involved in oxygen activation and/or lignin formation.

3702:AT5G40382
gene id: 3702:AT5G40382
uniprot id: Q9FNE0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 5C family.
messages: Mitochondrion inner membrane
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.

3702:AT1G44895
gene id: 3702:AT1G44895
uniprot id: A0A1P8APK6
names: Similarity
messages: Belongs to the MCM family.

3702:AT2G40670
gene id: 3702:AT2G40670
uniprot id: Q9SHC2
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARR family. Type-A subfamily.
messages: By cytokinin (BA) in roots.
messages: Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.
messages: Nucleus
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT4G15510
gene id: 3702:AT4G15510
uniprot id: O23403
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the psbP family.
messages: Highly expressed in very young leaves and then decreases with leaf age.
messages: Partially associated with photosystem I (PSI) complex, but is not a subunit of the complex. Interacts with PsaA and PsaB, but not with PasF.
messages: Photosystem I assembly factor that assists the proper folding and integration of PsaB and PsaA into the thylakoid membrane.
messages: Seedling lethal.
messages: chloroplast thylakoid lumen

3702:AT2G44150
gene id: 3702:AT2G44150
uniprot id: A0A178VNH9
uniprot id: Q945S8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
messages: Histone methyltransferase.
messages: Nucleus
messages: centromere

3702:AT2G29525
gene id: 3702:AT2G29525
uniprot id: Q56Y01
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sphingomyelin synthase family.
messages: Catalyzes the transfer of the phosphorylinositol group from phosphatidylinositol (PI) to phytoceramide, an essential step in sphingolipid biosynthesis.
messages: Membrane
messages: Mostly expressed in stems and flowers, and, to a lower extent, in leaves, roots and siliques.

3702:AT1G32780
gene id: 3702:AT1G32780
uniprot id: A0A178W8E9
uniprot id: A1L4Y2
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G53680
gene id: 3702:AT1G53680
uniprot id: A0A654EI69
uniprot id: Q9C8M3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT3G14350
gene id: 3702:AT3G14350
uniprot id: Q9LUL4
names: Disruption Phenotype
names: Domain
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cannot functionally replace STRUBBELIG.
messages: Expressed in seedlings, roots, stems, leaves, flowers and siliques.
messages: Membrane
messages: No visible phenotype.
messages: Over-expression of SRF7 led to male-sterility in cv. Columbia but not in cv. Landsberg.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT2G47990
gene id: 3702:AT2G47990
uniprot id: O82266
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in root tips and lateral root primordia. Present in young leaf and stem vascular tissues. Expressed throughout pollen development from very young floral buds to dehisced anthers, especially in microsporogenous cells, microspores, and mature pollen grains. In female reproductive organs, detected in megaspores and embryo sacs from one-nucleate to seven-celled embryo sacs.
messages: Embryo sac development arrest at two-, four-, or eight-nucleate stages, associated with abnormal nuclear numbers and positions in embryo sac, aberrant embryo sacs and unfused polar nuclei (PubMed:15634699). Disrupted progression of the mitotic division cycles of the female gametophyte leading to an impaired synchrony of female gametophyte development (PubMed:15980260). Reduced root growth and accumulation of unprocessed 18S pre-rRNA (PubMed:15980260).
messages: Essential protein required for nuclear division and organization during embryo sac development in female gametophyte, probably by promoting rRNA biogenesis essential for the progression of the mitotic division cycles during gametogenesis (PubMed:15634699, PubMed:15980260). Involved in nucleolar processing of pre-18S ribosomal RNA (PubMed:15980260).
messages: Expressed in cells undergoing active cell divisions, including functional megaspores and the female gametophytic cells. Accumulates in roots, stems, leaves, inflorescences and siliques.
messages: nucleolus

3702:AT1G49640
gene id: 3702:AT1G49640
uniprot id: Q9FX92
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in flowers and siliques.

3702:AT1G70510
gene id: 3702:AT1G70510
uniprot id: A0A1P8ANX6
uniprot id: P46640
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/KNOX homeobox family.
messages: Expressed predominantly in shoot apices of seedlings, in the receptacle and developing pistil of flowers and in axillary buds of inflorescence stems.
messages: May form heterodimeric complex with the TALE/BELL protein BEL1, BLH1 and BLH2. Interacts with OFP12 and OFP14. Interacts with BZIP30 (PubMed:27402171).
messages: May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'.
messages: Nucleus

3702:AT1G56250
gene id: 3702:AT1G56250
uniprot id: Q9C7K0
names: Disruption Phenotype
names: Function
names: Induction
names: Subunit
messages: By Agrobacterium.
messages: Component of SCF(VBF) E3 ubiquitin ligase complex that interacts with VIP1. Interacts directly with SKP1A and VIP1. Forms a complex composed of VIP1, VBF and Agrobacterium virE2.
messages: Component of SCF(VBF) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins such as VIP1 and Agrobacterium virE2, after their implication in T-DNA translocation to the host nucleus (can functionally replace Agrobacterium VirF). Required during Agrobacterium-induced tumor formation.
messages: Impaired Agrobacterium-mediated tumor formation.

3702:AT5G19172
gene id: 3702:AT5G19172
uniprot id: A0A178UGZ4
uniprot id: Q2V366
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02840
gene id: 3702:AT1G02840
uniprot id: O22315
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the splicing factor SR family. SR subfamily.
messages: Component of the spliceosome. Interacts with SNRNP35, RS2Z33, SR34, CYP59, CYP63 and CYP95. The binding to CYP63 is phosphorylation-dependent (PubMed:15166240). Interacts with MOS14 (PubMed:21738492).
messages: Extensively phosphorylated on serine residues in the RS domain.
messages: General splicing factor. Can promote splice site selection in vitro presumably by antagonizing the effects of the A1 heterogeneous nuclear ribonucleoprotein. May have an essential function during early plant development.
messages: Nucleus speckle
messages: The splicing pattern of the pre-mRNA is regulated in a tissue-specific manner and by development, and changes in response to various types of abiotic stresses and hormones (PubMed:10215626, PubMed:17319848).
messages: Ubiquitous.
messages: nucleoplasm

3702:AT2G42490
gene id: 3702:AT2G42490
uniprot id: A0A178VYJ2
uniprot id: Q8L866
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates during aging.
messages: Belongs to the copper/topaquinone oxidase family.
messages: Binds 1 copper ion per subunit (By similarity). Can also use zinc ion as cofactor (By similarity).
messages: Contains 1 topaquinone per subunit.
messages: Homodimer.
messages: Induced by salicylic acid (SA), jasmonic acid (MeJA), wounding, flagellin 22 (fgl22) and abcisic acid (ABA).
messages: Involved in putrescine catabolism in peroxisomes (PubMed:24287136). Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:23915037).
messages: Mostly expressed in flowers, and, at lower levels, in stems and leaves.
messages: Peroxisome
messages: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue.

3702:AT1G48220
gene id: 3702:AT1G48220
uniprot id: A0A178WL01
uniprot id: Q9SX57
names: Caution
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G03800
gene id: 3702:AT1G03800
uniprot id: A0A384KN67
uniprot id: Q08A59
uniprot id: Q9ZWA2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Contains a slightly degenerated ERF-associated amphiphilic repression (EAR) motif, which may be involved in the activity of transcriptional repression.
messages: Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity).
messages: Nucleus

3702:AT2G01830
gene id: 3702:AT2G01830
uniprot id: A0A178W0T1
uniprot id: A0A1P8B026
uniprot id: Q9C5U0
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by cytokinins to initiate phosphorelay signaling. This cytokinin-mediated activation is repressed by the trans-zeatin antagonists 6-(2-hydroxy-3-methylbenzylamino)purine (PI-55) and 6-(2,5-dihydroxybenzylamino)purine (LGR-991).
messages: Autophosphorylated predominantly on His residues. Activation probably requires a transfer of a phosphate group between a His in the transmitter domain and an Asp of the receiver domain.
messages: Cytokinins (CK) receptor related to bacterial two-component regulators. Binds also the synthetic urea-type cytokinin thidiazuron, a potent defoliant and herbicide. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. In the presence of cytokinin, feeds phosphate to phosphorelay-integrating histidine phosphotransfer protein (HPt) and activates subsequent cascade. In the absence of cytokinin, removes phosphate from HPt proteins, decreasing the system phosphoload. Involved in meristems establishment in seedlings. Acts as a redundant negative regulator of drought and salt stress responses, and abscisic acid (ABA) signaling in a cytokinin-dependent manner. Required to set vascular asymmetric cell divisions that establish phloem and procambium cell lines. Redundant positive regulator of cytokinin signaling that regulates many developmental processes including seed germination, cell division, seed size, chlorophyll retention during leaf senescence, root repression and shoot promotion. Can interact with isoprenoid-type cytokinins trans-zeatin (tZ and tZR), isopentenyladenine (iP), and isopentenyladenosine (iPR), the meta hydroxylated derivative of benzyladenine m-topolin, buta-2,3-dienyladenine (HA-8), penta-2,3-dienyladenine (HA-1), 4-methyl-penta-2,3-dienyladenine (HA-10), 4-hydroxy-2-butynyladenine (RM1), 2-butynyladenine (RM6), and to a lower extent, with cis-zeatin (cZ), zeatin riboside and dihydrozeatin (DZ). Together with AHK3, involved in the cytokinin-dependent responses to Pi starvation and sucrose stresses. Required for the formation of auxin-transporting vascular tissues in the hypocotyl, and primary and lateral roots, but not in adventitious roots, thus leading to auxin basipetal transport that regulates root de…
messages: Endoplasmic reticulum membrane
messages: Expressed specifically in the vasculature since the early stages of embryogenesis. At the globular stage of embryogenesis, detected in the four innermost cells, which are the precursors of the vascular tissue. During the heart, torpedo, and nearly mature stages, expressed in the procambium of the cotyledon shoulders, prospective hypocotyl, and embryonic root. In seedlings, mainly localized in meristematic tissues (e.g. shoot apical meristem SAM, root tips, and growing leaf and lateral root primordia), especially in vasculature. Present in all the vasculature and the shoot apical meristem (SAM) of the adult plant. In flowers, localized in carpels and developing ovules. In the root tips, expressed in the central cylinder.
messages: Homodimer. Interacts with AHP1, AHP2, AHP3, AHP5, AHK3, AMPD, FBR12, WNK5 and At4g15630.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mostly expressed in roots, specifically in the vascular cylinder and pericycle, and, to a lower extent, in leaves and flowers. Present in seedlings.
messages: Rapidly induced by dehydration. Down-regulated by Pi starvation and induced by cytokinins.
messages: Reduced sensitivity to cytokinin (mostly in shoots). Narrow vascular cylinder composed mainly of protoxylem cell files, with no apparent metaxylem or phloem. Hypersensitivity to ABA. Strong drought and salinity tolerance only in the presence of CK. Reduced cytokinin repression of several Pi starvation-responsive genes and increased sucrose sensitivity. More rapid germination, reduced requirement for light, and decreased far-red light sensitivity. Reduced sensitivity to N-isobutyl decanamide. Impaired benzyladenine (6-BA)-mediated repression of the iron uptake pathway. Impaired meristematic development in seedlings.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35340
gene id: 3702:AT2G35340
uniprot id: F4IJV4
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. PRP2 sub-subfamily.
messages: Embryo defective. Arrested at one-cell zygotic stage.
messages: May be involved in pre-mRNA splicing.
messages: Predominantly expressed in flowers.

3702:AT3G57690
gene id: 3702:AT3G57690
uniprot id: Q8S2W4
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AG-peptide AGP family.
messages: Cell membrane
messages: Contains 4-hydroxyproline; hydroxylated on Pro-29, Pro-31 and Pro-33.
messages: Expressed in pollen grains.
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.
messages: Up-regulated by AHL16/TEK.

3702:ArthCp011
gene id: 3702:ArthCp011
uniprot id: A0A1B1W4T3
uniprot id: P56797
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS2 family.
messages: chloroplast

3702:AT5G67310
gene id: 3702:AT5G67310
uniprot id: Q8GZ20
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT1G50250
gene id: 3702:AT1G50250
uniprot id: A0A178W3Y5
uniprot id: Q39102
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds 1 zinc ion per subunit.
messages: By high light.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the N-terminal section; belongs to the AAA ATPase family.
messages: Interacts with CHIP and HSP70. Heterohexamers with FTSH2, FTSH5 and FTSH8.
messages: Low expression in cotyledons, increasing with leaves development.
messages: No visible changes in phenotype, probably due to a complementation by FTSH5. The presence of both FTSH1 or FTSH5 (subunit type A) and FTSH2 or FTSH8 (subunit type B) is essential for an active complex formation.
messages: Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions.
messages: The FTSH1 precursor is ubiquitinated by CHIP in the cytoplasm.
messages: Ubiquitous.
messages: chloroplast thylakoid membrane

3702:AT1G28690
gene id: 3702:AT1G28690
uniprot id: Q1PFQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT1G71020
gene id: 3702:AT1G71020
uniprot id: Q9C9A6
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G35140
gene id: 3702:AT1G35140
uniprot id: Q9C6E4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EXORDIUM family.
messages: By brassinolide.
messages: May play a role in a brassinosteroid-dependent regulatory pathway that controls growth and development under low carbon and energy availability.
messages: No visible phenotype under normal growth conditions, but mutant plants show diminished biomass production under low carbon and energy conditions.
messages: Secreted
messages: apoplast
messages: extracellular space

3702:AT4G24910
gene id: 3702:AT4G24910
uniprot id: Q9SW35
names: Subcellular Location Annotation
messages: Golgi apparatus membrane
messages: Membrane

3702:AT5G43450
gene id: 3702:AT5G43450
uniprot id: A0A1P8BH67
uniprot id: Q9LSW6
names: Cofactor
names: Induction
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By ethylene. Slightly induced in leaf blades in low light intensities.

3702:AT5G13480
gene id: 3702:AT5G13480
uniprot id: Q6NLV4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: At globular stage, expressed throughout the embryo, endosperm and surrounding maternal seed tissue. From the heart-stage, expression restricted to the embryo and the funiculus.
messages: Embryo lethal.
messages: Expressed in embryos, in shoot and root meristems and in the vasculature.
messages: Interacts transiently (via the PPLPP motifs) with FCA (via the WW domain). Interacts with CPSF73-I, CPSF73-II, CPSF100 and CPSF160 in the CPSF complex. The FCA/FY interaction leads to changes in FY/CPSF complex composition.
messages: Nucleus
messages: Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for the negative autoregulation of FCA expression. Acts probably as an RNA 3' end-processing factor. Required for growth and development in plants.

3702:AT1G49170
gene id: 3702:AT1G49170
uniprot id: A0A178W6G2
uniprot id: Q6NQG5
names: Similarity
messages: Belongs to the UPF0235 family.

3702:AT4G32850
gene id: 3702:AT4G32850
uniprot id: A0A178UUT9
uniprot id: Q8VYW1
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the poly(A) polymerase family.
messages: Binds 2 magnesium ions. Also active with manganese.
messages: Essential protein (PubMed:19956626). Polymerase that creates the 3'-poly(A) tail of mRNA's (PubMed:15297145). Also required for the endoribonucleolytic cleavage reaction at some polyadenylation sites. May acquire specificity through interaction with a cleavage and polyadenylation specificity factor (CPSF) at its C-terminus (By similarity).
messages: Incomplete sequence.
messages: Lethal.
messages: Monomer (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits CFIS2, FIPS3, PAPS1, PABN1, PABN2, PABN3 and FIPS5 (PubMed:16282318, PubMed:18479511).
messages: Mostly expressed in flowers (very active in pollen, sepals, styles, and stigmas), cotyledons and hypocotyls, and, to a lower extent, in roots (confined to the vascular tissue in the radicle) and leaves (in the vascular tissue and leaf petioles). Barely detected in stems (PubMed:15297145, PubMed:19956626). Active in the primary and secondary root systems (PubMed:19956626).
messages: Nucleus
messages: Polymerase that creates the 3'-poly(A) tail of mRNA's.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G13782
gene id: 3702:AT3G13782
uniprot id: A0A178VHH5
uniprot id: F4JEI8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the nucleosome assembly protein (NAP) family.
messages: Can form homomeric and heteromeric protein complexes with NAP1;1, NAP1;2 and NAP1;3. Binds histone H2A.
messages: Cytoplasm
messages: Expressed in the root segment covering the apical end of the differentiation zone, the elongation zone of the root and the mature pollen within the anthers of open flowers.
messages: May modulate chromatin structure by regulation of nucleosome assembly/disassembly.
messages: Nucleus
messages: The acidic domain is probably involved in the interaction with histones.

3702:AT3G50130
gene id: 3702:AT3G50130
uniprot id: A0A384KJA1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G18440
gene id: 3702:AT3G18440
uniprot id: Q9LS46
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Expressed in hypocotyls, leaves, roots, flowers, sepals and stamina. In leaves, expressed almost exclusively in mesophyll cells.
messages: No visible phenotype.
messages: Slow activation by external aluminum.
messages: Vacuolar malate channel. Has a higher selectivity for malate than for fumarate. Exhibits also a weak chloride conductance.
messages: Vacuole membrane

3702:AT1G29970
gene id: 3702:AT1G29970
uniprot id: Q8L9S1
names: Caution
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL20 family.
messages: Probable non-functional duplication of the RPL18AA gene.

3702:AT2G45580
gene id: 3702:AT2G45580
uniprot id: A0A1P8AXS9
uniprot id: O64638
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT4G16765
gene id: 3702:AT4G16765
uniprot id: A0A1P8B7P9
uniprot id: A0A1P8B7Q0
uniprot id: A1A6I8
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT3G44490
gene id: 3702:AT3G44490
uniprot id: Q9LXN8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone deacetylase family.
messages: Nucleus
messages: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.

3702:AT1G63930
gene id: 3702:AT1G63930
uniprot id: Q9CAK4
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Roh' means corner in Czech.
messages: Interacts with EXO70A1 and EXO70C1.
messages: Mainly expressed in cells expanding in a polar manner such as pollen and root hairs.
messages: Membrane
messages: Reduced pectin deposition leading to reduced seed coat mucilage thickness (PubMed:20618910). Characteristic pattern of pectin deposition to the corners of seed coat volcano cells (PubMed:20618910).
messages: Required for seed coat mucilage deposition.

3702:AT5G40840
gene id: 3702:AT5G40840
uniprot id: A0A1P8B9P6
uniprot id: Q9FQ20
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the rad21 family.
messages: Component of the cohesin complex.
messages: Intron 9 uses an acceptor splice site 3 nucleotides downstream of the one used in isoform 1.
messages: Low expression in shoots, buds, siliques, leaves and roots. Found in, but not limited to, actively dividing cells: in procambium, protoderm and ground meristem in roots, and in shoot and floral meristems.
messages: May be involved in sister chromatid cohesion during mitosis.
messages: Nucleus

3702:AT1G80450
gene id: 3702:AT1G80450
uniprot id: A0A5S9WW25
uniprot id: Q9M8L3
names: Function
names: PTM
names: Subcellular Location Annotation
messages: May modulate WRKY transcription factor activities.
messages: Nucleus
messages: Phosphorylated on serine residues by MPK6.

3702:AT5G67590
gene id: 3702:AT5G67590
uniprot id: Q9FJW4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Belongs to the complex I NDUFS4 subunit family.
messages: By cold.
messages: Complex I is composed of at least 49 different subunits. This is a component of the iron-sulfur (IP) fragment of the enzyme.
messages: Leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Sugar-sensitive germination, delayed growth, modified respiration pathway, and altered stress responses.
messages: Mitochondrion inner membrane

3702:AT4G11310
gene id: 3702:AT4G11310
uniprot id: A0A5S9XRJ7
uniprot id: Q9SUT0
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the peptidase C1 family.
messages: Expressed in inflorescences.
messages: Probable thiol protease.

3702:AT1G62770
gene id: 3702:AT1G62770
uniprot id: Q9SI72
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Highly expressed in roots and etiolated hypocotyls. Expressed in seedlings, leaves, stems, siliques, floral buds and mature seeds.
messages: Pectin methylesterase (PME) inhibitor that probably targets root-expressed PME, regulates de-methylesterification of pectins in roots and affects root growth.
messages: apoplast

3702:AT2G32440
gene id: 3702:AT2G32440
uniprot id: A0A384KBX4
uniprot id: Q058Q0
uniprot id: Q9C5Y2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Catalyzes three successive oxidations of ent-kaurenoic acid giving gibberellin 12 (GA12), a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development.
messages: Endoplasmic reticulum membrane
messages: Widely expressed. Highly expressed in influorescence stem, influorescence, and silique tissue. Weakly expressed in cauline and rosette leaves. Expressed at a weaker level in stem and influorescence than AtKAO1/CYP88A3.

3702:AT1G01380
gene id: 3702:AT1G01380
uniprot id: Q9LNI5
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in developing trichomes and non-root hair cells.
messages: MYB-type transcription factor involved in epidermal cell fate specification. Acts as a negative regulator of trichome development, by mediating lateral inhibition. Promotes the formation of hair developing cells in H position in root epidermis, probably by inhibiting non-hair cell formation.
messages: Nucleus
messages: Overexpression of ETC1 results in the suppression of trichomes and overproduction of root hairs, as observed for CPC, TRY, ETC2 and ETC3.

3702:AT5G49330
gene id: 3702:AT5G49330
uniprot id: Q9FJ07
names: Biotechnology
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in seedlings, cotyledons and young leaves.
messages: Flavonol-specific transcription activator involved in the regulation of several genes of flavonoid biosynthesis. Activates the expression of CHS, CHI, F3H and FLS1. Controls flavonol biosynthesis primarily in cotyledons and leaves (PubMed:17419845, PubMed:20731781). Confers tolerance to UV-B (PubMed:19895401).
messages: In seedlings, predominantly expressed in cotyledons. Restricted to the cotyledons and primary leaves.
messages: Nucleus
messages: Promotes flavonoid biosynthesis in a light-dependent manner when expressed in tobacco (Nicotiana tabacum) through up-regulation of the biosynthetic genes.
messages: Reduced flavonols levels in leaves. The double mutants myb11 myb111 and myb12 myb111 and triple mutant myb11 myb12 myb111 accumulate less flavonols in roots, leaves, stems, inflorescence, and siliques (PubMed:20731781). The triple mutant myb11 myb12 myb111 is impaired in flavonols biosynthesis and exhibits a reduced UV-B tolerance (PubMed:17419845, PubMed:19895401).
messages: Triggered by HY5 in response to light and UV-B.

3702:AT2G02140
gene id: 3702:AT2G02140
uniprot id: A0A178VP71
uniprot id: Q9ZUL8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Confers broad-spectrum resistance to pathogens.
messages: Secreted

3702:AT2G19790
gene id: 3702:AT2G19790
uniprot id: A0A5S9WZJ5
uniprot id: O82201
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 4 (AP-4) is a heterotetramer composed of two large adaptins (epsilon-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit) (By similarity). Interacts with EHD2 (PubMed:19936242).
messages: Belongs to the adaptor complexes small subunit family.
messages: Subunit of novel type of clathrin- or non-clathrin-associated protein coat involved in targeting proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.
messages: coated pit
messages: trans-Golgi network

3702:AT5G50400
gene id: 3702:AT5G50400
uniprot id: A0A1P8BA48
uniprot id: A0A654G9N9
uniprot id: Q5MAU8
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted

3702:AT2G46495
gene id: 3702:AT2G46495
uniprot id: A0A384KKB6
uniprot id: P0CH01
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G63640
gene id: 3702:AT5G63640
uniprot id: A0A178USH8
uniprot id: Q9FFQ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TOM1 family.
messages: Cytoplasm
messages: Membrane
messages: Might contribute to the loading of the ESCRT machinery.
messages: Preferentially expressed in siliques and cauline leaves.

3702:AT2G34555
gene id: 3702:AT2G34555
uniprot id: O64692
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Converts GA9/GA20 to GA51/GA29 and GA4/GA1 to GA34/GA8.
messages: Not expressed in the apex.
messages: Up-regulated by auxin and paclobutrazol.

3702:AT2G36310
gene id: 3702:AT2G36310
uniprot id: A0A5S9X4F7
uniprot id: Q9SJM7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the IUNH family.
messages: Cytoplasm
messages: Expressed ubiquitously in leaves, flowers, stems, pollen cells, root tip meristem and root vasculature.
messages: Homodimer (PubMed:30787180). Component of the NSH heterocomplex made of URH1/NSH1 and URH2/NSH2 which exhibits strong xanthosine nucleosidase activity (PubMed:30787180). Interacts with URH2 (PubMed:30787180).
messages: Involved in purine and pyrimidine breakdown rather than in pyrimidine salvage, especially in response to dark stress (PubMed:19293370, PubMed:21235647, PubMed:21599668, PubMed:30787180). Together with URH2, required for efficient inosine and xanthosine hydrolytic activities (PubMed:21599668, PubMed:30787180). Unable to use cytidine as a substrate (PubMed:19293370). Can use uridine, inosine, adenosine as well as the cytokinin derivative isopentenyladenine-riboside as substrates (PubMed:19293370). Hydrolyzes also xanthosine with high efficiency (PubMed:21235647).
messages: Normal seedling germination and plant growth and development in standard conditions, despite an abnormal accumulation in the roots of uridine and of other pyrimidine metabolites as well as of xanthosine, but no accumulation of inosine (PubMed:21599668). Accelerated senescence accompanied by marked accumulation of uridine and xanthosine under conditions of prolonged darkness leading to pale green/yellow plants due to increased chlorophyll degradation (PubMed:21235647). The roots of the double mutant urh1 urh2 accumulates strong levels of xanthosine (PubMed:21599668, PubMed:30787180).

3702:AT1G02930
gene id: 3702:AT1G02930
uniprot id: A0A178WN35
uniprot id: P42760
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: By dehydration stress, salicylic acid, ethylene, methyl jasmonate, auxin, H(2)O(2), copper, metolachlor, and the pathogens P.syringae and Hyaloperonospora parasitica. Induced by cadmium (PubMed:16502469).
messages: Involved in camalexin biosynthesis by probably catalyzing the conjugation of GSH with indole-3-acetonitrile (IAN). May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: No visible phenotype under normal growth conditions, but reduced levels of camalexin production during infection by B.cinerea.
messages: cytosol

3702:AT4G11260
gene id: 3702:AT4G11260
uniprot id: A0A178UX37
uniprot id: Q9SUT5
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SGT1 family.
messages: By infection with the oomycete H.parasitica (downy mildew).
messages: Cytoplasm
messages: Delay in flowering time. Plants loose R gene resistance mediated by RPP2, RPP4, RPP5 and RPP7, and show reduced response to auxin, jasmonate and coronatine, and enhanced tolerance to heat shock.
messages: Interacts with RAR1 and HSP90-2. Interacts (via SGS domain) with HSC70-1 and HSC70-3.
messages: Involved in plant innate immunity. Is essential for resistance conferred by multiple R genes recognizing different oomycete pathogen isolates like avirulent H.parasitica (downy mildew). Contributes additively with RAR1 to RPP5-dependent resistance. Not required for RPM1, RPS2, RPS4 and RPS5-mediated resistance. Functions as negative regulator of RPS5 accumulation by assisting its degradation. May be involved in heat shock response by associating with HSC70-1 chaperone. Required for the SCF(TIR1)-mediated degradation of Aux/IAA proteins, but maybe not for SCF(TIR1) assembly or binding to its Aux/IAA substrates. Probably required for SCF-mediated ubiquitination, by coupling HSP90 to SCF complex for ubiquitination of HSP90 client proteins. Required for the coronatine/jasmonic acid-mediated signal transduction pathway.
messages: Nucleus

3702:AT1G17235
gene id: 3702:AT1G17235
uniprot id: A8MS09
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT1G31880
gene id: 3702:AT1G31880
uniprot id: A0A178W5W7
uniprot id: A0A1P8AWZ2
uniprot id: Q17TI5
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a regulator of cell proliferation and elongation in the root and shoot (PubMed:25049386, PubMed:28652362). Regulates roots architecture and primary root protophloem differentiation (PubMed:25049386, PubMed:28652362). BRX, BAM3, and CLE45 act together to regulate the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem (PubMed:23569225). Probable transcription regulator. Regulated by the auxin response factor ARF5. Polarly localized in vascular cells and subject to endocytic recycling. Required for CPD expression and for correct nuclear auxin response. Mediates cross-talk between the auxin and brassinosteroid pathways. BRX is a target for auxin-induced, proteasome-mediated degradation.
messages: Belongs to the BRX family.
messages: Cell membrane
messages: Expressed in the developing protophloem up to the elongation zone in root meristem of young seedlings, in the columella and the phloem vasculature throughout the root and in the phloem vasculature in the shoot (PubMed:23569225). Detected in the shoot meristem and in primordia. Low expression in stomata. Confined to sieve element precursor cells and to protophloem (PubMed:25049386).
messages: Homodimer and heterodimer with BRXL1. Interacts with NGA1 and ARF5.
messages: Impaired primary root protophloem differentiation. Short primary root and increased number of lateral roots (PubMed:25049386, PubMed:28652362). Absent sieve element precursor division, occurrence of gap cells lacking actin filament, associated with a reduction in the number of early dividing protophloem cells, in root meristem size and root growth; these phenotypes are partially rescued in plants also missing MAKR5 (PubMed:25049386, PubMed:28652362, PubMed:27354416). Patchy expression of SUC2 (PubMed:25049386). Reduced cotyledon and leaf size. Enhanced response to abscisic acid-mediated inhibition of root growth and insensitivity to cytokinin induced inhibition of lateral root initiation. The double mutant brx ops double mutant has strongly reduced root length and meristem size, with missing protophloem strands (PubMed:28652362). The disruption of BAM3 restores root protophloem and mersitem phenotypes observed in brx mutants (PubMed:23569225). Ectopic overexpression of BAM3 but slightly reduced CLE45 levels in root meristems (PubMed:23569225).
messages: Nucleus
messages: The DZC domain is necessary and sufficient for dimerization. A C-terminal fragment containing both DZC domains is able to rescue the short root phenotype. The N-terminal part (1-57) promotes BRX membrane association and is required for efficient degradation in the nucleus.
messages: The truncated variant in cv. Uk-1 results in short root phenotype.
messages: Ubiquitously expressed in early embryos and becomes restricted to the vasculature in the mature embryo and at later stages of development (PubMed:19465596). Expressed in roots developing protophloem, up to the end of the transition zone, as well as in the root tip meristem (PubMed:23569225).
messages: Up-regulated by auxin and down-regulated by brassinolide.

3702:ArthCp081
gene id: 3702:ArthCp081
uniprot id: A0A1B1W4Z5
uniprot id: P56805
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3702:AT3G44530
gene id: 3702:AT3G44530
uniprot id: A0A1I9LN40
uniprot id: A0A1I9LN41
uniprot id: F4J344
uniprot id: Q9LXN4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat HIR1 family.
messages: Component of the HIRA complex made of UBN1, UBN2, ASF1A, CABIN1 and HIRA (PubMed:25086063, PubMed:25600486). Binds to histone H3.3, UBN1, UBN2 and ASF1A (PubMed:25086063). Interacts with AS1 (PubMed:16243907).
messages: Expressed in the meristem and developing leaf primordia.
messages: Histone chaperone involved in maintining knox genes silencing throughout leaf development (PubMed:16243907). Involved in heterochromatic and euchromatic gene silencing, especially upon salt stress (PubMed:25600486). Involved in gene expression reprogramming during dedifferentiation probably by modifying histone H3.3 recruitment at the nucleolus (PubMed:25086063, PubMed:25600486). Contributes to maintenance of silencing of pericentromeric repeats and certain transposons (PubMed:25600486).
messages: Nucleus
messages: Plants are embryo lethal when homozygous (PubMed:16243907). Retarded root growth. Abnormal gene expression reprogramming during dedifferentiation in root-derived protoplasts (PubMed:25086063). Reduced fertility leading to less seeds production. Reduced histone H3 levels and decreases nucleosome occupancy at both actively transcribed genes and heterochromatic regions (PubMed:25600486).
messages: Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.
messages: nucleolus

3702:AT5G21150
gene id: 3702:AT5G21150
uniprot id: A0A5S9Y628
uniprot id: Q84VQ0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the argonaute family. Ago subfamily.
messages: Differentiation of multiple gametic cells able to initiate gametogenesis. Abnormally enlarged sub-epidermal cells in developing ovules.
messages: Expressed in all cells of the young ovule primordium at pre-meiotic stages, including the L1 layer. At early stages of female gametogenesis, expression is restricted to the distal (micropylar) portion of the developing ovule, but is absent from the 1-nuclear female gametophyte. In fully differentiated ovules, expressed at the proximal and distal poles but not in the female gametophyte.
messages: Expressed in embryonic shoot apex region, pollen and developing ovules.
messages: Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Main component of the RNA-induced silencing complex (RISC) that binds to a short guide RNA such as a microRNA (miRNA) or small interfering RNA (siRNA). RISC uses the mature miRNA or siRNA as a guide for slicer-directed cleavage of homologous mRNAs to repress gene expression. Associates preferentially with small RNAs of 24 nucleotide in length with a 5' terminal adenosine. Interacts with 24 nucleotide sRNAs derived from transposable elements (TEs). Required to silence pericentrometric-located TEs in female gametes and their accessory cells. Necessary to inactivate a significant proportion of long terminal repeat retrotransposons (LTRs) in the ovule. Required to specify cell fate in ovule. Involved in the control of female gamete formation by restricting the specification of gametophyte precursors in a dosage-dependent, non-cell-autonomous manner. Targeted by turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO9 function in RNA silencing.

3702:AT4G03415
gene id: 3702:AT4G03415
uniprot id: Q8GY60
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT5G06450
gene id: 3702:AT5G06450
uniprot id: Q9FNG3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 3'-to-5' exoribonuclease (RNase) specifically targeting single-stranded RNAs (PubMed:28463111). Triggers miRNA accumulation in RNA-induced silencing complex (RISC), composed of miRNAs and AGO proteins, by degrading uridylated cleavage fragments (PubMed:28463111). Required during plant growth and development (By similarity).
messages: Belongs to the RICE family.
messages: Cytoplasm
messages: Homohexamer with DnaQ-like exonuclease fold in a ring-shaped structure with a central cavity (PubMed:28463111, PubMed:23616405, PubMed:17850744). Component of AGO1 and AGO10-centered RNA-induced silencing complexes (RISC) (PubMed:28463111). Interacts with and acts as a cofactor of AGO1 and AGO10 (PubMed:28463111).
messages: Little effect on miRNAs levels (PubMed:28463111). Plants lacking both RICE1 and RICE2 have reduced miRNAs levels and lower miRNA retained by AGO1, thus leading to the up-regulation of targeted mRNA transcripts (PubMed:28463111).
messages: Restricted to shoot and root apical meristems, trichomes, and vascular veins.

3702:AT1G20190
gene id: 3702:AT1G20190
uniprot id: A0A178WC12
uniprot id: A0A1P8APG3
uniprot id: Q9LNU3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Expressed in the leaf, but not in the epidermis or in the vascular bundles.
messages: Membrane
messages: cell wall

3702:AT5G03455
gene id: 3702:AT5G03455
uniprot id: Q8GY31
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Arsenate reductase that plays a major role in the reduction of arsenate to arsenite and arsenic retention in roots (PubMed:16567632). Has an in vitro and in vivo arsenate reductase activity (PubMed:16507083, PubMed:16766666, PubMed:22562211). Plays no role in arsenic metabolism (PubMed:22879969, PubMed:25464340).
messages: Belongs to the MPI phosphatase family.
messages: Binds 1 zinc ion which is not required for enzyme activity (PubMed:15329414). Plants silencing ACR2 show increased sensitivity to arsenate but not arsenite (PubMed:16567632).
messages: Expressed in roots and at lower levels in shoots (at protein level). Expressed in leaves, stems and flowers.
messages: Inhibited by NSC95397.
messages: No visible phenotype under normal growth conditions, but plants show reduced root size when grown in presence of hydroxyurea (PubMed:20647223). No visible phenotype, but decreased accumulation of total arsenic in shoots (PubMed:16507083). No effect on arsenate sensitivity (PubMed:25099865). No effect on the accumulation of arsenate in roots, efflux of arsenite or uptake of arsenate, or the total arsenic accumulation in shoots (PubMed:22879969, PubMed:25464340).
messages: Nucleus
messages: Tyrosine protein phosphatase that dephosphorylates CDK complex and activate its kinase activity in vitro.

3702:AT1G67730
gene id: 3702:AT1G67730
uniprot id: A0A178WQ61
uniprot id: Q8L9C4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Beta-ketoacyl-coenzyme A reductase required for the elongation of fatty acids precursors of sphingolipids, triacylglycerols, cuticular waxes and suberin. Responsible for the first reduction step in very long-chain fatty acids (VLCFAs) synthesis. Decreased expression of KCR1 (RNAi) leads to plants with fused vegetative and reproductive organs, and abnormal trichome, epidermal cell and root morphology. Cannot be complemented by KCR2.
messages: Embryo lethal when homozygote.
messages: Endoplasmic reticulum membrane
messages: Expressed in embryos of different stages and young developing seedlings, but absent from mature seeds.
messages: Expressed in green siliques, flowers, inflorescence stems, leaves and roots.
messages: Part of the fatty acid elongase complex which contains a beta-ketoacyl-CoA synthase (KCS), a beta-ketoacyl-CoA reductase (KCR), a beta-hydroxyacyl-CoA dehydratase (HCD) and an enoyl-CoA reductase (ECR).

3702:AT5G39770
gene id: 3702:AT5G39770
uniprot id: F4KFU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XPF family.
messages: Interacts with EME1 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks and nicked Holliday junctions. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. May be required in meiosis for the repair of meiosis-specific double strand breaks subsequent to single-end invasion (SEI).
messages: Interacts with EME1.
messages: Nucleus

3702:AT1G70290
gene id: 3702:AT1G70290
uniprot id: A0A068FL15
uniprot id: A0A1P8AQ69
uniprot id: Q0WUI9
names: Similarity
names: Tissue Specificity
messages: Expressed in leaves, roots, stems and flowers.
messages: In the C-terminal section; belongs to the trehalose phosphatase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 20 family.

3702:AT3G12260
gene id: 3702:AT3G12260
uniprot id: A0A178VFH3
uniprot id: Q9LHI0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Belongs to the complex I LYR family.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane

3702:AT3G15860
gene id: 3702:AT3G15860
uniprot id: A0A384KAQ6
uniprot id: Q5XVB9
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G16535
gene id: 3702:AT2G16535
uniprot id: A8MR88
names: Similarity
names: Tissue Specificity
messages: Belongs to the MEG family.
messages: Expressed in flowers.

3702:AT4G17560
gene id: 3702:AT4G17560
uniprot id: A0A178UTS8
uniprot id: Q8W463
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: Located at the 30S-50S ribosomal subunit interface and binds directly to 23S ribosomal RNA.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT2G19120
gene id: 3702:AT2G19120
uniprot id: A0A178VLZ7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G05600
gene id: 3702:AT5G05600
uniprot id: A0A1P8BBY4
uniprot id: A0A5S9Y290
uniprot id: Q9FFF6
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: 2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway (PubMed:28760569, PubMed:28559313). Converts JA to 12-hydroxyjasmonate (12OH-JA), an inactive form of JA (PubMed:28760569, PubMed:28559313, PubMed:33516967). Is specific to free JA, and cannot oxidize the bioactive form jasmonoyl-L-isoleucine (JA-Ile) or other JA-amino acid conjugates (PubMed:28760569, PubMed:33516967). Prevents over-accumulation of JA and indirectly its bioactive form JA-Ile under stress response (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense signaling, by contributing to 12OH-JA accumulation, which represses JA defense responses upon infection by the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense responses upon infestation by the herbivorous caterpillar Mamestra brassicae (PubMed:28559313). May be involved in the catabolism of cytotoxic polycyclic aromatic hydrocarbons (PAHs) (PubMed:27637093).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Constitutive activation of stress-induced jasmonate-dependent responses and increased antifungal resistance to Botrytis cinerea (PubMed:28760569). The quadruple mutant jox1, jox2, jox3 and jox4 exhibit reduced root and shoot growth, delayed flowering, reduced seed production, constitutively elevated jasmonate and jasmonoyl-L-isoleucine levels, and enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae (PubMed:28559313). No visible phenotype under normal growth conditions, but mutant seedlings have increased tolerance to the cytotoxic compound phenanthrene.
messages: Induced by salt stress (PubMed:11351099). Induced by phenanthrene (PubMed:27637093). Down-regulated by UV-B (PubMed:17587374). Induced by wounding (PubMed:28760569). Induced by the infection with the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Induced by methyl jasmonate (MeJA) (PubMed:28559313). Induced by infestation with the caterpillar Mamestra brassicae (PubMed:28559313).

3702:AT2G24040
gene id: 3702:AT2G24040
uniprot id: A0A1P8AY72
uniprot id: A0A384LJH1
uniprot id: B6DVK0
uniprot id: O82232
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0057 (PMP3) family.
messages: Membrane

3702:AT1G47740
gene id: 3702:AT1G47740
uniprot id: A0A384KDS9
uniprot id: Q8RXP3
names: Similarity
messages: Belongs to the DeSI family.

3702:AT3G14070
gene id: 3702:AT3G14070
uniprot id: A0A7G2EKS5
uniprot id: Q9LJI2
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/calcium exchanger (CCX) subfamily.
messages: Endomembrane-localized H(+)-dependent K(+) and Na(+) transporter. May have a function associated with the pollen vacuole during tube elongation and polarized top growth.
messages: Endosome membrane
messages: Expressed in roots, leaves, stems and flowers.
messages: Membrane
messages: No visible phenotype.
messages: Up-regulated by exogenous Na(+), K(+) and Mn(2+).
messages: Vacuole membrane

3702:AT2G30790
gene id: 3702:AT2G30790
uniprot id: O49344
names: Caution
names: Similarity
messages: Belongs to the psbP family.
messages: Could be the product of a pseudogene. Created by a base pair loss in a duplication of PSBP1 (At1g06680). Not detected at the protein level in purified chloroplasts.

3702:AT1G60920
gene id: 3702:AT1G60920
uniprot id: Q9C960
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G36180
gene id: 3702:AT2G36180
uniprot id: Q9SJN6
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT4G12590
gene id: 3702:AT4G12590
uniprot id: A0A178UYA3
uniprot id: Q9SU27
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EMC3 family.
messages: Membrane

3702:AT4G31460
gene id: 3702:AT4G31460
uniprot id: A0A178UVJ7
uniprot id: Q9SV23
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

3702:AT3G20880
gene id: 3702:AT3G20880
uniprot id: Q8W030
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Nucleus
messages: Probable transcriptional regulator.

3702:AT1G51190
gene id: 3702:AT1G51190
uniprot id: Q5YGP7
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in the basal embryo region that gives rise to hypocotyl, root, and root stem cells. Expressed in the root meristem throughout embryo development.
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: By auxin accumulation.
messages: Expressed in roots, seedlings, flowers, and siliques. Also detected at low levels in leaves. In roots, specifically detected in the distal root meristem, including the QC. This tissue specificity is regulated by auxin gradient and depends on PIN proteins.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Master regulator of basal/root fate. Essential for root quiescent center (QC) and columella specification, stem cell activity, as well as for establishment of the stem cell niche during embryogenesis. Modulates the root polar auxin transport by regulating the distribution of PIN genes. Essential role in respecifying pattern and polarity in damaged roots. Direct target of the transcriptional corepressor TPL. Expression levels and patterns regulated post-transcriptionally by root meristem growth factors (RGFs).
messages: Stabilized in root meristems by reactive oxygen species (ROS) mediated oxidative post-translational modification triggered by RGF1 hormone peptide in a RITF1-dependent manner.

3702:AT1G17220
gene id: 3702:AT1G17220
uniprot id: A0A654EAL5
uniprot id: Q9SHI1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
messages: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity).
messages: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
messages: chloroplast

3702:AT5G03140
gene id: 3702:AT5G03140
uniprot id: Q9LYX1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici.
messages: Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici.

3702:AT1G43140
gene id: 3702:AT1G43140
uniprot id: P0CH31
names: Similarity
messages: Belongs to the cullin family.

3702:AT5G05470
gene id: 3702:AT5G05470
uniprot id: A0A654FYH9
uniprot id: Q9FE78
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the eIF-2-alpha family.
messages: Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.
messages: Heterotrimer composed of an alpha, a beta and a gamma chain.
messages: Phosphorylated at Ser-56 by GCN2 (Probable). Phosphorylated at Ser-317 and Ser-322 by CK2 (Probable).

3702:AT1G35420
gene id: 3702:AT1G35420
uniprot id: A0A178WLT2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G55805
gene id: 3702:AT1G55805
uniprot id: A0A178WRD0
uniprot id: Q682I1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BolA/IbaG family.
messages: Belongs to the bolA/yrbA family.
messages: Interacts in vitro with GRXS14, GRXS15, GRXS16 and GRXS17, but not with GRXC5 (PubMed:24203231). Interacts in vivo only with GRXS14 and GRXS16 (PubMed:24203231, PubMed:24714563).
messages: May act either alone or in interaction with glutaredoxin as a redox-regulated transcriptional regulator, or as a factor regulating Fe-S cluster biogenesis (Probable). The glutaredoxin-BOLA1 heterodimers bind a labile, oxygen sensitive iron-sulfur cluster (PubMed:24714563).
messages: The GRXS14-BOLA1 apo-heterodimer model derived from NMR data shows a domain arrangement totally different from the holo-heterodimer showing evidence for a Rieske-type ligation of a [2Fe-2S] cluster.
messages: chloroplast

3702:AT1G76260
gene id: 3702:AT1G76260
uniprot id: Q6NPN9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of the CUL4-RBX1-DDB1-DWA1/DWA2 E3 ubiquitin-protein ligase complex that acts as negative regulator in abscisic acid (ABA) signaling. May function as the substrate recognition module within this complex leading to ABI5 degradation. Functionally redundant with DWA1.
messages: Increased sensitivity to abscisic acid (ABA) and salt.
messages: Interacts with ABI5 and DDB1A and DWA1.
messages: Nucleus

3702:AT2G03530
gene id: 3702:AT2G03530
uniprot id: A0A178VPJ5
uniprot id: A0A1P8AZ26
uniprot id: A0A1P8AZ74
uniprot id: Q9ZQ89
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant ureide permease (TC 2.A.7.19) family.
messages: During seedling development, expression is hardly detected during the first 2 days after imbibition, and then increases to reach a peak after 9 days.
messages: Expressed in root xylem, cotyledons and leaves (PubMed:15308648). Expressed in leaf blades, petioles, trichomes, stems, flower stigma, the upper part of pedicels, sepals, and the top and bottom parts of carpels in siliques (PubMed:16738859).
messages: Membrane
messages: Proton-coupled transporter that transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Mediates high affinity transport of uracil and 5-fluorouracil (a toxic uracil analog). Mediates transport of free pyrimidines and may function during early seedling development in salvage pathways, by the utilization of pyrimidines from seed storage tissue.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G56610
gene id: 3702:AT5G56610
uniprot id: Q6NKR2
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein-tyrosine phosphatase family. Non-receptor class dual specificity subfamily.
messages: Exhibits phosphatidylglycerophosphate phosphatase activity (PubMed:29476828). Involved in root growth and columella cells organization (PubMed:29476828). May possess protein phosphatase activity (By similarity).
messages: Expressed at low levels in stems and flowers.
messages: Expressed in roots, leaves, stems and flowers.
messages: No visible phenotype in the double mutant ptpmt1-1 ptpmt2-1 (PubMed:29476828). But plants lacking PTPMT1, PTPMT2 and PGPP1 have strongly shorter roots associated with a defective order of columella cells in the root apices, with stronger effect than in the single mutant pgpp1-1 (PubMed:29476828).

3702:AT5G01305
gene id: 3702:AT5G01305
uniprot id: A0A178UDM7
uniprot id: A0A384K8T2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G03913
gene id: 3702:AT2G03913
uniprot id: Q2V4A8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G18810
gene id: 3702:AT1G18810
uniprot id: Q8GXS8
names: Function
names: Similarity
messages: Belongs to the PKS family.
messages: Probably involved in the phytochrome signaling pathway.

3702:AT2G24400
gene id: 3702:AT2G24400
uniprot id: A0A178VSZ5
uniprot id: Q9ZQ28
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT3G13840
gene id: 3702:AT3G13840
uniprot id: A0A178VGN4
uniprot id: Q9LRW3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in seedlings, roots and flowers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor involved in plant development.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G05170
gene id: 3702:AT2G05170
uniprot id: A0A5S9WX91
uniprot id: Q9SJ40
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the VPS11 family.
messages: Core component of at least two putative endosomal tethering complexes, the homotypic fusion and vacuole protein sorting (HOPS) complex and the class C core vacuole/endosome tethering (CORVET) complex.
messages: Core component of at least two putative endosomal tethering complexes, the homotypic fusion and vacuole protein sorting (HOPS) complex and the class C core vacuole/endosome tethering (CORVET) complex. Their common core is composed of the class C Vps proteins VPS11, VCL1, VPS18 and VPS33, which in HOPS further associates with VPS39 and VPS41 and in CORVET with VPS3 (PubMed:12589039, PubMed:29463724). Interacts directly with VPS39 and VPS3 (PubMed:29463724).
messages: Expressed in roots, leaves, stems, siliques and flowers.
messages: Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
messages: Prevacuolar compartment membrane
messages: Vacuole membrane

3702:AT1G08200
gene id: 3702:AT1G08200
uniprot id: Q9SGE0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Catalyzes the conversion of UDP-D-glucuronate to a mixture of UDP-D-apiose and UDP-D-xylose. D-Apiose (3-C-hydroxymethyl-d-erythrose) is the only plant cell wall monosaccharide with a branched carbon skeleton and is found in rhamnogalacturonan II (RG-II), apiogalacturonan, and several apioglycosides (By similarity).
messages: Cytoplasm
messages: Homodimer.

3702:AT3G02242
gene id: 3702:AT3G02242
uniprot id: B3H5Q2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Golven' means irregular waves in Dutch.
messages: Belongs to the RGF family.
messages: Binds to LRR receptor-like serine/threonine-protein kinases to trigger their dimerization with SERK proteins and subsequent signaling.
messages: Expressed in the root portion above the meristem, in sepals and pollen grains, and in cotyledons and leaves lamina, stipules and petioles.
messages: In primary roots and mature lateral roots (LRs), expressed in cortex and epidermis from the border of the maturation zone up to the colet (PubMed:23370719). Restricted to the nonhair cell files in the epidermis, but present in all cortical cells regardless of their position (PubMed:23370719). Induced during lateral root formation in mature lateral roots (PubMed:23370719). Patchy expression in cotyledons and leaves, but accumulates at the base of the cotyledon petioles and in stipules (PubMed:23370719). In flowers, irregular repartition in the sepals and pollen grains (PubMed:23370719).
messages: Secreted
messages: Shorter and fewer root hairs.
messages: Signaling peptide (root growth factor) that promotes root hairs formation and growth (PubMed:23370719). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (By similarity).
messages: The tyrosine sulfation is critical for the function of the peptide.

3702:AT3G22860
gene id: 3702:AT3G22860
uniprot id: A0A654FF60
uniprot id: F4J1N5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit C family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3702:AT1G72630
gene id: 3702:AT1G72630
uniprot id: A0A178WCV4
uniprot id: Q94BS8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EARLY FLOWERING 4 family.
messages: Component of the central CCA1/LHY-TOC1 feedback loop in the circadian clock that promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles.
messages: Follows a light-dependent circadian-regulated expression with a peak at midday, about 6 hours after dawn.
messages: Homodimer.
messages: Nucleus

3702:AT2G41680
gene id: 3702:AT2G41680
uniprot id: A0A178VZE7
uniprot id: O22229
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Dwarf plants with chlorotic leaves. Accumulation of Mg-protoporhyrin after feeding with 5-aminolevulinic acid.
messages: Homodimer.
messages: May homodimerize. Interacts with the 2-Cys peroxiredoxin BAS1.
messages: Thioredoxin reductase (TR) that exhibits both TR and thioredoxin (Trx) activities. Contains a C-terminal functional Trx domain. Functions as an electron donor for plastidial 2-Cys peroxiredoxins and participates in a NADPH-dependent hydrogen peroxide scavenging system in chloroplasts in the dark. Required for chlorophyll biosynthesis and biogenesis of the photosynthetic apparatus. Activates aerobic cyclase which converts Mg-protoporhyrin monomethyl ester into protochlorophyllide. Involved in a light-dependent regulation of starch biosynthesis by redox activation of the ADP-glucose pyrophosphorylase (AGPase), a central enzyme of starch synthesis.
messages: chloroplast

3702:AT4G37810
gene id: 3702:AT4G37810
uniprot id: A0A654FWG5
uniprot id: Q9T068
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Controls stomatal patterning.
messages: Secreted

3702:AT4G33280
gene id: 3702:AT4G33280
uniprot id: Q8RYD1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G66880
gene id: 3702:AT1G66880
uniprot id: F4HQ17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G30840
gene id: 3702:AT1G30840
uniprot id: A0A5S9WFN1
uniprot id: Q9SY29
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT3G19990
gene id: 3702:AT3G19990
uniprot id: A0A384KNV7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G07025
gene id: 3702:AT1G07025
uniprot id: F4HNW4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT1G09320
gene id: 3702:AT1G09320
uniprot id: Q500V5
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Abnormal transcription up-regulation of some transposable elements (TEs) and of hypermethylated loci (including MU1, GP1, SN1 and ERT7) (PubMed:30382101, PubMed:30425322). Hypomethylated DNA CHG and CHH regions (PubMed:30382101, PubMed:30425322). Reduced H3K9me2 levels (PubMed:30382101). Increased ratio of decondensed nuclei (PubMed:30425322).
messages: Expressed ubiquitously during vegetative stage, in meristems (e.g. root tips and shoot apical meristem), and in ovules and young seeds during reproductive stage.
messages: Heterochromatin-binding protein that preferentially occupies long transposons and specifically recognizes the histone H3 'Lys-9' methylation (H3K9me) marks, with a stronger affinity for dimethylated H3K9 (H3K9me2) (PubMed:30382101, PubMed:30425322). Required for transcriptional silencing, non-CG DNA methylation (e.g. CHG and CHH regions), and H3K9 dimethylation (H3K9me2) at some loci (PubMed:30382101, PubMed:30425322). Mediates heterochromatin phase separation and chromocenter formation (PubMed:30425322).
messages: Nucleus
messages: The tandem Agenet domains (AGDs) mediate the specific recognition of the histone 3 lysine 9 dimethylation (H3K9me2) mark.

3702:AT3G23790
gene id: 3702:AT3G23790
uniprot id: Q9LK39
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: May be involved in the activation of fatty acids to acyl-carrier-protein.
messages: chloroplast

3702:AT2G27385
gene id: 3702:AT2G27385
uniprot id: A0A178W168
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79990
gene id: 3702:AT1G79990
uniprot id: A0A178WGE9
uniprot id: F4HQE7
uniprot id: Q9CAA0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat COPB2 family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G61680
gene id: 3702:AT3G61680
uniprot id: Q7Y220
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Plants overexpressing PLIP1 exhibit stunted growth and accumulate anthocyanin under normal growth conditions.
messages: Reduced levels of oil seeds and delay in seed germination.
messages: Sn-1-specific phospholipase A1 involved in seed oil biosynthesis. Hydrolyzes polyunsaturated acyl groups from a unique chloroplast-specific phosphatidylglycerol (PG) that contains 16:1 delta 3-trans as its second acyl group. The polyunsaturated acyl groups released by PLIP1 are exported from the chloroplast, reincorporated into phosphatidylcholine (PC), and ultimately enter seed triacylglycerol (TAG). In vitro, possesses broad substrate specificity. Can hydrolyze the galactolipid monogalactosyldiacylglycerol (MGDG), and the phoshpolipids phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidic acid (PA), phosphatidylserine (PS) phosphatidylglycerol (PG) and phosphatidylinositol (PI).
messages: chloroplast thylakoid membrane

3702:AT1G52280
gene id: 3702:AT1G52280
uniprot id: Q9C820
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT1G67180
gene id: 3702:AT1G67180
uniprot id: A0A1P8ASS5
uniprot id: A0A384KLV6
uniprot id: A0A654ENB1
uniprot id: Q9ZW89
names: Caution
names: Subcellular Location Annotation
messages: Chromosome
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G52170
gene id: 3702:AT3G52170
uniprot id: A0A384KN25
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G65000
gene id: 3702:AT1G65000
uniprot id: A0A178WGM4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G20940
gene id: 3702:AT1G20940
uniprot id: Q9SYP3
names: Function
names: Subunit
messages: Interacts with DEK3.
messages: Probable component of an E3 ubiquitin ligase complex.

3702:AT5G41260
gene id: 3702:AT5G41260
uniprot id: A0A178UQ35
uniprot id: Q9FHD7
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with ASK7/BIN2, BSK1, BSK5, BSK6 and BSK11 (PubMed:23496207). Interacts with BSL2 (PubMed:24924143).
messages: Interacts with BRI1.
messages: Membrane
messages: Phosphorylated by BRI1, ASK7/BIN2 and ASK9/BIL2.
messages: Probable serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1. Functions redundantly with BSK3, BSK4, BSK6 and BSK7 (PubMed:23496207). Involved in the regulation of sucrose-phosphate synthase 1 (SPS1) in the context of sucrose resuply after starvation. Activates BSL2, a phosphatase that may dephosphorylate SPS1, leading to the activation of SPS1 (PubMed:24924143).
messages: Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.

3702:AT5G36890
gene id: 3702:AT5G36890
uniprot id: A0A654G6E3
uniprot id: Q9FIW4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Accumulates upon rhizobacteria-mediated (e.g. P.fluorescens WCS417r) induced systemic resistance (ISR) in root trichoblasts and, to a lesser extent, in cortical cells.
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Expressed at low levels predominantly in root epidermal cells.
messages: Glucosidase that hydrolyzes scopolin and various beta-glucosides, cellooligosaccharides (mainly cellotriose) and laminarioligosaccharides (PubMed:34965581). Can use p-nitrophenyl-beta-glucosides (pNP beta-Glc) and p-nitrophenyl-beta-D-fucosides (pNP beta-D-Fuc) as substrates, and, to a lower extent, beta-galactosides, beta-mannosides and beta-xylosides (PubMed:34965581). Involved in the secretion of root-derived phenolics upon iron ions (Fe) depletion (PubMed:25138267). Promotes disease resistance toward B.cinerea, H.arabidopsidis and P.syringae pv. tomato DC3000 (PubMed:25138267). Required during rhizobacteria-mediated (e.g. P.fluorescens WCS417r) broad-spectrum induced systemic resistance (ISR) against several pathogens (PubMed:25138267).
messages: Reduced secretion of root-derived phenolics upon iron ions (Fe) depletion, thus leading to their accumulation in the root interior. Impaired P.fluorescens WCS417r-mediated broad-spectrum induced systemic resistance (ISR) against several pathogens.

3702:AT4G18800
gene id: 3702:AT4G18800
uniprot id: Q9SN35
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Early endosome membrane
messages: Expressed in the vesicle-rich apical dome of growing root hairs.
messages: Intracellular vesicle trafficking and protein transport.
messages: trans-Golgi network membrane

3702:AT4G24780
gene id: 3702:AT4G24780
uniprot id: A0A384LJY2
uniprot id: Q5HZ35
uniprot id: Q9C5M8
names: Cofactor
names: Similarity
names: Tissue Specificity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.
messages: Expressed in flowers, but not in leaves.

3702:AT1G20575
gene id: 3702:AT1G20575
uniprot id: A0A178WDF9
uniprot id: Q9LM93
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycosyltransferase 2 family.
messages: Binds 1 divalent metal cation.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex composed of DPMS1, DPMS2 and DPMS3; in the complex interacts directly with DPMS3.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex.
messages: Endoplasmic reticulum
messages: Endoplasmic reticulum membrane
messages: Plants over-expressing DPMS1 show altered stem branch diameter and morphology, perturbation of the vascular bundle arrangements, wrinkled seed coat and constitutive endoplasmic reticulum stress response.
messages: Reduced root growth. Slight reduction of chlorophyll content. Wrinkled seed coat. Hypersensitivity to ammonium.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
messages: Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins; catalytic subunit of the dolichol-phosphate mannose (DPM) synthase complex. Plays a role in plant development and physiology, sensitivity to ammonium stress and endoplasmic reticulum stress response.

3702:AT3G58040
gene id: 3702:AT3G58040
uniprot id: A0A178VHN9
uniprot id: Q9M2P4
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:28351989, PubMed:32786047). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:28351989, PubMed:32786047). It probably triggers the ubiquitin-mediated degradation of different substrates (PubMed:28351989, PubMed:32786047). Mediates the proteasomal-dependent degradation of ATG6, a component of the autophagosome complex (PubMed:28351989). Requires TRAF1A/MUSE14 and TRAF1B/MUSE13 to target ATG6 for ubiquitination and subsequent regulation of autophagosome assembly (PubMed:28351989). Modulates directly the ubiquitination and proteasomal-dependent degradation of FREE1, a component of the ESCRT-I complex (PubMed:32786047, PubMed:32753431). Modulates directly the ubiquitination and proteasomal-dependent degradation of ELC/VPS23A, a component of the ESCRT-I complex (PubMed:32753431).
messages: Induced by drought stress, salt stress, osmotic shock and abscisic acid (ABA).
messages: Interacts with RAP2-2 (PubMed:17873090). Interacts with SINAT6 (PubMed:24350984). Interacts with ATG6 and TRAF1A (PubMed:28351989). Interacts with WAV3 (PubMed:22122664). Interacts with FREE1 (PubMed:32786047, PubMed:32753431). Interacts with ELC/VPS23A (PubMed:32753431).
messages: May be due to intron retention.
messages: No visible phenotype, may be due to the existence of 4 homologous proteins.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.
messages: autophagosome
messages: multivesicular body

3702:AT3G59350
gene id: 3702:AT3G59350
uniprot id: B9DFG5
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Tyr protein kinase family.
messages: Cell membrane
messages: Interacts with OXI1.
messages: Phosphorylated by OXI1.

3702:AT2G40010
gene id: 3702:AT2G40010
uniprot id: O04204
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: P0 forms a pentameric complex by interaction with dimers of P1 and P2.
messages: Phosphorylated.
messages: Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

3702:AT1G54250
gene id: 3702:AT1G54250
uniprot id: A0A178WK20
uniprot id: O81097
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
messages: Component of the RNA polymerase II and V complexes. Associates with the mediator complex.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerase V which mediates RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements.
messages: Nucleus

3702:AT4G11210
gene id: 3702:AT4G11210
uniprot id: A0A178V5P7
uniprot id: Q9T019
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT1G09900
gene id: 3702:AT1G09900
uniprot id: Q3EDF8
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT4G14850
gene id: 3702:AT4G14850
uniprot id: Q0WSH6
names: Function
names: Similarity
messages: Acts as a regulatory factor of isoprenoid biosynthesis. Could bind RNA.
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT5G10400
gene id: 3702:AT5G10400
uniprot id: A0A384L1I5
uniprot id: P59226
uniprot id: Q0WRA9
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Can be acetylated to form H3K9ac, H3K14ac, H3K18ac and H3K23ac. H3K9ac could compete with H3K9me and prevent gene silencing. H3K9acK14ac molecules are 30-fold less abundant than H3K9ac or H3K14ac. Very low level of H3K9meK14ac. H3K14 is specifically acetylated by HAG1 and deacetylated by HDA6. H3K9ac is deacetylated by HDT1. H3K9ac is restricted to euchromatin. H3K18ac, but not H3K9ac, is cell-cycle dependent and linked to replication. Reduced H4R3me2s increases H3K14ac in the FLC chromatin and activates or maintains its transcription. Vernalization decreases H3K9/14ac in the promoter region of FLC.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Expressed during the S phase.
messages: Expressed in inflorescences, buds and seedlings.
messages: In meta- and anaphase, H3T11ph is found on the entire length of the condensed chromosomes, whereas H3S10ph and H3S28ph are confined to the pericentromeric regions. During the first meiotic division, H3S10ph and H3S28ph are found on the entire length of the chromosome. Both sites may be involved in sister chromatid cohesion. No phosphorylation detected during interphase. AUR1 and AUR2 phosphorylate only H3S10, while AUR3 phosphorylates both H3S10 and H3S28.
messages: Mono-, di- or trimethylated to form mainly H3K4me1/2/3, H3K9me1/2/3, H3K27me1/2/3 and H3K36me1/2/3. Very low monomethylation at H3K18me1 or H3K23me1. H3K4me1/2/3, H3K9me3, H3K27me3 and H3K36me1/2/3 are typical marks for euchromatin, whereas heterochromatic chromocenters are enriched in H3K9me1/2 and H3K27me1/2. H3K27me3 is largely restricted to the transcribed regions of single genes and not associated with low-nucleosome density regions. SUVR1 to SUVR5, ASHH1 to ASHH3, ASHR1 to ASHR3, and ATXR5 and ATXR6 methylate H3, with ASHH2 methylating specifically H3K4 and H3K36 and ATXR5 and ATXR6 monomethylating specifically H3K27me1 (PubMed:35298257). The Su(var)3-9 homolog proteins (SUVH1 to SUVH10) are H3K9-specific methyltransferases. Among them, KRYPTONITE (SUVH4) is only involved in di- or trimethylation. Regarding H3K9, the major forms are H3K9me1 (20%) and H3K9me2 (10%), while H3K9me3 is rare (0.2%). H3K9me is controlled by DNA methylation and is not required for the formation of constitutive heterochromatin, but double methylation H3K9meK27me is required for the recruitment of CMT3 to methylate heterochromatin and silence euchromatic loci. Very low level of H3K9meK14ac. 60% of H3K27 is found under the form of H3K27me1, 16% of H3K27me2 and 5% of H3K27me3. When associated with H3K27me, H3K36 can only be mono- or di-methylated. H327me2K36me1 or H3K27me1K36me2 are both found in 3% of the proteins. When not associated with H3K27me, H3K36 is only trimethylated. H3K36me3 is found in 3% of the proteins. H2BK143ub1 is probably prerequisite for H3K4me. Elevated H3K4me3 and H3K36me2 formed by ASHH2 are required for high FLC expression. Vernalization increases H3K9me2 and H3K27me2/3 and decreases H3K4me2 at the FLC locus, resulting in the epigenetic silencing of this floral repressor.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. The H3K9meK27me dimethylated N-terminal tail of histone H3 can directly interact with the chromodomains of CMT3 and/or LHP1 (PubMed:11898023, PubMed:15457214). Interacts with ORTH2 (PubMed:17242155). Interacts (in absence of H3K27me) with TSK (PubMed:35298257).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4me1/2/3 = mono-, di- and trimethylated Lys-5; H3K9me1/2/3 = mono-, di- and trimethylated Lys-10; H3K9ac = acetylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14ac = acetylated Lys-15; H3K18ac = acetylated Lys-19; H3K18me1 = monomethylated Lys-19; H3K23ac = acetylated Lys-24; H3K23me1 = monomethylated Lys-24; H3K27me1/2/3 = mono-, di- and trimethylated Lys-28; H3S28ph = phosphorylated Ser-29; H3K36me1/2/3 = mono-, di- and trimethylated Lys-37.

3702:AT2G05520
gene id: 3702:AT2G05520
uniprot id: Q9SL15
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRP family.
messages: By salicylic acid. Transient induction by drought. Up-regulated by itself.
messages: GRP3 and GRP3S bind to WAK1, WAK3 and WAK5, but GRP2, GRP4,GRP6, GRP7 and GRP8 did not bind to any of the WAK isoforms.
messages: Interacts (via Cys-rich C-terminus) with WAK1 (via the extracellular domain). Component of a 500 kDa complex, composed of GRP3 or GRP3-S, WAK1 and KAPP.
messages: Predominantly expressed in leaves and stems.
messages: Regulates the function of the receptor protein kinase WAK1, and namely the phosphorylation of OEE2.
messages: The Cys-rich C-terminus (111-145) is essential for the interaction with WAK1.
messages: extracellular matrix

3702:AT1G07750
gene id: 3702:AT1G07750
uniprot id: Q9LQQ3
names: Similarity
messages: Belongs to the 11S seed storage protein (globulins) family.

3702:AT3G22790
gene id: 3702:AT3G22790
uniprot id: Q9LUI2
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NET family.
messages: Cell membrane
messages: Expressed in root meristems and at very low levels throughout mature vasculature.
messages: Interacts with F-actin.
messages: No visible phenotype, due to the redundancy with NET1B. Net1a and net1b double mutant shows a significant acceleration in root-cell expansion.
messages: Plant-specific actin binding protein. Associates with F-actin at the plasma membrane and plasmodesmata. May be part of a membrane-cytoskeletal adapter complex.
messages: The NAB domain, also called NAB (NET actin-binding) domain, is sufficient for F-actin binding.
messages: cytoskeleton
messages: plasmodesma

3702:AT5G59310
gene id: 3702:AT5G59310
uniprot id: A0A178URL2
uniprot id: Q9LLR6
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

3702:AT3G51070
gene id: 3702:AT3G51070
uniprot id: A0A1I9LMQ3
uniprot id: Q9SD39
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: This gene overlaps with At3g51075, a potential natural antisense gene.

3702:AT3G26840
gene id: 3702:AT3G26840
uniprot id: Q9LW26
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Accumulates upon nitrogen deprivation.
messages: Acyltransferase involved in fatty acid phytyl ester synthesis in chloroplasts, a process required for the maintenance of the photosynthetic membrane integrity during abiotic stress and senescence (PubMed:22623494). Exhibits phytyl ester synthesis and diacylglycerol acyltransferase activities with broad substrate specificities, and can employ acyl-CoAs, acyl carrier proteins, and galactolipids as acyl donors (PubMed:22623494).
messages: Belongs to the diacylglycerol acyltransferase family.
messages: Highly expressed during senescence.
messages: Plants lacking both PES1 and PES2 grow normally but show reduced phytyl ester and triacylglycerol accumulation.
messages: plastoglobule

3702:AT3G07130
gene id: 3702:AT3G07130
uniprot id: A0A178V743
uniprot id: A0A1I9LLI7
uniprot id: Q9SFU3
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis.
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in roots, stems, cotyledons, leaves, flowers and siliques.
messages: Homodimer.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G28230
gene id: 3702:AT2G28230
uniprot id: A0A178VT75
uniprot id: A0A1P8AZA2
uniprot id: Q6NPF4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 20 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
messages: Component of the Mediator complex.
messages: Nucleus

3702:AT2G16980
gene id: 3702:AT2G16980
uniprot id: A0A1P8B0J8
uniprot id: A0A1P8B0K3
uniprot id: A0A1P8B0L0
uniprot id: A0A1P8B0Q4
uniprot id: F4IMD7
uniprot id: F4IMD8
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G05720
gene id: 3702:AT3G05720
uniprot id: A0A654F618
uniprot id: Q9M9X7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the importin alpha family.
messages: Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (By similarity). Acts as cellular receptor for the nuclear import of the virD2 protein of Agrobacterium, but is not essential for Agrobacterium-mediated root transformation (PubMed:18836040).
messages: Binds to conventional NLS motifs.
messages: Forms a complex with importin subunit beta-1.
messages: Nucleus envelope

3702:AT1G20650
gene id: 3702:AT1G20650
uniprot id: A0A178W8H8
uniprot id: Q9LDZ5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: May be involved in plant defense signaling.
messages: Palmitoylation at Cys-3 and Cys-7 are required for plasma membrane location.

3702:AT2G30260
gene id: 3702:AT2G30260
uniprot id: A0A384K9Y7
uniprot id: O22922
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RRM U1 A/B'' family.
messages: Cajal body
messages: Component of the spliceosome where it is associated with snRNP U2.
messages: Cytoplasm
messages: Involved in nuclear pre-mRNA splicing.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleoplasm

3702:AT5G47930
gene id: 3702:AT5G47930
uniprot id: Q8L953
names: Cofactor
names: Induction
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS27 family.
messages: Binds 1 zinc ion per subunit.
messages: Down-regulated by UV-C treatment.

3702:AT4G15400
gene id: 3702:AT4G15400
uniprot id: O23393
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in response to brassinosteroids (BR) treatment (PubMed:22956280, PubMed:22544867). Induced by darkness in roots (PubMed:22544867).
messages: Belongs to the plant acyltransferase family.
messages: Cytoplasm
messages: Monitors brassinosteroids (BR) responses and homeostasis, particularly in the root and hypocotyl in darkness (PubMed:22956280, PubMed:22544867). Promotes flavonoid biosynthesis (PubMed:22956280).
messages: Mostly expressed in roots (particularly in the root elongation zone), and, to a lower extent, in seedling, leaves (especially in hydathodes), siliques (e.g. in developing seeds) and flowers.

3702:AT1G03150
gene id: 3702:AT1G03150
uniprot id: Q8LGI8
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the acetyltransferase family. ARD1 subfamily.
messages: Catalytic subunit of the NatB N-alpha-acetyltransferase complex. Involved in plant immunity through the regulation of SNC1 stability (PubMed:25966763).
messages: Reticulated leaves, early flowering and aborted or unfertilized ovules in siliques.

3702:AT5G54310
gene id: 3702:AT5G54310
uniprot id: Q9FL69
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abnormal vacuolar trafficking of soluble cargo proteins, and premature termination of the shoot apical meristem and of floral meristems leading to short siliques and abscission defect (PubMed:23771894, PubMed:25763490). Plant missing both AGD5 and MTV1 are severely dwarfed and have altered subcellular distribution of clathrin-coated vesicle (CCV) cargo exported from the trans-Golgi network (TGN) (PubMed:23771894). Floral organs remain attached to the plant body after the shedding of mature seeds, including abnormal petal breakstrength (pBS) (PubMed:23963677, PubMed:19429787, PubMed:20081191, PubMed:20230490). Ectopic enlargement of abscission zone (AZ) cells during shedding (PubMed:23963677). Impaired floral organ shedding associated with defects in the structure of the Golgi apparatus and extensive accumulation of vesicles adjacent to the cell walls in abscission zone regions (PubMed:19429787, PubMed:20081191, PubMed:20230490). Rescued by SOBIR1/EVR disruption, leading to premature shedding of floral organs and enlarge abscission zones (PubMed:20081191). Rescued by SERK1 disruption, leading to normal Golgi apparatus and endosome, as well as correct floral organ shedding (PubMed:20230490).
messages: Endosome
messages: Expressed in inflorescence stems, abscission zones, stigmas, roots, roots meristems, embryos, and floral and leaf vasculatures.
messages: GTPase-activating protein (GAP) for ADP ribosylation factor (ARF) (PubMed:19429787). Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN) (PubMed:23771894). Promotes plant growth (PubMed:23771894, PubMed:25763490). Involved in the regulation of membrane trafficking and cell separation during floral organ shedding and abscission (PubMed:19429787, PubMed:20081191, PubMed:20230490, PubMed:23963677). Prevents abscission zone (AZ) cells enlargement (PubMed:23963677, PubMed:25763490). Exhibits ARF-GTPase activity toward ARF1 at TGN (PubMed:21105926).
messages: Interacts with ARF1 at trans-Golgi network (TGN) (PubMed:21105926). Binds to clathrin heavy chain (PubMed:23771894).
messages: Strongly expressed in developing and mature embryos.
messages: clathrin-coated vesicle
messages: trans-Golgi network

3702:AT1G08290
gene id: 3702:AT1G08290
uniprot id: A0A654E9F2
uniprot id: Q9SGD1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Nucleus
messages: Probable transcriptional regulator.

3702:AT1G68320
gene id: 3702:AT1G68320
uniprot id: A0A178WLK6
uniprot id: Q9C9G7
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in leaves and flowers.
messages: Nucleus
messages: Slightly induced by salicylic acid (PubMed:16463103). Induced reversibly in response to phosphate (Pi) deficiency but repressed in the presence of Pi, specifically in the leaves. Availability of Pi increases with decreased levels (PubMed:19529828).
messages: Transcription repressor of phosphate (Pi) starvation-induced genes. Regulates negatively Pi starvation responses via the repression of gibberellic acid (GA) biosynthesis and signaling. Modulates root architecture, phosphatase activity, and Pi uptake and accumulation.

3702:AT2G01620
gene id: 3702:AT2G01620
uniprot id: Q9ZU90
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Required during the endosperm development in embryos.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and CUL1.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT1G71920
gene id: 3702:AT1G71920
uniprot id: B9DHD3
uniprot id: P0DI07
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
messages: Expressed in both vegetative and reproductive tissues.
messages: Homodimer.
messages: chloroplast

3702:AT1G54320
gene id: 3702:AT1G54320
uniprot id: A0A178WKH1
uniprot id: Q9SLK2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CDC50/LEM3 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Interacts with ALA2 and ALA3 in a heterologous system.
messages: Prevacuolar compartment membrane
messages: Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

3702:AT5G05160
gene id: 3702:AT5G05160
uniprot id: A0A178UQR1
uniprot id: Q9FHK7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: Probable leucine-rich repeat receptor-like protein kinase.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G23727
gene id: 3702:AT3G23727
uniprot id: A0A178VE53
uniprot id: P82631
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G53450
gene id: 3702:AT3G53450
uniprot id: A0A178V9S8
uniprot id: Q9LFH3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the LOG family.
messages: Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.
messages: Cytoplasm
messages: Expressed in roots and shoots. Detected in root procambium, lateral root primordia, vascular tissues of cotyledons, leaves and stems, shoot apical meristem, axillary buds, young inflorescences, fruit abscission zones and basal part of ovules.
messages: No visible phenotype under normal growth conditions; due to the redundancy with other LOG proteins.
messages: Nucleus

3702:AT5G65740
gene id: 3702:AT5G65740
uniprot id: A0A384L918
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02630
gene id: 3702:AT1G02630
uniprot id: A0A178W3N0
uniprot id: Q84XI3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.
messages: By nitrogen deficiency and 5-fluorouracil plus methotrexate.
messages: Cell membrane
messages: Expressed in stems, flowers and siliques.
messages: May be involved in nucleoside transport.
messages: Membrane

3702:AT5G59910
gene id: 3702:AT5G59910
uniprot id: A0A384KCB6
uniprot id: P40283
uniprot id: Q1H5F2
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK6ac, H2BK33ac and H2BK34ac.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Mono-, di- or trimethylated at the N-terminus to form H2BA1me1/2/3. H2BA1me2 and H2BA1me3 may be methylated and/or acetylated to form H2BA1me2K3me1, H2BA1me2K3me1K6ac, H2BA1me2K6ac and H2BA1me3K6ac.
messages: Monoubiquitinated by BRE1 to form H2BK143ub1 and deubiquitinated by UBP26. Required for heterochromatic histone H3 di- and trimethylation at H3K4me. May give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BA1me1/2/3 = mono-, di- and trimethylated Ala-2; H2BK3me1 = monomethylated Lys-4; H2BK6ac = acetylated Lys-7; H2BK33ac = acetylated Lys-39; H2BK34ac = acetylated Lys-40; H2BK143ub1 = monoubiquitinated Lys-146.

3702:AT1G64150
gene id: 3702:AT1G64150
uniprot id: A0A178WB27
uniprot id: Q94AX5
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GDT1 family.
messages: Defects in photosynthesis and reduced growth rate (PubMed:27302341, PubMed:27020959). Pale yellow leaves with reduced PSII activity (PubMed:27302341). Altered Ca(2+) and Mn(2+) partitioning in chloroplasts and reduced Mn(2+) binding to PSII (PubMed:27020959).
messages: Homodimer.
messages: Membrane
messages: Mn(2+)/H(+) exchanger, which transport Mn(2+)from the chloroplast stroma into the acidic thylakoid lumen (PubMed:27020959). Might be a chloroplast-localized Ca(2+)/H(+) antiporter (PubMed:27302341). Regulates Ca(2+), Mn(2+) and pH homeostasis (PubMed:27302341). Required for chloroplast development (PubMed:27302341).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Thylakoid
messages: chloroplast membrane

3702:AT4G15210
gene id: 3702:AT4G15210
uniprot id: A0A1P8B7H0
uniprot id: A0A5S9XSK2
uniprot id: P25853
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Almost complete loss of beta-amylase activity in rosette leaves and inflorescences (stems).
messages: Belongs to the glycosyl hydrolase 14 family.
messages: Beta-amylase activity. Major cytosolic beta-amylase isoform in rosette leaves and inflorescences stems.
messages: Circadian-regulated, with a peak in expression just before the light period in short day conditions.
messages: Cytoplasm
messages: Detected in phloem sieve elements.

3702:AT5G61580
gene id: 3702:AT5G61580
uniprot id: A0A178UCI3
uniprot id: Q9FKG3
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Allosterically activated by AMP.
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Expressed in leaves, stems and flowers.
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: chloroplast

3702:AT2G26400
gene id: 3702:AT2G26400
uniprot id: A0A1P8AZL0
uniprot id: A0A1P8AZL9
uniprot id: A0A1P8AZM1
uniprot id: O48707
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acireductone dioxygenase (ARD) family.
messages: Binds either 1 Fe or Ni cation per monomer. Iron-binding promotes an acireductone dioxygenase reaction producing 2-keto-4-methylthiobutyrate, while nickel-binding promotes an acireductone dioxygenase reaction producing 3-(methylsulfanyl)propanoate.
messages: Catalyzes 2 different reactions between oxygen and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
messages: Cytoplasm
messages: Nucleus

3702:AT2G39470
gene id: 3702:AT2G39470
uniprot id: O80634
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the psbP family.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (Probable). Required for accumulation of the chloroplast NAD(P)H dehydrogenase (NDH) complex (PubMed:17827269).
messages: No visible phenotype.
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits. Component of the NDH lumenal subcomplex, at least composed of PnsL1, PnsL2, PnsL3, PnsL4 and PnsL5.
messages: chloroplast thylakoid membrane

3702:AT5G39980
gene id: 3702:AT5G39980
uniprot id: Q9FLD8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: chloroplast

3702:AT2G37940
gene id: 3702:AT2G37940
uniprot id: A0A178VV03
uniprot id: Q9SH93
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sphingomyelin synthase family.
messages: By powdery mildew (e.g. Golovinomyces cichoracearum and Pseudomonas syringae) inoculation.
messages: Catalyzes the transfer of the phosphorylinositol group from phosphatidylinositol (PI) to phytoceramide, an essential step in sphingolipid biosynthesis (PubMed:19001565, PubMed:20309609). May play an important role in modulating plant programmed cell death (PCD) associated with defense (e.g. toward Golovinomyces cichoracearum) by promoting sphingolipid metabolism and thus regulating ceramide accumulation (PubMed:19001565).
messages: Constitutive RPW8-mediated HR-like cell death characterized by salicylic acid (SA) accumulation, enhanced transcription of RPW8 and RPW8-dependent spontaneous HR-like cell death (SHL) in leaf tissues. Reduced plant stature. Sphingolipid (e.g. ceramides and hydroxyceramides) accumulation associated with a reduced inositol-phosphorylceramide synthase (IPCS) activity.
messages: Expressed in leaves, roots, stems, flowers and siliques.
messages: Membrane
messages: trans-Golgi network membrane

3702:AT2G27500
gene id: 3702:AT2G27500
uniprot id: A0A178VMX7
uniprot id: Q9ZQG9
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: Cell membrane
messages: Cytoplasm
messages: Has no GPI-anchor.
messages: cell wall

3702:AT2G21210
gene id: 3702:AT2G21210
uniprot id: A0A178VRU6
uniprot id: A0A1P8AYM3
uniprot id: Q9SKP2
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT1G23410
gene id: 3702:AT1G23410
uniprot id: A0A178WHK4
uniprot id: P59271
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family.
messages: In the N-terminal section; belongs to the ubiquitin family.
messages: Nucleus
messages: Ribosomal protein RSP27a-1 is a component of the 40S subunit of the ribosome.
messages: Ribosomal protein RSP27a-1 is part of the 40S ribosomal subunit.
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT5G08000
gene id: 3702:AT5G08000
uniprot id: Q9SD84
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Able to bind (1->3)-beta-D-glucans (laminarin).
messages: Cell membrane
messages: Contains two additional disulfide bonds.
messages: Down-regulated by heat treatment.
messages: Expressed in the shoot apical region and in young leaves but also detected in the laminar and vasculature of mature leaves.
messages: plasmodesma

3702:AT5G62310
gene id: 3702:AT5G62310
uniprot id: Q9LE81
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Highly expressed in roots, elongating root hair cells and pollen grains.
messages: Modulates root tip growth. May play a common role in the tip growth of plant cells.
messages: Reduced root hair length.

3702:AT3G62260
gene id: 3702:AT3G62260
uniprot id: A0A178VJ36
uniprot id: A0A1I9LSG6
uniprot id: A0A654FK33
uniprot id: A0A7G2EZE6
uniprot id: Q3EAF9
names: Caution
names: Cofactor
names: Miscellaneous
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: May be due to a competing acceptor splice site.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G74770
gene id: 3702:AT1G74770
uniprot id: F4HVS0
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Binds zinc and iron ions.
messages: Membrane
messages: Nucleus
messages: Probable E3 ubiquitin-protein ligase that may regulate the response to iron deficiency and thus contributes to iron homeostasis.

3702:AT3G59810
gene id: 3702:AT3G59810
uniprot id: Q9M1Z3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the snRNP Sm proteins family.
messages: Component of LSM protein complexes, which are involved in RNA processing. Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. The cytoplasmic LSM1-LSM7 complex regulates developmental gene expression by the decapping of specific development-related transcripts. Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs) and is essential for accurate splicing of selected development-related mRNAs through the stabilization of the spliceosomal U6 snRNA. Plays a critical role in the regulation of development-related gene expression.
messages: Component of the heptameric LSM1-LSM7 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM1, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4. Component of the heptameric LSM2-LSM8 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM8, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM6A subunit interacts only with its two neighboring subunits, LSM3A or LSM3B and LSM5 (PubMed:23221597).
messages: Cytoplasm
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Nucleus

3702:AT3G12050
gene id: 3702:AT3G12050
uniprot id: A0A384LMS3
uniprot id: F4J8L7
uniprot id: Q9LHL7
names: Similarity
messages: Belongs to the AHA1 family.

3702:AT3G02720
gene id: 3702:AT3G02720
uniprot id: Q9M8R4
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the peptidase C56 family.
messages: Cys-120 and Cys-313 are oxidized to sulfinic acid.
messages: Homotrimer.
messages: Possesses glyoxalase I activity. Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. May be involved in oxidative stress response.

3702:AT2G18245
gene id: 3702:AT2G18245
uniprot id: A0A178VZN4
uniprot id: Q8S8G6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM53 family.
messages: Membrane
messages: Nucleus outer membrane

3702:AT3G62220
gene id: 3702:AT3G62220
uniprot id: A0A384KH06
uniprot id: Q9M1Q2
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT1G08080
gene id: 3702:AT1G08080
uniprot id: A0A5S9T9F2
uniprot id: Q8L817
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: N-glycosylated.
messages: Reversible hydration of carbon dioxide.
messages: chloroplast stroma

3702:AT1G76760
gene id: 3702:AT1G76760
uniprot id: Q6NPF9
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thioredoxin family. Plant Y-type subfamily.
messages: Expressed in roots and seeds.
messages: Expression increases in developing seeds and decreases during seed germination.
messages: Thiol-disulfide oxidoreductase that poorly activates chloroplastic malate dehydrogenase (NADP-MDH) and fructose-1,6-bisphosphatase. Provides reducing equivalents for peroxiredoxin Q.
messages: chloroplast stroma

3702:AT1G12730
gene id: 3702:AT1G12730
uniprot id: F4IDV8
uniprot id: Q94K70
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PIGU family.
messages: Component of the GPI transamidase complex. May be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G16080
gene id: 3702:AT3G16080
uniprot id: A0A1I9LRU8
uniprot id: A0A384LAJ1
uniprot id: Q0WW79
uniprot id: Q8LEM8
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL37 family.
messages: Binds 1 zinc ion per subunit.
messages: Binds to the 23S rRNA.
messages: Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.

3702:AT4G11150
gene id: 3702:AT4G11150
uniprot id: A0A5S9XRW2
uniprot id: Q39258
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase E subunit family.
messages: Expressed mainly in the endosperm and surrounding maternal tissues during seed development.
messages: Mutant embryos are lethal, displaying variably enlarged cells with multiple nuclei, large vacuoles containing inclusions, abnormal organization of Golgi stacks, and cell wall defects.
messages: Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. Required for Golgi organization and vacuole function in embryogenesis.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: Vacuole membrane

3702:AT3G57180
gene id: 3702:AT3G57180
uniprot id: Q8W4I6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family.
messages: Binds to chloroplast 16S and 23S ribosomal RNAs.
messages: Chlorotic dwarf mutant pale green in bpg2-1 and bpg2-2 (PubMed:19919572, PubMed:19889879, PubMed:22526496). Reduced sensitivity in the light to chlorophyll accumulation promoted by brassinazole (Brz), a specific inhibitor of the biosynthesis of brassinosteroids (BRs), via the suppression of Brz-induced chloroplast protein accumulation. Decreased number of stacked grana thylakoids in chloroplast, but more starch grains, and more and larger plastoglobules. Abnormal accumulation of precursors of chloroplast 16S and 23S rRNA (PubMed:19919572). Reduced level of chlorophyll and carotenoid pigmentation in plastids leading to defective photosystem II and altered photosystem I functions (PubMed:22526496).
messages: Induced by light, but repressed by dark (PubMed:19919572, PubMed:22526496). Up-regulated by the specific inhibitor of the biosynthesis of brassinosteroids (BRs) brassinazole (Brz) (PubMed:19919572).
messages: Mostly expressed in stems, petioles, leaves and flowers and, at low levels, also in roots.
messages: Required for brassinosteroid- (BR) mediated post-transcriptional and translational regulation in the chloroplast, including accumulation of chloroplast rRNA (PubMed:19919572). Involved in chloroplast differentiation (PubMed:19919572, PubMed:22526496).
messages: chloroplast stroma

3702:AT4G04570
gene id: 3702:AT4G04570
uniprot id: A0A1P8B6Z8
uniprot id: F4JGE0
uniprot id: Q9SYS3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT5G57850
gene id: 3702:AT5G57850
uniprot id: Q8L493
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Amino acid aminotransferase showing activity for D-Asp and D-Ala as amino donors with 2-oxoglutarate as an amino acceptor. Can also use D-Met, D-Tyr, D-Phe, D-Gln, D-Trp and D-Asn as substrates, but no activity with L-Asp, L-Ala, L-Leu, L-Ile or L-Val. Catalyzes also the reverse reaction where an amino group is transferred from D-Glu to pyruvate or oxaloacetate to produce D-Ala or D-Asp, respectively. Also involved in folate biosynthesis, acting as an aminodeoxychorismate lyase converting 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate (PABA)(PubMed:15500462).
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.
messages: Inhibited by hydroxylamine or amino-oxyacetic acid.
messages: chloroplast

3702:AT4G39340
gene id: 3702:AT4G39340
uniprot id: Q9T039
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant egg cell-secreted peptide family.
messages: Confined to the egg cell before fertilization, but disappears upon gamete fusion. Also present in zygotes and early embryos.
messages: Cytoplasmic vesicle
messages: Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
messages: Restricted to female reproductive tissues, specifically accumulating in storage vesicles of the unfertilized egg cell.
messages: Secreted

3702:AT2G34700
gene id: 3702:AT2G34700
uniprot id: A0A178W0Z3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G61590
gene id: 3702:AT5G61590
uniprot id: A0A178UNR8
uniprot id: Q9FKG2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT4G16566
gene id: 3702:AT4G16566
uniprot id: Q84VV6
names: Activity Regulation
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Peroxisome
messages: Possesses adenylylsulfatase activity in vitro, releasing AMP and sulfate from adenylyl sulfate. Possesses also adenosine 5'-phosphosulfate (APS) phosphorylase activity in vitro. Catalyzes the phosphorolysis of APS, leading to ADP and sulfate.
messages: The adenosine 5'-phosphosulfate phosphorylase activity is enhanced at low pH.

3702:AT1G76940
gene id: 3702:AT1G76940
uniprot id: A1A6K6
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Alternative splicing (AS) regulator that binds to specific mRNAs and modulates auxin effects on the transcriptome. Displaced from its targets upon binding to AS competitor long non-coding RNA (ASCO-RNA).
messages: Constitutively expressed.
messages: Expressed in root meristems, lateral root primordia and root vascular tissues.
messages: No visible phenotype. Nsra and nsrb double mutants are less sensitive to auxin.
messages: Nucleus speckle

3702:AT5G02310
gene id: 3702:AT5G02310
uniprot id: A0A1P8BFH3
uniprot id: F4KCC2
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the UBR1 family.
messages: Reduced seed germination potential and inhibition of seedling establishment by sucrose (PubMed:19255443). Exhibits abnormal shoot and leaf development (PubMed:19620738). Increased tolerance of seedlings to submergence and starvation (PubMed:25667318).
messages: Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
messages: Ubiquitin protein ligase which is a component of the N-end rule pathway with arginine specificity, and functions with the arginyltransferases ATE1 and ATE2. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation (PubMed:17572409, PubMed:19255443, PubMed:19620738, PubMed:22020282). Does not participate in degradation of proteins with N-terminal Phe or Leu (PubMed:17572409). The N-end rule pathway regulates seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination (PubMed:19255443). The N-end rule pathway regulates various aspects of leaf and shoot development (PubMed:19620738). Involved in the ubiquitination and subsequent degradation of RAP2-12, an activator of hypoxic gene expression. The ubiquitination occurs after the N-arginylation of RAP2-12 by ATE1 or ATE2 under aerobic conditions (PubMed:22020282). The end-rule pathway plays a role in regulating the timing and amplitude of the immune response following infection with the bacterial pathogen Pseudomonas syringae pv tomato (PubMed:27173012, PubMed:30117535). Regulates the biosynthesis of plant-defense metabolites such as glucosinolates, and the biosynthesis and response to the phytohormone jasmonate (JA), which plays a key role in plant immunity (PubMed:27173012). Controls the expression of specific defense-response genes, activates the synthesis pathway for the phytoalexin camalexin, and influences basal resistance to the hemibiotroph pathogen Pseudomonas syringae pv tomato (PubMed:30117535). Coordinates the mobilization of seed storage reserves and regulates the abundance and activities of several proteases following seed germination (PubMed:29168982).

3702:AT1G32990
gene id: 3702:AT1G32990
uniprot id: A0A178WDS8
uniprot id: Q9MAP3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex (By similarity).
messages: chloroplast

3702:AT3G44770
gene id: 3702:AT3G44770
uniprot id: Q5BPP4
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.

3702:AT3G55620
gene id: 3702:AT3G55620
uniprot id: A0A178VEN3
uniprot id: Q9M060
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-6 family.
messages: Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
messages: Cytoplasm
messages: Expressed at very low levels only.
messages: Monomer. Associates with the 60S ribosomal subunit.
messages: nucleolus

3702:AT1G30825
gene id: 3702:AT1G30825
uniprot id: A0A178WAY2
uniprot id: Q8LGI3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARPC2 family.
messages: Cell projection
messages: Component of the Arp2/3 complex composed of ARP2, ARP3, ARPC1/p41-ARC, ARPC2/p34-ARC, ARPC3/p21-ARC, ARPC4/p20-ARC and ARPC5/p16-ARC. Interacts with ARPC4.
messages: Component of the Arp2/3 complex.
messages: Distorted trichomes.
messages: Expressed at low levels in all tissues with a relatively highest expression in inflorescences.
messages: Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
messages: Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (By similarity). Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
messages: cytoskeleton

3702:AT2G45700
gene id: 3702:AT2G45700
uniprot id: A0A654F290
uniprot id: O64649
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G24900
gene id: 3702:AT3G24900
uniprot id: A0A1I9LR86
uniprot id: F4J7T6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT2G39910
gene id: 3702:AT2G39910
uniprot id: A0A178VWB2
uniprot id: Q8GXP4
names: Caution
messages: It is uncertain whether Met-1 or Met-13 is the initiator.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G21850
gene id: 3702:AT1G21850
uniprot id: A0A178W9U5
uniprot id: Q9SFF2
names: Similarity
messages: Belongs to the multicopper oxidase family.

3702:AT1G09690
gene id: 3702:AT1G09690
uniprot id: A0A178WPH9
uniprot id: Q43291
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL21 family.

3702:AT1G06310
gene id: 3702:AT1G06310
uniprot id: A0A654E9A3
uniprot id: Q9LMI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acyl-CoA oxidase family.
messages: Catalyzes the desaturation of acyl-CoAs to 2-trans-enoyl-CoAs.
messages: Peroxisome

3702:AT1G72640
gene id: 3702:AT1G72640
uniprot id: A0A178WM69
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G14980
gene id: 3702:AT3G14980
uniprot id: F4IXE7
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: DNA hypermethylation.
messages: Expressed in cotyledons and hypocotyls in young seedlings.
messages: Histone H3 acetyltransferase that binds methylated DNA at chromatin sites lacking histone H3K4 di- or trimethylation and catalyzes H3K18 and H3K23 acetylation (PubMed:22733760, PubMed:22700931). Prevents the transcriptional silencing of transgenes and of some endogenous genes (PubMed:22733760, PubMed:22700931). Requires the presence of IDM2 for efficient H3K18 acetylation, but not for H3K23 acetylation (PubMed:25002145).
messages: Interacts (via N-terminus) with IDM2 (PubMed:25002145, PubMed:24920332, PubMed:25684209). Interacts with IMD3 (PubMed:25684209). Part of a complex made of MBD7, IDM1, IDM2 and IDM3 (PubMed:25684209).
messages: Nucleus
messages: The PHD finger domain specifically binds the N-terminal tail of histone H3 and this binding is inhibited by H3K4 di- or trimethylation (PubMed:22700931). No effect of H3K9 methylation on the binding (PubMed:22700931). The N-terminal domain (1-592) is required for interactions with IDM2 (PubMed:24920332).

3702:AT1G51120
gene id: 3702:AT1G51120
uniprot id: Q9C688
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. RAV subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G24200
gene id: 3702:AT3G24200
uniprot id: A0A384KH43
uniprot id: A0A384LJ55
uniprot id: F4J6I5
uniprot id: F4J6I6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UbiH/COQ6 family.
messages: Component of a multi-subunit COQ enzyme complex.
messages: FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
messages: Mitochondrion inner membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G62540
gene id: 3702:AT1G62540
uniprot id: A0A1P8AP83
uniprot id: A0A1P8APF2
uniprot id: Q94K43
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the FMO family.
messages: Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.
messages: Increased accumulation of methylthiobutyl, -pentyl, -heptyl and -octyl glucosinolates in leaves and seeds.

3702:AT1G62940
gene id: 3702:AT1G62940
uniprot id: Q9LQ12
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Both substrate-binding domains (SBD1 and SBD2) are involved in the substrate recognition, and are sufficient to confer the substrate specificity.
messages: Carboxylate--CoA ligase that may use 4-coumarate as substrate. Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioester.
messages: Endoplasmic reticulum
messages: Interacts with TKPR1, PKSA and PKSB.
messages: Mostly confined to anther tapetal cells.

3702:AT2G41310
gene id: 3702:AT2G41310
uniprot id: O80365
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARR family. Type-A subfamily.
messages: Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling.
messages: Nucleus
messages: Predominantly expressed in roots.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT1G63030
gene id: 3702:AT1G63030
uniprot id: Q9SGJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold or dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation.

3702:AT1G01510
gene id: 3702:AT1G01510
uniprot id: O23702
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. Plant AN subfamily.
messages: Cofactor binding induces a conformational change.
messages: Cytoplasm
messages: Dwarfism. Impaired cortical microtubules (MTs) arrangement leading to abnormal cell shapes (reduced complexity), and narrow but thick leaves, characterized by cells small in the leaf-width direction and large in the leaf-thickness direction; this phenotype is also slightly observed in floral organs. Reduced trichome branching. Twisted siliques and reduced seed productivity. Delayed flowering and senescence, but increased tolerance to drought and pathogen attack. No impact on polarized localization of SOKs proteins in root cells (PubMed:32004461).
messages: Expressed in cotyledons, leaves, roots, stems and floral buds.
messages: Homodimer (PubMed:21801251). Interacts with KCBP and SUB (via intra-cellular domain); AN is not required for the correct subcellular localization and recycling of SUB (PubMed:23368817, PubMed:11889034). Binds to SOKs proteins polymers (e.g. SOK1, SOK2, SOK3 and SOK4) (PubMed:32004461).
messages: Involved in controlling the equilibrium between tubular and stacked structures in the Golgi complex (By similarity). Required for cortical microtubules (MTs) arrangement that confers cell shape. Regulates the width of leaves by controlling the polar elongation of leaf cells. Involved in the regulation of trichome branching. Seems to not be able to regulate gene transcription. Regulates epidermal cell divisions and elongation in a non-cell-autonomous manner (regulated by subepidermal cells), but regulates epidermal cell polarity, shape, trichome branching and elongation in a cell-autonomous manner. Negatively regulates growth in the petiole elongation. Prevents lipid peroxidation as a result of abiotic stress response. Is involved in the SUB-dependent signaling mechanism and may act in a membrane trafficking event around the trans-Golgi network.
messages: The C-terminal region (631-636) is indispenasble for homodimerization.
messages: Was initially thought to function as a transcriptional corepressor.
messages: trans-Golgi network

3702:AT1G34370
gene id: 3702:AT1G34370
uniprot id: Q9C8N5
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By shock H(+) and Al(3+) treatments.
messages: Expressed in roots (e.g. root tips and lateral roots), leaves, flowers (e.g. stigma, sepal, anther, and filament), stems, siliques and cotyledons.
messages: Hypersensitive to H(+) and Al(3+) rhizotoxicity, reduced induction of genes such as ALMT1 and MATE in response to acidic stress, and impaired Al-activated citrate exudation.
messages: Nucleus
messages: Probable transcription factor. Together with STOP2, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

3702:AT2G41820
gene id: 3702:AT2G41820
uniprot id: O22938
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Tyr protein kinase family.
messages: Cell membrane
messages: Expressed in the vascular strands of cotyledons, the shoot apex, hypocotyls, roots, leaves, stems and flowers.
messages: Leucine-rich repeat receptor-like protein kinase that may play a role in vascular tissues development.

3702:AT1G55310
gene id: 3702:AT1G55310
uniprot id: Q9SEU4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the splicing factor SR family. SCL subfamily.
messages: Component of the spliceosome. Homodimer. Interacts with AFC2, CYP59, RS2Z33, RNU1 and SR45. The interaction with AFC2 depends on phosphorylation status.
messages: Cytoplasm
messages: Involved in intron recognition and spliceosome assembly. Binds to multiple 5'-GAAG-3' repeats found in its third intron, suggesting autoregulation of alternative splicing (PubMed:22913769). May be necessary for accurate splicing of the 3' region of introns.
messages: Near the primary root tip, expressed in the vascular bundle, endodermis, cortex, epidermis, and lateral root cap. In leaves, present in guard cells leaf epidermal pavement cells and trichomes. In flowers, high expression in the pollen grains, mostly in vegetative nuclei. Also present in sepals, petals, and young siliques. After flowering, the expression level decreases gradually.
messages: No effect on alternative splicing, due to the redundancy with SCL30A. Scl33 and scl30a double mutant shows altered splicing.
messages: Nucleus speckle
messages: Phosphorylated by AFC2.
messages: The splicing pattern of the pre-mRNA is regulated in a tissue-specific manner and by development, and changes in response to various types of abiotic stresses and hormones.
messages: Ubiquitous. Mostly expressed in roots, fruits and flowers, and, to a lower extent, in leaves.
messages: nucleoplasm

3702:AT3G09260
gene id: 3702:AT3G09260
uniprot id: A0A178VCN3
uniprot id: Q9SR37
names: Activity Regulation
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by tissue damage and upon binding to PBP1 or PBP2.
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Beta-D-glucosidase active on scopolin > esculin >> 4-MU-glucoside >> DIMBOA-glucoside. No activity with pNP-glucoside, oNP-glucoside and sinigrin as substrates. May possess beta-D-fucosidase activity. Required for the beneficial interaction with the endophytic fungus P.indica. May participate in the control of root colonization by P.indica by repressing defense responses and modulating other responses required for a mutualistic interaction.
messages: Endoplasmic reticulum lumen
messages: Expressed exclusively in roots.
messages: Forms interchain disulfide bonds.
messages: Homodimers. Binds to the deubiquitinating enzyme AMSH3. The inactive form interacts with PBP1/JAL30 to form the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.
messages: Up-regulated by wounding, 2,4-D and methyl jasmonate (MeJA). Down-regulated by salt and mannitol.

3702:AT2G21950
gene id: 3702:AT2G21950
uniprot id: Q9SJ04
names: Subunit
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1.

3702:AT3G01720
gene id: 3702:AT3G01720
uniprot id: Q8VYF9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Glycosyltransferase involved in the O-galactosylation of several proteins including extensins. Catalyzes the transfer of alpha-galactosyl to Ser residues. Hydroxylation of proline residues adjacent to the serine acceptor is required for activity.
messages: Reduced root hair length (PubMed:25944827). Longer roots and larger leaves (PubMed:24914209).

3702:AT1G47485
gene id: 3702:AT1G47485
uniprot id: A0A178W7S7
uniprot id: Q8L8Y3
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the C-terminally encoded plant signaling peptide (CEP) family.
messages: Extracellular signaling peptide that represses, in a dose-dependent manner, primary root growth rate and lateral root elongation by inhibiting both cell division in meristems and cell growth in elongation zones. Prevents also slightly growth of above-ground parts (PubMed:18315543). Regulates systemic nitrogen (N)-demand signaling. Mediates systemic up-regulation of genes involved in N uptake and assimilation pathways (e.g. NRT1.1, NRT2.1 and NRT3.1) (PubMed:25324386).
messages: In young seedlings, only observed in lateral root primordia, first in the core region at stage VI, in which cells of outer layer 2 undergo a periclinal division, creating a new internal layer (PubMed:18315543, PubMed:24179095). Maximum levels are reached at the emergence stage, and steeply decrease after elongation of lateral roots, except for residual expression in the region of vascular connection. In two weeks old seedlings, also present in the shoot apical mersitem (SAM) (PubMed:18315543). Accumulates during flower development and during lateral root development. In flowers, present in the gynoecium (PubMed:24179095). Repressed upon floral induction (PubMed:14573523).
messages: Induced by auxin and nitrogen (N) (PubMed:24179095). Induced in shoots in response to nitrogen and nitrate starvation (PubMed:24179096, PubMed:25324386). Accumulates also under osmotic stress (e.g. mannitol and NaCl) (PubMed:24179096).
messages: Interacts with the CEP receptors CEPR1 and CEPR2.
messages: Mainly expressed in the lateral root primordia (PubMed:18315543). Also present in the shoot apical meristem (SAM) (PubMed:18315543, PubMed:24179095). Detected in the primary root apical meristem, at the root-hypocotyl junction, roots, leaves (in the small dentations at the leaf margin), siliques and flowers (PubMed:24179095).
messages: The mature small signaling peptide is generated by proteolytic processing of the longer precursor.
messages: apoplast

3702:AT1G53580
gene id: 3702:AT1G53580
uniprot id: Q9C8L4
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Embryonic lethality at the early heart stage, due to defects in endosperm development.
messages: Homodimer.
messages: Mitochondrion
messages: Sulfur dioxygenase that plays an essential role in hydrogen sulfide catabolism in the mitochondrial matrix. Hydrogen sulfide (H(2)S) gives rise to cysteine persulfide residues. ETHE1 consumes molecular oxygen to catalyze the oxidation of the persulfide, once it has been transferred to a thiophilic acceptor, such as glutathione (R-SSH). Plays an important role in metabolic homeostasis in mitochondria by metabolizing hydrogen sulfide and preventing the accumulation of supraphysiological H(2)S levels that have toxic effects, due to the inhibition of cytochrome c oxidase. Required for normal endosperm development in seed, and thereby also required for normal embryo development.
messages: Was initially thought to be a glyoxalase II isozyme (PubMed:9349270), but has been shown to lack glyoxalase activity (PubMed:22786886).

3702:AT4G38630
gene id: 3702:AT4G38630
uniprot id: A0A178V4I4
uniprot id: P55034
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the proteasome subunit S5A family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively. Interacts with PI4KG4. Interacts with RAD23s and DSK2s via its UIM3 and UIM1 motif, respectively. Interacts with 'Lys-48'-linked polyubiquitin chains via its UIM1 motif.
messages: Displays reduced seed germination, growth rate, stamen number, genetic transmission through the male gamete, hormone-induced cell division and increased oxidative stress tolerance. Is also more sensitive to abscisic acid (ABA), salt, sucrose stress, heat shock and DNA-damaging agents and shows a decreased sensitivity to cytokinin and auxin. In flowers, epidermal cells in petals were larger than those in the wild type.
messages: Phosphorylated by PI4KG4 in vitro.
messages: Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a potential docking subunit for both ubiquitin receptors RAD23s and DSK2s. Plays a role in the growth and development via the proteasome-dependent degradation of the ABA-signaling protein ABI5/DPBF1. Plays an important role for balancing cell expansion with cell proliferation rates during shoot development.
messages: Ubiquitous with highest expression in flowers.

3702:AT3G54950
gene id: 3702:AT3G54950
uniprot id: Q9SV43
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the patatin family.
messages: By the fungal pathogen B.cinerea and an avirulent strain of P.syringae pv tomato.
messages: Cell membrane
messages: Highly expressed in roots and at lower levels in leaves, stems, flowers and siliques.
messages: Increased length of leaves, petioles, hypocotyls, primary roots and root hairs. Changes in lipid levels and composition.
messages: Lacks the conserved Asp residue expected to act as the active site proton acceptor.
messages: Plants over-expressing PLP7 have decreased cellulose content and mechanical strength.
messages: Possesses non-specific lipolytic acyl hydrolase (LAH) activity. Catalyzes the hydrolysis of the galactolipids monogalactosyldiacylglycerol (MGDG) and digalactosyldiacylglycerol (DGDG), and the phoshpolipids phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), phosphatidic acid (PA), phosphatidylserine (PS). Favors the release of fatty acid at the sn-2 position for PC. Possesses acyl-CoA thioesterase activity. Negatively affects disease resistance to the necrotic fungal pathogen Botrytis cinerea and the avirulent bacteria Pseudomonas syringae by promoting cell death and reducing the efficiency of the hypersensitive response, respectively. However, PLP2 contributes to resistance to cucumber mosaic virus (CMV), an obligate parasite inducing hypersensitive response. May negatively regulate oxylipin production, possibly via participating in membrane repair that includes removal of oxidatively modified lipids. Enzymatic products of PLP2 may influence cellulose content and cell elongation.
messages: The nitrogen atoms of the two glycine residues in the GGXR motif define the oxyanion hole, and stabilize the oxyanion that forms during the nucleophilic attack by the catalytic serine during substrate cleavage.

3702:AT3G52340
gene id: 3702:AT3G52340
uniprot id: A0A178VKB2
uniprot id: A0A1I9LQG1
uniprot id: A0A1I9LQG4
uniprot id: Q93XN8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the sucrose phosphatase family.
messages: Catalyzes the final step of sucrose synthesis.
messages: Homodimer.

3702:AT5G15200
gene id: 3702:AT5G15200
uniprot id: A0A178UUQ0
uniprot id: B3H7J6
uniprot id: Q9LXG1
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: Binds to the translation initiation factors TIF3E1.

3702:AT1G43090
gene id: 3702:AT1G43090
uniprot id: Q9C8C3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT2G23980
gene id: 3702:AT2G23980
uniprot id: A0A1P8AYC4
uniprot id: A0A1P8AYI8
uniprot id: A0A654EWQ3
uniprot id: O82226
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Membrane
messages: Probable cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT1G11850
gene id: 3702:AT1G11850
uniprot id: A0A178WMU6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G63550
gene id: 3702:AT1G63550
uniprot id: Q5Q0E2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT2G42930
gene id: 3702:AT2G42930
uniprot id: A0A178VWQ5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G16580
gene id: 3702:AT5G16580
uniprot id: Q9FMD8
names: Caution
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Could be the product of a pseudogene.

3702:AT1G75490
gene id: 3702:AT1G75490
uniprot id: A0A178W9T8
uniprot id: Q9LQZ2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By high-salt stress.
messages: Nucleus
messages: Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity-inducible transcription.

3702:AT4G13940
gene id: 3702:AT4G13940
uniprot id: A0A178UZR5
uniprot id: A8MQP1
uniprot id: F4JTV4
uniprot id: F4JTV5
uniprot id: O23255
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the adenosylhomocysteinase family.
messages: Binds 1 NAD(+) per subunit.
messages: Embryo defective arrested at the globular stage (PubMed:15266054). Null mutations are homozygous lethal (PubMed:15266054).
messages: Essential protein during embryogenesis (PubMed:15266054). Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (PubMed:15659630). Required for DNA methylation-dependent gene silencing (PubMed:15659630).
messages: Homotetramer.

3702:AT1G18335
gene id: 3702:AT1G18335
uniprot id: A0A1P8ATB1
uniprot id: A0A5S9V0B9
uniprot id: F4IAQ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetyltransferase family. NAA40 subfamily.
messages: Cytoplasm
messages: Nucleus

3702:AT1G49560
gene id: 3702:AT1G49560
uniprot id: A0A178WF13
uniprot id: A0A1P8AUH8
uniprot id: Q9FX84
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor involved in phosphate signaling in roots.

3702:AT1G50640
gene id: 3702:AT1G50640
uniprot id: A0A7G2E011
uniprot id: C0SV01
uniprot id: O80339
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs.
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Contains a slightly degenerated ERF-associated amphiphilic repression (EAR) motif, which may be involved in the activity of transcriptional repression.
messages: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress.
messages: Interacts with SAP18.
messages: Nucleus

3702:AT4G29735
gene id: 3702:AT4G29735
uniprot id: A0A178V421
uniprot id: F4JNQ9
uniprot id: Q8LCF2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OST5 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT5G39990
gene id: 3702:AT5G39990
uniprot id: Q9FLD7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 14 family.
messages: Beta-glucuronosyltransferase involved in the biosynthesis of type II arabinogalactan (AG). Modifies both the beta-1,6-linked galactan and beta-1,3-linked galactan present in type II AG. Transfers glucuronate to beta-1,6-galactooligosaccharides with degrees of polymerization ranging from 3 to 11. Transfers glucuronate to beta-1,3-galactooligosaccharides with degrees of polymerization ranging from 5 to 7. The addition of glucuronate at the O6 position may terminate galactose chain extension. Required for cell elongation during seedling growth.
messages: Golgi apparatus membrane
messages: Increased cell elongation in hypocotyls and roots from seedlings grown in the dark.

3702:AT2G42440
gene id: 3702:AT2G42440
uniprot id: Q9SLB6
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: By auxin.
messages: Expressed in roots, stems, leaves and flowers.

3702:AT5G19490
gene id: 3702:AT5G19490
uniprot id: F4K162
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G10420
gene id: 3702:AT3G10420
uniprot id: F4J3R7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Albino seedlings with defects in etioplast and amyloplast development leading to degenerate organelle-like structures, but normal green vegetative tissues (PubMed:21045120). Reduced hypocotyl gravitropism probably due to the lack of amyloplasts (PubMed:21045120).
messages: Belongs to the ycf45 family.
messages: Required during eoplast (a highly reduced plastid type present during the degreening and dehydration stages of seed maturation) development in embryos and early stages of eoplast redifferentiation during seedling growth.
messages: chloroplast envelope
messages: chloroplast membrane

3702:AT5G37890
gene id: 3702:AT5G37890
uniprot id: A0A178UNQ6
uniprot id: Q9FKD7
names: Caution
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G27650
gene id: 3702:AT5G27650
uniprot id: F4K4D6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PDP family.
messages: Delayed flowering associated with reduced H3K27me3 level on FLC (PubMed:29314758). The triple mutant pdp1 pdp2 pdp3 has increased levels of FLC, MAF4 and MAF5 expression, but decreased expression of FT (PubMed:29314758).
messages: Interacts with MSI4/FVE (PubMed:29314758). Component of the PRC2 (polycomb repressive complex 2) complex which regulates histone methylation on histone H3K27 (By similarity).
messages: Nucleus
messages: Together with PDP2, PDP3 and PDP6, interacts with MSI4/FVE and MSI5 to suppress FLC, MAF4 and MAF5 expression by regulating the function of the PRC2 complex and modulating H3K27me3 level, thereby promoting flowering.

3702:AT2G32720
gene id: 3702:AT2G32720
uniprot id: A0A178VXM5
uniprot id: A0A1P8AX49
uniprot id: O48845
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome b5 family.
messages: Endoplasmic reticulum membrane
messages: Interacts with CER1, FAH1, FAH2 and BI-1.
messages: Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases, including fatty acid desaturases.

3702:AT3G07300
gene id: 3702:AT3G07300
uniprot id: A0A384L2N7
uniprot id: B3H7H1
uniprot id: Q9SFW0
names: Similarity
messages: Belongs to the eIF-2B alpha/beta/delta subunits family.

3702:AT4G23290
gene id: 3702:AT4G23290
uniprot id: Q3E9X6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT1G30820
gene id: 3702:AT1G30820
uniprot id: A0A178WJZ2
uniprot id: F4I6G9
names: Function
names: Similarity
messages: Belongs to the CTP synthase family.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.

3702:AT1G60110
gene id: 3702:AT1G60110
uniprot id: A0A1P8AP29
uniprot id: A0A1P8AP51
uniprot id: O80736
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT4G35590
gene id: 3702:AT4G35590
uniprot id: A0A1P8B478
uniprot id: O81791
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Putative transcription factor.

3702:AT1G05410
gene id: 3702:AT1G05410
uniprot id: A0A654E769
uniprot id: B9DGV7
uniprot id: Q8VZE5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G67740
gene id: 3702:AT1G67740
uniprot id: O49347
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbY family.
messages: PSBY-1 and -2 are manganese-binding polypeptides with L-arginine metabolizing enzyme activity. They are a component of the core of photosystem II.
messages: The central hydrophobic segment does not form a membrane-spanning region but could serve as a targeting signal for processing of the precursor in the thylakoid membrane.
messages: chloroplast thylakoid membrane

3702:AT3G15170
gene id: 3702:AT3G15170
uniprot id: Q9FRV4
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By BRM, at the chromatin level, and conferring a very specific spatial expression pattern. Directly induced by ESR2 in response to cytokinins. Precise spatial regulation by post-transcriptional repression directed by the microRNA miR164.
messages: Expressed in inflorescence stems, rosette leaves, aerial parts of seedlings, flowers, floral buds and roots.
messages: First observed in young embryonic SAM. Later confined to the boundaries between cotyledon primordia and the SAM. In mature embryos, localized around first leaves primordia. Only weakly present in vegetative SAM. In inflorescence, observed at the boundaries between floral organ primordia. In callus, expressed during transition to shoot development, with a progressive restriction to specific areas corresponding to future shoot apex.
messages: Nucleus
messages: Overexpressing transgenic plants exhibit adventitious shoot apical meristems.
messages: The NAC domain includes a DNA-binding domain and a dimerization domain, and confers the specificity of the transactivated target genes.
messages: Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Seems to act as an inhibitor of cell division.

3702:AT5G16970
gene id: 3702:AT5G16970
uniprot id: A0A178U6Z5
uniprot id: Q39172
names: Activity Regulation
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NADP-dependent oxidoreductase L4BD family.
messages: Cytoplasm
messages: Expressed in leaves.
messages: Homodimer.
messages: Inhibited by N-ethylmaleimide and p-chloromercuribenzoic acid.
messages: Involved in the detoxification of reactive carbonyls (PubMed:10848984, PubMed:12514241, PubMed:16299173). Acts on lipid peroxide-derived reactive aldehydes (PubMed:12514241). Specific to a double bond activated by an adjacent carbonyl group (PubMed:12514241). Can use both quinones and diamide as substrates, but not menadione, ferricyanide or phylloquinone (PubMed:10848984). Can use 4-hydroxy-(2E)-nonenal (HNE), 4-hydroxy-(2E)-hexenal (HHE), (2E)-nonenal, (2E)-hexenal, (2E)-pentenal, propenal (acrolein), 3-buten-2-one and 3-penten-2-one, but not (R)-(-)-carvone, n-nonanal, n-hexanal, (3Z)-hexanal, cyclohex-2-en-1-one or 12-oxo phytodienoic acid (OPDA) as electron acceptors (PubMed:12514241). Catalyzes the reduction of the alpha,beta-unsaturated bond of 2-alkenals, of lipid peroxide-derived oxenes 9-oxo-10(E),12(Z)-octadecadienoic acid (9-KODE) and 13-oxo-9(Z),11(E)-octadecadienoic acid (13-KODE), as well as 4-oxo-(2E)-nonenal and 4-hydroxynonenal (PubMed:16299173). Can use 12-oxo-10(E) dodecanoate (traumatin), trans-1,3 diphenyl-2-propenone, trans-1,4-diphenyl-2-butene-1,4-dione, 9-oxo-12,13-epoxy-(10E)-octadecenoic acid (trans-EKODE-1b) and 9,13-dihydroxy-10-oxo-11-octadecenoic acid as substrates (PubMed:26678323). Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro) (PubMed:17028190). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (PubMed:17028190). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis (PubMed:17028190).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated upon treatment with paraquat, t-butylhydroperoxide, diamide, and menadione.
messages: nucleoplasm

3702:AT3G46460
gene id: 3702:AT3G46460
uniprot id: A0A178V960
uniprot id: A0A1I9LLI9
uniprot id: Q42541
names: Caution
names: Function
names: Induction
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Involved in the formation of multiubiquitin chains. Signal the protein for selective degradation.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: This protein has been named UBC13 according to the nomenclature proposed in PubMed:16339806, but it is not the same as the UBC13 described in several publications that correspond to the protein named UBC35 in our nomenclature.
messages: Up-regulated by syringolin, a cell death-inducing chemical.

3702:AT2G06850
gene id: 3702:AT2G06850
uniprot id: A0A178VUP5
uniprot id: A0A1P8B288
uniprot id: Q39099
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: By auxin and brassinolide.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: N-glycosylated; not essential for its enzymatic activity.
messages: Predominantly expressed in young developing tissues. Expressed in 7 day old seedlings, roots, nodes bearing flowers, flower buds and siliques.
messages: apoplast
messages: cell wall

3702:AT1G33230
gene id: 3702:AT1G33230
uniprot id: A0A178WLH1
uniprot id: A0A1P8ANQ6
uniprot id: A0A654EG67
uniprot id: Q93ZW4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM120 family.
messages: Membrane

3702:AT5G19670
gene id: 3702:AT5G19670
uniprot id: A0A654G2L2
uniprot id: F4K2K9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT4G00416
gene id: 3702:AT4G00416
uniprot id: Q4PSK1
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcriptional regulator.
messages: The methyl-CpG-binding domain (MBD) functions both in binding to methylated DNA and in protein interactions.

3702:AT4G15890
gene id: 3702:AT4G15890
uniprot id: A0A1P8B7R3
uniprot id: O24610
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Chromosome
messages: Component of the condensin-2 complex.
messages: Dwarf plants with small rosette leaves (PubMed:25065716). Reduced pollen fertility and seed set (PubMed:23929493, PubMed:27385818). Lower chromatin density and frequent (peri)centromere association in interphase nuclei as well as impaired sister chromatid cohesion (PubMed:23929493). Altered interphase chromatin architecture in differentiated nuclei (PubMed:23929493). Defect chromosome condensation in male meiocytes and in centromeres orientation (PubMed:27385818). During meiosis, extensive interchromosome connections at metaphase I as well as a slight reduction in crossover formation (PubMed:25065716).
messages: Mostly expressed at bolting, flowering and during seed formation.
messages: Nucleus
messages: Present in buds.
messages: Regulated in a cell cycle-dependent manner with an increase during G2 phase, highest levels in the middle of G2 and a drop during mitosis (PubMed:23929493). Induced by MMD1 (PubMed:27385818).
messages: Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis (By similarity). May promote the resolution of double-strand DNA catenanes (intertwines) between sister chromatids (By similarity). Required for plant vigor, fertility, chromatin condensation and sister chromatid cohesion both during mitosis and meiosis (PubMed:23929493, PubMed:27385818). Necessary to maintain normal structural integrity of the meiotic chromosomes during the two nuclear divisions of gametogenesis, especially to prevent interchromosome connections at metaphase I (PubMed:25065716). Seems also involved in crossover formation during meiotic prophase I (PubMed:25065716). Prevents centromeric and pericentromeric heterochromatin repeats association (PubMed:23929493).

3702:AT2G24670
gene id: 3702:AT2G24670
uniprot id: Q9SJ98
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G23000
gene id: 3702:AT5G23000
uniprot id: Q9FG68
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in an adaxial ball-shaped set of cells in three to five cell layers around the L3 layer of the shoot apical meristem (SAM) in youg plantlets. Later, expressed transiently at the center of the boundary between the SAM and developing leaf primordia. In the inflorescence meristem, confined to the axils of flower primordia.
messages: By a shift from short days to long days, in the axils of primordia on the elongating stem.
messages: Mostly expressed in roots. Also present in shoot tips and flower buds.
messages: Nucleus
messages: Transcription activator of genes involved in the regulation of meristematic competence, such as CUC2. Positively regulates axillary meristems (AMs) formation and development, especially at early phases of vegetative growth, probably by specifying a stem cell niche for AM formation. Modulates the negative regulation mediated by gibberellic acid on the timing of developmental phase transitions.

3702:AT4G36920
gene id: 3702:AT4G36920
uniprot id: A0A5S9XZB0
uniprot id: P47927
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: It is detectable at low levels throughout the shoot apex and at enhanced levels in the inflorescence meristem, young floral buds and throughout the early stages of flower development and organogenesis. During floral organ differentiation it becomes spatially restricted to specific organ, tissue and cell types within the flower.
messages: May form homodimer. Interacts with HDA19 and with TPL in an EAR-motif dependent manner (PubMed:23034631).
messages: Mutations in the APETALA2 gene result in the ectopic expression of AGAMOUS, leading to the replacement of sepals by carpels and stamens and of petals by stamens.
messages: Negatively regulated by the C class floral homeotic protein AGAMOUS in stamens and carpels. MicroRNA 172 (miRNA172) negatively regulates APETALA2 at the translational level and may modulate its expression pattern. Seems not to be influenced by jasmonate and Alternaria brassicicola.
messages: Nucleus
messages: Probable transcriptional activator that promotes early floral meristem identity (PubMed:7919989). Is required subsequently for the transition of an inflorescence meristem into a floral meristem (PubMed:1675158). Plays a central role in the specification of floral identity, particularly for the normal development of sepals and petals in the wild-type flower, by spatially controlling the expression domains of multiple floral organ identity genes (PubMed:1675158, PubMed:23034631). Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in association with other repressors like LEUNIG and SEUSS (PubMed:1675158). Directly represses AGAMOUS by recruiting the transcriptional corepressor TOPLESS and the histone deacetylase HDA19 (PubMed:23034631). It is also required during seed development (PubMed:1675158).
messages: Sepals, petals, stamens, carpels, developing ovules, inflorescence stem, leaf and stem.

3702:AT4G08670
gene id: 3702:AT4G08670
uniprot id: A0A654FMF2
uniprot id: Q2PE70
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Confined to the anthers and stamen of the inflorescence, especially in pollen.
messages: In the anthers, specifically expressed in pollen, with levels varying during the different developmental stages.
messages: Lipid transfer protein involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition.
messages: Membrane
messages: Some early aborted shrunken and deformed seeds, with abnormal hair-like outgrowths, and infertile ovules, and increased salt permeability in seeds associated with an increase in unsubstituted fatty acids but a decrease in omega-hydroxy fatty acids in seed coats.

3702:AT5G49360
gene id: 3702:AT5G49360
uniprot id: Q9FGY1
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 3 family.
messages: By sugar starvation.
messages: Delayed seeds germination resulting from an altered mucilage composition. No visible growth defects; probably due to partial redundancy with BXL2. Bxl1 and bxl2 double mutants have shortened siliques and curled leaf edges.
messages: Expressed in leaves, stems, seedlings, roots, inflorescences, siliques and developing seeds. Expressed in the vasculature of the roots, leaves, flowers and silique. Expressed in tissues undergoing secondary cell wall thickening such as protoxylem, metaxylem, intrafascicular cambium and fibers.
messages: Involved in pectic arabinan modification in mucilage secretory cells. Acts also as a beta-D-xylosidase during the remodeling of xylans in vascular development.
messages: Might be processed at the C-terminus.
messages: extracellular matrix

3702:AT1G66250
gene id: 3702:AT1G66250
uniprot id: Q9C7U5
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: Cell membrane
messages: Contains two additional disulfide bonds.

3702:AT4G17580
gene id: 3702:AT4G17580
uniprot id: F4JP81
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

3702:AT3G59700
gene id: 3702:AT3G59700
uniprot id: Q96285
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Autophosphorylated on a Ser residue.
messages: Cell membrane
messages: Confers resistance to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici, but confers susceptibility to the pathogenic bacteria Pseudomonas syringae.
messages: Expressed at low levels in stems, leaves, flowers and siliques.
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici but enhanced resistance to the pathogenic bacteria Pseudomonas syringae.

3702:AT1G32370
gene id: 3702:AT1G32370
uniprot id: A0A178WN10
uniprot id: Q8H960
names: Caution
names: Disruption Phenotype
names: Function
messages: Necessary for the efficient intracellular multiplication of tobamoviruses.
messages: Reduced efficiency of intracellular multiplication of tobamoviruses (e.g. crucifer strain TMV-Cg).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G48980
gene id: 3702:AT3G48980
uniprot id: A0A384LPB6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G43880
gene id: 3702:AT2G43880
uniprot id: A0A178VZV0
uniprot id: A0A1P8AZC1
uniprot id: Q9SLM8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT1G18410
gene id: 3702:AT1G18410
uniprot id: A0A1P8AVA1
uniprot id: A0A1P8AVE6
uniprot id: A0A1P8AVE8
uniprot id: A0A2H1ZEB7
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

3702:AT1G07420
gene id: 3702:AT1G07420
uniprot id: A0A178WAJ4
uniprot id: Q8VWZ8
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Endoplasmic reticulum membrane
messages: Expressed in shoots, roots, siliques and flowers, and, slightly, in developing seeds.
messages: In shoots, restricted to the apical meristem (SAM) (PubMed:27006488). In roots, detected only in adventitious root primordia, lateral root primordia, and the root tip meristem (PubMed:27006488). In flowers, expressed in vascular tissues of sepals and petals as well as in stamen filaments and pollen (PubMed:27006488). In young siliques, confined to the style and silique funiculus (PubMed:27006488). In mature siliques, restricted to the abscission zone (PubMed:27006488). During embroygenesis, first expressed at very low levels in seeds at the early developmental stages; accumulates slightly in the late stages (PubMed:27006488).
messages: No obvious phenotype (PubMed:27006488). The smo2-1 smo2-2 double mutant accumulates the 4alpha-methylsterols 24-ethylidene lophenol and 24-ethyl lophenol, and is embryonic lethal, arrested in early stages with an altered endosperm development, probably due to disturbed auxin flux and responses (PubMed:27006488).
messages: Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the second methyl group at the C-4 position (PubMed:11707264). 24-ethylidenelophenol and 24-ethyllophenol are the preferred substrates (PubMed:11707264). Together with SMO2-1, required during embryogenesis, probably by maintaining sterols and auxin homeostasis (PubMed:27006488).
messages: Requires a membrane-bound cytochrome b5 as an obligatory electron carrier from NAD(P)H to SMO.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.

3702:AT5G07830
gene id: 3702:AT5G07830
uniprot id: A0A654FZP1
uniprot id: Q9FF10
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 79 family.
messages: Endoglycosidase which is a cell surface and extracellular matrix-degrading enzyme. Cleaves heparan sulfate proteoglycans (HSPGs) into heparan sulfate side chains and core proteoglycans (By similarity).
messages: Lysosome membrane
messages: Secreted

3702:AT2G22770
gene id: 3702:AT2G22770
uniprot id: A0A178VWP9
uniprot id: Q8S3F1
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus
messages: Transcription activator that regulates the expression of at least NAI2, PYK10 and PBP1. Required for and mediates the formation of endoplasmic reticulum bodies (ER bodies). Involved in the symbiotic interactions with the endophytes of the Sebacinaceae fungus family, such as Piriformospora indica and Sebacina.

3702:AT3G59650
gene id: 3702:AT3G59650
uniprot id: A0A384KLB8
uniprot id: F4J9E4
uniprot id: Q9M1A3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mL43 family.
messages: Mitochondrion

3702:AT4G38470
gene id: 3702:AT4G38470
uniprot id: F4JTP5
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Activated by autophosphorylation at Thr-443.
messages: Autophosphorylated on serine and threonine residues. Autophosphorylated at Thr-443.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Retarded growth.
messages: Serine/threonine protein kinase that specifically phosphorylates chloroplast precursor proteins in the cytosol within the cleavable presequences (transit peptides). May be part of a cytosolic regulatory network involved in chloroplast protein import. Does not phosphorylate mitochondrion precursor proteins. Specific for ATP and does not utilize other NTPs (PubMed:17090544, PubMed:16429265). Plays a role in chloroplast biogenesis and differentiation in cotyledons, possibly through phosphorylation of chloroplast preproteins (PubMed:21799034).
messages: cytosol

3702:AT1G21065
gene id: 3702:AT1G21065
uniprot id: Q9LPU1
names: Similarity
messages: Belongs to the UPF0047 family.

3702:AT5G04347
gene id: 3702:AT5G04347
uniprot id: A0A1P8B9Z0
uniprot id: Q1G3H7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G19045
gene id: 3702:AT2G19045
uniprot id: F4ISE2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT1G28050
gene id: 3702:AT1G28050
uniprot id: A0A5S9W5G0
uniprot id: Q9C7E8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Nucleus

3702:AT4G31120
gene id: 3702:AT4G31120
uniprot id: Q8GWT4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
messages: Circadian-regulation.
messages: Cytoplasm
messages: High levels from 5 to 20 days after germination (at protein level).
messages: Highly expressed in flowers, roots and siliques, lower expression in stems and mature leaves (at protein level). Abundant in shoot apex, young leaves and leaf primordia, floral and inflorescence meristems, gynoecium, stamens, sepals and young siliques, but not in older leaves, petals and vascular tissues.
messages: Methylates arginine residues of myelin basic protein (MBP) in vitro. Methylates symmetrically histone H4 of the FLC chromatin to form H4R3me2s, which in turn suppresses FLC expression to induce flowering. Regulates alternative splicing by methylating spliceosomal proteins. Involved in the post-transcriptional regulation of the circadian clock.
messages: Plants are late-flowering. Increased alternative splicing of several genes, including APRR9.

3702:AT5G53380
gene id: 3702:AT5G53380
uniprot id: Q9FK04
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Induced in roots during drought and salt stresses.
messages: Mostly expressed in roots.

3702:AT2G18193
gene id: 3702:AT2G18193
uniprot id: Q8GW96
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Membrane

3702:AT1G68630
gene id: 3702:AT1G68630
uniprot id: Q9SX26
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in heavy metals transport.
messages: Membrane

3702:AT2G43470
gene id: 3702:AT2G43470
uniprot id: A0A178VVY9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G11945
gene id: 3702:AT3G11945
uniprot id: A0A178VMS7
uniprot id: F4J8K0
uniprot id: Q1ACB3
names: Activity Regulation
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family.
messages: Inhibited by haloxydine (3,5-dichloro-2,6-difluoro-4-haloxypyridine).
messages: Involved in the synthesis of plastoquinone-9. Can use both homogentisic acid and 2,5-dihydroxyphenylacetic acid gamma-lactone as prenyl acceptors, and solanesyl diphosphate > farnesyl diphosphate > geranylgeranyl diphosphate >> phytyl diphosphate as prenyl donors. Do not catalyze the decardoxylation of homogentisate uncoupled from prenylation.
messages: Seeds overexpressing HST accumulate increased levels of tocopherol.
messages: Was initially thought to have a homogentisate phytyltransferase activity and to be involved in tocopherol biosynthesis.
messages: chloroplast membrane

3702:AT2G45620
gene id: 3702:AT2G45620
uniprot id: O64642
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-B-like family.
messages: Completely inhibited by 2'-O-methylation on the substrate RNA.
messages: Cytoplasm
messages: Interacts with AGO1.
messages: P-body
messages: UTP:RNA uridylyltransferase with a marked preference for uridine polymerization and a distributive activity for the first added nucleotides (PubMed:23748567, PubMed:25928405). Uridylates oligo(A)-tailed mRNAs to prevent 3' to 5' ribonucleotytic attacks (PubMed:23748567). Reduces the accumulation of oligo(A)-tailed mRNAs (PubMed:33637717). Prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis (PubMed:26972004, PubMed:33637717). Uridylation repairs deadenylated extremities to restore the size distribution observed for non-uridylated oligo(A) tails (PubMed:26972004). Can prevent the 3' trimming of mRNAs still engaged on polysomes (PubMed:23748567). Acts synergistically with HESO1 in unmethylated miRNA uridylation, leading to their degradation (PubMed:25928341). URT1 and HESO1 prefer substrates with different 3' end nucleotides and act cooperatively to tail different forms of the same miRNAs (PubMed:25928405). URT1 and HESO1 act sequentially, with URT1 mono-uridylating the miRNAs followed by their further uridylation by HESO1 (PubMed:25928405). URT1 and HESO1 are involved in the uridylation and clearance of RISC-generated 5' mRNA fragments (PubMed:30364210). Has no effect on uridylation of heterochromatic siRNAs (PubMed:25928341). Able to act on AGO1-bound miRNAs and the uridylated species stay associated with AGO1 (PubMed:25928405). Acts as post-transcriptional gene silencing (PTGS) suppressor (PubMed:31076735).

3702:AT4G38300
gene id: 3702:AT4G38300
uniprot id: Q9SVF5
names: Similarity
messages: Belongs to the glycosyl hydrolase 10 (cellulase F) family.

3702:ArthCp080
gene id: 3702:ArthCp080
uniprot id: A0A1B1W502
uniprot id: P56753
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I 49 kDa subunit family.
messages: Folded specifically by a chaperonin Cpn60 complex containing at least 1 Cpn60 beta 4 subunit.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus (By similarity). Interacts with the chaperonin CNP60B4 subunit.
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3702:AT3G20090
gene id: 3702:AT3G20090
uniprot id: A0A5S9XDY6
uniprot id: F4JDH8
uniprot id: Q9LJY9
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G12390
gene id: 3702:AT5G12390
uniprot id: A0A178U9A0
uniprot id: Q94CK3
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FIS1 family.
messages: Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
messages: Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. In association with PEX11C, PEX11D, PEX11E and DRP3A, is involved in cell cycle-associated constitutive self-replication of preexisting peroxisomes.
messages: Interacts with PEX11A, PEX11B, PEX11C, PEX11D and PEX11E.
messages: Membrane
messages: Mitochondrion outer membrane
messages: Peroxisome membrane
messages: Plants silencing FIS1B show reduced growth, increase in the size of mitochondria and decrease in the number of mitochondria per cell (PubMed:18785999). Overexpression of FIS1B increases the fission of peroxisomes and mitochondria (PubMed:19825601).
messages: The C-terminus is necessary for mitochondrial or peroxisomal targeting, while the N-terminus is necessary for mitochondrial or peroxisomal fission.

3702:AT5G48000
gene id: 3702:AT5G48000
uniprot id: A0A178U980
uniprot id: F4K051
uniprot id: Q8L7D5
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Constitutes with three contiguous genes an operon-like gene cluster that is involved in the thalianol pathway.
messages: Expressed primarily in the root epidermis.
messages: Hydroxylates thalianol into thalian-diol.
messages: Increased levels of thalianol in roots.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G34047
gene id: 3702:AT1G34047
uniprot id: Q2V2Q8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G43580
gene id: 3702:AT1G43580
uniprot id: Q9XIG2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sphingomyelin synthase family.
messages: Catalyzes the biosynthesis of sphingolipids with very long-chain fatty acid (VLCFA) (PubMed:31182845). Required for the formation of plasmodesmal cytoplasmic sleeve during the transition from type I to type II plasmodesmata to modulate post-sieve elements (SE) unloading and symplastic cell-to-cell molecular trafficking at the phloem pole pericycle (PPP)-endodermis interface in roots (PubMed:31182845).
messages: Enhanced plasmodesmata-mediated symplastic transport through the phloem pole pericycle (PPP)-endodermis interface due to a defect in the formation of the endoplasmic reticulum (ER)-plasma membrane tethers during plasmodesmal morphogenesis and associated with pores lacking cytoplasmic sleeve.
messages: Membrane

3702:AT1G73330
gene id: 3702:AT1G73330
uniprot id: Q39091
names: Function
names: Induction
names: Similarity
messages: Belongs to the protease inhibitor I3 (leguminous Kunitz-type inhibitor) family.
messages: Exhibits Kunitz trypsin protease inhibitor activity.
messages: Induced by infestation with spider mites (PubMed:30042779). Down-regulated in roots in response to drought stress (PubMed:7823904).

3702:AT4G22570
gene id: 3702:AT4G22570
uniprot id: A0A178V1I0
uniprot id: Q9SUW2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. May contribute to the recycling of adenine into adenylate nucleotides and the inactivation of cytokinins by phosphoribosylation. Possesses low activity toward adenine and cytokinins.
messages: Cytoplasm
messages: Homodimer.
messages: No visible phenotype under normal growth conditions.

3702:AT5G14470
gene id: 3702:AT5G14470
uniprot id: Q9LY82
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the GHMP kinase family.
messages: Magnesium. Can also use other divalent cations like manganese or cobalt.
messages: Sugar-1-kinase with a strict substrate specificity for D-glucuronic acid and ATP. Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in a salvage pathway for glucuronic acid (By similarity).

3702:AT3G53970
gene id: 3702:AT3G53970
uniprot id: A0A178VB57
uniprot id: A0A384KYJ5
uniprot id: F4JBP8
uniprot id: Q9M330
names: Caution
names: Function
names: Similarity
messages: Belongs to the proteasome inhibitor PI31 family.
messages: Could play an important role in control of proteasome function. Inhibits the hydrolysis of protein and peptide substrates by the 20S proteasome (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G72750
gene id: 3702:AT1G72750
uniprot id: A0A178W370
uniprot id: Q38820
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family.
messages: Component of the TIM23 complex, at least composed of TIM23, TIM17, TIM50 and TIM21.
messages: Essential component of the TIM17:23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. Links the inner and outer membranes (By similarity).
messages: Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
messages: Expressed in roots and young cotyledons. Detected in leaves and flowers.
messages: Homomultimer. Component of the TIM17:23 complex at least composed of TIM23, TIM17 and TIM50. The complex interacts with the TIM44 component of the PAM complex. Also part of the NADH-ubiquinone oxidoreductase complex I. Interacts with OEP163, TIM17-2, TIM21, TIM50 and MPPA2.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Peak of expression during cotyledon development.
messages: The C-terminal part (143-188) is required for insertion in the mitochondrial inner membrane.

3702:AT5G42655
gene id: 3702:AT5G42655
uniprot id: A0A1P8BDN2
uniprot id: A0A654G7C8
uniprot id: F4K313
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT5G37680
gene id: 3702:AT5G37680
uniprot id: A0A5S9Y8S8
uniprot id: Q8W4C8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Component of tomato mosaic virus (ToMV) RNA replication complexes. Required for tobamovirus multiplication, especially for efficient negative-strand RNA synthesis and viral RNA capping.
messages: Belongs to the small GTPase superfamily. Arf family.
messages: In the triple mutants arl8a-1 arl8b-1 arl8c-1, impaired multiplication of tomato mosaic virus (ToMV).
messages: Interacts with tubulin.
messages: Late endosome membrane
messages: Lysosome membrane
messages: May play a role in lysosome motility. May play a role in chromosome segregation.
messages: spindle

3702:AT5G17920
gene id: 3702:AT5G17920
uniprot id: A0A654G2F8
uniprot id: O50008
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the vitamin-B12 independent methionine synthase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation.
messages: Expressed in leaves, stems, flowers, siliques and seeds.
messages: cytosol

3702:AT5G19020
gene id: 3702:AT5G19020
uniprot id: P0C8Q8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT1G03850
gene id: 3702:AT1G03850
uniprot id: A0A178W2Q3
uniprot id: Q84TF4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G18820
gene id: 3702:AT4G18820
uniprot id: F4JRP0
names: Similarity
messages: Belongs to the DnaX/STICHEL family.

3702:AT2G26020
gene id: 3702:AT2G26020
uniprot id: A0A178VQC3
uniprot id: O80994
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Confers broad-spectrum resistance to pathogens.
messages: Secreted

3702:AT1G12750
gene id: 3702:AT1G12750
uniprot id: A0A1P8AUJ6
uniprot id: A0A2H1ZEB4
uniprot id: Q8VZ48
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Mitochondrion membrane
messages: Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis. Might be involved in response to abiotic stimuli.

3702:AT3G56760
gene id: 3702:AT3G56760
uniprot id: Q9LET1
names: Activity Regulation
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by calcium and calmodulin. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Binds calmodulin (CaM) in a calcium-dependent manner.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (391-421) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT5G55740
gene id: 3702:AT5G55740
uniprot id: Q9FM64
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Plays a major role in chloroplast RNA editing. Acts as a site-recognition transacting factor involved in the edition of the site 2 of ndhD (ndhD-2), which encodes a subunit of the NDH complex.
messages: chloroplast

3702:AT5G47650
gene id: 3702:AT5G47650
uniprot id: A0A1P8BEH7
uniprot id: A0A1P8BEL5
uniprot id: Q94B74
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: By paraquat, drought and high salinity.
messages: Expressed in roots, stems and leaves.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives, possibly using both NADH and ADP-ribose as substrates.
messages: Overexpression of NUTD2 confers enhanced tolerance to oxidative stress.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives. In vitro, it can use both NADH and ADP-ribose as substrates; however the relevance of such substrates in vivo is unclear. Confers tolerance to oxidative stress (PubMed:18798872).

3702:AT4G02730
gene id: 3702:AT4G02730
uniprot id: Q9SY00
names: Disruption Phenotype
names: Subunit
messages: No visible phenotype.
messages: Unlike WDR5A, does not interact with RBL or TRO.

3702:AT3G55000
gene id: 3702:AT3G55000
uniprot id: Q9FQ25
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Extreme defects in morphogenesis, positioning of mitotic division planes and cellular organization due to dysfunction of the cortical cytoskeleton and absence of the preprophase band of microtubules. In the ton1 insertional mutant, the two highly similar genes in tandem, TON1A and TON1B are simultaneously disrupted.
messages: Interacts with CEN1, LNG1/TRM2 and LNG2/TRM1 (via C-terminus).
messages: Involved in the control of the dynamic organization of the cortical cytoskeleton. May play a role in the organization of microtubule arrays at the centrosome through interaction with centrin 1 (CEN1).
messages: cytoskeleton

3702:AT5G66160
gene id: 3702:AT5G66160
uniprot id: F4JZ38
uniprot id: Q9M622
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Involved in the trafficking of vacuolar proteins. Functions probably as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) by binding the C-terminal vacuolar sorting determinant (VSD) of vacuolar-sorted proteins.
messages: Membrane
messages: Prevacuolar compartment membrane
messages: Protein storage vacuole membrane

3702:AT5G28235
gene id: 3702:AT5G28235
uniprot id: Q9S9L0
names: Similarity
messages: Belongs to the peptidase C48 family.

3702:AT4G08470
gene id: 3702:AT4G08470
uniprot id: A0A1P8B722
uniprot id: Q9M0T3
names: Disruption Phenotype
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
messages: Expressed at low levels in roots, stems, siliques, leaves, seedlings and flower buds.
messages: No visible phenotype under standard growth conditions.

3702:AT4G23730
gene id: 3702:AT4G23730
uniprot id: A0A178V3N2
uniprot id: A0A1P8B8W1
uniprot id: A0A1P8B8W5
uniprot id: Q9SUQ4
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

3702:AT1G07780
gene id: 3702:AT1G07780
uniprot id: A0A178WLS8
uniprot id: A0A1P8ATT5
uniprot id: A0A1P8ATU6
uniprot id: B3H4J9
uniprot id: Q42440
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TrpF family.
messages: Bushy morphology, reduced fertility, blue fluorescence under UV light and resistance to the anthranilate analog 6-methylanthranilate.
messages: By silver nitrate and UV irradiation.
messages: Catalyzes the conversion of 5-phosphoribosylanthranilate to l-(O-carboxyphenylamino)-l-deoxyribulose-5-phosphate, which is the third step of the tryptophan biosynthetic pathway.
messages: Expressed in roots and shoots.
messages: chloroplast

3702:AT1G13100
gene id: 3702:AT1G13100
uniprot id: A0A178W427
uniprot id: Q9SAE4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26310
gene id: 3702:AT3G26310
uniprot id: A0A654FAU5
uniprot id: Q0WVN2
uniprot id: Q9LIP5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT3G14990
gene id: 3702:AT3G14990
uniprot id: Q9FPF0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase C56 family.
messages: By high light, copper, hydrogen peroxide, methyl viologen and cis-jasmone, but not methyl jasmonate.
messages: Homodimer (Probable). Interacts with CSD1 and GPX2.
messages: Involved in oxidative stress response. Confers protection against diverse stresses by binding both CSD1 and GPX2 and mediating the cytosolic activation of the Cu-Zn-dependent superoxide dismutase activity of CSD1.
messages: No visible phenotype under normal growth conditions, but mutant plants have increased susceptibility to oxidative stress-induced cell death and accelerated cell death in aging plants.
messages: Nucleus
messages: cytosol

3702:AT1G11670
gene id: 3702:AT1G11670
uniprot id: A0A178WD87
uniprot id: Q9SAB0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT5G35360
gene id: 3702:AT5G35360
uniprot id: A0A178U9M2
uniprot id: F4JYE0
uniprot id: F4JYE1
uniprot id: O04983
names: Caution
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in fatty acids synthesizing tissues. Mostly expressed in siliques, developing leaves, and flowers, present in roots and embryos (especially at torpedo stage), and, to a lower extent, in mature leaves.
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and two subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD).
messages: Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
messages: chloroplast

3702:AT3G58200
gene id: 3702:AT3G58200
uniprot id: A0A178VL65
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G11510
gene id: 3702:AT5G11510
uniprot id: Q94FL9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells. Associates with CDKA-1, RBR1 and E2FB, but not with E2FC, in proliferating cells, at early stages of leaves development.
messages: Expressed in roots, cotyledons and leaves, especially in vascular tissues, and in flowers.
messages: Expressed in the root quiescent center (PubMed:15937229). Accumulates in division zone of primary root tips and emerging lateral roots. Also present in floral organs in young flower buds. Weakly and uniformly present in the developing embryo and maternal tissues (PubMed:17287251). Expressed specifically in proliferating stage of leaves (PubMed:26069325).
messages: In EDC plants, defects of cytokinesis (PubMed:25806785). The double mutant myb3r1 myb3r4 often fails to complete cytokinesis, resulting in multinucleate cells with gapped walls and cell wall stubs in diverse tissues (e.g. in embryo during the first or second division after fertilization, in stomata guard mother cell) and several pleiotropic developmental defects, and associated with the selective reduction of several G2/M phase-specific genes transcript levels (e.g. CYCB2, CDC20.1 and KNOLLE). Hypersensitivity to caffeine, an inhibitor of cytokinesis (PubMed:17287251, PubMed:21862669). Impaired powdery mildew (e.g. G.orontii)-induced endoreduplication. Reduced G.orontii growth and reproduction leading to an enhanced resistance to powdery mildew (PubMed:20018666).
messages: Involved in transcription regulation during induced endoreduplication at the powdery mildew (e.g. G.orontii) infection site, thus promoting G.orontii growth and reproduction.
messages: Nucleus
messages: Slightly induced by salicylic acid (SA) (PubMed:16463103). Expressed in a cell cycle-dependent manner, with highest levels 2 hours before the peak of mitotic index in cells synchronized by aphidicolin. Activated by CYCB1 (PubMed:17287251). Accumulates at powdery mildew (e.g. G.orontii) infected cells.
messages: Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (PubMed:21862669). Involved in the regulation of cytokinesis, probably via the activation of several G2/M phase-specific genes transcription (e.g. KNOLLE) (PubMed:17287251, PubMed:21862669, PubMed:25806785). Required for the maintenance of diploidy (PubMed:21862669).

3702:AT2G06925
gene id: 3702:AT2G06925
uniprot id: A0A178VVH8
uniprot id: A0A1P8B0P3
uniprot id: A0A7G2E8E6
uniprot id: Q8S8N6
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phospholipase A2 family.
messages: Binds 1 Ca(2+) ion per subunit.
messages: Cytoplasmic vesicle
messages: Golgi apparatus
messages: Induced 6 hours post pathogen infection in the area immediately neighboring the inoculated zone.
messages: Interacts with MYB30.
messages: Nucleus
messages: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Releases lysophospholipids (LPLs) and free fatty acids (FFAs) from membrane phospholipids in response to hormones and other external stimuli. Modulates the trafficking of PIN proteins to the plasma membrane (PubMed:16140037, PubMed:20525850). Negatively regulates MYB30 transcriptional activity and hypersensitive response control (PubMed:20696912).
messages: Secreted
messages: The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylethanolamine over phosphatidylcholine.
messages: Ubiquitous but expressed at a low level.

3702:AT5G38930
gene id: 3702:AT5G38930
uniprot id: A0A178U916
uniprot id: Q9FMA9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT1G68760
gene id: 3702:AT1G68760
uniprot id: A0A178WE57
uniprot id: Q9CA40
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Cytoplasm
messages: Expressed in roots, stems and leaves.
messages: Has the ability to complement a mutation of mutT in E.coli and thereby completely suppress the increased frequency of spontaneous mutations.
messages: Homodimer.
messages: Increased level of 8-oxo-G in genomic DNA.
messages: Magnesium may be the real cofactor in vivo.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives. Its substrate specificity is unclear. In vitro, it can use NTP, dNTP, 8-oxo-GTP, 8-oxo-dGTP, dGTP, dATP, dTTP or dihydroneopterin triphosphate (DHNTP) as substrate. Has some NADH pyrophosphatase activity in vitro; however, such activity may not be relevant in vivo due to the high concentration of manganese used during the experiments. Plays an important role in protection against oxidative DNA and RNA damage by removing oxidatively damaged form of guanine.
messages: Not induced by paraquat, salinity, high light and drought.

3702:AT3G50510
gene id: 3702:AT3G50510
uniprot id: Q9SCS4
names: Similarity
messages: Belongs to the LOB domain-containing protein family.

3702:AT3G18380
gene id: 3702:AT3G18380
uniprot id: A0A654F8E9
uniprot id: A0A7G2ELP9
uniprot id: Q8RWJ7
names: Domain
names: Function
names: Subcellular Location Annotation
messages: May play a role in the recruitment of Pol IV to genomic regions associated with K9 methylated histone H3 that are targets for RdDM.
messages: Nucleus
messages: The SAWADEE domain (154-257) binds to mono-, di-, or trimethylated H3K9 histone peptides, but this interaction is blocked if H3K4 methylation is present.

3702:AT5G63135
gene id: 3702:AT5G63135
uniprot id: A0A178UEH7
uniprot id: Q8LC33
names: Similarity
messages: Belongs to the APC15 family.

3702:AT2G45130
gene id: 3702:AT2G45130
uniprot id: Q5PP62
names: Function
names: Induction
messages: Plays a positive role in plant adaptation to phosphate starvation and exerts negative feedback regulation of SPX1.
messages: Up-regulated under phosphate starvation.

3702:AT5G54250
gene id: 3702:AT5G54250
uniprot id: Q94AS9
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as cyclic nucleotide-gated ion channel. Permeable to potassium and sodium in a cyclic nucleotide-dependent fashion (cAMP or cGMP). Might constitute a common downstream component of the signaling pathways leading to hypersensitive response (HR).
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: Induced by both ethylene and methyl jasmonate treatments, or after pathogen attack.
messages: Loss-of-function mutation results in the loss of the hypersensitive response leading to broad spectrum disease resistance, and displays a lesion-mimic phenotype.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT2G07681
gene id: 3702:AT2G07681
uniprot id: F4IMA2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CcmC/CycZ/HelC family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT3G43240
gene id: 3702:AT3G43240
uniprot id: Q6NQ79
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G60960
gene id: 3702:AT1G60960
uniprot id: A0A178WHL0
uniprot id: A0A1P8ARE2
uniprot id: A0A1P8ARJ0
uniprot id: Q8LE59
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZIP transporter (TC 2.A.5) family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May play a role in the transport of iron in the plastids.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast thylakoid membrane

3702:AT5G17810
gene id: 3702:AT5G17810
uniprot id: A0A178U995
uniprot id: A0A1P8BCH3
uniprot id: Q8GY25
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WUS homeobox family.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor which may be involved in developmental processes.

3702:AT1G23820
gene id: 3702:AT1G23820
uniprot id: A0A178W1L5
uniprot id: F4I7M5
uniprot id: Q9ZUB3
names: Similarity
names: Subunit
messages: Belongs to the spermidine/spermine synthase family.
messages: Homotetramer and heterodimer. Component of a multiprotein complex. Interacts with SPMS and SPDSYN2.

3702:AT3G59620
gene id: 3702:AT3G59620
uniprot id: Q9M1A6
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT3G50420
gene id: 3702:AT3G50420
uniprot id: Q9SCT2
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT5G28510
gene id: 3702:AT5G28510
uniprot id: Q9LKR7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Endoplasmic reticulum lumen

3702:AT2G35110
gene id: 3702:AT2G35110
uniprot id: A0A178W190
uniprot id: Q5S2C4
names: Caution
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the HEM-1/HEM-2 family.
messages: Binds PIR.
messages: Expressed in roots, root hairs, hypocotyls, cotyledons, stems, leaves, trichomes, and flowers.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G56220
gene id: 3702:AT1G56220
uniprot id: A0A178WNF8
uniprot id: A0A1P8ASR5
uniprot id: A0A2H1ZEE3
uniprot id: A0A2H1ZEE5
uniprot id: Q8LD26
names: Caution
names: Similarity
messages: Belongs to the DRM1/ARP family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G05350
gene id: 3702:AT1G05350
uniprot id: O23034
names: Function
names: Similarity
messages: Belongs to the ubiquitin-activating E1 family. UBA5 subfamily.
messages: E1-like enzyme which activates UFM1.

3702:AT5G14370
gene id: 3702:AT5G14370
uniprot id: A0A654G1L6
uniprot id: Q949T9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G47060
gene id: 3702:AT2G47060
uniprot id: A0A654F2N6
uniprot id: F4IK66
uniprot id: O80719
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT1G78850
gene id: 3702:AT1G78850
uniprot id: Q9ZVA4
names: Caution
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
messages: Identified as a cargo protein of vacuolar sorting receptors (PubMed:23738689). This was based on interactions with truncated vacuolar sorting receptors and their co-secretion in the culture medium (PubMed:23738689). This function is however not supported by recent evidences.
messages: May be involved in a cell-to cell programmed cell death (PCD) signaling mechanism.
messages: Phosphorylated on tyrosine.
messages: Up-regulated by fungal elicitor (PubMed:12833529). Up-regulated in both heat- and senescence-induced programmed cell death (PCD) (PubMed:15276441).
messages: cell wall

3702:AT4G00893
gene id: 3702:AT4G00893
uniprot id: A0A178UVY7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G15210
gene id: 3702:AT5G15210
uniprot id: Q9LXG0
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Homo- and heterodimer with other ZFHD proteins (By similarity). Interacts with MIF1, MIF2 and MIF3; these interactions prevent nuclear localization and DNA-binding to inhibit transcription regulation activity. Binds to ZHD1, ZHD2, ZHD4, ZHD10 and ZHD11. Interacts with HIPP30 (PubMed:18974936).
messages: Mostly expressed in flowers and inflorescence.
messages: Nucleus
messages: Putative transcription factor.
messages: The homeodomain differs form the typical one by having namely 4 instead of 3 extra amino acids inserted in the loop between helix 1 and helix 2.

3702:AT3G02230
gene id: 3702:AT3G02230
uniprot id: A0A178VK37
uniprot id: Q9SRT9
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RGP family.
messages: Golgi apparatus
messages: Heteromers with RGP2, RGP3, RGP4 and RGP5.
messages: No visible phenotype under normal growth condition, but significant reduction in total cell wall arabinose. Rgp1 and rgp2 double mutant is male gametophyte lethal, with an arrest in pollen mitosis (PubMed:17071651). RNAi-mediated knockdown of both RGP1 and RGP2 causes severe developmental defects and strong reduction in total cell wall arabinose (PubMed:21478444).
messages: Predominantly expressed in shoot and root apical meristems. Expressed in epidermal cells of leaves, inflorescence stems and seed coat. Expressed in pollen.
messages: Probable UDP-L-arabinose mutase involved in the biosynthesis of cell wall non-cellulosic polysaccharides.
messages: Reversibly glycosylated in vitro by UDP-glucose, UDP-xylose and UDP-galactose, but not UDP-mannose.
messages: The conserved DXD motif is involved in enzyme activity.
messages: UDP-L-arabinose mutase involved in the biosynthesis of cell wall non-cellulosic polysaccharides. Catalyzes the interconvertion of UDP-L-arabinopyranose (UDP-Arap) and UDP-L-arabinofuranose (UDP-Araf) in vitro. Preferentially catalyzes the formation of UDP-Arap from UDP-Araf. At thermodynamic equilibrium in vitro the ratio of the pyranose form over the furanose form is 95:5. Is not active on other UDP-sugars (UDP-Gal, UDP-Xyl, UDP-Glc, GDP-Man and GDP-Fuc) (PubMed:21478444). Functions redundantly with RGP2 and is essential for proper cell walls and pollen development. Probably involved in the formation of the pectocellulosic cell wall layer intine. Is probably active as heteromer in vivo (PubMed:17071651).
messages: cytosol

3702:AT5G62680
gene id: 3702:AT5G62680
uniprot id: A0A178UEQ7
uniprot id: Q9LV10
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 48% reduction in total glucosinolate levels in seeds. Gtr1 and gtr2 double mutant has no detectable glucosinolate in seeds.
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Expressed in roots. Detected in shoots, stems and flowers. Expressed in veins and in the root vasculature with highest expression in lateral branching points.
messages: High-affinity, proton-dependent glucosinolate-specific transporter. Involved in apoplasmic phloem-loading of glucosinolates and in bidirectional long-distance transport of aliphatic but not indole glucosinolates. May be involved in removal of glucosinolates from the xylem in roots.

3702:AT1G31690
gene id: 3702:AT1G31690
uniprot id: F4IAX0
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the copper/topaquinone oxidase family.
messages: Binds 1 copper ion per subunit (By similarity). Can also use zinc ion as cofactor (By similarity).
messages: Contains 1 topaquinone per subunit.
messages: Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:28383668). Involved in putrescine catabolism in peroxisomes in response to salt stress (PubMed:28383668). Regulates arginine-dependent nitric oxide (NO) production, a key signaling molecule regulating a wide range of physiological processes including responses to salt stress, by influencing arginine bioavailability (PubMed:28383668). Modulates primary root growth (PubMed:28383668).
messages: Decreased nitric oxide (NO) production in seedlings after elicitor treatment with 2,6-dichloroisonicotinic acid (INA) in root tips and salt stress associated with a reduced arginine availability but with a normal nitrate reductase activity in plants (PubMed:28383668). Reduced primary root length (PubMed:28383668).
messages: Expressed exclusively in leaves.
messages: Homodimer.
messages: In young seedlings, first observed in hydathodes and borders of new emerging cotyledons and in leaf primordia (PubMed:31862580). Accumulates in expanding leaves (PubMed:31862580).
messages: Induced transiently by auxin (IAA) (PubMed:31862580). Accumulates during dehydration recovery, wounding and treatment with putrescine (Put) and jasmonic acid (MeJA) (PubMed:31862580). Repressed by abscisic acid (ABA) and salicylic acid (SA) (PubMed:31862580).
messages: Peroxisome
messages: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue.

3702:AT2G29550
gene id: 3702:AT2G29550
uniprot id: A0A178VS27
uniprot id: P29515
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: There are nine genes coding for beta-tubulin.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: cytoskeleton

3702:AT3G44600
gene id: 3702:AT3G44600
uniprot id: Q8W4D0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Bushy and stunted stature.
messages: Down-regulated by auxin treatment.
messages: Interacts with FAS1 and LHP1 (PubMed:21596687). Interacts (via WD repeat domain) with histone H3 (PubMed:17704213).
messages: Nucleus
messages: PPIases accelerate the folding of proteins (Probable). It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (PubMed:33098102). Histone proline isomerase that increases the rate of cis-trans isomerization of the synthetic histone H3 peptides H3P30 (RKSAP30F-p-nitroanilide) and H3P30K27me3 (RKme3-SAP30F-p-nitroanilide) in the histone H3 N-terminal tail, in vitro (PubMed:33098102). Histone remodeling factor involved in chromatin-based gene silencing (PubMed:17704213). Reinforces H3K27 methylation (PubMed:17704213). Involved in fundamental processes of chromatin assembly and histone modification by mediating the targeting of FAS1 and LHP1 on the chromatin (PubMed:21596687). Required for the formation and development of leaves, for normal phyllotaxy and for the formation, maintenance and activity of root and shoot apical meristems (PubMed:17704213).
messages: Ubiquitous. Expressed in the meristems.

3702:AT2G42250
gene id: 3702:AT2G42250
uniprot id: O48532
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G02680
gene id: 3702:AT3G02680
uniprot id: Q0H8D7
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By X-rays.
messages: Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis.
messages: Component of the MRN complex composed of two heterodimers RAD50/MRE11 associated with a single NBN (By similarity). Interacts with MRE11.
messages: Hypersensitivity to the DNA cross-linking reagent mitomycin C.
messages: PML body
messages: The FHA and BRCT domains are likely to have a crucial role for both binding to histone H2AFX and for relocalization of MRE11/RAD50 complex to the vicinity of DNA damage.

3702:AT2G38530
gene id: 3702:AT2G38530
uniprot id: A0A178W063
uniprot id: Q9S7I3
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

3702:AT1G22070
gene id: 3702:AT1G22070
uniprot id: Q147Q9
uniprot id: Q39234
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Binds DNA as a dimer. Interacts with NPR1, NPR3 and NPR4. Interacts with GRXC7/ROXY1.
messages: Expressed in the whole plant.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

3702:AT4G36990
gene id: 3702:AT4G36990
uniprot id: A0A5S9XZZ9
uniprot id: C0SVM0
uniprot id: Q96320
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class B subfamily.
messages: By heat stress.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT5G64140
gene id: 3702:AT5G64140
uniprot id: A0A178UA91
uniprot id: P34789
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic ribosomal protein eS28 family.
messages: Cytoplasm

3702:AT2G18050
gene id: 3702:AT2G18050
uniprot id: A0A178VX64
uniprot id: P94109
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone H1/H5 family.
messages: Nucleus

3702:AT2G22942
gene id: 3702:AT2G22942
uniprot id: B3H4C2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phytosulfokine family.
messages: PSK-alpha is produced by endopeptidase digestion. PSK-beta is produced from PSK-alpha by exopeptidase digestion.
messages: Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
messages: Secreted
messages: Sulfation is important for activity and for the binding to a putative membrane receptor.

3702:AT1G02390
gene id: 3702:AT1G02390
uniprot id: Q9FZ22
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GPAT/DAPAT family.
messages: Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis.
messages: Membrane
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: Weakly or not expressed in roots, leaves, seedlings, developing siliques and flower buds.

3702:AT1G25500
gene id: 3702:AT1G25500
uniprot id: A0A654ECV4
uniprot id: F4ICI6
uniprot id: F4ICI7
uniprot id: Q9C6L9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CTL (choline transporter-like) family.
messages: Cell membrane
messages: Choline transporter.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT5G55930
gene id: 3702:AT5G55930
uniprot id: A0A654GBM2
uniprot id: Q9FG72
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.
messages: Highly expressed in flowers, and moderately expressed in leaves and stems.
messages: Involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner.
messages: Membrane

3702:AT2G07776
gene id: 3702:AT2G07776
uniprot id: A0A178U7N0
uniprot id: P93308
names: Caution
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07776) is demonstrated.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G78040
gene id: 3702:AT1G78040
uniprot id: A0A384KF55
uniprot id: Q8LD45
names: Caution
names: Similarity
messages: Belongs to the Ole e I family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G08290
gene id: 3702:AT4G08290
uniprot id: Q9SUF1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT3G23050
gene id: 3702:AT3G23050
uniprot id: A0A1I9LPC8
uniprot id: A0A5S9XEX8
uniprot id: F4J2U7
uniprot id: Q38825
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Highly expressed in stems and flowers.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT1G34220
gene id: 3702:AT1G34220
uniprot id: F4HUX0
uniprot id: Q9XIC8
names: Similarity
messages: Belongs to the IST1 family.

3702:AT4G22490
gene id: 3702:AT4G22490
uniprot id: A0A178V262
uniprot id: Q9SUX0
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT4G00380
gene id: 3702:AT4G00380
uniprot id: F4JH53
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Forms a complex with IDN2 and FDM1/IDNL1 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway.
messages: Forms a complex with IDN2 and FMD1/INDL1.
messages: Highly expressed in flowers and at lower levels in roots, leaves and stems.
messages: No visible phenotype under normal growth conditions. The double mutants idnl1-1 and idnl2-1 show a late-flowering phenotype and reduced level of DNA methylation (PubMed:22592791). The double mutants fdm1-1 and fdm2-1 show reduced level of DNA methylation and repeat-associated small interfering RNAs (ra-siRNAs) (PubMed:22302148).

3702:AT1G06840
gene id: 3702:AT1G06840
uniprot id: A0A178W3Y7
uniprot id: C0LGD7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G27270
gene id: 3702:AT1G27270
uniprot id: A0A5S9W198
uniprot id: Q9FZK9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G39518
gene id: 3702:AT2G39518
uniprot id: A0A178VV94
uniprot id: Q56X75
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT3G06630
gene id: 3702:AT3G06630
uniprot id: A0A384L5P2
uniprot id: A0A384LGB1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G53280
gene id: 3702:AT1G53280
uniprot id: Q9MAH3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase C56 family.
messages: Homodimer.
messages: May be involved in oxidative stress response.
messages: chloroplast

3702:AT4G31550
gene id: 3702:AT4G31550
uniprot id: A0A178V6A8
uniprot id: A0A1P8B8D0
uniprot id: Q9SV15
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the WRKY group II-d family.
messages: In young, mature and senescent leaves.
messages: Nucleus
messages: Reduced rhizobacterium B.cereus AR156-induced systemic resistance (ISR) to P.syringae pv. tomato DC3000 associated with reduced jasmonic acid (JA)-mediated signal pathway. Plants lacking both WRKY11 and WRKY70 are totally impaired in B.cereus AR156-mediated ISR.
messages: Strongly during leaf senescence (PubMed:11722756). Repressed by rhizobacterium B.cereus AR156 in leaves, and to a lower extent, by P.fluorescens WCS417r (PubMed:26433201).
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Regulates rhizobacterium B.cereus AR156-induced systemic resistance (ISR) to P.syringae pv. tomato DC3000, probably by activating the jasmonic acid (JA)- signaling pathway (PubMed:26433201).

3702:AT5G55132
gene id: 3702:AT5G55132
uniprot id: Q8GXV6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G24530
gene id: 3702:AT5G24530
uniprot id: A0A5S9Y747
uniprot id: Q9FLV0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: (Microbial infection) Required for susceptibility to Pseudomonas syringae pv. tomato DC3000.
messages: (Microbial infection) Required for susceptibility to the downy mildew pathogen Hyaloperonospora arabidopsidis.
messages: (Microbial infection) Required for susceptibility to the oomycete Phytophthora capsici.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Converts salicylic acid (SA) to 2,3-dihydroxybenzoic acid (2,3-DHBA) (By similarity). Suppressor of immunity. Regulates negatively defense associated genes expression (e.g. PR-1, PR-2, and PR-5) (PubMed:18248595, PubMed:25376907). Negative regulator of defense against Hyaloperonospora arabidopsidis (PubMed:25376907).
messages: In the double mutant eds1-2 dmr6-1 and in dmr6-2, reduced susceptibility to the downy mildew pathogen Hyaloperonospora arabidopsidis (PubMed:15986928, PubMed:18248595, PubMed:25376907). Reduced hyphal growth due to immature haustoria, often with aberrant shapes (PubMed:15986928, PubMed:18248595). Reduced susceptibility to Pseudomonas syringae pv. tomato DC3000 and the oomycete Phytophthora capsici, associated with enhanced defense gene expression and elevated salicylic acid levels (PubMed:25376907). Normal susceptibility to P. syringae pv. tomato and Golovinomyces orontii (PubMed:15986928). Enhanced expression of a subset of defense-associated genes (PubMed:18248595).
messages: Locally induced during infections with both compatible and incompatible Hyaloperonospora arabidopsidis isolates, specifically in cells containing haustoria or directly surrounding the intercellular hyphae (PubMed:18248595, PubMed:25376907). Induced by the salicylic acid analog BTH. Accumulates in constitutive defense mutants (e.g. sid2 and npr1 mutants) (PubMed:18248595). Accumulates upon infection with the downy mildew Hyaloperonospora arabidopsidis, the powdery mildew Erysiphe orontii, and the bacterium Pseudomonas syringae as well as salicylic acid (SA) treatment (PubMed:25376907).

3702:AT4G15180
gene id: 3702:AT4G15180
uniprot id: O23372
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
messages: Circadian-regulation with peak levels occurring in the morning under diurnal but not constant light conditions in a CCA1- and LHY-dependent manner.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: Histone methyltransferase specifically required for trimethylation of 'Lys-4' of histone H3 (H3K4me3) and is crucial for both sporophyte and gametophyte development (PubMed:21037105, PubMed:20937886). Function as a diurnal 'writer' to counteract the nocturne 'eraser' demethylase activity of JMJ14 thus orchestrating the circadian rythm of histone modifications (e.g. H3K4me3) and modulating the rythmic expression of diurnal target genes; this mechanism relies also on the circadian clock oscillators CCA1 and LHY (PubMed:31429787).
messages: Nucleus
messages: Pleiotropic effects on plant growth and development, including dwarf size, aberrant root development and sterile flowers (PubMed:20937886, PubMed:21037105). Decreased levels of CCA1 and LHY circadian oscillators transcription factors as well as of other clock genes such as TOC1, PRR5, PRR7, PRR9, GI, ELF3, ELF4, and LUX associated with reduced H3K4me3 levels near their promoters (PubMed:31429787).

3702:AT4G15720
gene id: 3702:AT4G15720
uniprot id: Q8VYH0
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT1G05291
gene id: 3702:AT1G05291
uniprot id: A0A178WE36
uniprot id: O23040
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DESIGUAL family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Only expressed in inflorescences.

3702:AT3G04240
gene id: 3702:AT3G04240
uniprot id: A0A178VFL2
uniprot id: A0A384LLW5
uniprot id: A0A5S9X8Y4
uniprot id: Q0WV85
uniprot id: Q9M8Y0
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the glycosyltransferase 41 family. O-GlcNAc transferase subfamily.
messages: Early flowering phenotype due to reduced histone H3 'Lys-4' trimethylation (H3K4me3) of FLC thus leading to lower FLC expression.
messages: Interacts with TCP14 and TCP15 (PubMed:22267487). Interacts with ATX1 (PubMed:30150325).
messages: O-linked N-acetylglucosamine transferase (OGT) that mediates O-glycosylation of capsid protein (CP) of virus in case of infection by Plum pox virus (PubMed:16014901). OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine (PubMed:16014901). Probably acts by adding O-linked sugars to yet unknown proteins. Its OGT activity has been proved in vitro but not in vivo (PubMed:12136030). Required with SPY for gamete and seed development (PubMed:16014901). Mediates O-glycosylation of the DELLA protein RGA, a repressor of the gibberellin (GA) signaling pathway (PubMed:26773002). O-glycosylation by SEC inhibits RGA binding to four of its interactors PIF3, PIF4, JAZ1, and BZR1 that are key regulators in light, jasmonate, and brassinosteroid signaling pathways, respectively (PubMed:26773002). Activates ATX1 through O-GlcNAc modification to augment ATX1-mediated H3K4me3 histone epigenetic modification at FLC locus, thus preventing premature flowering (PubMed:30150325).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G30730
gene id: 3702:AT4G30730
uniprot id: A0A384K8X5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G43520
gene id: 3702:AT2G43520
uniprot id: A0A178W058
uniprot id: O22866
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family. Protease inhibitor I18 (RTI/MTI-2) subfamily.
messages: Secreted
messages: Was initially thought to be a protease inhibitor.

3702:AT4G38310
gene id: 3702:AT4G38310
uniprot id: Q9SVF4
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G04780
gene id: 3702:AT2G04780
uniprot id: A0A654ETI4
uniprot id: Q9SJ81
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: It is uncertain whether Met-1 or Met-4 is the initiator.
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT4G34280
gene id: 3702:AT4G34280
uniprot id: Q8GYY7
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates in response to ultraviolet-B (UV-B) illumination.
messages: Hypersensitivity to ultraviolet-B (UV-B) illumination leading to short hypocotyls under UV-B; the sensitivity to UV-B is alleviated by the disruption of UVR8 and requires the presence of COP1 and HY5 (PubMed:25193399, PubMed:28735869). The double mutants dhu1-1 cop1-6 and dhu1-1 hy5-215 phenotypes resemble that of single mutants cop1-6 and hy5-215, respectively (PubMed:28735869). The UV-B responsiveness of the double mutant dhu1-1 rup1-1 is similar to that of the single mutants dhu1-1 and rup1-1 (PubMed:28735869).
messages: Interacts directly with DDB1A (PubMed:25193399). Binds to COP1 and RUP1 (PubMed:28735869).
messages: May act as a substrate receptor of a CUL4-RING E3 ubiquitin-protein ligase (CRL4) complex involved in the negative regulation of cellular responses to ultraviolet-B (UV-B) illumination, likely in coordination with RUP1 (PubMed:25193399, PubMed:28735869). Interacts with COP1 and probably prevents the formation of active UVR8-COP1 complex, thus avoiding UVR8-COP1-mediated positive regulation of UV-B responses (PubMed:28735869).
messages: Nucleus

3702:AT4G05190
gene id: 3702:AT4G05190
uniprot id: A0A1P8B702
uniprot id: F4JGP4
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-14 subfamily.
messages: By measuring the velocity of microtubule translocation, the speed of ATK5 was determined to be 6.30 um/min at 20 degrees Celsius.
messages: Composed of three structural domains; a small globular N-terminal, a central alpha-helical coiled coil and a large globular C-terminal which is responsible for the motor activity (it hydrolyzes ATP and binds microtubules).
messages: Kinesin that supports microtubule movement in an ATP-dependent manner and that functions as a minus-end directed motor as well as a plus-end tracking protein. During mitosis, is involved in early spindle assembly. Participates in the capture of antiparallel interpolar microtubules and helps in generating force to coalign microtubules.
messages: No visible phenotype under normal growth conditions, but dividing cells of mutant plants exhibit abnormally broadened mitotic spindles in metaphase and anaphase. However, this does not affect chromosome alignment and segregation. Kin14c and kin14d double mutant is gametophytically lethal (PubMed:18088313).
messages: Slightly expressed in anther lobes with pollen mother cells at anther stage 5. Strongly expressed at anther stage 6 in the tapetum and meiotic cells. Also detected in the gynoecium and the ovule.
messages: cytoskeleton
messages: phragmoplast

3702:AT2G43130
gene id: 3702:AT2G43130
uniprot id: P28187
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the small GTPase superfamily. Rab family.
messages: By abscisic acid (ABA), phosphate (Pi) deprivation, cold, sucrose, mannose, and water stress.
messages: Cell membrane
messages: Expressed in roots and actively dividing cells.
messages: Golgi apparatus membrane
messages: Interacts (via C-terminus) with GDI1. Interacts with PUX8/SAY1.
messages: Intracellular vesicle trafficking and protein transport. Binds GTP and GDP and possesses intrinsic GTPase activity.
messages: trans-Golgi network membrane

3702:AT2G43950
gene id: 3702:AT2G43950
uniprot id: O80565
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plastid outer envelope porin OEP37 (TC 1.B.47) family.
messages: During seed development, confined to green cotyledons of mature embryos. In germinating seedlings, detected in cotyledons and the root hair zone of the primary root. In older seedlings, restricted to cotyledons.
messages: Forms an hourglass-shaped multimeric complex.
messages: Ubiquitously expressed at low levels. Mostly present in cotyledons, and accumulates in seedlings and embryos.
messages: Voltage-dependent peptide-sensitive high conductance rectifying cation channel with a strong affinity for TIC32 that is imported into the chloroplast. Conductance is pH-dependent decreasing with decreasing pH values.
messages: chloroplast outer membrane

3702:AT4G11570
gene id: 3702:AT4G11570
uniprot id: Q9LDD5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.
messages: Catalyzes the dephosphorylation of 5-amino-6-(5-phospho-D-ribitylamino)uracil, also known as ARPP, but has no activity toward flavin mononucleotide (FMN) (PubMed:27490826).
messages: Homodimer.
messages: chloroplast

3702:AT5G48160
gene id: 3702:AT5G48160
uniprot id: Q9LUB7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By auxin in the root elongation zone.
messages: Expressed in roots, seedlings, stems, leaves, flowers and siliques, especially in the vasculature.
messages: First observed in the embryo proper at the four-cell stage. Later expressed throughout the embryo from the eight-cell to the bent-cotyledon stages. Until the torpedo stage of development, mostly concentrated at the root pole. Hardly detected in the suspensor. Present in seedling roots. In mature and fully differentiated young roots, restricted to root tips.
messages: No visible phenotype. When associated with OBE1 disruption, plants exhibit premature termination of the shoot meristem and impaired root apical meristem establishment, leading to a diminutive phenotype characterized by an absence of roots and defective development of the vasculature.
messages: Nucleus
messages: Probable transcription factor that acts together with OBE1 for the maintenance and/or establishment of both the shoot and root meristems, probably by controlling the expression of the meristem genes such as WUS, PLT1 and PLT2 and of genes required for auxin responses. Promotes cell meristematic activity via the WUSCHEL-CLAVATA pathway. Involved in the development of the basal pole and in auxin-mediated root and vascular development in the embryo. Confers sensitivity to turnip mosaic virus (TuMV) probably by promoting viral movement and multiplication via interaction with TuMV VPg.
messages: Self-interacts (PubMed:18403411, PubMed:19392692, PubMed:22378640). Interacts with OBE1, OBE3 and OBE4 (PubMed:19392692, PubMed:22378640). Binds to VPg of pea seed borne mosaic virus (PSbMV), turnip mosaic virus (TuMV) and lettuce mosaic virus (LMV), but not with VPg of tobacco etch virus (TEV), cowpea mosaic virus (CPMV), tomato black ring virus (TBRV) and grapevine fan leaf virus (GFLV) (PubMed:14963126).

3702:AT5G05140
gene id: 3702:AT5G05140
uniprot id: A0A5S9Y292
uniprot id: Q9FHK9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 26 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). May play a role in transcription elongation (By similarity).
messages: Component of the Mediator complex.
messages: Nucleus

3702:AT5G20140
gene id: 3702:AT5G20140
uniprot id: A0A654G2X2
uniprot id: F4K452
uniprot id: Q8VZ90
names: Similarity
messages: Belongs to the HEBP family.

3702:AT5G43840
gene id: 3702:AT5G43840
uniprot id: Q1PDN3
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family. Class A subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motif is a transcriptional activator element.
messages: Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT1G14320
gene id: 3702:AT1G14320
uniprot id: A0A178WF16
uniprot id: A0A2H1ZEB8
uniprot id: Q93VT9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Component of the small ribosomal subunit (PubMed:20516338). Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S) (By similarity). Interacts with NIK1 (PubMed:18789471, PubMed:19112492). Interacts with LIMYB (PubMed:25707794).
messages: Cytoplasm
messages: Expressed in tissues with active division, with the highest levels in 3-week-old leaves and lowest levels in senescent leaves.
messages: No visible phenotype, when heterozygous (PubMed:20516338). Lethality in the female gametophyte, when homozygous (PubMed:18694459, PubMed:20516338). Enhanced susceptibility to geminivirus infection (PubMed:18789471, PubMed:19112492).
messages: Not regulated by UV-B.
messages: Nucleus
messages: Phosphorylated by NIK1 and NIK2 in vitro.
messages: Ribosomal protein involved in translational regulation (PubMed:18694459). Contribute to general translation under UV-B stress (PubMed:20516338, PubMed:23886624). Involved in the NIK1-mediated defense response to geminivirus infection (PubMed:18789471, PubMed:19112492). Acts coordinately with LIMYB as a transcriptional repressor (PubMed:25707794).
messages: Ubiquitous, with the highest expression in flowers (PubMed:18694459). Expressed in seedlings, leaves, roots, stems and flowers (PubMed:25707794). Expressed in young leaves, mostly in dividing cells and in the hydathodes, in the root tips and lateral root primordia, in pistils, anthers, and pollen grains, and in developing seeds (PubMed:23886624).
messages: Under UV-B conditions, RPL10 proteins interact with several nuclear proteins, including RBG7 (glycine-rich RNA binding protein), which has an important role in mediating innate immune response to pathogens, and BTR1 that specifically binds to tomato mosaic virus (ToMV) genomic RNA and inhibits the local spread of virus.

3702:ArthCp059
gene id: 3702:ArthCp059
uniprot id: A0A1B1W4Y0
uniprot id: P56792
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT5G48430
gene id: 3702:AT5G48430
uniprot id: Q9LV70
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT3G01440
gene id: 3702:AT3G01440
uniprot id: A0A654FDM2
uniprot id: Q9SGH4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the psbQ family.
messages: Impaired chloroplastic NAD(P)H dehydrogenase (NDH) activity leading to the loss of post-illumination increases in Chl fluorescence, probably due to a reduced stability of the NDH complex.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (Probable). Required for both formation and activity of the chloroplast NAD(P)H dehydrogenase (NDH) complex (PubMed:20430763, PubMed:20460499).
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits. Component of the NDH lumenal subcomplex, at least composed of PnsL1, PnsL2, PnsL3, PnsL4 and PnsL5.
messages: chloroplast thylakoid membrane

3702:AT1G31885
gene id: 3702:AT1G31885
uniprot id: A0A1P8AWT2
uniprot id: A0A1P8AWV8
uniprot id: Q9C6T0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.
messages: Membrane

3702:AT1G48405
gene id: 3702:AT1G48405
uniprot id: A0A178WCQ7
uniprot id: Q9SX73
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: May be involved in the receptor-like kinase-mediated signal transduction pathway.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G75430
gene id: 3702:AT1G75430
uniprot id: A0A5S9WUL6
uniprot id: C0SV32
uniprot id: Q1PFD1
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TALE/BELL homeobox family.
messages: May form heterodimeric complexes with TALE/KNOX proteins.
messages: Nucleus
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.

3702:AT2G06210
gene id: 3702:AT2G06210
uniprot id: B5X0I6
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3) (PubMed:20363855). Involved in regulation of flowering time. Required for the expression of the MADS box genes and flowering repressors FLC, AGL27/FLM and AGL31/MAF2 (PubMed:15520273, PubMed:15472079). Required for histone H3 trimethylation on 'Lys-4' H3K4me3 at the FLC and AGL27/FLM loci (PubMed:15520273). Involved in the control of seed dormancy and germination (PubMed:21799800).
messages: Component of the nuclear PAF1 complex (PAF1C), which consists of VIP2/ELF7/PAF1, VIP3/SKI8/WDR61, VIP4/LEO1, VIP5/RTF1, VIP6/ELF8/CTR9 and CDC73 (PubMed:20363855). Interacts with VIP3 and VIP4 (PubMed:15472079).
messages: Early flowering, reduced plant size and defects in floral morphology in whorls 1-3, but fully fertile flowers (PubMed:12750345). Reduced seed dormancy and increased germination rate of freshly harvested seeds (PubMed:21799800).
messages: Expressed in roots, leaves and shoot apex.
messages: Nucleus

3702:AT1G35340
gene id: 3702:AT1G35340
uniprot id: A0A384KBX0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G31790
gene id: 3702:AT1G31790
uniprot id: Q9C6R9
names: Similarity
messages: Belongs to the PPR family. PCMP-A subfamily.

3702:AT4G12720
gene id: 3702:AT4G12720
uniprot id: A0A178V4N8
uniprot id: A0A1P8B842
uniprot id: A0A1P8B846
uniprot id: F4JRE7
uniprot id: Q9SU14
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in stems, leaves, roots, flowers and siliques.
messages: Growth retardation, constitutive pathogen resistance phenotype and increased levels of reactive oxygen species and NADH.
messages: Homodimer. Interacts with RACK1A, GG1 and GG2.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives, possibly using both NADH and ADP-ribose as substrates.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives. Can use both NADH and ADP-ribose as substrates, but not 8-oxo-dGTP, cyclic ADP-ribose, GDP-manose, UDP-glucose, ATP, or GTP. Exerts negative control of EDS1 signaling.
messages: Not inhibited by fluoride.
messages: Nucleus
messages: Rapid and transient induction by biotic and abiotic stresses. Not induced by H(2)O(2).

3702:AT1G76090
gene id: 3702:AT1G76090
uniprot id: A0A178WGT2
uniprot id: Q94JS4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
messages: Catalyzes the methyl transfer from S-adenosyl-methionine to the methylene group of 24-methylene lophenol to form 24-ethylidene lophenol.
messages: Membrane

3702:AT2G40090
gene id: 3702:AT2G40090
uniprot id: O04212
names: Similarity
messages: Belongs to the protein kinase superfamily. ADCK protein kinase family.

3702:AT1G20370
gene id: 3702:AT1G20370
uniprot id: A0A654EMB0
uniprot id: Q9LN29
names: Similarity
messages: Belongs to the tRNA pseudouridine synthase TruA family.

3702:AT2G47420
gene id: 3702:AT2G47420
uniprot id: A0A178VWJ8
uniprot id: O22268
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
messages: Expressed in rapidly dividing tissues, including root meristems and lateral root primordia, developing cotyledons and leaves, petals, anther, pollen grains and silique abscission zone.
messages: N6-adenine methyltransferase which modifies the AA dinucleotide at the plant nuclear 18S rRNA nucleotides A1785 and A1786 (PubMed:22829145). Required for generating appropriate patterns of gene expression during root development, including the cell-specific expression of transcriptional regulators involved in root hair and non-hair cells patterning (PubMed:22829145).
messages: Nucleus
messages: The inability to isolate a null mutant suggests that DIM1A is essential for viability.
messages: nucleolus

3702:AT1G24210
gene id: 3702:AT1G24210
uniprot id: A0A178W7N3
uniprot id: Q8LCT6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G24060
gene id: 3702:AT2G24060
uniprot id: A0A5S9X0Z7
uniprot id: O82234
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the IF-3 family.
messages: Chloroplast development defect, and leaf developmental abnormalities, such as virescent and serrated leaf phenotype, disorganized mesophyll cells, and altered cotyledon venation patterns.
messages: Chloroplast translation initiation factor that is essential for the coordination of leaf and chloroplast development (PubMed:27535792). IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (By similarity).
messages: Highly expressed in young, newly emerged leaves.
messages: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
messages: Monomer.
messages: chloroplast

3702:AT4G24740
gene id: 3702:AT4G24740
uniprot id: P51567
names: Similarity
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. Lammer subfamily.

3702:AT5G10260
gene id: 3702:AT5G10260
uniprot id: Q9LFT9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Golgi apparatus membrane
messages: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER) (By similarity).

3702:AT1G75980
gene id: 3702:AT1G75980
uniprot id: A0A178W5D9
uniprot id: A0JQ11
names: Similarity
messages: Belongs to the ABITRAM family.

3702:AT2G29420
gene id: 3702:AT2G29420
uniprot id: Q9ZW24
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT5G39560
gene id: 3702:AT5G39560
uniprot id: A0A178UG25
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G03450
gene id: 3702:AT3G03450
uniprot id: A0A178VH73
uniprot id: Q8GXW1
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRAS family. DELLA subfamily.
messages: Higher germination rate in the presence of glucose and at supraoptimal temperature conditions. Rga, gai, rgl1, rgl2 and rgl3 pentuple mutant displays constitutive GA responses even in the absence of GA treatment.
messages: Interacts directly with the GID2/SLY1 component of the SCF(GID2) complex. Interacts (via N-terminus) with GID1A, GID1B and GID1C (via N-terminus). Binds to bHLH transcription factors such as PIF1, PIF4, PIF6 and SPT. Interacts with the BOI proteins BOI, BRG1, BRG2 and BRG3. Interacts with TCP14 and TCP15 (PubMed:25655823). Binds to and coactivates GAF1/IDD2 and ENY/IDD1 (PubMed:25035403). Binds to PDF2 and ATML1 (PubMed:24989044).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Phosphorylated. Phosphorylation on Tyr residues is required for proteasome-mediated degradation in response to gibberellic acid (GA). Dephosphorylation may be prerequisite for its degradation by the proteasome.
messages: Predominantly expressed in germinating seeds, flowers and siliques. Only detectable in the inflorescence, with high levels in young flower buds and significant levels in siliques. In imbibed seeds, it is restricted to seed coats, elongating regions of pre-emergent and recently emerged radicles, endosperm (especially micropylar endosperm), and embryonic axis. Not expressed in leaves, bolting stems or roots.
messages: Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. Acts as a major GA-response repressor of seed germination, including seed thermoinhibition. Promotes the biosynthesis of abscisic acid (ABA), especially in seed coats to maintain seed dormancy. Delays flowering and adult leaf production. Also regulates the floral development, petal, stamen and anther development, by repressing the continued growth of floral organs. Its activity is probably regulated by other phytohormones such as auxin and ethylene. Involved in the regulation of seed dormancy and germination, including glucose-induced delay of seed germination (PubMed:24989044). Promotes salt tolerance. Acts as a repressor of positive regulators of trichome initiation. Required during the flagellin-derived peptide flg22-mediated growth inhibition. Contributes to the susceptibility to the biotrophic pathogen P.syringae pv. tomato and to the resistance to the necrotrophic pathogens B.cinerea A.brassicicola, probably by repressing the SA-defense pathway and preventing cell death. Prevents stress-induced reactive oxygen species (ROS) accumulation (e.g. salt stress) by acting on the ROS scavenging system, and delays ROS-induced cell death, thus promoting stress tolerance.
messages: The DELLA motif is required for its GA-induced degradation but not for the interaction with GID2.
messages: Ubiquitinated (Probable). Upon GA application or seed imbibation, it is ubiquitinated by the SCF(GID2) complex, leading to its subsequent degradation.
messages: Up-regulated transiently following seed imbibition to decline rapidly as germination proceeds; this induction is delayed at supraoptimal temperature conditions (e.g. 34 degrees Celsius). Accumulates in seed coats of dormant seeds where germination does not occur after imbibition. Increased levels upon abscisic acid (ABA) treatment. Down-regulated by norflurazon (NF), an ABA biosynthesis inhibitor. Induced by stress such as glucose, salt or mannitol treatment. Upon seed imbibition, increased GA levels in the epidermis reduce DELLA proteins (e.g. GAI/RGA2, RGA/RGA1/GRS and RGL2/SCL19) abundance and release, in turn, ATML1 and PDF2 which activate LIP1 expression, thus enhancing germination potential (PubMed:24989044).

3702:AT1G04710
gene id: 3702:AT1G04710
uniprot id: A0A178W7T5
uniprot id: Q8LF48
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Thiolase family.
messages: Homodimer.
messages: Involved in fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Implicated in jasmonic acid (JA) biosynthesis (By similarity).
messages: Low levels in seedlings and leaves.
messages: Peroxisome

3702:AT2G31570
gene id: 3702:AT2G31570
uniprot id: A0A178VYF3
uniprot id: O04922
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutathione peroxidase family.
messages: By salt stress and metals. Up-regulated by salicylic acid (SA).
messages: Expressed in leaves, stems, flowers, green siliques and roots.
messages: Interacts with DJ1A.
messages: May constitute a glutathione peroxidase-like protective system against oxidative stresses.
messages: Nucleus
messages: cytosol

3702:AT2G42410
gene id: 3702:AT2G42410
uniprot id: Q9SLB8
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots, stems, axillary buds and flowers.
messages: Nucleus
messages: Plants over-expressing ZFP11 show are dwarf, have abnormal leaf morphology, flower early and most of the plants are sterile. The stunting phenotype is due to reduced cell size and cell numbers.
messages: Probable transcription factor that may regulate cell division and growth.

3702:AT3G16460
gene id: 3702:AT3G16460
uniprot id: O04310
names: Similarity
names: Subunit
messages: Belongs to the jacalin lectin family.
messages: Component of the PYK10 complex, at least composed of PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31, JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.

3702:AT3G53600
gene id: 3702:AT3G53600
uniprot id: Q9LFG0
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Contains a slightly degenerated ERF-associated amphiphilic repression (EAR) motif, which may be involved in the activity of transcriptional repression.
messages: Decreased tolerance to drought stress.
messages: Induced by jasmonic acid (MeJA) and gradually by wounding (PubMed:14973281). Accumulates in response to dehydration stress (PubMed:28586434). Induced by cold, osmotic, salt and drought stresses in roots and shoots, and by UV-B and wounding in shoots (PubMed:28586434).
messages: Mostly expressed in stems, siliques and leaves, and, to a lower extent, in cotyledons, hypocotyls and roots.
messages: Nucleus
messages: Transcription factor involved in stress responses (Probable) (PubMed:28586434). Positive regulator of the jasmonic acid (JA)- mediated signaling pathway (PubMed:14973281). Triggers the up-regulation of LOX3, VSP2, PAL1 and PAL2 in a JA-dependent manner (PubMed:14973281). Promotes drought and osmotic stress tolerance by preventing reactive oxygen species (ROS) production (e.g. H(2)O(2)) (PubMed:28586434).

3702:AT5G18900
gene id: 3702:AT5G18900
uniprot id: A0A654G2F9
uniprot id: Q8LAN3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P4HA family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G34630
gene id: 3702:AT1G34630
uniprot id: A0A1P8ANV7
uniprot id: Q8VZG0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM135 family.
messages: Membrane

3702:AT4G34660
gene id: 3702:AT4G34660
uniprot id: Q8VWF1
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Cytoplasm
messages: Delayed germination, but almost normal growth after germination in sh3p2 partial mutants (PubMed:28584166). RNAi plants exhibit cytokinesis-defective phenotypes associated with the aggregation of vesicles at the leading edge of the cell plate and abnormal cytosolic localization of DRP1A in dividing cells (PubMed:28584166).
messages: Highly expressed in seedlings. Detected in flowers, leaves and stems.
messages: Homodimer (PubMed:24249832, PubMed:28584166). Interacts with FREE1 (PubMed:25699591, PubMed:25624505). Interacts (via SH3 domain) with ATG8E and ATG8F (PubMed:24249832). Component of a phosphoinositide 3-kinase (PI3K) complex containing ATG6, SH3P2 and FREE1 (PubMed:25624505, PubMed:24249832). Binds to SH3P3 and DRP1A (PubMed:28584166). Forms a complex made of SH3P2 and DRP1A and triggers its accumulation at the cell plate (PubMed:28584166).
messages: Knockdown of SH3P2 is developmentally lethal and significantly suppresses autophagosome formation.
messages: Late endosome
messages: Regulator for autophaosome formation and/or maturation (PubMed:24249832, Ref.9). Binds phosphatidylinositol-phosphate; highest affinity for vesicles containing PtdIns(3,4,5)P(3), followed by those containing PtdIns(4,5)P(2) and PtdIns(3,4)P(2), with minimal binding to phosphatidylinositol monophosphates, including PtdIns(3)P (PubMed:24249832, PubMed:28584166). Together with DRP1A, converts the fused vesicles to tubular structures at the cell plate during cytokinesis (PubMed:28584166).
messages: The N-terminal BAR domain is required for the interaction with FREE1.
messages: autophagosome membrane
messages: clathrin-coated vesicle

3702:AT1G33670
gene id: 3702:AT1G33670
uniprot id: Q4PT10
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.

3702:AT3G18260
gene id: 3702:AT3G18260
uniprot id: Q9LJQ5
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3702:AT2G07785
gene id: 3702:AT2G07785
uniprot id: A0A654GF24
uniprot id: Q3EC42
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 1 family.
messages: Cell membrane
messages: Membrane

3702:AT5G39950
gene id: 3702:AT5G39950
uniprot id: Q38879
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioredoxin family. Plant H-type subfamily.
messages: Cytoplasm
messages: Interacts with MDH1.
messages: Mitochondrion
messages: Thiol-disulfide oxidoreductase probably involved in the redox regulation of a number of cytosolic enzymes. Possesses insulin disulfide bonds reducing activity.

3702:AT5G16453
gene id: 3702:AT5G16453
uniprot id: A0A178UGJ3
uniprot id: Q2V371
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G25880
gene id: 3702:AT2G25880
uniprot id: A0A178VY38
uniprot id: A0A1P8B224
uniprot id: A0A1P8B232
uniprot id: F4ITJ0
uniprot id: Q683C9
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Abundant in roots, flowers and flower buds, low or absent in expanded leaves, stems and siliques.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. Aurora subfamily.
messages: Expression peaks at mitosis.
messages: Nucleus membrane
messages: Phosphorylates specifically 'Ser-10' of histone H3 in vitro. Associates with cytoskeletal structures that are necessary for cytokinesis and with the microtubule spindle. Might colocalize with gamma-tubulin and function in microtubule organizing centers (MTOCs).
messages: Phosphorylation at Thr-173 may regulate activity and degradation of AUR2 in a cell cycle dependent manner.
messages: spindle
messages: spindle pole

3702:AT1G52070
gene id: 3702:AT1G52070
uniprot id: A0A1P8AR36
uniprot id: Q8GWI7
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT1G25330
gene id: 3702:AT1G25330
uniprot id: A0A654EEE4
uniprot id: A4D998
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT4G30060
gene id: 3702:AT4G30060
uniprot id: A0A384KYE2
uniprot id: Q8W4E9
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G12270
gene id: 3702:AT5G12270
uniprot id: A0A178UBW5
uniprot id: Q94CL5
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT4G30260
gene id: 3702:AT4G30260
uniprot id: A0A384KLW9
uniprot id: Q93VH1
uniprot id: Q9SUL8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the YIP1 family.
messages: Expressed in developing root hair cells.
messages: Homodimer and heterodimer with YIP4A (PubMed:23832588). Component of a trans-Golgi network (TGN)-localized ECH/YIP4 complex made of ECH, YIP4A and YIP4B (PubMed:23832588). Interacts directly with ECH (PubMed:23832588).
messages: Membrane
messages: No visible phenotype (PubMed:23832588). The double mutant yip4a yip4b exhibits disturbed trans-Golgi network (TGN)-Golgi association and cell elongation defects leading to reduced roots and hypocotyls growth associated with an abnormal cell wall composition and a mislocalization of trans-Golgi network (TGN)-localized proteins SYP61 and VHA-a1 (PubMed:23832588, PubMed:30770391). The double mutant yip4a yip4b has also a reduced number of root trichoblasts displaying Rho-of-plant (ROPs e.g. ARAC4/ROP2, ARAC5/ROP4 and ARAC3/ROP6) patches and leading to an almost complete absence of root hairs (PubMed:30770391).
messages: Together with YIP4A, involved in the regulation of cell elongation during root and hypocotyl growth (PubMed:23832588). YIP4A and YIP4B are central trafficking components in Rho-of-plant (ROPs, e.g. ARAC4/ROP2, ARAC5/ROP4 and ARAC3/ROP6) small GTPases-dependent root hair formation, thus contributing to activation and plasma membrane accumulation of ROPs during hair initiation (PubMed:30770391). The ECH/YIP4 complex is involved in the modulation of the trans-Golgi network (TGN)-mediated trafficking of some proteins and cell wall components (e.g. pectin and hemicellulose) to the cell wall in dark-grown hypocotyls and in secretory cells of the seed coat (PubMed:23832588).
messages: Ubiquitous expression in elongating root hair and non-hair cells prior to hair formation.
messages: trans-Golgi network membrane

3702:AT3G66654
gene id: 3702:AT3G66654
uniprot id: A0A178VHR2
uniprot id: Q9C835
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Down-regulated by dark treatment.
messages: Membrane
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: Ubiquitous.

3702:AT5G07090
gene id: 3702:AT5G07090
uniprot id: A0A178UFG0
uniprot id: F4K5C7
uniprot id: P49204
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic ribosomal protein eS4 family.
messages: Cytoplasm
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G35900
gene id: 3702:AT4G35900
uniprot id: A0A1P8B8Q9
uniprot id: A0A7G2F8I8
uniprot id: Q84JK2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Highly expressed in shoot apex.
messages: Nucleus
messages: Phosphorylated at Thr-282 in a calcium-dependent manner by CPK6 and CPK33.
messages: Self-interacts (PubMed:16099979). Interacts with FT and FDP/BZIP27 (PubMed:16099979, PubMed:16099980, PubMed:25661797). Interacts with GRF3 and GRF4, and in a calcium-independent manner, with CPK6 and CPK33 (PubMed:25661797).
messages: Transcription factor required for the transition to flowering promoted by FT.

3702:AT2G21430
gene id: 3702:AT2G21430
uniprot id: A0A178VSI2
uniprot id: P43295
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C1 family.
messages: By wilting and abscisic acid (ABA) (PubMed:8018874). Induced by drought stress (PubMed:12102506).
messages: Lytic vacuole
messages: Probable thiol protease.

3702:AT1G70230
gene id: 3702:AT1G70230
uniprot id: A0A178WG99
uniprot id: O04523
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: A naturally occurring ecotype (cv. Ty-0) lacks AXY4-mediated xyloglucan O-acetylation due to 2 amino acid changes, Asp367Glu and Gly368Lys (PubMed:22086088).
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Golgi apparatus membrane
messages: No visible phenotype. Loss of O-acetylated xyloglucan oligosaccharides in roots and rosette leaves, but no effect on xyloglucan O-acetylation in seeds.
messages: Xyloglucan acetyltransferase that catalyzes the acetylation of fucosylated Gal residues on xyloglucan side chains (PubMed:30083810). Predominantly catalyze 6-O-monoacetylation of Gal residues in the Fuc-Gal-Xyl trisaccharide side chains of xyloglucan oligomers (PubMed:30083810). Involved in xyloglucan specific O-acetylation in roots and rosette leaves (PubMed:22086088).

3702:AT5G20410
gene id: 3702:AT5G20410
uniprot id: O82730
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Auxin activates expression during Pi starvation, whereas cytokinin represses it.
messages: Belongs to the glycosyltransferase 28 family.
messages: Expressed mainly in floral buds. Detected in roots, leaves, stems, siliques and pollen tubes.
messages: Induced by phosphate deprivation (PubMed:11553816, PubMed:14730084, PubMed:16762032). Induced in rosette leaves when grown in acidic soil (PubMed:31201686).
messages: Inhibited by galvestine-1.
messages: Involved in the synthesis of monogalactosyldiacylglycerol, the major structural component of photosynthetic membranes and in the chloroplast envelope biogenesis. Can use both prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the eukaryotic one. Plays a minor role in galactolipid synthesis in chloroplasts (PubMed:11553816). Is required for membrane lipid remodeling in phosphate-starved roots (PubMed:18808455, PubMed:31201686). Acts as the minor factor involved in digalactosyldiacylglycerol (DGDG) biosynthesis in phosphate-starved roots (PubMed:18808455). Does not seem to be required for plant growth under nutrient-sufficient conditions (PubMed:18808455). Required for membrane lipid remodeling in plants grown in acidic conditions (PubMed:31201686).
messages: Low and continuous expression throughout whole developmental stages.
messages: chloroplast outer membrane

3702:AT1G10700
gene id: 3702:AT1G10700
uniprot id: A0A1P8ANQ1
uniprot id: Q93Z66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ribose-phosphate pyrophosphokinase family.
messages: chloroplast

3702:AT5G20300
gene id: 3702:AT5G20300
uniprot id: F4K480
uniprot id: Q6S5G3
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. TOC159 subfamily.
messages: Binds 1 Mg(2+) ion by subunit.
messages: By light conditions.
messages: Cytoplasm
messages: Expressed in seedlings, leaves, flowers, and roots.
messages: GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis. Probably specialized in the import of nuclear encoded photosynthetic preproteins from the cytoplasm to the chloroplast.
messages: Homodimer (By similarity). Part of the TOC core complex that includes 1 protein for the specific recognition of transit peptides surrounded by a ring composed of four proteins forming translocation channels, and four to five GTP-binding proteins providing energy. This core complex can interact with components of the TIC complex to form a larger import complex. Chloroplastic protein precursor such as prSS (precursor of the RuBisCO small subunit) interacts with these complexes. The TOC complex contains a specific subset of polar lipids such as digalactosyldiacylglyceride (DGDG), phosphatidylcholine (PC) and phosphatidylglycerol (PG). Interacts with TOC33 and TOC75.
messages: Membrane
messages: chloroplast outer membrane

3702:AT4G29150
gene id: 3702:AT4G29150
uniprot id: A0A178V3F0
uniprot id: F4JMV6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G05530
gene id: 3702:AT2G05530
uniprot id: A0A178VQT1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G26630
gene id: 3702:AT4G26630
uniprot id: Q9SUA1
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Chromatin-associated protein which contributes to the modulation of chromatin structure (such as super-helical structure of DNA) and function (PubMed:25387881). Binds to chromatin of protein-coding genes throughout the genome to regulate nucleosome occupancy and chromatin accessibility, and to modulate the expression of target genes (PubMed:25387881). Negative regulator of stress tolerance (e.g. high salt) (PubMed:25387881).
messages: Found in a mRNA splicing-dependent exon junction complex (EJC) (PubMed:25387881). Binds specifically histones H3 and H4 (PubMed:25387881). Interacts with TOP1A, SCC3, At1g61730, At1g20940, At1g13930, DEK4, HDT1, NIT1, SHL, CYP19-1, GEBPL, HSP70-3, PDP2, PDP3, KIN2, RPL11A and PDS5A (PubMed:25387881).
messages: Highly expressed in young seedlings.
messages: Increased expression of some target genes (e.g. TOP1A, EFS, MBD9, NUP160, DEK1, BIG, HB-1 and CMT3), but reduced expression of other target genes (e.g. HKL1 and PDS5) (PubMed:25387881). Increased salt stress tolerance leading to a better seed germination in high salt conditions (PubMed:25387881).
messages: Nucleus
messages: Strongly and rapidly down-regulated by salt stress in shoots and roots.
messages: nucleolus

3702:AT5G54070
gene id: 3702:AT5G54070
uniprot id: A0A178UP77
uniprot id: Q9LVW2
names: Developmental Stage
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class A subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: Seed-specific transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). Seems to be specialized for the developmental expression of heat shock protein (HSP) genes during seed maturation. Activated by ABI3.
messages: Starts to be expressed in seeds from 18 days after pollination (DAP) to reach the highest expression in dry seeds. Expression is strongly reduced after only 2 hours of seed imbibition, declines drastically after 6 hours, but can be detected at a very low level even after 10 hours.
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.

3702:AT5G66060
gene id: 3702:AT5G66060
uniprot id: A0A7G2FN34
uniprot id: F4JZ24
uniprot id: F4JZ25
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P4HA family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G47300
gene id: 3702:AT3G47300
uniprot id: Q9STZ2
names: Similarity
messages: Belongs to the SelWTH family. SELT subfamily.

3702:AT3G21890
gene id: 3702:AT3G21890
uniprot id: Q9LRM4
names: Function
names: Induction
names: Tissue Specificity
messages: Circadian-regulation. Peak of expression toward the end of the dark period in both long day and short day photoperiods.
messages: Developmental regulator acting by forming heterodimeric complexes, that sequester CO and CO-like (COL) proteins into non-functional complexes (PubMed:27015278). Involved in the CO-mediated long-day flowering-promotion pathway (PubMed:27015278). Engages CO and the transcriptional repressor TPL in a tripartite complex (By similarity). Involved in the CO-mediated long-day flowering-promotion pathway (PubMed:27015278).
messages: Highly expressed in shoot apical meristems and in vascular tissues of leaves. Also detected in petioles.

3702:AT1G09200
gene id: 3702:AT1G09200
uniprot id: A0A384L1I5
uniprot id: P59226
uniprot id: Q0WRA9
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Can be acetylated to form H3K9ac, H3K14ac, H3K18ac and H3K23ac. H3K9ac could compete with H3K9me and prevent gene silencing. H3K9acK14ac molecules are 30-fold less abundant than H3K9ac or H3K14ac. Very low level of H3K9meK14ac. H3K14 is specifically acetylated by HAG1 and deacetylated by HDA6. H3K9ac is deacetylated by HDT1. H3K9ac is restricted to euchromatin. H3K18ac, but not H3K9ac, is cell-cycle dependent and linked to replication. Reduced H4R3me2s increases H3K14ac in the FLC chromatin and activates or maintains its transcription. Vernalization decreases H3K9/14ac in the promoter region of FLC.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Expressed during the S phase.
messages: Expressed in inflorescences, buds and seedlings.
messages: In meta- and anaphase, H3T11ph is found on the entire length of the condensed chromosomes, whereas H3S10ph and H3S28ph are confined to the pericentromeric regions. During the first meiotic division, H3S10ph and H3S28ph are found on the entire length of the chromosome. Both sites may be involved in sister chromatid cohesion. No phosphorylation detected during interphase. AUR1 and AUR2 phosphorylate only H3S10, while AUR3 phosphorylates both H3S10 and H3S28.
messages: Mono-, di- or trimethylated to form mainly H3K4me1/2/3, H3K9me1/2/3, H3K27me1/2/3 and H3K36me1/2/3. Very low monomethylation at H3K18me1 or H3K23me1. H3K4me1/2/3, H3K9me3, H3K27me3 and H3K36me1/2/3 are typical marks for euchromatin, whereas heterochromatic chromocenters are enriched in H3K9me1/2 and H3K27me1/2. H3K27me3 is largely restricted to the transcribed regions of single genes and not associated with low-nucleosome density regions. SUVR1 to SUVR5, ASHH1 to ASHH3, ASHR1 to ASHR3, and ATXR5 and ATXR6 methylate H3, with ASHH2 methylating specifically H3K4 and H3K36 and ATXR5 and ATXR6 monomethylating specifically H3K27me1 (PubMed:35298257). The Su(var)3-9 homolog proteins (SUVH1 to SUVH10) are H3K9-specific methyltransferases. Among them, KRYPTONITE (SUVH4) is only involved in di- or trimethylation. Regarding H3K9, the major forms are H3K9me1 (20%) and H3K9me2 (10%), while H3K9me3 is rare (0.2%). H3K9me is controlled by DNA methylation and is not required for the formation of constitutive heterochromatin, but double methylation H3K9meK27me is required for the recruitment of CMT3 to methylate heterochromatin and silence euchromatic loci. Very low level of H3K9meK14ac. 60% of H3K27 is found under the form of H3K27me1, 16% of H3K27me2 and 5% of H3K27me3. When associated with H3K27me, H3K36 can only be mono- or di-methylated. H327me2K36me1 or H3K27me1K36me2 are both found in 3% of the proteins. When not associated with H3K27me, H3K36 is only trimethylated. H3K36me3 is found in 3% of the proteins. H2BK143ub1 is probably prerequisite for H3K4me. Elevated H3K4me3 and H3K36me2 formed by ASHH2 are required for high FLC expression. Vernalization increases H3K9me2 and H3K27me2/3 and decreases H3K4me2 at the FLC locus, resulting in the epigenetic silencing of this floral repressor.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. The H3K9meK27me dimethylated N-terminal tail of histone H3 can directly interact with the chromodomains of CMT3 and/or LHP1 (PubMed:11898023, PubMed:15457214). Interacts with ORTH2 (PubMed:17242155). Interacts (in absence of H3K27me) with TSK (PubMed:35298257).
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4me1/2/3 = mono-, di- and trimethylated Lys-5; H3K9me1/2/3 = mono-, di- and trimethylated Lys-10; H3K9ac = acetylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14ac = acetylated Lys-15; H3K18ac = acetylated Lys-19; H3K18me1 = monomethylated Lys-19; H3K23ac = acetylated Lys-24; H3K23me1 = monomethylated Lys-24; H3K27me1/2/3 = mono-, di- and trimethylated Lys-28; H3S28ph = phosphorylated Ser-29; H3K36me1/2/3 = mono-, di- and trimethylated Lys-37.

3702:AT1G52910
gene id: 3702:AT1G52910
uniprot id: A0A178W7B3
uniprot id: Q9C930
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Membrane

3702:AT5G44920
gene id: 3702:AT5G44920
uniprot id: Q0WSX8
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Could play a role in nuclear morphology, specifically nuclear size.
messages: Forms homomers. Interacts with SUN1, SUN2, SUN3, SUN4 and SUN5.
messages: Nucleus membrane
messages: Shorter roots.
messages: The KASH domain, which contains a transmembrane domain, mediates the nuclear envelope targeting and is involved in the binding to the SUN proteins.
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT5G38690
gene id: 3702:AT5G38690
uniprot id: Q8RW95
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Nucleus

3702:AT1G14910
gene id: 3702:AT1G14910
uniprot id: A0A178W3S8
uniprot id: A0A178W5R2
uniprot id: A0A384L4B8
uniprot id: P94017
names: Caution
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in the whole plant.
messages: Golgi apparatus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vesicle
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT4G28080
gene id: 3702:AT4G28080
uniprot id: F4JKH6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Down-regulated by sucrose.
messages: Expressed in the non-epidermal tissues of the true leaves (PubMed:21185286). Not detected in the vegetative shoot meristem and leaf primordia (PubMed:21185286).
messages: Negatively regulates meristematic tissue proliferation by integrating developmental signals with carbon source availability (PubMed:21185286). May act as the scaffold of a protein complex, which sequesters key factors that are required for the G2 to M transition in meristematic tissues (PubMed:21185286). Together with REC2, REC3 and FMT/CLU, contributes to the establishment of the cellular volume devoted to the chloroplast compartment (PubMed:26862170).
messages: No visible phenotype (PubMed:21185286). Reduced proportion of the cellular volume devoted to chloroplasts leading to an abnormal chloroplasts distributions (PubMed:26862170). Lower levels of chlorophyll, especially in plants lacking REC1, REC2, REC3 and FMT/CLU (PubMed:26862170).
messages: Nucleus
messages: The sucrose repression of TSS is a response specific to the rescue of stip mutants, and the presence of STIP in the wild-type may be sufficient to repress TSS expression even under sugar deprivation.
messages: cytosol

3702:AT3G12580
gene id: 3702:AT3G12580
uniprot id: A0A178VCC0
uniprot id: Q9LHA8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abnormal embryogenesis. Defective seedlings with high levels of reactive oxygen species and monoubiquitinated LHCB4 precursors (PubMed:20028838). No visible phenotype under normal growth conditions (PubMed:28004282).
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.
messages: Expressed in cotyledons, leaves, stems, vascular bundles, roots, stigmas and anthers.
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable). ATP-dependent molecular chaperone that assists folding of unfolded or misfolded proteins under stress conditions. Mediates plastid precursor degradation to prevent cytosolic precursor accumulation, together with the E3 ubiquitin-protein ligase CHIP. Recognizes specific sequence motifs in transit peptides and thereby led to precursor degradation through the ubiquitin-proteasome system. Plays a critical role in embryogenesis.
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions.
messages: Induced by heat shock and cold (PubMed:11402207). Induced by high light treatment and oxidative stress (PubMed:19704521). Up-regulated by viral infection (PubMed:15805473). Induced by infection with the bacterial pathogen Pseudomonas syringae (PubMed:18065690). Induced by abscisic acid (ABA), salt stress, osmotic shock, brassinosteroid, cytokinin and auxin (PubMed:28004282).
messages: Interacts with CHIP (PubMed:20028838). Interacts with HSFA1A/HSF1 (PubMed:11807141).
messages: Nucleus
messages: Up-regulated during seed maturation.
messages: cytosol

3702:AT2G16920
gene id: 3702:AT2G16920
uniprot id: Q9ZVX1
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT3G14420
gene id: 3702:AT3G14420
uniprot id: A0A654FH32
uniprot id: A8MS37
uniprot id: B3H4B8
uniprot id: Q2V3V9
uniprot id: Q9LRR9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
messages: Catalyzes the oxidation of glycolate to glyoxylate, with a reduction of O2 to H2O2 (PubMed:25416784). Is a key enzyme in photorespiration in green plants (Probable).
messages: Homotetramer.
messages: Peroxisome

3702:AT4G39900
gene id: 3702:AT4G39900
uniprot id: A0A178UYF2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G66070
gene id: 3702:AT5G66070
uniprot id: A0A178UPF9
uniprot id: Q9FKX5
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. NIP subfamily.
messages: May be involved in the early steps of the plant defense signaling pathway.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by chitin.
messages: Was originally assigned as a member of the E3 ubiquitin-protein ligase ATL subfamily.

3702:AT2G36710
gene id: 3702:AT2G36710
uniprot id: Q9ZQA3
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed in siliques.
messages: Expressed throughout silique development.
messages: cell wall

3702:AT4G08875
gene id: 3702:AT4G08875
uniprot id: A0A178USS8
uniprot id: Q2V3K2
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G77170
gene id: 3702:AT1G77170
uniprot id: Q3ECB8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT4G21192
gene id: 3702:AT4G21192
uniprot id: A0A178UXD7
uniprot id: Q0WSU0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CMC family.
messages: Mitochondrion

3702:AT4G33730
gene id: 3702:AT4G33730
uniprot id: A0A178UVX6
uniprot id: O81889
names: Function
messages: Probably involved in the defense reaction of plants against pathogens.

3702:AT5G60500
gene id: 3702:AT5G60500
uniprot id: A0A654GDW7
uniprot id: Q8LED0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.
messages: Endoplasmic reticulum membrane

3702:AT4G36810
gene id: 3702:AT4G36810
uniprot id: A0A384KAT6
uniprot id: P34802
uniprot id: Q0WUL9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Expressed ubiquitously.
messages: Heterodimeric geranyl(geranyl)-diphosphate (GPP) synthase large subunit. In vitro, the large subunit catalyzes mainly the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate while the small subunit alone is inactive. Upon association of the two subunits, the product profile changes and the production of gerany-diphosphate is strongly increased.
messages: Monomer. Part of a heterodimeric geranyl(geranyl)diphosphate synthase. Interacts with GGR.
messages: chloroplast

3702:AT1G32900
gene id: 3702:AT1G32900
uniprot id: A0A384KPX2
uniprot id: Q9MAQ0
uniprot id: W8PW06
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Circadian-regulation. Strong up-regulation at the end of the night and the beginning of the light period.
messages: Expressed in roots, inflorescences, flowers, fruits and at much higher levels in leaves.
messages: Interacts with PTST. This interaction is critical for the localization to starch granules.
messages: Production of amylose-free starch.
messages: Required for the synthesis of amylose (PubMed:25710501). Destroyed as it is released from the starch granules during the night (PubMed:15347792). The circadian expression is controlled by CCA1 and LHY transcription factors (PubMed:12777053).
messages: amyloplast
messages: chloroplast

3702:AT2G18370
gene id: 3702:AT2G18370
uniprot id: A0A178VTK3
uniprot id: Q9ZPW9
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).

3702:AT1G65960
gene id: 3702:AT1G65960
uniprot id: A0A178WE81
uniprot id: Q42472
uniprot id: Q56W28
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the group II decarboxylase family.
messages: Catalyzes the conversion of glutamate to 4-aminobutanoate (GABA). The calmodulin-binding is calcium-dependent and it is proposed to directly or indirectly form a calcium regulated control of GABA biosynthesis.
messages: Expressed in roots, inflorescence stems, flowers, siliques and leaves.
messages: Homohexamer (By similarity). Interacts with calmodulin.
messages: No visible phenotype.
messages: The C-terminus (463-494) binds calmodulin in a calcium-dependent fashion.
messages: Up-regulated by calmodulin binding at physiological pH.
messages: Up-regulated by salt treatment (PubMed:20122158). Up-regulated by nitrogen treatments such as ammonium chloride, ammonium nitrate, glutamate and glutamine but not by potassium nitrate (PubMed:9701597). Down-regulated by hypoxia (PubMed:18077464).

3702:AT1G60620
gene id: 3702:AT1G60620
uniprot id: A0A178W5W0
uniprot id: A0A1P8AMT1
uniprot id: Q39216
names: Similarity
messages: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase subunit family.

3702:AT2G47410
gene id: 3702:AT2G47410
uniprot id: A0A384KA14
uniprot id: A0A384L4J4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G16690
gene id: 3702:AT5G16690
uniprot id: A0A178UNG9
uniprot id: A0A1P8BC82
uniprot id: Q6E7H0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ORC3 family.
messages: Component of the origin recognition complex (ORC) composed of at least ORC1 (ORC1A or ORC1B), ORC2, ORC3, ORC4, ORC5 and ORC6. ORC is regulated in a cell-cycle and development dependent manner. It is sequentially assembled at the exit from anaphase of mitosis and disassembled as cells enter S phase. Interacts directly with ORC1A, ORC2, ORC4, ORC5 and ORC6.
messages: Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet.
messages: Follow a cell-cycle regulation with a peak at the G1/S-phase (PubMed:16179646). Mostly expressed in siliques and flowers, and, to a lower exent, in flower buds, leaves, roots and stems (PubMed:16179646, PubMed:15358564).
messages: Nucleus
messages: Regulated by E2F (PubMed:16179646, PubMed:16126853). Accumulates rapidly after cell cycle reactivation by sucrose addition following cell cycle arrest mediated by sucrose deprivation (PubMed:16179646, PubMed:15358564).

3702:AT3G14770
gene id: 3702:AT3G14770
uniprot id: A0A178VM79
uniprot id: Q9LH79
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SWEET sugar transporter family.
messages: Cell membrane
messages: Forms heterooligomers with SWEET17.
messages: Mediates both low-affinity uptake and efflux of sugar across the membrane.
messages: Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
messages: Membrane
messages: Slightly induced by the powdery mildew fungus G.cichoracearum and the pathogenic bacteria P.syringae pv. tomato.

3702:AT5G41700
gene id: 3702:AT5G41700
uniprot id: A0A178UE87
uniprot id: B9DFD0
uniprot id: P35131
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Highest expression in young stems, old leaves. Lowest levels in floral buds, anthers and young leaves.
messages: Interacts with CIP8, CHIP, NLA and XERICO.
messages: Not induced by heat shock or wounding.
messages: Up-regulated during senescence, but not during the G0 to S phase transition.

3702:AT3G46660
gene id: 3702:AT3G46660
uniprot id: Q94AB5
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro.

3702:AT4G08570
gene id: 3702:AT4G08570
uniprot id: O81464
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.
messages: Interacts with ZHD11/HB29.

3702:AT5G61760
gene id: 3702:AT5G61760
uniprot id: Q9FLT2
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the inositol phosphokinase (IPK) family.
messages: Does not bind calmodulin.
messages: Down-regulated by KIN10 through its protein phosphorylation.
messages: Expressed in leaves, stems, roots, siliques and flowers. Detected in vascular strands, stigma cells, the abscission zones of fully elongated siliques, the root central cylinder and the root tip.
messages: Expressed in mature pollen, but not in immature pollen grains.
messages: Induced by auxin, but not by salt, abscisic acid, mannitol, water or drought.
messages: Inositol phosphate kinase with a broad substrate specificity. Phosphorylates inositol 1,4,5-trisphosphate (Ins(1,4,5)P3), inositol 1,4,5,6-tetrakisphosphate (Ins(1,4,5,6)P4), inositol 1,3,4,5-tetrakisphosphate (Ins(1,3,4,5)P4), inositol 1,3,4,6-tetrakisphosphate (Ins(1,3,4,6)P4) and inositol 1,2,3,4,6-pentakisphosphate (Ins(1,2,3,4,6)P5) but not inositol 1,4-bisphosphate (Ins(1,4)P2), inositol 1,3,4-trisphosphate (Ins(1,3,4)P3), inositol 1,2,6-trisphosphate (Ins(1,2,6)P3), inositol 3,4,5,6-tetrakisphosphate (Ins(3,4,5,6)P4), inositol 1,3,4,5,6-pentakisphosphate (Ins(1,3,4,5,6)P5), inositol 1,2,4,5,6-pentakisphosphate (Ins(1,2,4,5,6)P5) or inositol hexakisphosphate (InsP6). Involved in the auxin signaling pathway. Regulates axillary shoot branching and is required for phytate synthesis in seeds.
messages: Interacts with KIN10 and KIN11.
messages: Loss-of-function mutant atIpk2beta-1 (T-DNA insertion) is fully complemented by AtIPK2alpha in tissue but not in seeds, leading to the generation of phytate-free seeds. Increased sensitivity to 6% glucose during seedling development and decreased germination in response to the gibberellin biosynthesis inhibitor paclobutrazol (PAC) (PubMed:29216370).
messages: Nucleus
messages: Phosphorylated by KIN10.

3702:AT1G75870
gene id: 3702:AT1G75870
uniprot id: A0A178W4K3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G22640
gene id: 3702:AT2G22640
uniprot id: A0A178VTW7
uniprot id: Q94JY4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the BRK1 family.
messages: Binds SCAR1 and/or SCAR2 and/or SCAR3.
messages: Expressed in roots, root hairs, hypocotyls, cotyledons, stems, leaves, trichomes, and flowers.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: cytoskeleton

3702:AT4G22650
gene id: 3702:AT4G22650
uniprot id: Q9SUV6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Probable lipid transfer protein.

3702:AT1G19640
gene id: 3702:AT1G19640
uniprot id: Q9AR07
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily. Type-7 methyltransferase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: By wounding and methyl jasmonate treatment.
messages: Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses.
messages: Cytoplasm
messages: Expressed in rosettes, cauline leaves and developing flowers but not in young seedlings.
messages: Nucleus

3702:AT1G49120
gene id: 3702:AT1G49120
uniprot id: Q9M9B2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G27045
gene id: 3702:AT1G27045
uniprot id: A0A178WF45
uniprot id: A0A1P8AT13
uniprot id: A0A1P8AT17
uniprot id: A0A1P8AT71
uniprot id: A0A7G2DWV5
uniprot id: P0CJ65
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Nucleus
messages: Predominantly expressed in flowers and siliques.
messages: Probable transcription factor.
messages: Transcription factor.

3702:AT1G68390
gene id: 3702:AT1G68390
uniprot id: Q9M9C4
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G36260
gene id: 3702:AT2G36260
uniprot id: Q8L8C0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HesB/IscA family.
messages: Binds 2 iron ions per dimer. The dimer may bind additional iron ions.
messages: Homodimer; may form tetramers and higher multimers.
messages: Involved in the assembly of mitochondrial iron-sulfur proteins. Probably involved in the binding of an intermediate of Fe/S cluster assembly (By similarity).
messages: Mitochondrion

3702:AT4G16745
gene id: 3702:AT4G16745
uniprot id: F4JMK5
uniprot id: Q8RXU2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT4G29660
gene id: 3702:AT4G29660
uniprot id: Q94K18
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G13230
gene id: 3702:AT5G13230
uniprot id: A0A178UQD2
uniprot id: Q9LYV3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Mitochondrion

3702:AT1G09415
gene id: 3702:AT1G09415
uniprot id: A0A654E8C6
uniprot id: Q9FNZ4
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NPR1-interactor family.
messages: By salicylic acid (SA) and BTH.
messages: Interacts with NPR1.
messages: Nucleus

3702:AT3G13040
gene id: 3702:AT3G13040
uniprot id: A0A178VHF6
uniprot id: Q949U2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MYB-CC family.
messages: Nucleus

3702:AT4G00040
gene id: 3702:AT4G00040
uniprot id: O81305
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Endoplasmic reticulum
messages: Homodimer.
messages: Plant type III polyketide synthases (PKSs) that catalyzes the condensation of malonyl-CoA units with various CoA ester starter molecules to generate a diverse array of natural products including long-chain alkyl alpha-pyrones.

3702:AT2G47600
gene id: 3702:AT2G47600
uniprot id: A0A5S9X7T9
uniprot id: O22252
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. MHX subfamily.
messages: Mainly expressed in the vascular cylinder.
messages: Membrane
messages: Vacuolar transporter that exchanges protons with Mg(2+), Zn(2+) and Fe(2+) ions. May control the partitioning of Mg(2+) and Zn(2+) between plant organs. Could also transport Cd(2+) in vitro.
messages: Vacuole membrane

3702:AT4G04540
gene id: 3702:AT4G04540
uniprot id: A0A1P8B476
uniprot id: A0A1P8B489
uniprot id: A0A1P8B4A2
uniprot id: Q9SYS7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT3G05270
gene id: 3702:AT3G05270
uniprot id: Q9MA92
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in preferentially xylem cells.
messages: Belongs to the FPP family.
messages: Ensures, when in complex with COG2 and FPP2/VETH2, the correct secondary cell wall (SCW) deposition pattern by recruiting exocyst components to cortical microtubules in xylem cells during secondary cell wall deposition by recruiting EXO70A1.
messages: Interacts with WPP/MAF proteins (By similarity). Binds to COG2; this interaction promotes the association between cortical microtubules and EXO70A1 (PubMed:25541219).
messages: Vesicle

3702:AT3G11760
gene id: 3702:AT3G11760
uniprot id: A0A384KMI5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G28460
gene id: 3702:AT4G28460
uniprot id: Q1PE40
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Contains 4-hydroxyproline; hydroxylated on Pro-65 and Pro-67.
messages: Endogenous secreted peptide that acts as elicitor of immune response and positive regulator of defense response. Amplifies the immune response triggered by flg22, the active epitope of bacterial flagellin. Acts as negative regulator of root growth.
messages: Expressed in guard cells, hydathodes, leaf trichomes, and vascular tissues of leaves and roots.
messages: Induced by infection with the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 and the fungal pathogen Fusarium oxysporum conglutinans strain 699. Induced by the flagellin flg22, chitin elicitor and salicylate.
messages: apoplast

3702:AT5G27420
gene id: 3702:AT5G27420
uniprot id: Q8LGA5
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase that is required for the plant C/N response during seedling growth transition. May be involved in the early steps of the plant defense signaling pathway.
messages: Hypersensitivity to C/N conditions during post-germinative growth.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: Up-regulated by chitin. Down-regulated by abscisic acid (ABA).

3702:AT2G38730
gene id: 3702:AT2G38730
uniprot id: A0A178VRN0
uniprot id: Q9ZVJ4
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: Ubiquitous.

3702:AT1G03490
gene id: 3702:AT1G03490
uniprot id: Q9LR74
names: Domain
names: Subcellular Location Annotation
messages: Nucleus
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.

3702:AT2G41710
gene id: 3702:AT2G41710
uniprot id: A0A1P8B1K7
uniprot id: F4IL00
uniprot id: Q8GWK2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G77093
gene id: 3702:AT1G77093
uniprot id: Q2V4C3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT2G37600
gene id: 3702:AT2G37600
uniprot id: A0A7G2EIC5
uniprot id: O80929
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL36 family.

3702:AT5G27980
gene id: 3702:AT5G27980
uniprot id: A0A5S9Y7S1
uniprot id: Q8GWT7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LEA type SMP family.
messages: Cytoplasm
messages: LEA proteins are late embryonic proteins abundant in higher plant seed embryos. The function of those proteins is not known.
messages: Nucleus

3702:AT3G03660
gene id: 3702:AT3G03660
uniprot id: A0A1I9LND7
uniprot id: A0A1I9LND8
uniprot id: A0A5S9X9D9
uniprot id: B3H5D3
uniprot id: Q6X7J3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WUS homeobox family.
messages: Nucleus
messages: Transcription factor which may be involved in developmental processes.

3702:AT1G26370
gene id: 3702:AT1G26370
uniprot id: F4IE66
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. PRP22 sub-subfamily.
messages: Defects in female gametophyte development.
messages: Involved in pre-mRNA splicing. Plays a role during development in processes such as meristem maintenance, leaf morphogenesis and root morphogenesis.
messages: Nucleus
messages: Widely expressed but spatially and temporally regulated during development.
messages: nucleolus

3702:AT5G40140
gene id: 3702:AT5G40140
uniprot id: Q9FL17
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT3G02060
gene id: 3702:AT3G02060
uniprot id: F4JFJ3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the helicase family.
messages: chloroplast

3702:AT1G79860
gene id: 3702:AT1G79860
uniprot id: Q9CA89
names: Activity Regulation
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in pollen grains.
messages: Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP. May be recruited by PRK2 at the plasma membrane to maintain polar Rop activity in the pollen tube and control polarized pollen tube growth.
messages: Interacts (via C-terminus) with PRK2. Interacts with PRK6 (PubMed:26961657).
messages: Phosphorylation at Ser-510 by PRK2 may release ROPGEF12 auto-inhibition, thereby activating ROPGEF12 and downstream Rop signaling.
messages: The PRONE (plant-specific Rop nucleotide exchanger) domain is responsible for the GEF activity.

3702:AT5G67230
gene id: 3702:AT5G67230
uniprot id: A0A5S9YHR5
uniprot id: Q9FH90
uniprot id: W8Q2M9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 43 family.
messages: Expressed in developing interfascicular fibers and xylem cells in stems and developing secondary xylem in roots.
messages: Golgi apparatus membrane
messages: Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.
messages: Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT4G29360
gene id: 3702:AT4G29360
uniprot id: F4JMY6
uniprot id: Q8VYE5
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: Cell membrane
messages: Contains two additional disulfide bonds.
messages: May be due to an intron retention.
messages: cell wall

3702:AT2G23800
gene id: 3702:AT2G23800
uniprot id: A0A384LH49
uniprot id: B6DVJ8
uniprot id: O04046
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Endoplasmic reticulum
messages: Heterodimeric geranyl(geranyl)-diphosphate (GPP) synthase large subunit. In vitro, the large subunit catalyzes mainly the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate while the small subunit alone is inactive. Upon association of the two subunits, the product profile is not changed.
messages: Mainly expressed in flowers.
messages: Monomer (By similarity). Part of a heterodimeric geranyl(geranyl)diphosphate synthase. Interacts with GGR.

3702:AT1G22520
gene id: 3702:AT1G22520
uniprot id: A0A178WKB7
uniprot id: F4I1E5
uniprot id: Q8LAJ9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MICOS complex subunit Mic10 family.
messages: Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
messages: Component of the mitochondrial contact site and cristae organizing system (MICOS) complex (By similarity). The MICOS complex associates with mitochondrial outer membrane proteins (By similarity). Present in a large lipid-enriched complex called mitochondrial transmembrane lipoprotein (MTL) complex made of proteins located in the two mitochondrial membranes, including the TOM complex and the core components of the MICOS complex and containing at least digalactosyldiacylglycerol (DGDG) (PubMed:26898467).
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT4G13090
gene id: 3702:AT4G13090
uniprot id: Q9SV60
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: May catalyze xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: apoplast
messages: cell wall

3702:AT4G19600
gene id: 3702:AT4G19600
uniprot id: A0A178UUL8
uniprot id: Q8GYM6
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin T subfamily.

3702:AT4G38190
gene id: 3702:AT4G38190
uniprot id: A0A384KGF9
uniprot id: Q9SZL9
uniprot id: W8PV30
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

3702:AT2G25770
gene id: 3702:AT2G25770
uniprot id: A0A178VUC0
uniprot id: O82320
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Membrane

3702:AT5G03260
gene id: 3702:AT5G03260
uniprot id: A0A654FYB0
uniprot id: Q8VZA1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Lignin degradation and detoxification of lignin-derived products.
messages: Ubiquitous and constitutive.
messages: apoplast

3702:AT3G09240
gene id: 3702:AT3G09240
uniprot id: A0A178VBH8
uniprot id: A0A1I9LLQ3
uniprot id: A0A384KK65
uniprot id: Q9SR39
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with BRI1.
messages: Membrane
messages: Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.

3702:AT5G57620
gene id: 3702:AT5G57620
uniprot id: Q9FKL2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Directly up-regulated by SCARECROW (SCR), as part of the differentiation program controlled by SHORT-ROOT (SHR).
messages: Expressed in leaves, roots (endodermis-specific) and seedlings.
messages: In myb36-1, myb36-2 and myb36-4, impaired Casparian strips formation replaced by ectopic lignin-like material in the corners of endodermal cells, associated with reduced expression of several endodermis-specific genes and abnormal CASP1 localization in the plasma membrane (PubMed:26124109, PubMed:26371322). Multiple changes to leaf ionome, including elevated concentrations of sodium, magnesium, and zinc and decreased calcium, manganese, and iron. Longer root hairs (PubMed:26124109). Delayed and defective barrier (Casparian strips) formation as well as extra cell divisions in the meristem in roots (PubMed:26371322).
messages: In roots, expressed in endodermal cells from the late elongation zones to the differentiation zone and, to a lower extent, in endodermal cells of the meristematic zone.
messages: Nucleus
messages: Transcription factors that activates genes required for endodermal differentiation but represses genes involved in proliferative divisions, thus regulating the transition from proliferation to differentiation in root endodermis (PubMed:26371322). Required for Casparian strip formation by positively regulating the expression of the Casparian strip genes CASP1, PER64 and ESB1 and other endodermis-specific genes, thus triggering correct localized lignin biosynthesis in root endodermis and subsequently regulating global ion homeostasis (PubMed:26124109, PubMed:26371322).

3702:AT2G27920
gene id: 3702:AT2G27920
uniprot id: A8MR86
uniprot id: Q67Y83
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in seedlings, roots, flowers and siliques.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT4G33000
gene id: 3702:AT4G33000
uniprot id: A0A178UX95
uniprot id: A0A178UYF3
uniprot id: A0A1P8B704
uniprot id: A0A1P8B705
uniprot id: B3H7L8
uniprot id: M5BEI3
uniprot id: Q7FRS8
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
messages: Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Mediates salt tolerance, but only when phosphorylated. Competes with CIPK23 for a direct binding to AKT1, negatively regulating its activity via a protein kinase-independent mechanism.
messages: Belongs to the calcineurin regulatory subunit family.
messages: Cell membrane
messages: Endosome
messages: Expressed in shoots, leaves, stems, flowers and siliques. Barely detected in roots.
messages: Homodimer (By similarity). Interacts with CIPK24 and AKT1.
messages: Homodimer. Interacts with CIPK.
messages: May be due to a competing donor splice site.
messages: Membrane
messages: No visible phenotype when grown under normal conditions but hypersensitivity to salt stress.
messages: Not induced by abiotic stresses.
messages: Phosphorylated by CIPK24. The level of phosphorylation is enhanced by CIPK24-CBL10 interaction. The phosphorylation is induced by salt stress and limited to membrane-bound CBL10.
messages: The N-terminal 40 amino acids are necessary and sufficient for vacuolar and endosomal targeting.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuole membrane

3702:AT3G46510
gene id: 3702:AT3G46510
uniprot id: Q9SNC6
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Binds to SD11, SD16, SD17, SD18, SD113, SD129 and SD25.
messages: Cytoplasm
messages: Functions as an E3 ubiquitin ligase.
messages: Nucleus
messages: Phosphorylated by SD1-6 and SD1-7.

3702:AT1G65220
gene id: 3702:AT1G65220
uniprot id: A0A178WBU9
uniprot id: Q93ZY6
names: Caution
names: Similarity
messages: Belongs to the BZW family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G37890
gene id: 3702:AT2G37890
uniprot id: A0A178VTK8
uniprot id: Q8L7R0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT5G46700
gene id: 3702:AT5G46700
uniprot id: Q9FIQ5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 'Ekeko' is derived from Inca language (quechua) for small and hunchbacked fortune god.
messages: Belongs to the tetraspanin (TM4SF) family.
messages: Expressed in seedlings, roots, leaves, stems, apex, siliques and flowers. Present in ovules, prominently in nucellus and integuments.
messages: Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization, as well as cell differentiation. Regulates shoot apical meristem (SAM) organization in the peripheral zone. Required for initial meristematic divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis. Together with WIH peptides, promotes megasporogenesis.
messages: Membrane
messages: Severe dwarfism combined with twisted and malformed organs, and sterility. Loss of initial meristematic divisions in the epidermal/lateral root cap. Defection in basipetal transport of auxin (IAA) leading to several development aberrations.
messages: Strongly expressed in all types of meristems, including the shoot apical meristem (SAM) and lateral organ primordia. Also detected in the lamina of the cotyledons, especially in the mesophyll and vascular bundles. In leaf primorida preferentially present in vascular strands and at the distal tip of the leaflet. In the floral meristem, first detected in flanking sepal primordia, and later expressed in stamens and carpels in flowers.

3702:AT5G60890
gene id: 3702:AT5G60890
uniprot id: O64399
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Can form complexes with MYC2, MYC3 or MYC4.
messages: Expressed in trichomes.
messages: No visible phenotype. Reduced indolic glucosinolate levels in adult leaves and loss of responses to brassinosteroids.
messages: Nucleus
messages: Transcription factor involved in tryptophan gene activation and in indole-3-acetic acid (IAA) and indolic glucosinolates (IG) biosynthesis. Acts as a direct transcriptional activator of both Trp synthesis genes and Trp secondary metabolism genes.
messages: Up-regulated by herbivory.

3702:AT2G19740
gene id: 3702:AT2G19740
uniprot id: A0A178VRI1
uniprot id: Q9SLL7
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL31 family.

3702:AT1G19170
gene id: 3702:AT1G19170
uniprot id: A0A178W484
uniprot id: F4IE17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G43940
gene id: 3702:AT5G43940
uniprot id: A0A178URC5
uniprot id: F4K7D6
uniprot id: Q96533
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Down-regulated by wounding and activated by salicylic acid (SA).
messages: Homodimer.
messages: Plays a central role in formaldehyde detoxification.
messages: Ubiquitous.

3702:AT4G18290
gene id: 3702:AT4G18290
uniprot id: A0A1P8B8U1
uniprot id: A0A654FQH6
uniprot id: Q38849
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the potassium channel family. Plant (TC 1.A.1.4) subfamily.
messages: Expressed in guard cells of hypocotyls, stems leaves and petioles. Detected also in the phloem of minor veins and in flower at a lower level.
messages: Highly selective inward-rectifying potassium channel. This voltage-dependent channel could mediate long-term potassium influx into guard cells leading to stomatal opening. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. The channel activity is enhanced upon external acidification.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Potassium channel.
messages: The KHA domain (rich in hydrophobic and acidic residues) present in the C-terminal part is likely to be important for tetramerization.
messages: The potassium channel is composed of a homo- or heterotetrameric complex of pore-forming subunits.
messages: The potassium channel is probably composed of a homo- or heterotetrameric complex of pore-forming subunits. May interact with KAT1 (Probable). Interacts with SLAC1 (PubMed:27002025).
messages: The segment S4 is probably the voltage-sensor and is characterized by a series of positively charged amino acids. The pore-forming region H5 is enclosed by the transmembrane segments S5 and S6 in the Shaker-type (1P/6TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity.

3702:AT3G14930
gene id: 3702:AT3G14930
uniprot id: Q93ZB6
names: Function
names: Induction
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the uroporphyrinogen decarboxylase family.
messages: Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
messages: Homodimer.
messages: May be due to a competing acceptor splice site.
messages: Sequencing errors.
messages: Up-regulated by light. Not regulated by circadian rhythm.
messages: chloroplast

3702:AT3G07160
gene id: 3702:AT3G07160
uniprot id: A0A178V7F9
uniprot id: A0A384KXN3
uniprot id: Q9SFU6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 48 family.
messages: Cell membrane
messages: Expressed throughout pollen development with a peak at bicellular pollen stage.
messages: Involved in sporophytic and gametophytic development. Required for normal plant development. During pollen formation, required for the entry of microspores into mitosis and microspore symmetric division. May be required for correct temporal and spatial control of callose deposition during pollen mitosis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.
messages: Membrane
messages: Plants develop deformed or collapsed and inviable pollen grains.

3702:AT3G02360
gene id: 3702:AT3G02360
uniprot id: A0A178VK18
uniprot id: Q9FWA3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 6-phosphogluconate dehydrogenase family.
messages: Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (PubMed:26941195). Required for guided growth of the male gametophytes and interaction between the pollen tube and the ovule (PubMed:26941195).
messages: Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
messages: Embryonic lethality when homozygous (PubMed:26941195). Defects in pollen tube growth (PubMed:26941195).
messages: Forms homodimer (PubMed:26941195, PubMed:27366940). Forms heterodimers with PGD1 or PGD3 (PubMed:27366940).
messages: Homodimer.
messages: Peroxisome
messages: cytosol

3702:AT2G39670
gene id: 3702:AT2G39670
uniprot id: A0A178W0C3
uniprot id: F4IVY6
uniprot id: O48815
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT3G10530
gene id: 3702:AT3G10530
uniprot id: A0A384LBG6
uniprot id: Q9LPP3
names: Subcellular Location Annotation
messages: nucleolus

3702:AT5G42480
gene id: 3702:AT5G42480
uniprot id: Q9FIG9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the plastid division machinery consisting in a binary fission accomplished by the simultaneous constriction of the FtsZ ring on the stromal side of the inner envelope membrane, and the ARC5 ring on the cytosolic side of the outer envelope membrane (PubMed:28248291, PubMed:29466386). Involved in the initiation of proplastid and plastid division (including chloroplasts, statoliths and leukoplasts) (PubMed:29466386). Promotes the assembly and/or stabilization of the plastid-dividing FtsZ ring, functioning as an antagonistic regulator of FtsZ dynamics against CDP1 and facilitating MCD1 positioning to membrane tethered FtsZ filaments to form the chloroplast Z-Ring; inhibits GDP-induced disassembly of FTSZ2 but enables ARC3 binding to FTSZ2-1 (PubMed:29466386, PubMed:29967285, PubMed:29769312, PubMed:29138260). Relays plastid division site position between stroma and outer surface via interactions with the stromal FtsZ ring and the outer membrane PDV2 that recruits cytoplasmic ARC5 ring (PubMed:28248291). Required for plastid equatorial positioning of PDV2 and ARC5. May contribute to gravitropism in stems and hypocotyls. Seems to influence stromule (stroma-filled tubular extensions of the plastid envelope membrane) length and frequency.
messages: Defective in proplastid and plastid division, with only one or two grossly enlarged plastids per cell, sometimes exhibiting alteration in stromule length and frequency in non-green tissues (e.g. increase in the frequency of stromules in nearly all cells) and in stomatal guard cells (GCs) (PubMed:29466386). Heterogeneous chloroplasts sizes and shapes such as giant and mini-plastids in leaf epidermal pavement cells (PCs) (PubMed:29466386). Abnormal subplastidial localization of the key plastid division proteins FTSZ1 and FTSZ2 (numerous short and disorganized FtsZ filament fragments) (PubMed:29967285). Root cells statoliths, chloroplasts, and other plastids are also abnormally large. Impaired gravitropism of inflorescence stems and hypocotyls, but not of roots. Several mesophyll and stomatal guard cells contain chlorophyll-free plastids, probably missing chloroplastic DNA. Misexpression and mislocalization of ADT2 (PubMed:30252596). The double mutant mcd1 arc6 exhibits similar chloroplast defect than the single mutant arc6, including the abnormal localization of FTSZ1 to short filaments and dots within chloroplasts (PubMed:29967285). The double mutant arc6 cjd1 exhibits both phenotypes of single mutants cjd1 and arc6 including altered fatty acid profiles and heterogeneous chloroplasts sizes and shapes, respectively (PubMed:22028775).
messages: Levels decrease slightly from young developing leaves to mature ones (at protein level).
messages: Mostly expressed in young leaves.
messages: Self-interacts (PubMed:28248291, PubMed:29769312). Part of a complex made of ARC3, ARC6, FTSZ1 and FTSZ2 (PubMed:22823492). Interacts with FTSZ2-1 and FTSZ2-2 (via C-terminus), but not with FTSZ1; this interaction enables ARC3 binding to FTSZ2 (PubMed:29967285, PubMed:29769312, PubMed:29138260, PubMed:26527658). Binds to CDT1A. Interacts (via C-terminus) with PDV2 (via C-terminus) in the chloroplast intermembrane space; this interaction induces homodimerization and leads to the formation of an heterotetramer containing two ARC6 and two PDV2 subunits (PubMed:28248291). Interacts with MCD1 in the chloroplast stroma and facilitates its subsequent binding to FtsZ2-1 (PubMed:29967285). Interacts (via J domain) with CJD1 (via J-like domain) (PubMed:22028775).
messages: Slightly induced by gibberellic acid (GA).
messages: chloroplast inner membrane

3702:AT4G32520
gene id: 3702:AT4G32520
uniprot id: A0A178UTK1
uniprot id: Q94JQ3
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the interconversion of serine and glycine and directs the hydroxymethyl moiety of serine into the metabolic network of H4PteGlu(n)-bound one-carbon units.
messages: Homotetramer.
messages: Inhibited by 5-CH3-H4PteGlu1/5 and 5-HCO-H4PteGlu1/5 in vitro.
messages: Interconversion of serine and glycine.
messages: chloroplast

3702:AT1G71790
gene id: 3702:AT1G71790
uniprot id: A0A178WKY0
uniprot id: Q9M9G7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the F-actin-capping protein beta subunit family.
messages: F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (By similarity).
messages: F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
messages: Heterodimer of an alpha and a beta subunit.
messages: cytoskeleton

3702:AT2G38900
gene id: 3702:AT2G38900
uniprot id: A0A178VZC3
uniprot id: A0A654F1F3
uniprot id: F4IU00
uniprot id: Q9ZV16
names: Similarity
messages: Belongs to the protease inhibitor I13 (potato type I serine protease inhibitor) family.

3702:AT1G68090
gene id: 3702:AT1G68090
uniprot id: A0A178W290
uniprot id: A0A384L1V6
uniprot id: Q9C9X3
names: Caution
names: Domain
names: Induction
names: Similarity
names: Tissue Specificity
messages: A pair of annexin repeats may form one binding site for calcium and phospholipid.
messages: Belongs to the annexin (TC 1.A.31.1) family.
messages: Expressed mainly in roots and flowers. Lower in stems and leaves.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by cold, heat shock, dehydration and salt stresses.

3702:AT4G24400
gene id: 3702:AT4G24400
uniprot id: A0A178V2J3
uniprot id: F4JQW5
uniprot id: Q9STV4
names: Domain
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: Interacts with CBL1 and CBL9.
messages: Mostly expressed in roots, and, to a lower extent, in leaves, stems, flowers, and siliques.
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT1G51690
gene id: 3702:AT1G51690
uniprot id: A0A178WBC1
uniprot id: A0A1P8AUA0
uniprot id: A0A654EHJ3
uniprot id: F4I9M3
uniprot id: Q38821
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B family.
messages: Expressed ubiquitously.
messages: May be due to a competing donor splice site.
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (By similarity). Interacts with SIC/RON3 (PubMed:26888284).
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment.

3702:AT2G24570
gene id: 3702:AT2G24570
uniprot id: A0A7G2EEQ2
uniprot id: Q0WTF3
uniprot id: Q9SJA8
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT2G26330
gene id: 3702:AT2G26330
uniprot id: A0A5S9X1C7
uniprot id: Q42371
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Polymorphism
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Homodimer and heterodimer with ERL1 and TMM. Interacts with EPF1, EPF2, EPFL4, EPFL5 and EPFL6. Interacts with SERK1, SERK2, SERK3/BAK1 and SERK4 in a EPF2-induced manner (PubMed:26320950). Interacts with EPFL9/STOMAGEN (PubMed:26083750).
messages: In er-104 and er-105, small curly leaves and compact inflorescence with short thick siliques, increased canalization of rosette leaf number during long days.
messages: Mostly expressed in shoot apical meristems (SAM), organ primordia, flowers, siliques and young rosette leaves, and, to a lower extent, in stems and cauline leaves. Expressed in growing inflorescence stems and pedicels. Detected in epidermis, phloem and xylem.
messages: Receptor kinase that, together with ERL1 and ERL2, regulates aerial architecture, including inflorescence (e.g. shoot apical meristem-originating organ shape, elongation of the internode and pedicels, and adaxial-abaxial polarity), and stomatal patterning (e.g. density and clustering), probably by tuning cell division and expansion. Redundantly involved with ERL1 in procambial development regulation. Forms a functional ligand-receptor pair with EPF2 (AC Q8LC53) (PubMed:22241782). Modulates plant transpiration efficiency by controlling stomatal density, leaf photosynthetic capacity, epidermal cell expansion, mesophyll cell proliferation and cell-cell contact. A phloem-specific expression of ER is sufficient for proper inflorescence architecture (PubMed:22474391). Probable major trait regulating canalization (maintenance of phenotype despite varying environment) in many aspect of the plant physiology (e.g. plant morphology, light-dependent leaves number, branch number, flowering time, phytate and mineral concentrations) by transducing microenvironmental variation into phenotypic differentiation (ecological amplifier). May maintain development integrity in heat stress conditions. Regulates cell wall composition and structure. Confers resistance to the pathogenic bacteria Ralstonia solanacearum and to the necrotrophic fungi Plectosphaerella cucumerina and Pythium irregulare, and required for callose deposition upon infection. Resistance to P.cucumerina seems cell wall-mediated. Forms a constitutive complex with TMM involved in the recognition of the stomatal regulatory peptides EPF1, EPF2 and EPFL9/STOMAGEN (PubMed:28536146).
messages: Strongly expressed in organ primordia and immature organs but weakly in mature organs. Observed in SAM at low levels during the vegetative growth with an increase at the transition to the reproductive growth phase. At the reproductive stage, localized in the young developing flowers. Expressed in inflorescence meristem and is up-regulated during flower initiation and formation of flower organs. Also found in cells that differentiate into pedicels.
messages: The cultivar Landsberg erecta (cv. Ler) derives from cv. Landsberg (cv. La-0) in which ERECTA is mutated at Ile-750 (variant er).
messages: The kinase domain is not required for ligand binding.

3702:AT5G40930
gene id: 3702:AT5G40930
uniprot id: A0A1P8BC55
uniprot id: P82805
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tom20 family.
messages: Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore.
messages: Expressed in roots, flowers, young cotyledons and leaves.
messages: Forms part of the preprotein translocase complex of the outer mitochondrial membrane (TOM complex) which consists of at least 6 different proteins (TOM5, TOM6, TOM7, TOM20, TOM22/TOM9 and TOM40) (PubMed:17981999, Ref.6). Interacts with a variety of mitochondrial precursor proteins. Interacts with AKR2A (PubMed:20215589). Component of a mitochondrial large protein complex that contains, at least, MIC60, DGS1, TOM40, TOM20 proteins, and petC/RISP (By similarity).
messages: In mammals and fungi, the transmembrane domain is located at the N-terminus while it is located at the C-terminus in plants. The overall orientation of the protein in the membrane is therefore inverted.
messages: Mitochondrion outer membrane
messages: No visible phenotype. Triple mutants tom20-2-tom20-3-tom20-4 are vible but display a slightly delayed flowering time.
messages: The N-terminus is blocked.
messages: There are four genes (TOM20-1, TOM20-2, TOM20-3 and TOM20-4) which encode mitochondrial import receptor subunits TOM20.
messages: Up-regulated after antimycin A or rotenone treatments.

3702:AT1G22950
gene id: 3702:AT1G22950
uniprot id: A0A178WMT7
uniprot id: Q3ED68
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Altered plant morphology, including epinastic (curved downward) cotyledons, hyponastic (curved up) leaves, and reduced palisade mesophyll cell size (PubMed:29915151). Reduced number of leaves at bolting and early flowering (PubMed:29915151). The double mutant seedlings icu11 and cp2 skip the vegetative phase, flower immediatly after germination and then die (PubMed:29915151).
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in roots, cotyledons, rosette leaves, cauline leaves and inflorescences.
messages: Participates in the epigenetic repression of flowering genes in association with CP2 (PubMed:29915151). Functions in the repression of several members of the MADS-box transcription factors family, including SEP3, during vegetative development via histone modification (PubMed:29915151).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleoplasm

3702:AT5G22220
gene id: 3702:AT5G22220
uniprot id: A0A178ULG8
uniprot id: Q9FV71
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Cytoplasm
messages: Expressed in a cell cycle-dependent manner. Most abundant at the G1/S transition. Lower but constant level in the following phases.
messages: Expressed in proliferating cells and several differentiated tissues. Detected in inflorescence and shoot apical meristems, cotyledonary vascular tissues, leaf primordia, young leaves, base of trichomes, central cylinder and elongation zone of roots, lateral root primordia, flowers, pistils of immature flowers and pollen grains.
messages: Heterodimer with DP proteins. Interacts (via dimerization domain) preferentially with DPA, but also with DPB. Interacts with PURA1 and retinoblastoma-related protein RBR1. Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells. Interacts with MYB3R4 only at early stages of leaves development (PubMed:26069325).
messages: Nucleus
messages: Phosphorylated.
messages: Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Involved in the control of cell-cycle progression from G1 to S phase and from G2 to M phase. Stimulates cell proliferation and delays differentiation. Represses cell enlargement and endoreduplication in auxin-free conditions.
messages: Up-regulated by light and by auxin. May be up-regulated by E2FA.

3702:AT4G34412
gene id: 3702:AT4G34412
uniprot id: A0A178USC1
uniprot id: Q6NMZ4
names: Similarity
messages: Belongs to the CGI121/TPRKB family.

3702:AT2G15390
gene id: 3702:AT2G15390
uniprot id: Q9SJP2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 37 family.
messages: Expressed in roots, stems, leaves, flowers, siliques and seedlings.
messages: Golgi stack membrane
messages: May be due to an intron retention.
messages: May be involved in cell wall biosynthesis. May act as a fucosyltransferase.

3702:AT1G56710
gene id: 3702:AT1G56710
uniprot id: A0A178WM22
uniprot id: Q9FXC1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G40340
gene id: 3702:AT5G40340
uniprot id: Q9FNE4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PDP family.
messages: Delayed flowering associated with reduced H3K27me3 level on FLC (PubMed:29314758). The triple mutant pdp1 pdp2 pdp3 has increased levels of FLC, MAF4 and MAF5 expression, but decreased expression of FT (PubMed:29314758).
messages: Interacts with DEK3 (PubMed:25387881). Binds to LHP1, MSI4/FVE and MSI5 (PubMed:29314758). Component of the PRC2 (polycomb repressive complex 2) complex which regulates histone methylation on histone H3K27 (PubMed:29314758).
messages: Nucleus
messages: Together with PDP1, PDP2 and PDP6, interacts with MSI4/FVE and MSI5 to suppress FLC, MAF4 and MAF5 expression by regulating the function of the PRC2 complex and modulating H3K27me3 level, thereby promoting flowering.

3702:AT3G60790
gene id: 3702:AT3G60790
uniprot id: Q9LZY4
names: Miscellaneous
messages: Incomplete sequence. May be due to an intron retention.

3702:AT1G74560
gene id: 3702:AT1G74560
uniprot id: A0A178WEU8
uniprot id: Q9CA59
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as histone H2A/H2B chaperone in nucleosome assembly, playing a critical role for the correct expression of genes involved in root proliferation and patterning. Required with NRP2 for the maintenance of cell proliferation and differentiation in postembryonic root growth. Involved in both intramolecular and intermolecular somatic homologous recombination.
messages: Belongs to the nucleosome assembly protein (NAP) family.
messages: Can form homomeric and heteromeric protein complexes with NRP2. Binds histones H2A and H2B and associates with chromatin in vivo.
messages: Cytoplasm
messages: Double mutant nrp1-nrp2 shows arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips resulting in a short-root phenotype (PubMed:17122067). Double mutant nrp1-nrp2 also displays hypersensitive response to DNA damage (PubMed:17122067) and impaired somatic homologous recombination (PubMed:22534127).
messages: No visible phenotype.
messages: Nucleus
messages: The acidic domain is probably involved in the interaction with histones.
messages: Ubiquitous.

3702:AT5G58600
gene id: 3702:AT5G58600
uniprot id: Q9LUZ6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Expressed in flowers, siliques, stems and leaves.
messages: Membrane
messages: Required for nonhost resistance (NHR) during plant-microbe interactions. Plants mutated in PMR5 are resistant to powdery mildew species (PubMed:15584961, PubMed:19810803). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).

3702:AT3G19280
gene id: 3702:AT3G19280
uniprot id: A0A068FIL1
uniprot id: A0A384K903
uniprot id: Q9LJK1
names: Activity Regulation
names: Caution
names: Cofactor
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 10 family.
messages: Can also use Co(2+), Ca(2+) or Ni(2+) in vitro.
messages: Glycosylation may be important for enzymatic activity.
messages: Golgi stack membrane
messages: Inhibited by Cu(2+) and Zn(2+).
messages: Involved in cell wall synthesis (Probable). Preferentially catalyzes the addition of fucose in alpha 1-3 linkage to the first GlcNAc residue next to the peptide chains in N-glycans (PubMed:11420147, PubMed:11696361, PubMed:21515584).
messages: The C-terminus (388-501) is important for catalytic activity or for enzyme stability. The N-terminus (1-89) appears to be dispensable for enzymatic activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10800
gene id: 3702:AT1G10800
uniprot id: A0A384LHB6
uniprot id: Q9SAC3
uniprot id: Q9SGX2
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G24640
gene id: 3702:AT2G24640
uniprot id: C0Z3D8
uniprot id: Q9SJA1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C19 family.
messages: Membrane
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).

3702:AT1G19090
gene id: 3702:AT1G19090
uniprot id: Q9LMB9
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Expressed in the whole plant at low levels.
messages: Membrane

3702:AT1G14790
gene id: 3702:AT1G14790
uniprot id: A0A178WKG4
uniprot id: Q9LQV2
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: Belongs to the RdRP family.
messages: By salicylic acid (SA) and infection by a crucifer-infecting tobamovirus (TMV-cg).
messages: Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs).
messages: RNA-dependent direct polymerase involved in antiviral silencing. Required for the production of some small RNAs (mainly 21 and some 22 nucleotides) derived from the crucifer-infecting tobamovirus (TMV-cg). Required for turnip mosaic virus (TuMV) silencing and accumulation of viral siRNAs. Involved in cucumber mosaic virus (CMV) silencing. Required for the biogenesis of viral secondary siRNAs, process that follows the production of primary siRNAs derived from viral RNA replication. Specifically targets the positive-strand of the 3 RNA genomes of CMV and preferentially amplifies the 5'-terminal siRNAs of each viral genomic RNA. Not involved in the production of siRNAs derived from a single-stranded 336-nucleotide satellite RNA of CMV.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Upon viral infection, increased levels of TMV-cg, tobacco rattle virus (TRV) and CMV genomic viral RNAs. Reduced levels of TMV-cg-derived small RNAs and CMV-derived siRNAs.

3702:AT1G02850
gene id: 3702:AT1G02850
uniprot id: A0A178W6X9
uniprot id: A0A2H1ZE91
uniprot id: A0A654E681
uniprot id: B3H5Q1
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT4G08740
gene id: 3702:AT4G08740
uniprot id: A0A178UZ50
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G42850
gene id: 3702:AT2G42850
uniprot id: A0A178VUF2
uniprot id: Q9SJH2
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT2G15090
gene id: 3702:AT2G15090
uniprot id: A0A5S9WY70
uniprot id: Q4V3C9
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Endoplasmic reticulum membrane
messages: Expressed in leaves and seedlings.
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Down-regulated by darkness, low temperature, drought and osmotic stress (PubMed:18465198).

3702:AT1G24520
gene id: 3702:AT1G24520
uniprot id: Q9FYL2
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated in the tapetal cells in early anther development and continues to be expressed until tapetal dissolution.
messages: Expressed in mature pollen grains, developing microspores and tapetal cells.
messages: Major pollen protein required for pollen fertility and development. Active in both diploid tapetum and haploid microspores.
messages: Membrane

3702:AT4G25900
gene id: 3702:AT4G25900
uniprot id: Q940G5
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

3702:AT4G34750
gene id: 3702:AT4G34750
uniprot id: A0A178UZ62
uniprot id: O65694
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G52230
gene id: 3702:AT5G52230
uniprot id: Q9LTJ8
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcriptional regulator.
messages: The methyl-CpG-binding domain (MBD) functions both in binding to methylated DNA and in protein interactions.

3702:AT5G28060
gene id: 3702:AT5G28060
uniprot id: Q8LC83
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS24 family.

3702:AT3G26210
gene id: 3702:AT3G26210
uniprot id: A0A5S9XFR6
uniprot id: Q9LTM0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT5G11320
gene id: 3702:AT5G11320
uniprot id: Q9LFM5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FMO family.
messages: Cytoplasm
messages: Endoplasmic reticulum membrane
messages: Expressed in leaves, stems, flowers, buds and siliques. Detected in the apical gynoecium and in the developing ovules.
messages: Expression relatively broad during early stages of embryogenesis and more restricted to apical region of the cotyledons in the mature embryo.
messages: Involved in auxin biosynthesis. Both isoforms are catalitically active. Involved during embryogenesis and seedling development. Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots.
messages: May be due to an intron retention. Expressed only in flowers. Contains a transmembrane at positions 334 - 354.
messages: No visible phenotype, due to the redundancy with the other members of the YUCCA family.
messages: Positively regulated by LEC2, by NGA3 and by STY1.

3702:AT5G13960
gene id: 3702:AT5G13960
uniprot id: A0A1P8BH29
uniprot id: A0A654G0S6
uniprot id: Q8GZB6
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although the SET domain contains the active site of enzymatic activity, both pre-SET and post-SET domains are required for methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Chromosome
messages: Expressed in leaves stems and flowers.
messages: Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression. The silencing mechanism via DNA CpNpG methylation requires the targeting of chromomethylase CMT3 to methylated histones, probably through an interaction with an HP1-like adapter. By its function, KYP is directly required for the maintenance of the DNA CpNpG and asymmetric methylation. Involved in the silencing of transposable elements.
messages: In the pre-SET domain, Cys residues bind 3 zinc ions that are arranged in a triangular cluster; some of these Cys residues contribute to the binding of two zinc ions within the cluster.
messages: Interacts with H3 histone.
messages: Mutations in the KYP/SUVH4 gene decrease the level of histone H3-K9 dimethylated, trimethylated or dimethylated in association with H3-K14Ac by factors of 4,3 and 3, respectively. The level of monomethylated H3-K9 is unchanged. Such mutations lead to a drastic decrease of cytosine methylation at CpNpG sites, causing the reactivation of endogenous retrotransposons. The KRYPTONYTE methyltransferase name was given according to its involvement in SUPERMAN gene silencing.
messages: Nucleus
messages: centromere

3702:AT1G14490
gene id: 3702:AT1G14490
uniprot id: A0A178W2K6
uniprot id: A0A1P8AR37
uniprot id: A0A5S9UE45
uniprot id: Q9M9R4
names: Caution
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT5G12150
gene id: 3702:AT5G12150
uniprot id: Q9FMP8
names: Function
messages: Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state.

3702:AT1G23240
gene id: 3702:AT1G23240
uniprot id: A0A178W1K0
uniprot id: A0A1P8AN27
uniprot id: B3H7A9
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the caleosin family.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group.
messages: Expressed in pollen coat.
messages: Homodimer.
messages: Probable calcium-binding peroxygenase. May be involved in pollination.
messages: Secreted
messages: The proline-knot motif (81-90) may be involved in targeting to lipid bodies.
messages: Transmembrane regions are predicted by sequence analysis tools, but these regions probably constitute hydrophobic domains associated to phospholipids.

3702:AT5G18400
gene id: 3702:AT5G18400
uniprot id: A0A5S9Y586
uniprot id: A0A654G2K6
uniprot id: Q8L7Z3
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the anamorsin family.
messages: Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via FAD- and FMN-containing diflavin oxidoreductase TAH18/ATR3 (PubMed:23754812). Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by providing electrons for reduction during radical cofactor maturation in the catalytic small subunit (By similarity). Required for embryo development (PubMed:23754812).
messages: Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by providing electrons for reduction during radical cofactor maturation in the catalytic small subunit.
messages: Cytoplasm
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mitochondrion intermembrane space
messages: Monomer (By similarity). Interacts with ATR3 (PubMed:20406405).
messages: Monomer.
messages: The C-terminal domain binds 2 Fe-S clusters but is otherwise mostly in an intrinsically disordered conformation.
messages: The N-terminal domain has structural similarity with S-adenosyl-L-methionine-dependent methyltransferases, but does not bind S-adenosyl-L-methionine. It is required for correct assembly of the 2 Fe-S clusters.
messages: The twin Cx2C motifs are involved in the recognition by the mitochondrial MIA40-ERV1 disulfide relay system. The formation of 2 disulfide bonds in the Cx2C motifs through dithiol/disulfide exchange reactions effectively traps the protein in the mitochondrial intermembrane space.

3702:AT3G22440
gene id: 3702:AT3G22440
uniprot id: A0A178V8B2
uniprot id: Q9LUV4
names: Similarity
names: Tissue Specificity
messages: Belongs to the Frigida family.
messages: Expressed in leaves, shoot apex, flowers and during seed development.

3702:AT1G25520
gene id: 3702:AT1G25520
uniprot id: A0A178WM18
uniprot id: Q9C6M1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GDT1 family.
messages: Membrane

3702:AT2G35300
gene id: 3702:AT2G35300
uniprot id: A0A178VRF7
uniprot id: Q96273
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
messages: Belongs to the LEA type 1 family.
messages: By dehydration stress.
messages: Expressed during embryo development and in dry seed. Expression decreases significantly after seed germination.
messages: Involved dehydration tolerance. Involved in the adaptive response of vascular plants to withstand water deficit (PubMed:20668063). May possess chaperone-like activity under water deficit (PubMed:27006402). Binds to negatively charged membranes of liposomes. This binding induces partial folding of the largely unstructured LEA18 protein, vesicle aggregation, and leakage of soluble content from liposomes (PubMed:20875393).
messages: Under water deficit, the N-terminal region is necessary and sufficient for conformational transition from disordered to alpha-helix folding. This conformational transition is required for chaperone-like activity under water limitation.

3702:AT3G01340
gene id: 3702:AT3G01340
uniprot id: A0A178VCP4
uniprot id: Q9SRI1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat SEC13 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Interacts with MAG5, SEC31A and SEC31B.
messages: Required for protein transport from the endoplasmic reticulum to the Golgi apparatus.

3702:AT2G40740
gene id: 3702:AT2G40740
uniprot id: A0A1P8AZP8
uniprot id: C0SV81
uniprot id: Q4PSR2
uniprot id: Q9SHB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group III family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT4G36050
gene id: 3702:AT4G36050
uniprot id: A0A1P8B5S2
uniprot id: A0A1P8B5S6
uniprot id: A0A1P8B5S9
uniprot id: F4JNY0
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DNA repair enzymes AP/ExoA family.
messages: Belongs to the DNA repair enzymes AP/exoA family.
messages: Exhibits apurinic/apyrimidinic (AP) endonuclease activity in vitro (PubMed:25569774). By contrast, another report show that APE2 has no biochemical activity (PubMed:25228464). Unable to catalyze the conversion of 3'-phosphor-alpha,beta-unsaturated aldehyde (3'-PUA) to 3'-OH (PubMed:25228464, PubMed:25569774). Has no in vitro 3'-phosphatase activity (PubMed:25228464, PubMed:25569774). Redundant with APE1L and at least one functional allele is required for seed viability (PubMed:19172180). Has a strong non-specific affinity to DNA (PubMed:25228464).
messages: Expressed in both vegetative and reproductive organs.
messages: No visible phenotype (PubMed:19172180). Ape2 arp double mutants have no visible phenotype (PubMed:19172180). Ape1l ape2 double mutants are embryo lethal (PubMed:19172180).
messages: Nucleus
messages: Probably binds two magnesium or manganese ions per subunit.

3702:AT1G62000
gene id: 3702:AT1G62000
uniprot id: Q39168
names: Similarity
messages: Belongs to the UPF0540 family.

3702:AT5G07640
gene id: 3702:AT5G07640
uniprot id: A0A654FZ88
uniprot id: Q9FLR7
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT3G10000
gene id: 3702:AT3G10000
uniprot id: A0A384LAC6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G24950
gene id: 3702:AT5G24950
uniprot id: P58046
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G74230
gene id: 3702:AT1G74230
uniprot id: Q9C909
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GR-RBP family.
messages: Homodimer (PubMed:26578708). Interacts with MORF8/RIP1 AND RBG3/ORRM3 (PubMed:26578708). Binds to RBG2/ORRM5 (PubMed:28549172).
messages: Mitochondrion
messages: Possibly has a role in RNA transcription or processing during stress (By similarity). Binds RNAs and DNAs sequence with a preference to single-stranded nucleic acids. Displays strong affinity to poly(U) sequence (PubMed:11972043). Involved in C-to-U editing of mitochondrial RNA. Functions as major mitochondrial editing factor. Controls 44 percent of the mitochondrial editing sites (PubMed:26578708).
messages: Reduced growth rate and delayed flowering.

3702:AT5G60130
gene id: 3702:AT5G60130
uniprot id: Q9LVG1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G19485
gene id: 3702:AT1G19485
uniprot id: A0A654EBC9
uniprot id: F4HP69
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G17170
gene id: 3702:AT2G17170
uniprot id: A0A178VS77
uniprot id: Q9SIJ1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with BRI1.
messages: Membrane
messages: Serine/threonine kinase that acts as positive regulator of brassinosteroid (BR) signaling downstream of the receptor kinase BRI1.

3702:AT5G17400
gene id: 3702:AT5G17400
uniprot id: A0A178UKR2
uniprot id: Q8LB08
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ADP:ATP antiporter that catalyzes the exchange of ADP and ATP across the endoplasmic reticulum membrane.
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Catalyzes the exchange of ADP and ATP across the membrane.
messages: Dramatic growth retardation.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Monomer.
messages: The transmembrane helices are not perpendicular to the plane of the membrane, but cross the membrane at an angle. At least 2 of the odd-numbered transmembrane helices exhibit a sharp kink, due to the presence of a conserved proline residue.

3702:AT4G14360
gene id: 3702:AT4G14360
uniprot id: A0A178V5A4
uniprot id: Q93YV7
names: Caution
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Co-expressed with the galacturonosyltransferase GAUT1.
messages: Golgi apparatus membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G63855
gene id: 3702:AT1G63855
uniprot id: A0A384KKX0
uniprot id: A0A384LFY1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G44690
gene id: 3702:AT2G44690
uniprot id: A0A384LBU4
uniprot id: Q1ECR0
uniprot id: Q9XGU0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Rho family.
messages: Cytoplasm
messages: Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation.
messages: Interacts with SPK1.
messages: Membrane

3702:AT1G42990
gene id: 3702:AT1G42990
uniprot id: Q9C7S0
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: By tunicamycin, DTT and azetidine-2-carboxylate. Isoform 2 is induced by heat.
messages: Endoplasmic reticulum membrane
messages: Expressed in seedlings, rosette and cauline leaves, stems, buds, flowers, siliques, immature seeds, anthers and pollen grains.
messages: Expression and cleavage of bZIP60 in anthers observed in the absence of stress treatment, suggesting that the ER stress response functions in the normal development of active secretory cells.
messages: Interacts with BZIP28.
messages: No visible phenotype, but reduced induction of ER stress-responsive genes. Shows enhanced susceptibility to a bacterial pathogen.
messages: Nucleus
messages: Potent transcriptional activator. Induced by IRE1-1 in response to endoplasmic reticulum stress. IRE1-1 cleaves a 23-bp fragment causing a frameshift of the mRNA transcript.
messages: The C-terminal transmembrane domain is cleaved in response to ER stress and the N-terminal fragment containing the bZIP domain is sufficient for transcription activation.
messages: Transcription factor involved in the unfolded protein response (UPR). Acts during endoplasmic reticulum stress (ER) by activating unfolded protein response (UPR) target genes via direct binding to the UPR element (UPRE). Plays a role in plant immunity and abiotic stress responses.

3702:AT5G59130
gene id: 3702:AT5G59130
uniprot id: A0A1P8B9X7
uniprot id: A0A654GCZ0
uniprot id: F4KHS9
uniprot id: Q9FIG1
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: The C-terminal propeptide is autocleaved.

3702:AT2G36340
gene id: 3702:AT2G36340
uniprot id: A0A654EZF2
uniprot id: Q9SJM4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GeBP family.
messages: Expressed in the apical meristem and young leaf primordia. Detected in the vascular tissues of rosette leaves, in primary and secondary roots and at the base of flowers and siliques.
messages: Homo- and heterodimers. Interacts with GEBP, GPL1 and GPL2. Interacts with GEBP (PubMed:29192025).
messages: Nucleus
messages: Probable transcription factor. Involved in stress responses (PubMed:21875893). Plays a repressive role in cell expansion by counteracting the positive role of CPR5 in this process, but does not regulate cell proliferation or endoreduplication (PubMed:21875893).

3702:AT1G61630
gene id: 3702:AT1G61630
uniprot id: Q944P0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.
messages: Cell membrane
messages: Expressed in leaves and flowers.
messages: Nucleoside transporter that can mediate uptake of adenosine, uridine, guanosine or cytidine when expressed in a heterologous system (yeast).

3702:AT5G44080
gene id: 3702:AT5G44080
uniprot id: Q9FNB9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G01570
gene id: 3702:AT1G01570
uniprot id: A0A384KHB2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G33500
gene id: 3702:AT4G33500
uniprot id: A0A178UZ81
uniprot id: Q93V88
names: Caution
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G65330
gene id: 3702:AT5G65330
uniprot id: A0A654GEE0
uniprot id: Q9FKQ5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G30020
gene id: 3702:AT2G30020
uniprot id: A0A5S9X2J0
uniprot id: F6LPR5
uniprot id: O80871
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: By wounding.
messages: Cytoplasm
messages: High jasmonate production and PDF1.2 expression upon wounding. Slight reduction of lesion size caused by fungal pathogen. Slight decrease of spider mite reproductive performance.
messages: Interacts with MPK4 and MPK6.
messages: Nucleus
messages: Protein phosphatase that negatively regulates defense respones. Inactivates MPK4 and MPK6 MAP kinases involved in stress and defense signaling.

3702:AT5G57390
gene id: 3702:AT5G57390
uniprot id: A0A178U889
uniprot id: A0A384LBF4
uniprot id: Q6PQQ3
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Expressed in roots, seedlings, inflorescence, and siliques. Also detected at low levels in leaves.
messages: Nucleus
messages: Present in inflorescence meristem and later in young floral mersitems. Expressed in sepal, petal, stamen and carpel primordia. In petal, progressively confined to petal margin and epidermal cells. Restricted to sporogenous tissue in the stamen and to the medial ridge of the carpel. Present in tissues that develop from this ridge, such as placenta and ovule primordia. In ovules, first expressed in distal part of the funiculus and the outer integument, before being confined to the funiculus.
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the regulation of floral organs size (PubMed:15988559).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G47790
gene id: 3702:AT2G47790
uniprot id: Q944S2
names: Disruption Phenotype
names: Function
names: Tissue Specificity
messages: Expressed in germinating seeds, rosettes leaves, flowers and siliques.
messages: Fast germination rate, fast growth rate, increased biomass accumulation and early flowering.
messages: Involved in the control of plant growth development. Acts as negative regulator of seed germination, cell division in meristematic regions, plant growth and overall biomass accumulation. May function by regulating ribosome activities and biogenesis in plant cells.

3702:AT5G45940
gene id: 3702:AT5G45940
uniprot id: Q8LET2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family. PCD1 subfamily.
messages: Coenzyme A diphosphatase which mediates the cleavage of CoA into 3',5'-ADP from CoA and 4'-phosphopantetheine. Can use malonyl-CoA, hexanoyl-CoA, lauroyl-CoA, myristoyl-CoA and palmitoyl-CoA as substrates, but not isobutyryl-CoA or propionyl-CoA.
messages: Expressed in roots, stems and leaves.
messages: Peroxisome membrane

3702:AT1G19730
gene id: 3702:AT1G19730
uniprot id: Q39239
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioredoxin family. Plant H-type subfamily.
messages: Cytoplasm
messages: Interacts with MDH1.
messages: The active site contains a CPPC motif wich differs from the conserved CGPC motif.
messages: Thiol-disulfide oxidoreductase probably involved in the redox regulation of a number of cytosolic enzymes. Possesses insulin disulfide bonds reducing activity.

3702:AT2G40160
gene id: 3702:AT2G40160
uniprot id: A0A1P8AXQ9
uniprot id: A0A654F0H2
uniprot id: Q9SEZ9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT5G05920
gene id: 3702:AT5G05920
uniprot id: A0A1P8BA27
uniprot id: A0A7G2FB90
uniprot id: F4K292
uniprot id: Q9FI94
names: Function
names: Similarity
messages: Belongs to the deoxyhypusine synthase family.
messages: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. Also able to produce homospermidine from putrescine (By similarity).

3702:AT5G65780
gene id: 3702:AT5G65780
uniprot id: A0A384KYR5
uniprot id: Q0WQT2
uniprot id: Q9FYA6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Branched-chain amino acids are synthesized in chloroplasts, whereas the degradation takes place in mitochondria.
messages: Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity).
messages: chloroplast

3702:AT3G11530
gene id: 3702:AT3G11530
uniprot id: A0A178VGR9
uniprot id: A0A384KMM9
uniprot id: A0A384LQK9
uniprot id: F4J6B8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OB-RGRP/VPS55 family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G48080
gene id: 3702:AT3G48080
uniprot id: Q9SU71
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a second functional copy of EDS1. Can mediate HRT-mediated resistance to turnip crinkle virus.
messages: Cytoplasm
messages: Ecotypes cv. Landsberg erecta and cv. Di-17 express a probably non-functional truncated protein comprising of only the first 162 amino acids. This protein is not expressed in cv. Wassilewskija.
messages: Interacts (via N-terminus) with PAD4 and SAG101 (PubMed:22072959). Part of a nuclear complex made of EDS1, PAD4 and SAG101, that can be redirected to the cytoplasm in the presence of an extranuclear form of EDS1 (PubMed:22072959). Does not interact with itself or with EDS1 (PubMed:22072959).
messages: No effect on RPS4-mediated resistance against avrRps4 bacteria, due to the redundancy with EDS1.
messages: Nucleus
messages: Up-regulated by salicylic acid or upon turnip crinkle virus infection.

3702:AT3G22510
gene id: 3702:AT3G22510
uniprot id: A0A384L1R9
uniprot id: Q6AWV8
names: Similarity
messages: Belongs to the TSR2 family.

3702:AT3G06560
gene id: 3702:AT3G06560
uniprot id: Q56XM9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the poly(A) polymerase family.
messages: Binds 2 magnesium ions. Also active with manganese.
messages: Essential protein (PubMed:19956626). Polymerase that creates the 3'-poly(A) tail of mRNA's (PubMed:15297145). Also required for the endoribonucleolytic cleavage reaction at some polyadenylation sites. May acquire specificity through interaction with a cleavage and polyadenylation specificity factor (CPSF) at its C-terminus (By similarity).
messages: Expressed in leaves (mostly in petioles and tips), cotyledon, roots (tips, vascular tissue of the radicle, and throughout the root tissue excluding the elongation zone), stems, and flowers (restricted to the stigma and the pollen in mature anthers) (PubMed:15297145, PubMed:19956626). Active in the primary and secondary root systems (PubMed:19956626).
messages: Lethal.
messages: Monomer (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits FIPS5 and CPSF30 (PubMed:18479511).
messages: Nucleus

3702:AT5G48380
gene id: 3702:AT5G48380
uniprot id: Q9ASS4
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: The protein kinase domain is predicted to be catalytically inactive. Lacks the conserved Asp active site at position 429, which is replaced by an Asn residue.

3702:AT2G20180
gene id: 3702:AT2G20180
uniprot id: A0A1P8AYE4
uniprot id: Q8GZM7
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer (Probable). Interacts with the photoactivated conformer (Pfr) of phytochromes A and B, PHYA and PHYB. Interacts also with APRR1/TOC1. Binds to RGL2, RGA and FHY3 (via N-terminus).
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Phosphorylated at Thr-10, Thr-197, Ser-202, Ser-464, Ser-465, Ser-466 and Ser-469 by CK2 (PubMed:21330376). Phosphorylated and ubiquitinated after an exposure to light (especially red and far-red), in a phytochrome-dependent manner. Modified proteins undergo a proteasome-dependent degradation. Its stability and degradation plays a central role in photomorphogenesis of seedlings.
messages: Plants overaccumulate free protochlorophyllide in the darkness and exhibit photooxidative damage (bleaching) in subsequent light, probably caused by the photosensitizing activity of this tetrapyrrole intermediate.
messages: Repressed by red (R) and far red (FR) light treatments in a phyB- and phyA-dependent manner.
messages: Transcription activator. Regulates negatively chlorophyll biosynthesis and seed germination in the dark, and lightinduced degradation of PIF1 relieves this negative regulation to promote photomorphogenesis. Binds to the G-box motif (5'-CACGTG-3') found in many light-regulated promoters. Promotes the expression of SOM, and thus modulates responses to abscisic acid (ABA) and gibberellic acid (GA).

3702:AT5G01940
gene id: 3702:AT5G01940
uniprot id: A0A178UNV7
uniprot id: A0A1P8BFD8
uniprot id: A0A384L4R3
names: Caution
names: Similarity
messages: Belongs to the eIF-2-beta/eIF-5 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G36130
gene id: 3702:AT5G36130
uniprot id: A0A140JWM8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: Possesses triterpene oxidizing activity. Catalyzes the C28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Catalyzes the C28 carboxylation of alpha- and beta-amyrin. Possesses 22alpha-hydroxylation activity against alpha- and beta-amaryn.

3702:AT4G32700
gene id: 3702:AT4G32700
uniprot id: Q588V7
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: 'Tebichi' means the 'cloven hoof of a pig' in the regional dialect of the southernmost area of Japan.
messages: Belongs to the helicase family.
messages: Morphological defects including short roots, abnormal phyllotaxy with defects in adaxial-abaxial polarity of leaves, highly serrated and asymmetric leaves, and fasciation, as well as defective patterns of cell division and differentiation in meristems and during embryogenesis. Constitutively activated DNA damage responses associated with a defect in G2/M cell cycle progression, but no activation of transcriptionally silenced genes. Hypersensitive to DNA-damaging agents such as the DNA cross-linking agent mitomycin C (MMC) and the DNA-alkylating agent methyl-methane sulfonate (MMS). Reduced frequency of intrachromosomal homologous recombination.
messages: Mostly expressed in flower buds and flowers, and, to a lower extent, in leaves, stems, seedlings, roots and siliques.
messages: Required for regulated cell division and differentiation in meristems and embryos, thus modulating adaxial-abaxial polarity. Regulates the progression of cell cycle and DNA replication (e.g. G2/M progression and intrachromosomal recombination) and the expression of genes during development, especially genes nearby the Helitron transposons.

3702:AT2G39480
gene id: 3702:AT2G39480
uniprot id: Q8LPT1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT3G04170
gene id: 3702:AT3G04170
uniprot id: Q9M8X3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT2G24710
gene id: 3702:AT2G24710
uniprot id: A0A1P8B2P3
uniprot id: A0A1P8B2P4
uniprot id: Q9SHV2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane

3702:AT5G62260
gene id: 3702:AT5G62260
uniprot id: A0A178UMD3
uniprot id: A0A1P8BGC9
uniprot id: Q9LVB0
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT1G01820
gene id: 3702:AT1G01820
uniprot id: A0A178W4K0
uniprot id: Q9LQ73
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-11 family.
messages: Can complement the yeast pex11 null mutant.
messages: Expressed in roots and developing siliques.
messages: Homooligomer. Interacts with ARC5 and FIS1B on peroxisomes.
messages: Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.
messages: Peroxisome membrane
messages: Up-regulated during senescence.

3702:AT1G65150
gene id: 3702:AT1G65150
uniprot id: A0A178WJD9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G04310
gene id: 3702:AT1G04310
uniprot id: A0A178WDB1
uniprot id: P93825
names: Caution
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated predominantly on Ser residues.
messages: Belongs to the ethylene receptor family.
messages: Binds 1 copper ion per dimer.
messages: By ethylene.
messages: Endoplasmic reticulum membrane
messages: Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling.
messages: Expressed in etiolated seedlings, leaves, roots and stems. Highly expressed in flowers, stamens, pollen cells, tapetum cells, carpels and ovules.
messages: Heteromer with ETR1.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G25250
gene id: 3702:AT4G25250
uniprot id: A0A178V195
uniprot id: Q9SB38
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Expressed in outer cell layer of roots, particularly in the root-hair zone (PubMed:25826258). Expressed in roots and siliques (PubMed:28034952).
messages: Pectin methylesterase (PME) inhibitor that can target the root-expressed PME17, regulate de-methylesterification of pectins in roots and affects root growth.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast
messages: developmentally up-regulated in roots during growth acceleration of dark-grown hypocotyls.

3702:AT1G69530
gene id: 3702:AT1G69530
uniprot id: A0A178W4B1
uniprot id: B3H5D9
uniprot id: C0Z241
uniprot id: F4I266
uniprot id: Q9C554
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Expressed in stomatal guard cells and very young vascular bundles throughout the plant.
messages: Membrane
messages: cell wall

3702:AT5G28850
gene id: 3702:AT5G28850
uniprot id: Q5QIT3
names: Disruption Phenotype
names: Function
names: Subunit
messages: No visible phenotype.
messages: PP2A consists of a common heterodimeric core enzyme, composed of a 36 kDa catalytic subunit (subunit C) and a 65 kDa constant regulatory subunit (PR65 or subunit A), that associates with a variety of regulatory subunits. Proteins that associate with the core dimer include three families of regulatory subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) and cell signaling molecules. Interacts with HMGR1L and HMGR1S (via N-terminus), but not with HMG2. Interacts with PP2AA1.
messages: Regulatory subunit of type 2A protein phosphatase. Involved in post-transcriptional regulation of HMGR but not in root growth regulation in response to salt.

3702:AT4G24250
gene id: 3702:AT4G24250
uniprot id: A0A1P8B5M1
uniprot id: A0A384KAF8
uniprot id: Q56XQ5
uniprot id: Q94KB2
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT2G17890
gene id: 3702:AT2G17890
uniprot id: Q7XJR9
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Cell membrane
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Nucleus
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (374-404) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT3G03710
gene id: 3702:AT3G03710
uniprot id: A0A654F3U1
uniprot id: Q8GZQ3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polyribonucleotide nucleotidyltransferase family.
messages: Delayed greening and retarded growth.
messages: Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase. May be required for plastid ribosome assembly and non-coding RNA biogenesis and accumulation. Seems not required for efficient translation.
messages: chloroplast

3702:AT5G46920
gene id: 3702:AT5G46920
uniprot id: Q9FJR9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Associated to a large ribonucleoprotein complex in mitochondria containing group-II intron RNAs.
messages: Belongs to the plant nuclear intron maturase (nMat) family.
messages: Low germination, slow growth, and late flowering, as well as partial sterile of both male and female gametes. Small, pale and round-shaped leaves. Impaired splicing of mitochondrial group-II introns-containing COX2, NAD1 and NAD7 transcripts (PubMed:19946041). Abnormal mitochondrial mor-phology, including low-density cristae (PubMed:22429648).
messages: Mitochondrion
messages: Nuclear-encoded maturase required for splicing of group-II introns in mitochondria. Involved in the splicing of mitochondrial COX2, NAD1 and NAD7 transcripts (PubMed:19946041). Necessary for mitochondrial biogenesis during early developmental stages (PubMed:22429648).

3702:AT1G24320
gene id: 3702:AT1G24320
uniprot id: A0A1P8ARK2
uniprot id: Q84M89
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 63 family.
messages: Cleaves the distal alpha 1,2-linked glucose residue from the Glc(3)Man(9)GlcNAc(2) oligosaccharide precursor.
messages: Endoplasmic reticulum membrane

3702:AT5G15725
gene id: 3702:AT5G15725
uniprot id: F4KB79
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Golven' means irregular waves in Dutch.
messages: Belongs to the RGF family.
messages: Binds to LRR receptor-like serine/threonine-protein kinases to trigger their dimerization with SERK proteins and subsequent signaling.
messages: Expressed in roots.
messages: In roots, restricted to the root apical meristem (RAM) in a pattern positioned just above the quiescent center (QC); strongest levels are observed in the meristematic cortical cells, but also detected in the epidermis and within the vasculature (PubMed:23370719). Induced during lateral root formation after the emergence of the primordium (PubMed:23370719).
messages: Secreted
messages: Signaling peptide (root growth factor) required during root gravitropism in a PIN2-traffic dependent manner (PubMed:23370719). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (PubMed:23370719).

3702:AT4G25270
gene id: 3702:AT4G25270
uniprot id: Q9SB36
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: chloroplast

3702:AT5G07210
gene id: 3702:AT5G07210
uniprot id: A0A654FZ97
uniprot id: Q9LYP5
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARR family. Type-B subfamily.
messages: Binds the target DNA as a monomer.
messages: Mainly expressed in siliques. Also found in germinating seedlings, stems, flowers and roots, but not in rosette leaves.
messages: No visible phenotype.
messages: Nucleus
messages: Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity).
messages: Transcriptional activator that binds specific DNA sequence.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT1G79370
gene id: 3702:AT1G79370
uniprot id: A0A178W6I5
uniprot id: F4IF38
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G36740
gene id: 3702:AT4G36740
uniprot id: A0A1P8B6F4
uniprot id: A0A654FW49
uniprot id: O23208
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: By abscisic acid (ABA) and by salt stress.
messages: Expressed in roots, flowers and siliques.
messages: Nucleus
messages: Probable transcription factor.
messages: Transcription factor.

3702:AT5G19990
gene id: 3702:AT5G19990
uniprot id: A0A178UGX7
uniprot id: A0A1P8BCJ5
uniprot id: Q9C5U3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AAA ATPase family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: Nucleus
messages: The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.

3702:AT4G34560
gene id: 3702:AT4G34560
uniprot id: A0A178USS1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G31120
gene id: 3702:AT1G31120
uniprot id: A0A5S9WJH3
uniprot id: Q9SA05
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Potassium transporter.
messages: Putative potassium transporter.

3702:AT5G55710
gene id: 3702:AT5G55710
uniprot id: A0A178URN8
uniprot id: Q9FM67
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tic20 family.
messages: Expressed in leaves, siliques and roots.
messages: Expressed throughout development.
messages: Involved in protein precursor import into chloroplasts.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May be involved in protein precursor import into chloroplasts. Not redundant with TIC20-I, TIC20-II or TIC20-IV.
messages: Membrane
messages: No visible phenotype.
messages: Part of the Tic complex.
messages: chloroplast inner membrane
messages: chloroplast membrane

3702:AT2G41080
gene id: 3702:AT2G41080
uniprot id: A0A178VRX3
uniprot id: Q8S9M4
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT5G05320
gene id: 3702:AT5G05320
uniprot id: A0A5S9Y1X4
uniprot id: Q9FLC2
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the 3-hydroxybenzoate 6-hydroxylase family.
messages: Expressed in seeds, seedlings, roots, leaves, flowers, pollen and siliques.
messages: Monomer.

3702:AT2G26100
gene id: 3702:AT2G26100
uniprot id: A0A1P8B0L1
uniprot id: A0A384KC83
uniprot id: Q66GS2
uniprot id: W8PV11
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT1G12050
gene id: 3702:AT1G12050
uniprot id: Q8RW90
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the FAH family.
messages: Converts fumarylacetoacetate to acetoacetate and fumarate (PubMed:22980205). Involved in tyrosine catabolic pathway. Catalyzes the final step in the tyrosine degradation pathway (PubMed:22980205, PubMed:23743712, PubMed:27097641).
messages: Spontaneous cell death phenotype under short-day conditions.

3702:AT4G04640
gene id: 3702:AT4G04640
uniprot id: A0A178USQ7
uniprot id: Q01908
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: By light.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c (By similarity). Interacts with PAB (PubMed:25775508).
messages: Membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
messages: chloroplast thylakoid membrane

3702:AT1G55730
gene id: 3702:AT1G55730
uniprot id: B9DHD0
uniprot id: Q8L783
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/proton exchanger (CAX) subfamily.
messages: Membrane
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase (By similarity).
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.
messages: Vacuole membrane

3702:AT1G34410
gene id: 3702:AT1G34410
uniprot id: Q9C8N9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT4G23800
gene id: 3702:AT4G23800
uniprot id: Q9SUP7
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G21160
gene id: 3702:AT4G21160
uniprot id: Q9FVJ3
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in roots, leaves, flowers and siliques. Low levels of expression in seeds and stems.
messages: GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Binds phosphatidylinositol 3-monophosohate (PI-3-P) and anionic phospholipids.
messages: Golgi apparatus
messages: The C2 domain binds anionic phospholipids promiscuously in the presence of calcium while the N-terminal region (1-174) show a specific affinity for phosphatidylinositol 3-monophosohate.

3702:AT1G29670
gene id: 3702:AT1G29670
uniprot id: A0A178WMD1
uniprot id: A0A1P8ASL8
uniprot id: Q9C7N4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT4G31920
gene id: 3702:AT4G31920
uniprot id: A0A384KXN7
uniprot id: O49397
uniprot id: Q0WRZ4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARR family. Type-B subfamily.
messages: Binds the target DNA as a monomer.
messages: Detected in the whole plant. Predominantly expressed in roots and leaves.
messages: Nucleus
messages: Transcriptional activator that binds specific DNA sequence.
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT4G23430
gene id: 3702:AT4G23430
uniprot id: A2RVM0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Embryo lethal.
messages: Expressed in leaves and roots.
messages: Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.
messages: Part of the Tic complex. Interacts with TIC110.
messages: chloroplast inner membrane

3702:AT2G18130
gene id: 3702:AT2G18130
uniprot id: Q9SI18
names: Cofactor
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: By phosphate deprivation.
messages: Homodimer.
messages: Secreted
messages: Specifically expressed in flowers.

3702:AT5G61560
gene id: 3702:AT5G61560
uniprot id: A0A178U788
uniprot id: A0A1P8BBM2
uniprot id: A0A384L4A3
uniprot id: F4K3J6
uniprot id: Q9FKG5
names: Caution
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Functions as an E3 ubiquitin ligase.
messages: May be due to intron retention.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G59520
gene id: 3702:AT5G59520
uniprot id: A0A5S9YFJ0
uniprot id: Q0WSL6
uniprot id: Q9LTH9
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZIP transporter (TC 2.A.5) family.
messages: Cell membrane
messages: In roots by zinc and copper starvation.
messages: Mediates zinc uptake. May also transport copper and cadmium ions.
messages: Membrane
messages: Zinc uptake is highly pH-dependent and no uptake is seen at pH levels below 5.0. Inhibited by copper and cadmium ions.

3702:AT4G36800
gene id: 3702:AT4G36800
uniprot id: A0A178UX02
uniprot id: Q9SDY5
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin-like protein NEDD8/RUB1 from the ECR1-AXR1 E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Belongs to the ubiquitin-conjugating enzyme family. UBC12 subfamily.
messages: Expressed in shoot, root and floral meristems, and in vascular tissues of leaves.
messages: Interacts with RBX1.
messages: May be due to intron retention.
messages: Reduction in RCE1 levels leads to reduced organ length and defects in gravitropism.

3702:AT1G14760
gene id: 3702:AT1G14760
uniprot id: A0A178W828
uniprot id: F4HXU3
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Detected in inflorescences, seedlings, leaves, hydathodes, stems, roots, embryo and siliques. Expressed in a polar pattern in organ primordia and at the boundary of mature organs. Detected in the lateral domains of flower meristems, but not in the inflorescence meristem or the vegetative shoot apical meristem.
messages: Down-regulated by the AS1 repressor complex including HDA6.
messages: Interacts with KNAT1, KNAT3, KNAT4, BEL1, BLH2, BLH4 and BLH9, but not with BLH8 or the KNATM-A and KNATM-C isoforms. Isoforms KNATM-A and KNATM-C: no interactions with KNATM-B, KNOXX or BELL proteins.
messages: Nucleus
messages: The MEINOX domain (33-138) is sufficient for interactions with BELL proteins (PubMed:18398054). The BP-interacting domain (BPID, 1-32) is necessary for interactions with KNOX proteins (PubMed:18398054).
messages: Transcriptional regulator involved in leaf proximal/distal patterning. May act by sequestering BELL transcription factors.

3702:AT5G27540
gene id: 3702:AT5G27540
uniprot id: A0A178UBE1
uniprot id: Q8RXF8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial Rho GTPase family.
messages: Embryonic lethality between the apical 2-cell and the 4-terminal-cell embryo stage (PubMed:18344283, PubMed:20931334). Impaired in pollen germination and pollen tube growth (PubMed:18344283).
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Membrane
messages: Mitochondrial GTPase required to maintain proper development, morphology and intracellular distribution of mitochondria, which in turn are essential for the progress of embryonic cell division, development of haploid male and female gametes, and pollen tube growth.
messages: Mitochondrion outer membrane

3702:AT1G71720
gene id: 3702:AT1G71720
uniprot id: A0A178WGI8
uniprot id: Q9M9H4
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bacterial ribosomal protein bS1 family.
messages: By light.
messages: Interacts with CRP1 and PRFB3.
messages: Pigment defective seeds (PubMed:21139083). Virescent/yellow leaves leading to pale-green seedlings, due to reduced photosynthetic function and disruption of associated signaling networks, later associated with impaired photoautotrophy (PubMed:24053212, PubMed:27462450, PubMed:30962391). Abnormal chloroplast development with disrupted granum-stroma thylakoid membranes and disrupted photosynthetic electron flow (PubMed:27462450). Reduced accumulation of rbcL mRNA and less production of Rubisco large subunit (LSU) (PubMed:24053212). Impaired biogenesis of NDH, PSI (including PsaA, PsaB, PsaD, PsaF, PsaL, PsaG, PsaK and NdhH) and Cytb(6)f (including PetA, PetB, PetC and PetD) complexes; this phenotypes are reversed by Ycf1 overexpression (PubMed:27462450, PubMed:30962391). Inhibited induction of non-photochemical quenching (NPQ) (PubMed:27462450). Structural changes to target RNAs (PubMed:30962391).
messages: Present in leaves (at protein level) (PubMed:30962391). Confined to leaf chlorenchyma cells (PubMed:24053212).
messages: RNA-binding protein that acts as an RNA chaperone to remodel RNA structure and activates their translation (PubMed:30962391). Required for seed pigmentation (PubMed:21139083). Necessary for chloroplast development and subsequent photosynthetic electron flow, as well as for non-photochemical quenching (NPQ) (PubMed:27462450). Rubisco regulatory factor which regulates the concerted biogenesis of NDH, PSI (including PsaA, PsaB, PsaD, PsaF, PsaL, PsaG, PsaK and NdhH) and Cytb(6)f (including PetA, PetB, PetC and PetD) complexes (PubMed:24053212, PubMed:27462450, PubMed:30962391). Binds specifically to and involved in the post-transcriptional regulation of plastid-encoded mRNAs (e.g. rbcL, petA, petB, petD and Ycf1), thus modulating expression, cellular localization/compartmentalization, and photosynthetic function (PubMed:24053212, PubMed:27462450, PubMed:30962391).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G67500
gene id: 3702:AT1G67500
uniprot id: A0A1P8AMM8
uniprot id: A0A1P8AMN7
uniprot id: A0A1P8AMQ2
uniprot id: F4HTM5
uniprot id: Q766Z3
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DNA polymerase type-B family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Catalytic subunit of the error prone DNA polymerase zeta. Involved in damage-tolerance mechanisms through translesion DNA synthesis.
messages: Expressed in roots, leaves and flowers.
messages: Forms DNA polymerase zeta with REV7.
messages: No visible phenotype under normal growth conditions, but mutant plants are hypersensitive to UV-B light and gamma rays.
messages: Nucleus
messages: The CysB motif binds 1 4Fe-4S cluster and is required for the formation of polymerase complexes.

3702:AT1G10930
gene id: 3702:AT1G10930
uniprot id: Q8L840
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 3'-5' DNA helicase involved in DNA repair (PubMed:16146519, PubMed:18000056, PubMed:19096507). Required for the maintenance of genome stability by modulation of the DNA damage response and repression of crossovers. Confers resistance to genotoxic stress (PubMed:16146519, PubMed:18000056). Suppresses spontaneous homologous recombination (HR) events in somatic cells together with its partners RMI1 and TOP3A (PubMed:19096507). Contributes to the maintenance of chromosome integrity during meiosis. Involved in the removal of telomeric bridges that appear to arise during meiotic recombination. Required to resolve or dissolve MSH4-dependent telomeric associations. Does not seem required for chiasma formation (PubMed:21265901).
messages: Belongs to the helicase family. RecQ subfamily.
messages: By cold. Repressed by abscisic acid (ABA).
messages: Chromosome
messages: Enhanced sensitivity to genotoxic stress such as UV light, methyl methanesulfonate (MMS) and mitomycin C (MMC), and hyperrecombination (HR) during cell division.
messages: Expressed in roots, seedlings, young leaves, shoots, shoot apical mersitem, inflorescences, flowers, siliques and seeds.
messages: Nucleus

3702:AT4G28890
gene id: 3702:AT4G28890
uniprot id: Q5XF85
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT3G09600
gene id: 3702:AT3G09600
uniprot id: Q8RWU3
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
messages: Circadian-regulation. Peak of expression in the afternoon. Down-regulated by cold.
messages: Delay and reduction in levels of evening-phased clock gene transcripts and long circadian period.
messages: Nucleus
messages: Subject to temperature associated alternative splicing producing mainly non-productive mRNAs.
messages: Transcriptional activator of evening element (EE)-containing clock-controlled genes. Forms a negative feedback loop with APRR5. Regulates the pattern of histone H3 acetylation of the TOC1 promoter.

3702:AT2G15480
gene id: 3702:AT2G15480
uniprot id: F4IIG3
uniprot id: Q9ZQG4
uniprot id: W8Q735
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Decreased resistance to avirulent strains of P.syringae.
messages: Expressed in roots and senescent leaves.
messages: Induced by pathogen infection, H(2)O(2) and salicylic acid.
messages: Possesses quercetin 3-O-glucosyltransferase activity in vitro. Involved in stress or defense responses.

3702:AT3G04735
gene id: 3702:AT3G04735
uniprot id: A0A654FEN0
uniprot id: A8MRF9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Expressed in seeds and rosettes.
messages: Secreted

3702:AT5G43140
gene id: 3702:AT5G43140
uniprot id: A0A1P8BGJ9
uniprot id: A0JQ86
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3702:AT1G32810
gene id: 3702:AT1G32810
uniprot id: A0A178W2R4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G47790
gene id: 3702:AT5G47790
uniprot id: Q9FIK2
names: Function
names: Subunit
messages: Inhibitor of protein-phosphatase 1 (PP1). Binds to and inhibits PP1 activity.
messages: Interacts with human protein phosphatase PPP1C.

3702:AT1G68870
gene id: 3702:AT1G68870
uniprot id: A0A5S9WR10
uniprot id: Q9CA45
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SOFL plant protein family.
messages: Cytoplasm
messages: Domains SOFL-A and SOFL-B are required for function in cytokinin-mediated development.
messages: In seedlings, strong levels in the hydathode region of cotyledons as well as in the upper part of hypocotyls and weak content in the vascular tissue of cotyledons (PubMed:20011053). In developing leaves, strongly expressed in the midrib of leaf veins, but weak levels in the hydathode regions (PubMed:20011053). In developing flower buds, accumulates in pistil tips and the vascular tissue of stamens and sepals (PubMed:20011053). In mature flowers, detected in the vascular bundles between the two anther locules, the central vascular cylinders of the filaments, vascular tissues of tips of the pistils, and sepal vascular tissue (PubMed:20011053). Also present in tips and bases of developing siliques, and progressively restricted to the vascular tissues at the silique tips (PubMed:20011053).
messages: Involved in cytokinin-mediated development (PubMed:20011053, PubMed:29467189). Together with SOFL2, triggers the endogenous content of specific bioactive cytokinins derived from the biosynthetic intermediates trans-zeatin riboside monophosphate (tZRMP) and N(6)-(Delta(2)-isopentenyl)adenosine monophosphate (iPRMP) such as N-glucosides trans-zeatin 7-glucoside (tZ7G), cis-zeatin 7-glucoside (cZ7G) and N(6)-(Delta(2)-isopentenyl)adenine 7-glucoside (iP7G) (PubMed:20011053).
messages: No obvious developmental defects (PubMed:20011053). Plants missing both SOLF1 and SOLF2 have reduced endogenous cytokinin levels and accumulate lower levels of trans-zeatin riboside monophosphate (tZRMP) and N(6)-(Delta(2)-isopentenyl)adenosine monophosphate (iPRMP), biosynthetic intermediates of bioactive cytokinins as well as decreased response to exogenous cytokinin in both callus-formation and inhibition-of-hypocotyl-elongation assays (PubMed:20011053).
messages: Nucleus
messages: Predominantly expressed in the vascular tissues of seedlings, developing leaves, flowers and siliques, but barely detectable in roots and stems.

3702:AT4G02070
gene id: 3702:AT4G02070
uniprot id: A0A654FL40
uniprot id: F4JH76
uniprot id: O04716
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA mismatch repair MutS family.
messages: By UV-B.
messages: Component of the post-replicative DNA mismatch repair system (MMR).
messages: Component of the post-replicative DNA mismatch repair system (MMR). Forms the heterodimer MutS alpha (MSH2-MSH6 heterodimer) which binds to DNA mismatches thereby initiating DNA repair. MutS alpha recognizes single base mismatches and trinucleotide insertion-deletion loops (IDL) in the DNA. Is involved in a UV-B-induced DNA damage response pathway.
messages: Heterodimer consisting of MSH2-MSH6 (MutS alpha).
messages: Nucleus

3702:AT4G12500
gene id: 3702:AT4G12500
uniprot id: Q9SU33
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family. PEARLI1 subfamily.
messages: Probable lipid transfer protein (LTP). May improve freezing survival.
messages: Transient slight accumulation in response to a brief exposures to cold.
messages: cell wall

3702:AT4G27800
gene id: 3702:AT4G27800
uniprot id: P49599
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Membrane
messages: Protein phosphatase specifically required for efficient dephosphorylation of the light-harvesting complex II outer antennae (LCHII) and transition from state 2 to state 1 (PubMed:20176943, PubMed:20126264). State transition plays a central role in response to environmental changes and allows to adjust to changing light conditions via the redistribution of light excitation energy between photosystem II (PSII) and photosystem I (PSI) in a short time by relocating LHCII proteins (Probable). Mainly responsible for the dephosphorylation of Lhcb1 and Lhcb2 but not of the photosystem II core proteins (PubMed:20176943).
messages: chloroplast stroma

3702:AT3G61113
gene id: 3702:AT3G61113
uniprot id: A0A654FJQ0
uniprot id: B3H7G2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
messages: Belongs to the URM1 family.
messages: C-terminal thiocarboxylation occurs in 2 steps, it is first acyl-adenylated (-COAMP) via the hesA/moeB/thiF part of the MOCS3 homolog, then thiocarboxylated (-COSH) via the rhodanese domain of the MOCS3 homolog.
messages: C-terminal thiocarboxylation occurs in 2 steps, it is first acyl-adenylated (-COAMP) via the hesA/moeB/thiF part of the MOCS3/UBA4 homolog, then thiocarboxylated (-COSH) via the rhodanese domain of the MOCS3/UBA4 homolog.
messages: Cytoplasm

3702:AT2G25260
gene id: 3702:AT2G25260
uniprot id: Q494Q2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Glycosyltransferase involved in the O-arabinosylation of several proteins including extensins and small signaling peptides (PubMed:24036508, PubMed:26577059). Catalyzes the transfer of the initial L-arabinose to the hydroxyl group of Hyp residues (PubMed:24036508). Contributes redundantly with HPAT1 and HPAT3 to arabinosylation of EXT3 (PubMed:24036508).
messages: No visible phenotype (PubMed:24036508). Short-root-hair phenotype (PubMed:25944827). Hpat1 hpat2 double mutants have longer hypocotyls, are early flowering and show early senescence in leaves associated with a decrease in chlorophyll content (PubMed:24036508). Hpat1 hpat2 hpat3 triple mutants fail to produce detectable levels of Hyp-arabinosides, have low fertility and shorter pollen tubes (PubMed:26577059).
messages: Ubiquitous.
messages: cis-Golgi network membrane

3702:AT4G14455
gene id: 3702:AT4G14455
uniprot id: A0A5S9XSB4
uniprot id: Q147J7
uniprot id: Q94CG2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BET1 family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE associated with ER-derived vesicles (By similarity).

3702:AT4G24960
gene id: 3702:AT4G24960
uniprot id: A0A384LBZ3
uniprot id: B3H763
uniprot id: B6VAJ6
uniprot id: F4JRS2
uniprot id: Q9S760
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DP1 family.
messages: By abscisic acid (ABA), cold, drought and salt stresses.
messages: Membrane
messages: Predominantly expressed in flower buds.

3702:AT3G06035
gene id: 3702:AT3G06035
uniprot id: Q84MC0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0277 family.
messages: Cell membrane

3702:AT1G17180
gene id: 3702:AT1G17180
uniprot id: A0A178W2G2
uniprot id: Q9SHH7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT3G16565
gene id: 3702:AT3G16565
uniprot id: A0A1I9LMV6
uniprot id: A0A654F9G3
uniprot id: A0A7G2ELE4
uniprot id: A8MSD3
names: Similarity
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Alax-L subfamily.

3702:AT4G33880
gene id: 3702:AT4G33880
uniprot id: A0A5S9XYD8
uniprot id: Q84WK0
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots (PubMed:12679534). Expressed in root epidermal hair cells (PubMed:20139979).
messages: Homodimer.
messages: Induced by jasmonate (JA) treatment (PubMed:12679534, PubMed:31988260). Induced by low phosphate conditions (PubMed:29651114).
messages: Nucleus
messages: Reduced length of root hairs.
messages: Transcription factor involved in the regulation of root hair elongation (PubMed:20139979, PubMed:27452638). Does not seem to be a direct transcriptional target of RHD6 and RSL1 (PubMed:20139979). Involved in the regulation of root hair elongation in response to low phosphate (PubMed:29651114).

3702:AT1G16710
gene id: 3702:AT1G16710
uniprot id: A0A1P8ARU4
uniprot id: A0A1P8ARV7
uniprot id: A0A1P8ARV8
uniprot id: F4I4I8
uniprot id: Q9FWQ5
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus

3702:AT3G49250
gene id: 3702:AT3G49250
uniprot id: Q94A79
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of the RNA-directed DNA methylation (RdDM) machinery, probably by facilitating an RNAi-mediated epigenetic modification involving secondary siRNAs and spreading of DNA methylation, thus leading to gene silencing. Involved in the assembly of RNA polymerase V (Pol V) transcription initiation or elongation complexes at the chromatin, as a component of the DDR complex. Required for de novo DNA methylation.
messages: Homodimer. Part of the chromatin-remodeling complex (DDR complex) that contains at least DRD1, DMS3 and RDM1. Interacts with CPL1. The DDR complex recruits/activates the RNA polymerases V and acts during siRNA-directed DNA methylation (RdDM) (PubMed:18541146, PubMed:20409711, PubMed:22560611). Interacts with SUVH2 (PubMed:24465213). Binds to DMS11 and stimulates its ATPase activity (PubMed:22560611).
messages: Nucleus
messages: Very low levels of RNAi-mediated methylation and derepression of silenced genes. Impaired RNA polymerase V-chromatin associations (Pol V). The mutant idn1-1 fails to establish DNA methylation and exhibits a late-flowering phenotype.

3702:AT3G47020
gene id: 3702:AT3G47020
uniprot id: Q9SD71
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasmic granule
messages: E3 ubiquitin-protein ligase which triggers the ubiquitination and subsequent degradation of SGS3 in response to heat (PubMed:30778176). Involved in the mechanisms necessary for quick response to heat and subsequent heritable transgenerational memory of heat acclimation (global warming) such as early flowering and attenuated immunity; this process includes epigenetic regulation as well as post-transcriptional gene silencing (PTGS) (PubMed:30778176). In response to heat, HSFA2 is activated and promotes the expression of REF6 which in turn derepresses HSFA2, thus establishing an heritable feedback loop able to trigger SGIP1 and subsequent SGIP1-mediated SGS3 degradation; this prevents the biosynthesis of trans-acting siRNA (tasiRNA) and leads to the release of HTT5, which drives early flowering but attenuates immunity (PubMed:30778176).
messages: Impaired heat-induced decrease of SGS3 levels and delayed SGS3 degradation associated with abolished heat-dependent early flowering and trans-acting siRNA (tasiRNA siR255 and siR1511) accumulation (PubMed:30778176). Lost heritable transgenerational thermomemory (PubMed:30778176).
messages: Interacts with SGS3 in cytoplasmic granules.
messages: Up-regulated in heat-stressed plants and unstressed progeny in a HSFA2-dependent manner.

3702:AT1G05710
gene id: 3702:AT1G05710
uniprot id: A0A178W7Z9
uniprot id: A0A178W9Z7
uniprot id: A0A1P8AVJ7
uniprot id: A0A1P8AVK1
uniprot id: A0A384LBM5
uniprot id: Q7XJU2
names: Caution
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bHLH protein family.
messages: May be due to intron retention.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G16220
gene id: 3702:AT4G16220
uniprot id: O23469
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G61620
gene id: 3702:AT3G61620
uniprot id: Q9SP08
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aborted ovule development after the first mitosis.
messages: Belongs to the RNase PH family.
messages: Component of the RNA exosome complex (PubMed:10930416, PubMed:18160042). Interacts with RPP4 (PubMed:11809881).
messages: Cytoplasm
messages: Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is a processive phosphorolytic exonuclease and requires a single-stranded poly(A) tail on the substrate RNA for its activity. Can complement the growth defect of a yeast mutant lacking RRP41 exonuclease (PubMed:10930416). Required for normal development of female gametophytes (PubMed:18160042).
messages: Nucleus
messages: nucleolus

3702:AT2G01180
gene id: 3702:AT2G01180
uniprot id: A0A178VSS9
uniprot id: A0A1P8AYJ4
uniprot id: A0A1P8AYQ5
uniprot id: A0A654EQX5
uniprot id: Q9ZU49
names: Activity Regulation
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PA-phosphatase related phosphoesterase family.
messages: Membrane
messages: PA phosphatase activity inhibited by N-ethylmaleimide with an IC(50) value of 10 mM.
messages: Plays a general role in cellular responses to stress, may be by attenuating the signal produced by phospholipases. Exhibits both diacylglycerol pyrophosphate (DGPP) phosphatase and phosphatidate (PA) phosphatase activities. Substrate preference is diacylglycerol pyrophosphate > phosphatidate.
messages: Rapid increase in response to severe radiation stress (gamma rays or UV-B). Returns to basal level 45 min after the radiation injury. Also induced by mastoparan and by the hypersensitive response elicitor harpin. In this later case, induction is also observed in the leaves adjacent to those that were infiltrated with harpin.
messages: Sequencing errors.
messages: Strongly expressed in leaves, moderately in roots, weakly in floral hamps and flower buds, and not detected in adult flowers and seedpods.

3702:AT2G43640
gene id: 3702:AT2G43640
uniprot id: A0A384KGJ4
uniprot id: B9DGY4
uniprot id: F4IS20
uniprot id: O04421
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SRP14 family.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER) (By similarity). SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP (By similarity). The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity).
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
messages: Cytoplasm
messages: Heterodimer with SRP9; binds RNA as heterodimer (By similarity). Component of a signal recognition particle (SRP) complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9 (By similarity).
messages: Heterodimer with SRP9; binds RNA as heterodimer. Component of a signal recognition particle (SRP) complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.

3702:AT2G23985
gene id: 3702:AT2G23985
uniprot id: A0A384LC87
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G28640
gene id: 3702:AT3G28640
uniprot id: Q9LJJ1
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT5G04810
gene id: 3702:AT5G04810
uniprot id: A0A1P8BFG1
uniprot id: A0A5S9Y1E9
uniprot id: Q0WMY5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: May play a role in the plastid ribosome biogenesis.
messages: chloroplast

3702:AT1G14240
gene id: 3702:AT1G14240
uniprot id: A0A178WLZ5
uniprot id: F4HUH6
uniprot id: Q9XI62
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GDA1/CD39 NTPase family.
messages: Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates.
messages: Expressed in the initiation zone of lateral root and in the lateral root tip, the adaxial junction of lateral shoots with the stems, and in the abscission zone of flower organs. Not expressed in the rosette leaves.
messages: Membrane
messages: No visible phenotype.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G71040
gene id: 3702:AT1G71040
uniprot id: Q949X9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer. The Cu cations are bound as 3 distinct Cu centers known as type 1 or blue, type 2 or normal, and type 3 or coupled binuclear.
messages: Endoplasmic reticulum membrane
messages: Multicopper oxidase that may be involved in copper homeostasis and oxidative stress response, and that is necessary for root growth inhibition by low phosphate conditions. Functions together with LPR1 and PDR2 in a common pathway that adjusts root meristem activity to phosphate availability.
messages: No visible phenotype under normal growth conditions, but mutant plants have reduced inhibition of primary root growth in low inorganic phosphate conditions.

3702:AT3G20993
gene id: 3702:AT3G20993
uniprot id: P82770
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G49370
gene id: 3702:AT3G49370
uniprot id: A0A178V987
uniprot id: Q9SG12
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by calcium and calmodulin. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Binds calmodulin (CaM) in a calcium-dependent manner.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (408-438) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT5G13120
gene id: 3702:AT5G13120
uniprot id: A0A178UN74
uniprot id: Q9ASS6
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Binds cyclosporin A (CsA). CsA mediates some of its effects via an inhibitory action on PPIase.
messages: Down-regulated by pathogen. Up-regulated by light.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (Probable). PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Responsible, with FKBP13, for all PPIase activity observed in thylakoid lumen. Modulates the conformation of BZR1, which regulates flowering (PubMed:16765949, PubMed:23897924).
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits. Component of the NDH lumenal subcomplex, at least composed of PnsL1, PnsL2, PnsL3, PnsL4 and PnsL5 (PubMed:21785130). Interacts with AHK2 and BZR1 (PubMed:18642946, PubMed:23897924).
messages: Ubiquitous.
messages: chloroplast thylakoid membrane

3702:AT5G17190
gene id: 3702:AT5G17190
uniprot id: A0A178UF43
uniprot id: Q9FFJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.

3702:AT4G04470
gene id: 3702:AT4G04470
uniprot id: A0A384KA19
uniprot id: Q0WTY9
uniprot id: Q9ZS51
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates after seeds imbibition (at protein level).
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: May be involved in the metabolism of reactive oxygen species.
messages: Membrane
messages: Peroxisome membrane
messages: Ubiquitously expressed, higher levels in flowers and green siliques (at protein level).

3702:AT5G02060
gene id: 3702:AT5G02060
uniprot id: A0A654FXQ9
uniprot id: Q9LZM5
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Expressed in leaves, exclusively in hair cells (e.g. differentiated trichomes and immature cells).
messages: Homodimer and heterodimers.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT5G63580
gene id: 3702:AT5G63580
uniprot id: A0A178U9U9
uniprot id: A0A1P8BGI0
uniprot id: B2GVM7
names: Caution
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Could be the product of a pseudogene. Possesses a truncated Fe2OG dioxygenase domain which lacks 1 iron binding site.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G16340
gene id: 3702:AT5G16340
uniprot id: Q9FFE9
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Expressed at low levels in roots, leaves, stems and developing seeds.
messages: May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.

3702:AT4G09647
gene id: 3702:AT4G09647
uniprot id: Q2V3K1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G28306
gene id: 3702:AT1G28306
uniprot id: A0A654EDG2
uniprot id: B3H5T5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G04260
gene id: 3702:AT1G04260
uniprot id: A0A654EHB9
uniprot id: P93829
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PRA1 family.
messages: Endosome membrane
messages: Expressed in hypocotyls, roots, lateral roots, lateral root caps, columella cells, leaves, shoot apex, stems and flowers.
messages: Interacts with PRA1F2 and PRA1F3. Interacts with the cauliflower mosaic virus (CaMV) movement protein (via N-terminus).
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane

3702:AT5G42080
gene id: 3702:AT5G42080
uniprot id: A0A178UEJ4
uniprot id: F4K015
uniprot id: P42697
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
messages: Cell membrane
messages: Cytoplasm
messages: Forms homodimer and may homooligomerize and heterooligomerize to form the phragmoplastin complex (PubMed:20171176, PubMed:20231465). Interacts with AGD3/VAN3. May interact with CALS1. Binds to AHK2. Binds to SH3P2 (PubMed:28584166). Forms a complex made of SH3P2 and DRP1A and triggers its accumulation at the cell plate (PubMed:28584166). Interacts with DRP2B at the plasma membrane and in forming clathrin-coated vesicles (CCV) (PubMed:20231465). Binds to PHIP1 (PubMed:18621982).
messages: Microtubule-associated force-producing protein that is targeted to at the leading edges of the forming cell plate during cytokinesis (PubMed:18612642). Also plays a major role in plasma membrane maintenance and cell wall integrity with implications in vesicular trafficking, polar cell expansion, vascular formation, and other aspects of plant growth and development, including stigmatic papillae expansion (PubMed:18256049, PubMed:18344418). Collaboratively with DRP2B, participates in clathrin-coated vesicle formation during endocytosis (PubMed:20231465). Necessary for BOR1 polar localization in low-boron (B) conditions as well as for BOR1 endocytosis and subsequent degradation under high-concentration of boron (PubMed:27449211). Has a GTPase activity (PubMed:20171176). Required for the sterols-dependent dynamic high lipid order observed at the cell plate of dividing cells (PubMed:25234576). Together with SH3P2, converts the fused vesicles to tubular structures at the cell plate and phragmoplasts during cytokinesis (PubMed:28584166, PubMed:18256049). With DRP2B and PIP5K3, required for the precise coordination of polar ARAC3/ROP6 and ARAC4/ROP2 placement and subsequent root hair positioning during planar polarity formation in root hair-forming cells, probably by mediating the correct basal-to-planar polarity switching of D6PK into the polar, lipid-enriched domain (PubMed:27251533). Involved in endocytosis required for cellulose deposition during cell wall formation and elongation (PubMed:18256049). Interacts with plasma membrane-mimetic liposomes and induces their clustering (PubMed:20171176).
messages: Ubiquitous. Expressed in leaves (at protein level).
messages: Vascular discontinuity (PubMed:15923323, PubMed:18344418). Short and swollen roots and hypocotyls due to cellulose-deficient walls associated with increased levels of arabinose, xylose, and galactose in non-cellulosic polysaccharides (PubMed:18256049). Infertility due to the inability of stigmatic papillae to undergo rapid polar expansion prior to fertilization (PubMed:18344418). The alteration of cell wall formation correlates with abnormal phragmoplasts and division plates in dividing cells, as well as reduced cell elongation and disturbed endocytosis (PubMed:18256049). Hypersensitivity to trafficking inhibitors (e.g. brefeldin A, monensin A and latrunculin B) (PubMed:18256049). Both basal and apical shift of ARAC3/ROP6 and ARAC4/ROP2 positioning and broad lateral localization of D6PK in root hair-forming cells leading to basal and apical shift of root hair positions (PubMed:27251533).
messages: cell cortex
messages: clathrin-coated vesicle
messages: cytoskeleton
messages: phragmoplast

3702:AT4G00370
gene id: 3702:AT4G00370
uniprot id: A0A5S9XNL3
uniprot id: Q8GX78
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.
messages: Expressed in stems, developing siliques, leaf mesophyll cells and sepals of mature flowers. Not detected in roots. Detected in palisade tissue rather than spongy tissue from the leaves (PubMed:25557369).
messages: Expressed in the developing embryo at the upturned-U stage.
messages: Expressed with a circadian rhythm showing a peak during the middle of the day (under long day conditions) (PubMed:19513231). Up-regulated by light (PubMed:25557369).
messages: Inorganic phosphate and probable anion transporter (PubMed:18086223). Ascorbate transporter bridging the chloroplast envelope. Transports ascorbate from the cytosol into the chloroplast. Requires chloride ions and the presence of an electrochemical potential across the membrane for activity (PubMed:25557369).
messages: Insensitive to dehydroascorbate, p-isoascorbate, inorganic phosphate, glutamate, ATP, p-aminohippuric acid or tetraethylammonium.
messages: Membrane
messages: No visible phenotype, but decreased reduced ascorbate content in leaves and decreased xanthophyll cycle for heat dissipation of excessive energy in photosynthesis.
messages: chloroplast inner membrane

3702:AT5G62610
gene id: 3702:AT5G62610
uniprot id: A0A178UAT6
uniprot id: Q9LV17
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus

3702:AT4G03110
gene id: 3702:AT4G03110
uniprot id: Q8LFS6
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By abscisic acid (ABA).
messages: Cytoplasm
messages: Highly expressed in stems and cauline leaves, and at lower levels in siliques, flowers, roots and rosette leaves.
messages: No visible phenotype under normal growth conditions, but mutant plants show enhanced susceptibility to the pathogen Pseudomonas syringae pv. tomato DC3000.
messages: RNA-binding protein involved in the regulation of flowering time. Acts as repressor of the activity of SOC1, a transcriptional activator of flowering time. Binds to the 3'-UTR of SOC1 mRNA in the cytoplasm and participates in SOC1 mRNA decay, mediated by the distal region of the SOC1 3'-UTR (PubMed:23437850). Acts as positive regulator of salicylic acid (SA)-mediated immunity. May act on SA signaling-related genes at a post-transcriptional level (PubMed:20636102).

3702:AT1G31710
gene id: 3702:AT1G31710
uniprot id: F4IAX1
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the copper/topaquinone oxidase family.
messages: Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:23915037). Involved in putrescine catabolism in peroxisomes (PubMed:23915037).
messages: In young seedlings, expressed in hypocotyls, hypocotyl/root junctions and roots, especially in vascular tissue (e.g. xylem and metaxylem) (PubMed:31862580). Observed in shoot apex, associated with stipules (PubMed:31862580).
messages: Induced transiently by auxin (IAA) (PubMed:31862580). Induced by jasmonic acid (MeJA) (PubMed:23915037, PubMed:31862580). Accumulates during dehydration recovery and treatment with putrescine (Put) (PubMed:31862580). Repressed by abscisic acid (ABA) and salicylic acid (SA) (PubMed:31862580). Triggered by wounding (PubMed:23915037, PubMed:31862580).
messages: Mostly expressed in stems, and, at lower levels, in flowers and leaves (PubMed:23915037). Mainly detectable in stipules, hypocotyls and roots (PubMed:31862580).
messages: Peroxisome
messages: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue.

3702:AT3G29575
gene id: 3702:AT3G29575
uniprot id: Q94F39
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a negative regulator of abscisic acid (ABA) response and stress responses.
messages: Belongs to the Ninja family.
messages: Exhibits hypersensitivity to salt and slight hypersensitivity to glucose abscisic acid (ABA).
messages: Forms a heterodimer with AFP2. Interacts with ABI5/DPBF1, DPBF2, AREB3/DPBF3, EEL/DPBF4, ABF1, ABF3/DPBF5 and ABF4/AREB2.
messages: Nucleus
messages: Up-regulated by abscisic acid (ABA), glucose and salt.

3702:AT5G02820
gene id: 3702:AT5G02820
uniprot id: A0A178UQD3
uniprot id: Q9LZ03
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TOP6A family.
messages: Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
messages: Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. Involved in cell-elongation processes.
messages: Highly expressed in leaves, stems, flowers and seedlings.
messages: Homodimer. Heterotetramer of two TOP6A and two TOP6B subunits.
messages: Homodimer. Heterotetramer of two TOP6A and two TOP6B subunits. Interacts with BIN4 and RHL1.
messages: Nucleus
messages: Plants are defective in cell elongation and show a severe dwarf phenotype.

3702:AT5G61980
gene id: 3702:AT5G61980
uniprot id: A0A178ULW4
uniprot id: Q9FIT8
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Endosome
messages: Expressed in roots, but not in hypocotyls or cotyledons. Low levels detected in leaf and shoot apical meristems and in siliques.
messages: GTPase-activating protein for the ADP ribosylation factor family.
messages: Probable GTPase-activating protein (By similarity). Regulator of membrane trafficking. Required for maintaining a straight growth of root hairs.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Wavy root hair phenotype.

3702:AT2G32290
gene id: 3702:AT2G32290
uniprot id: A0A7G2EAP9
uniprot id: Q8L762
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 14 family.
messages: Cytoplasm

3702:AT5G26820
gene id: 3702:AT5G26820
uniprot id: A0A654G577
uniprot id: Q8W4E7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
messages: Down-regulated by iron deficiency.
messages: May be involved in iron transport and iron homeostasis.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but plants are resistant to several aminoglycoside antibiotics, such as kanamycin, streptomycin, gentamicin, amikacin, tobramycin and apramycin.
messages: Probable plastid transporter that may play a role in iron chelation, storage or sequestration under limiting iron conditions. In presence of exogenous antibiotics, may allow opportunistic entry of multiple aminoglycoside antibiotics into the chloroplast.
messages: Widely expressed.
messages: chloroplast envelope

3702:AT5G22660
gene id: 3702:AT5G22660
uniprot id: Q9FNJ5
names: Miscellaneous
names: Sequence Caution
messages: May be due to an intron retention.
messages: Sequencing errors.

3702:AT3G26640
gene id: 3702:AT3G26640
uniprot id: Q38960
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
messages: Circadian-regulation. Up-regulated y virus infection.
messages: Clock protein essential for the proper expression phase and period length of both the oscillator and output genes known to participate in photoperiod sensing. Required for the expression of APRR9, APRR7, and APRR5. Regulated by APRR9 and APRR7 at the transcriptional level, indicating the existence of a positive feedback loop within the circadian clock (PubMed:21357491).
messages: Constant expression level.
messages: Plants lacking LWD2 do not show obvious phenotypic alterations. Plants lacking both LWD1 and LWD2 are early flowering and this phenotype is more prominent under short-day conditions.

3702:AT2G45690
gene id: 3702:AT2G45690
uniprot id: Q8S8S1
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-16 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, siliques, seeds, cotyledons, leaves and flowers. Low expression in leaves and roots.
messages: Interacts with APEM9 (via both N- and C-terminus).
messages: Involved in the formation of peroxisomes, lipid bodies and protein bodies.
messages: Not viable shrunken seeds. Starch accumulation in mature embryos, cotyledon and hypocotyl cells. Developmental delay during early embryo morphogenesis.
messages: Peroxisome membrane
messages: The detection of an additional immunorelated polypeptide of 52 kDa suggests a post-translational modification of PEX16.
messages: The internal domain (235-279) containing two internal membrane helices and the intervening residues that include the basic cluster VRS is sufficient for targeting recombinant proteins to endoplasmic reticulum and then to peroxisomes.
messages: Travels from the cytosol to peroxisomes via the reticular and perinuclear endoplasmic reticulum (ER) and an ER-peroxisome intermediate compartment (ERPIC).
messages: Up-regulated during seed maturation.

3702:AT2G38340
gene id: 3702:AT2G38340
uniprot id: A0A5S9X539
uniprot id: O80917
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By abscisic acid (ABA) treatment (PubMed:11798174). Induced by salt, heat and drought stresses.
messages: Expressed in xylem tissues, stigma, anthers and region where sepals and petals attach the peduncle.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid-inducible transcription. Involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430).

3702:AT2G37030
gene id: 3702:AT2G37030
uniprot id: A0A178VP68
uniprot id: Q9SJK4
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G51260
gene id: 3702:AT5G51260
uniprot id: A0A178UP82
uniprot id: A0A1P8BGV2
uniprot id: Q9LU48
names: Function
messages: May function as somatic storage protein during early seedling development.

3702:AT1G51240
gene id: 3702:AT1G51240
uniprot id: Q9SYC6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G09153
gene id: 3702:AT4G09153
uniprot id: A0A178V4R9
uniprot id: P82751
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G49030
gene id: 3702:AT5G49030
uniprot id: F4K4Q2
uniprot id: Q8RXK8
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Belongs to the plant dirigent protein family.
messages: Homodimer.
messages: Lethal. In heterozygous plants, aborted ovules.
messages: Mitochondrion
messages: chloroplast

3702:AT4G05120
gene id: 3702:AT4G05120
uniprot id: A0A654FLQ1
uniprot id: Q9M0Y3
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.
messages: By nitrogen deficiency and 5-fluorouracil plus methotrexate.
messages: Cell membrane
messages: Expressed in root tips, vasculature of roots and leaves, and meristems of leaf primordia. Expressed in flowers and siliques.
messages: Membrane
messages: Nucleoside transporter that functions as a pyrimidine nucleoside carrier in all organs. Has high affinity for adenosine and uridine when expressed in a heterologous system (yeast). Mediates proton-dependent adenosine or uridine transport in Xenopus oocytes.
messages: The isolated apoplastic sap extracted from the double mutant missing both NSH3 and ENT3 lacks the ability to catalyze the conversion of inosine in hypoxanthine; this double mutant is unable to grow on medium containing inosine as sole nitrogen source, in addition plants are more sensitive to the necrotrophic fungus Botrytis cinerea BMM but are resistant to the cytotoxic adenosine analog 2-chloro-adenosine (CADO) and to 5-fluoro-uridine.

3702:AT3G18960
gene id: 3702:AT3G18960
uniprot id: A0A384L8P6
uniprot id: Q84R27
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G26900
gene id: 3702:AT2G26900
uniprot id: A0A178VXV9
uniprot id: Q1EBV7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
messages: Expressed in developing leaves.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but plants show increased sensitivity to mevastatin, an inhibitor of cytosolic isopentenyl diphosphate biosynthesis. Chloroplasts isolated from mutant plants lack sodium-dependent pyruvate uptake activity.
messages: Sodium-coupled metabolite transporter that plays a crucial role in pyruvate transport across the chloroplast envelope. Is required for sodium-coupled pyruvate import into plastids.
messages: chloroplast envelope

3702:AT5G08315
gene id: 3702:AT5G08315
uniprot id: Q2V391
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G74090
gene id: 3702:AT1G74090
uniprot id: A0A654ENT6
uniprot id: Q9C9C9
uniprot id: T1P4U2
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Polymorphism
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Expressed in roots, leaves and stems. Barely detected in siliques and flowers.
messages: In cv. C24, the substrate preference is restricted to a small number of desulfo-gulcosinolates: desulfo-6-methylthiohexyl glucosinolate > desulfo-benzyl glucosinolate > desulfo-2-phenylethyl glucosinolate (PubMed:16367753).
messages: Inhibited by phosphoadenosine 5'-phosphate (PAP).
messages: Low expression in young plants (up to 4 weeks), then slight increase in older plants.
messages: Not induced by coronatine, methyl jasmonate or high sulfate concentration.
messages: Strong differences in the kinetic behavior between the same protein from different cultivars.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of desulfo-glucosinolates (dsGSs), the final step in the biosynthesis of the glucosinolate core structure. Preferred substrate are the long-chain desulfo-glucosinolates, 7-methylthioheptyl and 8-methylthiooctyl, derived from methionine. Substrate preference is desulfo-benzyl glucosinolate > desulfo-4-methylthiobutyl glucosinolate > desulfo-6-methylthiohexyl glucosinolate > desulfo-3-methylthiopropyl glucosinolate > desulfo-indol-3-yl methyl glucosinolate > desulfo-singrin > desulfo-3-butenyl glucosinolate.

3702:AT1G74700
gene id: 3702:AT1G74700
uniprot id: Q8LGU7
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase Z family.
messages: Besides the tightly bound Zn(2+) ion, TRZ1 requires additional Ca(2+), Mn(2+) or Mg(2+) for pre-tRNA processing, while bpNPP hydrolysis occurs without addition of metal ions but is stimulated 2- to 3-fold when free Mn(2+) or Zn(2+) ions are added.
messages: Cytoplasm
messages: Homodimer.
messages: No visible phenotype when grown under standard conditions.
messages: The C-terminus (270-280) is essential for tRNA binding and processing activity.
messages: Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity (PubMed:12032089, PubMed:16118225, PubMed:18052196, PubMed:19411372). Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (PubMed:12032089, PubMed:18052196, PubMed:19411372). Can use bis-(p-nitophenyl) phosphate (bpNPP) as substrate (PubMed:18052196). Involved in the processing of small nucleolar RNAs (snoRNAs) (PubMed:19420328).

3702:AT3G23110
gene id: 3702:AT3G23110
uniprot id: Q9LS80
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT4G30690
gene id: 3702:AT4G30690
uniprot id: A0A5S9XXB9
uniprot id: F4JQD8
uniprot id: Q94B52
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-3 family.
messages: Chloroplast translation initiation factor that is essential for the coordination of leaf and chloroplast development (PubMed:27535792). IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (By similarity).
messages: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
messages: Monomer.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT3G01590
gene id: 3702:AT3G01590
uniprot id: A0A384KDP9
uniprot id: Q9SS96
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

3702:AT1G05260
gene id: 3702:AT1G05260
uniprot id: O23044
uniprot id: Q0WSR2
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Expressed in root cells.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated by cold temperatures and down-regulated by light. In response to low temperatures, transcripts accumulate in the whole etiolated seedlings but only in roots of light-grown seedlings.
messages: Vacuole

3702:AT5G10840
gene id: 3702:AT5G10840
uniprot id: A0A654G082
uniprot id: F4KIB2
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: The C-terminal KXD/E motif functions as a Golgi retention signal, certainly through the binding to the COP1 coatomer.

3702:AT2G31780
gene id: 3702:AT2G31780
uniprot id: Q9SKC2
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: May be due to a competing acceptor splice site.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT5G01360
gene id: 3702:AT5G01360
uniprot id: A0A2H1ZE45
uniprot id: Q8LED3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Golgi apparatus membrane
messages: Involved in secondary cell wall cellulose deposition. Required for normal stem development (PubMed:20388664). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Reduction in inflorescence stem elongation.

3702:AT4G27590
gene id: 3702:AT4G27590
uniprot id: A0A178V1I8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G63940
gene id: 3702:AT1G63940
uniprot id: P92947
names: Activity Regulation
names: Biotechnology
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FAD-dependent oxidoreductase family.
messages: Catalyzes the conversion of monodehydroascorbate (MDA) to ascorbate, oxidizing NADH in the process. Can also use 2,4,6-trinitrotoluene (TNT) and 1-chloro-2,4-dinitrobenzene (CDNB) as substrates, but not 1-chloro-4-nitrobenzene (CNB).
messages: Interacts in vitro with TRXy.
messages: Mitochondrion
messages: No visible phenotype, but enhanced 2,4,6-trinitrotoluene (TNT) tolerance.
messages: Redox regulation of the activity by thioredoxin TRXy1.
messages: The main mechanism for TNT toxicity in plants is the production of superoxide in the mitochondria by MDAR5 with TNT as a substrate. Inactivation of MDAR5 enhance TNT tolerance, thus enabling revegetation and remediation of explosives-contaminated sites.
messages: The use of alternative transcription starts causes dual targeting of the same mature MDAR protein to both mitochondria and chloroplast.
messages: chloroplast

3702:AT1G04210
gene id: 3702:AT1G04210
uniprot id: A0A178W6H8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G09980
gene id: 3702:AT4G09980
uniprot id: A0A178V0G2
uniprot id: Q94AI4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MT-A70-like family.
messages: Embryonic lethality: arrest at the globular stage of embryo development.
messages: Forms homodimers (PubMed:28503769). Interacts with HAKAI, MTA and VIR (PubMed:28503769). Associates with MTA, FIP37, VIR and HAKAI to form the m6A writer complex which is essential for adenosine methylation at specific mRNA sequences (PubMed:28503769).
messages: Nucleus speckle
messages: Probable non-catalytic subunit of the N6-methyltransferase complex, a multiprotein complex that mediates N6-methyladenosine (m6A) methylation at the 5'-[AG]GAC-3' consensus sites of some mRNAs (PubMed:28503769). Associates with MTA, FIP37, VIR and HAKAI to form the m6A writer complex which is essential for adenosine methylation at specific mRNA sequences (PubMed:28503769). N6-methyladenosine (m6A) plays a role in mRNA stability, processing, translation efficiency and editing (PubMed:28503769).
messages: nucleoplasm

3702:AT2G21660
gene id: 3702:AT2G21660
uniprot id: Q03250
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: ADP-ribosylated by the Pseudomonas syringae type III effector HopU1. ADP-ribosylation reduces the ability of the protein to bind RNA.
messages: Belongs to the GR-RBP family.
messages: Cytoplasm
messages: Hypersensitive responses to ABA in both seed germination and root growth. Late-flowering. Increased germination rate and seedling growth under salt and dehydration stress. Impaired mRNA export under cold stress conditions. Defective in PAMP-triggered immunity (PTI) responses and high susceptibility to P.syringae and P.carotovorum SCC1 (Pec). Increased sensitivity to tobacco rattle virus (TRV) (PubMed:31812689). The triple mutant srbp1 srbp2 srbp3 is more susceptible to TRV (PubMed:31812689).
messages: Interacts with TRN1 (PubMed:14756317). Interacts with the Pseudomonas syringae type III effector HopU1 (PubMed:22013065). Binds to small phloem-mobile single-stranded RNAs (ss-sRNA, e.g. small interfering RNA (siRNA) and microRNA (miRNA)) in the phloeme exudate, including viral-derived sRNA (vsiRNA) (PubMed:31812689).
messages: May be due to a competing donor splice site.
messages: N-terminal part of the protein is one of the crucial determinant to confer RNA chaperone activity during cold adaptation process.
messages: Nucleus
messages: Plants overexpressing RBG7 display retarded germination and affected seedling growth under salt and dehydration stress conditions, confer freezing tolerance and also possess enhanced resistance to P.syringae.
messages: Plays a role in RNA transcription or processing during stress. Binds RNAs and DNAs sequence with a preference to single-stranded nucleic acids. Displays strong affinity to poly(U) and poly(G) sequence. Involved in mRNA alternative splicing of numerous targets by modulating splice site selection. Negatively regulates the circadian oscillations of its own transcript as well as RBG8 transcript. Forms an interlocked post-transcriptional negative feedback loop with the RBG8 autoregulatory circuit. Both proteins negatively autoregulate and reciprocally crossregulate by binding to their pre-mRNAs and promoting unproductive splicing coupled to degradation via the NMD pathway. Involved in the regulation of abscisic acid and stress responses. Affects the growth and stress tolerance under high salt and dehydration stress conditions, and also confers freezing tolerance, particularly via the regulation of stomatal opening and closing in the guard cells. Exhibits RNA chaperone activity during the cold adaptation process. Involved in the export of mRNAs from the nucleus to the cytoplasm under cold stress conditions. Target of the Pseudomonas syringae type III effector HopU1, which could probably be involved in plant innate immunity. Component of the flowering autonomous pathway which promotes floral transition, at least partly by down-regulating FLC. Mediates cell-to-cell trafficking of RNA interference (RNAi) signals (small RNAs (sRNA), e.g. small interfering RNA (siRNA) and microRNA (miRNA)) which regulate growth and development, as well as responses to environmental inputs, including pathogen attack; can compromise zucchini yellow mosaic virus (ZYMV) and tobacco rattle virus (TRV) infections at the early stage (PubMed:31812689).
messages: Secreted
messages: The glycine-rich (GR) domain is necessary and sufficient for cell-to-cell movement and to interefere with zucchini yellow mosaic virus (ZYMV) infection.
messages: Ubiquitous with strong expression in guard cell.
messages: Up-regulated by cold stress and down-regulated by dehydration stress, salt stress, abscisic acid (ABA) and mannitol. Circadian regulation. Induced by hydrogen peroxide (at the protein level). Up-regulated under P.carotovorum SCC1 (Pec) infection.
messages: Wrong choice of frame.

3702:AT3G09640
gene id: 3702:AT3G09640
uniprot id: A0A178VH43
uniprot id: Q1PER6
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds one cation per subunit; probably K(+), but might also be Ca(2+).
messages: By excess light treatment, by wounding and by heat-shock stress.
messages: Cytoplasm
messages: Detected in bundle sheath cells, the photosynthetic cells that surround the phloem and xylem.
messages: Plays a key role in hydrogen peroxide removal.

3702:AT1G32170
gene id: 3702:AT1G32170
uniprot id: Q38908
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 3 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: In contrast to group 1 and group 2 endotransglucosylase/hydrolase proteins, it may not contain the ligase activity, and may catalyze endohydrolysis xyloglucan polymers only.
messages: Predominantly expressed in green siliques.
messages: apoplast
messages: cell wall

3702:AT5G59120
gene id: 3702:AT5G59120
uniprot id: A0A654GCE5
uniprot id: Q9FIG2
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: The C-terminal propeptide is autocleaved.

3702:AT1G53430
gene id: 3702:AT1G53430
uniprot id: C0LGG8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT4G21340
gene id: 3702:AT4G21340
uniprot id: A0A178V325
uniprot id: Q8VZ22
names: Caution
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Homodimer.
messages: Mature root endodermis.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G01070
gene id: 3702:AT4G01070
uniprot id: Q9M156
uniprot id: W8Q313
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Bifunctional O-glycosyltransferase and N-glycosyltransferase that can detoxify xenobiotics. Possesses high activity to metabolize the persistent pollutants 2,4,5-trichlorophenol (TCP) and 3,4-dichloroaniline (DCA). Also active on benzoates and benzoate derivatives in vitro.
messages: No visible phenotype under normal growth condition.

3702:AT4G23890
gene id: 3702:AT4G23890
uniprot id: Q9T0A4
names: Disruption Phenotype
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Arg-193 is the critical site for the high affinity binding of NDH to ferredoxin.
messages: Malfunction of the NDH complex.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (Probable). Required for the efficient operation of ferredoxin-dependent plastoquinone reduction. Forms the electron donor-binding subcomplex in association with the NDHT and NDHU subunits (PubMed:21505067, PubMed:24225949).
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits (PubMed:21785130). Component of the electron donor-binding subcomplex, at least composed of NDHS, NDHT and NDHU. Interacts with the NDH subcomplex A via the protein NDHT and NDHU (PubMed:21505067, PubMed:24225949).
messages: chloroplast thylakoid membrane

3702:AT1G03510
gene id: 3702:AT1G03510
uniprot id: Q9LR72
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT4G18050
gene id: 3702:AT4G18050
uniprot id: Q9M0M2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane

3702:AT4G14310
gene id: 3702:AT4G14310
uniprot id: F4JUQ2
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Interacts with KIN14B, CDKA-1, CKS1 and CKS2.
messages: Might be involved in division plane determination.

3702:AT4G12780
gene id: 3702:AT4G12780
uniprot id: Q9SU08
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: Cytoplasmic vesicle
messages: Endoplasmic reticulum
messages: Interacts with SH3P1.
messages: Promotes uncoating of clathrin-coated vesicles. May interact directly with clathrin.
messages: trans-Golgi network

3702:AT5G42940
gene id: 3702:AT5G42940
uniprot id: Q9FMM4
names: Function
names: Tissue Specificity
messages: Expressed in stems, flowers, green siliques, cauline leaves, seeds and roots.
messages: Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro.

3702:AT1G29820
gene id: 3702:AT1G29820
uniprot id: F4I348
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G61200
gene id: 3702:AT1G61200
uniprot id: O22726
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Nucleus
messages: Transcription factor.

3702:AT5G26140
gene id: 3702:AT5G26140
uniprot id: A0A1P8BH85
uniprot id: A0A1P8BH87
uniprot id: A0A2H1ZE76
names: Function
names: Similarity
messages: Belongs to the LOG family.
messages: Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.

3702:AT1G60040
gene id: 3702:AT1G60040
uniprot id: Q9ZUI9
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with MEE14/CBP1.
messages: Nucleus
messages: Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction.

3702:AT3G26070
gene id: 3702:AT3G26070
uniprot id: A0A5S9XFP8
uniprot id: Q9LU85
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAP/fibrillin family.
messages: Was named previously At3g26090.
messages: chloroplast thylakoid

3702:AT2G43710
gene id: 3702:AT2G43710
uniprot id: F4IS32
uniprot id: O22832
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 2 family.
messages: Binds 2 Fe(2+) ions per subunit.
messages: Binds 2 iron ions per subunit.
messages: Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons 9 and 10 of the acyl chain. Required for the activation of certain jasmonic acid (JA)-mediated responses and the repression of the salicylic acid (SA) signaling pathway.
messages: Homodimer.
messages: Increased level of stearate (18:0) and reduced level of oleic acid (18:1) in leaves. Spontaneous cell death, constitutive PR genes expression, accumulation of high levels of salicylic acid (SA), enhanced resistance to Pseudomonas syringae, Peronospora parasitica and Cucumber mosaic virus, and enhanced susceptibility to Botrytis cinerea.
messages: Introduction of a cis double bond between carbons of the acyl chain.
messages: Positively regulated by LEC1. Up-regulated by jasmomic acid (JA).
messages: Sequencing errors.
messages: Ubiquitously expressed.
messages: chloroplast stroma

3702:AT1G01980
gene id: 3702:AT1G01980
uniprot id: A0A178WKZ1
uniprot id: Q9LPC3
names: Caution
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in cell walls of etiolated hypocotyls.
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G21050
gene id: 3702:AT5G21050
uniprot id: A0A178UIL3
uniprot id: Q3E983
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAM126 family.
messages: Cell membrane
messages: Membrane
messages: cytosol

3702:AT5G15025
gene id: 3702:AT5G15025
uniprot id: A0A1P8BFD5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G53540
gene id: 3702:AT5G53540
uniprot id: A0A654GAV3
uniprot id: Q9FJC9
names: Similarity
messages: Belongs to the AAA ATPase family.

3702:AT3G53690
gene id: 3702:AT3G53690
uniprot id: A0A384KKK3
uniprot id: Q9LFF2
names: Caution
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G48610
gene id: 3702:AT1G48610
uniprot id: A0A178W6R1
uniprot id: Q94AD1
names: Caution
names: Function
names: Subcellular Location Annotation
messages: May bind DNA.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G02940
gene id: 3702:AT4G02940
uniprot id: Q9ZT92
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the alkB family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Dioxygenase that demethylates RNA by oxidative demethylation: specifically demethylates N(6)-methyladenosine (m6A) RNA, the most prevalent internal modification of messenger RNA (mRNA) in higher eukaryotes (PubMed:29180595). ALKBH10B-mediated mRNA m6A demethylation stabilizes the mRNA of the key flowering time regulators FT, SPL3 and SPL9, which are involved in the control of floral transition (PubMed:29180595).
messages: Reduced vegetative growth and late flowering.

3702:AT5G10625
gene id: 3702:AT5G10625
uniprot id: A0A178UCF2
uniprot id: Q9LXB5
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the FPF1 family.
messages: Expressed in leaves and in some parts of the flowers, mainly in the sepals.
messages: Modulates the competence to flowering of apical meristems.
messages: Overexpression of FLP2 results in shortening of the time to flowering.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G19860
gene id: 3702:AT2G19860
uniprot id: A0A178VX81
uniprot id: A8MRW9
uniprot id: P93834
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the hexokinase family.
messages: Fructose and glucose phosphorylating enzyme (PubMed:9014361). May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol (PubMed:9014361). Acts as sugar sensor which may regulate sugar-dependent gene repression or activation (PubMed:9014361). Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism (PubMed:9014361). May regulate the execution of program cell death in plant cells (PubMed:16920781).
messages: Highly expressed in siliques, at intermediate levels in roots and flowers, and at lower levels in stems, rosette and cauline leaves.
messages: Mitochondrion outer membrane
messages: Plants are overall smaller with a reduced number of flowers and siliques and display a glucose-insensitive phenotype which allows them to grow on high glucose concentration medium (>6% glucose).

3702:AT4G28005
gene id: 3702:AT4G28005
uniprot id: F4JKF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA5 subunit family.
messages: Mitochondrion inner membrane

3702:AT5G50080
gene id: 3702:AT5G50080
uniprot id: G8IQH2
uniprot id: Q70II3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G12180
gene id: 3702:AT5G12180
uniprot id: Q9FMP5
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (337-367) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT2G45850
gene id: 3702:AT2G45850
uniprot id: A0A1P8B2P7
uniprot id: A0A654F2A4
uniprot id: O80834
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT5G61280
gene id: 3702:AT5G61280
uniprot id: A0A178UCZ1
uniprot id: A0A1P8BA00
uniprot id: A0A1P8BA14
uniprot id: Q9FLK5
names: Similarity
messages: Belongs to the remorin family.

3702:AT5G62380
gene id: 3702:AT5G62380
uniprot id: Q9LVA1
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant vascular related NAC-domain protein family.
messages: By brassinosteroids (e.g. brassinolide BL), auxin (e.g. 2,4-dichlorphenoxyacetic acid 2,4-D) and cytokinin (e.g. kinetin), with a synergistic effect (PubMed:16103214). Accumulates during infection by the soilborne fungal pathogen Verticillium longisporum, especially in tissues undergoing de novo xylem formation (PubMed:23023171).
messages: Defects in metaxylem vessel formation in seedling roots.
messages: Expressed in root inner metaxylem vessels and in hypocotyl vessels (PubMed:18445131, PubMed:18952777). Present in root developing xylems (PubMed:16103214). Accumulates in the xylem but not in interfascicular fibers or pith cells in inflorescence stems. Absent from secondary xylem in roots (PubMed:18952777).
messages: Homodimer.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', and to the tracheary elements (TE) specific regulating cis-element (TERE), 5'-CTTNAAAGCNA-3', in the promoter of target genes (e.g. genes involved in secondary wall biosynthesis, cell wall modification such as xylan accumulation, and programmed cell death) (PubMed:20935069, PubMed:20952636, PubMed:20488898). Involved in xylem formation in roots and shoots, especially regulating metaxylem vessel differentiation by promoting immature xylem vessel-specific genes expression, especially genes regulating programmed cell death (PCD) and secondary wall formation in tracheary elements (TE) (PubMed:16103214, PubMed:20952636, PubMed:20488898). Can activate MYB25, MYB46, MYB58, MYB63, MYB83, MYB103, CESA4, LBD15, LBD30, ERF115, XCP1, XCP2, NAC010/SND3, KNAT7, ASL19 and ASL20 expression (PubMed:17890373, PubMed:18952777, PubMed:19088331, PubMed:19122102, PubMed:19808805, PubMed:20935069, PubMed:20952636).
messages: Up-regulated during xylem vessel element formation. Expressed preferentially in procambial cells adjacent to root meristem, especially newly proliferating cells derived presumably from pericycle.

3702:AT5G08720
gene id: 3702:AT5G08720
uniprot id: A0A178UPZ6
uniprot id: Q9C5A5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the COQ10 family.
messages: Interacts with coenzyme Q.
messages: Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.

3702:AT2G37480
gene id: 3702:AT2G37480
uniprot id: A0A178VSI5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G28610
gene id: 3702:AT2G28610
uniprot id: A0A384LML6
uniprot id: Q1PEZ2
uniprot id: Q9SIB4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the WUS homeobox family.
messages: Expressed in aerial parts of seedlings, inflorescences and flowers at low level. Expressed in a restricted number of L1 cells at the lateral regions of flower primordia.
messages: First expressed in the L1 cells of the lateral regions of a flower primordium at early stage 1, in which the lateral sepals are expected to develop at a later stage. It then rapidly decreases at the late stage 1 and disappears at stage 2. At stage 3, it reappears in all four-sepal young primordia. Not detected at the central zone of the inflorescence meristem and the floral meristem. In stages 4 through 6, when four sepals develop to enclose the flower bud, it is localized at the lateral edges of the four sepals and forms an arch of the L1 cells at the margin of sepals. Expressed in the young primordia of petals and stamens. As the petals and stamens develop, it is limited at the margins of petals and stamens in a way similar to that of sepals. In the vegetative phase, it is expressed at the lateral regions of young leaf primordia, as well as in flowers and floral organs.
messages: Nucleus
messages: Probable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in the lateral sepal axis-dependent development of flowers, probably by regulating the proliferation of L1 cells at the lateral region of flower primordia. Required for the formation of the margin cells of the first and second whorl organs.

3702:AT5G06140
gene id: 3702:AT5G06140
uniprot id: Q9FG38
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sorting nexin family.
messages: Cytoplasm
messages: Endosome membrane
messages: Homodimer. Heterodimer with SNX2A or SNX2B. Component of the retromer complex which consists of VPS29 (MAG1), VPS26 (VPS26A or VPS26B), VPS35 (VPS35A or VPS35B or VPS35C), VPS5/17 (SNX1 or SNX2A or SNX2B). Interacts with BLOS1 and BLOS2.
messages: Plays a role in vesicular protein sorting. Acts at the crossroads between the secretory and endocytic pathways. Is involved in the endosome to vacuole protein transport via its interaction with the BLOS1/2 proteins and, as component of the membrane-associated retromer complex, is also involved in endosome-to-Golgi retrograde transport. Required for the auxin-carrier protein PIN2 sorting to the lytic vacuolar pathway and the trafficking of several plasma membrane proteins. Also involved in the efficient sorting of seed storage protein globulin 12S.
messages: Prevacuolar compartment membrane
messages: Shorter primary roots, fewer secondary roots and an altered root gravitropic response. Accumulation of storage protein globulin 12S in dry seeds.
messages: The PX domain binds phosphatidylinositol 3-phosphate which is necessary for peripheral membrane localization.
messages: Ubiquitously expressed.
messages: trans-Golgi network membrane

3702:AT5G25150
gene id: 3702:AT5G25150
uniprot id: Q6S7B0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAF5 family.
messages: Component of the TFIID complexe. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa. May homodimerize to form the scaffold for the complex. Interacts with TAF4, TAF4B, TAF6B, TAF8, TAF9, TAF12B, TAF14 and TAF15B.
messages: Expressed in roots, leaves and inflorescences.
messages: Nucleus
messages: TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription.

3702:AT5G59950
gene id: 3702:AT5G59950
uniprot id: A0A178U8W3
uniprot id: Q8L773
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ALYREF family.
messages: Export adapter involved in nuclear export of spliced and unspliced mRNA.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus
messages: nucleoplasm

3702:AT5G24300
gene id: 3702:AT5G24300
uniprot id: Q9FNF2
uniprot id: W8QN76
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: Circadian-regulation with the lowest levels at the end of the dark period.
messages: Expressed in roots, leaves, stems, buds and flowers.
messages: Involved in the synthesis of short glycan chains within amylopectin in leaves. Is required to generate chains up to about a degree of polymerization of 10 (DP10).
messages: No visible phenotype under normal growth conditions, but mutant plants have reduced starch content in leaves.
messages: amyloplast
messages: chloroplast

3702:AT4G24680
gene id: 3702:AT4G24680
uniprot id: Q9SB63
names: Disruption Phenotype
names: Function
names: Subunit
messages: Interacts with TCP14 and TCP15.
messages: Involved in the regulation of the chromatin structure and DNA methylation at the SNC1 locus. Regulates the expression of SNC1 at chromatin level.
messages: No visible phenotype.

3702:AT5G38330
gene id: 3702:AT5G38330
uniprot id: P82789
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Confers broad-spectrum resistance to pathogens.
messages: Contains 8 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G15940
gene id: 3702:AT1G15940
uniprot id: A0A178WLC2
uniprot id: Q9S9P0
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PDS5 family.
messages: Cohesin cofactor dispensable during the meiotic division but playing an important role in DNA repair by homologous recombination (HR) probably by helping SMC5/SMC6 complex (PubMed:26648949). Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin (PubMed:26648949). May couple sister chromatid cohesion during mitosis to DNA replication (By similarity). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (PubMed:26648949).
messages: Interacts with the cohesin complex.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Weak impact on meiosis such as formation of some chromosome bridges at late anaphase I and telophase I in forming pollen, but severe effects on development, fertility, somatic homologous recombination (HR) and DNA repair, especially in plants lacking PDS5A, PDS5B, PDS5C, PDS5D and PDS5E.

3702:AT1G23310
gene id: 3702:AT1G23310
uniprot id: A0A178WG36
uniprot id: Q9LR30
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. Alanine aminotransferase subfamily.
messages: Catalyzes the glutamate:glyoxylate (GGT or GGAT), alanine:glyoxylate (AGT), alanine:2-oxoglutarate (AKT) and glutamate:pyruvate (GPT) aminotransferase reactions in peroxisomes. Required for abscisic acid (ABA)- and stress-mediated responses in an H(2)O(2)-dependent manner. Functions as a photorespiratory aminotransferase that modulates amino acid content during photorespiration (GGAT activity); promotes serine, glycine and citrulline metabolism in response to light.
messages: Down regulated in the dark. Slightly induced upon low-oxygen stress in shoots.
messages: Homodimer.
messages: Mostly expressed in leaves, and, to a lower extent, in shoots, stems, flowers, seedlings and green siliques.
messages: Peroxisome
messages: Reduced growth. Loss of alanine aminotransferase activity and increased light sensitivity alleviated by addition of sucrose and rescued by high CO(2). Higher H(2)O(2) levels in light conditions. Greater root growth in low water potential and upon NaCl-stress.
messages: The N-terminus is blocked.

3702:AT1G60986
gene id: 3702:AT1G60986
uniprot id: A0A654EJT9
uniprot id: P82623
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Flower buds and roots.
messages: Secreted

3702:AT4G35490
gene id: 3702:AT4G35490
uniprot id: A0A384KJP0
uniprot id: Q9SVW7
names: Similarity
messages: Belongs to the universal ribosomal protein uL11 family.

3702:AT3G23330
gene id: 3702:AT3G23330
uniprot id: A0A1I9LMC5
uniprot id: A0A5S9XEW5
uniprot id: Q9LW63
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT5G54610
gene id: 3702:AT5G54610
uniprot id: Q8GYH5
names: Function
names: Subcellular Location Annotation
messages: Cell membrane
messages: Involved in plant defense. Required for basal resistance against Pseudomonas syringae pv. tomato DC3000. Required for resistance against nonpathogenic bacteria. May be involved in signaling components that function downstream of SNC2 and upstream of NPR1 and WRKY70 to regulate defense responses.

3702:AT1G11590
gene id: 3702:AT1G11590
uniprot id: Q84JX1
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in siliques, but not in flower buds.
messages: Expression restricted to early to mid-stage of silique development. Not found in vegetative stage. Expressed in the micropyle area of the ovule just after fertilization.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT5G66675
gene id: 3702:AT5G66675
uniprot id: Q8GW16
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0496 family.
messages: Membrane

3702:AT4G28640
gene id: 3702:AT4G28640
uniprot id: A0A178UVX3
uniprot id: A0A654FTP6
uniprot id: A8MR39
uniprot id: F4JLC8
uniprot id: Q38829
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers (By similarity). Interacts with TPL.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: Preferentially expressed in stems and flowers.
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT2G13570
gene id: 3702:AT2G13570
uniprot id: A0A384KFW4
uniprot id: C0SV44
uniprot id: Q9SIT9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex (By similarity). The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity).
messages: Expressed in flowers and green siliques.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC (By similarity). NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity). Binds directly with DPB3-1 (PubMed:25490919).
messages: Nucleus
messages: Repressed by heat and dehydration stress.

3702:AT4G10800
gene id: 3702:AT4G10800
uniprot id: A0A1P8B5U8
uniprot id: O81632
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

3702:AT4G37760
gene id: 3702:AT4G37760
uniprot id: Q8VYH2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the squalene monooxygenase family.
messages: Catalyzes the stereospecific oxidation of squalene to (S)-2,3-epoxysqualene, and is considered to be a rate-limiting enzyme in steroid biosynthesis. Can produce not only oxidosqualene, but also 2,3:22,23-dioxidosqualene.
messages: Expressed in seedlings, leaves, stems, inflorescences and siliques.
messages: Membrane

3702:AT5G17030
gene id: 3702:AT5G17030
uniprot id: A0A384LMC1
uniprot id: Q9LFK0
uniprot id: W8QN92
names: Caution
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses low quercetin 3-O-glucosyltransferase activity in vitro.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G30775
gene id: 3702:AT3G30775
uniprot id: P92983
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the proline oxidase family.
messages: Converts proline to delta-1-pyrroline-5-carboxylate.
messages: Down-regulated by salt or drought stress. Up-regulated by proline, hypoosmolarity or rehydration (PubMed:17106685, PubMed:20403182, PubMed:9003320, PubMed:9847097). Activated by BZIP53 (PubMed:16810321).
messages: Mitochondrion
messages: No visible phenotype when grown under normal conditions. Proline hypersensitivity.
messages: Ubiquitous. Highest expression in pollen grains, in the stigma and in developing embryos.

3702:AT4G36580
gene id: 3702:AT4G36580
uniprot id: F4JQE9
names: Similarity
messages: Belongs to the AAA ATPase family.

3702:AT1G78440
gene id: 3702:AT1G78440
uniprot id: A0A5S9WVJ6
uniprot id: Q8LEA2
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By gibberellin A3 (GA3). Not regulated by auxin.
messages: Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Converts GA9/GA20 to GA51/GA29 and GA4/GA1 to GA34/GA8.
messages: Preferentially expressed in flowers, siliques, and upper stems. Not expressed in the apex.

3702:AT1G48030
gene id: 3702:AT1G48030
uniprot id: A0A178W162
uniprot id: Q9M5K3
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Homodimer (By similarity). Part of both the glycine cleavage system composed of four proteins: P, T, L and H and of the pyruvate dehydrogenase complex containing multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
messages: Lipoamide dehydrogenase is a component of the glycine decarboxylase (GDC) or glycine cleavage system as well as of the alpha-ketoacid dehydrogenase complexes. LPD1 is probably the protein most often associated with the glycine decarboxylase complex while LPD2 is probably incorporated into alpha-ketoacid dehydrogenase complexes.
messages: Mitochondrion matrix
messages: Preferentially expressed in leaves, flowers and siliques and at a lower level in roots and stems.
messages: S-nytrosylated at unknown positions.
messages: The active site is a redox-active disulfide bond.
messages: Up-regulated by light.

3702:AT1G05000
gene id: 3702:AT1G05000
uniprot id: F4I780
uniprot id: Q9ZVN4
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein-tyrosine phosphatase family.
messages: Highly expressed in siliques and at lower levels in roots, leaves and flowers.
messages: Homomultimer (Probable). Homodimer and homohexamer (PubMed:18433060).
messages: Possesses phosphotyrosine phosphatase activity in vitro. Hydrolyzes para-nitrophenyl phosphate in vitro (PubMed:21409566, PubMed:18433060). Hydrolyzes O-methylfluorescein phosphate in vitro (PubMed:21409566). Hydrolyzes polyphosphate and ATP in vitro (PubMed:18433060). Dephosphorylates the phosphoinositides PI(3,4,5)P3, PI(3,5)P2, but not PI(3)P, PI(3,4)P2 or PI(4,5)P2 (PubMed:17976645).

3702:AT1G28650
gene id: 3702:AT1G28650
uniprot id: Q3E7I6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G45170
gene id: 3702:AT3G45170
uniprot id: Q9M1U2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT3G63250
gene id: 3702:AT3G63250
uniprot id: Q9M1W4
names: Function
names: Miscellaneous
names: Subunit
names: Tissue Specificity
messages: Catalyzes methyl transfer from S-methylmethionine (SMM) to adenosyl-L-homocysteine (AdoMet). SMM degradation (by HMT-1, HMT-2 and HMT-3) and biosynthesis (by MMT1) constitute the SMM cycle in plants, which is probably required to achieve short term control of AdoMet level.
messages: Expressed predominantly in roots. Expressed in rosette leaves, cauline leaves and developing seeds.
messages: In contrast to HMT-1, it is not inhibited by methionine.
messages: Monomer.

3702:AT1G05170
gene id: 3702:AT1G05170
uniprot id: A0A2H1ZEA5
uniprot id: A0A654E6W1
uniprot id: A8MRC7
uniprot id: W8Q3U9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT1G18640
gene id: 3702:AT1G18640
uniprot id: A0A178W417
uniprot id: O82796
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HAD-like hydrolase superfamily. SerB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the last step in the plastidial phosphorylated pathway of serine biosynthesis (PPSB). The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates. Required for embryo, pollen and root development. May be required preferentially for serine biosynthesis in non-photosynthetic tissues.
messages: Embryo lethal when homozygous.
messages: Ubiquitous. Mainly expressed in shoot and root meristems, vasculature, pollen, anthers, carpels and seeds.
messages: Up-regulated in aerial parts by 8 hours exposure to darkness, whereas longer exposure down-regulate expression in both roots and aerial parts.
messages: chloroplast

3702:AT4G12970
gene id: 3702:AT4G12970
uniprot id: Q9SV72
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Expressed in immature organs, including leaves, stems and flower buds, but not in roots, shoot apical meristem and petals. Detected in the mesophyll tissues but not in the epidermal tissues where stomata develop.
messages: Interacts with ERECTA and TMM.
messages: Positively regulates stomatal density and patterning. Acts by competing with EPF2 (AC Q8LC53) for the same receptors, ERECTA (AC Q42371) and TMM (AC Q9SSD1). Not cleaved by the protease CRSP (AC Q9LNU1) (PubMed:25043023).
messages: Reduced stomatal densities in various organs.
messages: Secreted
messages: The loop (82-95) connecting the two anti-parallel beta-strands (76-81 and 96-101) confers the function to the peptide.
messages: apoplast

3702:AT4G37540
gene id: 3702:AT4G37540
uniprot id: A0A178V3Q3
uniprot id: Q9SZE8
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in young shoots, roots, stems, leaves and flowers.

3702:AT1G26740
gene id: 3702:AT1G26740
uniprot id: Q944L5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

3702:AT1G79730
gene id: 3702:AT1G79730
uniprot id: A0A654EVK8
uniprot id: F4HQA1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PAF1 family.
messages: Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 'Lys-4' (H3K4me3) (PubMed:20363855). Involved in regulation of flowering time. Required for the expression of the flowering repressors and MAD-box genes FLC, AGL27/FLM and AGL31/MAF2. Required for histone H3 trimethylation on 'Lys-4' H3K4me3 at the FLC and AGL27/FLM loci (PubMed:15520273). Involved in the control of seed dormancy and germination (PubMed:21799800).
messages: Component of the nuclear PAF1 complex (PAF1C), which consists of VIP2/ELF7/PAF1, VIP3/SKI8/WDR61, VIP4/LEO1, VIP5/RTF1, VIP6/ELF8/CTR9 and CDC73.
messages: Early flowering, reduced plant size and defects in floral morphology in whorls 1-3, but fully fertile flowers (PubMed:12750345). Reduced seed dormancy and increased germination rate of freshly harvested seeds (PubMed:21799800).
messages: Expressed in roots, leaves and shoot apex.
messages: Nucleus

3702:AT5G19730
gene id: 3702:AT5G19730
uniprot id: Q8VYZ3
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed during late developmental phases of siliques.
messages: Expressed in siliques.
messages: cell wall

3702:AT5G46060
gene id: 3702:AT5G46060
uniprot id: A0A178UFX2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G44810
gene id: 3702:AT1G44810
uniprot id: Q9LPF0
names: Similarity
messages: Belongs to the GeBP family.

3702:AT1G24460
gene id: 3702:AT1G24460
uniprot id: F4I9A2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed ubiquitously in roots, leaves and flowers, and, to a lower extent, in stems.
messages: Highly expressed during germination, flower development, and silique maturation.
messages: Increased sensitivity to high concentrations of NaCl, KCl and LiCl, and also to mannitol-induced osmotic stress (PubMed:21521696). Altered localization of SYP61 and abnormal partial secretion of vacuolar proteins to the apoplast (PubMed:21521696). Enhanced root skewing and epidermal cell file rotation (CFR) probably due to microtubule destabilization, thus leading to abnormal cell morphology in mature regions of roots and the base of hypocotyls (PubMed:28399805).
messages: Interacts with SYP41.
messages: Tethering factor involved in vesicle fusion at the trans-Golgi network (TGN) thus being required for efficient protein trafficking to the vacuole (PubMed:21521696). Implicated in resistance to salt and osmotic stresses (PubMed:21521696). Modulates the cell morphology (e.g. epidermal cell file rotation (CFR) and cell expansion) in mature regions of roots and the base of hypocotyls as well as root skewing, a process leading to root movement within the soil in order to maximize anchorage and nutrient acquisition, probably by regulating microtubule stabilization independently of their orientation (PubMed:28399805).
messages: trans-Golgi network membrane

3702:AT4G27050
gene id: 3702:AT4G27050
uniprot id: A0A178V097
uniprot id: Q9SZ44
names: Caution
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex.
messages: The F-box is necessary for the interaction with ASK proteins (By similarity). Interacts with ASK4.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26000
gene id: 3702:AT3G26000
uniprot id: Q9LU91
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with CUL1, SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT2G34860
gene id: 3702:AT2G34860
uniprot id: O64750
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DnaJ family.
messages: Binds 2 Zn(2+) ions per monomer.
messages: Embryonic lethality due to female gametophyte development arrest at two-nuclear stage (PubMed:15634699). Seedling lethality when homozygous. Pale green leaf, variegated leaf and slow growing phenotype when grown on MS medium supplemented with sucrose (PubMed:25228689, PubMed:27047527).
messages: Expressed in leaves and flowers. Expressed at low levels in siliques.
messages: Interacts in vitro with LTO1.
messages: Involved in female gametophyte development. Required for embryo sac development (PubMed:15634699). Nuclear genome-encoded factor required for the accumulation of photosystem I (PSI) during plant development (PubMed:25228689). Required for light acclimation and chloroplast development (PubMed:27047527).
messages: chloroplast thylakoid lumen

3702:AT1G48440
gene id: 3702:AT1G48440
uniprot id: A0A654EIC3
uniprot id: Q8LDS7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.
messages: Membrane

3702:AT1G56690
gene id: 3702:AT1G56690
uniprot id: Q9FXB9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Mitochondrion

3702:AT3G46290
gene id: 3702:AT3G46290
uniprot id: Q9LX66
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By brassinosteroids (BR).
messages: Cell membrane
messages: Expressed in most vegetative tissues, including leaves, stems and roots, especially in cell elongation regions.
messages: No visible phenotype; due to redundancy with THE1. Herk1 and the1 double mutants are stunted. In herk1-1, shorter hypocotyls without brassinolide (BL) treatment than with BL treatment.
messages: Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner.

3702:AT1G14020
gene id: 3702:AT1G14020
uniprot id: A0A654E9Q2
uniprot id: Q6NQ51
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Glycosyltransferase involved in the formation of rhamnogalacturonan I (RG-I) oligosaccharides in the seed coat mucilage, which is a specialized cell wall with abundant RG-I (By similarity). Transfers the rhamnose residue from UDP-beta-L-rhamnose to RG-I oligosaccharides (PubMed:30082766).
messages: Golgi apparatus membrane

3702:AT3G54110
gene id: 3702:AT3G54110
uniprot id: A0A178V8U1
uniprot id: O81845
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: By cold stress, high light and chloramphenicol.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Over-expression of Arabidopsis UCP1 in tobacco plants increases tolerance to oxidative stress caused by exogenous hydrogen peroxide, or by drought and salt.
messages: PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. Is involved in protecting plant cells against oxidative stress damage and maintaining the redox balance of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. May play a regulatory role during photorespiration.
messages: Slight reduction of shoot mass.
messages: Widely expressed.

3702:AT5G54510
gene id: 3702:AT5G54510
uniprot id: A0A384LDF8
uniprot id: B5X4Z8
uniprot id: Q9LSQ4
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: By auxin. Not regulated by light.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin. Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val. Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys. Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA). The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates (PubMed:15659623). Involved in auxin signal transduction. Inhibits shoot and hypocotyl cell elongation, and lateral root cell differentiation in light (PubMed:11169197).
messages: Expressed in cotyledons, stipules, true leaves, hypocotyls, and all parts of the roots. Not detected in flowers.
messages: The gain-of-function mutant dfl1-D (T-DNA tagging) has a short hypocotyl under blue, red and far-red light, but not in darkness, shows an exaggerated dwarf phenotype in the adult plant caused by the inhibition of cell elongation in shoots, and inhibition of the lateral root growth without any reduction of primary root length.

3702:AT2G35210
gene id: 3702:AT2G35210
uniprot id: O82171
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed specifically in roots, pollen grains and pollen tubes.
messages: GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Activates ARF1 and ARF2. Required for female gametophyte development. Involved in root hair and pollen tube growth.
messages: Golgi apparatus
messages: Plants are arrested during endosperm development and have altered root hair development and pollen tube elongation.
messages: The C-terminal domain (317-395) is responsible for the Golgi localization.

3702:AT4G35920
gene id: 3702:AT4G35920
uniprot id: Q8L7E9
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Calcium-permeable stretch-activated channel component. Involved in mechano-stimulated calcium uptake mechanism and in mechanosensing in the primary root.
messages: Cell membrane
messages: Expressed in roots, leaves, stems, flowers and siliques. Expressed in vascular tissues of cotyledons, leaves and primary root, in the promeristem and adjacent elongation zone of the primary root and in the shoot apical meristem. Detected in the stele and endodermis, but not in the cortex, epidermis or root cap, including the columella. Not expressed in root hairs or in mesophyll cells of leaves and cotyledons.
messages: Inhibited by GdCl(3), but not by verapamil.
messages: No visible phenotype when grown under normal conditions; due to partial redundancy with MCA2. The roots are unable to sense a change in the hardness of the growth medium. Mca1 and mca2 double mutant shows a strong growth defect.

3702:AT5G56260
gene id: 3702:AT5G56260
uniprot id: A0A178U8P6
uniprot id: A0A1P8BCQ5
uniprot id: Q9FH13
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the class II aldolase/RraA-like family.
messages: Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions (By similarity).
messages: Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2-oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
messages: Divalent metal cation.
messages: Homotrimer.

3702:AT1G32450
gene id: 3702:AT1G32450
uniprot id: A0A178WGH3
uniprot id: Q9LQL2
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: High expression in roots. Barely detected in shoots. Expressed in root pericycle cells close to the xylem.
messages: Low-affinity proton-dependent bidirectional nitrate transporter. Involved in nitrate loading into xylem and not in nitrate uptake. Not involved in histidine or dipeptides transport.
messages: No visible phenotype when grown under normal conditions. Lower nitrate concentration in xylem sap. Decreased long-distance root-to-shoot transport of nitrate but not of sulfate or phosphate.
messages: Up-regulated slowly by nitrate. Down-regulated by cadmium and high pH. Circadian-regulation. Expression increase during the dark phase and decrease during the light phase.

3702:AT1G80620
gene id: 3702:AT1G80620
uniprot id: Q9M8M9
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Part of the 30S ribosomal subunit.

3702:AT5G42760
gene id: 3702:AT5G42760
uniprot id: F4K327
uniprot id: F4K328
names: Similarity
messages: Belongs to the UPF0677 family.

3702:AT3G45430
gene id: 3702:AT3G45430
uniprot id: Q9M1G4
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.

3702:AT3G50500
gene id: 3702:AT3G50500
uniprot id: A0A178VHA9
uniprot id: F4J0N1
uniprot id: Q39192
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By abscisic acid (ABA), salt, and osmotic stress (at protein level).
messages: Expressed in seeds, seedlings, roots (especially in tips), stems, leaves, shoots, flowers and siliques.
messages: Interacts with ABI1 (PubMed:19874541). Interacts with I-2, TOPP1 and TOPP2 (PubMed:26943172). Interacts with FREE1 (via C-terminus) (PubMed:30962512).
messages: Together with SRK2I, key component and activator of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as seed germination, Pro accumulation, root growth inhibition, dormancy and seedling growth, and, to a lesser extent, stomatal closure (PubMed:17307925). In response to ABA, phosphorylates the ESCRT-I complex component FREE1, which is required for ABA-induced FREE1 nuclear import (PubMed:30962512).

3702:AT1G07010
gene id: 3702:AT1G07010
uniprot id: Q8L774
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. SLP family.
messages: Binds 2 manganese ions per subunit.
messages: Circadian-regulated, with a peak in expression at 8 hours light time on a 12 hours light/dark cycle (at protein level) (PubMed:21976480). Induced by heat shock. Down-regulated by infection with the bacterial pathogen P.syringae (Probable).
messages: Expressed in rosettes leaves, shoots and flowers (at protein level).
messages: No visible phenotype under normal growth conditions.
messages: Shows phosphatase activity, hydrolyzing the artificial substrate para-nitrophenylphosphate (pNPP) in vitro.
messages: chloroplast

3702:AT4G15000
gene id: 3702:AT4G15000
uniprot id: A0A384KZP3
uniprot id: A0A7G2F0E7
uniprot id: A8MS28
uniprot id: P51419
uniprot id: Q0WRB8
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL27 family.

3702:AT2G32400
gene id: 3702:AT2G32400
uniprot id: Q9SDQ4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in leaves and siliques. Also detected in roots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane

3702:AT5G48570
gene id: 3702:AT5G48570
uniprot id: Q9FJL3
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acid sensitivity and increased susceptibility to P.syringae infection.
messages: Belongs to the FKBP-type PPIase family.
messages: By heat shock and by intracellular acid stress. Up-regulated by HSFA2 and upon pathogen infection.
messages: Cytoplasm
messages: Expressed in the whole plant.
messages: Nucleus
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Co-chaperone that negatively modulates thermotolerance by interacting with FKBP62 and decreasing the HSFA2-mediated accumulation of chaperones of the small-HSPs family. Plays a positive role in tolerance to intracellular acid stress by maintaining the pH homeostasis. May be a part of transcription regulation pathways upon pathogen infection.
messages: This PPIase probably binds calmodulin (By similarity). Forms heterodimers with FKBP62/ROF1.

3702:AT2G43210
gene id: 3702:AT2G43210
uniprot id: Q9ZW74
names: Subunit
messages: Interacts with CDC48A.

3702:AT3G17440
gene id: 3702:AT3G17440
uniprot id: Q9LRP1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the novel plant SNARE family.
messages: Membrane
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT5G54390
gene id: 3702:AT5G54390
uniprot id: A0A654GBF0
uniprot id: Q38945
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the inositol monophosphatase superfamily.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP (PubMed:10205895). May regulate the flux of sulfur in the sulfur-activation pathway by converting PAPS to APS (By similarity). Prevents both the toxicity of PAP on RNA processing enzymes as well as the product inhibition by PAP of sulfate conjugation.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Inhibited by Li(+) (IC(50)=10 mM), Na(+) (IC(50)=50 mM) and Ca(2+) (IC(50)=0.06 mM).
messages: Substrate preference is 3'-phosphoadenosine 5'-phosphate (PAP) = adenosine 3'-phosphate 5'-phosphosulfate (PAPS). No activity observed against 3' or 5'-AMP, inositol mono and diphosphates and fructose-1,6-bisphosphate.

3702:AT5G38960
gene id: 3702:AT5G38960
uniprot id: A0A654G661
uniprot id: Q9FMA6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT1G27260
gene id: 3702:AT1G27260
uniprot id: F4HR62
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G19590
gene id: 3702:AT3G19590
uniprot id: Q9LJN8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat BUB3 family.
messages: Cell cycle regulated expression with a distinct expression peak at the G2/M boundary.
messages: Expressed in actively dividing tissues, early in organ development, in young leaves, lateral root primordia and root meristems, flower buds, flowers and siliques.
messages: Has a dual function in spindle-assembly checkpoint signaling and in promoting the establishment of correct kinetochore-microtubule (K-MT) attachments. Promotes the formation of stable end-on bipolar attachments. Necessary for kinetochore localization of BUB1. The BUB1/BUB3 complex plays a role in the inhibition of anaphase-promoting complex or cyclosome (APC/C) when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20 (By similarity). Essential for gametophyte development.
messages: Nucleus
messages: Part of the mitotic checkpoint complex (MCC); interacts with CDC20-1 and CDC20-2. Interacts with MAD2 and BUBR1.
messages: Survives only in heterozygous state. Displays defects in development of male and female gametophytes.
messages: kinetochore
messages: phragmoplast
messages: spindle

3702:AT1G16610
gene id: 3702:AT1G16610
uniprot id: Q9SEE9
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: According to PubMed:20884799, this protein should not be regarded as a classical SR protein although it could complement an animal in vitro splicing extract deficient in SR proteins.
messages: Belongs to the splicing factor SR family. SR45 subfamily.
messages: Component of the spliceosome. Interacts with AFC2, U2AF35A, U2AF35B, RNU1, SCL33 and SKIP. The interaction with AFC2 depends on phosphorylation status. Interaction with RNU1 defines initial 5' splice sites and interaction with U2AF35B 3' splice sites in the early stage of spliceosome assembly.
messages: Especially present in actively growing regions and dividing cells. Mostly expressed in roots (primary and secondary root meristem), shoot apical meristem (SAM), leaf primordia, pollen and inflorescence, and, to a lower extent, in leaves, vascular tissue, hydathode and fruits.
messages: Involved in 5' and 3' splicing site selection of introns, and may bridge the 5' and 3' components of the spliceosome. Isoform 1 is required during flower petal development and isoform 2 is involved in root growth. Regulates negatively glucose and abscisic acid (ABA) signaling during early seedling development. Involved in the RNA-directed DNA methylation pathway (PubMed:22274613). Modulates KIN10 stability in response to sugars, probably through the splicing regulation of 5PTASE13, a protein implicated in the proteasomal degradation of KIN10 (PubMed:27436712).
messages: Levels of the isoform 2 are altered in response to sucrose depletion (Suc) and temperature changes; reduced in cold but increased in warm temperatures.
messages: Nucleus speckle
messages: Phosphorylated by AFC2. The phosphorylation status regulates intranuclear distribution.
messages: Several developmental defects, including defects in flower and leaf morphology (petal development), delayed flowering time and root growth. Hypersensitivity to glucose (Glc) and to abscisic acid (ABA) during early seedling growth, accompanied with an enhanced ability to accumulate ABA in response to Glc. DNA methylation establishment and maintenance defects. Altered alternative splicing pattern of several related SR genes.
messages: The splicing pattern of the pre-mRNA is regulated in a tissue-specific manner and by development, and changes in response to various types of abiotic stresses.
messages: nucleoplasm

3702:AT5G51950
gene id: 3702:AT5G51950
uniprot id: A0A1P8BHC1
uniprot id: F4KEQ8
uniprot id: Q94KD2
names: Similarity
messages: Belongs to the GMC oxidoreductase family.

3702:AT5G44670
gene id: 3702:AT5G44670
uniprot id: A0A5S9YC49
uniprot id: Q9LTZ9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 92 family.
messages: Expressed in the midrib of mature leaves, root vasculature, flower filaments, siliques and seeds.
messages: Golgi apparatus membrane
messages: Involved in the biosynthesis of beta-1,4-galactan. Beta-1,4-galactans are abundant polysaccharides in plant cell walls and are found as side-chain of rhamnogalacturonan I, which is a major component of pectin.
messages: No visible phenotype under normal growth conditions, but mutant plants have reduced content of beta-1,4-galactan in leaf cell wall.

3702:AT1G72590
gene id: 3702:AT1G72590
uniprot id: Q9CAH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the steroid 5-alpha reductase family. Polyprenol reductase subfamily.
messages: Cell membrane
messages: Expressed in roots and flowers.
messages: Plays a key role in early steps of protein N-linked glycosylation by being required for the conversion of polyprenol into dolichol. Dolichols are required for the synthesis of dolichol-linked monosaccharides and the oligosaccharide precursor used for N-glycosylation. Acts as a polyprenol reductase that promotes the reduction of the alpha-isoprene unit of polyprenols into dolichols in a NADP-dependent mechanism. Involved in the regulation of plant growth and reproductive processes.

3702:AT3G60160
gene id: 3702:AT3G60160
uniprot id: A0A1I9LTC1
uniprot id: A0A1I9LTC2
uniprot id: Q9M1C7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: Membrane
messages: Pump for glutathione S-conjugates.
messages: Ubiquitous.

3702:AT1G76880
gene id: 3702:AT1G76880
uniprot id: Q9C6K3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: No visible phenotype under normal growth conditions, but the double mutant seedlings gtl1-1 and df1-1 exhibit increased root hair length (PubMed:29439132). Reduced amount of seed coat mucilage (PubMed:22735692, PubMed:25658798).
messages: Nucleus
messages: Plants overexpressing DF1 exhibit very short root hairs.
messages: Transcription repressor that negatively regulates root hair growth by directly binding RSL4 promoter and repressing RSL4 expression (PubMed:29439132). Required for the synthesis of seed coat mucilage (PubMed:22735692, PubMed:25658798).

3702:AT1G78280
gene id: 3702:AT1G78280
uniprot id: A0A5S9WVF0
uniprot id: Q9M9E8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: May function as histone H3 lysine demethylase and be involved in regulation of gene expression.
messages: Mostly expressed in leaves, and, to a lower extent, in inflorescences, roots, siliques and stems.
messages: Nucleus

3702:AT1G74100
gene id: 3702:AT1G74100
uniprot id: A0A654EQH9
uniprot id: M1EU36
uniprot id: Q9C9D0
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: By wounding, 12-oxophytodienoic acid, jasmonic acid, ethylene, UV-C and coronatine treatments. Not induced by abscisic acid, 2,4-dichlorophenoxyacetic acid, gibberellin, kinetin, salicylic acid, yeast elicitor or high sulfate concentration.
messages: Cytoplasm
messages: Expression reaching a maximum in 2-week-old plants and a minimum in flowering plants.
messages: Highly expressed in roots, stems and mature leaves. Low expression in young leaves and flowers. Barely detected in siliques.
messages: Inhibited by phosphoadenosine 5'-phosphate (PAP).
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of desulfo-glucosinolates (dsGSs), the final step in the biosynthesis of the glucosinolate core structure. Substrate preference is desulfo-2-phenylethyl glucosinolate > desulfo-indol-3-yl methyl glucosinolate > desulfo-benzyl glucosinolate > desulfo-6-methylthiohexyl glucosinolate > desulfo-4-methylthiobutyl glucosinolate > desulfo-3-methylthiopropyl glucosinolate > desulfo-singrin > desulfo-3-butenyl glucosinolate.

3702:AT4G29720
gene id: 3702:AT4G29720
uniprot id: Q9SU79
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the flavin monoamine oxidase family.
messages: Binds 1 FAD per subunit.
messages: Cytoplasm
messages: Expressed in root vasculature, leaves and stems.
messages: Flavoenzyme involved in polyamine back-conversion (PubMed:24550437, PubMed:24906355, PubMed:26973665, PubMed:28199662). Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine and its acetyl derivatives (PubMed:24550437, PubMed:24906355, PubMed:28199662). Substrate preference is spermine > N(1)-acetylspermine > thermospermine > norspermine (PubMed:24550437). Plays an important role in the regulation of polyamine intracellular concentration (PubMed:24550437, PubMed:26973665, PubMed:28199662). Involved in xylem differentiation by controlling thermospermine homeostasis, and participating in the tightly controlled interplay between auxin and cytokinin that is necessary for proper xylem differentiation (PubMed:28199662). Involved in the production of hydrogen peroxide in response to salt and cold stresses (PubMed:26973665).
messages: Induced by salicylic acid (PubMed:18583528). Down-regulated upon treatment with flagellin 22, a pathogen elicitor (PubMed:18583528). Induced by auxin, cytokinin and thermospermine in roots (PubMed:28199662). Induced by spermine, thermospermine, N-acetylspermine and spermidine in roots (PubMed:24550437).
messages: No visible phenotype of seedlings under normal growth conditions (PubMed:26973665). The double mutants pao1 and pao5 exhibit enhanced tolerance to salt and drought stress (PubMed:26973665). Increased length and thickness of floral stems (PubMed:28199662). Increased length of roots (PubMed:28199662). Delayed transition from vegetative to reproductive stage (PubMed:24906355). Increased levels of thermospermine (PubMed:24906355).

3702:AT1G79920
gene id: 3702:AT1G79920
uniprot id: F4HQD4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. HSP110/SSE subfamily.
messages: Cytoplasm
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions.
messages: Knockout mutation impairs stomatal closure and accelerates wilting, enhances sensitivity to heat treatment, and strengthens tolerance to potyvirus TuMV infection.
messages: Nucleus

3702:AT1G44090
gene id: 3702:AT1G44090
uniprot id: A0A178WC38
uniprot id: Q4PT02
names: Caution
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA20OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in 3-day-old seedlings and siliques. Detected in dry seeds, roots, old leaves and inflorescences.
messages: Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton.
messages: Not controlled by the level of physiologically active gibberellin.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G49850
gene id: 3702:AT1G49850
uniprot id: Q852U6
names: Function
messages: Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro.

3702:AT2G03750
gene id: 3702:AT2G03750
uniprot id: A0A178VL58
uniprot id: Q8RV79
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: No effect on sensitivity to salicylic acid.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G36980
gene id: 3702:AT2G36980
uniprot id: Q9SJK9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT2G37060
gene id: 3702:AT2G37060
uniprot id: A0A5S9X4P4
uniprot id: Q8VYK4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
messages: Expressed in flowers and mature rosettes.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Nucleus

3702:AT3G06450
gene id: 3702:AT3G06450
uniprot id: A0A178V9G0
uniprot id: Q93Z13
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the anion exchanger (TC 2.A.31.3) family.
messages: Membrane
messages: Probable boron transporter. Boron is essential for maintaining the integrity of plants cell walls (By similarity).

3702:AT1G18900
gene id: 3702:AT1G18900
uniprot id: Q8GYP6
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G20330
gene id: 3702:AT5G20330
uniprot id: O49352
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: May play a role in plant defense against pathogens.
messages: Secreted

3702:AT3G14130
gene id: 3702:AT3G14130
uniprot id: A0A1I9LRL0
uniprot id: A0A1I9LRL2
uniprot id: Q9LJH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
messages: Homotetramer.
messages: Oxidase that catalyzes the oxidation of a broad range of 2-hydroxyacids to the corresponding 2-oxoacids, with a reduction of O2 to H2O2. Displays the highest activity with the long-chain fatty acid 2-hydroxydodecanoate and has intermediate activity with 2-hydroxyhexanoate, 2-hydroxyoctanote, and the short-chain hydroxyacid (S)-lactate (L-lactate). With much lower activity, it can also use glycolate, leucic acid, valic acid, and isoleucic acid as substrates in vitro. Cannot use 2-hydroxyhexadecanoate or D-lactate as substrates. May be involved in a general medium- and long-chain fatty acid catabolic pathway such as alpha-oxidation.
messages: Peroxisome

3702:AT5G24080
gene id: 3702:AT5G24080
uniprot id: Q9FLV4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT3G16530
gene id: 3702:AT3G16530
uniprot id: A0A654F7S5
uniprot id: Q9LK72
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the leguminous lectin family.
messages: By oligogalacturonides and chitin (e.g. chito-octamer and crab-shell chitin CSC). Accumulates upon Hyaloperonospora arabidopsidis infection, during both early and late stages of infection.
messages: apoplast

3702:AT5G26760
gene id: 3702:AT5G26760
uniprot id: A0A654G4N3
uniprot id: F4K1B1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RPAP2 family.
messages: Nucleus
messages: Putative RNA polymerase II subunit B1 C-terminal domain (CTD) phosphatase involved in RNA polymerase II transcription regulation.

3702:AT1G21530
gene id: 3702:AT1G21530
uniprot id: Q9LPK7
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Expressed at low levels in roots.
messages: May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.

3702:AT5G06550
gene id: 3702:AT5G06550
uniprot id: Q67XX3
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in inflorescences, roots and siliques, and, at low levels, in leaves and stems.
messages: Histone demethylase that demethylates 'Arg-3' (H4R3me) of histone H4 with a specific activity for H4R3me2 (PubMed:22483719). Involved in the positive regulation of gene expression (PubMed:22483719). Together with JMJ20, regulates positively seed germination by promoting the removal of repressive histone arginine methylations (e.g. H4R3me2) at GA3ox1 and GA3ox2 to trigger gibberellic acid (GA) biosynthesis (PubMed:22483719).
messages: In far-red light (FR)-treated seeds, mainly observed in the radicle of the embryo (PubMed:22483719). Accumulates upon red light (R) in cotyledons (PubMed:22483719).
messages: Nucleus
messages: Plants missing both JMJ20 and JMJ22 exhibit reduced seed germination efficiency during PHYB activation after red light (R)-pulse treatment due to an impaired H4R3me2 removal-dependent derepression of GA3ox1 and GA3ox2 causing lower endogenous gibberellic acid (GA) biosynthesis.
messages: Repressed by the zinc-finger protein SOMNUS when PHYB is inactive in far-red (FR) conditions, but derepressed upon PHYB activation by red light (R).

3702:AT5G03270
gene id: 3702:AT5G03270
uniprot id: A0A178UQW2
uniprot id: A0A1P8BDD2
uniprot id: Q9LYV8
names: Function
names: Similarity
messages: Belongs to the LOG family.
messages: Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (By similarity).
messages: Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.

3702:AT1G59218
gene id: 3702:AT1G59218
uniprot id: P0DI17
uniprot id: P0DI18
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Potential disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT1G60550
gene id: 3702:AT1G60550
uniprot id: A0A654EL98
uniprot id: Q8GYN9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
messages: Homohexamer.
messages: Involved in the biosynthesis of phylloquinone (vitamin K1). Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) (By similarity).
messages: Peroxisome
messages: The hydrogencarbonate anion plays the same catalytic role (proton acceptor) as the side-chain carboxylate group of the essential 'Asp-185' found in actinobacteria, archaea, bacteroidetes, and deltaproteobacteria.

3702:AT2G18720
gene id: 3702:AT2G18720
uniprot id: A0A384LFM7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G25530
gene id: 3702:AT2G25530
uniprot id: A0A1P8B0Z7
uniprot id: Q9SKJ6
names: Similarity
messages: Belongs to the AFG1 ATPase family.

3702:AT2G39460
gene id: 3702:AT2G39460
uniprot id: A0A178VSK4
uniprot id: Q8LD46
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uL23 family.
messages: Binds to a specific region on the 26S rRNA.

3702:AT5G20350
gene id: 3702:AT5G20350
uniprot id: A0A5S9Y6A0
uniprot id: Q52T38
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auto-palmitoylated.
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cytoplasmic vesicle membrane
messages: Expressed in root, leaf, inflorescence stem, pollen and floral tissue.
messages: Golgi apparatus membrane
messages: Interacts with CESA3.
messages: Membrane
messages: Palmitoyltransferase involved in cell growth regulation (Ref.8). Contributes to the palmitoylation of CESA3, thus regulating cellulose biosynthesis (PubMed:35644016).
messages: Plants have various developmental defects, such as short and branched root hairs, short roots, small rosettes, short stature, as well as defective male gametes and pollen tube germination (PubMed:16100337, PubMed:8022944, Ref.7, PubMed:35644016). In low light conditions, short etiolated hypocotyls (PubMed:35644016). Lower S-acylation of CESA3 (PubMed:35644016). The double mutant tip1-5 ixr1-2 exhibits a reduced plant growth with stronger developmental defects phenotypes than each single mutant, and associated with thin cell walls and reduced cellulose content in iterfascicular fiber cells (PubMed:35644016).
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT4G03440
gene id: 3702:AT4G03440
uniprot id: A0A1P8B6C4
uniprot id: Q9ZT72
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G35880
gene id: 3702:AT2G35880
uniprot id: Q9SJ62
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPX2 family.
messages: Expressed in seedlings.
messages: Microtubule-associated protein (MAP) that regulates the orientation of interphase cortical microtubules.
messages: cytoskeleton

3702:AT1G68310
gene id: 3702:AT1G68310
uniprot id: A0A654EXU1
uniprot id: Q9C9G6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MIP18 family.
messages: Central member of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) pathway (PubMed:23104832). Involved in leaf polarity formation (PubMed:21070412). Promotes leaf adaxial identity (PubMed:21070412). May play a role in the cell cycle progression and is required for cell proliferation (PubMed:21070412).
messages: Cytoplasm
messages: Embryonic lethality when homozygous.
messages: Expressed in the embryo, shoot apical meristem, leaf primordia, inflorescence and all floral organs.
messages: Expressed throughout the globular-stage, heart-stage and torpedo-stage embryos.
messages: Nucleus
messages: Part of a complex formed of AE7, CIA1, MMS19 and NAR1. Interacts with CIA1 and MMS19, but not with NAR1.

3702:AT4G39670
gene id: 3702:AT4G39670
uniprot id: Q8L7U7
names: Induction
names: Similarity
messages: Belongs to the GLTP family.
messages: Highly up-regulated during programmed cell death (PCD) induced in acd11 mutant.

3702:AT3G07390
gene id: 3702:AT3G07390
uniprot id: A0A178VEI7
uniprot id: Q94BT2
names: Caution
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Binds 1 heme group non-covalently.
messages: Cell membrane
messages: DOMON domain could bind one heme b.
messages: Expressed during auxin-induced lateral root formation.
messages: Induced between 4 and 8 hours after treatment with auxin and remains high for at least 24 hours.
messages: One-heme-containing cytochrome.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G80740
gene id: 3702:AT1G80740
uniprot id: O49139
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Alternative splice site used 50% of the time in cv. Columbia.
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
messages: Could be the product of a pseudogene. The protein is severely truncated in several ecotypes and the gene even harbors a complete retrotransposon in 3 ecotypes.
messages: Expressed in flowers. Not detected in leaves, roots, seedlings and plants prior formation of flower buds.
messages: May be involved in the CpXpG methylation and in gene silencing.
messages: Nucleus

3702:AT1G72960
gene id: 3702:AT1G72960
uniprot id: A0A1P8ASL0
uniprot id: Q9SSN0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3 GTPase family. RHD3 subfamily.
messages: Endoplasmic reticulum membrane
messages: Probable GTP-binding protein that may be involved in cell development.
messages: Specifically expressed in flowers.

3702:AT1G21540
gene id: 3702:AT1G21540
uniprot id: Q9LPK6
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Expressed in leaves, flowers and developing seeds.
messages: May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.

3702:AT5G56770
gene id: 3702:AT5G56770
uniprot id: A0A178UF70
uniprot id: Q9FJT6
names: Caution
names: Domain
names: Subcellular Location Annotation
messages: Contains a bacterial GIY-YIG-like domain.
messages: Cytoplasm
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G64295
gene id: 3702:AT1G64295
uniprot id: A0A178WBH6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G61890
gene id: 3702:AT5G61890
uniprot id: A0A178UJI0
uniprot id: Q9FH54
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Expressed during the S phase of the cell cycle.
messages: Interacts with AHL27 and AHL29.
messages: Nucleus
messages: Strongly expressed in proliferating cells. Detected in root tips, stipules, shoot apex, floral tissues, young siliques and abscission zones.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional regulator of cell proliferation and axillary bud outgrowth. Involved in maintaining the structure of the shoot apical meristem as well as plastochron and phyllotaxy. Activates several genes involved in cell cycle regulation and dormancy breaking, including CYCD3-3, DPA, and BARD1. Strongly down-regulates DRM1, DRMH1, MARD1 and several genes encoding different types of cell wall-remodeling proteins.
messages: Transiently up-regulated 6 to 15 hours after decapitation.

3702:AT1G29510
gene id: 3702:AT1G29510
uniprot id: A0A654EDW2
uniprot id: F4I1I4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals.

3702:AT5G62890
gene id: 3702:AT5G62890
uniprot id: A0A178UJX3
uniprot id: B9DF96
uniprot id: Q27GI3
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Expressed in the apical region of cotyledons 4 days after imbibition (DAI). Expressed in the whole vasculature at 12 DAI. Expressed in the root central cylinder and lateral root primordia. Expressed in the vasculature of sepals, filaments, carpels and developing siliques.
messages: May be due to intron retention.
messages: Membrane

3702:AT5G03345
gene id: 3702:AT5G03345
uniprot id: A0A2H1ZE54
uniprot id: Q2HIM5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the membrane magnesium transporter (TC 1.A.67) family.
messages: Component of the ER membrane protein complex (EMC).
messages: Early endosome membrane
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Mediates Mg(2+) transport.
messages: Membrane

3702:AT5G28450
gene id: 3702:AT5G28450
uniprot id: F4K8I1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT5G62530
gene id: 3702:AT5G62530
uniprot id: A0A654GDC0
uniprot id: Q8VZC3
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the aldehyde dehydrogenase family.
messages: Highly expressed in flowers (PubMed:11532180). Constitutively expressed at low levels in the other tissues (PubMed:11532180). Highly expressed in pollen grains and tissues undergoing cell death (PubMed:15548746). Expressed in old leaves, mature siliques and developing embryos (PubMed:15548746).
messages: Induced by treatment with proline (PubMed:11532180, PubMed:15548746). Induced by drought stress (PubMed:19635803).
messages: Mitochondrion matrix
messages: No visible phenotype under normal growth conditions, but mutant plants are hypersensitive to treatment with proline (PubMed:15548746). Hypersensitivity to heat stress (PubMed:19635803).
messages: Plays a role in the inhibition of programmed cell death by converting the toxic proline catabolism intermediate (s)-1-pyrroline-5-carboxylate (P5C) to glutamate.

3702:AT2G07240
gene id: 3702:AT2G07240
uniprot id: F4IK98
names: Similarity
messages: Belongs to the peptidase C48 family.

3702:AT4G23990
gene id: 3702:AT4G23990
uniprot id: A0A1P8B8H8
uniprot id: Q0WVN5
uniprot id: W8Q2Y5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like G subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

3702:AT1G10585
gene id: 3702:AT1G10585
uniprot id: A0A178WJI7
uniprot id: F4I4E1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bHLH protein family.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G54120
gene id: 3702:AT3G54120
uniprot id: A0A654FFM6
uniprot id: Q9M392
names: Caution
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT3G16560
gene id: 3702:AT3G16560
uniprot id: Q9LUS8
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT4G12760
gene id: 3702:AT4G12760
uniprot id: F4JRF6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G67900
gene id: 3702:AT1G67900
uniprot id: A0A178W6L6
uniprot id: Q9C9V6
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT2G06983
gene id: 3702:AT2G06983
uniprot id: A0A178VVQ3
uniprot id: A0A1P8B264
uniprot id: P82635
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G03460
gene id: 3702:AT4G03460
uniprot id: A0A1P8B631
uniprot id: F4JG84
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G66880
gene id: 3702:AT5G66880
uniprot id: Q39193
names: Activity Regulation
names: Function
names: Induction
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by autophosphorylation of its activation loop.
messages: Autophosphorylated in vitro.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By abscisic acid (ABA), salt, and osmotic stress (at protein level).
messages: Expressed at low levels in seeds, seedlings, roots (especially in tips), stems, leaves, shoots, flowers and siliques.
messages: Interacts with ABI1 (PubMed:19874541). Interacts with I-2 and TOPP1 (PubMed:26943172). Interacts with FREE1 (via C-terminus) (PubMed:30962512).
messages: Together with SRK2D, key component and activator of the abscisic acid (ABA) signaling pathway that regulates numerous ABA responses, such as seed germination, Pro accumulation, root growth inhibition, dormancy and seedling growth, and, to a lesser extent, stomatal closure (PubMed:17307925). In response to ABA, phosphorylates the ESCRT-I complex component FREE1, which is required for ABA-induced FREE1 nuclear import (PubMed:30962512).

3702:AT1G73580
gene id: 3702:AT1G73580
uniprot id: A0A178WEL5
uniprot id: Q9C6B7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus.
messages: Cell membrane
messages: Membrane
messages: Nucleus
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity).

3702:AT3G57880
gene id: 3702:AT3G57880
uniprot id: A0A384L1I1
uniprot id: Q9M2R0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in vascular tissues, leaf primordia and developing flowers (PubMed:29259105). Highly expressed in both vegetative and inflorescence shoot apical meristems (SAMs) (PubMed:29742441, PubMed:29259105).
messages: Belongs to the MCTP family.
messages: Cell membrane
messages: Cytoplasm
messages: Endoplasmic reticulum membrane
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Interacts with and regulates subcellular localization and trafficking of STM.
messages: Membrane
messages: No visible phenotypes. Plants lacking both FTIP3 and FTIP4 have a dwarf and bushy phenotype due to an accelerated stem cell differentiation causing early termination of shoot apices associated with an increased STM localization to the plasma membrane, but compromises nuclear localization.
messages: Required for proliferation and differentiation of shoot stem cells in the shoot apical meristem (SAM), thus determining the appropriate balance between the maintenance of shoot stem cells and their differentiation into other aboveground plant parts via the control of subcellular localization and intercellular trafficking of STM in the shoot apex. Prevents intracellular trafficking of STM to the plasma membrane in cells in the peripheral shoot meristem region thus facilitating STM recycling to the nucleus to maintain stem cells.
messages: Vesicle

3702:AT3G19160
gene id: 3702:AT3G19160
uniprot id: A0A178VHX4
uniprot id: Q9LJL4
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the IPP transferase family.
messages: Expressed at the early stages of embryo development, up to the late heart stage.
messages: Expressed in roots and in immature seeds with highest expression in the chalazal endosperm.
messages: Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP and ADP.
messages: No visible phenotype, due the redundancy with other IPTs.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT3G02780
gene id: 3702:AT3G02780
uniprot id: A0A1I9LM15
uniprot id: A0A5S9X8V2
uniprot id: Q42553
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the IPP isomerase type 1 family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
messages: chloroplast

3702:AT4G10595
gene id: 3702:AT4G10595
uniprot id: P82717
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G58060
gene id: 3702:AT5G58060
uniprot id: A0A178UM80
uniprot id: F4KDI1
uniprot id: Q9ZRD6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the synaptobrevin family.
messages: Cell membrane
messages: Expressed ubiquitously in roots, stems, flowers and leaves.
messages: Interacts with SYP41 (PubMed:15919093). Core constituent of the SNARE complex required for membrane fusion at the trans-Golgi network (PubMed:15919093).
messages: May be involved in the secretory pathway (By similarity). Essential for membrane fusion mediated by either SYP41 or SYP61; triggers the fusion of phospholipid vesicles containing SYP41 or SYP61 and VTI12 (PubMed:15919093).
messages: Membrane

3702:AT1G02730
gene id: 3702:AT1G02730
uniprot id: A0A384L2H6
uniprot id: Q9SRW9
uniprot id: W8QPC8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.
messages: Expressed at its highest level between 21 and 25 days, during the inflorescence stem elongation phase.
messages: Expressed in vascular tissues.
messages: Golgi apparatus membrane
messages: Involved in stem and root growth. Possesses xylan and homogalacturonan synthase activity.
messages: Membrane
messages: Significant reduction of root and stem growth, xylan reduction in stem and increased susceptibility to the cellulose synthase inhibitor isoxaben.

3702:AT5G51230
gene id: 3702:AT5G51230
uniprot id: A0A178UM24
uniprot id: Q8L6Y4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the VEFS (VRN2-EMF2-FIS2-SU(Z)12) family.
messages: Expressed in the developing embryos and endosperm, then decreases when embryos mature and soon after cellularization in the endosperm. After germination, it is expressed in the shoot apical meristems (SAMs), leaf primordia, and young leaves. In the reproductive shoots, it is expressed in both the influorescence and floral meristems. Later, it is expressed in floral organ primordia. In coflorescences, it is expressed in SAMs and lateral organs. In roots, it is expressed in root tips.
messages: In plants, PcG complexes are probably composed of a member of the EZ family (CLF or MEA), FIE, and a member of the VEFS family (FIS2, VRN2 or EMF2) (By similarity). Binds to ALP1 (PubMed:26642436).
messages: Nucleus
messages: Polycomb group (PcG) protein. Involved in flowering processes by repressing unknown target genes and preventing reproductive development. Participates in polycomb group (PcG) protein complex-mediated (probably in complex with EMF1) silencing of the flower homeotic genes AGAMOUS (AG), PISTILLATA (PI), and APETALA3 (AP3), as well as of some regulatory genes such as ABSCISIC ACID INSENSITIVE3 (ABI3), LONG VEGETATIVE PHASE1 (LOV1), and FLOWERING LOCUS C (FLC) during vegetative development, by mediating trimethylation of histone 3 lysine 27 on the AG chromatin (H3K27me3). PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility.
messages: Widely expressed throughout the life cycle with higher levels in proliferating tissues. Expressed in both vegetative and the reproductive shoot meristems.

3702:AT5G15530
gene id: 3702:AT5G15530
uniprot id: A0A178U9S1
uniprot id: Q9LLC1
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and 2 subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD).
messages: Primarily expressed in 7 to 10 days after flowering seeds at levels approximately 2-fold less abundant than BCCP1.
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
messages: chloroplast

3702:AT4G13560
gene id: 3702:AT4G13560
uniprot id: A0A384KL48
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G36460
gene id: 3702:AT2G36460
uniprot id: A0A178VRN7
uniprot id: B3H6D7
uniprot id: Q9SJQ9
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: By glucose, fructose and sucrose (PubMed:22561114). Induced by abiotic stresses (PubMed:22561114). Induced by cadmium (PubMed:16502469).
messages: Expressed in roots, rosettes leaves, cauline leaves, stems and flowers.
messages: Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis (PubMed:21782461). Associates with GAPC1 to the outer mitochondrial membrane, in a redox-dependent manner, leading to binding and bundling of actin. Actin binding and bundling occurs under oxidizing conditions and is reversible under reducing conditions. May be part of a redox-dependent retrograde signal transduction network for adaptation upon oxidative stress (PubMed:23316205).
messages: Homotetramer (By similarity). Interacts with TRX1 and TRX3 (PubMed:21782461). Interacts with GAPC1 and VDAC3 (PubMed:23316205).
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions, but mutant seeds have increased germination rate in presence of high salt or high mannitol, and decreased germination rate in presence of abscisic acid (ABA), glucose, fructose and sucrose.
messages: Nucleus
messages: S-glutathionylated at Cys-68 and Cys-173.
messages: S-nitrosylated at Cys-173.
messages: Total and irreversible inhibition by S-nitrosoglutathione (GSNO) (PubMed:21782461). Partial and reversible inhibition by oxidized glutathione (GSSG) (PubMed:21782461).
messages: cytosol

3702:AT5G43270
gene id: 3702:AT5G43270
uniprot id: Q9S840
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed constitutively during plant development, weak increase during flowering.
messages: Negatively regulated by microRNAs miR156 and miR157 (Probable). Up-regulated by Turnip mosaic virus P1/HC-Pro protein, that acts as an antagonist of miR156.
messages: Nucleus
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.

3702:AT1G79150
gene id: 3702:AT1G79150
uniprot id: A0A654EQ96
uniprot id: F4IDJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CBF/MAK21 family.
messages: Component of nucleolar complexes (PubMed:30338215). Interacts with RBL and NOC2 in both the nucleolus and nucleoplasm (PubMed:30338215).
messages: May be required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm (By similarity). Also required for initiation of DNA replication (PubMed:17556508).
messages: Nucleus
messages: nucleolus
messages: nucleoplasm

3702:AT4G14560
gene id: 3702:AT4G14560
uniprot id: P49677
uniprot id: Q67YC2
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers.
messages: Homodimers and heterodimers. Interacts with the auxin-responsive protein IAA2. Interacts with TPL.
messages: Nucleus
messages: Phosphorylated by phytochrome A in vitro.
messages: Preferentially expressed in stems, leaves and flowers.
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT1G49040
gene id: 3702:AT1G49040
uniprot id: Q8RXA7
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Defects in seedling development, root elongation, leaf expansion, flower morphogenesis and fertility due to defective cytokinesis in epidermal cells.
messages: Expressed in roots, rosette and cauline leaves, buds and flowers.
messages: Interacts with FLS2.
messages: Involved in growth and development through its role in cytokinesis and polarized cell expansion (PubMed:12874123). Required for plasma membrane internalization. May function in clathrin-mediated membrane trafficking, including plasma membrane endocytosis, essential to both cytokinesis and cell expansion (PubMed:24179130). Acts as a negative regulator of basal resistance against bacteria (PubMed:20472560).
messages: clathrin-coated vesicle

3702:AT3G49645
gene id: 3702:AT3G49645
uniprot id: A0A384KU80
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G10360
gene id: 3702:AT5G10360
uniprot id: A0A178USM6
uniprot id: F4KGU2
uniprot id: P51430
names: Function
names: PTM
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS6 family.
messages: Component of the 40S small ribosomal subunit (By similarity). Plays an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (By similarity).
messages: Ribosomal protein S6 is the major substrate of protein kinases in eukaryote ribosomes.

3702:AT2G41870
gene id: 3702:AT2G41870
uniprot id: A0A178VZY2
uniprot id: P93758
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the remorin family.
messages: Cell membrane
messages: Collaborates with REM4.1 to positively regulate the BCTV and BSCTV susceptibility.
messages: Forms homodimer and heterodimer with REM4.1 (PubMed:25289013). Interacts with KIN11 (PubMed:25289013).
messages: Induced by mannitol, NaCl, drought, as well exogenous abscisic acid (ABA) application.
messages: Predominantly detected in bud, stem, root, flower, silique, and leaves, and enhanced dramatically in senescence leaf.
messages: Probably ubiquitinated and degraded by the 26S proteasome pathway.
messages: Slightly reduced susceptibility to Beet Curly Top Virus and Beet Severe Curly Top Virus. The double mutant rem4.1 rem4.2 displays resistance to BCTV and BSCTV.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G09310
gene id: 3702:AT5G09310
uniprot id: A0A178UHT1
uniprot id: Q9FY84
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PEN-2 family.
messages: Membrane
messages: Probable component of the gamma-secretase complex, a complex composed of a presenilin homodimer, nicastrin, APH1 and PEN2.
messages: Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.

3702:AT3G61590
gene id: 3702:AT3G61590
uniprot id: Q9M310
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1, SKP1B/ASK2, ASK3, ASK9, ASK11, ASK12, ASK13, ASK14, ASK16 and ASK18.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G64580
gene id: 3702:AT5G64580
uniprot id: F4KF14
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AAA ATPase family.
messages: Embryo defective (PubMed:24964212, PubMed:21139083). Impaired plastid biogenesis and thylakoid differentiation in embryo. Defects in the photosystem II protein complex formation (PubMed:24964212).
messages: Functions in chloroplast biogenesis and chloroplast division. Required for plastid development during embryogenesis (PubMed:24964212). Might be involved in chaperone functions or play a structural role in the thylakoid FtsH complex (PubMed:12185496).
messages: Homooligomer. Interacts with FtsHi2.
messages: Lacks the conserved zinc-binding motif HEXXH, which presumably renders it inactive for proteolysis.
messages: Ubiquitous but preferentially expressed in young leaves.
messages: chloroplast thylakoid membrane

3702:AT1G73040
gene id: 3702:AT1G73040
uniprot id: A0A178WMS9
uniprot id: Q9SSM3
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT1G34040
gene id: 3702:AT1G34040
uniprot id: A0A1P8ASE5
uniprot id: Q9FE98
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alliinase family.
messages: Membrane
messages: Probable aminotransferase.

3702:AT3G18980
gene id: 3702:AT3G18980
uniprot id: A0A178V4Q5
uniprot id: Q9LJ68
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subunit
messages: Double knock-down mutants of ETP1 and ETP2 show an accumulation of EIN2 protein and a constitutive ethylene response.
messages: Ethylene treatment has no effect on RNA, but down-regulates the protein levels.
messages: Interacts with EIN2 (via C-terminus).
messages: Negative regulator of EIN2 protein stability.
messages: Slight ethylene hypersensitivity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G61820
gene id: 3702:AT3G61820
uniprot id: A0A5S9XPM5
uniprot id: Q9M356
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT3G26170
gene id: 3702:AT3G26170
uniprot id: Q541W8
uniprot id: Q9LTM4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT4G24920
gene id: 3702:AT4G24920
uniprot id: A0A178UWJ6
uniprot id: P0DI74
uniprot id: P0DI75
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Endoplasmic reticulum membrane
messages: Heterotrimeric complex composed of SEC61-alpha, SEC61-beta and SEC61-gamma.
messages: Membrane
messages: Necessary for protein translocation in the endoplasmic reticulum.

3702:AT3G57100
gene id: 3702:AT3G57100
uniprot id: Q9M1J0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0496 family.
messages: Membrane

3702:AT3G17650
gene id: 3702:AT3G17650
uniprot id: A0A178VH68
uniprot id: Q9LUN2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YSL (TC 2.A.67.2) family.
messages: May be involved in the transport of nicotianamine-chelated metals.
messages: Membrane

3702:AT5G11180
gene id: 3702:AT5G11180
uniprot id: A0A654G057
uniprot id: A0A7G2FCT0
uniprot id: Q9LFN8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells.
messages: May form heteromers.
messages: Membrane

3702:AT1G18800
gene id: 3702:AT1G18800
uniprot id: A0A178W8U0
uniprot id: Q8LC68
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as histone H2A/H2B chaperone in nucleosome assembly, playing a critical role for the correct expression of genes involved in root proliferation and patterning. Required with NRP1 for the maintenance of cell proliferation and differentiation in postembryonic root growth. Involved in both intramolecular and intermolecular somatic homologous recombination.
messages: Belongs to the nucleosome assembly protein (NAP) family.
messages: Can form homomeric and heteromeric protein complexes with NRP1 (PubMed:17122067, PubMed:31213016). Binds histones H2A and H2B and associates with chromatin in vivo (PubMed:17122067).
messages: Cytoplasm
messages: Double mutant nrp1-nrp2 shows arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips resulting in a short-root phenotype (PubMed:17122067). Double mutant nrp1-nrp2 also displays hypersensitive response to DNA damage (PubMed:17122067) and impaired somatic homologous recombination (PubMed:22534127).
messages: No visible phenotype.
messages: Nucleus
messages: The acidic domain is probably involved in the interaction with histones.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT3G12960
gene id: 3702:AT3G12960
uniprot id: Q9LE44
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the LEA type 3 family.
messages: Boiling-stable protein.
messages: Increased seed germination rate after high temperature fluctuation due to a reduced seed dormancy; fail to enter secondary dormancy after 3 days at 40 degrees Celsius.
messages: Protein chaperone involved in seed maturation and dormancy maintenance after high temperature fluctuation (e.g. secondary dormancy after 3 days at 40 degrees Celsius), probably by protecting heat labile proteins required for secondary dormancy (e.g. G6PDH, HOP3, SR45, ECP63, SCL33, RPL32B, ChlADR1, MSBP1, MBF1B, At3g01690, At1g15280, At1g15290, At2g31410, At1g11630, At1g65090, EMB2279, EMB1674 and RPL35C).

3702:AT4G37510
gene id: 3702:AT4G37510
uniprot id: Q9SZV0
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis.
messages: Interacts with RNA. Part of large ribonucleo-protein particles that contain CAF1 and/or CAF2.
messages: chloroplast

3702:AT2G21030
gene id: 3702:AT2G21030
uniprot id: F4IFN0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BRX family.
messages: Nucleus

3702:AT4G35870
gene id: 3702:AT4G35870
uniprot id: A0A097NUT0
uniprot id: A0A654FW02
uniprot id: Q9SZT4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accumulated 12S globulin precursors in seeds.
messages: Acts as an osmosensitive calcium-permeable cation channel.
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Membrane

3702:AT5G06980
gene id: 3702:AT5G06980
uniprot id: Q9FL48
names: Disruption Phenotype
names: Function
names: Induction
names: Subunit
messages: Interacts with REV8.
messages: No effect on circadian clock.
messages: Probable transcriptional coactivator.
messages: Repressed by members of the TOC1/PRR1 family of clock genes.

3702:AT4G03020
gene id: 3702:AT4G03020
uniprot id: A0A384L310
uniprot id: Q8LPI5
names: Similarity
messages: Belongs to the WD repeat LEC14B family.

3702:AT1G53390
gene id: 3702:AT1G53390
uniprot id: Q9MAG3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane

3702:AT3G51780
gene id: 3702:AT3G51780
uniprot id: Q8RX71
names: Disruption Phenotype
names: Function
names: Induction
names: Subunit
names: Tissue Specificity
messages: Binds to the ATPase domain of HSP70/HSC70 chaperones (By similarity). Interacts with HSP70-1.
messages: By cold, by salicylic acid (SA), by abscisic acid (ABA) and by pathogen B.cinerea attack.
messages: Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses.
messages: Detected in stems, leaves, flowers and roots.
messages: Early flowering and shorter vegetative and reproductive phases, with more branched roots and inflorescences. Early senescence. Enhanced susceptibility to salt stress. Hypersensitivity to light.

3702:AT1G18350
gene id: 3702:AT1G18350
uniprot id: A0A178W604
uniprot id: Q9LPQ3
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily.
messages: By Pseudomonas syringae pv. tomato (Pst) DC3000/avrRpt2 infection.
messages: Expressed in all tissues, with a relatively higher level in leaves and lower level in roots and flowers.
messages: Interacts with MPK15.
messages: May function as a negative regulator of polar auxin transport. Positively regulates plant basal and systemic acquired resistance (SAR). Activates MPK3 and MPK6 in vitro.
messages: Overexpression of MKK5 (mutant bud1) causes deficiency in polar auxin transport and leads to plant architectural abnormality (PubMed:16377756). The bud1 mutant accumulates elevated levels of SA, and exhibits constitutive PR gene expression and enhanced resistance to both bacterial and oomycete pathogens (PubMed:17908155).
messages: Phosphorylation at Ser-193 and Ser-199 by MAP kinase kinase kinases positively regulates kinase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G63310
gene id: 3702:AT3G63310
uniprot id: Q9M1V9
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: (Microbial infection) Facilitates the development of the powdery mildew fungus E.cruciferarum.
messages: (Microbial infection) May prevent cell death upon A.alternata f.sp. lycopersici (AAL) toxin treatment.
messages: Belongs to the BI1 family.
messages: Delayed development of the powdery mildew fungus E.cruciferarum. Increased cell death upon A.alternata f.sp. lycopersici (AAL) toxin treatment.
messages: Expressed in seedlings, roots, leaves, inflorescences and flowers.
messages: Membrane
messages: Regulates the brassinosteroid (BR) signaling pathway that mediates cell elongation and organ morphogenesis (PubMed:19202280).
messages: Repressed by Brz, a triazole compound that acts as a brassinosteroid (BR)-specific inhibitor.

3702:AT1G56130
gene id: 3702:AT1G56130
uniprot id: C0LGH2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT3G61450
gene id: 3702:AT3G61450
uniprot id: A0A178VEJ3
uniprot id: A0A1I9LPJ7
uniprot id: A0A1I9LPJ8
uniprot id: A0A1I9LPJ9
uniprot id: A0A1I9LPK0
uniprot id: A0A654FJQ8
uniprot id: A0A7G2EZ63
uniprot id: F4JEA3
uniprot id: Q94KK5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the syntaxin family.
messages: Expressed in root, leaf, stem, flower and silique.
messages: Membrane
messages: Part of the t-SNARE complex.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT5G47600
gene id: 3702:AT5G47600
uniprot id: A0A178U8V7
uniprot id: Q6NLV0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Cytoplasm
messages: May form oligomeric structures.

3702:AT2G17110
gene id: 3702:AT2G17110
uniprot id: A0A178VUM9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G03290
gene id: 3702:AT4G03290
uniprot id: Q9ZR02
names: Function
names: Similarity
messages: Belongs to the calmodulin family.
messages: Potential calcium sensor.

3702:AT1G01420
gene id: 3702:AT1G01420
uniprot id: A0A1P8AUD8
uniprot id: Q9LNI1
uniprot id: W8PW48
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses low quercetin 3-O-glucosyltransferase activity in vitro.

3702:AT1G02530
gene id: 3702:AT1G02530
uniprot id: A0A178WBY9
uniprot id: Q9FWX8
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G28740
gene id: 3702:AT2G28740
uniprot id: A0A384LKZ7
uniprot id: P59259
uniprot id: Q6NR90
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: May be acetylated by MBD9.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. Interacts with ORTH2 (PubMed:17242155). Interacts with AHL27 (PubMed:24218605).

3702:AT5G05340
gene id: 3702:AT5G05340
uniprot id: A0A5S9Y1L6
uniprot id: Q9FLC0
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT3G16500
gene id: 3702:AT3G16500
uniprot id: A0A1I9LMH6
uniprot id: A0A654F7S9
uniprot id: Q8LAL2
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers (By similarity). Interacts with phytochrome A. Interacts with TPL.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT1G79700
gene id: 3702:AT1G79700
uniprot id: A0A1P8ATB5
uniprot id: A0A1P8ATD6
uniprot id: A0A654EQG3
uniprot id: A0JPZ8
uniprot id: A8MQS2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G76520
gene id: 3702:AT1G76520
uniprot id: A0A178W0X0
uniprot id: Q9C9K5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the auxin efflux carrier (TC 2.A.69.2) family.
messages: Endoplasmic reticulum membrane
messages: Expressed in seedlings, rosette and cauline leaves, flowers and siliques.
messages: Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.
messages: Membrane
messages: Up-regulated by auxin application.

3702:AT4G36620
gene id: 3702:AT4G36620
uniprot id: A0A178V0H9
uniprot id: Q6QPM2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the type IV zinc-finger family. Class B subfamily.
messages: Effects on sepal fusion, petal number, fertility defects, and carpel abnormality.
messages: Expressed throughout the inflorescence meristem (IM) and early stages of floral primordia. In developing flowers, restricted to the innert hree whorls, speci fi cally in the petals, stamens, and carpels. Within the stamens, mostly detected in the anther locules as well as in the vascular strands. In carpels, mainly present in ovules.
messages: Forms heterodimers with GATA18.
messages: Nucleus
messages: Repressed by HAN.
messages: Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Regulates both flower and shoot apical meristem (SAM) development, especially for establishing organ boundaries in shoots and flowers, probably by controlling the number and position of WUS-expressing cells (PubMed:23335616, PubMed:25077795).

3702:AT4G11250
gene id: 3702:AT4G11250
uniprot id: A0A654FN72
uniprot id: Q9SUT6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G42950
gene id: 3702:AT2G42950
uniprot id: A0A384KZS7
uniprot id: Q8GY73
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G61440
gene id: 3702:AT5G61440
uniprot id: Q9XFI1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family.
messages: Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.
messages: The active site contains a CGGC motif wich differs from the conserved CGPC motif.
messages: chloroplast

3702:AT5G07440
gene id: 3702:AT5G07440
uniprot id: A0A178UEW8
uniprot id: F4K6P9
uniprot id: Q38946
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
messages: Mitochondrion

3702:AT5G26090
gene id: 3702:AT5G26090
uniprot id: A0A1P8BCW9
uniprot id: A0A654G481
uniprot id: F4JZP8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G51913
gene id: 3702:AT1G51913
uniprot id: A0A178WPE1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G62930
gene id: 3702:AT5G62930
uniprot id: A0A178UF04
uniprot id: A0A1P8BGM5
uniprot id: A0A1P8BGN5
uniprot id: Q9FM04
names: Caution
names: Similarity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G12300
gene id: 3702:AT3G12300
uniprot id: A0A384LN09
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G40880
gene id: 3702:AT5G40880
uniprot id: A0A384LLK6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G24690
gene id: 3702:AT5G24690
uniprot id: A0A654G4D5
uniprot id: Q93W02
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RETICULATA family.
messages: chloroplast membrane

3702:AT5G58590
gene id: 3702:AT5G58590
uniprot id: A0A384LJ84
uniprot id: P92985
uniprot id: Q1WWI2
names: Subcellular Location Annotation
messages: nuclear pore complex

3702:AT5G01460
gene id: 3702:AT5G01460
uniprot id: Q9M028
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LIMR family.
messages: Membrane

3702:AT1G12570
gene id: 3702:AT1G12570
uniprot id: A0A178W4G2
uniprot id: Q66GI5
names: Caution
names: Similarity
messages: Belongs to the GMC oxidoreductase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G43090
gene id: 3702:AT5G43090
uniprot id: Q9FMH4
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT1G27520
gene id: 3702:AT1G27520
uniprot id: Q9SXC9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 47 family.
messages: Can convert Man(9)GlcNAc(2) and Man(8)GlcNAc(2) into N-glycans with a terminal alpha-1,6-linked Man residue in the C-branch. Functions in the formation of unique N-glycan structures that are specifically recognized by components of the endoplasmic reticulum-associated degradation (ERAD) machinery, which leads to the degradation of misfolded glycoproteins. Most likely generates N-glycan signal on misfolded glycoproteins that is subsequently recognized by OS9. Required for ERAD of the heavily glycosylated and misfolded BRI1 variants BRI1-5 and BRI1-9. Does not seem to play role in N-glycan processing of correctly folded proteins destined for secretion.
messages: Endoplasmic reticulum membrane

3702:AT1G05450
gene id: 3702:AT1G05450
uniprot id: A0A5S9SS38
uniprot id: Q1G2Y5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Membrane
messages: Probable lipid transfer protein.

3702:AT5G16290
gene id: 3702:AT5G16290
uniprot id: Q9FFF4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the acetolactate synthase small subunit family.
messages: Expressed in roots in the vascular tissuem in cells around the quiescent center, in floral organs at the tips of young siliques and in the joint region between the silique and the pedicel. Barely detectable in mature leaves or siliques.
messages: No visible phenotype under normal growth conditions (PubMed:28388946). The double mutants aip1 and aip3 exhibit a lethal phenotype; they fail to develop adult organs, are chlorotic and die (PubMed:28388946).
messages: Peroxisome
messages: Regulatory subunit of acetohydroxy-acid synthase (PubMed:20497381, PubMed:28388946). Involved in the feed-back inhibition by branched-chain amino acids but not in herbicide tolerance (PubMed:20497381, PubMed:28388946). May play a role in valine and isoleucine-mediated feedback inhibition in roots (PubMed:28388946). In vitro, inhibited by valine, but not leucine or isoleucine (PubMed:28522547). Required for reproductive development and sodium homeostasis (PubMed:28388946).
messages: The acetolactate synthase complex contains 4 homodimers of the large catalytic subunits, and 1 homotetramer of the small regulatory subunits.
messages: chloroplast

3702:AT2G21240
gene id: 3702:AT2G21240
uniprot id: A0A178VSW9
uniprot id: Q8S8C6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Alanine-zipper domain is involved in homo- or hetero-dimerization via electrostatic interaction.
messages: Belongs to the BBR/BPC family.
messages: Expressed in seedlings, leaves and pistils. Detected in the base of flowers and tips of carpels, in sepal and petal vasculature, in anthers, in young rosette, in the lateral and primary roots, and in the whole ovule.
messages: Homodimer. Heterodimer with BPC4.
messages: Nucleus
messages: Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.

3702:AT2G35980
gene id: 3702:AT2G35980
uniprot id: A0A5S9X4W8
uniprot id: Q9SJ52
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By ethylene, abscisic acid (ABA), beta-aminobutyric acid (BABA), spermine, dark and infection with the cucumber mosaic virus (CMV) (PubMed:11230571, PubMed:14666423, PubMed:22947164). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:23221759).
messages: Cell membrane
messages: Expressed in senescing leaves.
messages: May play a role in plant immunity.
messages: Membrane
messages: Up-regulated in leaves during natural senescence.

3702:AT4G31640
gene id: 3702:AT4G31640
uniprot id: Q9SB80
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G26010
gene id: 3702:AT4G26010
uniprot id: A0A178V714
uniprot id: A0A1P8B428
uniprot id: A0A654FT14
uniprot id: Q93V93
names: Caution
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT3G26140
gene id: 3702:AT3G26140
uniprot id: A0A1I9LMY1
uniprot id: A0A1I9LMY2
uniprot id: Q9LTM8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 5 (cellulase A) family.
messages: Secreted

3702:AT3G25020
gene id: 3702:AT3G25020
uniprot id: Q9LJS0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Impaired perception of fungal endopolygalacturonases (e.g. BcPG3) leading to absence of necrosis upon B.cinerea BcPG3, BcPG2, BcPG4, and BcPG6 or A.niger AnPGB treatments.
messages: Interacts with BcPG3.
messages: Recognizes fungal (e.g. B.cinerea and A.niger) endopolygalacturonases (PGs, e.g. BcPG3, BcPG2, BcPG4, BcPG6 and AnPGB) and acts as a microbe-associated molecular pattern (MAMP) receptor to mediate defense response against fungi (e.g. B.cinerea) and oomycetes (e.g. H.arabidopsidis). Functionality seems to depend on the presence of the receptor kinase SOBIR1 as an adapter protein.

3702:AT1G76180
gene id: 3702:AT1G76180
uniprot id: A0A178WC69
uniprot id: P42763
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant dehydrin family.
messages: By dehydration, cold stress and abscisic acid (ABA). Induction by dehydration occurs after 1 hour and increases to a maximum after 10 hours. Cold stress induction peaks at 1 hour and 5 hours after start of cold exposure.
messages: In stems, cauline leaves, roots and flowers. Low levels found in maturing seeds. Absent in dry seeds.
messages: Intrinsically disordered protein acting as a chaperone. Prevents heat-induced aggregation and/or inactivation of various substrates. Binds to acidic phospholipid vesicles without affecting membrane fluidity.

3702:AT1G74850
gene id: 3702:AT1G74850
uniprot id: Q9S7Q2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PPR family. P subfamily.
messages: Involved in plastid gene expression.
messages: Lethal without exogenous carbon sources. Decrease of total chlorophyll content as well as a decrease in the chlorophyll a:b ratio. Unequally expanded grana thylakoids. Altered expression profiles of plastid genes.
messages: Mostly expressed in leaves, stems and flowers, but barely in roots.
messages: chloroplast

3702:AT4G23150
gene id: 3702:AT4G23150
uniprot id: Q8L7G3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT1G68010
gene id: 3702:AT1G68010
uniprot id: A0A178WM81
uniprot id: A0A1P8ANC0
uniprot id: Q9C9W5
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
messages: Catalyzes the NADH-dependent reduction of hydroxypyruvate into glycerate in the photorespiratory core cycle. Mediates fatty acid beta-oxidation in germinating seeds when malate dehydrogenase is absent.
messages: Induced by drought. Accumulates in response to light, but transiently repressed in darkness.
messages: Peroxisome
messages: Present in leaves (at protein level). Mostly expressed in photosynthetic tissues such as leaves, stems, flowers, buds, and, to a lower extent, in siliques and roots.
messages: Slightly inhibited by oxalate.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Very low NADH-dependent hydroxypyruvate reductase activity in leaves. Under short days, slower growth and delayed bolting. Slight accumulation of metabolites with long turnover half-times that become dissimilated during the dark. Perturbated photorespiration-related gas exchange. When associated with HPR2 disruption, strong air-sensitivity and dramatic reduction in photosynthetic performance.

3702:AT5G62820
gene id: 3702:AT5G62820
uniprot id: A0A178U8F8
uniprot id: Q501G6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT5G11190
gene id: 3702:AT5G11190
uniprot id: A0A654G036
uniprot id: Q9LFN7
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: In flowers.
messages: Nucleus
messages: Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
messages: The SHN2 gene shows a pattern of expression associated with anther and silique dehiscence. Expressed in the stomium region when tapetum degeneration is initiated in the anther. Up to anthesis and until stamens fell off the senescing flower, restricted to the anther dehiscence zone. Subsequently, when petals and sepals withered, found at the bottom of each valve. During silique development, strongly expressed along the valve margin-replum boundary.

3702:AT1G73840
gene id: 3702:AT1G73840
uniprot id: A0A178W8Y4
uniprot id: A0A1P8AMZ0
uniprot id: Q8VYM7
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G56280
gene id: 3702:AT1G56280
uniprot id: F4I522
uniprot id: Q39083
names: Domain
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Di19 family.
messages: By drought stress, but not by abscisic acid.
messages: Expressed in seedlings, roots, leaves, stems, flowers and siliques.
messages: Interacts with ADO2/LKP2, CPK11 and CPK4. Weak interaction with CPK12 and no interactions with CPK1, CPK5 or CPK26.
messages: Nucleus
messages: Phosphorylated within the NLS/NES region.
messages: The NLS/NES region (98-121) is necessary and sufficient for interaction with CPK11.

3702:AT4G23250
gene id: 3702:AT4G23250
uniprot id: A0A1P8B8K3
uniprot id: A0A1P8B8L9
uniprot id: Q8L710
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: By salicylic acid (SA).
messages: Expressed in the whole plant, but preferentially in young seedlings and rosette leaves.
messages: Membrane

3702:AT4G25140
gene id: 3702:AT4G25140
uniprot id: A0A178V1V3
uniprot id: P29525
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oleosin family.
messages: Lipid droplet
messages: May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.
messages: Membrane

3702:AT2G40710
gene id: 3702:AT2G40710
uniprot id: F4II26
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G61530
gene id: 3702:AT3G61530
uniprot id: A0A654FJS9
uniprot id: Q9M315
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PanB family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.
messages: Mitochondrion

3702:AT5G55160
gene id: 3702:AT5G55160
uniprot id: A0A178UNS2
uniprot id: F4K3D6
uniprot id: Q9FLP6
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Cytoplasm
messages: Interacts with SAE2, SCE1, SIZ1 and MMS21 (By similarity). Interacts with HSFA2. Covalently attached to ABI5, FLD, GTE3, HSFA2 and ICE1.
messages: No visible phenotype.
messages: Nucleus
messages: Stress conditions rapidly and substantially elevates the amount of SUMO1 and SUMO2 conjugates with a concomitant reduction in the amount of free SUMO proteins. The SUMO conjugation system plays an important function in stress protection and/or repair.
messages: Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Required for the massive protein sumoylation in the nucleus induced by heat shock and controlled by SIZ1.

3702:AT5G53280
gene id: 3702:AT5G53280
uniprot id: Q9FK13
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the plastid division machinery (PubMed:16998069). Required to mediate the dissociation of ARC5/DRP5B from plastid outer envelope membranes (OEMs) at the midplastid constriction site in the cytoplasm, thus triggering ARC5/DRP5B ring turnover at the chloroplast division site (PubMed:16998069, PubMed:32005784). Binding to phosphatidylinositol 4-phosphate (PI4P) modulates negatively chloroplast division (PubMed:25736058).
messages: Expressed in young developing leaves, root tips, shoot apices, and flower buds (sepals, petals, stamens, and pistils), but not in developed tissues.
messages: Induced by gibberellic acid (GA).
messages: Interacts (via C-terminus) with CDP1/PARC6 (via C-terminus) (PubMed:26527658). Interacts with ARC5/DRP5B (PubMed:32005784).
messages: Reduced number of constricted and large chloroplasts due to a blocked plastid division (PubMed:16998069, PubMed:32005784). Accumulation of ARC5/DRP5B in the plastid outer envelope membranes (OEMs) at the midplastid constriction site in the cytoplasm (PubMed:32005784).
messages: chloroplast outer membrane

3702:AT5G63660
gene id: 3702:AT5G63660
uniprot id: A0A178UD76
uniprot id: Q9FFP8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Confers broad-spectrum resistance to pathogens.
messages: Secreted

3702:AT1G62640
gene id: 3702:AT1G62640
uniprot id: P49243
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thiolase-like superfamily. FabH family.
messages: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. KAS III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities (By similarity).
messages: chloroplast

3702:AT1G51720
gene id: 3702:AT1G51720
uniprot id: A0A1P8AW36
uniprot id: A0A1P8AW38
uniprot id: F4I9M9
names: Similarity
messages: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.

3702:AT2G29300
gene id: 3702:AT2G29300
uniprot id: A0A5S9X288
uniprot id: F4IKL5
uniprot id: Q42182
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.

3702:AT5G25260
gene id: 3702:AT5G25260
uniprot id: A0A178UAV4
uniprot id: Q4V3D6
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the band 7/mec-2 family. Flotillin subfamily.
messages: Cell membrane
messages: May act as a scaffolding protein within caveolar membranes, functionally participating in formation of caveolae or caveolae-like vesicles.
messages: May be palmitoylated.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: caveola

3702:AT4G26410
gene id: 3702:AT4G26410
uniprot id: Q84K90
names: Biotechnology
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively.
messages: Interacts with RGS1 and HXK1.
messages: Long roots in young seedlings and large inflorescences in adult plants. Arrested seedling development in response to glucose.
messages: Proposed as a reliable reference gene for normalization purposes.
messages: Required for some glucose-regulated gene expression, being a physical connection between RGS1 and HXK1 in sugar signaling. Prevents roots and inflorecences growth.

3702:AT5G48170
gene id: 3702:AT5G48170
uniprot id: Q9LUB6
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Essential component of a SCF-type E3 ligase complex that positively regulates the gibberellin signaling pathway. Upon gibberellin treatment, such complex probably mediates the ubiquitination and subsequent degradation of DELLA proteins (GAI, RGA and RGL2), some repressors of the gibberellin pathway, leading to activate the pathway. Can partially complement the absence of GID2/SLY1.
messages: Highly expressed in flowers and at much lower level in seedlings, rosette leaves and green siliques.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex. Interacts directly with SKP1A and SKP1B.

3702:AT1G31780
gene id: 3702:AT1G31780
uniprot id: Q6NMI3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the COG6 family.
messages: Component of the conserved oligomeric Golgi complex which is composed of eight different subunits and is required for normal Golgi morphology and localization (Probable). Interacts with COG5, COG7 and COG8 (PubMed:27448097).
messages: Golgi apparatus membrane
messages: Required for normal Golgi function.

3702:AT3G55254
gene id: 3702:AT3G55254
uniprot id: B3H6P2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G34030
gene id: 3702:AT1G34030
uniprot id: A0A384KT69
uniprot id: P34788
uniprot id: Q5PNZ9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Cytoplasm
messages: Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA.

3702:AT1G74340
gene id: 3702:AT1G74340
uniprot id: A0A5S9WUA9
uniprot id: Q9CA79
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DPM2 family.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex composed of DPMS1, DPMS2 and DPMS3; in the complex interacts directly with DPMS3. Associates with the GPI-GlcNAc transferase (GPI-GnT) complex.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: No visible phenotype under normal growth conditions.
messages: Regulates the biosynthesis of dolichol phosphate-mannose. Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization and stable expression of DPMS1.
messages: Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization.

3702:AT5G54750
gene id: 3702:AT5G54750
uniprot id: A0A178UUA0
uniprot id: F4K1U5
uniprot id: Q9FFV2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAPP small subunits family. BET3 subfamily.
messages: Homodimer.
messages: May play a role in vesicular transport from endoplasmic reticulum to Golgi.
messages: cis-Golgi network

3702:AT5G46330
gene id: 3702:AT5G46330
uniprot id: C0LGU8
uniprot id: Q9FL28
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: After flg22-binding, forms instantaneously a heteromeric complex with BAK1 and is transphosphorylated within 15 seconds. After activation, the receptor is internalized by endocytosis and subject to degradation.
messages: Autophosphorylated. The phosphorylated form is essential in the perception of flagellin. Dephosphorylated by KAPP. Autophosphorylation is inhibited by the binding with avrPto1.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Both extracellular leucine-rich repeats and protein kinase domains are required for flg22-binding. The LRR 9 to LRR 15 domains are involved in flg22-binding.
messages: Cell membrane
messages: Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 or to the phosphatase hopD2 from Pseudomonas syringae blocks the downstream plant immune response.
messages: Endosome membrane
messages: Heterodimer with SERK3/BAK1 (PubMed:24114786, PubMed:17626179, PubMed:20103591, PubMed:21693696, Ref.32). The activation by flagellin (flg22) induces the dissociation of the complex with SERK3/BAK1 (Ref.32, PubMed:20413097). Interacts with KAPP. Does not form homodimer. Interacts with SERK3/BAK1, SERK4/BKK1, SERK1 and SERK2 in a specific ligand-induced manner. Interacts with P.syringae AvrPto1, AvrPtoB and (via the kinase and cytoplasmic domains) hopD2. Component of large complexes containing, at least, FLS2 and ACD6 in endoplasmic reticulum and plasma membrane (PubMed:24923602). Interacts with MORC1/CRT1 (PubMed:23250427). Interacts with PBS1, BIK1, PBL1 and PBL2 (PubMed:20413097). Interacts with RBOHD (PubMed:24629339). Binds to IOS1 which triggers FLS2-BAK1 complex formation upon microbe-associated molecular patterns (MAMPs) treatment (PubMed:27317676). Interacts with PCRK1 and PCRK2 (PubMed:27208222). Interacts with BSK1 (PubMed:23532072). Interaction with BSK8 (PubMed:21726371).
messages: Impaired BIK1 pathogen-associated molecular patterns (PAMPs e.g. flg22)-induced ubiquitination.
messages: Polyubiquitinated at the kinase domain mediated by P.syringae AvrPtoB.
messages: Repressed upon infection with the P.syringae virulent DC3000 strain, in a flg22- and avrPtoB-dependent manner (at protein level).
messages: Ubiquitously expressed.

3702:AT4G30550
gene id: 3702:AT4G30550
uniprot id: A0A178V361
uniprot id: Q9M0A5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C26 family.
messages: Involved in glucosinolate biosynthesis. Hydrolyzes the gamma-glutamyl peptide bond of several glutathione (GSH) conjugates to produce Cys-Gly conjugates related to glucosinolates. The gamma-Glu-Cys-Gly-GSH conjugates are the sulfur-donating molecule in glucosinolate biosynthesis. Can use the GSH conjugate of the camalexin intermediate IAN (GS-IAN) as substrate. Required for the biosynthesis of camalexin, a pathogen-inducible phytoalexin with antibacterial and antifungal properties.
messages: cytosol

3702:AT1G59540
gene id: 3702:AT1G59540
uniprot id: B3H7L9
uniprot id: Q9S7P3
names: Caution
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3702:AT5G11800
gene id: 3702:AT5G11800
uniprot id: A0A178UL54
uniprot id: B5X0N6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. KEA (TC 2.A.37.1) subfamily.
messages: Down-regulated by high K(+).
messages: Expressed in shoots and roots.
messages: K(+)/H(+) antiporter involved in K(+) homeostasis and osmotic adjustment.
messages: Membrane

3702:AT4G20550
gene id: 3702:AT4G20550
uniprot id: P0CJ60
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT5G11460
gene id: 3702:AT5G11460
uniprot id: Q9LYE4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FLZ family.
messages: Cytoplasm
messages: Early expressed in hypocotyl and cotyledon and preferentially in the stelar region of the shoot and root. Later expressed in root-shoot junction, lateral root, old or senescing leaves and in pistil and pollen of flower buds or open flowers.
messages: Endoplasmic reticulum
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:24600465, PubMed:29945970, PubMed:29406622). Interacts with KINB1, KINB2 and KINB3 via its N-terminal part (PubMed:29945970). Forms homodimer and heterodimer with FLZ2 and FLZ12 in vitro (PubMed:29945970).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway (PubMed:24600465). Negatively regulates KIN10 leading to a repression of the SnRK1 signaling pathway (PubMed:29406622).
messages: Nucleus
messages: Reduced biomass and lateral roots and shorter primary roots.
messages: Up-regulated in response to mild as well as prolonged energy depletion (PubMed:26442059, PubMed:29406622). Up-regulated by the glycolysis inhibitor 2DG (PubMed:29406622). Induced by NaCl (PubMed:26442059). Induced by abscissic acid (ABA) (PubMed:29406622).

3702:AT4G29620
gene id: 3702:AT4G29620
uniprot id: A0A5S9XXD9
uniprot id: O65571
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

3702:AT2G31215
gene id: 3702:AT2G31215
uniprot id: F4IQQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bHLH protein family.
messages: Nucleus

3702:AT2G03830
gene id: 3702:AT2G03830
uniprot id: Q9SI57
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Golven' means irregular waves in Dutch.
messages: Altered PIN2 traffic.
messages: Belongs to the RGF family.
messages: Binds to LRR receptor-like serine/threonine-protein kinases to trigger their dimerization with SERK proteins and subsequent signaling.
messages: Expressed in roots, shoots, flowers and stamens.
messages: In roots, present in both the quiescent center (QC) and the root apical meristem (RAM); within the meristem, mainly present in the cortex but also in the epidermal and procambial cells closest to the QC, with very strong levels in the initials surrounding the QC (PubMed:23370719). Also present in the QC, and the first and second columella cells (CC) layers (PubMed:23370719). Induced early during lateral root formation (PubMed:23370719). Detected in the vasculature of cotyledons and leaves (PubMed:23370719). In the shoot apical meristem (SAM), present at the border between the meristem and the leaf primordia (PubMed:23370719). In flowers, accumulates in the vasculature of sepals, stamens, and petals as well as at the tip of the gynoecium and later in the siliques (PubMed:23370719).
messages: Secreted
messages: Signaling peptide (root growth factor) required during root gravitropism in a PIN2-traffic dependent manner (PubMed:23370719). May be involved in maintaining the postembryonic root stem cell niche (PubMed:20798316). Root growth factor that regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (By similarity).

3702:AT3G19090
gene id: 3702:AT3G19090
uniprot id: Q9LHL3
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcriptional regulator.

3702:AT3G13065
gene id: 3702:AT3G13065
uniprot id: Q6R2K2
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a direct positive regulator of leaf size but not leaf shape.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cannot functionally replace STRUBBELIG.
messages: Expressed in seedlings, roots, stems, leaves, flowers and siliques.
messages: Membrane
messages: Over-expression of SRF4 led to an increased leaf surface and to male-sterility in both cv. Landsberg and cv. Columbia.
messages: Plants show a reduction in leaf size, but no apparent defect in pollen development or fertility.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT4G01250
gene id: 3702:AT4G01250
uniprot id: A0A178V251
uniprot id: O04609
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Acts downstream a MAPK cascade and therefore might be regulated by phosphorylation. WRKY 22 and WRKY 29 may provide redundant functions.
messages: Belongs to the WRKY group II-e family.
messages: Induced after flagellin treatment.
messages: Nucleus
messages: Transcription factor involved in the expression of defense genes in innate immune response of plants. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates WRKY 29, SIRK and its own promoters.

3702:AT2G05940
gene id: 3702:AT2G05940
uniprot id: Q9ZUF4
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated (PubMed:21320696, PubMed:22504181). Autophosphorylation is reduced in presence of the Xanthomonas campestris effector XopAC/AvrAC (PubMed:22504181).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Induced by the microbe-associated molecular pattern (MAMP) flagellin (flg22) (PubMed:15181213). Induced by the Pseudomonas syringae effectors AvrB and AvrRpm1 (PubMed:21320696). Induced by 12-oxo-phytodienoic acid (OPDA) (PubMed:16258017). Down-regulated by UV-B (PubMed:17587374).
messages: Interacts with the Pseudomonas syringae effector AvrB (PubMed:21320696). Interacts with RIN4 (PubMed:21320696). Interacts with the Xanthomonas campestris effector XopAC/AvrAC (PubMed:22504181, PubMed:23951354).
messages: Reduced leaf width. Enhanced disease resistance to the bacterial pathogen Pseudomonas syringae pv. tomato.
messages: Serine/threonine-protein kinase involved in disease resistance. During Pseudomonas syringae infection, and in response to the bacterial effectors AvrB and AvrRpm1, RIPK phosphorylates the host target RIN4, which subsequently activates RPM1-dependent effector-triggered immunity (ETI) (PubMed:21320696, PubMed:25625821). Seems to act as negative regulator of plant basal defense responses and may play a role in pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) (PubMed:21320696). Required for the bacterial XopAC/AvrAC effector-triggered immunity against Xanthomonas campestris (PubMed:23951354).
messages: Uridylylated at Ser-251 and Thr-252 by the Xanthomonas campestris effector XopAC/AvrAC. This conceals conserved phosphorylation sites in the activation loop, reducing RIPK kinase activity and consequently inhibiting downstream signaling.

3702:AT3G26180
gene id: 3702:AT3G26180
uniprot id: F4JBF0
uniprot id: Q9LTM3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G30620
gene id: 3702:AT1G30620
uniprot id: Q9SA77
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a UDP-D-xylose 4-epimerase but lacks both UDP-D-glucose and UDP-D-glucuronic acid 4-epimerase activities in vitro.
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Golgi stack membrane
messages: High expression in roots. Also found in leaves, stems, flowers, and siliques.

3702:AT3G19240
gene id: 3702:AT3G19240
uniprot id: A0A384LQM2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G54730
gene id: 3702:AT1G54730
uniprot id: A0A178WPK5
uniprot id: A0A1P8AWA4
uniprot id: A0A1P8AWA9
uniprot id: A0A1P8AWE1
uniprot id: A0A1P8AWE2
uniprot id: A0A1P8AWE3
uniprot id: A0A2H1ZED1
uniprot id: A0A384LAL3
uniprot id: A0A384LEZ5
uniprot id: A0A654EJX8
uniprot id: Q3ECP7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02740
gene id: 3702:AT1G02740
uniprot id: A0A5S9S9A6
uniprot id: Q4V3E2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Chromatin remodeling factor. Acts as a 'reader' protein by binding to H3K4me3 and H3K36me3 to control histone H4 acetylation. Increases the transcriptional levels of the flowering time genes FLC and FT (PubMed:25183522, PubMed:25211338). Binds the chromatin at the FT promoter upon interaction with CO (PubMed:25211338).
messages: Interacts with HAM1 and HAM2 (PubMed:25183522). Interacts (via MRG domain) with CO (PubMed:25211338). Component of the NuA4 histone acetyltransferase complex (By similarity).
messages: No visible phenotype, due to the redundancy with MRG1. Mrg1 and mrg2 double mutants are late-flowering under long-day growth conditions.
messages: Nucleus
messages: Ubiquitous (PubMed:25183522). Mainly expressed in the vasculature of cotyledons and leaves, and in roots and inflorescences (PubMed:25211338).

3702:AT5G57010
gene id: 3702:AT5G57010
uniprot id: A0A178UNG2
uniprot id: Q058N0
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cytoplasm
messages: Down-regulated by salt stress and treatment with mannitol.
messages: Expressed in roots, rosette and cauline leaves, and at lower levels in stems, flowers and siliques.
messages: May be involved in biotic and abiotic stress responses.
messages: Nucleus

3702:AT1G16040
gene id: 3702:AT1G16040
uniprot id: A0A1P8APF0
uniprot id: A0A1P8APH0
uniprot id: A0A1P8APM1
uniprot id: A0A654EC98
uniprot id: Q8GWH6
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G41830
gene id: 3702:AT1G41830
uniprot id: A0A178W7S3
uniprot id: F4I7X1
names: Caution
names: Similarity
messages: Belongs to the multicopper oxidase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G01360
gene id: 3702:AT2G01360
uniprot id: Q9ZU31
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G24160
gene id: 3702:AT5G24160
uniprot id: A0A1P8BA09
uniprot id: A0A1P8BA10
uniprot id: O65402
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the squalene monooxygenase family.
messages: Catalyzes the stereospecific oxidation of squalene to (S)-2,3-epoxysqualene, and is considered to be a rate-limiting enzyme in steroid biosynthesis.
messages: Expressed in seedlings, leaves, stems, inflorescences and siliques.
messages: Membrane

3702:AT3G05675
gene id: 3702:AT3G05675
uniprot id: A0A178VMR2
uniprot id: Q8RX01
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT3G47110
gene id: 3702:AT3G47110
uniprot id: Q9SD62
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT2G44120
gene id: 3702:AT2G44120
uniprot id: A0A178VVS2
uniprot id: A0A5S9X6W7
uniprot id: F4IT48
uniprot id: P60039
names: Similarity
messages: Belongs to the universal ribosomal protein uL30 family.

3702:AT5G60280
gene id: 3702:AT5G60280
uniprot id: A0A654GDC4
uniprot id: Q9LSR9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the fungus Alternaria brassicicola.
messages: Involved in resistance response to the pathogenic fungus Alternaria brassicicola.

3702:AT3G27970
gene id: 3702:AT3G27970
uniprot id: B3LFC1
names: Similarity
messages: Belongs to the REXO4 family.

3702:AT4G14510
gene id: 3702:AT4G14510
uniprot id: F4JVH1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds specific group II introns in chloroplasts and facilitates their splicing (PubMed:18799595, PubMed:32143506). Exhibits non-specific action during plastid rRNA biogenesis; RFC3 prevents unaccurate splicing to improve the accuracy of plastid rRNA processing (PubMed:32143506). Acts on subgroup IIB introns (PubMed:18799595). The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3B and CAF1 or CAF2 (PubMed:18799595). Required for seed development (PubMed:18799595).
messages: Expressed at low levels in roots and shoots.
messages: Interacts with RNA (By similarity). Part of large ribonucleo-protein particles that contain CAF1 and/or CAF2, and RNC1 (By similarity). Interacts with RFC3 in plastids (PubMed:32143506).
messages: No visible phenotype under normal growth conditions, but the seeds of the double mutant plants cfm3a-4 and cfm3b-2 fail to germinate (PubMed:18799595). The double mutant rfc3-2 sprt2-1 is rescued for primary and lateral root development, intracellular distributions of plastids in roots, as well as for plastid rRNA level compared to the single mutant rfc3-2 (PubMed:32143506).
messages: Plastid
messages: chloroplast

3702:AT2G39970
gene id: 3702:AT2G39970
uniprot id: A0A178VUN6
uniprot id: O04200
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Expressed in cotyledons, hypocotyls, vascular tissues, trichomes, hydathodes, seeds, pedicels, flowers and stigma.
messages: Glyoxysome membrane
messages: Homodimer.
messages: Inhibited by pyridoxal 5'-phosphate, bathophenanthroline, tannic acid, mersalyl, mercuric chloride and bromocresol purple.
messages: Mediates the NAD(+) import into peroxisomes. Favors the NAD(+)(in)/AMP(out) antiport exchange, but is also able to catalyze a low unidirectional transport that might be essential under special conditions. Transports CoA, dephospho-CoA, acetyl-CoA, adenosine 3',5'-diphosphate (PAP), NAD(+), AMP, ADP and NADH, but has no activity with ATP, GTP, GDP, NADPH, NADP(+) or FAD. Required for peroxisomes proliferation.
messages: Membrane
messages: No germination or growth inhibition, but delayed storage oil mobilization. Decreased sensitivity to 4-(2,4-dichlorophenoxy)butanoic acid (2,4-DB), a precursor converted in vivo by beta-oxidation into the herbicide 2,4-dichlorophenoxyacetic acid (2,4-D). Enlarged peroxisomes.
messages: Was originally thought to be an adenine nucleotide carrier.

3702:AT1G05640
gene id: 3702:AT1G05640
uniprot id: A0A5S9SSN9
uniprot id: Q9SYK5
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G54110
gene id: 3702:AT5G54110
uniprot id: A0A1P8BD09
uniprot id: A0A5S9YDT8
uniprot id: Q1ECE0
names: Function
names: Induction
names: Similarity
messages: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17) family.
messages: By treatment with mannitol.
messages: May play a role in vesicle trafficking.

3702:AT5G26920
gene id: 3702:AT5G26920
uniprot id: A0A1P8BEE3
uniprot id: A0A654G586
uniprot id: F4K2R6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Interacts with V.dahliae SCP41; the interaction is direct and inhibits CBP60G.
messages: Belongs to the plant ACBP60 protein family.
messages: Expressed in seedlings, roots, leaves, inflorescences and flowers, and, to a lower extent, in siliques. Particularly present in guard cells.
messages: In seedlings, present in roots, except in tips, leaves and petioles. In inflorescence and flowers, accumulates in sepals, carpels (e.g. styles and floral nectars) and stamens (e.g. filaments and vascular tissue of anthers), but not in petals or stigma.
messages: Induced rapidly by pathogenic bacteria Pseudomonas syringae pv. maculicola ES4326 and P. syringae pv. tomato DC3000, by the root-colonizing endophytic plant growth-promoting fungus Piriformospora indica, and by microbe-associated molecular patterns (MAMPs) such as flg22 and hrcC in both local and systemic leaves in both local and systemic leaves (PubMed:20921422, PubMed:19214217, PubMed:23153277, PubMed:23118477). Accumulates transiently in response to 12-oxo-phytodienoic acid (OPDA) (PubMed:16258017).
messages: Interacts with calmodulin (CaM) in the presence of calcium ions; this interaction is required for defense responses.
messages: Nucleus
messages: Reduced basal resistance to Pseudomonas syringae pv. maculicola ES4326 and P. syringae pv. tomato DC3000. Impaired systemic acquired resistance (SAR) induced by P. syringae toward Hyaloperonospora arabidopsidis Noco2. Plants lacking both SARD1 and CBP60G fail to accumulate salicylic acid (SA) and to express PR1 and SID2 upon both biotic and abiotic stresses.
messages: Transcription activator that binds DNA in a sequence-specific manner, 5'-GAAATTTTGG-3', to promote the expression of target genes (PubMed:20921422, PubMed:21615571, PubMed:23153277, PubMed:29757140). Recruited to the promoter of ICS1 and other defense-related genes (e.g. PR1, PR2 and EDS5) in response to both biotic (e.g. Pseudomonas syringae pv. maculicola ES4326, P. syringae pv. tomato DC3000, and microbe-associated molecular patterns (MAMPs) such as flg22) and abiotic stresses (e.g. UV-B, drought and abscisic acid), thus triggering rapid defense responses by stimulating salicylic acid (SA) biosynthesis. Involved in basal and systemic acquired resistance to P. syringae and Hyaloperonospora arabidopsidis (PubMed:20921422, PubMed:21615571, PubMed:22466450, PubMed:19214217). Mediates resistance to drought and sensitivity to abscisic acid (ABA), especially for ABA-mediated signaling process that regulates early seedling growth (PubMed:22466450).

3702:AT2G13640
gene id: 3702:AT2G13640
uniprot id: Q9SIT3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G47640
gene id: 3702:AT5G47640
uniprot id: A0A178UPH7
uniprot id: Q9FGJ3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex (By similarity). The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity).
messages: Enhanced by dehydration stress.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC (PubMed:33098724). NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (PubMed:33098724). Binds directly with DPB3-1 (PubMed:25490919).
messages: Nucleus
messages: Ubiquitous. Predominantly expressed in flowers and siliques.

3702:AT1G11100
gene id: 3702:AT1G11100
uniprot id: A0A1P8AM17
uniprot id: A0A1P8AM22
uniprot id: C0SUU4
uniprot id: F4I7D2
uniprot id: F4I7D3
names: Similarity
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.

3702:AT5G59100
gene id: 3702:AT5G59100
uniprot id: A0A654GCF6
uniprot id: Q9FGU3
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: The C-terminal propeptide is autocleaved.

3702:AT5G04500
gene id: 3702:AT5G04500
uniprot id: Q84WB7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 64 family.
messages: Glycosyltransferase that mediates the glycosylation of glycosylinositol phosphorylceramides (GIPCs), the major sphingolipids in the plasma membrane; acts as a HexN(Ac)-specific GIPC sugar transferase and accepts glucosamine (GlcN) and N-acetylglucosamine (GlcNAc) as the sugar unit (PubMed:29760197). Responsible for the glycosylation of a subgroup of GIPCs found in seeds and pollen that contain GlcNAc and GlcN (GlcN(Ac)) (PubMed:29760197). Maybe involved in the maintenance of cell-cell adhesion (PubMed:29760197).
messages: Highly expressed in dry seed but drastically down-regulated after seed imbibition.
messages: Loss of the GlcN(Ac) glycosylinositol phosphorylceramides (GIPCs) leading to a reduced sensitivity to abiotic stress (e.g. abscisic acid and salt) on seed germination. Reduced HexNAc-GIPC content. Slightly larger seeds with more seed storage lipids and proteins and larger seed coat cells.
messages: Membrane
messages: Specifically and highly expressed in developing embryos and mature seeds. Also detected at low levels in stigma and pollen.

3702:AT4G28500
gene id: 3702:AT4G28500
uniprot id: O49459
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in protoxylem and elongating interfascicular fiber cells of elongating internodes, developing metaxylem cells and interfascicular fibers of non-elongating internodes and developing secondary xylem of roots.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777).

3702:AT3G13222
gene id: 3702:AT3G13222
uniprot id: Q8VZS6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GIP1 family.
messages: Expressed in roots, leaves, stems and flowers.
messages: Monomer, homodimer, homooligomer. Under non-reducing conditions, predominantly present in high molecular weight forms, but predominates in low molecular weight monomers under reducing conditions (PubMed:25387999). Interacts with BZIP16, BZIP68 and GBF1 (PubMed:25387999). Interacts with LBD18 (PubMed:24484953).
messages: Nucleus
messages: Plant specific protein that enhances G-box-binding factor (GBF) DNA binding activity. May function as a nuclear chaperone or lever and regulate the multimeric state of GBFs. May contribute to bZIP-mediated gene regulation. Is able to refold denatured rhodanese in vitro (PubMed:16117846, PubMed:25387999). Reduces DNA-binding activity of BZIP16, BZIP68 and GBF1 under non-reducing conditions through direct physical interaction. Acts as negative co-regulator in red and blue light-mediated hypocotyl elongation. Functions to promote hypocotyl elongation during the early stages of seedling development by regulating the repression effect by BZIP16 and the activation effect by BZIP68 and GBF1 on LHCB2.4 expression (PubMed:25387999). Enhances transcriptional activity of LBD18 in the EXP14 promoter. May act as a transcriptional coactivator of LBD18 (PubMed:24484953).

3702:AT1G09330
gene id: 3702:AT1G09330
uniprot id: A0A1P8ANI1
uniprot id: A0A384LL91
uniprot id: Q8LEK2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TVP23 family.
messages: Component of a trans-Golgi network (TGN)-localized ECH/YIP4 complex made of ECH, YIP4A and YIP4B (PubMed:23832588). Interacts directly with YIP4A and YIP4B (PubMed:23832588).
messages: Early endosome membrane
messages: Golgi apparatus membrane
messages: Golgi membrane protein involved in vesicular trafficking.
messages: Mediates trans-Golgi-network trafficking and cell elongation (PubMed:21512130, PubMed:23832588). Required for keeping the appropriate balance between secretory trafficking and vacuolar targeting of a subset of proteins (PubMed:21512130). The ECH/YIP4 complex is involved in the modulation of the trans-Golgi network (TGN)-mediated trafficking of some proteins and cell wall components (e.g. pectin and hemicellulose) to the cell wall in dark-grown hypocotyls and in secretory cells of the seed coat (PubMed:23832588).
messages: Membrane
messages: Severe size reduction of all organs (PubMed:21512130, PubMed:23832588). Abnormal cell wall composition (PubMed:23832588).
messages: trans-Golgi network membrane

3702:AT1G08750
gene id: 3702:AT1G08750
uniprot id: A0A178WNN3
uniprot id: Q8GYI6
names: Function
names: Similarity
messages: Belongs to the peptidase C13 family.
messages: Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

3702:AT1G66420
gene id: 3702:AT1G66420
uniprot id: Q9C517
names: Similarity
messages: Belongs to the GeBP family.

3702:AT3G01610
gene id: 3702:AT3G01610
uniprot id: A0A178V5U0
uniprot id: Q9SS94
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family.
messages: Nucleus
messages: Probably functions in cell division and growth processes. Interacts with certain SNAREs as part of specialized membrane fusion events where vesicles from the same organelle fuse (homotypic fusion) (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: phragmoplast

3702:AT3G25600
gene id: 3702:AT3G25600
uniprot id: Q9LI84
names: Caution
names: Function
names: Induction
messages: Although assigned as a calmodulin family member by Ref.5, it only contains EF-hand domains.
messages: By touch and during darkness conditions.
messages: Potential calcium sensor.

3702:AT4G27020
gene id: 3702:AT4G27020
uniprot id: A0A178V3G5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G65870
gene id: 3702:AT5G65870
uniprot id: Q9FEB4
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phytosulfokine family.
messages: Expressed in stems, roots, mature leaves and flowers. Most abundant in vascular bundles.
messages: PSK-beta is an enzymatic derivative of PSK-alpha.
messages: Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation (By similarity). May be involved in the low quiescent center cell proliferation.
messages: Secreted
messages: Sulfation is important for activity and for the binding to a putative membrane receptor.
messages: Up-regulated by ERF115, by brassinosteroid treatment, wounding and fungal infection.

3702:AT2G41180
gene id: 3702:AT2G41180
uniprot id: O80669
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By infection with the necrotrophic fungal pathogen B.cinerea.
messages: Functions as activator of WRKY33 in plant defense against necrotrophic pathogens by stimulating the DNA-binding activity of WRKY33.
messages: Interacts with sigma factors in chloroplast (By similarity). Interacts with WRKY33 in the nucleus (PubMed:21990940).
messages: No visible phenotype under normal growth conditions, but mutant plants have increased susceptibility to the necrotrophic fungal pathogen B.cinerea.
messages: Nucleus
messages: chloroplast

3702:AT1G52230
gene id: 3702:AT1G52230
uniprot id: A0A178WML3
uniprot id: Q9SUI6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the psaH family.
messages: Membrane
messages: Possible role could be the docking of the LHC I antenna complex to the core complex.
messages: chloroplast thylakoid membrane

3702:AT5G23270
gene id: 3702:AT5G23270
uniprot id: Q9FMX3
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Cell membrane
messages: Inhibited by uncouplers such as 2,4-dinitrophenol and carbonyl cyanide-m-chlorophenyl-hydrazone.
messages: Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Can transport glucose, galactose, mannose, xylose and 3-O-methylglucose, but not fructose and ribose.
messages: Specifically expressed in germinating pollen and pollen tube (at protein level).

3702:AT5G52780
gene id: 3702:AT5G52780
uniprot id: Q9LTD9
names: Disruption Phenotype
names: Miscellaneous
names: Subcellular Location Annotation
messages: Has no redundant functions with PAM68.
messages: Membrane
messages: No visible phenotype.

3702:AT2G01060
gene id: 3702:AT2G01060
uniprot id: A0A178VZU9
uniprot id: Q9SJW0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MYB-CC family.
messages: Nucleus

3702:AT5G15110
gene id: 3702:AT5G15110
uniprot id: Q9LFP5
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT3G43660
gene id: 3702:AT3G43660
uniprot id: Q9M2C0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CCC1 family.
messages: Not down-regulated under iron deficiency.
messages: Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.
messages: Vacuole membrane

3702:AT5G26660
gene id: 3702:AT5G26660
uniprot id: Q8LPH6
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in stems, flowers and seeds. Weakly expressed in leaves and roots.
messages: Nucleus
messages: Probable transcription factor.

3702:AT2G45220
gene id: 3702:AT2G45220
uniprot id: O22149
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed during late developmental phases of siliques.
messages: Expressed in siliques.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT4G15020
gene id: 3702:AT4G15020
uniprot id: F4JJC1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G15630
gene id: 3702:AT4G15630
uniprot id: A0A178UYN3
uniprot id: Q8L8Z1
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G27130
gene id: 3702:AT2G27130
uniprot id: A0A178W142
uniprot id: Q9ZVC7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Membrane
messages: Preferentially expressed in the endodermis of hypocotyls and roots of seedlings, and in petals and anthers of inflorescences (PubMed:21558309). May also be expressed in siliques, carpels and pedicels (PubMed:21558309).
messages: Probable lipid transfer protein.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G24990
gene id: 3702:AT4G24990
uniprot id: A0A178V221
uniprot id: Q9SW27
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cell membrane
messages: Heat stable and remains soluble at temperatures exceeding 90 degrees Celsius.
messages: May serve as docking site to facilitate the association of other proteins to the plasma membrane.
messages: Membrane
messages: Not induced by pathogens, cycloheximide and ozone treatment.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous, but three fold higher expression in senescing leaves.

3702:AT5G19260
gene id: 3702:AT5G19260
uniprot id: A0A178UAG1
uniprot id: Q6NMR8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Able to repress WUS when constitutively overexpressed, but have no effect on CLV3.
messages: Belongs to the fantastic four family.
messages: Expressed in the shoot apex, stamens, young leaves and young siliques, but not in old leaves. Detected in provascular and vascular tissue, but not in the vegetative meristem. In inflorescences, restricted to the vasculature and absent from young flowers, except from anthers.
messages: Expressed throughout development. Decreased expression in the shoot apex during the transition to flowering. Expressed in developing embryos from the early heart stage until torpedo stage.
messages: No visible phenotype; due to the redundancy with other FAF genes.

3702:AT2G24625
gene id: 3702:AT2G24625
uniprot id: Q2V460
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G45330
gene id: 3702:AT2G45330
uniprot id: A0A178VNZ3
uniprot id: F4IW51
uniprot id: F4IW52
names: Function
names: Similarity
messages: Belongs to the KptA/TPT1 family.
messages: Catalyzes the last step of tRNA splicing, the transfer of the splice junction 2'-phosphate from ligated tRNA to NAD to produce ADP-ribose 1''-2'' cyclic phosphate.

3702:AT1G29810
gene id: 3702:AT1G29810
uniprot id: A0A1P8AWX1
uniprot id: Q6QJ72
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pterin-4-alpha-carbinolamine dehydratase family.
messages: Involved in tetrahydrobiopterin biosynthesis (By similarity). Possesses pterin-4-alpha-carbinolamine dehydratase activity when expressed in a bacterial heterolgous system (PubMed:18245455).
messages: Mitochondrion

3702:AT1G65780
gene id: 3702:AT1G65780
uniprot id: A0A178W8G1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G48350
gene id: 3702:AT3G48350
uniprot id: A0A1I9LSH0
uniprot id: Q9STL5
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase C1 family.
messages: Endoplasmic reticulum
messages: Expressed during silique development, but limited to the carpels and the pedicel.
messages: Expressed in roots, stems, flowers, buds, green siliques, trichomes and near the stomata of cotyledons but not of true leaves. Found at the hypocotyl-root transition zone, in the vascular tissue, along primary and lateral roots, but not in root tips. Never found in the abscission zone of flower organs.
messages: Involved in the final stage of developmental programmed cell death and in intercalation of new cells. Cleaves extensins, thus probably supporting the final cell collapse.

3702:AT1G67130
gene id: 3702:AT1G67130
uniprot id: Q3ECH0
names: Miscellaneous
messages: Incomplete sequence.

3702:AT4G08300
gene id: 3702:AT4G08300
uniprot id: A0A5S9XQE1
uniprot id: Q501F8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT3G27680
gene id: 3702:AT3G27680
uniprot id: A0A654FBD6
uniprot id: Q9LVX2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G07910
gene id: 3702:AT1G07910
uniprot id: Q0WL81
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Abnormal auxin responses leading to altered root physiology (e.g. elongation, meristem morphology and gravitropism) and aberrations in cotyledon number and venation. At later developmental stages, reduced apical dominance and aberrations in lateral organ positioning at inflorescence stems.
messages: Belongs to the TRL1 family.
messages: Cytoplasm
messages: During lateral root formation, already visible in stage I lateral root primordia, and accumulates at strong levels during later stages of root development.
messages: Essential component of stress-response pathways entailing repair of RNA breaks with 2',3'-cyclic phosphate and 5'-OH ends (PubMed:23515942). Tri-functional enzyme that repairs RNA breaks with 2',3'-cyclic-PO(4) and 5'-OH ends. The ligation activity requires three sequential enzymatic activities: opening of the 2'3'-cyclic phosphodiester bond of the 5' half-tRNA leaving a 2'-phosphomonoester (CPDase activity), phosphorylation of the 5' terminus of the 3' half-tRNA in the presence of ATP (kinase activity) and ligation of the two tRNA halves in an ATP-dependent reaction (ligase activity) (PubMed:24554441, PubMed:23515942). Deficient in transferring AMP to pRNA(OH) to form AppRNA(OH) but proficient at sealing pre-adenylylated AppRNA(OH) (PubMed:23515942). CPDase and kinase reactions are almost insensitive to RNA length, whereas the ligase activity decreases with shorter RNA size. Can also splice DNA ended by a single 3'-terminal ribonucleoside 2',3'-cyclic-PO(4) (PubMed:24554441). Binds to mRNA, mature and immature (PubMed:20844078). Exhibits tRNA ligase activity in vitro (PubMed:15653639, PubMed:24554441). Required for the splicing of precursor tRNA molecules containing introns (PubMed:16428247, PubMed:20844078). Can circularize an intron cleaved from a pre-tRNA by splicing endonuclease in vitro (PubMed:20844078). Seems not involved in unfolded protein response (UPR) in the endoplasmic reticulum (PubMed:20844078). Involved in auxin signaling and polar transport during organ morphogenesis (PubMed:25892242).
messages: Has three domains each corresponding to an enzymatic activity, namely in N- to C-terminal order: ligase, kinase and cyclic phosphodiesterase (CPDase).
messages: Mainly expressed in proliferating cells and tissues such as root meristems, the vasculature of developing plantlets, flowers and elongating tissue.
messages: Nucleus
messages: Requires the presence of Mg(2+) to exhibit tRNA ligase activity.
messages: Requires the presence of NTP, preferentially ATP rather than dATP, UTP, CTP and GTP, respectively, to mediate ribonucleotide 5'-phosphorylation.

3702:AT2G02000
gene id: 3702:AT2G02000
uniprot id: Q9ZPS4
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the group II decarboxylase family.
messages: Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity).
messages: Expressed at low levels in siliques.
messages: Homohexamer. Interacts with calmodulin (By similarity).

3702:AT1G30040
gene id: 3702:AT1G30040
uniprot id: A0A178WMY6
uniprot id: Q9XFR9
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Converts GA9/GA20 to GA51/GA29 and GA4/GA1 to GA34/GA8.
messages: Preferentially expressed in flowers, siliques, and upper stems. Expressed in cotyledons, at the base of the shoot apical meristem and developing leaf primordia.
messages: Up-regulated by cytokinin, auxin, paclobutrazol and gibberellin A3 (GA3).

3702:AT2G23230
gene id: 3702:AT2G23230
uniprot id: O22184
names: Cofactor
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT3G49070
gene id: 3702:AT3G49070
uniprot id: A0A1I9LNT4
uniprot id: Q9SMU4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0496 family.
messages: Membrane

3702:AT3G21800
gene id: 3702:AT3G21800
uniprot id: Q9LSY4
uniprot id: W8Q6R8
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses low quercetin 3-O-glucosyltransferase and 4'-O-glucosyltransferase activities in vitro.

3702:AT3G06760
gene id: 3702:AT3G06760
uniprot id: A0A654F4S1
uniprot id: F4JC45
uniprot id: Q8VXU6
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Di19 family.
messages: By salt stress, but not by abscisic acid.
messages: Expressed in seedlings, roots, leaves, stems, flowers and siliques.
messages: Phosphorylated in vitro by CPK3 or CPK11.
messages: perinuclear region

3702:AT3G14390
gene id: 3702:AT3G14390
uniprot id: Q949X7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.
messages: Homodimer.
messages: Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.
messages: chloroplast

3702:AT1G11880
gene id: 3702:AT1G11880
uniprot id: A0A1P8AMX4
uniprot id: A0A1P8AMX6
uniprot id: Q6NKT6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PIGV family.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis.
messages: Membrane

3702:AT1G10980
gene id: 3702:AT1G10980
uniprot id: A0A7G2DRX2
uniprot id: O04088
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G67940
gene id: 3702:AT1G67940
uniprot id: Q9C9W0
names: Similarity
messages: Belongs to the ABC transporter superfamily. ABCI family.

3702:AT5G11110
gene id: 3702:AT5G11110
uniprot id: A0A654G0P2
uniprot id: Q9FY54
uniprot id: W8QNB0
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activity is regulated by phosphorylation and moderated by concentration of metabolites and light.
messages: Belongs to the glycosyltransferase 1 family.
messages: Expressed in roots, cauline leaves, flower buds, flowers and anthers. Highly expressed in maturing nectaries.
messages: Homodimer or homotetramer.
messages: Loss of nectar secretion accompanied by starch accumulation in nectaries.
messages: Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation.
messages: Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Required for nectar secretion.

3702:AT3G15580
gene id: 3702:AT3G15580
uniprot id: A0A178VBL7
uniprot id: Q9LRP7
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG8 family.
messages: Constitutively expressed.
messages: Gly-115 forms then a thioester bond with the 'Cys-558' of ATG7 (E1-like activating enzyme) before being transferred to the 'Cys-258' of ATG3 (the specific E2 conjugating enzyme), in order to be finally amidated with phosphatidylethanolamine. This lipid modification anchors ATG8 to autophagosomes.
messages: Interacts with ATG4 (By similarity). Interacts with NBR1 (PubMed:21606687).
messages: Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
messages: Vacuole membrane
messages: autophagosome membrane
messages: cytoskeleton

3702:AT4G35460
gene id: 3702:AT4G35460
uniprot id: A0A654FVT6
uniprot id: Q39243
names: Cofactor
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Mitochondrion
messages: NADPH-dependent thioredoxin-disulfide reductase that reduces thioredoxins O1, O2 and F3.
messages: Sequencing errors.
messages: The active site is a redox-active disulfide bond.
messages: Ubiquitous.

3702:AT4G25870
gene id: 3702:AT4G25870
uniprot id: Q9SVZ8
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G06800
gene id: 3702:AT1G06800
uniprot id: Q941F1
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acylhydrolase with a broad specificity. Catalyzes the hydrolysis of phosphatidylcholine at the sn-1 position. Moderate activity toward phosphatidylcholine (PC), monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and triacylglycerol (TAG). May display dual sn-1/sn-2 substrate specificity. Could be involved in early wound response.
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Major isoform.
messages: No visible phenotype under standard growth phenotype. Decreased dinor-12-oxo-phytodienoic acid (dnOPDA) formation.
messages: Not induced by wounding (PubMed:18267087). Induced by wounding (PubMed:24430866).
messages: Ubiquitous. Highly expressed in leaves.
messages: chloroplast

3702:AT4G33030
gene id: 3702:AT4G33030
uniprot id: O48917
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Concentrations above 100 uM sulfite inhibit the reaction.
messages: Homodimer.
messages: Induced in response to altered availability of inorganic phosphate.
messages: Involved in the biosynthesis of sulfolipids found in thylakoid membranes. Converts UDP-glucose and sulfite to the sulfolipid head group precursor UDP-sulfoquinovose.
messages: chloroplast

3702:AT3G11900
gene id: 3702:AT3G11900
uniprot id: Q9SF09
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.8) subfamily.
messages: Endoplasmic reticulum membrane
messages: Sequencing errors.
messages: Translocates aromatic and neutral amino acids such as tyrosine, tryptophan, phenylalanine, histidine, proline, leucine, valine, glutamine, as well as arginine. Transports the auxins indole-3-acetic acid (IAA) and 2,4-dichlorophenoxyacetic acid (2,4-D).
messages: Ubiquitous (PubMed:27925655). Highly expressed in flowers and cauline leaves and at lower levels in stems, leaves and roots (PubMed:11299361).

3702:AT3G48520
gene id: 3702:AT3G48520
uniprot id: Q9SMP5
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Hydroxylase involved in the oxidation of the plant hormone jasmonoyl-L-isoleucine (JA-Ile), a bioactive phytohormone of the jasmonate-mediated signaling pathway. Converts JA-Ile to 12-hydroxy-JA-Ile (PubMed:21576464, PubMed:21849397, PubMed:22215670). Exerts negative feedback control on JA-Ile levels and plays a key role in attenuation of jasmonate responses. Negatively regulates the expression of wound-induced genes TIFY11A/JAZ5, TIFY5A/JAZ8 and TIFY5A/JAZ10 (PubMed:21576464). Catalyzes the hydroxylation of jasmonoyl-L-valine (JA-Val), jasmonoyl-L-leucine (JA-Leu) and jasmonoyl-L-phenylalanine (JA-Phe) in vitro. Converts JA-Val, JA-Leu and JA-Phe to 12-hydroxy-JA-Val, 12-hydroxy-JA-Leu and 12-hydroxy-JA-Phe, respectively (PubMed:24467969).
messages: Induced by wounding.
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants accumulate high amounts of JA-Ile and have strongly reduced levels of 12-hydroxy-JA-Ile in response to wounding.
messages: Plants over-expressing CAP94B3 are deficient in jasmonate perception.

3702:AT5G42320
gene id: 3702:AT5G42320
uniprot id: A0A1R7T3D6
uniprot id: A0A7G2FG35
uniprot id: F4K1I4
names: Similarity
messages: Belongs to the peptidase M14 family.

3702:AT2G18070
gene id: 3702:AT2G18070
uniprot id: F4IPL2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TMEM214 family.
messages: Constitutively interacts with CASP4; required for the localization of procaspase 4 to the ER.
messages: Critical mediator, in cooperation with CASP4, of endoplasmic reticulum-stress induced apoptosis. Required or the activation of CASP4 following endoplasmic reticulum stress.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G06860
gene id: 3702:AT5G06860
uniprot id: A0A178UBN4
uniprot id: Q9M5J9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polygalacturonase-inhibiting protein family.
messages: Inhibitor of fungal polygalacturonase. It is an important factor for plant resistance to phytopathogenic fungi.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G16400
gene id: 3702:AT5G16400
uniprot id: Q9XFH9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. Plant F-type subfamily.
messages: Glutathionylation at Cys-136 decreases its ability to be reduced by ferredoxin-thioredoxin reductase and reduces its efficiency in activating target chloroplastic enzymes.
messages: Probable thiol-disulfide oxidoreductase involved in the redox regulation of enzymes of both reductive pentose phosphate pathway (Calvin-Benson cycle) and oxidative pentose phosphate pathway.
messages: chloroplast stroma

3702:AT4G36970
gene id: 3702:AT4G36970
uniprot id: A0A654FW99
uniprot id: O23188
names: Similarity
messages: Belongs to the remorin family.

3702:AT5G43440
gene id: 3702:AT5G43440
uniprot id: Q9LSW7
names: Cofactor
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.

3702:AT4G39350
gene id: 3702:AT4G39350
uniprot id: A0A384LAI4
uniprot id: O48947
uniprot id: W8QPD2
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the primary cell wall formation.
messages: Cell membrane
messages: Expressed throughout the embryo during all steps of embryogenesis, and decrease toward the bent-cotyledon stage.
messages: Homodimer. Interaction through zinc finger domain.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Plants display reduced cellulose synthesis affecting microtubule orientation, general cell size, hypocotyl growth and seeds production. Partially redundant with CESA6.
messages: Strongly and ubiquitously expressed. Localized in some dividing and expanding cells, as well as in vascular tissues.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G65730
gene id: 3702:AT5G65730
uniprot id: Q0WUU2
uniprot id: Q8LF99
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT2G03955
gene id: 3702:AT2G03955
uniprot id: Q2V4A5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G65010
gene id: 3702:AT5G65010
uniprot id: Q9LV77
names: Disruption Phenotype
names: Function
names: Induction
names: Tissue Specificity
messages: By light and sucrose. Down-regulated by dark.
messages: Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem.
messages: Expressed in the vascular region adjacent to leaf mesophyll cells in the companion cell-sieve tube element complex.
messages: Pale green leaf phenotype and reduction of biomass in mature plants. Increased levels of asparagine, proline and ammonium in response to salt treatment.

3702:AT1G61380
gene id: 3702:AT1G61380
uniprot id: A0A178WKT1
uniprot id: A0A1P8AQN4
uniprot id: O64782
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Targeted by the bacterial type III effector protein tyrosine phosphatase HopAO1 from Pseudomonas syringae (PubMed:31922267). HopAO1 dephosphorylates Tyr-600, which suppresses the immune response (PubMed:31922267).
messages: Autophosphorylated at Tyr-600 (PubMed:31922267). Autophosphorylation at Tyr-600 is required for downstream phosphorylation of the receptor-like cytoplasmic kinase PBL34, PBL35 and PBL36, and activation of plant immunity (PubMed:31922267).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with PUB9, PUB13, PUB14, PUB29, PUB38, PUB44 and PUB45 (PubMed:18552232). Interacts with PBL34, PBL35 and PBL36 (PubMed:31922267).
messages: Membrane
messages: No visible phenotype under normal growth conditions, but mutant plants are hyper-susceptible to infection by the bacterial pathogen Pseudomonas syringae.
messages: Repressed by miR393a (microRNA) in response to bacterial lipopolysaccharides (LPS) treatment.
messages: S-domain receptor protein kinase involved in lipopolysaccharide (LPS) sensing (PubMed:25729922, PubMed:29431629, PubMed:31922267). Specifically detects LPS of Pseudomonas and Xanthomonas species (PubMed:25729922). LPS are major components of the outer membrane of Gram-negative bacteria and are important microbe-associated molecular patterns (MAMPs) that trigger biphasic production of reactive oxygen species (ROS) and immune responses in plants (PubMed:25729922, PubMed:29431629). Seems to be only partially associated with the second LPS-triggered ROS burst (PubMed:29431629). Mediates defense signaling in response to the medium-chain 3-hydroxy fatty acid 3-OH-C10:0, a pathogen-associated molecular pattern (PAMP) which induces autophosphorylation at Tyr-600 (PubMed:31922267). Autophosphorylation at Tyr-600 is required for downstream phosphorylation of the receptor-like cytoplasmic kinase PBL34, PBL35 and PBL36, and activation of plant immunity (PubMed:31922267).

3702:AT5G67200
gene id: 3702:AT5G67200
uniprot id: Q93Y06
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT1G51400
gene id: 3702:AT1G51400
uniprot id: A0A178WMH6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G36170
gene id: 3702:AT2G36170
uniprot id: A0A178W3S3
uniprot id: B9DHA6
uniprot id: Q42202
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Component of the 60S subunit of the ribosome.
messages: Cytoplasm
messages: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eL40 family.
messages: In the N-terminal section; belongs to the ubiquitin family.
messages: Nucleus
messages: Ribosomal protein L40-1 is part of the 60S ribosomal subunit.
messages: Ribosomal protein L40-2 is part of the 60S ribosomal subunit.
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:ArthCp058
gene id: 3702:ArthCp058
uniprot id: A0A1B1W4X7
uniprot id: P56801
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit.
messages: chloroplast

3702:AT1G76400
gene id: 3702:AT1G76400
uniprot id: A0A178WGG6
uniprot id: A0A1P8AUN1
uniprot id: Q9SFX3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the OST1 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT2G42000
gene id: 3702:AT2G42000
uniprot id: P93746
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the metallothionein superfamily. Type 15 family.
messages: By abscisic acid (ABA) and jasmonic acid. Down-regulated by gibberellin.
messages: Cell membrane
messages: Cytoplasm
messages: During embryo development, expressed from torpedo stage (6 days after pollination) to mature embryo.
messages: Expressed specifically in seeds.
messages: Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Functions as metal chelator of copper (Cu) and zinc (Zn) (PubMed:18287486). Plays a role in storing and distributing Zn ion in seed (PubMed:22014117).
messages: Nucleus
messages: Plants silencing both MT4A and MT4B have reduced seed weight and reduced seedling growth after germination.

3702:AT4G34040
gene id: 3702:AT4G34040
uniprot id: O49500
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RING-type zinc finger family.
messages: E3 ubiquitin-protein ligase that functions as regulator of MED25 stability by targeting MED25 for degradation in a RING-H2-dependent way. Proteasome-dependent degradation of MED25 seems to activate its function as positive regulator of FLOWERING LOCUS T (FT) and is important to induce the expression of FT and consequently to promote flowering. May function downstream of HAL3 and be required for HAL3-regulated plant growth. Activation of MBR2 by HAL3 may lead to the degradation of cell cycle suppressors, resulting in enhancement of cell division and plant growth.
messages: Interacts with MED25 and UBC11.
messages: No visible phenotype under normal growth conditions, but the double mutant plants mbr1-1 and mbr2-1 show delayed flowering.
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G24330
gene id: 3702:AT5G24330
uniprot id: Q9FNE9
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
messages: Expressed in leaves, roots, stems, flowers and siliques. Up-regulated in tissues where cell division is active.
messages: Histone methyltransferase that specifically monomethylates 'Lys-27' of histone H3 (H3K27me1). Has higher activity on nucleosomes containing H3.1 than H3.3. Involved in the formation of constitutive heterochromatin and the silencing of heterochromatic elements. May act as a positive regulator of the G1-S transition. Influences which sets of rRNA gene variants are expressed or silenced. Up-regulated by E2FB.
messages: Interacts with PCNA1 and PCNA2. Interacts (via PHD domain) with HTR1 (via N-terminus). Interacts with IPS1.
messages: No visible phenotype. Atxr5 and atxr6 double mutant is smaller than wild-type plants, shows partial decondensation of the chromocenter, decreased H3K27 monomethylation and increased DNA re-replication.
messages: Nucleus
messages: The binding to histone H3.2 is unaffected by mono-, di, or trimethylation at H3K9, but is strongly reduced by increasing levels of H3K4 methylation.

3702:AT1G10880
gene id: 3702:AT1G10880
uniprot id: A0A5S9TRG3
uniprot id: Q0WR07
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G11450
gene id: 3702:AT5G11450
uniprot id: P82715
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the psbP family.
messages: Involved in strigolactone biosynthesis.
messages: Smaller plants and frequent morphological defects, including increased lateral root branching, aerial rosettes and multiple rosettes. No effect on photosystem II and linear photosynthetic electron transfer.
messages: chloroplast thylakoid lumen

3702:AT5G41040
gene id: 3702:AT5G41040
uniprot id: Q94CD1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the plant acyltransferase family.
messages: Detected in seed coats in the inner layer of the outer integument at the beginning of the desiccation stage. Also expressed at the chalazal region as desiccation proceeds.
messages: Elimination of suberin-associated ester-linked ferulate. Altered permeability and sensitivity of seeds and roots to salt stress.
messages: Expressed in roots, seedlings, leaves, stems, flowers and siliques. Detected at the protein level in roots and in seed coats.
messages: Involved in the synthesis of aromatics of the suberin polymer. Specifically affects the accumulation of the ferulate constituent of suberin in roots and seeds, but has no effect on the content of p-coumarate or sinapate.

3702:AT2G42520
gene id: 3702:AT2G42520
uniprot id: Q84W89
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX3/DED1 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT4G19530
gene id: 3702:AT4G19530
uniprot id: O49471
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance TIR-NB-LRR family.
messages: Probable disease resistance protein.
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT3G19184
gene id: 3702:AT3G19184
uniprot id: A0A178VHQ0
uniprot id: Q1G3M3
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26950
gene id: 3702:AT3G26950
uniprot id: A0A384L098
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G44750
gene id: 3702:AT3G44750
uniprot id: A0A5S9XIC3
uniprot id: F4J378
uniprot id: Q9FVE6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone deacetylase HD2 family.
messages: Expressed in leaves, roots, stems, young plantlets, flowers and siliques. Highest levels in ovules, embryos, shoot apical meristems and first leaves. Also expressed in somatic embryos.
messages: Interacts with DNMT2 (PubMed:20331964). Interacts with DEK3 (PubMed:25387881).
messages: Loss-of-function mutant (antisense inhibition) induces increased methylation of histone H3 'Lys-4' and hypomethylation of DNA at rDNA repeats.
messages: Probably mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Required for histone H3 'Lys-9' deacetylation. Involved in rRNA gene silencing in nucleolar dominance. Seems to be implicated in the regulation of genes involved in seeds development.
messages: nucleolus

3702:AT1G30480
gene id: 3702:AT1G30480
uniprot id: A0A178W6S6
uniprot id: P42698
names: Function
names: Subcellular Location Annotation
messages: Seems to be involved in the resistance to UV light and chemical DNA-damaging agents (PubMed:8479917). Regulates the splicing of the receptor-like kinase SNC4/LRKL-2.6 (PubMed:25267732).
messages: chloroplast

3702:AT5G04710
gene id: 3702:AT5G04710
uniprot id: A0A654FYH2
uniprot id: Q9LZ26
names: Similarity
messages: Belongs to the peptidase M18 family.

3702:AT1G06640
gene id: 3702:AT1G06640
uniprot id: A0A654E9C6
uniprot id: F4IDQ0
uniprot id: Q9C5K7
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT3G24770
gene id: 3702:AT3G24770
uniprot id: Q84W98
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: CLE41p interacts specifically with the leucine-rich repeat receptor-like protein kinase TDR.
messages: Extracellular signal peptide that regulates cell fate. May act with TDR as a ligand-receptor pair in a signal transduction pathway that represses tracheary element differentiation but promotes the formation of procambial cells adjacent to phloem cells in the veins in an auxin-dependent manner. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed in inflorescence and roots, and, to a lower extent, in seedlings, flowers, leaves and siliques. Observed along the vascular strands in cotyledons, leaves and roots, but not in shoot apical meristems (SAM). Restricted to the phloem and the neighboring pericycle cells in the roots and hypocotyls.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-94 enhances binding affinity of the CLE41p peptide for its receptor.
messages: extracellular space

3702:AT5G21222
gene id: 3702:AT5G21222
uniprot id: Q8S9D1
names: Domain
names: Similarity
messages: In the C-terminal section; belongs to the PPR family. P subfamily.
messages: In the N-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT5G09350
gene id: 3702:AT5G09350
uniprot id: Q0WPX9
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts on phosphatidylinositol (PtdIns) in the first committed step in the production of the second messenger inositol-1,4,5-trisphosphate (By similarity). Necessary for proper organization of the trans-Golgi network (TGN) and post-Golgi secretion in root hairs. Together with PI4KB1, required during polarized root hair expansion and pollen tube elongation. Functions redundantly with PI4KB1 upstream of the cold response phosphoinositide-dependent phospholipase C (PI-PLC) pathway.
messages: Belongs to the PI3/PI4-kinase family. Type III PI4K subfamily.
messages: Cell membrane
messages: Cytoplasmic vesicle membrane
messages: The PPC (Plant PI4K Charged) region is involved in membrane targeting and phospholipid binding.
messages: When associated with PI4KB1 disruption: aberrant root hair morphologies, and short and wavy pollen tubes.
messages: trans-Golgi network

3702:AT2G26590
gene id: 3702:AT2G26590
uniprot id: A0A178VY31
uniprot id: A0A1P8B2X5
uniprot id: O48726
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RPN13 family.
messages: Cytoplasm
messages: Functions as a proteasomal ubiquitin receptor. Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-63'-linked ubiquitin chains.
messages: Interacts with 'Lys-63'-linked polyubiquitin chains. Interacts with DSK2a.
messages: No visible phenotype.
messages: Nucleus
messages: The PH domain mediates interactions with ubiquitin and DSK2A.

3702:AT1G24150
gene id: 3702:AT1G24150
uniprot id: A0A1P8AS15
uniprot id: O48682
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the formin-like family. Class-I subfamily.
messages: Cell membrane
messages: Expressed in the whole plant (at protein level).
messages: Interacts with profilin.
messages: Might be involved in the organization and polarity of the actin cytoskeleton.

3702:AT1G10760
gene id: 3702:AT1G10760
uniprot id: A0A654E8L0
uniprot id: Q9SAC6
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PEP-utilizing enzyme family.
messages: Homodimer.
messages: Mediates the incorporation of phosphate into starch-like alpha-glucan, mostly at the C-6 position of glucose units. Acts as an overall regulator of starch mobilization. Required for starch degradation, suggesting that the phosphate content of starch regulates its degradability.
messages: The N-terminal domain contains the alpha-glucan binding site, the central domain the pyrophosphate/phosphate carrier histidine, and the C-terminal domain the ATP binding site.
messages: The level of protein does not vary in a circadian rhythm and is stable throughout day and night (at protein level).
messages: The reaction takes place in three steps, mediated by a phosphocarrier histidine residue located on the surface of the central domain. The two first partial reactions are catalyzed at an active site located on the C-terminal domain, and the third partial reaction is catalyzed at an active site located on the N-terminal domain. For catalytic turnover, the central domain swivels from the concave surface of the C-terminal domain to that of the N-terminal domain (By similarity).
messages: chloroplast

3702:AT5G10630
gene id: 3702:AT5G10630
uniprot id: A0A1P8BFE6
uniprot id: A0A1P8BFF4
uniprot id: B9DFA5
uniprot id: F4KI84
names: Function
names: Similarity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

3702:AT5G16640
gene id: 3702:AT5G16640
uniprot id: Q9FMD3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G61040
gene id: 3702:AT3G61040
uniprot id: Q9LEX2
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT1G01520
gene id: 3702:AT1G01520
uniprot id: A0A384LJW3
uniprot id: Q6R0H0
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G70660
gene id: 3702:AT1G70660
uniprot id: Q9CAB6
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Expressed in roots, shoots, leaves, stems and flowers, but not in pollen.
messages: Has no ubiquitin ligase activity on its own. The heterodimer with UBC catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. May play a role in the control of progress through the cell cycle and differentiation. May play a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage.
messages: Heterodimer with UBC35 or UBC36.
messages: Not detected in seedlings 6 hours or 2 days post-germination.
messages: Not induced by stresses.

3702:AT3G54990
gene id: 3702:AT3G54990
uniprot id: C0SVE8
uniprot id: Q6PV68
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: 'Schlafmuetze' means 'nightcap' in German.
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Repressor of flowering.
messages: Repressed by miR172 after photoperiod changement.

3702:AT2G29220
gene id: 3702:AT2G29220
uniprot id: Q9ZW09
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT3G49900
gene id: 3702:AT3G49900
uniprot id: A0A5S9XJE4
uniprot id: F4IZ87
uniprot id: Q9M2W8
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT3G07050
gene id: 3702:AT3G07050
uniprot id: A0A178VBD5
uniprot id: Q9M8Z5
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in developing embryos and in the primordia of cotyledons and leaves (PubMed:22058024). Accumulates mostly in the inflorescence meristem and in floral primordia. Low levels in the inflorescence meristem dome, but high levels in the floral primordia already in early stages. Accumulates progressively in floral organ primordia to become concentrated in the primordia of stamens and carpels. At the later stages of floral development, expressed primarily in developing microspores in the stamens and ovules in the carpels (PubMed:22357616).
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family.
messages: Dwarf with severe defects in reproduction, eventual arrest in embryo development that can occur at any stage of embryogenesis, distorted cotyledons, and upward curled leaves probably due to disoriented leaf polarity. Ectopic meristem-like outgrowths on the surface of cotyledons and leaves (PubMed:22058024). Abnormal expression of meristem-related genes and of leaf polarity-related genes (PubMed:22357616, PubMed:22058024). Heterozygote plants develop defective flowers and siliques on inflorescences sometimes terminated by the formation of carpelloid flower, and thus leading to a highly reduced self-fertility (PubMed:22357616).
messages: In contrast to other GTP-binding proteins, this family is characterized by a circular permutation of the GTPase motifs described by a G4-G1-G3 pattern.
messages: Interacts with EBP2 and PES.
messages: Involved in the differentiation of epidermal cells, probably via the regulation of the expression of meristem-related genes (e.g. CLV3, STM, KNAT1, CUC2 and AG) and of leaf polarity-related genes (e.g. YAB5, FIL, AS2, PHB and PHV) (PubMed:22058024, PubMed:22357616). May play a role in regulating cellular proliferation (By similarity). Necessary for flower development, probably by preventing apical dominance through the down-regulation of AG expression (PubMed:22357616). Required for embryogenesis, leaf and cotyledon development, as well as for leaf polarity establishment (PubMed:22058024). Plays an important role in plant growth and senescence by modulating ribosome biogenesis in nucleolus. Possesses GTPAse activity in vitro. Possesses RNA binding activity in vitro. Associates with ribosomes (PubMed:26163696).
messages: Mostly expressed in flowers, siliques and inflorescence apex, and, to a lower extent, in stems and leaves.
messages: Nucleus
messages: The DARXP motif is also sometime designated as G6 region.
messages: The basic domain (B) allows nucleolar localization in the absence of GTP. The intermediate domain (I) inhibits nucleolar localization by the B domain and is required for exit from the nucleolus. Exit from the nucleolus to the nucleoplasm requires both the I and the acidic (A) domains, and may be triggered by GTP hydrolysis.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus

3702:AT4G02710
gene id: 3702:AT4G02710
uniprot id: Q9ZQX8
names: Function
names: Similarity
messages: Belongs to the NET family.
messages: Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex.

3702:AT1G45191
gene id: 3702:AT1G45191
uniprot id: A0A1P8AW88
uniprot id: A0A1P8AWA5
uniprot id: A0A1P8AWB3
uniprot id: Q3ECW8
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT1G67970
gene id: 3702:AT1G67970
uniprot id: A0A178WF00
uniprot id: Q9S7U5
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class A subfamily.
messages: Cytoplasm
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motifs are transcriptional activator elements.
messages: Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT2G43920
gene id: 3702:AT2G43920
uniprot id: A0A178VP08
uniprot id: O80562
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.
messages: No visible phenotype under normal growth conditions.
messages: S-adenosyl-L-methionine-dependent methyltransferase. Involved in glucosinolate metabolism and defense against phytopathogens (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G34990
gene id: 3702:AT4G34990
uniprot id: O49608
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By light, UV, cold, drought, ethylene, jasmonic acid (JA), salicylic acid (SA), abscisic acid (ABA), cadmium (CdCl(2)), high salt (NaCl), and cytokinins.
messages: Mostly expressed in roots, and, to a lower extent, in stems, flower buds, and siliques.
messages: Nucleus

3702:AT2G33310
gene id: 3702:AT2G33310
uniprot id: A0A178VXT0
uniprot id: Q0WU05
uniprot id: Q38831
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers (By similarity). Interacts with TPL.
messages: Homodimers and heterodimers.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: Preferentially expressed in stems.
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT4G34430
gene id: 3702:AT4G34430
uniprot id: Q8VY05
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of a multiprotein complex equivalent of the SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors.
messages: Interacts with SWI3B, but not with BSH. Component of a RNA-directed DNA methylation (RdDM) complex that contains at least MORC6, MORC1/CRT1, MORC2, SWI3D and SUVH9 (PubMed:24465213). Interacts with MORC6 and SUVH9 (PubMed:27171427).
messages: Nucleus
messages: Plants are viable but have alterations in leaf, root and flower development, and are early flowering.
messages: Ubiquitously expressed.
messages: Was originally incorrectly assigned as CHB4.

3702:AT1G02190
gene id: 3702:AT1G02190
uniprot id: A0A178W820
uniprot id: A0A5S9S5Z5
uniprot id: F4HVX7
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Expressed in flowers and siliques. Not detected in pollen, pedicels and seeds.
messages: Membrane

3702:AT1G06920
gene id: 3702:AT1G06920
uniprot id: A0A5S9SZS4
uniprot id: F4HNU8
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in root vascular cylinder, root tips, xylem of stems, flower buds and siliques.
messages: Interacts with BLH1, BLH2, BLH3, BLH6, BLH10, KNAT1, KNAT3, KNAT4, KNAT5, KNAT6 and KNAT7.
messages: Moderate irregular xylem, but normal plant morphology.
messages: Nucleus
messages: Plants over-expressing OFP4 show kidney-shaped cotyledons, round and curled leaves, small rosette size, late flowering, reduced fertilization and round seeds.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors. Forms a transcription repression complex with KNAT7 which regulates secondary cell wall formation.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT5G40950
gene id: 3702:AT5G40950
uniprot id: Q9FLN4
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL27 family.
messages: Embryonic lethality. Embryo development arrested at the globular stage.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT5G28770
gene id: 3702:AT5G28770
uniprot id: A0A7G2FAW5
uniprot id: B9DGI8
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Expressed in roots, shoots, young leaves, pollen, and flowers.
messages: Homodimer. Forms a heterodimer with LSD1, BZIP1, BZIP2, BZIP9, BZIP10, BZIP11, BZIP25, BZIP44 and BZIP53. Interacts with KIN10 and SNF4 (PubMed:26263501). Component of a ternary complex composed of BZIP2-BZIP63 heterodimer and KIN10 (PubMed:29348240).
messages: Nucleus
messages: Phosphorylated. The phosphorylation at Ser-29, Ser-294 and Ser-300 by KIN10 strongly enhances its ability to form homo- as well as heterodimers and are then essential for its transcriptional activity (PubMed:26263501).
messages: Present in silique valves, vasculature and funiculi.
messages: Starvation-related phenotype with reduced growth and accumulation of anthocyanins.
messages: Strongly repressed by glucose.
messages: Transcription factor involved in controlling responses to starvation (PubMed:26263501). BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240).
messages: Up-regulated by KIN10 under a phosphorylation-dependent manner.

3702:AT1G08670
gene id: 3702:AT1G08670
uniprot id: A0A178WGB3
uniprot id: A0A1P8ART5
uniprot id: Q9FRR8
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: Vesicle
messages: clathrin-coated vesicle

3702:AT3G16780
gene id: 3702:AT3G16780
uniprot id: A0A654F975
uniprot id: Q9LUQ6
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL19 family.

3702:AT3G17840
gene id: 3702:AT3G17840
uniprot id: Q9LVI6
names: Caution
names: Disruption Phenotype
names: Domain
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylation is proposed although the protein kinase domain is predicted to be catalytically inactive.
messages: Autophosphorylation.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By wounding. Rapid but transient down-regulation by salicylic acid treatment or pathogen infection.
messages: Cell membrane
messages: Expressed in root tips, lateral root primordia, stipules, and floral organ abscission zones.
messages: Interacts with At3g17950, At3g27210 and At5g05190.
messages: No visible phenotype.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT2G04430
gene id: 3702:AT2G04430
uniprot id: A0A1P8B0R5
uniprot id: A0A5S9WX42
uniprot id: Q9SJC6
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, stems and leaves.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives, possibly using both NADH and ADP-ribose as substrates.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.

3702:AT4G18770
gene id: 3702:AT4G18770
uniprot id: Q9S7L2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed at high levels in the synergid cells of the female gametophyte, and at lower levels in the endosperm of young seeds and the trichomes of young leaves and sepals.
messages: Expressed in cellularized but not uncellularized female gametophytes.
messages: Impaired in pollen tube attraction associated with a reduced cytoplasmic calcium burst during pollen tube tips growing (PubMed:17937500, PubMed:23093426). Altered expression of several ovule-specific genes (PubMed:17937500).
messages: Nucleus
messages: Transcription factor that binds to the motif 5'-GTAACNT-3' in the promoter of target genes (e.g. DD11 and DD18) and promotes their expression within synergid cells (e.g. in the filiform apparatus) in ovules (PubMed:16214903, PubMed:17693534, PubMed:18410484, PubMed:17937500). Required for the formation of the filiform apparatus during synergid cell differentiation in the female gametophyte (PubMed:16214903). Involved in pollen tube guidance to the micropyle (PubMed:16214903, PubMed:17937500, PubMed:23093426).

3702:AT5G44610
gene id: 3702:AT5G44610
uniprot id: Q9LU05
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Altered cortical microtubule arrays. Abnormal cotyledon pavement cells with fewer extension lobes and shorter cell length.
messages: Belongs to the DREPP family.
messages: Binds microtubules (PubMed:17337629). Interacts with calcium ion Ca(2+), calmodulin and some phosphatidylinositol phosphates (PtdInsPs) such as phosphatidylinositol 3,5-bisphosphate [PtdIns(3,5)P(2)], PtdIns(4,5)P(2) and PtdIns(3,4,5)P(3) (PubMed:20061304).
messages: By arsenate As (V) (PubMed:18684332). Accumulates in response to abscisic acid (ABA), gibberellic acid (GA), cold, and drought stresses. Induced by various salt treatments such as NaCl, KCl, MgCl(2), MnCl(2) and ZnCl(2) (PubMed:20061304). Expressed during leaf senescence (PubMed:20966154).
messages: Cell membrane
messages: Expressed in developing root hairs and elongating pollen tubes.
messages: May be involved in intracellular signaling through interaction with PtdInsPs and calmodulin (CaM); may keep PtdInsPs attached to the plasma membrane until Ca(2+)-CaM reaches a competitive concentration subsequent to an increase triggered by a stimulus, thus leading to PtdInsPs release and subsequent activation of InsPs-dependent signaling cascade (Probable). Binds to microtubules and inhibits tubulin polymerization. Regulates directional cell growth and cortical microtubule organization by destabilizing microtubules (e.g. in cotyledon pavement cells) (PubMed:17337629).
messages: Mostly expressed in the expanding cells, specifically in roots (except in root tips) and flowers (at protein level). Also detected in cotyledons, hypocotyls and trichome stalks.
messages: cytoskeleton

3702:AT1G55150
gene id: 3702:AT1G55150
uniprot id: A0A178W6R5
uniprot id: A0A1P8ATW1
uniprot id: Q9C718
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.
messages: Belongs to the DEAD box helicase family.
messages: Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.
messages: Nucleus
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT5G02080
gene id: 3702:AT5G02080
uniprot id: A0A1P8BFF7
uniprot id: A0A1P8BFF9
uniprot id: A0A1P8BFH2
uniprot id: A0A1P8BFH8
uniprot id: A0A1P8BFI5
uniprot id: A0A1P8BFL0
uniprot id: Q9LZM3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the PPC synthetase family.
messages: Catalyzes the first step in the biosynthesis of coenzyme A from vitamin B5, where cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine.
messages: Homodimer.

3702:AT4G33610
gene id: 3702:AT4G33610
uniprot id: A0A178UV70
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G38720
gene id: 3702:AT5G38720
uniprot id: A0A1P8BGF0
uniprot id: A0A1P8BGG1
uniprot id: A0A654G670
uniprot id: Q8GYF9
names: Similarity
messages: Belongs to the RRP7 family.

3702:AT1G66720
gene id: 3702:AT1G66720
uniprot id: Q9C9M4
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the methyltransferase superfamily. SABATH family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.

3702:AT5G50860
gene id: 3702:AT5G50860
uniprot id: A0A1P8BGH2
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT1G76100
gene id: 3702:AT1G76100
uniprot id: A0A1P8APR2
uniprot id: P11490
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plastocyanin family.
messages: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.
messages: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Seems to be a minor plastocyanin in Arabidopsis.
messages: chloroplast thylakoid membrane

3702:AT5G27930
gene id: 3702:AT5G27930
uniprot id: Q0WRB2
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT5G48060
gene id: 3702:AT5G48060
uniprot id: Q9FI32
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCTP family.
messages: Membrane

3702:AT4G29600
gene id: 3702:AT4G29600
uniprot id: Q9SU87
names: Cofactor
names: Function
names: Sequence Caution
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: Sequencing errors.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

3702:AT3G15640
gene id: 3702:AT3G15640
uniprot id: Q9LW15
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 5B (TC 3.D.4.11) family.
messages: Mitochondrion inner membrane
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.

3702:AT1G76490
gene id: 3702:AT1G76490
uniprot id: A0A654ER34
uniprot id: P14891
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HMG-CoA reductase family.
messages: Catalyzes the synthesis of mevalonate, the specific precursor of all isoprenoid compounds present in plants.
messages: Down-regulated by light in immature leaves, but not in roots. Not regulated by myriocin, squalestatin or terbinafine.
messages: Dwarfing, early senescence, and sterility. 65% lower levels in triterpenoids content and 50% lower levels in sterol content. Hmg1 and hmg2 double mutants are lethal during male gametophyte development.
messages: Endoplasmic reticulum membrane
messages: Found in all tissues. Isoform Short is expressed at low levels specifically in flowers. Expressed in both the tapetum and microspores.
messages: Inactivated by phosphorylation at Ser-577 by KIN10 activated form (PubMed:28263378). Probably also phosphorylated at additional sites (PubMed:7588795, PubMed:10318703).
messages: Interacts (via N-terminus) with B''ALPHA and B''BETA.
messages: Membrane
messages: Regulated at the post-translational level in response to alterations of sphingolipid and sterol biosynthetic pathways. Negatively regulated by a PP2A-dependent dephosphorylation occurring at a site different than Ser-577. Completely inhibited by mevinolin (IC(50) = 12.5 nM). Reversibly inactivated by phosphorylation at Ser-577 by spinach or Brassica oleracea HMGR kinases in a cell-free system (PubMed:7588795, PubMed:10318703). Down-regulated by KIN10 through its phosphorylation at Ser-577 (PubMed:28263378).
messages: The N-terminal domain (1-178) of the short isoform is necessary and sufficient for directing the protein to the endoplasmic reticulum and to spherical structures.

3702:AT4G25360
gene id: 3702:AT4G25360
uniprot id: A0A178V5X6
uniprot id: Q8VYS5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT5G64800
gene id: 3702:AT5G64800
uniprot id: Q9LV97
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed in leaves and apex, and, to a lower extent, in seedlings, flowers, stems and siliques.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-100 enhances binding affinity of the CLE21p peptide for its receptor.
messages: extracellular space

3702:AT3G16600
gene id: 3702:AT3G16600
uniprot id: F4J2R0
names: Similarity
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.

3702:AT3G14520
gene id: 3702:AT3G14520
uniprot id: Q9LUE2
names: Cofactor
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: Predominantly expressed in flowers and siliques but also in roots and leaves.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT5G43780
gene id: 3702:AT5G43780
uniprot id: Q9S7D8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sulfate adenylyltransferase family.
messages: Expressed in roots and leaves.
messages: Homotetramer.
messages: Sulfate adenylyltransferase. Catalyzes the first step of the sulfate assimilation pathway.
messages: chloroplast stroma

3702:AT3G53290
gene id: 3702:AT3G53290
uniprot id: A0A654FHU7
uniprot id: Q9SCN3
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT4G02420
gene id: 3702:AT4G02420
uniprot id: O81291
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici and to the bacteria Pseudomonas syringae, characterized by stronger necrotic symptoms and higher bacterial proliferation.
messages: Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici and to the pathogenic bacteria Pseudomonas syringae.

3702:AT5G16180
gene id: 3702:AT5G16180
uniprot id: Q9LF10
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer. Interacts with RNA. Part of large ribonucleo-protein complexes that include group IIA introns and CRS1 (By similarity).
messages: Plants are albinos.
messages: Required for the splicing of group IIA introns in chloroplasts, by regulating the intron folding. Forms splicing particles with RNA. May also be involved in chloroplast protein translation.
messages: chloroplast stroma

3702:AT5G20730
gene id: 3702:AT5G20730
uniprot id: F4K5M5
uniprot id: P93022
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Acts as a transcriptional activator of several tropic stimulus-induced (TSI) genes, including SAUR50. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Required for differential growth responses of aerial tissues. Involved in ethylene responses. Regulates lateral root formation through direct regulation of LBD16 and/or LBD29 (PubMed:29184030). Functionally redundant with ARF19 (PubMed:29184030). Mediates embryo axis formation and vascular tissues differentiation. Functionally redundant with ARF5. Involved in cellular dedifferentiation during callus formation on callus-inducing medium (CIM) and in an ATXR2-dependent manner (PubMed:29184030).
messages: Belongs to the ARF family.
messages: Expressed in the whole plant.
messages: Homodimers and heterodimers (PubMed:10476078, PubMed:21734647). Interacts with the auxin-responsive proteins IAA1 and IAA12 (BODENLOS)(PubMed:14973283, PubMed:21734647). Interacts (via PB1 domain) with IAA17 (via PB1 domain) (PubMed:24706860, PubMed:21734647). Interacts with IAA19 (PubMed:14729917, PubMed:21734647). Interacts with ARF5 (PubMed:17259263, PubMed:21734647). Binds to JMJ30 (PubMed:29923261). Binds to ATXR2 in the nucleus (PubMed:29184030).
messages: Homodimers and heterodimers.
messages: Incomplete sequence. May be due to exon skipping.
messages: May be due to a competing donor splice site.
messages: Nucleus
messages: The PB1 domain provides both positive and negative electrostatic interfaces for directional protein interaction.
messages: The arf7-1 arf19-2 double mutant is defective in callus formation.

3702:AT5G35620
gene id: 3702:AT5G35620
uniprot id: A0A178UEE3
uniprot id: O04663
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Abundant in floral organs and in young developing tissues.
messages: According to the redox status, the Cys-97-Cys-138 disulfide bridge may have a role in regulating protein function by affecting its ability to bind capped mRNA.
messages: Belongs to the eukaryotic initiation factor 4E family.
messages: Decreased susceptibility to TuMV and TEV.
messages: EIF4F is a multi-subunit complex, the composition of which varies with external and internal environmental conditions. It is composed of at least EIF4A, EIF4E and EIF4G. EIF4E is also known to interact with other partners. In higher plants two isoforms of EIF4F have been identified, named isoform EIF4F and isoform EIF(iso)4F. Isoform EIF4F has subunits p220 and p26, whereas isoform EIF(iso)4F has subunits p82 and p28. This isoform interacts with the viral protein genome linked (VPg)-proteinase of turnip mosaic potyvirus. Interacts directly with LOX2. Interacts with BTF3 (PubMed:15716105).
messages: Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. Mediates susceptibility to Turnipmosaic potyvirus (TuMV) and Tobacco etch potyvirus (TEV).

3702:AT3G13100
gene id: 3702:AT3G13100
uniprot id: A0A1I9LLY2
uniprot id: Q9LK62
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: By salicylic acid (SA).
messages: Membrane
messages: Pump for glutathione S-conjugates.
messages: Ubiquitous.

3702:AT2G07734
gene id: 3702:AT2G07734
uniprot id: A0A5S9YJ31
uniprot id: Q31708
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07734) is not demonstrated. It is also probably not RNA edited and therefore differs in all the positions known to be edited.
messages: Belongs to the universal ribosomal protein uS4 family.
messages: Mitochondrion

3702:AT3G25560
gene id: 3702:AT3G25560
uniprot id: A0A178VEX6
uniprot id: F4JA15
uniprot id: F4JA17
uniprot id: Q8RY65
names: Activity Regulation
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in flowers and roots.
messages: Inhibited by the viral nuclear shuttle protein (NSP) that binds to the region required for oligomerization.
messages: Involved in defense response to geminivirus infection (By similarity). Phosphorylates RPL10A in vitro.
messages: Oligomer. Interacts with geminivirus nuclear shuttle protein (NSP).

3702:AT1G59980
gene id: 3702:AT1G59980
uniprot id: Q6XL73
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DnaJ family. C/III subfamily.
messages: Expressed constitutively at low levels in seedlings, roots, leaves, stems, flowers and siliques.
messages: Membrane
messages: Plays a continuous role in plant development probably in the structural organization of compartments (By similarity). Seems to be involved in early gravitropic signal transduction within the gravity-perceiving cells (statocytes).
messages: Up-regulated by mechanical and gravity stimulations.

3702:AT5G06110
gene id: 3702:AT5G06110
uniprot id: A0A178UFW7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G58690
gene id: 3702:AT5G58690
uniprot id: A0A1P8BHA9
uniprot id: Q944C2
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By environmental stresses such as dehydration, salinity and low temperature.
messages: Cell membrane
messages: Expressed in leaves, roots, flowers and siliques. High levels of expression in the guard cells and vasculature of leaves and roots.
messages: Membrane
messages: The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
messages: cytosol

3702:AT4G18260
gene id: 3702:AT4G18260
uniprot id: Q0WPS2
names: Cofactor
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: Membrane

3702:AT1G23350
gene id: 3702:AT1G23350
uniprot id: A0A178W564
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G55928
gene id: 3702:AT1G55928
uniprot id: Q1G3Y7
names: Similarity
messages: Belongs to the NSRP1 family.

3702:AT1G11450
gene id: 3702:AT1G11450
uniprot id: A0A178WNM5
uniprot id: A0A1P8AM13
uniprot id: A0A1P8AM19
uniprot id: Q500Z4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT4G14805
gene id: 3702:AT4G14805
uniprot id: F4JIG1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Probable lipid transfer protein.

3702:AT2G04860
gene id: 3702:AT2G04860
uniprot id: Q9SJ73
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT5G01110
gene id: 3702:AT5G01110
uniprot id: Q9LFC5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G51970
gene id: 3702:AT5G51970
uniprot id: A0A178UB81
uniprot id: Q9FJ95
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 1 zinc ion per subunit.
messages: Cell membrane
messages: Homotetramer.
messages: Mitochondrion membrane
messages: Mostly expressed in dry seeds and leaves, and, to a lower extent, in roots, stems, flowers and siliques (at protein level).
messages: Polyol dehydrogenase that catalyzes the NAD(+)-dependent oxidation of various sugar alcohols. Is mostly active with D-sorbitol (D-glucitol), ribitol and xylitol as substrates, leading to the C2-oxidized products D-fructose, D-ribulose and D-xylulose, respectively. To a lesser extent, can also oxidize arabitol, mannitol, lactitol and maltitol in vitro. Is required for sorbitol metabolism. Cannot use NADP(+) as the electron acceptor.
messages: Reduced dry weight and primary root length when grown in the presence of sorbitol. Increased resistance to dehydration under short-day conditions.
messages: cytosol

3702:AT1G66970
gene id: 3702:AT1G66970
uniprot id: A0A178WCT5
uniprot id: Q7Y208
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: Cell membrane
messages: Expressed in rosette and cauline leaves, stems, flowers and siliques.
messages: Hydrolyzes glycerolphosphoglycerol, glycerophosphocholine and glycerophosphoethanolamine in vitro.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G16440
gene id: 3702:AT2G16440
uniprot id: A0A178VLY4
uniprot id: Q0WVF5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.
messages: Belongs to the MCM family.
messages: Component of the MCM2-7 complex.
messages: Component of the minichromosome maintenance (MCM) complex, a heterotetramer composed of MCM2, MCM3, MCM4, MCM5, MCM6 and MCM7. Interacts with ETG1.
messages: Expressed in shoot apex and flower buds.
messages: Nucleus
messages: Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.

3702:AT2G33020
gene id: 3702:AT2G33020
uniprot id: O49329
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane

3702:AT5G64930
gene id: 3702:AT5G64930
uniprot id: Q9LV85
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts with SIM and SMR1 (PubMed:25455564).
messages: May play a role in transcriptional processes (PubMed:21875893). Regulates negatively the senescence and chlorotic lesions induced by biotic (e.g. pathogens) and abiotic (e.g. sugars, darkness) agents, probably by controlling programmed cell death (pcd) (PubMed:11846876,PubMed:9338960, Ref.6, PubMed:11728314). Negative regulator of plant programmed cell death (PCD) and effector-triggered immunity (ETI) (PubMed:25455564). Promotes cell division and endoreduplication (e.g. in trichomes) (PubMed:11728314).
messages: Membrane
messages: Nucleus membrane
messages: Plants are more resistant to pathogens such as P.syringea and P.parasitica and develops spontaneous lesions.
messages: Ubiquitous.

3702:AT5G55950
gene id: 3702:AT5G55950
uniprot id: A0A1P8BH28
uniprot id: A0A1P8BH41
uniprot id: A0A1P8BH42
uniprot id: Q9FG70
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT1G62886
gene id: 3702:AT1G62886
uniprot id: A0A178WF85
uniprot id: B3H572
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFB5 family.
messages: Component of the 7-subunit TFIIH core complex.
messages: In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape.
messages: Nucleus

3702:AT5G48945
gene id: 3702:AT5G48945
uniprot id: P82761
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G67630
gene id: 3702:AT1G67630
uniprot id: F4HTP2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
messages: Belongs to the DNA polymerase alpha subunit B family.
messages: Nucleus

3702:AT5G10510
gene id: 3702:AT5G10510
uniprot id: A0A1P8BDC1
uniprot id: A0A2H1ZE66
uniprot id: F4KGW7
uniprot id: F4KGW9
uniprot id: Q52QU2
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Detected in inflorescence and youg floral mersitems, and in stem procambial cells. In floral mersitems, mostly expressed in the central dome. Disappears progressively from sepal primordia, but accumulates in second, third and fourth whorl organ primordia. Later, confined to occasional patches in stamens and in petal before disparearing progressively from flowers.
messages: Expressed in roots, seedlings, hypocotyl, inflorescence, siliques, and pistils. Also detected at low levels in leaves.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

3702:AT5G37475
gene id: 3702:AT5G37475
uniprot id: A0A384KPK2
uniprot id: Q8GRX2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit J family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3702:AT1G77920
gene id: 3702:AT1G77920
uniprot id: A0A384L1B6
uniprot id: Q0WQ44
uniprot id: Q93ZE2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bZIP family.
messages: Binds DNA as a dimer. Interacts with NPR1 and NPR4. Interacts with GRXC7/ROXY1.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity).

3702:AT1G74940
gene id: 3702:AT1G74940
uniprot id: Q8GRN0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FLZ family.
messages: Cytoplasm
messages: Down-regulated by NaCl.
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:24600465, PubMed:29945970). Interacts with KINB1, KINB2, KINB3 and SNF4 via its N-terminal part (PubMed:29945970).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.
messages: Nucleus

3702:AT1G29460
gene id: 3702:AT1G29460
uniprot id: A0A1P8AMQ0
uniprot id: Q0WPR6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals.

3702:AT4G22620
gene id: 3702:AT4G22620
uniprot id: A0A7G2F2U6
uniprot id: O49643
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G06560
gene id: 3702:AT5G06560
uniprot id: Q9FG14
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Endomembrane system
messages: Interacts with myosin XI-I.
messages: Membrane-anchored myosin receptors that define a distinct, plant-specific transport vesicle compartment.
messages: The GTD-binding domain is sufficient for myosin binding.

3702:AT3G27400
gene id: 3702:AT3G27400
uniprot id: A0A1I9LNU6
uniprot id: Q9LTZ0
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT5G28780
gene id: 3702:AT5G28780
uniprot id: F4KA12
names: Similarity
messages: Belongs to the helicase family.

3702:AT5G06410
gene id: 3702:AT5G06410
uniprot id: Q8L7K4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HscB family.
messages: Co-chaperone required for the assembly of iron-sulfur [Fe-S] clusters in both mitochondria and cytosol (PubMed:19865480). Required for the activity of iron-sulfur proteins such as aconitase and succinate dehydrogenase (PubMed:19865480). Involved in iron homeostasis and may take part in the control of iron translocation from roots to shoots (PubMed:27655366).
messages: Floral stems lacking the epicuticular wax layer, distorted leaf trichomes, and under-developed siliques with shrunked and non-viable seeds (PubMed:19865480). Strong reduction of the activity of iron-sulfur proteins such as aconitase and succinate dehydrogenase (PubMed:19865480).
messages: Interacts with ISU1 and HSP70-9/HSCA1.
messages: Mitochondrion
messages: cytosol

3702:AT5G51790
gene id: 3702:AT5G51790
uniprot id: A0A178UFD1
uniprot id: A0A1P8BH30
uniprot id: A0A1P8BH39
uniprot id: A0A384KPP1
uniprot id: A0A5S9YDA1
uniprot id: Q9FLI0
names: Caution
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G73965
gene id: 3702:AT1G73965
uniprot id: A0A178WCL2
uniprot id: Q6NMF0
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed in seedlings, roots, flowers, stems and apex, and, to a lower extent, in leaves and siliques.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-102 enhances binding affinity of the CLE13p peptide for its receptor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: extracellular space

3702:AT5G59730
gene id: 3702:AT5G59730
uniprot id: F4KJ98
uniprot id: Q9FN91
names: Function
names: Similarity
messages: Belongs to the EXO70 family.
messages: Component of the exocyst complex.

3702:AT4G27585
gene id: 3702:AT4G27585
uniprot id: A0A178UVT3
uniprot id: Q93VP9
names: Similarity
messages: Belongs to the band 7/mec-2 family.

3702:AT2G34070
gene id: 3702:AT2G34070
uniprot id: A0A178VUI2
uniprot id: A0A1P8B0E0
uniprot id: O22960
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT5G02030
gene id: 3702:AT5G02030
uniprot id: Q9LZM8
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/BELL homeobox family.
messages: Expressed during late heart stage embryo in the SAM region between the two developing cotyledons. Expression is initially down-regulated in incipient floral primordia but a strong expression is subsequently detected in the central region of young floral primordia and the inner whorl of developing flowers. In fruit, is expressed in the replum of developing ovaries.
messages: May form heterodimeric complex with the TALE/KNOX proteins STM, KNAT1/BP and KNAT6 (PubMed:12897247, PubMed:16513846, PubMed:16741748). Interacts with KNATM, isoform KNATM-B (PubMed:18398054).
messages: Nucleus
messages: Predominantly expressed in stems, inflorescences and flowers.
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.
messages: Transcription factor that is involved in the preservation of the spiral phyllotactic arrangement leading to a regular pattern of organ initiation. Required for maintenance of stem cell fate in the shoot apical meristem, and is essential for specifying floral primordia and establishing early internode patterning events during inflorescence development. Acts as transcription repressor of AG expression in floral and inflorescence meristems. Is also responsive of the nuclear import of SHOOT MERISTEMLESS (STM). In the fruit, plays a central role in patterning by negatively regulating SHP expression in order to prevent replum cells from adopting a valve margin cell fate.

3702:AT5G03330
gene id: 3702:AT5G03330
uniprot id: Q9LZF7
names: Function
names: Similarity
messages: Belongs to the peptidase C85 family.
messages: Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (Probable). Cysteine protease with a preference for 'Lys-63' over 'Lys-48' over 'Met-1' -linked ubiquitin (UB) tetramers as substrates (PubMed:24659992). Cleaves also RUB-GST fusion (PubMed:24659992).

3702:AT4G36650
gene id: 3702:AT4G36650
uniprot id: O23215
names: Function
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Nucleus
messages: Plant-specific TFIIB-related protein that may be involved in an intracellular signaling pathway between plastids and the nucleus (PubMed:12697827). May act as general transcription factor (GTF) of RNA polymerase I-dependent transcription and rRNA synthesis. Forms a ternary complex with TBP2 and the rDNA promoter region (PubMed:18668124).
messages: Ubiquinated. Subsequent degradation by the proteasome pathway.
messages: Widely expressed.
messages: chloroplast outer membrane

3702:AT2G26270
gene id: 3702:AT2G26270
uniprot id: A0A178VZL0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G40420
gene id: 3702:AT5G40420
uniprot id: A0A178UA73
uniprot id: Q39165
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oleosin family.
messages: In siliques, expression is first detected at stage 7 when the siliques are green-brown. Expression then rises steadily to reach a maximum at maturity.
messages: Lipid droplet
messages: May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth (By similarity).
messages: Membrane

3702:AT5G47310
gene id: 3702:AT5G47310
uniprot id: A0A178UAX1
uniprot id: Q9LVS8
names: Similarity
messages: Belongs to the DeSI family.

3702:AT2G34040
gene id: 3702:AT2G34040
uniprot id: A0A654F021
uniprot id: F4IGU7
uniprot id: O22957
names: Similarity
messages: Belongs to the API5 family.

3702:AT5G63630
gene id: 3702:AT5G63630
uniprot id: Q9FFQ1
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT2G41700
gene id: 3702:AT2G41700
uniprot id: F4IKZ5
uniprot id: Q84M24
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Membrane

3702:AT2G25660
gene id: 3702:AT2G25660
uniprot id: A0A1P8AYW3
uniprot id: A0A654EXQ2
uniprot id: F4ISL7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TamB family.
messages: Embryonic lethality when homozygous (PubMed:15266054). Embryo development arrested at globular stage (PubMed:15266054).
messages: Membrane
messages: Part of the TIC complex, which can interact with components of the TOC complex to form a larger import complex (PubMed:30464337). Interacts with the TOC complex component TOC75-3 (PubMed:30464337).
messages: Part of the inner chloroplast membrane translocon complex (TIC) which associates with the outer chloroplast membrane translocon complex (TOC) and forms a supercomplex involved in protein precursor import into the chloroplast stroma (PubMed:30464337). Required for the import of HSP93, TIC40 and RBCS protein precursors in the chloroplast stroma (PubMed:30464337). Links the outer and inner membrane translocons of the chloroplast envelope (PubMed:30464337).
messages: chloroplast inner membrane
messages: chloroplast intermembrane space

3702:AT4G34590
gene id: 3702:AT4G34590
uniprot id: O65683
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A highly conserved upstream open reading frame (uORF) coding for 42 amino acids is essential for the BZIP11 sucrose-induced repression of translation (SIRT) (PubMed:15208401). Plants over-expressing BZIP11 show severe alterations of plant growth and development, reduced seed set and viability (PubMed:18088315).
messages: By light (PubMed:9620274). Induced by hypoosmolarity (PubMed:15047879). Repressed by sucrose (at protein level) (PubMed:9721683, PubMed:15208401).
messages: Forms heterodimers with BZIP1, BZIP9, BZIP10, BZIP25 and BZIP63 (PubMed:16709202). Interacts with ADA2B (PubMed:24861440).
messages: Highly expressed in stems and flowers (PubMed:9620274). Expressed in root tips, cotyledons, leaf vasculature, embryos, apical parts of siliques and funiculi (PubMed:9721683).
messages: Nucleus
messages: Transcription factor that binds to the DNA sequence 5'-ACTCAT-3' in target gene promoters. Promotes POX1/PRODH1 expression in response to hypoosmolarity stress (PubMed:15047879). Positively regulates the expression of ASN1 and POX2/PRODH2 genes, which are involved in amino acid metabolism (PubMed:18088315). Regulates several metabolic pathways such as myo-inositol, raffinose and trehalose. Regulates several trehalose metabolism genes, including TRE1, TPP5 and TPP6 (PubMed:21534971). Mediates recruitment of the histone acetylation machinery to activate auxin-induced transcription. Interacts with ADA2B adapter protein to promote ADA2B-mediated recruitment of SAGA-like histone acetyltransferase complexes to specific auxin-responsive genes (PubMed:24861440).

3702:AT1G31630
gene id: 3702:AT1G31630
uniprot id: Q9C6V3
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with AGL61/DIANA and AGL62.
messages: Nucleus
messages: Probable transcription factor.

3702:AT1G12910
gene id: 3702:AT1G12910
uniprot id: Q9LPV9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Circadian-regulation.
messages: Clock protein essential for the proper expression phase and period length of both the oscillator and output genes known to participate in photoperiod sensing. Required for the expression of APRR9, APRR7, and APRR5. Regulated by APRR9 and APRR7 at the transcriptional level, indicating the existence of a positive feedback loop within the circadian clock (PubMed:21357491). May function to delay the expression of the morning genes until dawn approaches.
messages: Exhibits circadian rhythm expression.
messages: Nucleus
messages: Plants lacking LWD1 do not show obvious phenotypic alterations. Plants lacking both LWD1 and LWD2 are early flowering and this phenotype is more prominent under short-day conditions.

3702:AT1G32500
gene id: 3702:AT1G32500
uniprot id: A0A384LFE4
uniprot id: Q9LQK7
names: Caution
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with NAP7.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Was originally (PubMed:11346655) thought to belong to the ABC transporter family. Lacks the conserved ABC domain, which is one of the features of the ABC transporter family.
messages: chloroplast

3702:AT3G02750
gene id: 3702:AT3G02750
uniprot id: Q9M8R7
names: Cofactor
names: Miscellaneous
names: Sequence Caution
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: May be due to an intron retention.
messages: Sequencing errors.

3702:AT1G02770
gene id: 3702:AT1G02770
uniprot id: Q9SRX1
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.

3702:AT5G11500
gene id: 3702:AT5G11500
uniprot id: A0A178UQS1
uniprot id: F4JXW2
uniprot id: Q9LYE1
names: Similarity
messages: Belongs to the CCDC25 family.

3702:AT5G59780
gene id: 3702:AT5G59780
uniprot id: A0A654GCP6
uniprot id: Q4JL84
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Isoform MYB59-1 is induced by jasmonate (JA), salicylic acid (SA), gibberellic acid (GA), and ethylene. Also induced by cadmium (Cd).
messages: Mainly expressed in leaves and seedlings, and to a lower extent, in roots, stems and inflorescences. Isoform MYB59-1 and isoform MYB59-2 are present in roots, leaves, and seedlings, while the expression of isoform MYB59-3 and isoform MYB59-4 is confined to seedlings.
messages: Nucleus
messages: Transcription factor.

3702:AT3G10150
gene id: 3702:AT3G10150
uniprot id: Q9SR79
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Expressed in stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.
messages: Secreted

3702:AT1G60450
gene id: 3702:AT1G60450
uniprot id: A0A654ELD3
uniprot id: Q4PSY4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Belongs to the glycosyltransferase 8 family. Galactosyltransferase subfamily.
messages: Cytoplasm
messages: Galactinol synthase involved in the biosynthesis of raffinose family oligosaccharides (RFOs) that function as osmoprotectants. May promote plant stress tolerance (By similarity).

3702:AT5G05580
gene id: 3702:AT5G05580
uniprot id: P48622
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fatty acid desaturase type 1 family.
messages: By low temperature.
messages: Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.
messages: chloroplast membrane

3702:AT3G49630
gene id: 3702:AT3G49630
uniprot id: A0A178VKC2
uniprot id: A0A1I9LMM4
uniprot id: A0A384LEJ0
uniprot id: F4IY03
names: Caution
names: Cofactor
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G47128
gene id: 3702:AT1G47128
uniprot id: A0A178WIH7
uniprot id: P43297
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase C1 family.
messages: By high salt conditions and drought stress.
messages: Cysteine protease that plays a role in immunity, senescence, and biotic and abiotic stresses (Probable). Involved in immunity against the necrotrophic fungal pathogen Botrytis cinerea (PubMed:22238602). Involved in elicitor-stimulated programmed cell death (PCD). During infection by the necrotrophic fungal pathogen Botrytis cinerea, functions as PCD-promoting protease that is released from the ER body or vacuole to the cytoplasm (PubMed:23398119). Accumulates in endoplasmic reticulum-derived bodies in epidermal cells and may participate in cell death in stressed or injured cells (PubMed:11577182). Involved in water stress-induced cell death through its protease activity that is released to the cytoplasm after vacuolar collapse (PubMed:26884487). Possesses protease activity in vitro and is involved in cell death in the transmitting tract and septum epidermis during flower development (PubMed:26160583). Possesses peptide ligase activity. Can ligate peptides to unmodified N-termini of acceptor proteins. Probably ligates through a thioester intermediate (PubMed:18660805).
messages: Golgi apparatus
messages: Inhibited by the cysteine protease inhibitor E64 (L-trans-epoxysuccinyl-leucylamide-(4-guanido)-butane).
messages: Interacts with SERPIN1 (PubMed:23398119, PubMed:20181955). Interacts with PRN2 (PubMed:24947605). Interacts with WSCP (PubMed:26160583, PubMed:26016527). Interacts with TZF4, TZF5 and TZF6 (PubMed:26978070).
messages: No visible phenotype under normal growth conditions (PubMed:22238602, PubMed:22396764). Mutant plants show increased susceptibility to infection by the necrotrophic fungal pathogen Botrytis cinerea (PubMed:22238602).
messages: P-body
messages: Stress granule
messages: Vacuole

3702:AT1G67700
gene id: 3702:AT1G67700
uniprot id: Q8LDL0
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with psbB, psbC and LQY1, but not with psbA or psbD (PubMed:24632535).
messages: Involved in photoprotection. Forms a complex with LQY1 that is involved in the repair and reassembly cycle of the PSII-LHCII supercomplex under high-light conditions. May function in guiding the release of psbC from PSII core monomers.
messages: No visible phenotype, when grown under normal light conditions. Partial loss of PSII capacity after high-light stress.
messages: Not regulated at the transcription level by high light.
messages: chloroplast thylakoid membrane

3702:AT4G11130
gene id: 3702:AT4G11130
uniprot id: O82504
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RdRP family.
messages: Interacts with NRPD1 and SHH1. Associates with Pol IV complex, forming an interpolymerase channel bridging their active sites, through which the Pol IV-generated transcript is handed over to the RDR2 active site after being backtracked, where it is used as the template for double-stranded RNA (dsRNA) synthesis (PubMed:34941388). Interacts with JMJ24 (PubMed:26119694).
messages: Late flowering and absence of siRNAs derived from FWA tandem repeat regions. Loss of de novo methylation. Increased expression of retrotransposon-derived solo long terminal repeat (solo LTR) and SDC due to their derepression; levels are even higher in the double mutant rdr2-1 jmj24-1 (PubMed:26119694).
messages: Nucleus
messages: RDR2 is non-functional in the absence of associated Pol IV.
messages: RNA-dependent direct polymerase involved in the production of small interfering RNAs (siRNAs). Binds to single-stranded RNA (ssRNA); engages ssRNAs longer than 7 nucleotides and initiates internal to their 3' ends (PubMed:34903670). Able to transcribe the RNA of an RNA/DNA hybrid, the transcript produced by Pol IV, if its 3' end is accessible, to generate double-stranded small interfering RNAs (dsRNAs) precursor essential for establishing and maintaining DNA methylation (PubMed:34903670, PubMed:34941388). Required for the biogenesis of endogenous siRNAs of 24 nucleotide which derive from heterochromatin and DNA repeats such as transposons or endogenous gene tandem repeats, such as repeats present in FWA gene. Involved in transcriptional gene silencing (TGS). Component of the RNA-directed DNA methylation (RdDM) silencing pathway that utilizes siRNAs to guide DNA methyltransferases to asymmetric cytosines. Involved in control of flowering time through RdDM of FWA locus. Required for reception of long-distance mRNA silencing in the shoot. Required for the formation of telomeric siRNAs and the RNA-dependent DNA methylation of asymmetric cytosines in telomeric (5'-CCCTAAA-3') repeats.
messages: nucleolus
messages: nucleoplasm

3702:AT3G60390
gene id: 3702:AT3G60390
uniprot id: A0A654FJH0
uniprot id: P46602
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: Nucleus
messages: Probable transcription factor.

3702:AT2G26990
gene id: 3702:AT2G26990
uniprot id: Q8W207
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CSN2 family.
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of IAA6 by regulating the activity of the Ubl ligase SCF-TIR complex.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8. In the CSN complex, it probably interacts directly with CSN1 and CSN4. Interacts directly with CUL1 and CUL3A.
messages: Cytoplasm
messages: Nucleus

3702:AT4G02780
gene id: 3702:AT4G02780
uniprot id: Q38802
names: Activity Regulation
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsc subfamily.
messages: Catalyzes the conversion of geranylgeranyl diphosphate to the gibberellin precursor ent-copalyl diphosphate.
messages: Expressed in roots, leaves, flowers and also in siliques.
messages: Inhibited by high concentrations of magnesium.
messages: The Asp-Xaa-Asp-Asp (DXDD) motif is important for the catalytic activity through binding to Mg(2+).
messages: The N-terminus is blocked.
messages: chloroplast

3702:AT2G34190
gene id: 3702:AT2G34190
uniprot id: A0A178VP67
uniprot id: Q94C70
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Expressed in cotyledons 10 days after imbibition (DAI). Expressed in the minor and major veins of cotyledons and leaves, in the shoot apex and pedicels. Expressed in the root meristems, root tips and lateral root primordia.
messages: Highly expressed in gynoecium development, disappearing with maturation.
messages: Membrane

3702:AT3G55090
gene id: 3702:AT3G55090
uniprot id: Q9M2V7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane

3702:AT1G55870
gene id: 3702:AT1G55870
uniprot id: A0A1P8AUW2
uniprot id: Q9LG26
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 3'-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs. Essential for early development, possibly by participating in silencing certain maternal mRNAs translationally. May have a pivotal role in stress response.
messages: Belongs to the CAF1 family.
messages: Cytoplasm
messages: May be due to a competing acceptor splice site.
messages: May be due to intron retention.
messages: Nucleus
messages: Widely expressed. Expressed in roots, stems, leaves and flowers.

3702:AT5G45110
gene id: 3702:AT5G45110
uniprot id: Q8L746
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Elevated PR-1 expression level and enhanced resistance to Hyaloperonospora parasitica.
messages: Interacts with TGA2, TGA3, TGA5 and TGA6. Interacts with TGA2 in vivo in the nucleus.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Involved in the regulation of basal defense responses against pathogens.
messages: Nucleus
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Up-regulated following pathogen challenge or salicylic acid (SA) treatment.

3702:AT3G49000
gene id: 3702:AT3G49000
uniprot id: A0A384KQ15
uniprot id: Q8LPK6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic RPC3/POLR3C RNA polymerase subunit family.
messages: Component of the RNA polymerase III (Pol III) complex consisting of 17 subunits.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79790
gene id: 3702:AT1G79790
uniprot id: A0A178WFR0
uniprot id: Q84VZ1
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.
messages: FMN hydrolase that catalyzes the dephosphorylation of flavin mononucleotide (FMN) to riboflavin (PubMed:22002057, PubMed:24123841, PubMed:27490826). Can also dephosphorylate 5-amino-6-(5-phospho-D-ribitylamino)uracil, also known as ARPP (PubMed:24123841, PubMed:27490826). Not required for riboflavin biosynthesis in planta, but may help maintaining flavin homeostasis within chloroplasts (PubMed:27490826).
messages: Homodimer.
messages: No visible phenotype and no effect on flavin metabolite profile and abundances.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast stroma

3702:AT3G14440
gene id: 3702:AT3G14440
uniprot id: Q9LRR7
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the carotenoid oxygenase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By salt or drought stress and pathogen.
messages: Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids, in response to water stress.
messages: Inhibited by abamine and abamineSG.
messages: Localized in roots, leaves, stems, empty silique envelopes and seeds. Expressed at the point of organ attachment and the abscission zones in the plant.
messages: Overexpression of NCED3 results in increased accumulation of abscisic acid and resistance to water stress.
messages: Plants show enhanced germination on salt and hypersensitivity to desiccation and LiCl.
messages: chloroplast stroma

3702:AT5G10150
gene id: 3702:AT5G10150
uniprot id: A0A1P8BC74
uniprot id: A0A1P8BC89
uniprot id: A0A1P8BC94
uniprot id: A0A654G017
uniprot id: Q9LX14
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Soseki' means cornerstone in Japanese.
messages: Belongs to the SOSEKI family.
messages: Cell membrane
messages: During embryogenesis, first observed at the globular stage and accumulates in forming cotyledons at the heart stage (PubMed:30737509). Expressed in the inner basal edge of endodermal cells in the primary and lateral roots (PubMed:30737509).
messages: Epigenetically down-regulated by vernalization (PubMed:15186749, PubMed:18156133). Not regulated by SUF4 (PubMed:17138694).
messages: Expressed during embryogenesis and in roots.
messages: Homodimer (PubMed:30737509). Forms long polymer filaments with other SOKs proteins polymers (e.g. SOK1, SOK2, SOK3 and SOK4) crucial for polar localization and biological activity (PubMed:32004461). Binds to ANGUSTIFOLIA (AN) (PubMed:32004461).
messages: Membrane
messages: Part of a three-gene cluster containing FLC, UFC and DFC, which is coordinately regulated in response to vernalization (PubMed:15186749, PubMed:18156133). Also regulated by FLX (PubMed:15186749). SOSEKI proteins (SOK1-5) locally interpret global polarity cues and can influence cell division orientation to coordinate cell polarization relative to body axes, probably by guiding ANGUSTIFOLIA (AN) polarized localization (PubMed:30737509, PubMed:32004461).
messages: The DIX-like oligomerization domain is required for polymerization, edge localization and biological activity.

3702:AT5G15090
gene id: 3702:AT5G15090
uniprot id: Q9SMX3
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.
messages: Cell membrane
messages: Consists mainly of membrane-spanning sided beta-sheets.
messages: Expressed in leaf tips, anthers and stigma.
messages: Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity).
messages: Induced during the hypersensitive response to X.campestris pv campestris and by the bacterial pathogen P.syringae pv. tomato.
messages: Interacts with KIN14F/KP1 (PubMed:21406623). Interacts with FBA6 and GAPC1 (PubMed:23316205).
messages: Mitochondrion outer membrane
messages: No visible phenotype under normal growth conditions.

3702:AT3G12770
gene id: 3702:AT3G12770
uniprot id: A0A178VI66
uniprot id: Q9LTV8
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT3G56230
gene id: 3702:AT3G56230
uniprot id: A0A654FGA0
uniprot id: Q9LYL9
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT2G43070
gene id: 3702:AT2G43070
uniprot id: A0A178VZ31
uniprot id: A0A1P8B2Y1
uniprot id: A0A1P8B2Y2
uniprot id: A0A1P8B2Y7
uniprot id: A0A654F1E7
uniprot id: Q4V3B8
names: Developmental Stage
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase A22B family.
messages: Endosome membrane
messages: Expressed in the shoot meristem and root epidermal cells in germinating seeds.
messages: Glycosylated.
messages: Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane.
messages: Membrane
messages: The PAL motif is required for normal active site conformation.
messages: Ubiquitous.

3702:AT3G07740
gene id: 3702:AT3G07740
uniprot id: A0A654F6B3
uniprot id: A8MRD5
uniprot id: F4JFM6
uniprot id: Q9SFD5
names: Domain
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acetylated in vitro by GCN5, but acetylation is not essential for biological activity.
messages: Expressed in roots and leaves.
messages: Interacts in vitro with the HAT domain of GCN5 and with the DNA-binding domain of the transcriptional activator DREB1B/CBF1.
messages: Nucleus
messages: Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region.
messages: The middle domain of ADA2a is sufficient for interaction with the HAT catalytic domain of GCN5.

3702:AT5G48030
gene id: 3702:AT5G48030
uniprot id: Q8GWW8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DnaJ family.
messages: Chaperone that may play a role in mitochondrial protein folding. Involved in female gametophyte development. Required for cell death of the synergid cells during fertilization process, and fusion of the polar nuclei during megagametogenesis.
messages: Defect in fusion of polar nuclei and in synergid cell death.
messages: Mitochondrion
messages: Widely expressed.

3702:AT2G01630
gene id: 3702:AT2G01630
uniprot id: A0A1P8AXY5
uniprot id: A0A654F1Y2
uniprot id: A8MRK0
uniprot id: Q9ZU91
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: Cell membrane
messages: Contains two additional disulfide bonds.

3702:AT2G47510
gene id: 3702:AT2G47510
uniprot id: A0A178VMD4
uniprot id: P93033
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
messages: Catalyzes the reversible stereospecific interconversion of fumarate to L-malate (PubMed:29688630). Catalyzes the hydration of fumarate to L-malate in the tricarboxylic acid (TCA) cycle to facilitate a transition step in the production of energy in the form of NADH (By similarity).
messages: Embryonic lethality.
messages: Fumarate hydratase activity (fumarate to L-malate) is strongly inhibited by phosphoenolpyruvate, citrate, oxaloacetate, ATP and ADP (PubMed:29688630). Malate dehydratase activity (malate to fumarate) is activated by oxaloacetate, pyruvate, Asn and Gln (PubMed:29688630). Malate dehydratase activity (malate to fumarate) is inhibited by citrate, succinate, ADP, ATP, glucose-6P and phosphoenolpyruvate (PubMed:29688630).
messages: Homotetramer.
messages: Mitochondrion
messages: There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors.

3702:AT1G70520
gene id: 3702:AT1G70520
uniprot id: Q9CAL3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT4G22340
gene id: 3702:AT4G22340
uniprot id: A0A654FRU8
uniprot id: F4JL60
uniprot id: F4JL62
uniprot id: O49639
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDS family.
messages: May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction.
messages: Membrane
messages: Requires a divalent cation for activity.

3702:AT5G59430
gene id: 3702:AT5G59430
uniprot id: Q8L7L8
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A N-terminal domain (80-269) is responsible for the interaction with KU70.
messages: Binds specifically to the plant telomeric double-stranded DNA sequences 5'-GGTTTAG-3'. At least 4 repeats of telomeric sequences are required for binding. Induces DNA bending.
messages: Expressed ubiquitously. Highest expression in flowers and leaves.
messages: Homodimer and heterodimer with TRP2 and TRP3. Interacts with KU70.
messages: No visible phenotype, probably due to redundancy.
messages: Nucleus
messages: The C-terminal domain (464-578) is sufficient for telomere binding.

3702:AT4G25020
gene id: 3702:AT4G25020
uniprot id: Q9SW24
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MOS2 family.
messages: Nucleus

3702:AT3G08880
gene id: 3702:AT3G08880
uniprot id: Q67XT3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity to ensure proper cell division. Required for the maintenance of plant architecture.
messages: Belongs to the SPC24 family.
messages: Component of the NDC80 complex, which consists of NDC80, NUF2, SPC24 and SPC25.
messages: Embryonic lethality due to division arrest before the globular stage.
messages: Highly expressed in actively dividing tissues, such as shoot apical meristem (SAM), root apical meristem (RAM), vasculature, newly emerging leaves and inflorescence shoots.
messages: centromere

3702:AT4G31350
gene id: 3702:AT4G31350
uniprot id: A0A1P8B6A9
uniprot id: A0A384LM49
uniprot id: Q8GS18
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G04870
gene id: 3702:AT3G04870
uniprot id: Q38893
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Albino seedling due to defect in pigmentation, growth arrest shortly after germination, altered leaf development, and seedling lethality.
messages: Belongs to the zeta carotene desaturase family.
messages: Highly expressed in leaves. Expressed at low levels in flowers and siliques.
messages: Lipophilic quinones such as decyl-plastoquinone or decyl-ubiquinone.
messages: Plays a crucial role in plant growth and development. Is essential for the biosynthesis of carotenoids. Carotenoids are involved in different physiological processes, including coloration, photoprotection, biosynthesis of abscisic acid (ABA) and chloroplast biogenesis (PubMed:17468780, PubMed:24907342). Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. Shows stereoselectivity toward trans C15-C15'zeta-carotene double bond. The zeta-carotene produced by the phytoene desaturase PDS has a C15-C15' double bond in the cis configuration and it requires isomerization before being recognized as substrate by ZDS. The main product is 7,9,7',9'-tetra-cis-lycopene (pro-lycopene) (PubMed:9914519).
messages: chloroplast
messages: chromoplast

3702:AT5G08480
gene id: 3702:AT5G08480
uniprot id: A0A178UC47
uniprot id: Q9FNP0
names: Function
names: PTM
names: Subcellular Location Annotation
messages: May modulate WRKY transcription factor activities.
messages: Nucleus
messages: Phosphorylated on serine and threonine residues by MPK6.

3702:AT1G52130
gene id: 3702:AT1G52130
uniprot id: Q9ZU13
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT1G08620
gene id: 3702:AT1G08620
uniprot id: A0A1P8AMS3
uniprot id: A0A654E8Z6
uniprot id: A0A7G2DRN2
uniprot id: C0SUT9
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Confined to inflorescences.
messages: Fades out gradually during aging.
messages: Functions as histone H3 'Lys-4' (H3K4me) demethylase involved in the negative regulation of gene expression (PubMed:30712008, PubMed:32572214). Active on H3K4me1, H3K4me2 and H3K4me3 (PubMed:30712008, PubMed:32572214). Not active on mono-, di- and trimethylated H3K9, H3K27 and H3K36 in somatic cells (PubMed:30712008, PubMed:32572214). However, also active on H3K9 when in complex with MMD1, a meiocyte-specific histone reader (PubMed:32572214). Together with MMD1, promotes gene expression in male meiocytes in an H3K9me3-dependent manner, and contributes to meiotic chromosome condensation by triggering some condensin promoters (e.g. CAP-D3 and CAP-H) (PubMed:32572214). Together with JMJ14 and JMJ17, required for plant growth and development (PubMed:31038749). Represses leaf senescence in an age-dependent manner by demethylating H3K4me3 activating histone marks at senescence-associated genes (SAGs) loci, including WRKY53 and SAG201, thus preventing their premature expression (PubMed:30712008).
messages: Interacts with MMD1 in the nucleus of male meiocytes, especially on pachytene chromosomes.
messages: No visible phenotype under normal growth conditions (PubMed:20202164). Abnormal accumulation of reactive oxygen species (ROS) (PubMed:30712008). Hypermethylation of histone H3 'Lys-4' (H3K4me3) (PubMed:30712008, PubMed:32572214). Enhanced expression of genes involved in leaf senescence (e.g. WRKY53 and SAG201) associated with H3K4me3 leading to an early leaf senescence phenotype (PubMed:30712008, PubMed:32572214). Partial sterility with abnormally short siliques and dead pollen grains leading to silique abortion (PubMed:30712008, PubMed:32572214). Male meiocytes are defective in meiotic chromosome condensation (PubMed:32572214). Slightly early flowering (PubMed:30712008). Increased H3K9me3 levels specifically in male meiocytes leading to greater number of down-regulated than up-regulated genes (PubMed:32572214). The double mutant jmj17-1 jmj16-1 has an early flowering phenotype (especially in long day conditions) (PubMed:31038749).
messages: Nucleus

3702:AT1G77610
gene id: 3702:AT1G77610
uniprot id: A0A178WIX3
uniprot id: Q9C521
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane
messages: Nucleotide sugar transporter that specifically transports UDP-galactose.

3702:AT1G54830
gene id: 3702:AT1G54830
uniprot id: Q9ZVL3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NFYC/HAP5 subunit family.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
messages: Nucleus
messages: Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
messages: Ubiquitous.

3702:AT4G22950
gene id: 3702:AT4G22950
uniprot id: A0A178V3F3
uniprot id: A0A1P8B3X0
uniprot id: O82743
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Decreased response to vernalization, the promotion of flowering by prolonged cold.
messages: Interacts with SOC1 and AGL21.
messages: Maintained at very low levels by the polycomb-group (PcG) proteins MSI1, CLF, and EMF2 via histone methylation (H3K27me3). Derepressed upon cold treatment (vernalization).
messages: Mostly expressed in the outer layers of the root meristem (lateral root cap and epidermis) and in the central cylinder cells of mature roots. Also present in rosette leaves and seedlings and, to a lesser extent, in cauline leaves and flowers. Enriched in apices including the shoot apical meristem and developing leaf primordia.
messages: Nucleus
messages: Probable transcription factor that promotes flowering, especially in response to vernalization by short periods of cold, in an FLC-inpedendent manner.

3702:AT4G12820
gene id: 3702:AT4G12820
uniprot id: Q9SU04
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Abolished brassinosteroid (BR)-induced ASK7/BIN2/SK21 degradation, and BR-insensitivity. Suppression of the constitutive BR-response phenotype in the dominant mutant bzr1-1D, and accumulation of phosphorylated BZR1.
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Required for brassinosteroid (BR) signal transduction. Mediates ASK7/BIN2/SK21 inactivation both by competing with substrate binding (e.g. BZR1) and by promoting its ubiquitination and subsequent proteasomal degradation.
messages: Cytoplasm
messages: Interacts with ASK7/BIN2/SK21.
messages: Nucleus
messages: nucleolus

3702:AT4G18610
gene id: 3702:AT4G18610
uniprot id: Q9SN52
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant homeotic and developmental regulators ALOG protein family.
messages: Nucleus
messages: Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light.

3702:AT4G14880
gene id: 3702:AT4G14880
uniprot id: A0A178V054
uniprot id: P47998
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a major cysteine synthase, probably involved in maintaining organic sulfur level.
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.
messages: Cytoplasm
messages: Homodimer. Interacts with SAT1. Component of the cysteine synthase complex (CSC) composed of two OAS-TL dimers and one SAT hexamer. Interacts with SULTR1;2.
messages: Interaction with the sulfate transporter SULTR1;2 enhances its catalytic activity.
messages: No visible phenotype but displays lower levels of thiols in roots and leaves, and also an affected sulfur balance. Also shows an increased sensitivity to cadmium stress.

3702:AT1G70460
gene id: 3702:AT1G70460
uniprot id: Q9CAL8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Interacts with KIPK1 and KIPK2 (via its cytosolic domain).
messages: Longer root hairs.
messages: Mostly expressed in roots, especially in root hairs.
messages: Regulates negatively root hairs elongation.

3702:AT5G45750
gene id: 3702:AT5G45750
uniprot id: Q9FK68
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT1G50920
gene id: 3702:AT1G50920
uniprot id: Q9C6I8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
messages: Involved in the biogenesis of the 60S ribosomal subunit.
messages: nucleolus

3702:AT3G59590
gene id: 3702:AT3G59590
uniprot id: Q9M1A9
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT1G02300
gene id: 3702:AT1G02300
uniprot id: F4HVZ1
names: Function
names: Induction
names: Similarity
messages: Belongs to the peptidase C1 family.
messages: By dark-induced senescence. Down-regulated by infection with an avirulent strain of the bacterial pathogen Pseudomonase syringae pv. tomato DC3000.
messages: Thiol protease that plays a central role in plant programmed cell death (PCD). In addition to its role in protein degradation, may cleave and/or degrade a number of target proteins, activating signaling towards PCD. Contributes to the increase of caspase-3-like activity after UV-C-induced PCD and is required for abiotic stress-induced PCD (PubMed:27058316). Functions redundantly with CATHB2 and CATHB3 in basal defense and distinct forms of plant programmed cell death (PCD). Participates in the establishment of basal resistance against the bacterial pathogen Pseudomonase syringae pv. tomato DC3000. Required for full levels of PCD during resistance (R) gene-mediated hypersensitive response (HR). Involved in the regulation of senescence, a developmental form of PCD in plants (PubMed:19453434).

3702:AT1G77640
gene id: 3702:AT1G77640
uniprot id: Q9CAP4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G61150
gene id: 3702:AT1G61150
uniprot id: Q84WK5
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GID8 family.
messages: Cytoplasm
messages: Interacts with RANBPM.

3702:AT2G19330
gene id: 3702:AT2G19330
uniprot id: O64566
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the SHOC2 family.
messages: Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.
messages: Widely expressed.

3702:AT3G01200
gene id: 3702:AT3G01200
uniprot id: A0A5S9X8A9
uniprot id: Q9MAC9
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PDRP subfamily.
messages: Bifunctional serine/threonine kinase and phosphorylase involved in the dark/light-mediated regulation of PPDK by catalyzing its phosphorylation/dephosphorylation. Has a much lower phosphotransferase activity than PDRP1 (PubMed:21883547). Can use ADP as a high specificity substrate and GDP as a lower affinity substrate, but has no activity with UDP (PubMed:21414960).
messages: Cytoplasm
messages: Expressed in pollen and seeds.
messages: Interacts with PPDK1.
messages: Regulated by light/dark exposure.
messages: Was thought to be devoided of phosphorylase activity (PubMed:17996018), but possess a much slower rate of phosphotransferase than PDRP1.

3702:AT1G69780
gene id: 3702:AT1G69780
uniprot id: A0A654EP87
uniprot id: Q8LC03
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Nucleus
messages: Predominantly expressed in leaves and flowers.
messages: Probable transcription factor that may act in the sucrose-signaling pathway.
messages: Transcription factor.

3702:AT5G56980
gene id: 3702:AT5G56980
uniprot id: F4K956
names: Induction
names: Subcellular Location Annotation
messages: Membrane
messages: Rapidly induced in local tissues by both compatible and incompatible P.syringae pv. tomato DC3000 strains. Accumulates transiently in systemic tissue after challenge with incompatible P.syringae pv. tomato DC3000(avrRpm1) strain but not with a compatible strains; this systemic induction is abolished by a treatment with the calcium ion channel blocker LaCl(3), thus being dependent of a cytoplasmic calcium burst. Triggered by jasmonic acid (JA) and wounding.

3702:AT1G19770
gene id: 3702:AT1G19770
uniprot id: A0A178WHV5
uniprot id: Q9FXH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Cell membrane
messages: Expressed in seedlings, leaves, embryos, ovules, seeds and the root and shoot meristems. In heart-stage embryos, detected in cells that failed to respond to cytokinins, including the prospective cotyledons.
messages: Membrane
messages: Purine permease implicated in ATP-dependent cytokinin translocation that controls the spatiotemporal landscape of cytokinin signaling. Depletes ligands from the apoplast, which leads to a suppression of the cytokinin response.

3702:AT2G42010
gene id: 3702:AT2G42010
uniprot id: A0A1P8B0W4
uniprot id: P93733
names: Activity Regulation
names: Cofactor
names: Domain
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by wounding, methyl jasmonate, heavy metal, osmotic and salt stresses.
messages: Belongs to the phospholipase D family. C2-PLD subfamily.
messages: C2 domain is a calcium-binding fold, and the binding induces conformational changes, promoting the protein association with membranes. These conformational changes occure at micromolar Ca(2+) concentrations. Exhibits three Ca(2+)-binding sites. Binds also PIP2.
messages: Ca(2+). Requires micromolar level (PIP2-dependent).
messages: Cytoplasm
messages: Expressed in stems, and to a lower amount in leaves, flowers and siliques.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Plays an important role in various cellular processes, including phytohormone action, vesicular trafficking, secretion, cytoskeletal arrangement, meiosis, tumor promotion, pathogenesis, membrane deterioration and senescence. Involved in regulating stomatal movement and plant-water status (PubMed:11722757). Can use phosphatidylserine (PS) and phosphatidylethanolamine (PE) as substrates only in the presence of PIP2. Can use phosphatidylcholine (PC), phosphatidylglycerol (PG) or N-acylphosphatidylethanolamine (NAPE) as substrates in the presence of PE and PIP2 (PubMed:9578608). Modulates defense responses to bacterial and fungal pathogens (PubMed:23577648).
messages: Inhibited by neomycin. Up-regulated by PIP2 binding.
messages: Membrane
messages: Sequencing errors.

3702:AT1G77390
gene id: 3702:AT1G77390
uniprot id: A0A178WDV8
uniprot id: Q9FVX0
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Cytoplasm
messages: Expressed in roots, stems and flowers.
messages: Interacts with CDC20-1, CDC20-2, FZR2/CCS52A1 and FZR1/CCS52A2.
messages: Involved in the regulation of male meiosis progression.
messages: Nucleus
messages: Weakly expressed at zygotene, highly at pachitene and disappears from late diplotene to anaphase. Pronounced peak at the G1/S boundary but does not show mitotic expression.

3702:AT4G17670
gene id: 3702:AT4G17670
uniprot id: Q8VZM9
names: Function
names: Induction
names: Similarity
names: Subunit
messages: Belongs to the FLZ family.
messages: Down-regulated in response to mild as well as prolonged energy depletion (PubMed:26442059). Down-regulated by the glycolysis inhibitor 2DG (PubMed:26442059). Up-regulated by glucose, sucrose and mannose (PubMed:26442059).
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:24600465, PubMed:29945970). Interacts with KINB1, KINB2, KINB3 and SNF4 via its N-terminal part (PubMed:29945970). Forms heterodimer with FLZ7, FLZ10, FLZ11, FLZ12, FLZ15, FLZ17 and FLZ18 in vitro (PubMed:29945970).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.

3702:AT1G12200
gene id: 3702:AT1G12200
uniprot id: A0A178W1K3
uniprot id: A0A1P8AVR0
uniprot id: Q9FWW9
names: Function
names: Similarity
messages: Belongs to the FMO family.
messages: Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates.

3702:AT1G15380
gene id: 3702:AT1G15380
uniprot id: Q9XI31
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in response to abiotic stresses such as cold, heat, drought, oxidative stress, genotoxic compounds, wounding, osmotic stress and UV-B (PubMed:21213008). Slightly induced by salt (NaCl) and nickel ions Ni(2+) (PubMed:30483284, PubMed:21213008). Strongly induced by methylglyoxal (MG) (PubMed:31652571).
messages: Belongs to the glyoxalase I family.
messages: Cell membrane
messages: Cytoplasm
messages: General stress phenotype, characterized by compromised methylglyoxal (MG) scavenging, accumulation of reactive oxygen species (ROS), stomatal closure, and reduced fitness associated with reduced leaf area and dry weight, as well as prolonged flowering time (PubMed:31652571). Increased susceptibility to the pathogenic fungus Plectospherella cucumerina which triggers mainly the jasmonate (JA)-mediated defense signaling pathway (PubMed:31652571). Abnormal cross-talk between salicylic acid (SA) and jasmonic acid (JA) signaling pathways (PubMed:29852537).
messages: Involved in the detoxification and scavenging of methylglyoxal (MG), a cytotoxic aldehyde produced in response to primary metabolism alteration observed during biotic and abiotic stresses (PubMed:31652571). Modulates cross-talk between salicylic acid (SA) and jasmonic acid (JA) signaling pathways during defense responses to pathogens such as Botrytis cinerea (PubMed:29852537).
messages: Mostly expressed in roots, and, to a lower extent, in leaves, flowers, seeds and siliques.

3702:AT3G22000
gene id: 3702:AT3G22000
uniprot id: A0MEX7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT3G02050
gene id: 3702:AT3G02050
uniprot id: A0A654F3B5
uniprot id: Q9LD18
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: By potassium starvation.
messages: Cell membrane
messages: Detected at very low levels in roots, stems, leaves and flowers of mature plants and strongly expressed in the roots of potassium-starved plants.
messages: High-affinity potassium transporter.
messages: Membrane
messages: Potassium transporter.

3702:AT1G16440
gene id: 3702:AT1G16440
uniprot id: F4I4F2
names: Activity Regulation
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by PDPK1/PDK1.
messages: Autophosphorylated and phosphorylated by PDPK1/PDK1.
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
messages: Interacts with PDPK1/PDK1.
messages: Involved in root hair growth and morphogenesis.
messages: Plants over-expressing RHS3 show altered root hair morphology, such as spiral, bent or branched hairs.
messages: Specifically expressed in root hair cells.

3702:AT3G23690
gene id: 3702:AT3G23690
uniprot id: A0A178VLY6
uniprot id: Q9LK48
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer (Probable). Interacts with IBH1.
messages: Nucleus

3702:AT2G40470
gene id: 3702:AT2G40470
uniprot id: A0A178VSB7
uniprot id: A0A1P8B1I4
uniprot id: Q8L5T5
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in young shoots, roots, stems, leaves and flowers.

3702:AT5G66870
gene id: 3702:AT5G66870
uniprot id: Q9FKZ3
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Controls the proximal-distal patterning in petals and the adaxial-abaxial determination of leaves. Involved in the repression of the homeobox gene BP.
messages: Expressed in trichomes, at the base of many lateral organs, including branching points of the inflorescence and floral organs and in the distal part of the pistil at stages when style and stigma start to develop. Also detected in pedicels and at the base of petals and sepals.
messages: No visible phenotype; due to the partial redundancy with AS2. Gain-of-function mutants iso-3D, iso-4D and dsl1-D (T-DNA and transposon tagging) show flowers and siliques bended downwards.

3702:AT1G43650
gene id: 3702:AT1G43650
uniprot id: A0A654EFV8
uniprot id: F4ICR6
uniprot id: Q6NMB7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT4G14450
gene id: 3702:AT4G14450
uniprot id: A0A178V376
uniprot id: Q6NN02
names: Caution
names: Subcellular Location Annotation
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT5G56080
gene id: 3702:AT5G56080
uniprot id: A0A178ULG9
uniprot id: Q9FKT9
names: Function
names: Similarity
messages: Belongs to the nicotianamine synthase (NAS)-like family.
messages: Synthesizes nicotianamine, a polyamine which serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.

3702:AT5G14670
gene id: 3702:AT5G14670
uniprot id: A0A1P8BDK6
uniprot id: A0A384LF04
uniprot id: Q9LYJ3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Arf family.
messages: GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.
messages: Golgi apparatus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G16720
gene id: 3702:AT5G16720
uniprot id: A0A178UCL7
uniprot id: Q0WNW4
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with myosin XI-K.
messages: Membrane
messages: Membrane-anchored myosin receptors that define a distinct, plant-specific transport vesicle compartment.
messages: No visible phenotype. Myob1, myob2 and myob3 triple mutant has a significant height reduction and a delayed flowering. Myob1, myob2, myob3 and myob4 quadruple mutant has a significant height reduction, a reduced rosette diameter and a delayed flowering.
messages: The GTD-binding domain is sufficient for myosin binding.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G41880
gene id: 3702:AT5G41880
uniprot id: F4JZZ1
names: Similarity
messages: Belongs to the eukaryotic-type primase small subunit family.

3702:AT5G04490
gene id: 3702:AT5G04490
uniprot id: A0A1P8BA70
uniprot id: A0A7G2FCC4
uniprot id: Q9LZ76
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 50% reduction in tocopherol content in leaves. Plants able to grow on soil and to produce fertile seeds. Vte5 and vte6 double mutants can grow photoautotrophically and show a stay-green phenotype with strongly delayed senescence and extended lifetime.
messages: Belongs to the polyprenol kinase family.
messages: Highly expressed early in seed development and in 6-week-old senescent leaves.
messages: Kinase involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytol monophosphate (PMP) in the presence of CTP or UTP. No activity with ATP or GTP as phosphoryl donor.
messages: Membrane
messages: chloroplast membrane

3702:AT1G48760
gene id: 3702:AT1G48760
uniprot id: Q9C744
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 3 (AP-3) is a heterotetramer composed of two large adaptins (delta-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit). Binds to EPSIN2.
messages: Belongs to the adaptor complexes large subunit family.
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: No obvious phenotype except defective lytic vacuoles with altered morphology and accumulation of proteins.
messages: Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles.

3702:AT5G39260
gene id: 3702:AT5G39260
uniprot id: A0A654G693
uniprot id: Q9FL81
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
messages: Membrane
messages: cell wall

3702:AT5G45970
gene id: 3702:AT5G45970
uniprot id: A0A178UDV3
uniprot id: Q38903
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the small GTPase superfamily. Rho family.
messages: Cytoplasm
messages: Expressed exclusively in the root, hypocotyl and stem.
messages: Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation.
messages: Membrane

3702:AT5G08490
gene id: 3702:AT5G08490
uniprot id: Q9FNN9
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT2G34880
gene id: 3702:AT2G34880
uniprot id: O64752
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in roots, cotyledons, shoot apex, rosette and cauline leaves, stems, inflorescences and siliques (PubMed:18713399). Expressed at low levels during vegetative growth but to higher levels in young floral organs (PubMed:25009544).
messages: Histone demethylase that demethylates 'Lys-4' (H3K4me) of histone H3 with a specific activity for H3K4me3 (PubMed:22555401). No activity on H3K4me2, H3K4me1, H3K9me3/2, H3K27me3/2 and H3K36me3/2 (PubMed:22555401). Involved in the control of flowering time by demethylating H3K4me3 at the FLC locus and repressing its expression (PubMed:22555401). The repression of FLC level and reduction in H3K4me3 at the FLC locus results in induction of the flowering activator FT, which is a downstream target of FLC (PubMed:22555401). Promotes salt tolerance by down-regulating the expression of several transcriptions factors involved in stress responses via H3K4me3 and H3K4me2 demethylation (PubMed:25009544).
messages: In seedlings, confined at the base of rosette leaves and in root vascular tissues (PubMed:25009544). Accumulates in pericycle cells precursors of lateral root meristems and remains at the base of growing lateral roots, but not in tips (PubMed:25009544). In the inflorescence, strongly expressed in young anthers and present in carpels (PubMed:25009544). Fades out in mature flowers (PubMed:25009544).
messages: No visible phenotype under normal growth conditions (PubMed:20202164, PubMed:22555401, PubMed:25009544). Increased sensitivity to salt (PubMed:25009544).
messages: Nucleus
messages: Plants over-expressing JMJ15 show early flowering phenotype.
messages: Slightly induced by salt.

3702:AT5G24520
gene id: 3702:AT5G24520
uniprot id: Q9XGN1
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Interacts directly with GL3 and BHLH2. Part of a complex made of GL1, GL3 or BHLH2, and TTG1. Interacts with CCT8 (PubMed:21868675).
messages: May regulate MYC transcription factors. Involved in epidermal cell fate specification such as trichome and root hair development, seed mucilage production, and anthocyanin biosynthesis by acting at the dihydroflavonol-4-reductase (DFR) step. Together with GL1 and GL3, promotes trichome formation. Activates the transcription of GL2.
messages: Roots, leaves, stems, meristems, flowers and flower buds.

3702:AT5G62940
gene id: 3702:AT5G62940
uniprot id: A0A178UF22
uniprot id: Q9FM03
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Disruption of interfascicular cambium formation and development in inflorescence stems.
messages: Expressed in the vascular tissues and pericycle of primary roots. Detected in the vasculature of the cotyledons, rosette leaves and cauline leaves. In flowers, localized in vasculature of petals, stigma, and stamen filaments, and, to a lower extent, in anthers and carpels. In inflorescence stems, accumulates in the vasculature, particularly in cambium, phloem, and interfascicular parenchyma cells.
messages: Nucleus
messages: The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) form a short-range concentration gradient that peaks at protophloem sieve elements (PSE) (PubMed:30626969). Preferentially expressed in the vasculature of all organs, including seedlings, roots, stems, buds, leaves, flowers and siliques, and particularly in the cambium, phloem and interfascicular parenchyma cells of inflorescence stems (PubMed:19915089).
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression (PubMed:19915089). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification (PubMed:19915089).

3702:AT1G58643
gene id: 3702:AT1G58643
uniprot id: A0A1P8AUC2
uniprot id: Q93WB3
names: Domain
names: Function
messages: Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
messages: The EXKPK motif is conserved in inositol-pentakisphosphate 2-kinases of both family 1 and 2.

3702:AT3G57990
gene id: 3702:AT3G57990
uniprot id: A0A384LI97
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G19130
gene id: 3702:AT2G19130
uniprot id: O64477
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT2G40480
gene id: 3702:AT2G40480
uniprot id: Q5XVC7
names: Similarity
messages: Belongs to the WEB family.

3702:AT5G01050
gene id: 3702:AT5G01050
uniprot id: A0A178U9W8
uniprot id: Q9LFD1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Lignin degradation and detoxification of lignin-derived products.
messages: Predominantly expressed in roots.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast

3702:AT2G16850
gene id: 3702:AT2G16850
uniprot id: A0A178VPY1
uniprot id: Q9ZVX8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.
messages: Cell membrane
messages: Expressed in roots and floral buds.
messages: Membrane

3702:AT5G15510
gene id: 3702:AT5G15510
uniprot id: A0A1P8BGZ9
uniprot id: F4K9T9
uniprot id: F4K9U0
names: Similarity
messages: Belongs to the TPX2 family.

3702:AT1G07570
gene id: 3702:AT1G07570
uniprot id: A0A178WBM7
uniprot id: F4HQQ0
uniprot id: Q06548
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in stomatal guard cells of leaves.
messages: Interacts with the Xanthomonas campestris effector XopAC/AvrAC.
messages: Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates (PubMed:1450380). May be involved in plant defense signaling (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G13570
gene id: 3702:AT5G13570
uniprot id: A0A654G0P1
uniprot id: Q8GW31
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family. DCP2 subfamily.
messages: Catalytic component of the decapping complex necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Essential for postembryonic development, especially during the formation of the shoot apical meristem (SAM).
messages: Expressed in seedlings, mostly in root tips, root hairs, and the vascular system. Also present in roots, leaves, stems, and flowers.
messages: Gradually accumulates upon germination.
messages: Homodimer. Catalytic component of the decapping complex. Interacts with DCP1, DCP5 and VCS.
messages: Inhibited by the product 7-methyl GDP.
messages: Lethal phenotype at the seedling cotyledon stage that are small and chlorotic, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. Altered RNA decay.
messages: P-body

3702:AT2G03880
gene id: 3702:AT2G03880
uniprot id: Q9SI53
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Mitochondrion

3702:AT5G54650
gene id: 3702:AT5G54650
uniprot id: Q94B77
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the formin-like family. Class-I subfamily.
messages: Expressed in the endosperm. Localizes to the cell plate, a plant-specific membranous component that is assembled at the plane of cell division.
messages: Membrane
messages: Might be involved in the organization and polarity of the actin cytoskeleton. Interacts with the barbed end of actin filaments and nucleates actin-filament polymerization in vitro. Seems to play a role in cytokinesis.

3702:AT4G08039
gene id: 3702:AT4G08039
uniprot id: Q2V3K9
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Could be the product of a pseudogene. Lacks 3 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G17770
gene id: 3702:AT1G17770
uniprot id: A0A5S9UXH8
uniprot id: C0SUW1
uniprot id: Q9C5P1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Although the SET domain contains the active site of enzymatic activity, both pre-SET and post-SET domains are required for methyltransferase activity.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression.
messages: In the pre-SET domain, Cys residues bind 3 zinc ions that are arranged in a triangular cluster; some of these Cys residues contribute to the binding of two zinc ions within the cluster.
messages: Nucleus
messages: centromere

3702:AT3G03740
gene id: 3702:AT3G03740
uniprot id: Q9SRV1
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tdpoz family.
messages: By drought.
messages: Cytoplasm
messages: Interacts with RAP2-4 (PubMed:19843165). Binds to MYB56 at the promoter of FLOWERING LOCUS T (FT) (PubMed:25343985).
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Ubiquitous.

3702:AT4G03960
gene id: 3702:AT4G03960
uniprot id: Q940L5
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein-tyrosine phosphatase family.
messages: Highly expressed in flowers and at lower levels in roots, leaves, stems and siliques.
messages: Plants overexpressing DSP4 exhibit increased sensitivity to infection by the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000.
messages: Probable tyrosine-protein phosphatase that acts as negative regulator of defense responses against the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000.

3702:AT1G80760
gene id: 3702:AT1G80760
uniprot id: Q9SAI4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala/Val (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.
messages: Expressed in roots.
messages: Membrane
messages: Transports glycerol, urea and formamide, in Xenopus laevis oocytes. Very low water transport activity.

3702:AT1G64065
gene id: 3702:AT1G64065
uniprot id: Q6DST1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LEA type 2 family.
messages: Membrane

3702:AT5G52310
gene id: 3702:AT5G52310
uniprot id: Q06738
names: Biotechnology
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates rapidly in leaves, stems, roots, flower petals, filaments, and sepals during cold-acclimation.
messages: An article reported induction by MKK1, MKK2 and MKK3 in response to drought and salt stresses; however, this paper was later retracted.
messages: Belongs to the LTI78/LTI65 family.
messages: Cytoplasm
messages: Enhanced root growth, photosynthesis and water use efficiency (WUE) under salt stress.
messages: Involved in responses to abiotic stresses (PubMed:21374086). Regulates probably root elongation in cold conditions (PubMed:19470100).
messages: Levels follow a circadian cycle with higher levels during the day, in a calcium ion-dependent manner (PubMed:17227550). Triggered by water stress, osmotic stress (e.g. salt and mannitol), diacylglycerol pyrophosphate (DGPP) and abscisic acid (ABA) (PubMed:8148648, PubMed:9418048, PubMed:12694590, PubMed:16463099, PubMed:16766676, PubMed:21374086, PubMed:8448363, PubMed:1830821). Pretreatment with lanthanum, a calcium-channel blocker, prevents mannitol-mediated induction (PubMed:9418048). Induced reversibly by low temperature; by both acute (2-24 hours at 4 degrees Celsius) and chronic (5-6 weeks at 10 degrees Celsius) cold treatments (PubMed:8148648, PubMed:12694590, PubMed:21374086, PubMed:8290624, PubMed:8448363, PubMed:1830821, PubMed:19470100, PubMed:17227550). Levels are correlated with the rate of root elongation in the cold (PubMed:19470100). Induced by the plant growth promoting rhizobacteria (PGPRs) Enterobacter sp. EJ01 (PubMed:24598995). Triggered by WRKY8 during salt stress via direct promoter regulation in a pathway that involves PP2CG1 (PubMed:21374086, PubMed:23451802, PubMed:22627139). Induction by salt is also ethylene-dependent, with the intervention of EIN3 that activates ESE1, the transcription regulator of the pathway (PubMed:21832142). The salt-mediated accumulation involves reactive oxygen species (ROS), ROS-dependent induction being repressed by the NADPH oxidase inhibitor diphenylene iodonium (DPI) (PubMed:21677096). Stimulated reversibly via histone modifications (e.g. enrichment of H3K9ac and H3K4me3) by wounding and water deprivation (PubMed:22983672, PubMed:22505693, PubMed:18779215). Inactivated via histone modifications after rehydration (e.g. removal of H3K9ac and reduction of H3K4me3) (PubMed:22505693). At 22 degrees Celsius, induced synergistically by osmotic stress and ABA. In cold conditions, however, impaired induction by osmotic stress but induced synergistically by cold and ABA (PubMed:9880362).
messages: The cold-inducible promoter of RD29A can be used to improve chill-resistance of crops by triggering the expression of given genes in low temperature conditions (e.g. potato low temperature sweetening).

3702:AT4G37450
gene id: 3702:AT4G37450
uniprot id: Q9FPR2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the lysine-rich AGP family.
messages: Cell membrane
messages: O-glycosylated on the hydroxyproline residues.
messages: Predominantly expressed in flowers, and moderately expressed in roots, stems and young leaves.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT2G44130
gene id: 3702:AT2G44130
uniprot id: A0A178VUS0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G43800
gene id: 3702:AT1G43800
uniprot id: Q84VY3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the fatty acid desaturase type 2 family.
messages: Binds 2 Fe(2+) ions per subunit.
messages: Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons 9 and 10 of the acyl chain.
messages: Homodimer.
messages: chloroplast

3702:AT2G13650
gene id: 3702:AT2G13650
uniprot id: A0A1B0VP09
uniprot id: A0A1P8B1R5
uniprot id: A0A1P8B1R6
uniprot id: Q941R4
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleotide-sugar transporter family. GDP-Mannose:GMP antiporter (GMA) (TC 2.A.7.13) subfamily.
messages: Dwarf phenotype, necrotic lesions and a constitutive hypersensitive response to salicylic acid induction.
messages: Golgi apparatus membrane
messages: Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen (PubMed:11595802, PubMed:20576760, PubMed:27381418). Required for the luminal synthesis of a variety of plant cell surface components (PubMed:11595802). Is required for the correct mannosylation of the glycosylinositol phosphoceramides (GIPC). Can indifferently transport GDP-mannose, GDP-Glucose, GDP-Fucose or GDP-Galactose in vitro (PubMed:23695979, PubMed:27381418).
messages: May be due to intron retention.
messages: Membrane

3702:AT1G71870
gene id: 3702:AT1G71870
uniprot id: A0A178WK04
uniprot id: Q9LE20
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Expressed in the vascular tissue of all organs.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May function as a multidrug and toxin extrusion transporter in the export of IAA-conjugates from the cytoplasm into peroxisomes.
messages: Membrane
messages: Peroxisome membrane

3702:AT2G26380
gene id: 3702:AT2G26380
uniprot id: O48705
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.

3702:AT5G04280
gene id: 3702:AT5G04280
uniprot id: Q8RWN5
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds RNA and DNA sequences non-specifically. May be involved in tolerance to cold stress.
messages: By cold stress.
messages: Expressed in roots, rosette and cauline leaves, stems, floral buds and flowers.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT1G01760
gene id: 3702:AT1G01760
uniprot id: A0A384L5T4
uniprot id: F4HU58
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ADAT1 family.
messages: Binds 1 myo-inositol hexakisphosphate (IP6) per subunit.
messages: Highly expressed in siliques. Expressed at low levels in roots, rosette leaves, cauline leaves, stems and flowers.
messages: Homodimer.
messages: Involved in RNA editing. Catalyzes the specific deamination of adenosine-37 in the cytosolic tRNA-Ala. Generates inosine at the position 3'-adjacent to the anticodon tRNA-Ala.
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit reduced growth rate under cold or heat stresses.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G49120
gene id: 3702:AT3G49120
uniprot id: A0A178VGZ7
uniprot id: Q9SMU8
names: Caution
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Late-induced by Al treatment. Expression increased over 48 hours of Al treatment. Induced by oxidative stress. Up-regulated during a continuous drought stress. Early induced by benzothiadiazol, a chemical analog of salicylic acid. Enhanced expression following both compatible or incompatible pathogen attacks.
messages: May be implicated in the systemic acquired resistance response via the salicylic acid signal transduction pathway. Exhibits a Ca(2+)-pectate binding affinity which could be interpreted in vivo as a specificity to interact with the pectic structure of the cell wall.
messages: Preferentially expressed in roots, but also detected in flowers, leaves and stems.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated during leaf development.
messages: Vacuole

3702:AT5G10230
gene id: 3702:AT5G10230
uniprot id: Q9LX07
names: Domain
names: Induction
names: Similarity
names: Tissue Specificity
messages: A pair of annexin repeats may form one binding site for calcium and phospholipid.
messages: Belongs to the annexin (TC 1.A.31.1) family.
messages: Expressed in flowers.
messages: Up-regulated by cold, heat shock and salt stresses.

3702:AT1G19440
gene id: 3702:AT1G19440
uniprot id: A0A654EM15
uniprot id: Q9LN49
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Expressed at low levels in siliques, flowers, leaves and stems.
messages: Membrane
messages: Repressed by herbicides such as flufenacet and benfuresate.

3702:AT1G10940
gene id: 3702:AT1G10940
uniprot id: A0A178W474
uniprot id: F4I7B6
uniprot id: P43291
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By abscisic acid (ABA), salt, and osmotic stress (at protein level).
messages: Expressed in seedlings.
messages: Interacts with TOPP1.

3702:AT3G62760
gene id: 3702:AT3G62760
uniprot id: A0A178V9A4
uniprot id: Q9LZI9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT1G73730
gene id: 3702:AT1G73730
uniprot id: A0A178VZZ3
uniprot id: A0A1P8AT39
uniprot id: O23116
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EIN3 family.
messages: Interacts with MYB72.
messages: Nucleus
messages: Probable transcription factor that may be involved in the ethylene response pathway.

3702:AT4G32120
gene id: 3702:AT4G32120
uniprot id: Q94A05
uniprot id: W8Q6I0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 31 family.
messages: Expressed in roots, rosette leaves, cauline leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth.
messages: Reduced levels of arabinogalactan proteins.

3702:AT1G54850
gene id: 3702:AT1G54850
uniprot id: A0A178W9U0
uniprot id: Q84K79
names: Induction
names: Similarity
names: Subunit
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Does not interact with IDM1.
messages: Not regulated by heat.

3702:AT5G55630
gene id: 3702:AT5G55630
uniprot id: A0A178URA8
uniprot id: Q8LBL1
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 14-3-3 protein binding is not involved in endoplasmic reticulum export and tonoplast targeting.
messages: Belongs to the two pore domain potassium channel (TC 1.A.1.7) family.
messages: Could be activated by protein kinase C (By similarity). Strongly induced by calcium. Blocked by barium, tetraethylammonium (TEA), quinine and quinidine.
messages: Detected in mesophyll cells, guard cells and vascular tissues of the leaves. Expressed in the hilum, where the funiculus is attached during fruit maturation and in the embryo. Also expressed at a lower level in seedlings, root tips and elongation zones, and flowers. Could be detected in mitotically active tissues.
messages: Each of the two pore-forming region (also called P-domain or P-loop) is enclosed by two transmembrane segments (2P/4TM) and contains the GYGD signature motif which seems to be involved in potassium selectivity. The C-terminus (328-363) is required for vacuolar targeting.
messages: Homodimer. Interacts with GRF1 and GRF6, but only GRF6 modulates the channel activity.
messages: Membrane
messages: Phosphorylation at Ser-42 increases and stabilizes the interaction with 14-3-3 proteins.
messages: Reduced growth in both high and low K(+) conditions. Slower germination and increased sensitivity to abscisic acid. Reduction of the total tonoplast current density.
messages: Vacuole membrane
messages: Voltage-independent, large conductance and potassium-selective tonoplast ion channel. Regulated by cytoplasmic calcium and pH. Does not mediate slow-vacuolar (SV) ionic currents, but essential to establish VK currents. Has some permeability for Rb(+) and NH(4)(+), but none for Na(+), Cs(+) or Li(+). Involved in intracellular K(+) redistribution and/or K(+) retranslocation between different tissues.
messages: Was initially described as an outward slow-vacuolar (SV) ion channel (PubMed:9184204 and PubMed:11821043).

3702:AT3G17970
gene id: 3702:AT3G17970
uniprot id: Q9LVH5
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Chaperone receptor mediating Hsp90-dependent protein targeting to chloroplasts. Bi-functional preprotein receptor acting on both sides of the membrane. Not essential for an efficient import of pre-proteins into plastids.
messages: Expressed in roots, cotyledons, leaves and flower buds.
messages: No visible phenotype.
messages: Part of the Toc complex and of the intermembrane space complex.
messages: The transmembrane domain and its C-terminal lysine-rich flanking region (LFR) (26-61) are both necessary and sufficient for targeting to the outer envelope membrane.
messages: chloroplast outer membrane

3702:AT5G58830
gene id: 3702:AT5G58830
uniprot id: Q9FIM6
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: The C-terminal propeptide is autocleaved.

3702:AT3G25717
gene id: 3702:AT3G25717
uniprot id: Q6IM95
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT3G53740
gene id: 3702:AT3G53740
uniprot id: A0A178VA59
uniprot id: Q9M352
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL36 family.

3702:AT4G16230
gene id: 3702:AT4G16230
uniprot id: O23470
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT5G53220
gene id: 3702:AT5G53220
uniprot id: A0A384LCQ6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G36570
gene id: 3702:AT2G36570
uniprot id: Q9SJQ1
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in the vascular strands of cotyledons, the shoot apex, hypocotyls, roots, leaves, stems and flowers.
messages: Leucine-rich repeat receptor-like protein kinase involved in secondary cell wall formation in xylem fibers. May play a role in a regulatory network which also incorporates the TDR/PXY signaling pathway and regulates the maturation of interfascicular fiber cells. May promote the initiation of secondary cell wall deposition during the procedure of cell expansion.
messages: No visible phenotype under normal growth conditions, but under short day conditions inflorescence stems of mutant plants show dramatic reduction of secondary cell wall formation in xylem fibers, leading to the inability of the stems to support an upright growth.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT5G10720
gene id: 3702:AT5G10720
uniprot id: Q3S4A7
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By H(2)O(2).
messages: Cell membrane
messages: Cytoplasm
messages: Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. Negative regulator of the ETR1-dependent abscisic acid (ABA) and ethylene signaling pathway that inhibits the root elongation. Promotes stomatal closure. Regulates stomatal opening by integrating multiple signals via hydrogen peroxide H(2)O(2) homeostasis in guard cells in an ABA-independent manner. May contribute to basal defense mechanisms by closing stomata in the presence of bacterial pathogens. Regulates both hormone levels and ROS production in response to stress. Required for full immunity to bacterial pathogen and necrotrophic fungus.
messages: Hypersensitive to abscisic acid (ABA) and ethylene (ACC) in roots. Reduced stomatal closure in response to H(2)O(2), bacterial pathogen associated molecular pattern (PAMP) flagellin, Pseudomonas syringae, darkness, nitric oxide and ethylene, but normal closure in response to ABA and the peptide elf. Increased sensitivity to pathogens and increased tolerance to high salinity.
messages: Interacts with AHP1, APH2, APH3, APH5 and APH6, but not with APH4.
messages: Present in light-grown but not in etiolated seedlings. Mostly expressed in roots flowers and siliques, and, to a lower extent, in stems and leaves, especially in guard cells.

3702:AT5G15540
gene id: 3702:AT5G15540
uniprot id: A5HEI1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SCC2/Nipped-B family.
messages: Defective embryo arrested at preglobular/early globular stage with the formation of giant endosperm nuclei (PubMed:19228337, PubMed:15266054, PubMed:28137757). Suspensor overproliferation phenotype preceded by ectopic auxin maxima distribution (PubMed:28137757). Reduced sister chromatid cohesion (PubMed:19533160). In conditional RNAi plants, sterility, arising from several defects in meiotic chromosome organization (e.g. failure of homologous pairing, loss of sister-chromatid cohesion, mixed segregation of chromosomes and chromosome fragmentation) and leading to shrunken and inviable pollen grains, and degeneration of the embryo sac. In the meiocytes, aberrant distribution of the cohesin subunit SCC3 on chromosomes, and defects in chromosomal axis formation (PubMed:19228337).
messages: Detected throughout the embryo, covering all stages of development from pre-globular to torpedo stages. Also detected in the suspensor and endosperm.
messages: Essential protein required for cell fate determination during embryogenesis (PubMed:19228337, PubMed:15266054, PubMed:28137757). Involved in sister chromatid cohesion during meiosis and mitosis (PubMed:19228337, PubMed:19533160). Forms a complex with SCC4, which is required for the association of the cohesin complex with chromosomes (PubMed:28137757). Plays a structural role in chromatin, especially in centromere organization, chromosomal axis formation, and distribution of the cohesin subunit SCC3 on chromosomes (PubMed:19228337).
messages: Expressed in leaves, inflorescence and siliques.
messages: Interacts with SCC4 to form the cohesin loading complex.
messages: Nucleus
messages: centromere

3702:AT1G06180
gene id: 3702:AT1G06180
uniprot id: Q9LNC9
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots and flowers. Expressed in shoot apex, axillary buds, at the basis of flowers and branching points of inflorescences.
messages: Induced by abscisic acid (ABA), drought, light and wounding in leaves. Down-regulated by drought and ABA in roots.
messages: Nucleus
messages: Plants expressing ectopically MYB13 display peculiar hook structure at pedicel branching points, and a reversed order of first flowers and axillary buds.
messages: Plays a regulatory role in meristem function. Functions as component of a regulatory network controlling the establishment and/or development of the shoot system by the regulation of apical meristem function (PubMed:9681014). May play a role in tolerance to boric acid (PubMed:16861809).

3702:AT4G08700
gene id: 3702:AT4G08700
uniprot id: Q8RY83
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT4G35730
gene id: 3702:AT4G35730
uniprot id: F4JNS8
names: Similarity
messages: Belongs to the IST1 family.

3702:AT2G31370
gene id: 3702:AT2G31370
uniprot id: Q04088
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bZIP family.
messages: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants.
messages: Nucleus
messages: Putative transcription factor with an activatory role.

3702:AT1G50420
gene id: 3702:AT1G50420
uniprot id: A0A178WJ79
uniprot id: Q9LPR8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Binds to zinc finger proteins MGP/IDD3, IDD4, IDD5, BIB/IDD9 and JKD/IDD10.
messages: Expressed in seedlings, root epidermis, leaves, flowers and siliques.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT2G05630
gene id: 3702:AT2G05630
uniprot id: A0A178VRR4
uniprot id: F4IHC1
uniprot id: Q9SL04
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG8 family.
messages: Constitutively expressed.
messages: Interacts with ATG4B (PubMed:15178341). Interacts with NBR1 (PubMed:21606687).
messages: The C-terminal 3 residues are removed by ATG4 to expose Gly-117 at the C-terminus. This Gly-117 forms then a thioester bond with the 'Cys-558' of ATG7 (E1-like activating enzyme) before being transferred to the 'Cys-258' of ATG3 (the specific E2 conjugating enzyme), in order to be finally amidated with phosphatidylethanolamine. This lipid modification anchors ATG8 to autophagosomes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
messages: Vacuole membrane
messages: autophagosome membrane
messages: cytoskeleton

3702:AT4G24730
gene id: 3702:AT4G24730
uniprot id: A0A178V355
uniprot id: Q9SB68
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ADPRibase-Mn family.
messages: Hydrolyzes ADP-ribose, IDP-ribose, CDP-glycerol, CDP-choline and CDP-ethanolamine, but not other non-reducing ADP-sugars or CDP-glucose.
messages: Monomer.

3702:AT1G13430
gene id: 3702:AT1G13430
uniprot id: Q9FX55
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Expressed in roots and leaves.
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor. No activity with brassinosteroids.
messages: Up-regulated by trans-zeatin.

3702:AT3G49660
gene id: 3702:AT3G49660
uniprot id: Q9M2Z2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Eearly flowering (PubMed:23284292). Decreased TATA-binding protein (TBP) levels lower Ser5P Pol II levels near the transcription start sites (TSSs) of target genes and of Pol II at the genes 3'-ends thus affecting the transition from transcription initiation to transcription elongation (PubMed:23284292). Significantly reduced trimethylated 'Lys-4' of histone H3 (H3K4me3) levels at the 5'-ends of WRKY70 and LTP7 genes leading to reduced transcript accumulation (PubMed:23284292).
messages: Forms multiple COMPASS-like complexes involved in histone methylation by interacting with different histone H3 'Lys-4' methyltransferases such as ATX1, SDG14 or SDG16 (PubMed:21423667). Binds to target loci chromatin, increasing H3K4 trimethylation and causing activation of the gene (PubMed:19567704). Up-regulates FLC and MAF4 expression to delay flowering (PubMed:19567704). Present at the promoters and at the transcription start sites (TSS) regions of WRKY70 and LTP7; this occupancy is ATX1-dependent (PubMed:23284292). Involved in the transition from transcription initiation to transcription elongation (PubMed:23284292).
messages: Nucleus
messages: Part of a complex composed of TRO, RBL and WDR5A (PubMed:21423667). This complex is formed during both vegetative and reproductive development (PubMed:21423667). Interacts with SDG14, SDG16, RBL, but not with TRO (PubMed:21423667). Interacts with ATX1 and K4-methylated H3 tails (PubMed:19567704).
messages: Strongly expressed in developing embryos and endosperms (PubMed:21423667). Expressed in shoot and root apical regions, and in vasculature (PubMed:19567704).

3702:AT3G26420
gene id: 3702:AT3G26420
uniprot id: Q9LIN3
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds RNA and DNA sequences with a preference to single-stranded nucleic acids. Displays strong affinity to poly(G) and poly(U) sequences. May be involved in tolerance to cold stress.
messages: By cold stress.
messages: Cytoplasm
messages: Expressed in roots, leaves, stems and flowers.
messages: No visible phenotype under normal growth conditions, but germination of mutant seeds is strongly delayed under low temperature conditions.
messages: Nucleus
messages: Plants over-expressing RZ1A have enhanced freezing tolerance.

3702:AT4G12570
gene id: 3702:AT4G12570
uniprot id: Q9SU29
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accelerated senescence.
messages: Belongs to the UPL family.
messages: By jasmonate. Down-regulated by hydrogen peroxide.
messages: Cytoplasm
messages: E3 ubiquitin protein ligase that regulates leaf senescence through ubiquitination and subsequent degradation of WRKY53.
messages: Interacts with WRKY53.

3702:AT5G48480
gene id: 3702:AT5G48480
uniprot id: Q9LV66
names: Subunit
messages: Homodimer.

3702:AT1G69560
gene id: 3702:AT1G69560
uniprot id: Q9SEZ4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in organ boundaries.
messages: No visible phenotype under normal growth conditions, but the double mutants lof1 and lof2 exhibit enhanced phenotypes relative to lof1.
messages: Nucleus
messages: Probable transcription factor that involved in boundary specification, meristem initiation and maintenance, and organ patterning. Functions in both lateral organ separation and axillary meristem formation.

3702:AT1G16980
gene id: 3702:AT1G16980
uniprot id: A0A654EC27
uniprot id: Q9FZ57
names: Similarity
messages: In the C-terminal section; belongs to the trehalose phosphatase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 20 family.

3702:AT1G36980
gene id: 3702:AT1G36980
uniprot id: A0A384KWC9
uniprot id: Q949Z8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0220 family.
messages: Membrane

3702:AT5G10910
gene id: 3702:AT5G10910
uniprot id: A0A654G0G1
uniprot id: Q9LEU9
names: Similarity
messages: Belongs to the methyltransferase superfamily. RsmH family.

3702:AT4G14480
gene id: 3702:AT4G14480
uniprot id: O23304
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
messages: Defective in leaf temperature decreases and stomatal opening in response to blue light.
messages: Expressed in guard cells. Not detected in mesophyll cells.
messages: Interacts with PHOT1 in the presence and absence of blue light.
messages: Phosphorylated at Ser-348 by both PHOT1 and PHOT2.
messages: Ser/Thr protein kinase mediating a primary step for phototropin signaling in guard cells. Essential for stomatal opening.
messages: cytosol

3702:AT1G67960
gene id: 3702:AT1G67960
uniprot id: F4HVJ3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TAPT1 family.
messages: Defective in micropylar pollen tube guidance leading to zygotic lethality.
messages: Endoplasmic reticulum lumen
messages: Expressed in inflorescences, siliques, roots and shoots. Expressed in early embryo, endosperm, mature pollen and pollen tubes, synergide cells and weakly in antipodal cells.
messages: Interacts with CRT3, but not with CRT1 or CNX.
messages: Membrane
messages: Probable component of the calreticulin 3 (CRT3) complex, acting probably as a co-chaperone involved in protein retention in the endoplasmic reticulum lumen. Required for micropylar pollen tube guidance. Plays an essential role in cell plate orientation or positioning in early embryo patterning.

3702:AT1G69910
gene id: 3702:AT1G69910
uniprot id: A0A654EML2
uniprot id: F4I3V3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Membrane

3702:AT1G77840
gene id: 3702:AT1G77840
uniprot id: A0A178W8M9
uniprot id: Q9S825
names: Function
names: PTM
names: Similarity
messages: Belongs to the eIF-2-beta/eIF-5 family.
messages: Catalyzes the hydrolysis of GTP bound to the 40S ribosomal initiation complex (40S.mRNA.Met-tRNA[F].eIF-2.GTP) with the subsequent joining of a 60S ribosomal subunit resulting in the release of eIF-2 and the guanine nucleotide. The subsequent joining of a 60S ribosomal subunit results in the formation of a functional 80S initiation complex (80S.mRNA.Met-tRNA[F]) (By similarity).
messages: Phosphorylated at Ser-201, Thr-230, Ser-428, Ser-431, and Ser-433 by CK2.

3702:AT1G43160
gene id: 3702:AT1G43160
uniprot id: Q7G1L2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Expressed in petals, carpels and valves of immature siliques (PubMed:21069430). Expressed at high levels in stems. Expressed in roots, rosette leaves, flowers and siliques (PubMed:20193749, PubMed:23510309).
messages: Induced by salt, heat and drought stresses (PubMed:21069430). Induced by osmotic stress (PubMed:20193749). Induced by jasmonate (JA) (PubMed:21069430, PubMed:14756769, PubMed:17786451). Induced by salicylic acid (SA) (PubMed:14756769, PubMed:21069430). Induced by abscisic acid (ABA) (PubMed:20193749, PubMed:21069430). Induced by ethylene (PubMed:14756769). Induced by infection with the bacterial pathogen Pseudomonas syringae pv. tomato DC3000 (PubMed:14756769, PubMed:23510309). Induced by the bacterial pathogen Pseudomonas syringae pv. maculicola ES4326 (PubMed:14756769). Induced by wounding (PubMed:17786451). Down-regulated by infection with the beet cyst nematode Heterodera schachtii (PubMed:23510309).
messages: Nucleus
messages: Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Binds to the GCC-box pathogenesis-related promoter element and the cis-element CE1 (coupling element 1). Involved in the regulation of gene expression in response to abiotic stresses, possibly through the abscisic acid (ABA) signaling pathway (PubMed:20193749). Involved in resistance to the beet cyst nematode Heterodera schachtii in roots. May promote callose deposition at syncytia which may interfere with nutrient import into syncytia and inhibit the development of nematodes (PubMed:23510309).

3702:AT2G22360
gene id: 3702:AT2G22360
uniprot id: Q9SJZ7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaJ family.
messages: Induced by heat stress.
messages: May function together with HSC70 chaperone to assist protein folding and prevent protein aggregation during heat stress in the chloroplast.
messages: chloroplast

3702:AT4G18300
gene id: 3702:AT4G18300
uniprot id: A0A654FQY7
uniprot id: O49733
names: Similarity
messages: Belongs to the eIF-2B gamma/epsilon subunits family.

3702:AT4G21470
gene id: 3702:AT4G21470
uniprot id: Q84MD8
names: Function
names: Similarity
names: Subunit
messages: Bifunctional enzyme that catalyzes the hydrolysis of flavin-mononucleotide (FMN) to riboflavin (vitamin B2) and the phosphorylation of riboflavin to form (FMN) coenzyme.
messages: In the C-terminal section; belongs to the flavokinase family.
messages: In the N-terminal section; belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
messages: Monomer.

3702:AT1G26840
gene id: 3702:AT1G26840
uniprot id: A0A178WC62
uniprot id: Q9ZVH3
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ORC6 family.
messages: Component of the origin recognition complex (ORC) composed of at least ORC1 (ORC1A or ORC1B), ORC2, ORC3, ORC4, ORC5 and ORC6. ORC is regulated in a cell-cycle and development dependent manner. It is sequentially assembled at the exit from anaphase of mitosis and disassembled as cells enter S phase. Interacts directly with ORC2, ORC3, ORC4 and ORC5.
messages: Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent. The specific DNA sequences that define origins of replication have not been identified yet. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
messages: Follow a cell-cycle regulation with a peak at the G1/S-phase (PubMed:16179646). Mostly expressed in siliques, flowers, flower buds and mature leaves, and, to a lower exent, in roots, leaves and stems (PubMed:16179646, PubMed:15358564).
messages: Nucleus
messages: Regulated by E2F (PubMed:16179646, PubMed:16126853). Accumulates rapidly after cell cycle reactivation by sucrose addition following cell cycle arrest mediated by sucrose deprivation (PubMed:16179646, PubMed:15358564).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G32080
gene id: 3702:AT1G32080
uniprot id: A0A178WQL6
uniprot id: Q9FVQ4
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CidB/LrgB family.
messages: Expressed in leaves, stems and flowers, but not in roots.
messages: Glycolate/glycerate transporter required for photorespiration.
messages: Interveinal chlorotic and premature necrotic leaves. Bleached leaf phenotype when grown under ambient air, but normal growth under CO(2)-enriched air.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Was initially thought to be involved in chloroplast development or function against cell death (PubMed:21916894 and PubMed:22180599).
messages: chloroplast membrane

3702:AT2G33640
gene id: 3702:AT2G33640
uniprot id: A0A178VPS5
uniprot id: Q6DR03
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cell membrane
messages: Membrane
messages: S-acyltransferase involved in protein lipid modification.
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT3G44300
gene id: 3702:AT3G44300
uniprot id: A0A384LD03
uniprot id: P32962
uniprot id: Q1LYZ1
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Barely detectable in young rosettes, but is strongly expressed during bolting, flowering, and especially fruit development.
messages: Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family.
messages: By indole-3-acetonitrile, abscisic acid (ABA), salicylic acid (SA), sodium nitroprusside (SNP), salt stress and dehydration stress.
messages: Can convert indole-3-acetonitrile to the plant hormone indole-3-acetic acid.
messages: Cell membrane

3702:AT3G10195
gene id: 3702:AT3G10195
uniprot id: Q2V3X3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G36300
gene id: 3702:AT5G36300
uniprot id: Q9FFZ2
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G47100
gene id: 3702:AT5G47100
uniprot id: A0A1P8BBZ1
uniprot id: A0A654G8R2
uniprot id: Q9LTB8
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a calcium sensor involved in abscisic acid (ABA) signaling and stress-induced ABA biosynthesis pathways. Contributes to the regulation of early stress-related CBF/DREB transcription factors. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. May function as a negative regulator of stress and ABA responses. Mediates the activation of AKT1 by CIPK proteins (CIPK6, CIPK16, and CIPK23) in response to low potassium conditions and in the context of stomatal movement. Involved in the calcium-dependent regulation by CIPK26 of reactive oxygen species production by the NADPH oxidase RBOHF. The CBL9/CIPK3 complex acts in the regulation of abscisic acid response in seed germination.
messages: Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
messages: Belongs to the calcineurin regulatory subunit family.
messages: Both N-myristoylation and calcium-mediated conformational changes are essential for its function.
messages: By drought, cold, salt and abscisic acid (ABA) treatments.
messages: Cell membrane
messages: Homodimer (By similarity). Part of a K(+)-channel calcium-sensing kinase/phosphatase complex composed by a calcium sensor CBL (CBL1, CBL2, CBL3 or CBL9), a kinase CIPK (CIPK6, CIPK16 or CIPK23), a phosphatase PP2C (AIP1) and a K(+)-channel (AKT1). Interacts with CIPK1, CIPK3, CIPK6, CIPK8, CIPK14, CIPK16, CIPK18, CIPK21, CIPK23, CIPK24 and CIPK26.
messages: Homodimer. Interacts with CIPK.
messages: Hypersensitivity to abscisic acid in the early developmental stages.
messages: Membrane
messages: The N-terminal 12 amino acids are sufficient for cell membrane targeting.
messages: Ubiquitous. Colocalized with CIPK23 in root tips and vascular bundles in the stem and the leaf, as well as in guard cells and root hairs.

3702:AT5G53300
gene id: 3702:AT5G53300
uniprot id: A0A178UMJ1
uniprot id: F4KJ37
uniprot id: P35133
names: Function
names: Sequence Caution
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Mediates the selective degradation of short-lived and abnormal proteins.
messages: Artifacts of PCR amplification. Originally thought to be UBC12 isoform.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Interacts with CHIP and the E3 ubiquitin ligase BB. Associates with the E3 ubiquitin ligase JMJ24 (PubMed:26979329).
messages: Ubiquitously expressed with the highest levels in rosette leaves, roots and petals.

3702:AT1G56700
gene id: 3702:AT1G56700
uniprot id: A0A384L4H7
uniprot id: A8MSE7
uniprot id: Q9FXC0
names: Similarity
messages: Belongs to the peptidase C15 family.

3702:AT4G10710
gene id: 3702:AT4G10710
uniprot id: A0A178UXH6
uniprot id: A0A1P8B6H4
uniprot id: O82491
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although related to the peptidase M24 family, this protein lacks conserved active site residues suggesting that it may lack peptidase activity.
messages: Belongs to the peptidase M24 family. SPT16 subfamily.
messages: Chromosome
messages: Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II (Probable).
messages: Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II.
messages: Component of the FACT complex, a stable heterodimer of SPT16 and SSRP.
messages: Component of the FACT complex.
messages: Nucleus
messages: Widely expressed. Present in embryos, shoots and roots, whereas it is not present in terminally differentiated cells such as mature trichoblasts or cells of the root cap (at protein level).

3702:AT3G04150
gene id: 3702:AT3G04150
uniprot id: A0A178VIP2
uniprot id: F4J3K8
uniprot id: Q9M8X1
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: Sequencing errors.
messages: apoplast

3702:AT5G02560
gene id: 3702:AT5G02560
uniprot id: A0A384LGA5
uniprot id: F4KCF4
uniprot id: Q1H552
uniprot id: Q9LZ46
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Contains one SPKK motif which may interact with the minor groove of A/T-rich DNA sites. Phosphorylation of this motif may regulate DNA binding. This motif is reiterated in both termini of histone H1 and in the N-terminus of sea urchin histones H2B, but its presence in the C-terminus seems to be unique to plant H2A.
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Not ubiquitinated.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3702:AT3G11020
gene id: 3702:AT3G11020
uniprot id: M4VR86
uniprot id: O82133
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By high-salt and drought stresses.
messages: Expressed preferentially in roots and stems, and at a lower level in leaves.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription.

3702:AT1G28420
gene id: 3702:AT1G28420
uniprot id: F4HY56
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Highly expressed in growing tissues such as inflorescence and flower meristems, young leaves and floral organs. Expressed in roots, rosette and cauline leaves, stems, flowers, inflorescences and siliques.
messages: Interacts with CHR11 and CHR17 (PubMed:22694359). Interacts (via the DDT domain) with CHR11 (via C-terminus) (PubMed:23691993).
messages: No visible phenotype under normal growth conditions, but the double mutant plants rlt-1 and rlt2-1 are small and display early flowering.
messages: Nucleus
messages: Transcriptional regulator required for the maintenance of the plant vegetative phase. In association with CHR11 or CHR17 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC.

3702:AT3G27100
gene id: 3702:AT3G27100
uniprot id: Q6NQ54
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ENY2 family.
messages: Component of a deubiquitination module (DUB module) formed by ENY2, SGF11, and UBP22 in Arabidopsis (PubMed:29588169, PubMed:30192741). Interacts directly with SGF11, but not with UBP22 (PubMed:29588169, PubMed:30192741). Interacts with MOS4 (PubMed:29588169).
messages: Component of a deubiquitination module (DUB module) that specifically deubiquinates monoubiquinated histone H2B (H2Bub) (PubMed:29588169, PubMed:30192741). Does not seem to be a component of the TREX-2 complex (PubMed:29588169). Seems to act independently of the SAGA multiprotein complex (PubMed:30192741). The DUB module is responsible for the major H2Bub deubiquitinase activity in Arabidopsis (PubMed:30192741).
messages: Expressed in roots, cotyledons, leaves and upper part of sepals.
messages: nucleoplasm

3702:AT3G44240
gene id: 3702:AT3G44240
uniprot id: A0A654FCM2
uniprot id: Q9LXM4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.

3702:AT3G21740
gene id: 3702:AT3G21740
uniprot id: Q1EC50
uniprot id: Q9LSZ0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the APO family.
messages: May be involved in the stable assembly of several 4Fe-4S cluster-containing complexes of mitochondria.
messages: Mitochondrion
messages: The APO motifs may provide ligands for 4Fe-4S centers.

3702:AT5G35580
gene id: 3702:AT5G35580
uniprot id: F4JZW1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Down-regulated during infection by Plasmodiophora brassicae.
messages: Interacts with RBHOD. Interaction is disrupted by flagellin-induced immune signaling.
messages: Involved in defense responses. Acts as negative regulator of plant immune responses.
messages: No visible phenotype under normal growth conditions. Mutant plants exhibit enhanced disease resistance after inoculation with virulent Pseudomonas syringae, elevated basal-level expression of the PR1 defense marker gene, enhanced reactive oxygen species (ROS) burst in response to perception of bacterial microbial patterns, and accelerated flagellin-induced activation of MAP kinases.

3702:AT5G47720
gene id: 3702:AT5G47720
uniprot id: A0A178UN67
uniprot id: A0A384KT84
uniprot id: F4JYM8
uniprot id: Q3E8F0
uniprot id: Q9FIK7
names: Caution
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thiolase-like superfamily. Thiolase family.
messages: Cytoplasm
messages: May be due to an intron retention.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G33810
gene id: 3702:AT2G33810
uniprot id: A0A178W1W0
uniprot id: P93015
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Expressed in vegetative and inflorescence apical meristems, floral meristems, leaf and flower organ primordia, inflorescence stem tissue and to lower extent in roots.
messages: Increases during floral transition and stay high thereafter.
messages: It is uncertain whether Met-1 or Met-3 is the initiator.
messages: Negatively regulated by microRNAs miR156.
messages: Nucleus
messages: Plants flower early and have a significantly reduced number of juvenile, adult and cauline leaves, with a shorter petiole and a more acute leaf base in the first two leaves.
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Binds specifically to the 5'-GTAC-3' core sequence. Promotes both vegetative phase change and flowering. Regulates phase-specific patterns of leaf epidermal differentiation and flowering time, but does not seem to affect leaf shape.

3702:AT3G10610
gene id: 3702:AT3G10610
uniprot id: A0A178V778
uniprot id: Q9SQZ1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS17 family.

3702:AT2G37170
gene id: 3702:AT2G37170
uniprot id: A0A1P8AYA1
uniprot id: P43287
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.
messages: Cell membrane
messages: Membrane
messages: Predominantly expressed in the root, with a strong expression in the cortex, endodermis, and stele.
messages: Water channel required to facilitate the transport of water across cell membrane. Plays an predominant role in root water uptake process in conditions of reduced transpiration, and in osmotic fluid transport. Its function is impaired by Hg(2+). Inhibited by cytosolic acidosis which occurs during anoxia in roots.

3702:AT2G28840
gene id: 3702:AT2G28840
uniprot id: Q94B55
names: Function
messages: No E3 ubiquitin-protein ligase activity observed when associated with the E2 enzyme UBC8 in vitro.

3702:AT2G45400
gene id: 3702:AT2G45400
uniprot id: O22133
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abnormal organs elongation leading to long inflorescences, leaves and petioles, especially in the light.
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Cytoplasm
messages: Down-regulated in the dark.
messages: Element of the brassinosteroid metabolic pathway that regulates typhasterol (TY), castasterone (CS) and brassinolide (BL) levels (PubMed:17521414). Involved in the control of organ elongation (PubMed:17521414, PubMed:23893742).
messages: First observed after seed germination, mainly in the root cap, and in elongation and maturation zones, and, to a lower extent, in the apical meristem zone. Later present in roots, with higher levels in light conditions than in darkness. Weak levels in young flowers. Progressive accumulation in developing siliques, at both ends. In rosette leaves, mainly localized in vascular tissues and hydathodes.
messages: Mainly present in cell elongating-containing tissues. Strongly expressed in roots and flowers, also observed in petioles, stems, leaves and siliques.
messages: Monomer.
messages: The ben1-1D (bri1-5 enhanced 1-1dominant) activation-tagging mutant suppresses the bri1-5 weak mutant allele of the brassinosteroid receptor gene BRI1.

3702:AT4G04840
gene id: 3702:AT4G04840
uniprot id: A0A178V4R5
uniprot id: Q8GWF4
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer (By similarity).
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT4G20970
gene id: 3702:AT4G20970
uniprot id: A0A178UYG1
uniprot id: F4JIJ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bHLH protein family.
messages: Nucleus

3702:AT2G34150
gene id: 3702:AT2G34150
uniprot id: A0A1P8B1T4
uniprot id: A0A5S9X3S3
uniprot id: F4IGW2
uniprot id: Q6AWX6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activates the Arp2/3 complex and binds actin through the C-terminal VCA (verprolin homology/cofilin homology/acidic) domain consisting of a WH2 domain followed by an Arp2/3-binding acidic motif (A), separated by a conserved linker region (C). Binds BRK1 through the N-terminal Scar homology domain (SHD).
messages: Belongs to the SCAR/WAVE family.
messages: Binds BRK1 and actin. Interacts with SPK1, ABI1 and ABI2.
messages: Expressed in expanding cotyledons, expanding leaves and expanding siliques containing developing embryos. Detected in unopened flower buds and in the expanding tip region of roots. Reduced expression in mature leaves and mature cotyledons.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex. Regulates trichome branch positioning and expansion.
messages: cytoskeleton

3702:AT4G18425
gene id: 3702:AT4G18425
uniprot id: A0A178UUN1
uniprot id: Q8L928
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in tissues undergoing senescence and abscission.
messages: Belongs to the plant DMP1 protein family.
messages: Expressed in leaves, flowers and siliques, especially in vascular tissues.
messages: Involved in membrane remodeling.
messages: Vacuole membrane

3702:AT3G61990
gene id: 3702:AT3G61990
uniprot id: A0A654FJX0
uniprot id: Q9M266
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family.

3702:AT2G16970
gene id: 3702:AT2G16970
uniprot id: A0A1P8AX75
uniprot id: A0A1P8AX77
uniprot id: A0A1P8AXB0
uniprot id: A0A1P8AXB4
uniprot id: A0A1P8AXC3
uniprot id: F4IMD6
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G31520
gene id: 3702:AT4G31520
uniprot id: A0A1P8B4Q7
uniprot id: Q9M082
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SDA1 family.
messages: Required for 60S pre-ribosomal subunits export to the cytoplasm.
messages: nucleolus

3702:AT1G32127
gene id: 3702:AT1G32127
uniprot id: A0A1P8APW5
uniprot id: A0A384L270
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM45 family.
messages: Membrane

3702:AT5G50750
gene id: 3702:AT5G50750
uniprot id: A0A384KVV6
uniprot id: Q9LUE6
uniprot id: W8QN51
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RGP family.
messages: Golgi apparatus
messages: Heteromers with RGP1 and RGP2.
messages: Probable UDP-L-arabinose mutase involved in the biosynthesis of cell wall non-cellulosic polysaccharides.
messages: Reversibly glycosylated in vitro by UDP-glucose, UDP-xylose and UDP-galactose, but not UDP-mannose.
messages: Specifically expressed in developing seeds.
messages: The conserved DXD motif is involved in enzyme activity.
messages: cytosol

3702:AT5G42580
gene id: 3702:AT5G42580
uniprot id: A0A5S9YA94
uniprot id: Q9FH67
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: May be involved in hydroxylation of the triterpene marneral.
messages: Membrane

3702:AT1G20620
gene id: 3702:AT1G20620
uniprot id: A0A1P8AWT7
uniprot id: A0A5S9VCL0
uniprot id: B9DG18
uniprot id: F4HUL6
uniprot id: Q2V4M4
uniprot id: Q42547
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the catalase family.
messages: Homotetramer and heterotetramer (PubMed:25700484). At least six or seven isozymes are produced from a mixture of 3 gene products. Interacts with NCA1 (PubMed:25700484). Interacts with LSD1 (PubMed:23958864).
messages: Induced by cadmium.
messages: Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
messages: Peroxisome

3702:AT5G23470
gene id: 3702:AT5G23470
uniprot id: Q9FHL1
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: This promotes the activity of RNA polymerase II.

3702:AT4G15260
gene id: 3702:AT4G15260
uniprot id: Q8GYB0
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT4G09760
gene id: 3702:AT4G09760
uniprot id: Q9SZ92
names: Function
names: Induction
names: Similarity
messages: Belongs to the choline/ethanolamine kinase family.
messages: By wounding, and salt and osmotic stresses.
messages: Involved in phospholipid biosynthesis. Catalyzes the first step in phosphatidylcholine biosynthesis (By similarity).

3702:AT2G29970
gene id: 3702:AT2G29970
uniprot id: O80875
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ClpA/ClpB family.
messages: Contains 1 EAR motif required for the interaction with TPR2.
messages: Expressed in axillary branches and roots. Detected in seedlings and leaves (PubMed:23893171). Expressed in the primary rosette buds and expanding leaves of adult rosettes, the vasculature of the hypocotyls, cotyledons, and mature roots, and in the midvein and petioles of young leaves (PubMed:26546447).
messages: Interacts with TPL/TPR in an EAR-motif dependent manner (PubMed:26546447). Interacts with TPL, TPR1, TPR2 and TPR4 (PubMed:26546447). Interacts with MAX2 and TPR2 (PubMed:26546446). Interacts with D14 (PubMed:26546446, PubMed:25713176). The interaction with D14 occurs in the presence of (2'R) stereoisomers of strigolactones, but not (2'S) stereoisomers (PubMed:25713176).
messages: No visible phenotype. Suppresses max2 phenotypes associated with strigolactone-D14-regulated growth. Smxl7 and max2 double mutants have reduced branching and increased inflorescence heights compared with max2 mutants.
messages: Nucleus
messages: Probable component of a transcriptional corepressor complex involved in branching control. Regulates cotyledon expansion and lateral root growth, but not germination or hypocotyl elongation. Promotes auxin transport and PIN1 accumulation in the stem and represses BRC1/TCP18 expression in axillary buds (PubMed:26546447, PubMed:26546446).
messages: Ubiquitinated upon strigolactone treatment. Strigolactone, but not karrikin, triggers rapid SCF(MAX2)-dependent degradation (PubMed:26546447, PubMed:26546446).
messages: Up-regulated by strigolactone treatment.

3702:AT4G31210
gene id: 3702:AT4G31210
uniprot id: A0A1P8B5I9
uniprot id: A0A1P8B5K1
uniprot id: A0A5S9XY88
uniprot id: F4JRX3
names: Similarity
messages: Belongs to the type IA topoisomerase family.

3702:AT1G32880
gene id: 3702:AT1G32880
uniprot id: F4HPE4
names: Similarity
messages: Belongs to the importin alpha family.

3702:AT2G16225
gene id: 3702:AT2G16225
uniprot id: A0A654ETA3
uniprot id: A8MQP7
names: Similarity
names: Tissue Specificity
messages: Belongs to the MEG family.
messages: Expressed in leaves and flowers.

3702:AT2G44800
gene id: 3702:AT2G44800
uniprot id: A0A178VQU2
uniprot id: F4IV21
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT1G51480
gene id: 3702:AT1G51480
uniprot id: Q9C8K0
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT1G02090
gene id: 3702:AT1G02090
uniprot id: A0A178W6J6
uniprot id: A0A178W722
uniprot id: F4HVW0
uniprot id: Q94JU3
names: Caution
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CSN7/EIF3M family. CSN7 subfamily.
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of IAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Regulates the TSO2 subcellular localization. May be involved in nucleic acid binding.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8. In the CSN complex, it probably interacts directly with CSN4. Interacts (via PCI domain) with CSN1 (via PCI domain) and CSN8 (via PCI domain), and (via C-terminal tail) with CSN6A, TSO2 and RNR2A. Cannot interact simultaneously with CSN1 and CSN8 to form ternary complexes. Also exists as a monomeric form. Binds to the translation initiation factors TIF3E1 and TIF3H1 (PubMed:15548739, PubMed:19704582).
messages: Cytoplasm
messages: Nucleus
messages: Phosphorylated.
messages: The PCI domain is not sufficient to efficiently mediate CSN complex assembly and for biological activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G26910
gene id: 3702:AT1G26910
uniprot id: A0A1P8AUU3
uniprot id: A0A384KKM3
uniprot id: Q08770
uniprot id: Q2HIH6
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S) (By similarity).

3702:AT4G31060
gene id: 3702:AT4G31060
uniprot id: A0A384LCY2
uniprot id: C0SVK9
uniprot id: Q6NLD5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G39720
gene id: 3702:AT5G39720
uniprot id: A0A1P8BBU1
uniprot id: A0A654G6E7
uniprot id: A2RVP6
uniprot id: Q9FIX2
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the gamma-glutamylcyclotransferase family.
messages: Expressed at the end of flowering and during seed maturation.
messages: Expressed only in seeds.
messages: Not regulated by chemical or biotic treatments.
messages: Putative gamma-glutamylcyclotransferase.

3702:AT2G47760
gene id: 3702:AT2G47760
uniprot id: A0A1P8AZV0
uniprot id: A0A2H1ZE55
uniprot id: O82244
uniprot id: W8Q394
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 58 family.
messages: Endoplasmic reticulum membrane
messages: In the absence of ALG3 activity, the N-glycans transferred to proteins are aberrant, indicating that the oligosaccharyltransferase (OST) complex is substrate-tolerant.
messages: Membrane
messages: No obvious phenotype under normal and high temperature or salt/osmotic stress conditions.
messages: Required for N-linked oligosaccharide assembly. Adds the sixth mannose residue in an alpha-1,3 linkage onto the dolichol-PP-oligosaccharide precursor dolichol-PP-Man(5)GlcNAc(2).

3702:AT3G51390
gene id: 3702:AT3G51390
uniprot id: A0A178VFJ8
uniprot id: A0A1I9LQT3
uniprot id: Q7XA86
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Expressed in mature embryos, embryo sacs, cotyledons, whole seedlings, hydathodes, guard cells, sites of lateral root initiation, root tips and phloem, but not in xylem.
messages: Expressed in tapetal layer of developing anthers and then expression gradually increases in developing microspores and in mature pollen.
messages: Membrane
messages: Not regulated by salt stresses.
messages: Pleiotropic growth defects, including smaller leaves, dwarfism, and sterility. Hypersensitivity to salt stress and compromised pollen tube growth.
messages: S-acyltransferase involved in protein lipid modification. Catalyzes the palmitoylation of proteins peripheral or integral to the tonoplast. Required for the tonoplast localization of CBL2, CBL3 and CBL6, but not for the plasma membrane localization of CBL9, for the endosome localization of RABF1 or for the endomembrane localization of RABF2B.
messages: The DHHC domain is required for palmitoyltransferase activity.
messages: Vacuole membrane

3702:AT2G45695
gene id: 3702:AT2G45695
uniprot id: A0A178VS32
uniprot id: A0MDQ1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
messages: Belongs to the URM1 family.
messages: C-terminal thiocarboxylation occurs in 2 steps, it is first acyl-adenylated (-COAMP) via the hesA/moeB/thiF part of the MOCS3 homolog, then thiocarboxylated (-COSH) via the rhodanese domain of the MOCS3 homolog.
messages: C-terminal thiocarboxylation occurs in 2 steps, it is first acyl-adenylated (-COAMP) via the hesA/moeB/thiF part of the MOCS3/UBA4 homolog, then thiocarboxylated (-COSH) via the rhodanese domain of the MOCS3/UBA4 homolog.
messages: Cytoplasm

3702:AT5G11130
gene id: 3702:AT5G11130
uniprot id: A0A178U6C6
uniprot id: Q9LFP3
uniprot id: W8PUF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: May be involved in cell wall biosynthesis.
messages: Membrane

3702:AT4G27370
gene id: 3702:AT4G27370
uniprot id: A0A1P8B4A4
uniprot id: A0A1P8B4C4
uniprot id: F4JIU4
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class VIII subfamily.
messages: Homodimer.
messages: IQ domain mediates interaction with calmodulin.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity).

3702:AT1G14480
gene id: 3702:AT1G14480
uniprot id: F4HW68
uniprot id: Q9M9R5
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G17490
gene id: 3702:AT5G17490
uniprot id: Q9LF53
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRAS family. DELLA subfamily.
messages: Expressed at very low level. Mainly expressed in germinating seeds and flowers and siliques. Not expressed in other tissues.
messages: Interacts directly with the GID2/SLY1 component of the SCF(GID2) complex, suggesting that it may be ubiquitinated. Interacts (via N-terminus) with GID1A, GID1B and GID1B (via N-terminus). Interacts with the BOI proteins BOI, BRG1, BRG2 and BRG3.
messages: May be ubiquitinated.
messages: Nucleus
messages: Phosphorylated.
messages: Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. No effect of the BOI proteins on its stability. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Its activity may be regulated by phytohormones such as auxin and ethylene (By similarity).
messages: Rga, gai, rgl1, rgl2 and rgl3 pentuple mutant displays constitutive GA responses even in the absence of GA treatment.

3702:AT1G26600
gene id: 3702:AT1G26600
uniprot id: A0A178WMR4
uniprot id: A0A1P8AX22
uniprot id: Q9FZE4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed in leaves, flowers, stems and apex, and, to a lower extent, in seedlings, roots, siliques and pollen.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-115 enhances binding affinity of the CLE9p peptide for its receptor.
messages: extracellular space

3702:AT1G29790
gene id: 3702:AT1G29790
uniprot id: Q8RWB7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane

3702:AT3G18650
gene id: 3702:AT3G18650
uniprot id: Q9LSB2
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with MEE14/CBP1.
messages: Nucleus
messages: Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction.

3702:AT5G48070
gene id: 3702:AT5G48070
uniprot id: Q9FI31
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) (By similarity). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (PubMed:23585673). Involved in cell proliferation in the tissue reunion process of wounded inflorescence stems. Maybe a downstream target of NAC071 as a consequence of auxin action in wounded stems (PubMed:25182467).
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Root specific.
messages: apoplast
messages: cell wall

3702:AT5G18870
gene id: 3702:AT5G18870
uniprot id: F4JZJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the IUNH family.
messages: May be involved in the degradation of extracellular nucleosides.
messages: apoplast

3702:AT2G20840
gene id: 3702:AT2G20840
uniprot id: A0A1P8AXH0
uniprot id: A0A5S9WZY0
uniprot id: Q9SKT3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SCAMP family.
messages: Cell membrane
messages: Membrane
messages: Probably involved in membrane trafficking.
messages: secretory vesicle membrane

3702:AT2G22000
gene id: 3702:AT2G22000
uniprot id: A0A654EV09
uniprot id: Q9SIZ9
names: Function
names: Similarity
messages: Belongs to the brassicaceae elicitor peptide family.
messages: Elicitor of plant defense.

3702:AT1G08280
gene id: 3702:AT1G08280
uniprot id: A0A178WDI2
uniprot id: Q9SGD2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycosyltransferase 29 family.
messages: Galactosyltransferase involved in the biosynthesis of type II arabinogalactan. Possesses galactosyltransferase (GalT) activity in vitro, transferring galactose from UDP-galactose to a mixture of various oligosaccharides derived from arabinogalactan proteins. Forms a complex with GALT31A that can work cooperatively to enhance the activities of adding galactose residues at O6 positions to beta-1,6-galactan and beta-1,3-galactan.
messages: Golgi apparatus membrane
messages: Interacts with GALT31A.
messages: Membrane

3702:ArthCp027
gene id: 3702:ArthCp027
uniprot id: A0A1B1W4V1
uniprot id: P56751
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Mitochondrion membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3702:AT3G20010
gene id: 3702:AT3G20010
uniprot id: A0A1I9LTA5
uniprot id: A0A1I9LTA6
uniprot id: A0A1I9LTA7
uniprot id: Q9LHE4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
messages: Interacts with SUVR2 (PubMed:25420628, PubMed:25425661). Interacts with itself (PubMed:25420628).
messages: Nucleus
messages: Probable helicase-like transcription factor involved in transcriptional gene silencing. Associates with SUVR2 and contributes to transcriptional gene silencing at RNA-directed DNA methylation (RdDM) target loci but also at RdDM-independent target loci. May be involved in nucleosome positioning to form ordered nucleosome arrays on chromatin (PubMed:25420628). Associates with SUVR2 and functions redundantly with FRG2. Required for the efficient methylation of a broad range of RdDM target loci (PubMed:25425661).

3702:AT4G34460
gene id: 3702:AT4G34460
uniprot id: A0A178V0Y1
uniprot id: A8MR96
uniprot id: F4JLD1
uniprot id: F4JLD2
uniprot id: P49177
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: An article reported a role as negative regulator of ABA during seed germination; however, this paper was later retracted.
messages: Belongs to the WD repeat G protein beta family.
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in seedlings (especially at the hypocotyl/root junction), roots, leaves (restricted to veins and guard cells), and flowers (PubMed:17468261, PubMed:18441222). Also present in hydathods (PubMed:17468261). Expressed in guard cells, mesophyll tissue of cotyledons, trichomes and whole siliques, but not in seeds (PubMed:17492287).
messages: G proteins are composed of 3 units, alpha, beta and gamma. Interacts with the gamma subunits GG1 and GG2. The dimers GB1-GG1 and GB1-GG2 interact with NDL1, NDL2 and NDL3. Interacts with WNK8. Interacts with XLG2 (PubMed:11121078, PubMed:11513956, PubMed:17158913, PubMed:17468261, PubMed:19825634, PubMed:19948787, PubMed:22940907). Interacts with RACK1A, RACK1B and RACK1C (PubMed:25731164). Interacts with ZAR1 (via GBeta-binding domain) (PubMed:27014878).
messages: Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. The heterotrimeric G-protein controls defense responses to necrotrophic and vascular fungi probably by modulating cell wall-related genes expression (e.g. lower xylose content in cell walls); involved in resistance to fungal pathogens such as Alternaria brassicicola and Fusarium oxysporum. Modulates root architecture (e.g. lateral root formation). Acts with XGL3 in the positive regulation of root waving and root skewing. Involved in the asymmetric division of zygote and specification of apical and basal cell lineages (PubMed:27014878).
messages: In flowers, mostly expressed in stigma and pollen, and moderately present in sepals and stamen filaments. In siliques, observed at both ends, gradually disappearing toward the center.
messages: Induced locally by Alternaria brassicicola but systemically by Fusarium oxysporum.
messages: Nucleus
messages: Shorter hypocotyls and abnormal roots architecture; more auxin-induced lateral roots. Enhanced susceptibility to necrotrophic and vascular pathogenic fungi, such as Alternaria brassicicola, Plectosphaerella cucumerina and Fusarium oxysporum associated with a disturbed expression of genes involved in cell wall metabolism. Longer and wider primary roots with faster growth. Severely compromised root waving and abnormal root skewing response. Hypersensitivity to ethylene (ACC).
messages: The DWD box is required for interaction with DDB1A.

3702:AT3G09670
gene id: 3702:AT3G09670
uniprot id: Q9SF36
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PDP family.
messages: Delayed flowering associated with reduced H3K27me3 level on FLC (PubMed:29314758). The triple mutant pdp1 pdp2 pdp3 has increased levels of FLC, MAF4 and MAF5 expression, but decreased expression of FT (PubMed:29314758).
messages: Interacts with DEK3 (PubMed:25387881). Binds to MSI4/FVE and MSI5 (PubMed:29314758). Component of the PRC2 (polycomb repressive complex 2) complex which regulates histone methylation on histone H3K27 (By similarity).
messages: Nucleus
messages: Together with PDP1, PDP3 and PDP6, interacts with MSI4/FVE and MSI5 to suppress FLC, MAF4 and MAF5 expression by regulating the function of the PRC2 complex and modulating H3K27me3 level, thereby promoting flowering.

3702:AT1G15360
gene id: 3702:AT1G15360
uniprot id: A0A178WNC4
uniprot id: Q9XI33
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Detected in sepals of very young closed buds. Later, expressed in sepals and petals veins and epidermis, as well as in developing gynoecium but not in stamens. At anthesis, confined to the gynoecium, commenced in the anther, and slightly expressed in the anther filament. When petals and sepals withered, strong expression at the bottom of the silique, in the abscission zone, and in the pedicel region below it. At silique maturity, detected in the same region but only at the nectaries.
messages: Expressed in aerial organs, mostly in flowers, and in roots. Also observed at the branch points of pedicels of most young flowers, and in a patchy pattern in roots of mature plants and very young leaves in the rosette, including support cells of their trichomes.
messages: Nucleus
messages: Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT4G28010
gene id: 3702:AT4G28010
uniprot id: A0A178UVK0
uniprot id: Q9SUD8
names: Caution
names: Similarity
messages: Belongs to the PPR family. P subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G67580
gene id: 3702:AT5G67580
uniprot id: Q9FJW5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H1/H5 family. SMH subfamily.
messages: Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.
messages: Chromosome
messages: Forms a homodimer and heterodimers with TRB1 or TRB3. Interacts with TRB1 and TRB3.
messages: HTH myb-type domain confers double-stranded telomeric DNA-binding while the H15 domain is involved in non-specific DNA-protein interaction and multimerization.
messages: Nucleus
messages: Ubiquitous.
messages: nucleolus

3702:AT1G01410
gene id: 3702:AT1G01410
uniprot id: Q9LNI2
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT1G03870
gene id: 3702:AT1G03870
uniprot id: A0A384LCI6
uniprot id: B3LF88
uniprot id: Q9ZWA8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT3G25420
gene id: 3702:AT3G25420
uniprot id: Q9LSV8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in flowers and siliques.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT5G25590
gene id: 3702:AT5G25590
uniprot id: A0A178UHX9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G38030
gene id: 3702:AT5G38030
uniprot id: Q9LS19
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT5G04045
gene id: 3702:AT5G04045
uniprot id: Q3E715
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Contains 6 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT2G33050
gene id: 3702:AT2G33050
uniprot id: A0A5S9X3F1
uniprot id: O49328
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.

3702:AT2G04930
gene id: 3702:AT2G04930
uniprot id: A0A178VS59
uniprot id: Q9SI33
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: This promotes the activity of RNA polymerase II.

3702:AT1G04880
gene id: 3702:AT1G04880
uniprot id: Q9MAT6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HMGB family.
messages: Binds preferentially DNA with A/T-rich content.
messages: Nucleus

3702:AT5G38560
gene id: 3702:AT5G38560
uniprot id: Q9FFW5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Could be involved in the negative regulation of root growth.
messages: Interacts with KIPK1 and KIPK2 (via its cytosolic domain).
messages: Mostly expressed in seedlings, roots, inflorescence bolts and flower buds.

3702:AT2G02170
gene id: 3702:AT2G02170
uniprot id: A0A1P8B0S4
uniprot id: Q9ZUM1
names: Similarity
messages: Belongs to the remorin family.

3702:AT4G38490
gene id: 3702:AT4G38490
uniprot id: A0A178UYU5
uniprot id: Q940H5
names: Similarity
messages: Belongs to the SecE/SEC61-gamma family.

3702:AT3G05920
gene id: 3702:AT3G05920
uniprot id: Q9SFF7
names: Function
names: Induction
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.
messages: Up-regulated by cadmium.

3702:AT1G34050
gene id: 3702:AT1G34050
uniprot id: Q9FX13
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G71520
gene id: 3702:AT1G71520
uniprot id: A0A5S9WRM0
uniprot id: Q9C9I8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G26700
gene id: 3702:AT2G26700
uniprot id: Q64FQ2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed throughout the embryogenesis in the provascular tissues.
messages: No visible phenotype under normal growth conditions.
messages: Serine/threonine-protein kinase involved in the regulation of auxin signaling. Plays a minor role in the regulation of cellular auxin efflux and cotyledon organogenesis.

3702:AT2G17870
gene id: 3702:AT2G17870
uniprot id: Q94C69
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates during cold acclimation, especially in roots.
messages: Belongs to the cold shock protein (CSP) family.
messages: Chaperone that binds to RNA, single- (ssDNA) and double-stranded (dsDNA) DNA, and unwinds nucleic acid duplex. Promotes freezing tolerance.
messages: Cytoplasm
messages: In flowers, present in pollen within anthers. High expression in the earliest stage of silique development, with a decrease during the middle stages of silique development and subsequently an increase during the later stages.
messages: Interacts with PTAC16, PABN1, PABN2 and PABN3.
messages: Mostly expressed in shoot and root apices, and siliques, and, to a lower extent, in roots, cotyledons, stems, shoots, leaves, floral buds and flowers.
messages: Nucleus
messages: Sensitive to freezing.

3702:AT3G63400
gene id: 3702:AT3G63400
uniprot id: Q9LY75
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Interacts with SNRNP35, RNU1, SCL28, SCL30, SR30 and SR34. The binding to SR34 is phosphorylation-dependent (PubMed:15166240).
messages: Nucleus speckle
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be implicated in the folding, transport, and assembly of proteins. Probably involved in early steps of spliceosomal assembly.
messages: Ubiquitous.
messages: nucleoplasm

3702:AT1G31830
gene id: 3702:AT1G31830
uniprot id: Q9C6S5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Polyamine:cation symporter (PHS) (TC 2.A.3.12) family.
messages: Cell membrane
messages: Probable cell membrane polyamine/proton symporter involved in the polyamine uptake in cells.

3702:AT4G30067
gene id: 3702:AT4G30067
uniprot id: A0A5S9XXI7
uniprot id: P82777
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G14940
gene id: 3702:AT5G14940
uniprot id: A0A654G158
uniprot id: Q9LFR1
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Down-regulated upon nematode infection.
messages: Expressed in shoots, roots, stems, leaves and flowers.
messages: Membrane

3702:AT1G56500
gene id: 3702:AT1G56500
uniprot id: Q8VZ10
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: High light intensity-dependent and irreversible nonphotochemical quenching (NPQ) due to a decrease in chlorophyll excited-state lifetime.
messages: In the C-terminal section; belongs to the thioredoxin family.
messages: In the N-terminal section; belongs to the HAD-like hydrolase superfamily.
messages: Required to maintain light harvesting efficiency, especially during nonphotochemical quenching (NPQ) recovery, via the regulation of chlorophyll excited-state lifetime probably by preventing the formation of a slowly reversible form of antenna quenching.
messages: chloroplast thylakoid membrane

3702:AT4G34230
gene id: 3702:AT4G34230
uniprot id: A0A178V3B0
uniprot id: F4JKM2
uniprot id: O49482
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed at the lateral root initiation sites, in the vascular tissues of the primary lateral root and the root caps. Expressed in the hypocotyl, cotyledon and leaf veins, apical meristem region, at the base of the trichomes, hydathodes and cauline leaves. In stems, expressed in the cells associated with the vascular cambium, interfascicular cambium and the developing xylem. Expressed in the vascular strand of petals and sepals, anthers, stamen filaments, stigma in flowers, and abscission, style and stigmatic regions of siliques.
messages: Homodimer.
messages: Involved in lignin biosynthesis in the floral stem. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.
messages: Reduced lignin content and rigidity of the floral stems.

3702:AT1G25460
gene id: 3702:AT1G25460
uniprot id: A0A178W577
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G07550
gene id: 3702:AT1G07550
uniprot id: C0LGD8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G17280
gene id: 3702:AT1G17280
uniprot id: Q9SHI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Membrane

3702:AT5G48595
gene id: 3702:AT5G48595
uniprot id: Q2V305
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G69740
gene id: 3702:AT1G69740
uniprot id: A0A178WCT0
uniprot id: Q9SFH9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ALAD family.
messages: Binds 2 magnesium ions per monomer. The first magnesium ion is required for catalysis. The second functions as allosteric activator.
messages: Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity).
messages: Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.
messages: Embryo lethal when homozygous. Impaired plant growth and development.
messages: Highly expressed in cotyledons during dark-to-light transition.
messages: Homooctamer.
messages: Up-regulated by the transcription factors FAR1 and FHY3.
messages: chloroplast

3702:AT3G26690
gene id: 3702:AT3G26690
uniprot id: Q52K88
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: Inhibited by fluoride.
messages: Mediates the hydrolysis of some nucleoside diphosphate derivatives. Can use diadenosine 5',5'''-P(1)P(6) hexaphosphate (Ap(6)A), diadenosine 5',5'''-P(1)P(5) pentaphosphate (Ap(5)A) and adenosine tetraphosphate (p(4)A) as substrates, but not diadenosine 5',5'''-P(1)P(4) tetraphosphate (Ap(4)A), diadenosine 5',5'''-P(1)P(3) triphosphate (Ap(3)A), deoxyribonucleoside triphosphates, ribonucleoside triphosphates, diphosphoinositol pentakisphosphate (PP-InsP(5)) and 5-phospho-alpha-D-ribosyl diphosphate (PRPP).
messages: Mitochondrion
messages: Monomer.
messages: No visible phenotype under normal growth conditions.

3702:AT4G05340
gene id: 3702:AT4G05340
uniprot id: A0A178V3C3
uniprot id: Q9M0W1
names: Similarity
messages: Belongs to the AAA ATPase family.

3702:AT1G16330
gene id: 3702:AT1G16330
uniprot id: A0A178W969
uniprot id: Q9SA32
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.

3702:AT5G63110
gene id: 3702:AT5G63110
uniprot id: A0A384KCB8
uniprot id: B1PXB9
uniprot id: Q9FML2
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone deacetylase family. HD Type 1 subfamily.
messages: Belongs to the histone deacetylase family. HD type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: By jasmonic acid and ethylene.
messages: Curling and serrated leaves. Down curling phenotype on both the distal and lateral axis.
messages: HDA6 mutations induce high acetylation of histone H4, increased methylation of histone H3 'Lys-4' and hypomethylation of DNA at particular loci, such as the rDNA repeats.
messages: Inhibited by trichostatin A.
messages: Interacts with Coi1, which functions in an SCF complex that recruits regulators for ubiquitination (PubMed:12445118). Interacts with AHL22 (PubMed:12445118, PubMed:22442143). Interacts with AS1 (PubMed:23271976). Part of the AS1 repressor complex composed of AS1, LBD6/AS2 and HDA6 (PubMed:23271976). Binds to EBS and SHL (PubMed:25281686). Interacts with MBD6 (PubMed:28229965). Interacts with HDA5 (PubMed:25922987). Interacts with FLD (PubMed:21398257).
messages: Not detected in leaves, stems, flowers and young siliques.
messages: Nucleus
messages: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Might remove acetyl residues only from specific targets, such as rDNA repeats or complex transgenes. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Required for rRNA gene silencing in nucleolar dominance. Plays a role in transgene silencing, but this effect seems to bee independent of the histone deacetylase activity (PubMed:11340181, PubMed:12486004, PubMed:15037732, PubMed:16648464). Part of the AS1 repressor complex to regulate the KNOX expression in leaf development (PubMed:23271976). Binds to KNAT1, KNAT2, and KNATM chromatin (PubMed:23271976). Involved in the regulation of flowering time (PubMed:21398257, PubMed:25922987). Forms a histone deacetylase complex with HDA5, FLD and MSI4/FVE that represses FLC gene expression to control flowering time (PubMed:21398257, PubMed:25922987).
messages: nucleolus

3702:AT5G20870
gene id: 3702:AT5G20870
uniprot id: A0A178UI45
uniprot id: F4K6W1
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT1G43170
gene id: 3702:AT1G43170
uniprot id: A0A178WDT7
uniprot id: A8MQQ1
uniprot id: P17094
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uL3 family.
messages: Cytoplasm

3702:AT3G07630
gene id: 3702:AT3G07630
uniprot id: Q9SSE7
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine (PubMed:17726025). Dehydratase that uses arogenate and prephenate as substrates (PubMed:17726025). Utilzes more efficiently arogenate than prephenate (PubMed:17726025). Required for chloroplast division prior to ARC5, but in an ARC3- and ARC6-dependent manner, especially involved in the Z-ring formation (PubMed:30252596).
messages: Expressed in roots, leaves, stems, flowers and siliques. Most abundant in leaves and seeds.
messages: Large and misshapen chloroplasts with distorted and irregular outlines.
messages: chloroplast stroma

3702:AT1G26850
gene id: 3702:AT1G26850
uniprot id: A0A178W7C5
uniprot id: B9DFI7
uniprot id: F4HPE1
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Co-expressed with the galacturonosyltransferases GAUT1 and GAUT9.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT4G37420
gene id: 3702:AT4G37420
uniprot id: Q9SZU2
names: Similarity
messages: Belongs to the glycosyltransferase 92 family.

3702:AT2G02580
gene id: 3702:AT2G02580
uniprot id: O64718
uniprot id: Q5E922
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT1G30740
gene id: 3702:AT1G30740
uniprot id: A0A1P8ATP1
uniprot id: A0A5S9WI05
uniprot id: Q9SA89
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT3G07790
gene id: 3702:AT3G07790
uniprot id: A0A384L8Q6
uniprot id: Q9S7V6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ESS2 family.
messages: Nucleus

3702:AT5G56100
gene id: 3702:AT5G56100
uniprot id: A0A178UG17
uniprot id: Q9FKT7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oleosin family.
messages: Lipid droplet

3702:AT1G29030
gene id: 3702:AT1G29030
uniprot id: A0A1P8AUI7
uniprot id: Q8GXH2
names: Similarity
messages: Belongs to the API5 family.

3702:AT4G10500
gene id: 3702:AT4G10500
uniprot id: Q9ZSA8
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: (Microbial infection) Confers susceptibility to the downy mildew pathogen Hyaloperonospora arabidopsidis.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Converts salicylic acid (SA) to both 2,3-dihydroxybenzoic acid (2,3-DHBA) and 2,5-DHBA in vitro but only 2,3-DHBA in vivo. Component of a negative feedback regulation system of SA levels during senescence. Regulates both onset and progression of leaf senescence (PubMed:23959884). Negative regulator of defense against Hyaloperonospora arabidopsidis (PubMed:25376907).
messages: Impaired production of 2,3-DHBA sugar conjugates but accumulation of salicylic acid (SA) and its sugar conjugates. Precocious senescence. Enhanced expression of senescence-associated and defense-related genes.
messages: Induced by the powdery mildew pathogen Erysiphe cichoracearum (PubMed:12920300). Accumulates upon infection with the downy mildew Hyaloperonospora arabidopsidis, the powdery mildew Erysiphe orontii, and the bacterium Pseudomonas syringae. Present only in or around the main veins of cotyledons and leaves infected by H. arabidopsidis (PubMed:25376907). Induced by salicylic acid (SA) (PubMed:23959884, PubMed:25376907). Accumulates in senescing leaves (PubMed:23959884).

3702:AT1G30080
gene id: 3702:AT1G30080
uniprot id: A0A1P8ANI0
uniprot id: F4I4R0
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT4G35620
gene id: 3702:AT4G35620
uniprot id: A0A1P8B7U0
uniprot id: A0A654FVS9
uniprot id: Q39070
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Expressed in roots.
messages: Interacts with CDC20-1 and CDC20-2.

3702:AT1G58460
gene id: 3702:AT1G58460
uniprot id: A0A1P8ASK7
uniprot id: B6IDH8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SOFL plant protein family.
messages: Cytoplasm
messages: Domains SOFL-A and SOFL-B are required for function in cytokinin-mediated development.
messages: Expressed in seedlings, flowers and siliques (PubMed:29467189). Barely detectable in roots and leaves (PubMed:29467189).
messages: Involved in cytokinin-mediated development.
messages: Nucleus

3702:AT5G61990
gene id: 3702:AT5G61990
uniprot id: Q9FIT7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G16160
gene id: 3702:AT3G16160
uniprot id: Q700D0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the lin-54 family.
messages: Nucleus
messages: Plays a role in development of both male and female reproductive tissues.
messages: The cysteine-rich domain CRC binds zinc in vitro.

3702:AT2G30250
gene id: 3702:AT2G30250
uniprot id: A0A654EYX0
uniprot id: O22921
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WRKY group I family.
messages: By salt stress (PubMed:18839316). Induced by heat stress (PubMed:19125253).
messages: Highly expressed in roots and at lower levels in leaves, stems and seeds.
messages: Interacts with MKS1 (PubMed:15990873). Interacts with SIB1 (PubMed:21990940). Interacts with VQ10 and CAMBP25/VQ15 (PubMed:22535423).
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Phosphorylated by MPK4.
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Functions with WRKY33 as positive regulator of salt stress response and abscisic acid (ABA) signaling (PubMed:18839316). Plays a partial role in heat stress tolerance (PubMed:19125253). Functions with WRKY26 and WRKY33 as positive regulator of plant thermotolerance by partially participating in ethylene-response signal transduction pathway (PubMed:21336597).

3702:AT4G01500
gene id: 3702:AT4G01500
uniprot id: O82595
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Regulates lateral organ growth. Functionally redundant with NGA1, NGA2 and NGA3.

3702:AT3G26920
gene id: 3702:AT3G26920
uniprot id: Q9LJF9
names: Sequence Caution
messages: Sequencing errors.

3702:AT4G33770
gene id: 3702:AT4G33770
uniprot id: A0A178V2A8
uniprot id: A0A384KFJ1
uniprot id: A8MRH2
uniprot id: O81893
names: Caution
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ITPK1 family.
messages: Binds 2 magnesium ions per subunit.
messages: Distorted seed coat with reduced mucilage content and decreased suberin and cutin composition. Crumpled columellas.
messages: Expressed in seedling roots, cotyledons, rosette leaves, cauline leaves, stems, flowers, siliques and seeds.
messages: Expressed in the seed coat of developing seeds from 2 to 6 days after fertilization.
messages: Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3.
messages: Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. Phosphorylates Ins(3,4,5,6)P4 to form InsP5 (PubMed:17698066). This reaction is thought to have regulatory importance, since Ins(3,4,5,6)P4 is an inhibitor of plasma membrane Ca(2+)-activated Cl(-) channels, while Ins(1,3,4,5,6)P5 is not (By similarity). Also phosphorylates Ins(1,3,4)P3 or a racemic mixture of Ins(1,4,6)P3 and Ins(3,4,6)P3 to form InsP4 (PubMed:17698066). Ins(1,3,4,6)P4 is an essential molecule in the hexakisphosphate (InsP6) pathway (By similarity). Plays a role in seed coat development and lipid polyester barrier formation (PubMed:23595027).
messages: Monomer.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G54970
gene id: 3702:AT1G54970
uniprot id: Q9FZ35
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant proline-rich protein superfamily. ENOD12 family.
messages: Exclusively expressed in roots, especially in root hairs.
messages: May contribute to cell wall structure in root hairs.
messages: cell wall

3702:AT4G02720
gene id: 3702:AT4G02720
uniprot id: Q8S9I4
names: Similarity
messages: Belongs to the NKAP family.

3702:AT5G25180
gene id: 3702:AT5G25180
uniprot id: A0A654G407
uniprot id: P58051
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT5G08030
gene id: 3702:AT5G08030
uniprot id: Q9SD81
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycerophosphoryl diester phosphodiesterase family.
messages: By phosphate starvation.
messages: Expressed in flowers and siliques.

3702:AT2G21280
gene id: 3702:AT2G21280
uniprot id: Q9SJU9
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Can form homodimers.
messages: Expressed in leaves, stems and flower buds.
messages: Plants silencing GC1 show greatly enlarged chloroplasts containing densely packed thylakoid membranes in mesophyll cells and leaves with decreased rates of CO(2) assimilation.
messages: Putative NADP-dependent oxidoreductase that acts as positive regulator of chloroplast division. May play a role at an early stage of the division process.
messages: chloroplast
messages: chloroplast inner membrane

3702:AT2G17440
gene id: 3702:AT2G17440
uniprot id: Q5G5E0
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the SHOC2 family.
messages: Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.
messages: Widely expressed but preferentially in roots.

3702:AT3G15410
gene id: 3702:AT3G15410
uniprot id: A0A384LB20
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G22170
gene id: 3702:AT2G22170
uniprot id: A0A654EWM5
uniprot id: Q9SIE7
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Down-regulated by salt stress.
messages: Endoplasmic reticulum
messages: Involved in response to abiotic stress.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: No visible phenotype under normal growth conditions.

3702:AT1G54445
gene id: 3702:AT1G54445
uniprot id: Q2V4G9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G12030
gene id: 3702:AT1G12030
uniprot id: A0A178WFB9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G06830
gene id: 3702:AT5G06830
uniprot id: Q9FG23
names: Function
names: Similarity
messages: Belongs to the CDK5RAP3 family.
messages: Potential regulator of CDK5 activity.

3702:AT2G02870
gene id: 3702:AT2G02870
uniprot id: Q8L736
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:ArthCp071
gene id: 3702:ArthCp071
uniprot id: A0A1B1W4Y7
uniprot id: P56752
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 5 family.
messages: Membrane
messages: NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: chloroplast thylakoid membrane

3702:AT1G03930
gene id: 3702:AT1G03930
uniprot id: A0A178WAQ8
uniprot id: Q9ZWB3
names: Caution
names: Function
names: PTM
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated on serine, threonine and tyrosine residues.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CK1 Ser/Thr protein kinase family. Casein kinase I subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate casein on serine and threonine residues, and poly(Glu,Tyr) in vitro.
messages: Cytoplasm
messages: Expressed in leaves, stems and flowers.
messages: Monomer.
messages: Nucleus
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G09470
gene id: 3702:AT3G09470
uniprot id: A0A178V887
uniprot id: Q94AA1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the unc-93 family.
messages: Membrane

3702:AT3G18200
gene id: 3702:AT3G18200
uniprot id: Q9LV20
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT3G19420
gene id: 3702:AT3G19420
uniprot id: A0A178V9M6
uniprot id: Q9LT75
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Accumulates in response to salt (e.g. NaCl) and osmotic stresses (e.g. mannitol).
messages: Belongs to the PTEN phosphatase protein family.
messages: Binds phosphatidic acid. Protein tyrosine phosphatase that exhibits also lipid phosphatase activity. Hydrolyzed poorly p-nitrophenyl phosphate (p-NPP). Can use PtdIns isomers as substrates. Removes efficiently phosphate from the D3 position of the inositol ring, less from the D4 position and not at all from the D5 position on monophosphorylated PtdIns isomers (PIPs). The presence of a phosphate group in the D5 position on PIP(2) isomers reduces lipid phosphatase activity. Mostly active on PtdIns(3)P and PtdIns(3,4)P(2), to a lower extent, on PtdIns(4)P and PtdIns(3,5)P(2), but barely against PtdIns(3,4,5)P(3) as substrate.
messages: Expressed in seedlings, roots, stems, leaves, flowers and siliques. However, at protein level, not observed in older leaves and mature siliques.

3702:AT3G26670
gene id: 3702:AT3G26670
uniprot id: A0A178VAV3
uniprot id: Q8RWF4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity).
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).
messages: Belongs to the NIPA (TC 2.A.7) family.
messages: Cell membrane
messages: Early endosome
messages: Endosome
messages: Homodimer.
messages: Membrane

3702:AT2G32200
gene id: 3702:AT2G32200
uniprot id: A0A178VV61
uniprot id: A0A1P8AXU8
uniprot id: Q1PEX8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: Cell membrane
messages: Heterodimers (PubMed:29272523). Interacts with CYSTM7 and WIH1/CYSTM13 (PubMed:29272523).
messages: Induced by heat in roots, but suppressed in shoots (PubMed:29272523). Accumulates in response to cold, drought, oxidation stress and salt (PubMed:29272523).
messages: Involved in resistance to abiotic stress.
messages: Membrane
messages: Mostly expressed in roots, stems, rosette leaves and siliques and, to a lower extent, in flowers and cauline leaves.
messages: Nucleus

3702:AT2G05320
gene id: 3702:AT2G05320
uniprot id: Q9FT88
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 16 (GT16) protein family.
messages: Catalyzes an essential step in the conversion of oligo-mannose and hybrid to complex N-glycans.
messages: Golgi apparatus membrane

3702:AT3G50330
gene id: 3702:AT3G50330
uniprot id: A0A178VGG7
uniprot id: Q9SND4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the developing septum, transmitting tract and stigma.
messages: Gynoecium.
messages: Homodimer (Probable). Interacts with SPT.
messages: Impaired pollen tube growth.
messages: Negatively regulated by ARF3/ETT in the abaxial gynoecium.
messages: Nucleus
messages: Required for the female reproductive tract development and fertility.

3702:AT2G12465
gene id: 3702:AT2G12465
uniprot id: P82765
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G13590
gene id: 3702:AT1G13590
uniprot id: Q9LMY9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phytosulfokine family.
messages: Expressed only in roots.
messages: PSK-beta is produced from PSK-alpha by exopeptidase digestion.
messages: Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
messages: Secreted
messages: Sulfation is important for activity and for the binding to a putative membrane receptor.

3702:AT5G11820
gene id: 3702:AT5G11820
uniprot id: A0A654G0B5
uniprot id: F4JXZ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G28750
gene id: 3702:AT4G28750
uniprot id: A0A178V4E9
uniprot id: Q9S831
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 2 isoforms may exist. With or without the N-terminal alanine (By similarity).
messages: Belongs to the PsaE family.
messages: Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase.
messages: chloroplast thylakoid membrane

3702:AT4G02630
gene id: 3702:AT4G02630
uniprot id: A0A178UZ74
uniprot id: O22764
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G39280
gene id: 3702:AT5G39280
uniprot id: Q9FL79
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Membrane
messages: cell wall

3702:AT5G03540
gene id: 3702:AT5G03540
uniprot id: A0A178UQT1
uniprot id: B3H609
uniprot id: F4KGM7
uniprot id: Q9LZD3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EXO70 family.
messages: Cell membrane
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall. Participates in polarized pectin delivery required for the polarized development of the mucilage-producing volcano cells of the seed coat. Involved in the recycling and localization of auxin efflux carriers PIN1 and PIN2, and thus in polar auxin transport regulation. Functions in vesicle trafficking in tracheary elements to regulate patterned secondary cell wall (SCW) thickening (PubMed:27801942).
messages: Component of the exocyst complex.
messages: Dwarf and sterile plants with decreased apical dominance. Branched inflorescences due to ectopic initiation of lateral inflorescences instead of flowers. Altered polar growth of root hairs and stigmatic papillae. Reduced cell expansion and aberrant xylem development. Aberrant deposition of xylem secondary cell wall (SCW) (PubMed:27801942).
messages: The exocyst complex is composed of SEC3, SEC5, SEC6, SEC8, SEC10, EXO70A1 and EXO84B. Interacts with SEC3A and EXO84B. Co-localizes with FPP3/VETH1, FPP2/VETH2 and COG2 in vesicle-like small motile compartments (PubMed:25541219). May interact with COG2 (PubMed:27801942).
messages: cell wall
messages: cytosol
messages: phragmoplast

3702:AT1G72450
gene id: 3702:AT1G72450
uniprot id: A0A178W2J3
uniprot id: A0A1P8ARP3
uniprot id: Q9C9E3
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Acetylated by Pseudomonas syringae HopZ1a.
messages: (Microbial infection) Interacts with the pathogenic Pseudomonas syringae HopZ1a protein.
messages: (Microbial infection) Triggered to degradation by the pathogenic Pseudomonas syringae HopZ1a protein in a COI1-dependent manner, thereby activating host jasmonate signaling.
messages: Belongs to the TIFY/JAZ family.
messages: Cell membrane
messages: Homo- and heterodimer. Interacts with MYC2, AFPH2/NINJA, TIFY10A/JAZ1, TIFY10B/JAZ2, TIFY11A/JAZ5, TIFY5A/JAZ8, TIFY9/JAZ10 and TIFY3B/JAZ12.
messages: Nucleus
messages: Repressor of jasmonate responses.
messages: The jas domain (186-210) is required for interaction with COI1 and Pseudomonas syringae HopZ1a.
messages: The jas domain is required for interaction with COI1.
messages: Ubiquitinated. Targeted for degradation by the SCF(COI1) E3 ubiquitin ligase-proteasome pathway during jasmonate signaling.
messages: Up-regulated by jasmonate, wounding and herbivory.

3702:AT2G32250
gene id: 3702:AT2G32250
uniprot id: A0A1P8B0H6
uniprot id: A0A1P8B0I3
uniprot id: A0A1P8B0K4
uniprot id: Q3EBQ3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT4G01420
gene id: 3702:AT4G01420
uniprot id: A0A178UXP4
uniprot id: A0A384KKX9
uniprot id: Q7FZF1
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
messages: Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner. May function as a positive regulator of salt or drought responses.
messages: Belongs to the calcineurin regulatory subunit family.
messages: Both N-myristoylation and calcium-mediated conformational changes are essential for its function.
messages: Cytoplasm
messages: Expressed in green tissues, but not in the roots.
messages: Homodimer (By similarity). Interacts with PP2CA, CIPK2, CIPK11, CIPK23 and CIPK24.
messages: Homodimer. Interacts with CIPK.
messages: Membrane
messages: Nucleus
messages: The N-terminal 12 amino acids are sufficient for cell membrane targeting of a heterologous protein.

3702:AT4G35530
gene id: 3702:AT4G35530
uniprot id: A0A654FVV8
uniprot id: Q8VY53
names: Similarity
messages: Belongs to the PIGH family.

3702:AT1G16970
gene id: 3702:AT1G16970
uniprot id: A0A178WAS1
uniprot id: Q9FQ08
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ku70 family.
messages: Cytoplasm
messages: Expressed ubiquitously.
messages: Heterodimer with KU80. Interacts with TRP1. Interacts with WEX. Interacts with OFP1.
messages: No visible phenotype when grown under normal conditions. Hypersensitivity to ionising radiation (IR) and to methylmethane sulfonate (MMS). Longer telomeres.
messages: Nucleus
messages: Single-stranded DNA-dependent ATP-dependent helicase. Involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair. When associated with KU80, binds to double-stranded telomeric and non-telomeric DNA sequences, but not to single-stranded DNA. Plays a role in maintaining telomere length. Acts as a negative regulator of telomerase. Required for maintenance of the telomeric C-rich strand.
messages: Up-regulated in response to induction of double-strand breaks. Down-regulated by heat shock.

3702:AT5G16310
gene id: 3702:AT5G16310
uniprot id: Q9FFF2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase C12 family.
messages: Cytoplasm
messages: Expressed in leaves, stems, sepals, stamens, petals, roots, hypocotyls and cotyledons.
messages: Heterodimer (PubMed:22951400). Interacts with EER5 (PubMed:19843313, PubMed:22951400). Interacts with UCH2, DSS1(V), DSS1(I), RPN3A, RPN3B, RPN12A, RPN12B, SAC3B, CML20 and NUP1 (PubMed:22951400).
messages: No visible phenotype. Uch1 and uch2 double mutants are less fertile, accumulated less chlorophyll and have slightly fewer and shorter cauline branches.
messages: Nucleus
messages: UCH1 and UCH2 are not integral polypeptides of the 26S proteasome, unlike their S.pombe and animal orthologs (PubMed:17559514). However, they interact with the 26S proteasome lid complex as well as to the TREX-2 complex (PubMed:22951400).
messages: Ubiquitin-protein hydrolase involved in the release of ubiquitin attached via both peptide and isopeptide linkages. Able to cleave 'Lys-48'-linked polyubiquitin chains. Involved in the direct or indirect regulation of AUX/IAA proteins stability (Probable). Acts as a linker between the TREX-2 complex and 26S proteasome (PubMed:22951400).

3702:AT4G05420
gene id: 3702:AT4G05420
uniprot id: A0A178UYD4
uniprot id: B3H6I9
uniprot id: Q9M0V3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DDB1 family.
messages: Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes (E2s). Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5, HYH and LAF1. Plays a role in DNA repair by forming with DDB2 the UV-damaged DNA-binding protein complex (UV-DDB). Component of the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protein ligase complex.
messages: Component of the CDD complex, at least composed of COP10, DET1 and DDB1A (PubMed:15342494, PubMed:24563205). Component of the CUL4-RBX1-CDD complex (PubMed:16844902). Component of the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protein ligase complex (PubMed:18223036). Component of the UV-DDB complex, which is composed of DDB1A and DDB2 (PubMed:17409070). Interacts with RAE1 (PubMed:16844902, PubMed:18223036). Interacts with WDR55 (PubMed:22447688). Interacts with ATCSA-1 (PubMed:20128879). Interacts with DDA1 (PubMed:24563205). Binds to ASG2; the subcellular localization of this complex depends on ASG2 farnesylation status (PubMed:26147561). Binds to KTN80.2/DWA3 (PubMed:21421380). Interacts with HTD1 (PubMed:25358503). Interacts directly with DHU1 (PubMed:25193399).
messages: Cytoplasm
messages: Nucleus

3702:AT1G49660
gene id: 3702:AT1G49660
uniprot id: Q9FX94
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in roots, leaves, stems, flowers and siliques.

3702:AT1G62960
gene id: 3702:AT1G62960
uniprot id: Q9LQ10
names: Caution
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: By indole-3-acetic acid (IAA) and cycloheximide (CHX).
messages: Contains a Gln instead of a Glu in position 176 and a Phe residue instead of a Tyr in position 209; these residues being essential in substrate recognition by ACS enzymes.
messages: Expressed in roots.
messages: Homodimer.
messages: Probable aminotransferase. Does not have 1-aminocyclopropane-1-carboxylate synthase (ACS) activity, suggesting that it is not involved in ethylene biosynthesis.

3702:AT4G04930
gene id: 3702:AT4G04930
uniprot id: Q9ZPH4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
messages: Endoplasmic reticulum membrane
messages: No visible phenotype under normal growth conditions.
messages: Specifically expressed in flowers.
messages: Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives. May be required for the biosynthesis of glucosylceramides.

3702:AT4G18600
gene id: 3702:AT4G18600
uniprot id: A0A1P8B4R2
uniprot id: A0A1P8B4R7
uniprot id: A0A1P8B4S1
uniprot id: A0A1P8B4T4
uniprot id: Q5XPK0
names: Domain
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the SCAR/WAVE family.
messages: Contains the N-terminal Scar homology domain (SHD), but unlike the genuine SCAR proteins, lacks the C-terminal VCA (verprolin homology/cofilin homology/acidic) domain.
messages: Expressed in expanding cotyledons, expanding leaves and expanding siliques containing developing embryos. Detected in unopened flower buds. Reduced expression in mature leaves.
messages: Interacts with ABI1 and ABI2.

3702:AT1G30730
gene id: 3702:AT1G30730
uniprot id: Q9SA88
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT4G26760
gene id: 3702:AT4G26760
uniprot id: A0A178V4W3
uniprot id: Q8LEG3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MAP65/ASE1 family.
messages: Cytoplasm
messages: Forms a dimer (By similarity). Binds to microtubules (MT). Bundles polymerized MT via the formation of 25-nm crossbridges with centrally located endocytic MT.
messages: Microtubule-associated protein that stabilize microtubules (MT). Involved in the regulation of MT organization and dynamics. Confers MT resistance to the drug propyzamide and cold conditions.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: phragmoplast
messages: spindle pole

3702:AT1G04440
gene id: 3702:AT1G04440
uniprot id: A0A178WNS3
uniprot id: Q5XF24
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CK1 Ser/Thr protein kinase family. Casein kinase I subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins.
messages: Cytoplasm
messages: Monomer.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: plasmodesma

3702:AT3G25410
gene id: 3702:AT3G25410
uniprot id: A0A654FCF0
uniprot id: Q8RXE8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
messages: May function as sodium-coupled metabolite transporter across the chloroplast envelope.
messages: Membrane
messages: chloroplast envelope

3702:AT2G21120
gene id: 3702:AT2G21120
uniprot id: A0A178W254
uniprot id: Q8GWX2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+) (By similarity).
messages: Acts as a Mg(2+) transporter. Can also transport other divalent cations such as Fe(2+), Sr(2+), Ba(2+), Mn(2+) and Co(2+) but to a much less extent than Mg(2+).
messages: Belongs to the NIPA (TC 2.A.7) family.
messages: Cell membrane
messages: Early endosome
messages: Endosome
messages: Homodimer.
messages: Membrane

3702:AT2G14870
gene id: 3702:AT2G14870
uniprot id: O82325
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G48810
gene id: 3702:AT3G48810
uniprot id: Q9M302
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G05460
gene id: 3702:AT1G05460
uniprot id: Q8GYD9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA2/NAM7 helicase family. SDE3 subfamily.
messages: Cytoplasm
messages: Delayed loss of transgene silencing (post-transcriptional gene silencing (PTGS)), with full silencing in the cotyledons and in the hypocotyl, contrasting with a loss of silencing in true leaves. Impaired maintenance of tobacco rattle virus (TRV)-mediated silencing. Reduced methylation of cytosine residues in targets loci but enrichment of histone-H3 'Lys-4' methylation (H3K4me3) at the same sites.
messages: Interacts with AGO1 and AGO2.
messages: Probable RNA helicase required for post-transcriptional gene silencing (PTGS), a process that provides protection in plants against virus infection and can suppress expression of transgenes. Plays a central role in RNA interference (RNAi) process, a process that mediates mRNA destruction of translational repression. Required for the assembly of the RISC complex, a complex required for target RNA destruction or repression. May be required in the RISC assembly to unwind miRNAs, in the production of single-stranded miRNA from the double-stranded miRNA, a key step in RISC formation. Involved in the amplification of sense-PTGS (S-PTGS), leading to siRNA production. Required for the maintenance but not the initiation of tobacco rattle virus (TRV)-mediated silencing, probably by mediating/maintaining DNA methylation and chromatin-based transcriptional gene silencing at some genomic locations.

3702:AT4G35580
gene id: 3702:AT4G35580
uniprot id: F4JN35
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, rosette leaves, cauline leaves, shoot apex, stems and flowers (PubMed:17158162). Expressed in guard cells (PubMed:18443413).
messages: Induced during normal senescence.
messages: Interacts with calmodulin (CaM) (PubMed:17947243). Interacts with SNI1 (PubMed:22826500).
messages: No visible phenotype under normal growth conditions (PubMed:18443413, PubMed:22826500). Mutant plants display enhanced resistance to the bacterial pathogen P.syringae pv. tomato DC3000 (PubMed:22826500).
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413).

3702:AT3G54020
gene id: 3702:AT3G54020
uniprot id: A0A5S9XKR4
uniprot id: Q9M325
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sphingomyelin synthase family.
messages: Catalyzes the transfer of the phosphorylinositol group from phosphatidylinositol (PI) to phytoceramide, an essential step in sphingolipid biosynthesis.
messages: Expressed at low levels in roots, leaves, stems, flowers and siliques.
messages: Membrane

3702:AT5G57270
gene id: 3702:AT5G57270
uniprot id: A0A384KTN7
uniprot id: Q8W4D1
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G59610
gene id: 3702:AT1G59610
uniprot id: A0A654EJE7
uniprot id: G1JSJ5
uniprot id: Q9LQ55
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Basal shift of ARAC3/ROP6 and ARAC4/ROP2 positioning in root hair-forming cells leading to basal shift of root hair positions.
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
messages: Cell membrane
messages: Interacts with DRP1A at the plasma membrane and in forming clathrin-coated vesicles (CCV).
messages: Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP (By similarity). Collaboratively with DRP1A, participates in clathrin-coated vesicle formation during endocytosis (PubMed:20231465). With DRP1A and PIP5K3, required for the precise coordination of polar ARAC3/ROP6 and ARAC4/ROP2 placement and subsequent root hair positioning during planar polarity formation in root hair-forming cells (PubMed:27251533).
messages: Ubiquitous. Preferentially expressed in siliques.
messages: clathrin-coated vesicle
messages: cytoskeleton

3702:AT5G12110
gene id: 3702:AT5G12110
uniprot id: A0A384KQ94
uniprot id: Q29PY2
uniprot id: Q84WM9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EF-1-beta/EF-1-delta family.
messages: Cell membrane
messages: EF-1 is composed of 4 subunits: alpha, beta (1B-alpha=beta'), delta (1B-beta), and gamma (1B-gamma).
messages: EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP.

3702:AT5G18820
gene id: 3702:AT5G18820
uniprot id: A0A1P8BAR0
uniprot id: A0A1P8BAS2
uniprot id: A0A5S9Y5B6
uniprot id: Q56XV8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chaperonin (HSP60) family.
messages: Involved in protein assisted folding.
messages: Part of the Cpn60 complex composed of 7 alpha and 7 beta subunits.
messages: chloroplast

3702:AT3G12980
gene id: 3702:AT3G12980
uniprot id: A0A1I9LPG3
uniprot id: A0A654F6L1
uniprot id: Q9LE42
names: Caution
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation.
messages: Expressed in young seedlings.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Rosette leaves, stems and flowers.

3702:AT1G34140
gene id: 3702:AT1G34140
uniprot id: F4HT49
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: A.thaliana contains 8 PABP genes.
messages: Belongs to the polyadenylate-binding protein type-1 family.
messages: Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation (By similarity).
messages: Cytoplasm
messages: Expressed predominantly in roots but also at lower levels in immature flowers.
messages: Lacks the PABC domain, which is one of the conserved features of the PAPB family.
messages: Nucleus

3702:AT1G70320
gene id: 3702:AT1G70320
uniprot id: Q8H0T4
names: Developmental Stage
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the UPL family. TOM1/PTR1 subfamily.
messages: Constitutively expressed throughout development post-germination (at protein level).
messages: Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Widely expressed. Expressed in root, stem, cauline and rosette leaf, seedling and flower (at protein level).

3702:AT3G04110
gene id: 3702:AT3G04110
uniprot id: A0A1I9LLK1
uniprot id: A0A1I9LLK2
uniprot id: Q9M8W7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
messages: Expressed predominantly in roots. First detected in the root-shoot junction, and later in lateral roots and at the margin of matures leaves.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel.
messages: Glutamate-gated receptor that probably acts as non-selective cation channel. Can transport sodium, potassium, and calcium ions. Functions as a carbon and nitrogen regulator and/or sensor that regulates carbon and nitrogen metabolism and distinct physiological process such as germination through the control of acid abscisic (ABA) biosynthesis. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells. Seems required for the regulation of the abscisic acid (ABA) signaling pathway that modulates many aspects of plant physiology such as seed germination and response to drought (e.g. stomata opening).
messages: Increased sensitivity to exogenous abscisic acid (ABA) and higher ABA levels in leaves.
messages: May form heteromers.
messages: Membrane

3702:AT4G36130
gene id: 3702:AT4G36130
uniprot id: A0A178UYN8
uniprot id: Q42064
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

3702:AT4G26370
gene id: 3702:AT4G26370
uniprot id: A0A654FSY8
uniprot id: Q93XY7
names: Similarity
messages: Belongs to the NusB family.

3702:AT4G20530
gene id: 3702:AT4G20530
uniprot id: P0CJ60
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G77405
gene id: 3702:AT1G77405
uniprot id: Q1PFC5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT3G61830
gene id: 3702:AT3G61830
uniprot id: A0A178V7A7
uniprot id: A0A1I9LTM9
uniprot id: Q9C5W9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT1G65470
gene id: 3702:AT1G65470
uniprot id: A0A5S9WS76
uniprot id: F4IBG1
uniprot id: Q9SXY0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CHAF1A family.
messages: Cell cycle-regulated, showing a peak in the S-phase.
messages: Component of the chromatin assembly factor 1 (CAF-1) complex, composed of FAS1, FAS2 and MSI1. Interacts with CYP71.
messages: Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Assembles histone octamers onto replicating DNA in vitro. Required for several aspects of development, including seedling growth and leaf hair differentiation. Plays a critical role in the organization of shoot apical meristem (SAM) and root apical meristem (RAM) during postembryonic development by facilitating stable maintenance of gene expression states. Seems not required to maintain transcriptional repression of heterochromatic genes. Involved in heterologous recombination. May repress endocycle.
messages: Expressed in the shoot apical meristem, young leaf primordia, root tip and first lateral root primordium at the hypocotyl/root junction.
messages: Fasciated plants with broad, flat stems and disrupted phyllotaxy. Shoot apical meristem enlargement and altered floral development. Reduced heterochromatin content, more open conformation of euchromatin and dramatic increase of homologous recombination.
messages: Nucleus

3702:AT5G26860
gene id: 3702:AT5G26860
uniprot id: A0A2H1ZE77
uniprot id: A0A654G4C9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: Homohexamer or homoheptamer. Organized in a ring with a central cavity.
messages: Mitochondrion matrix

3702:AT5G22490
gene id: 3702:AT5G22490
uniprot id: A0A1P8BC64
uniprot id: Q9FK89
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Membrane
messages: Mostly expressed in stems and siliques.

3702:AT5G59550
gene id: 3702:AT5G59550
uniprot id: Q940T5
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
messages: E3 ubiquitin-protein ligase involved in the positive regulation of abscisic acid-dependent drought stress responses. Possesses E3 ubiquitin ligase activity in vitro.
messages: Induced by abscisic acid (ABA), and drought and salt stresses.
messages: No visible phenotype under normal growth conditions, but mutant plants have decreased sensitivity to abscisic acid (ABA) and reduced tolerance to drought stress.
messages: cytosol

3702:AT1G27120
gene id: 3702:AT1G27120
uniprot id: A0A1P8ATG4
uniprot id: Q8GXG6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 31 family.
messages: Expressed in stems, cauline leaves and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. Utilizes UDP-galactose solely as sugar donor. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth.
messages: Reduced levels of arabinogalactan proteins. Root hair defects. Reduced seed sets. Increased sensitivity to salt stress.

3702:AT2G24530
gene id: 3702:AT2G24530
uniprot id: A0A384KC14
uniprot id: Q58G10
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G07600
gene id: 3702:AT3G07600
uniprot id: Q9SSF0
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Contains an apparent HMA-like domain but lacks the core conserved Cys-X-X-Cys motif.
messages: Probable heavy-metal-binding protein.

3702:AT5G63920
gene id: 3702:AT5G63920
uniprot id: A0A654GDT9
uniprot id: Q9LVP1
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type IA topoisomerase family.
messages: Binds two Mg(2+) ions per subunit.
messages: Component of the RMI complex, containing at least TOP3A and RMI1. The RMI complex interacts with RECQL4A (By similarity).
messages: Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand.
messages: Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone. Essential component of the RMI complex, a complex that plays an important role in the resolution step of homologous recombination, in a process called Holliday Junction dissolution, to limit DNA crossover formation in cells. Together with RMI1, is essential for the resolution of meiotic recombination intermediates, a step that prevents entanglement of the parental chromosomes. May have DNA decatenation activity.
messages: Severe developmental defects and early lethality.

3702:AT5G24590
gene id: 3702:AT5G24590
uniprot id: Q9LKG8
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Accumulates 2 days post infection with turnip crinkle virus (TCV) (PubMed:24418554).
messages: (Microbial infection) Compromised function in defense response pathway when interacting with the invading viral capsid protein (CP) of turnip crinkle virus (TCV) due to abnormal subcellular localization.
messages: (Microbial infection) Interacts via its C-terminal region with the N-terminal region of the turnip crinkle virus (TCV) capsid protein (CP); this interaction prevents its nuclear localization and inhibits its function in basal resistance response pathway.
messages: Endomembrane system
messages: Increased replication of turnip crinkle virus (TCV) and cucumber mosaic virus (CMV) (PubMed:18785827, PubMed:24418554). Normal HRT-mediated hypersensitive response (HR) and resistance to TCV (PubMed:18785827). Delayed flower development in antisense asTIP plants (PubMed:24418554).
messages: Induced by bacterial pathogens type III effector proteins (TTEs).
messages: Nucleus
messages: Phosphorylated at Thr-142. Phosphorylation at Thr-142 is required for nuclear import.
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator essential for the anti-viral defense called virus basal resistance response pathway (PubMed:11041886, PubMed:15629774, PubMed:18785827, PubMed:24418554). Not involved in HRT-mediated hypersensitive response (HR) and resistance to TCV (PubMed:18785827). Binds DNA non specifically (PubMed:15629774). Activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity).

3702:AT3G06490
gene id: 3702:AT3G06490
uniprot id: A0A178V5C1
uniprot id: Q9LDE1
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed specifically in flowers. Restricted to anthers in maturing flowers. Strongest expression in the vascular and connective tissue where the anther attaches to the filament. Not detected in pollen.
messages: Interacts with BOI, but not with BRG1.
messages: Nucleus
messages: Reduced male fertility associated with delayed anther dehiscence, reduced pollen viability and decreased fecundity. Increased susceptibility to Botrytis infection. Myb24 and myb108 double mutant has a reduced fertility and a greatly reduced seed set relative to the myb108 parental allele.
messages: Transcription factor contributing to the regulation of stamen maturation and male fertility in response to jasmonate signaling. Required for correct timing of anther dehiscence. Acts as a negative regulator of abscisic acid-induced cell death. Not involved in the regulation of BOI. Regulated by MYB21 and at a lower level by MYB24. Negatively regulated by the proteasome in an SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner.
messages: Ubiquitinated in vitro by BOI.
messages: Up-regulated by jasmonate and pathogen infection.

3702:AT4G28660
gene id: 3702:AT4G28660
uniprot id: A0A5S9XXM7
uniprot id: F4JM05
uniprot id: Q8W0Y8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Psb28 family.
messages: Part of the photosystem II complex.
messages: chloroplast thylakoid membrane

3702:AT3G04750
gene id: 3702:AT3G04750
uniprot id: Q9SR01
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT5G17290
gene id: 3702:AT5G17290
uniprot id: Q9FFI2
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG5 family.
messages: Conjugated to ATG12.
messages: Conjugated to ATG12; which is essential for autophagy. Conjugation with ATG12 involves ATG7 as an E1-like activating enzyme and ATG10 as an E2-like conjugating enzyme (By similarity).
messages: Cytoplasm
messages: Mutant plants are hypersensitive to nitrogen or carbon starvation (PubMed:16040659). Early senescence phenotype (PubMed:16040659, PubMed:19773385). Hyper accumulation of salicylic acid (SA) (PubMed:19773385). Increased number of peroxisomes and accumulation of peroxisomal proteins (PubMed:24463818).
messages: Required for autophagy. Conjugation to ATG12 is essential for plant nutrient recycling (PubMed:16040659). Involved in a negative feedback loop that modulates NPR1-dependent salicylic acid (SA) signaling and limits senescence and immunity-related programmed cell death (PCD) in plants (PubMed:19773385). Involved in complete proteolysis of chloroplast stroma proteins in senescent leaves (PubMed:23327451). Involved in the degradation of damaged peroxisomes (PubMed:24463818).
messages: Ubiquitous.

3702:AT5G20710
gene id: 3702:AT5G20710
uniprot id: A0A1P8BAR3
uniprot id: Q9SCV5
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Expressed in flowers.
messages: apoplast

3702:AT1G51700
gene id: 3702:AT1G51700
uniprot id: A0A384L6K9
uniprot id: O82155
uniprot id: Q1ECG2
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

3702:AT3G18840
gene id: 3702:AT3G18840
uniprot id: A0A178VAZ2
uniprot id: Q9LHN5
names: Caution
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G18830
gene id: 3702:AT4G18830
uniprot id: A0A5S9XU16
uniprot id: Q8VZN1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Embryonic lethality when homozygous.
messages: Expressed in roots, rosette and cauline leaves, and flower buds.
messages: Interacts with BLH1, BLH2, BLH3, BLH4, BLH6 and BLH10.
messages: Nucleus
messages: Plants over-expressing OFP5 show kidney-shaped cotyledons, round and curled leaves, small rosette size, late flowering, reduced fertilization and round seeds.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors. Required for embryo development.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT4G10640
gene id: 3702:AT4G10640
uniprot id: Q7XA83
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (PubMed:28115582). Regulates cell shape and elongation in aerial organs (i.e. cotyledons, leaves, and hypocotyls) probably by regulating cortical microtubules (MT) arrays orientation (PubMed:28115582). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: No visible phenotype.
messages: cytoskeleton

3702:AT1G14130
gene id: 3702:AT1G14130
uniprot id: A0A178WB88
uniprot id: Q9XI75
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT4G19000
gene id: 3702:AT4G19000
uniprot id: A0A2H1ZEN0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G55510
gene id: 3702:AT5G55510
uniprot id: A0A178U7M6
uniprot id: Q6NKU9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family.
messages: Essential core component of the TIM22 complex, a complex that mediates the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane.
messages: Expressed in young cotyledons, roots, flowers and leaves.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Up-regulated after antimycin A or rotenone treatments.

3702:AT1G31470
gene id: 3702:AT1G31470
uniprot id: F4I9E1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Failure of fusion of the polar nuclei during megagametogenesis.
messages: Membrane
messages: Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed:16698901).

3702:AT5G44030
gene id: 3702:AT5G44030
uniprot id: A0A068FIL6
uniprot id: A0A1R7T3H5
uniprot id: A0A1R7T3H6
uniprot id: Q84JA6
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening.
messages: Cell membrane
messages: Confined to secondary cell wall developing tissues such as xylems and interfascicular regions. Expressed in roots, hypocotyls, leaves, inflorescences and flowers.
messages: Enhanced resistance to the pathogens Ralstonia solanacearum and Plectosphaerella cucumerina.
messages: Interacts with CESA7 and CESA8. Assembly with CESA7 and CESA8 is required for functional complex and localization in secondary cell wall deposition sites. Interacts with STL1 and STL2, but not with GOT1 (PubMed:27277162).
messages: Membrane
messages: Not expressed in embryos. In young leaves, localized in transient patches along the vascular system. In young inflorescence stems, observed in vascular bundles of primary xylems. In maturing inflorescence stems, most pronounced in regions of developing interfascicular fibers.
messages: S-acylated.

3702:AT1G62020
gene id: 3702:AT1G62020
uniprot id: A0A178WAY4
uniprot id: Q94A40
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G22890
gene id: 3702:AT4G22890
uniprot id: Q8H112
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PGR5 family.
messages: Disulfide bonds; Cys-300 and Cys-303 are probably involved in the formation of disulfide bridges with 'Cys-11' and 'Cys-105' of PGR5 while Cys-272 and Cys-275 are probably involved in the binding of a Fe-containing cofactor (FCC).
messages: Ferredoxin-plastoquinone reductase involved in cyclic electron flow (CEF) around photosystem I. The homodimer is probably not involved in CEF.
messages: Homodimer and heterodimer with PGR5. Interacts with PGR5, FD2, petC, psaD1, LFNR1 and LFNR2. Interacts also with a Fe-containing cofactor (FCC).
messages: Inhibited by antimycin A.
messages: No visible phenotype; due to the redundancy with PGRL1B. Pgrl1a and pgrl1b double mutant grows slowly and has pale green leaves.
messages: The C-terminal loop (258-324) is required for ferredoxin binding.
messages: Thioredoxins prevent homodimerization.
messages: Up-regulated by drought stress.
messages: chloroplast thylakoid membrane

3702:AT5G51830
gene id: 3702:AT5G51830
uniprot id: A0A178UAE0
uniprot id: Q9FLH8
names: Function
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.
messages: May play an important role in maintaining the flux of carbon towards starch formation.

3702:AT2G33480
gene id: 3702:AT2G33480
uniprot id: O22798
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator of the mannan synthase CSLA9. Recognizes and binds to DNA-specific sequence of CSLA9 promoter.

3702:AT1G68400
gene id: 3702:AT1G68400
uniprot id: Q9M9C5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT2G24010
gene id: 3702:AT2G24010
uniprot id: A0A1P8B140
uniprot id: A0A1P8B146
uniprot id: A0A1P8B149
uniprot id: A0A5S9X0L7
uniprot id: O82229
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expression not detected.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT3G53520
gene id: 3702:AT3G53520
uniprot id: A0A178V9J6
uniprot id: B3H4I6
uniprot id: F4JAG3
uniprot id: Q8VZC0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.
messages: Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.
messages: Golgi stack membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT5G25450
gene id: 3702:AT5G25450
uniprot id: A0A178UDJ6
uniprot id: A0A178UDK8
uniprot id: A0A384LCQ4
uniprot id: F4JWS8
uniprot id: F4JWS9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UQCRB/QCR7 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341, PubMed:18305213). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Mitochondrion inner membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G44175
gene id: 3702:AT2G44175
uniprot id: Q3EBG4
names: Similarity
messages: Belongs to the NMT family.

3702:AT4G32070
gene id: 3702:AT4G32070
uniprot id: F4JTI1
names: Disruption Phenotype
names: Function
names: Induction
messages: Carboxylate clamp-type tetratricopeptide repeat protein that may act as a potential Hsp90/Hsp70 co-chaperone (PubMed:20856808). Contributes to polar growth of root hairs (PubMed:28096376).
messages: No clumped-chloroplasts phenotype (PubMed:22025705). Phox1 and phox4 double mutants show no clumped-chloroplasts phenotype, but a 46% reduction in root hair growth (PubMed:22025705, PubMed:28096376). Phox1, phox3 and phox4 triple mutants and phox1, phox2, phox3 and phox4 quadruple mutants show a 70% reduction in root hair growth (PubMed:28096376).
messages: Up-regulated by abscisic acid treatment, and by cold, osmotic and salt stress.

3702:AT1G33430
gene id: 3702:AT1G33430
uniprot id: A0A1P8AV17
uniprot id: F4HR76
uniprot id: Q9C809
uniprot id: W8QP76
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane
messages: Sequencing errors.

3702:AT3G16640
gene id: 3702:AT3G16640
uniprot id: A0A654F7V9
uniprot id: P31265
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TCTP family.
messages: Expressed in flowers, leaves and stems (PubMed:16902407, PubMed:19060111). Expressed in roots and siliques. Detected in seeds. Highest expression in actively dividing and differentiating cell types, such as the meristematic and division zones of the root, the embryo or the elongating tube of germinating pollen (PubMed:19060111). Expressed in cotyledons, leaves, hypocotyls and roots. Detected in mitotically active tissues such as shoot apical meristems, root tips, lateral root initiation regions and anthers, and in guard cells (PubMed:22610367).
messages: General regulator required for the development of the entire plant. Regulates the duration of cell cycle (PubMed:20736351). Probable activator of Rab GTPases and upstream regulator of the cell growth-regulating TOR (target of rapamycin) network (PubMed:19060111, PubMed:20736351). Might also control spatial growth in pollen tubes or root hairs via the TORC2 signaling branch (PubMed:19060111). Involved in the regulation of abscisic acid- and calcium-mediated stomatal closure, but not in light or H(+)-pumping induced stomatal opening. May regulate microtubules depolymerization (PubMed:22610367). Binds calcium and has a cytoprotective function (PubMed:24040826).
messages: Homodimer. Interacts with the Rab GTPases RABA4A, RABA4B, RABF1 and RABF2B (PubMed:20736351). Interacts with microtubules and heterodimers of alpha- and beta-tubulins. Cytosolic calcium positively regulates this interaction (PubMed:22610367).
messages: Knockdown mutants have retarded growth due to decreased cell size.
messages: Male gametophytic phenotype with normal pollen formation and germination but impaired pollen tube growth (PubMed:19060111). Embryonic lethality when homozygous due to a retarded development of the embryos that eventually collapse at the silique dehiscence stage (PubMed:20736351).
messages: Up-regulated by momilactone B (PubMed:26058145). Not regulated by light (PubMed:19060111). Up-regulated by abscisic acid (PubMed:22610367).
messages: cytosol

3702:AT4G15330
gene id: 3702:AT4G15330
uniprot id: A0A178V7C8
uniprot id: A0A1P8B8J8
uniprot id: Q0WQ07
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Cleaves the arabidiol side chain at C15 to form 14-apo-arabidiol and a side-chain fragment (PubMed:23570231, PubMed:25724638). Involved in the biosynthesis of the volatile homoterpene (E)-4,8-dimethyl-1,3,7-nonatriene (DMNT) in roots. Involved in the production of DMNT by degrading the triterpene arabidiol. May be involved in the defense again the fungal root pathogen Pythium irregulare by producing DMNT (PubMed:25724638).
messages: Expressed in root stele, root cortex, root epidermis, root pericycle of the root hair zone, and quiescent center at the root meristematic zone.
messages: Induced by jasmonate.
messages: Membrane

3702:AT4G08685
gene id: 3702:AT4G08685
uniprot id: A0A178UVW6
uniprot id: Q9SZY5
names: Similarity
messages: Belongs to the Ole e I family.

3702:AT4G29900
gene id: 3702:AT4G29900
uniprot id: Q9SZR1
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calmodulin.
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIB subfamily.
messages: Membrane
messages: The N-terminus contains an autoinhibitory calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.
messages: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum.

3702:AT4G31730
gene id: 3702:AT4G31730
uniprot id: A0A178UXJ2
uniprot id: O81775
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GLUTAMINE DUMPER 1 (TC 9.B.60) family.
messages: Cell membrane
messages: Expressed in the vascular tissues and in hydathodes. Expressed in the phloem and xylem (at the protein level).
messages: Interacts with LOG2.
messages: Membrane
messages: Overexpression of GLUTAMINE DUMPER 1 leads to free amino acid levels accumulation, plant size decrease, hypersecretion of glutamine from hydathodes and to a full resistance to geminivirus infection (Ref.9, PubMed:15208395, PubMed:20042021, PubMed:20018597).
messages: Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators. Required the interaction with the RING-type E3 ubiquitin-protein ligase LOG2 to fulfill its function. Plays a role in the Gln export at hydathodes, at xylem parenchyma into xylem sap and from mesophyll into leaf apoplasm. Acts upstream genes involved in the salicylic acid (SA) pathway and in the geminivirus-host interaction.
messages: The VIMAG motif is necessary for the function of the protein.
messages: Ubiquitinated by LOG2 (in vitro).

3702:AT1G54100
gene id: 3702:AT1G54100
uniprot id: A0A178W3F2
uniprot id: Q9SYG7
names: Induction
names: Similarity
names: Subunit
messages: Belongs to the aldehyde dehydrogenase family.
messages: By abscisic acid (ABA) and dehydration in roots and plantlets, and by salt stress in plantlets.
messages: Homotetramer.

3702:AT1G14420
gene id: 3702:AT1G14420
uniprot id: A0A5S9UFR3
uniprot id: Q680M0
uniprot id: Q9M9S2
names: Cofactor
names: Similarity
names: Tissue Specificity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.
messages: Expressed in pollen, but not in leaves.

3702:AT1G76430
gene id: 3702:AT1G76430
uniprot id: A0A384KTV4
uniprot id: Q0WRM8
uniprot id: Q9S735
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Although related to the sugar transporter family, it does not transport sugars.
messages: Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.
messages: High-affinity transporter for external inorganic phosphate.
messages: Membrane
messages: Slightly induced in roots during phosphate starvation.

3702:AT4G14785
gene id: 3702:AT4G14785
uniprot id: A0A178UZC3
uniprot id: P82642
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Flower buds.
messages: Secreted

3702:AT3G13450
gene id: 3702:AT3G13450
uniprot id: Q9LDY2
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Barely detected in non senescent green leaves, accumulated slightly at the early stage of leaf senescence and strongly expressed at the late stage of leaf senescence.
messages: By dark treatment. Down-regulated by sucrose in a hexokinase dependent manner. Up-regulated by Leucine and its derivative alpha-keto acid (KIC).
messages: Expressed in the non-photosynthetic organs such as siliques, flowers and roots.
messages: Heterotetramer of alpha and beta chains.
messages: Mitochondrion matrix
messages: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). Required during sugar starvation and acts under the control of a sugar-sensing mechanism involving Ser/Thr kinases and phosphatases.

3702:AT3G09820
gene id: 3702:AT3G09820
uniprot id: Q9SF85
names: Activity Regulation
names: Developmental Stage
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives (PubMed:11115893). Essential to sustain methyl recycling (PubMed:17272833).
messages: Belongs to the carbohydrate kinase PfkB family.
messages: Inactivated by the begomovirus AL2 protein or the curtovirus L2 protein.
messages: Interacts with the begomovirus AL2 protein and the curtovirus L2 protein.
messages: Up-regulated during the lignification process in inflorescence stems.
messages: Widely expressed.

3702:AT1G05580
gene id: 3702:AT1G05580
uniprot id: A0A178W5S7
uniprot id: Q8VYD4
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: Endoplasmic reticulum membrane
messages: Mutants with impaired chloroplast development that display aberrant chloroplast structure (PubMed:15220473). No defect in male fertility, due to redundancy with CHX21. Chx21 and chx23 double mutants are male sterile (PubMed:21239645).
messages: Operates as a K(+)/H(+) antiporter or Na(+)/H(+) antiporter of the chloroplast envelope that functions in pH homeostasis and chloroplast development. Monovalent cation transporter with a preference for Cs(+), K(+) and Rb(+) relative to Na(+) or Li(+). Required for pollen tube guidance, but not for normal pollen development. May also be involved in the development or function of the female gametophyte.
messages: Specifically expressed in flower buds and pollen. Expressed in leaves, roots and stems (PubMed:15220473).
messages: The article by Evans et al was retracted by the editors due to concerns over image manipulation, which raised sufficient doubts regarding the credibility of the study.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast membrane

3702:AT2G26310
gene id: 3702:AT2G26310
uniprot id: A0A178VYJ7
uniprot id: A0A1P8B1G4
uniprot id: A0A2H1ZE28
uniprot id: Q84RK2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the chalcone isomerase family.
messages: Derived from proteomicsdata.
messages: Expressed in developing cotyledons, young seedlings, roots, seeds, embryos, macrospores, preanthesis and tapetum. Restricted to developing and reproductive tissues.
messages: Fatty-acid-binding protein. Associates with saturated fatty acid.
messages: No visible phenotype during vegetative growth.
messages: chloroplast stroma

3702:AT2G37190
gene id: 3702:AT2G37190
uniprot id: A0A178VR43
uniprot id: P50883
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Binds directly to 26S ribosomal RNA.

3702:AT1G24881
gene id: 3702:AT1G24881
uniprot id: A0A178W943
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G10180
gene id: 3702:AT3G10180
uniprot id: A0A1I9LLG4
uniprot id: F4J2K4
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.

3702:AT1G05440
gene id: 3702:AT1G05440
uniprot id: Q9ZVZ4
names: Similarity
messages: Belongs to the ERG2 family.

3702:AT1G04420
gene id: 3702:AT1G04420
uniprot id: A0A178WJS5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G70580
gene id: 3702:AT1G70580
uniprot id: A0A178WFM8
uniprot id: Q9S7E9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. Alanine aminotransferase subfamily.
messages: Catalyzes the Glu:glyoxylate aminotransferase (GGT), Ala:glyoxylate aminotransferase (AGT), Ala:2-oxoglutarate aminotransferase (AKT) and Glu:pyruvate aminotransferase (GPT) reactions in peroxisomes.
messages: Expressed at low levels in seedlings, leaves, flowers, roots, and green siliques.
messages: Homodimer.
messages: Peroxisome
messages: The N-terminus is blocked.

3702:AT1G06225
gene id: 3702:AT1G06225
uniprot id: Q3EDH8
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate.
messages: Mostly expressed in roots, stems and apex, and, to a lower extent, in seedlings, leaves, flowers, siliques and pollen.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-78 enhances binding affinity of the CLE3p peptide for its receptor.
messages: extracellular space

3702:AT1G48630
gene id: 3702:AT1G48630
uniprot id: A0A178W908
uniprot id: Q9C4Z6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily.
messages: Homodimer and heterodimer with RACK1A or RACK1B (Probable). Interacts with GB1, MEKK1, MKK4, MKK5, MPK3 and MPK6, but not with GPA1 or MPK4 (PubMed:25731164).
messages: Minor component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes (PubMed:18947417). MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway (PubMed:25731164).
messages: No visible phenotype under normal growth condition.
messages: Widely expressed.

3702:AT2G45650
gene id: 3702:AT2G45650
uniprot id: A0A654F284
uniprot id: P29386
uniprot id: Q1PEU3
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Forms a heterodimer with AGAMOUS. Interacts with AGL15 and AGL16.
messages: Nucleus
messages: Preferentially expressed in flowers.
messages: Probable transcription factor. Forms a heterodimer via the K-box domain with AG, that could be involved in genes regulation during floral meristem development.

3702:AT1G05240
gene id: 3702:AT1G05240
uniprot id: P0DI10
uniprot id: Q67Z07
names: Cofactor
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: Slightly expressed in roots.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated transiently by a cold treatment.

3702:AT3G04280
gene id: 3702:AT3G04280
uniprot id: Q9M8Y4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARR family. Type-A subfamily.
messages: Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling (By similarity).
messages: Nucleus
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.

3702:AT3G57420
gene id: 3702:AT3G57420
uniprot id: A0A384KXL5
uniprot id: Q9SCN0
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the STELLO family.
messages: Expressed in cells that are expanding or producing secondary cell walls.
messages: Golgi apparatus membrane
messages: Homo- and heterodimer with STL1 (PubMed:27277162). Interacts with CESA1, CESA3, CESA4, CESA6, CESA7 and CESA8, but not with GOT1 (PubMed:27277162).
messages: In classical Greek, STELLO mean 'to set in order, arrange, send'.
messages: No visible phenotype, due to the redundancy with STL1. Stl1 and stl2 double mutants are impaired in cellulose production and exhibit a stunted growth.
messages: Probable glycosyltransferase regulating the assembly and trafficking of cellulose synthase complexes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G35770
gene id: 3702:AT5G35770
uniprot id: Q9FKH1
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.
messages: Mutations in the SAP gene result in the ectopic expression of AGAMOUS, leading to partial homeotic transformation of the external floral organs. Mutations affect equally ovule development and cause floral sterility.
messages: Nucleus
messages: Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

3702:AT2G42880
gene id: 3702:AT2G42880
uniprot id: A0A1P8B0K7
uniprot id: A0A654F2L6
uniprot id: Q9SJG9
names: Activity Regulation
names: Domain
names: PTM
names: Similarity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-187 and Tyr-189, which activates the enzyme.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT3G46820
gene id: 3702:AT3G46820
uniprot id: A0A178VFV2
uniprot id: P48485
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPP phosphatase family.
messages: Belongs to the PPP phosphatase family. PP-1 subfamily.
messages: Binds 2 manganese ions per subunit.
messages: Cytoplasm
messages: Nucleus
messages: Phosphatase activity is strongly reduced by the protein phosphatase inhibitor 2 (I-2).
messages: Serine/threonine-protein phosphatase that possesses phosphatase activity toward para-nitrophenyl phosphate (pNPP) in vitro.

3702:AT2G40850
gene id: 3702:AT2G40850
uniprot id: O22199
names: Function
names: Similarity
messages: Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily.
messages: The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3).

3702:AT4G39510
gene id: 3702:AT4G39510
uniprot id: A0A178V036
uniprot id: Q9SVA7
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G56660
gene id: 3702:AT5G56660
uniprot id: P54970
uniprot id: Q5HZ30
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase M20 family.
messages: Endoplasmic reticulum lumen
messages: Expressed in leaves, stems, siliques, seeds and flowers. Detected in the distal tips of cotyledons and seedling leaves, hydathodes of leaves from mature plants, pollen, ovules and developing seeds.
messages: Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Ala, IAA-Leu, IAA-Met, IAA-Phe, IAA-Ser, IAA-Thr, IAA-Tyr and IAA-Val (PubMed:11923288). Is the most efficient enzyme of the ILL family for IAA-Ala (PubMed:11923288). Not important for IAA-Leu hydrolysis in roots (PubMed:15155875). May act with ILR1 to provide free IAA to germinating seedlings (PubMed:15155875).
messages: Monomer.
messages: No effect on the sensitivity to the inhibition of root elongation caused by IAA-Leu or IAA-Ala.
messages: The Mn(2+) ion enhances activity.

3702:AT5G44130
gene id: 3702:AT5G44130
uniprot id: A0A178U8W9
uniprot id: Q9FFH6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT5G67090
gene id: 3702:AT5G67090
uniprot id: A0A5S9YJS0
uniprot id: Q9FHA4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT2G46130
gene id: 3702:AT2G46130
uniprot id: A0A654F2D2
uniprot id: Q8GY11
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-c family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT2G42380
gene id: 3702:AT2G42380
uniprot id: F4IN23
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in vascular tissues of leaves, stems and siliques, anthers, filaments, tapetum, mature pollen grains, pistil vascular tissues and papillar cells, and funiculi.
messages: Forms heterodimers with BZIP18, BZIP43 and VIP1/BZIP51.
messages: Nucleus
messages: Pollen morphological defects, reduced pollen germination efficiency and pollen tube growth.
messages: Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism.

3702:AT4G05390
gene id: 3702:AT4G05390
uniprot id: F4JGF4
uniprot id: Q9M0V6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ferredoxin--NADP reductase type 1 family.
messages: Expressed in shoots and roots. Less abundant in roots than RFNR2.
messages: Maintains the supply of reduced ferredoxin under non-photosynthetic conditions.
messages: Up-regulated by nitrate in roots while down-regulated in shoots.
messages: chloroplast

3702:AT4G18180
gene id: 3702:AT4G18180
uniprot id: A0A654FQN4
uniprot id: F4JQS2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G22470
gene id: 3702:AT4G22470
uniprot id: F4JLV4
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT2G47800
gene id: 3702:AT2G47800
uniprot id: Q7DM58
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: By salicylic acid (SA), menadione and, to a lower extent, by 1-chloro-2,4-dinitrobenzene (CDNB), benoxacor, cloquintocet, fenchlorazol and fluorazol.
messages: Cell membrane
messages: Inhibited by methotrexate.
messages: Involved in the regulation of stomatal aperture. May function as a high-capacity pump for folates.
messages: Plants have larger stomatal aperture and increased drought susceptibility, but are not affected by the ABA signal transduction pathway.
messages: Ubiquitous. High expression in the guard cells.
messages: Vacuole membrane

3702:AT3G56850
gene id: 3702:AT3G56850
uniprot id: A0A178VIK4
uniprot id: Q9LES3
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family. ABI5 subfamily.
messages: Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
messages: DNA-binding heterodimer with ABI5/DPBF1, DPBF2 or EEL/DPBF4. Interacts with the AFP proteins AFP1, AFP2, AFP3 and AFP4.
messages: Expressed in embryo during the latest stages of seed maturation.
messages: Nucleus
messages: Predominantly expressed in seeds.

3702:AT5G55960
gene id: 3702:AT5G55960
uniprot id: A0A178UH08
uniprot id: Q93XX1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
messages: Membrane

3702:AT2G07040
gene id: 3702:AT2G07040
uniprot id: Q84JQ4
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in pollen and/or in flowers, but not in leaves (PubMed:12139002). Expressed in pollen tube (PubMed:18000057).
messages: No effect on pollen germination and growth. Prk1 and prk2 or prk2 and prk5 double mutants have no effect on pollen germination and growth. Prk1, prk2 and prk5 triple mutant shows reduced pollen tube elongation.
messages: Part of a complex containing ROPGEF1 and ARAC11/ROP1 (PubMed:23024212). The interaction between PRK2, ROPGEF1 and ARAC11/ROP1 is phosphorylation-independent (PubMed:23024212). Interacts with ROPGEF12 (via C-terminus)(PubMed:18000057). Interacts with ROPGEF1 (via PRONE domain)(PubMed:23024212).
messages: Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth (PubMed:23024212, PubMed:24136420). Phosphorylates ROPGEF1 in its C-terminal region, releasing its auto-inhibition, and thereby activating the ROP1 signaling pathway (PubMed:23024212). May act as a scaffolding protein, recruiting ROPGEF12 to the plasma membrane by binding to its C-terminal domain (PubMed:18000057). Phosphorylates ROPGEF12, releasing its auto-inhibition (PubMed:18000057).
messages: The juxtamembrane domain (274-319) is necessary for a relatively uniform plasma membrane localization. The C-terminal domain (614-647) is required for the induction of pollen tube depolarization. Both domains are required for the interaction of PRK2 with ROPGEF12.
messages: The phosphorylation activity is calcium-independent.
messages: The protein kinase domain may be catalytically impaired due to the lack of the conserved Asp active site at position 466, which is replaced by a His residue.

3702:AT5G10770
gene id: 3702:AT5G10770
uniprot id: A0A654G013
uniprot id: Q8S9J6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A1 family.
messages: Cell membrane
messages: Probably not redundant with AED1 and not involved in restriction of salicylic acid (SA) or systemic acquired resistance (SAR) signaling.
messages: Up-regulated in AED1 mutants.

3702:AT1G49230
gene id: 3702:AT1G49230
uniprot id: Q6NQG7
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT3G14270
gene id: 3702:AT3G14270
uniprot id: Q9LUM0
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Endosome membrane
messages: Leaf-curling phenotype. Root growth inhibition, root gravitropic response, and hyposensitivity to exogenous auxin. Fab1a and fab1b double mutant displays an abnormal vacuolar phenotype late in pollen development leading to inviable pollen (PubMed:19846542).
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity). Plays an important role in maintenance of endomembrane homeostasis including endocytosis, vacuole formation, and vacuolar acidification processes. Required for development of viable pollen. Might mediate recycling of auxin transporters.
messages: Ubiquitous with highest expression levels in the root hair zone, pollen, and stamens.

3702:AT5G13600
gene id: 3702:AT5G13600
uniprot id: A0A178URB0
uniprot id: Q9FNB3
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT1G01390
gene id: 3702:AT1G01390
uniprot id: A0A1P8AV09
uniprot id: A0A384L9J0
uniprot id: Q8W4C2
uniprot id: W8PVF7
names: Caution
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10520
gene id: 3702:AT1G10520
uniprot id: A0A1P8APE6
uniprot id: A0A654E9R3
uniprot id: Q9FNY4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-X family.
messages: DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template-independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
messages: Induced by UV-B.
messages: Interacts with the DNA repair proteins XRCC4 and LIG4 (PubMed:23660835). Interacts with HSP90-1 (PubMed:26230318).
messages: Nucleus
messages: Repair polymerase involved in base excision repair (BER) and responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Has both DNA polymerase and terminal transferase activities. Has a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity (By similarity). Involved in the repair of transposon-induced DNA double strand breaks (DSBs) (PubMed:21889425). Involved in repair of UV-B-mediated DNA damage during seedling development through an excision repair mechanism (PubMed:21227935). Involved the repair of DSBs induced by high salinity and DNA cross-linking agent. Functions via the DNA non-homologous end joining (NHEJ) pathway.

3702:AT1G22440
gene id: 3702:AT1G22440
uniprot id: Q9SK87
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.

3702:AT3G57710
gene id: 3702:AT3G57710
uniprot id: A0A384L127
uniprot id: Q9SVY5
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. ZRK subfamily.
messages: Component of a stable high-order oligomeric complex made of RKS1 and RPP13L4/ZAR1 which recruits Xanthomonas campestris effector XopAC/AvrAC-mediated uridylylated PBL2 in the presence of ATP to form a wheel-like pentameric resistosome; this complex triggers immunity toward X.campestris in vascular tissues (PubMed:26355215, PubMed:30948527, PubMed:30948526). Interacts with RPP13L4/ZAR1 and uridylylated PBL2 (PubMed:26355215, PubMed:30948526).
messages: Expressed at high levels in germinating seeds and at lower levels in adult leaves.
messages: Increased sensitivity to the pathogenic biotrophic bacteria Xanthomonas campestris pv. campestris (Xcc).
messages: Induced by elevated temperature (e.g. at 25 degrees Celsius).
messages: Membrane
messages: Serine/threonine-protein kinase that confers a broad-spectrum quantitative disease resistance (QDR) to the pathogenic biotrophic bacteria Xanthomonas campestris (e.g. pv. campestris (Xcc), pv. raphani, pv. armoriaceae and pv. incanae) by restricting bacterial spread to the vascular system from the infection site; X.campestris causes black rot disease in crops (PubMed:24068949, PubMed:26355215, PubMed:30948526). Seems to not have any kinase activity (PubMed:24068949).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G26030
gene id: 3702:AT3G26030
uniprot id: A0A654FHX1
uniprot id: Q9ZQY6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B56 family.
messages: Belongs to the phosphatase 2A regulatory subunit.
messages: Cytoplasm
messages: Expressed ubiquitously.
messages: Induced by epibrassinolide.
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (Probable). Interacts with SRK2E/OST1 (PubMed:26175513).
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment.
messages: The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

3702:AT1G61030
gene id: 3702:AT1G61030
uniprot id: Q9C951
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WAPL family.
messages: Chromosome
messages: Expressed in roots, leaves, buds and siliques.
messages: Interacts with the cohesin complex throughout the cell cycle.
messages: Nucleus
messages: Plants missing both WAPL1 and WAPL2 have relatively normal growth (slightly slower) and development but exhibit a significant reduction in male and female fertility (aborted pollen and ovules prior to fertilization and embryo defects in fertilized seed), due to blocked removal of cohesin from chromosomes during meiotic prophase (late zygotene/pachytene stage) resulting in chromosome bridges, broken chromosomes and uneven chromosome segregation, and leading to shorter siliques containing fewer seeds; this double mutant restores pollen viablitity to pollen-lethal ctf7 mutation (PubMed:25033056, PubMed:26813623). During mitosis, abnormal chromosome segregation but normal cohesin release (PubMed:25033056).
messages: Regulator of sister chromatid cohesion in meiosis which negatively regulates cohesin association with chromatin, acting as an antagonist of CTF7 (PubMed:25033056, PubMed:26813623). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (By similarity). Essential for the prophase removal of cohesin during meiosis thus determining the timely release of meiotic cohesion (PubMed:25033056). Important for proper spindle attachment and assembly during meiosis (PubMed:25033056). Helps to prevent abnormal centromere association during prophase I in meiocytes (PubMed:25033056). Required for early embryonic patterning (PubMed:25033056). Also involved in chromosome segregation during mitosis (PubMed:25033056).

3702:AT1G02080
gene id: 3702:AT1G02080
uniprot id: A0A1P8ARB7
uniprot id: F4HVV6
uniprot id: F4HVV7
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G53860
gene id: 3702:AT1G53860
uniprot id: A0A1P8AQI2
uniprot id: Q6DBE3
names: Similarity
messages: Belongs to the remorin family.

3702:AT1G29010
gene id: 3702:AT1G29010
uniprot id: Q9SHQ9
names: Function
names: Miscellaneous
names: Subunit
names: Tissue Specificity
messages: Adapter-like transcriptional repressor recruiting TPL/TPR coepressors to inhibit TCP transcription factors (By similarity). May be involved in leaf development.
messages: Expressed in leaves.
messages: Interacts with SPL and SPEAR2.
messages: Knock down expression of SPEAR2/TIE4 and SPEAR4/TIE3 by RNAi in a SPEAR3/TIE1 null mutant produces lines displaying epinastic leaves.

3702:AT5G47120
gene id: 3702:AT5G47120
uniprot id: Q9LD45
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the BI1 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in root tips, root vasculature, flower tissues, including stamens and sepals, and in the base of siliques. Not detected in mature leaves.
messages: Interacts (via C-terminus) with calmodulin, CYTB5-B and CYTB5-D. Interacts indirectly with FAH1 via CYTB5-D.
messages: No visible phenotype under normal growth conditions. Accelerated methyl jasmonate-induced leaf senescence. Enhanced sensitivity to water stress, heat shock, toxin, tunicamycin and pathogens.
messages: Suppressor of apoptosis. Modulator of endoplasmic reticulum stress-mediated programmed cell death. Involved in methyl jasmonate-induced leaf senescence through regulating cytoplasmic calcium level.
messages: Up-regulated by water stress, heat-shock, mycotoxin and pathogens.

3702:AT1G22370
gene id: 3702:AT1G22370
uniprot id: Q9LMF0
uniprot id: W8PVB6
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Expressed in roots, shoots and leaves.

3702:AT1G66560
gene id: 3702:AT1G66560
uniprot id: Q9C557
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group III family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT3G54670
gene id: 3702:AT3G54670
uniprot id: Q6Q1P4
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Altered chromosome dynamics and cell division during seed development, leading to aberrant mitoses and giant polyploid nuclei in endosperm as well as arrested embryos with a few small cells.
messages: Belongs to the SMC family. SMC1 subfamily.
messages: Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex also plays an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity). Essential protein plant viability. Required for chromosome segregation (e.g. sister chromatid alignment) and cell division during embryogenesis.
messages: Chromosome
messages: Cohesin complexes are composed of the SMC1 and SMC3 heterodimer attached via their SMC hinge domain, SCC3, and an alpha-kleisin subunit SCC1 linked to one SYN subunit (SYN1, SYN2, SYN3 or SYN4).
messages: Mostly expressed in flower buds and stems, and, to a lower extent, in leaves and roots.
messages: Nucleus
messages: The flexible SMC hinge domain, which separates the large intramolecular coiled coil regions, allows the heterotypic interaction with the corresponding domain of SMC1A or SMC1B, forming a V-shaped heterodimer. The two heads of the heterodimer are then connected by different ends of the cleavable RAD21 protein, forming a ring structure (By similarity).

3702:AT4G24570
gene id: 3702:AT4G24570
uniprot id: A0A178URN9
uniprot id: Q9SB52
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: By cold stress.
messages: Expressed in roots, leaves, stems and flowers.
messages: Membrane
messages: Mitochondrion inner membrane
messages: PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage (By similarity). Recombinant PUMP4, reconstituted into liposomes, transports a wide range of dicarboxylic acids including malate, oxaloacetate and succinate as well as phosphate, sulfate and thiosulfate. However, it is unknown if these transports are of any biological significance in vivo.

3702:AT4G16730
gene id: 3702:AT4G16730
uniprot id: P0CJ42
names: Caution
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsb subfamily.
messages: By coronalon.
messages: Could be the product of a pseudogene. In strain cv. Columbia, a naturally frameshift at position 65 results in a truncated TPS02 protein. Lacks the conserved active sites, suggesting that it has no terpenoid synthase activity. A complete sequence for TPS02 can be found in strain cv. Wassilewskija (AC P0CJ43).
messages: Expressed exclusively in flowers.
messages: chloroplast

3702:AT1G17760
gene id: 3702:AT1G17760
uniprot id: A0A5S9UZE4
uniprot id: Q8GUP1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer. Belongs to the CSTF complex (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits CPSF30, CSTF64, PCFS1, PCFS5 and FIPS5 (PubMed:12379796, PubMed:16282318, PubMed:18479511, PubMed:18221017, PubMed:20214900).
messages: Impaired antisense-RNA-mediated gene silencing (e.g. suppression of overexpression of FCA-mediated FLC repression). Delayed flowering and female gametophytic lethality.
messages: Nucleus
messages: One of the multiple factors required for polyadenylation and 3'-end cleavage of pre-mRNAs (By similarity). Required for the targeted 3' processing of antisense transcripts that triggers transcriptional silencing of the corresponding sense gene (PubMed:19965720).

3702:AT5G27740
gene id: 3702:AT5G27740
uniprot id: Q8VXX4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the activator 1 small subunits family.
messages: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can form a complex with RFC1.
messages: May be involved in DNA replication and thus regulate cell proliferation.
messages: Nucleus

3702:AT4G12430
gene id: 3702:AT4G12430
uniprot id: Q9SU39
names: Function
names: Induction
names: Similarity
messages: Belongs to the trehalose phosphatase family.
messages: By trehalose.
messages: Participates in the regulation of trehalose metabolism.
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).

3702:AT4G33625
gene id: 3702:AT4G33625
uniprot id: A0A384KXN1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G53570
gene id: 3702:AT3G53570
uniprot id: P51566
names: Function
names: Similarity
messages: Activator of yeast transcription factor, STE12.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. Lammer subfamily.

3702:AT2G40330
gene id: 3702:AT2G40330
uniprot id: A0A178VRV8
uniprot id: Q8S8E3
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Membrane
messages: Monomer (PubMed:21658606). Homodimer. Binds ABA on one subunit only (By similarity). Interacts with HAB1, ABI1 and ABI2, and possibly with other PP2Cs (PubMed:19624469, PubMed:19874541, PubMed:19898420). Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus. Interacts directly with CAR1 and CAR4 (PubMed:25465408). Interacts with MYC2 in the nucleus. Interaction with MYC2 is increased in the presence of abscisic acid (PubMed:27357749).
messages: No visible phenotype under normal growth conditions, but mutant seedlings exhibit increased sensitivity to abscisic acid-induced inhibition of cotyledon expansion. The inhibition effect is more severe with the combination of abscisic acid and jasmonate.
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) in an ABA-independent manner but more efficiently when activated by ABA (PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015). May link ABA and jasmonate signaling pathways by modifying MYC2 transcriptional activity, and regulation of JAZ6 and JAZ8 gene expression by MYC2 (PubMed:27357749).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT3G63150
gene id: 3702:AT3G63150
uniprot id: A0A178VC39
uniprot id: F4J0W4
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by calcium.
messages: Belongs to the mitochondrial Rho GTPase family.
messages: By abscisic acid (ABA) and NaCl.
messages: Calcium-binding mitochondrial GTPase involved in calcium signaling during salt stress response (PubMed:16832621). May play a role in the progression of embryonic cell division, development of haploid male and female gametes, and pollen tube growth (PubMed:21494602).
messages: Expressed roots, rosette and cauline leaves, stems, flowers and siliques.
messages: Membrane
messages: Mitochondrion outer membrane
messages: No visible phenotype under normal growth conditions (PubMed:16832621, PubMed:18344283). Mutant plants show increased sensitivity to ABA, NaCl or mannitol during germination (PubMed:16832621).

3702:AT3G05620
gene id: 3702:AT3G05620
uniprot id: A0A178VCU2
uniprot id: Q9M9W7
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT3G08620
gene id: 3702:AT3G08620
uniprot id: Q8GYR4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G52155
gene id: 3702:AT1G52155
uniprot id: A0A178W3F3
uniprot id: F4IBA7
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G40860
gene id: 3702:AT5G40860
uniprot id: A0A178UMW3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G23630
gene id: 3702:AT5G23630
uniprot id: Q9LT02
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
messages: Endoplasmic reticulum membrane
messages: Highly expressed in root meristem. Expressed in pavement cells of trichomes, stipules, stamens and pollen grains.
messages: Imbalances in cation homeostasis and severe reduction in fertility. Increased inhibition of primary root growth in low inorganic phosphate conditions.
messages: Mediates manganese transport into the endoplasmic reticulum. The ATPase activity is required for cellular manganese homeostasis (By similarity). Plays an important role in pollen and root development through its impact on protein secretion and transport processes. Functions together with LPR1 and LPR2 in a common pathway that adjusts root meristem activity to phosphate availability. Under phosphate limitation, restricts SHR movement in root meristem and is required for maintaining SCR expression in the root meristem stem-cell niche as well as for proximal meristem activity. Can complement the yeast spf1 mutant.

3702:AT1G66220
gene id: 3702:AT1G66220
uniprot id: Q9C7U8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT2G33450
gene id: 3702:AT2G33450
uniprot id: A0A178VYG9
uniprot id: O22795
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL28 family.
messages: Part of the 50S ribosomal subunit.
messages: Seedling lethality. Albino seedlings unable to grow under photoautotrophic conditions.
messages: chloroplast

3702:AT5G64330
gene id: 3702:AT5G64330
uniprot id: A0A178UIP8
uniprot id: A0A1P8BBW9
uniprot id: A0A2H1ZE95
uniprot id: Q9FMF5
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NPH3 family.
messages: Cell membrane
messages: Expressed in hypocotyls, guard cells and mesophyll cells.
messages: Impaired leaf flattening and slight epinasty when grown under blue light.
messages: In the root, up-regulated by red light.
messages: Interacts with PKS1, PKS2, RPT2, PHOT1 and PHOT2 (PubMed:10542152, PubMed:15031408, PubMed:16777956, PubMed:20071603). Subunit of a complex made of CAR6, PHOT1 and RPT3/NPH3 (PubMed:21367967).
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Signal transducer of the phototropic response and photo-induced movements. Involved in the phot1 pathway under low blue light (LBL) fluence rate and in the phot2 pathway under higher fluence rate of blue light (HBL). Necessary for root and hypocotyl phototropisms, but not for the regulation of stomata opening. Not involved in chloroplast accumulation and translocation.
messages: May be due to an intron retention.
messages: Phosphorylated in the dark.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02110
gene id: 3702:AT3G02110
uniprot id: A0A178VL08
uniprot id: Q8L9Y0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Probable carboxypeptidase.
messages: Secreted
messages: Ubiquitous.

3702:AT1G14540
gene id: 3702:AT1G14540
uniprot id: A0A178WND9
uniprot id: Q9LE15
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT3G25770
gene id: 3702:AT3G25770
uniprot id: A0A178VKE4
uniprot id: Q9LS02
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the allene oxide cyclase family.
messages: High local and systemic induction by wounding.
messages: Highly expressed in fully developed leaves.
messages: Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.
messages: The four allene oxide cyclase proteins (AOC1, AOC2, AOC3 and AOC4) are encoded by duplicated genes. They are very similar, and most experiments involving antibodies do not discriminate between the different members.
messages: chloroplast

3702:AT5G01530
gene id: 3702:AT5G01530
uniprot id: A0A384LC70
uniprot id: Q07473
uniprot id: Q0WW97
names: Cofactor
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: Photoregulated by reversible phosphorylation of its threonine residues.
messages: The LHC complex consists of chlorophyll a-b binding proteins.
messages: The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT1G54475
gene id: 3702:AT1G54475
uniprot id: Q9SLI6
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Could be the product of a pseudogene. In strain cv. Columbia, a naturally occurring variation results in the deletion of 35 amino acids in the middle part of the protein. Lacks part of the extracellular leucine-rich repeats that are required for the specificity of the elicitor protein recognition.

3702:AT2G32920
gene id: 3702:AT2G32920
uniprot id: A0A178W2K0
uniprot id: O48773
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.
messages: Belongs to the protein disulfide isomerase family.
messages: By chemically-induced ER stress response.
messages: Endoplasmic reticulum lumen
messages: Widely expressed.

3702:AT5G04430
gene id: 3702:AT5G04430
uniprot id: Q9LZ82
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Cytoplasm
messages: Expressed in leaves, stems and siliques.
messages: Higher accumulation of ToMV in infected leaves.
messages: Negative regulator of tomato mosaic virus (ToMV) multiplication, but has no effect on the multiplication of cucumber mosaic virus (CMV). Limits the spreading of the virus (PubMed:18762309). Isoform BTR1S: binds preferentially and directly to the 5'terminal region of ToMV genomic RNA, and affects the efficiency of translation rather than mRNA stability (PubMed:18762309).
messages: Not induced by ToMV infection.

3702:AT4G21070
gene id: 3702:AT4G21070
uniprot id: Q8RXD4
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By gamma rays treatment.
messages: Enhanced sensitivity to mitomycin C.
messages: Expressed ubiquitously with highest levels in flower buds (PubMed:12582233). Mostly expressed in flowers and siliques, and, to a lower extent, in roots, rosette leaves, inflorescence and young cauline leaves (PubMed:16957774).
messages: Forms heterodimer with BARD1/ROW1.
messages: Nucleus
messages: Plays a role in DNA repair and in cell-cycle control. Required for the repair of DNA double-strand breaks (DSBs), both natural and induced by genotoxic stress, by homologous recombination (HR).

3702:AT2G22370
gene id: 3702:AT2G22370
uniprot id: A0A178VRQ8
uniprot id: Q9SJZ6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 18 family.
messages: Component of the Mediator complex (PubMed:17560376). Interacts with YY1 to suppress disease susceptibility via the repression of genes glutaredoxins GRX480, GRXS13 and thioredoxin TRX-h5. Binds to ABI4 to regulate abscisic acid responses; recruited by ABI4 to ABI5 promoter in the presence of abscisic acid (ABA). Interacts with SUF4 to regulate flowering time; recruited by SUF4 to FLC promoter (PubMed:24451981).
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors (PubMed:22021418, PubMed:24451981). Involved in the regulation of histone H3 lysine tri-methylation (H3K36me3). Associates with the promoter, coding and terminator regions of target genes suggesting its function in transcription initiation, elongation and termination. Multifunctional protein which regulates plant immunity, especially during necrotrophic fungal infection (e.g. B.cinerea and A.brassicicola), flowering time and responses to hormones (e.g. abscisic acid ABA and ethylene) through interactions with distinct transcription factors (PubMed:24451981).
messages: Deregulated expression of glutaredoxins GRX480, GRXS13 and thioredoxin TRX-h5 leading to enhanced susceptibility to fungal infection (e.g. B.cinerea and A.brassicicola). Altered RNA polymerase II occupancy and histone H3 lysine tri-methylation (H3K36me3) of target genes. Insensitivity to abscisic acid (ABA) and to the ethylene precursor 1-aminocyclopropane-1-carboxylic acid (ACC). Delayed flowering.
messages: Nucleus

3702:AT4G28430
gene id: 3702:AT4G28430
uniprot id: Q8LDS3
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3702:AT2G42760
gene id: 3702:AT2G42760
uniprot id: A0A178VYS1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G07470
gene id: 3702:AT1G07470
uniprot id: A0A654E8U8
uniprot id: Q93VP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TFIIA subunit 1 family.
messages: Nucleus

3702:AT4G34135
gene id: 3702:AT4G34135
uniprot id: Q94C57
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Catalyzes the glycosylation of flavonoids from UDP-glucose. Uses a wide range of flavonoid substrates including flavonols (quercetin, kaempferol, isorhamnetin, 3-OH 7,2',4'-MeO-flavone), flavones (luteolin, apigenin), flavanones (naringenin, hesperetin), flavanonols (taxifolin), isoflavones (genistein, daidzein), flavonol glycosides (quercitrin, isoquercitrin, rutin), and chalcones (isoliquiritigenin). Specific for the C-7 position, with a 20-fold lower activity for the C-3 position.
messages: Expressed in roots and flowers.
messages: Not induced by salicylic acid.

3702:AT2G31170
gene id: 3702:AT2G31170
uniprot id: A0A178VWT1
uniprot id: F4IPY2
uniprot id: F4IQQ3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Embryonic lethality when homozygous.
messages: Mitochondrion
messages: Required for female gametophyte development. Is necessary for the fusion of central cell nuclei and programmed cell death (PCD) of the antipodals.
messages: chloroplast

3702:AT5G13350
gene id: 3702:AT5G13350
uniprot id: A0A384L4B7
uniprot id: Q9LYU1
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.

3702:AT1G21710
gene id: 3702:AT1G21710
uniprot id: A0A178WC14
uniprot id: Q9FNY7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the type-1 OGG1 family.
messages: Expressed in stems, roots, rosette and cauline leaves, flowers and seeds.
messages: Expression is induced during seed desiccation and imbibition.
messages: Involved in repair of DNA damaged by oxidation by incising DNA at 8-oxoG residues. Excises 7,8-dihydro-8-oxoguanine and 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine (Fapy) from damaged DNA. Has a beta-lyase activity that nicks DNA 3' to the lesion.
messages: No visible phenotype under normal growth conditions or UV-A irradiation stress.
messages: Nucleus
messages: Transgenic seeds over-expressing OGG1 exhibit enhanced seed longevity associated with reduced DNA damage, enhanced seed tolerance to abiotic stresses and improved germination performance under abiotic stresses.

3702:AT3G10520
gene id: 3702:AT3G10520
uniprot id: A0A384LCX8
uniprot id: O24521
uniprot id: Q0IGL1
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the globin family.
messages: Belongs to the plant globin family.
messages: By low temperature but not by low oxygen levels, dehydration, heat shock, wounding or oxidative stress.
messages: Expressed in rosette leaves but not in roots.
messages: May not function as an oxygen storage or transport protein, but might act as an oxygen sensor or play a role in electron transfer, possibly to a bound oxygen molecule. Has a low affinity for O(2).
messages: Unable to dimerize.

3702:AT1G10070
gene id: 3702:AT1G10070
uniprot id: B9DHH5
uniprot id: Q2V4P2
uniprot id: Q9M439
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Branched-chain amino acids are synthesized in chloroplasts, whereas the degradation takes place in mitochondria.
messages: Converts 2-oxo acids to branched-chain amino acids. Shows activity with L-Leu, L-Ile and L-Val as amino donors and 2-oxoglutarate as an amino acceptor, but no activity for D-isomers of Leu, Ile, Val, Asp, Glu or Ala.
messages: chloroplast

3702:AT1G55260
gene id: 3702:AT1G55260
uniprot id: A0A654ENQ0
uniprot id: F4I082
uniprot id: F4I083
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Increased susceptibility to penetration of the epidermal cell wall by the non-host mildew fungal agent Blumeria graminis f. sp. hordei (Bgh) (PubMed:30102837). Some early aborted seeds and infertile ovules, and increased salt permeability in seeds associated with an increase in unsubstituted fatty acids but a decrease in omega-hydroxy fatty acids in seed coats (PubMed:24460633).
messages: Lipid transfer protein involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition (PubMed:24460633). Contributes to pre-invasive defense against some non-host powdery mildew pathogens by preventing the penetration of the epidermal cell wall by the fungal agents (e.g. Blumeria graminis f. sp. hordei (Bgh)) (PubMed:30102837).
messages: Mainly present in proliferating tissues (PubMed:21558309). In flowers, expressed in stamens, carpels, petals, sepals and pedicels (PubMed:23893219). Accumulates progressively in leaves during aging (PubMed:23893219).
messages: Membrane
messages: Preferentially expressed in the shoot apical meristem and the root meristem (PubMed:21558309). Also present in the ovules and developing embryos (PubMed:21558309). Observed in cotyledons, hypocotyls, flowers, leaves and siliques (PubMed:23893219). Up-regulated in the epidermis of stems (PubMed:16299169).

3702:AT3G23780
gene id: 3702:AT3G23780
uniprot id: A0A178VA17
uniprot id: Q9LK40
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RNA polymerase beta chain family.
messages: Blocked in the perpetuation of CNN, CG and CNG methylation in repeated endogenous DNA. Reduction of heterochromatin association and methylation into chromocenters, coincident with decondensation and losses in cytosine methylation at pericentromeric major repeats such as 5S gene clusters and AtSN1 retroelements during interphase, independently of siRNA accumulation. Altered cell-to-cell movement of siRNA beyond the vasculature. Reduced 35S promoter homology-dependent transcriptional gene silencing (TGS) in transgenic plants.
messages: Component of the RNA polymerase IV and V complexes. Interacts with SSH1, NRPD1 and NRPE1.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Also required for full erasure of methylation when the RNA trigger is withdrawn. Required for intercellular RNA interference (RNAi) leading to systemic post-transcriptional gene silencing. Involved in the maintenance of post-transcriptional RNA silencing. During interphase, mediates siRNA-independent heterochromatin association and methylation into chromocenters and condensation and cytosine methylation at pericentromeric major repeats. Required for complete maintenance of the 35S promoter homology-dependent TGS in transgenic plants and for the initial establishment of DNA methylation.
messages: Mostly expressed in seedlings, flowers and roots, present ubiquitously, except in sperm cells.
messages: Nucleus

3702:AT3G25180
gene id: 3702:AT3G25180
uniprot id: Q9LSF8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By wounding, upon insect feeding, by the fungal elicitor alamethicin and infection with the bacterial pathogen Pseudomonas syringae DC3000 (PubMed:21088219). Induced by the biosynthetic intermediate 8-hydroxy-7-keto-d-cadinene (C234), especially in synergy with the bacterial pathogen P.syringae pv. maculicola (Psm) (PubMed:30967019).
messages: Expressed in stems, flower peduncles, receptacle of developing and mature flowers and in stigma of mature opening flower buds.
messages: Involved in the biosynthesis of homoterpenes, attractants of herbivores parasitoids and predators (e.g. predatory mites and parasitoid wasps) (PubMed:21334702). Catalyzes the conversion of the C20 (E,E)-geranyllinalool to C16-homoterpene 4,8,12-trimethyltrideca-1,3,7,11-tetraene (TMTT) of the C15 (E)-nerolidol to C11-homoterpene (E)-4,8-dimethyl-1,3,7-nonatriene (DMNT); these volatile compounds are produced upon insect herbivore attack and emitted from flowers and vegetative tissues during herbivore feeding (PubMed:21088219). Required during resistance responses to the fungus Alternaria brassicae (PubMed:29271603). Prevents oviposition of the phloem-feeding insect cabbage whitefly (Aleyrodes proletella) (PubMed:26699853).
messages: Membrane
messages: No visible phenotype under normal growth conditions, but loss of TMTT production after alamethicin elicitation (PubMed:21088219). Enhanced susceptibility to the fungus Alternaria brassicae (PubMed:29271603). Increased oviposition rate of the phloem-feeding insect cabbage whitefly (Aleyrodes proletella) (PubMed:26699853).

3702:AT1G55152
gene id: 3702:AT1G55152
uniprot id: A0A178WP03
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G56040
gene id: 3702:AT5G56040
uniprot id: A0A178U8R1
uniprot id: F4K6B8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in floers, pollen grains and stipules (PubMed:23910659, PubMed:27229311). Present in roots (PubMed:27354416, PubMed:27229311).
messages: Phosphorylated and ubiquitinated upon interaction with RGF1, thus leading to activation a subsequent degradation.
messages: Present throughout the root, starting from the transition zone and including transition and elongation zones, but absent from the meristem.
messages: Receptor with a serine/threonine-protein kinase activity (By similarity). Together with SKM1, LRR-rich receptor-like kinase (LRR-RLK) required for male fertility by the perception of CLE43 and CLE45 peptides and the transduction of their promoting action in pollen tubes, especially under relatively high temperature (at 30 degrees Celsius), thus conferring tolerance against high temperature probably through the maintenance of mitochondrial activity (PubMed:23910659). Seems to not be involved in the perception of CLE45 peptide in roots (PubMed:27354416). Together with RGI1, RGI2, RGI3, RGI4 and RGI5, acts as receptor of RGF1, a peptide hormone that maintains the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT) (PubMed:27229312, PubMed:27229311). Links RGF1 signal with its downstream components (PubMed:27229311).
messages: Self-interacts (By similarity). Interacts with RGF1; this interaction triggers its phosphorylation and ubiquitination and the formation of heterodimers with SERK1 (PubMed:27229311).
messages: Slightly induced in pollen upon high-temperature exposure (HTE).
messages: Smaller root meristem size and fewer root meristematic cortex cells, associated with shorter roots and a slighty reduced sensitivity to RGF1 (PubMed:27229311). Insensitivity of pollen tubes to CLE43 and, partially, to CLE45 peptides-mediated growth stimulation (PubMed:23910659). Pollen tubes of plants missing both SKM1 and SKM2 are fully insensitive to CLE45 peptides (PubMed:23910659). Quintuple mutants rgi1 rgi2 rgi3 rgi4 rgi5 display a consistent short primary root phenotype with a small size of meristem associated with a total insensitivity to RGF1 and undetectable levels of PLT1 and PLT2 (PubMed:27229312).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G49540
gene id: 3702:AT5G49540
uniprot id: A0A178UH14
uniprot id: A0A178UIC2
uniprot id: A0A384LG92
uniprot id: Q9AST5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EMC6 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT4G31100
gene id: 3702:AT4G31100
uniprot id: Q9M092
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
messages: The EGF-like region is specific to this family of proteins and seems to consist of the C-terminal of an EGF-like domain fused to the N-terminal of another one.

3702:AT5G61540
gene id: 3702:AT5G61540
uniprot id: A0A178UQ82
uniprot id: A0A178UR38
uniprot id: Q56W64
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
messages: Acts in asparagine catabolism but also in the final steps of protein degradation via hydrolysis of a range of isoaspartyl dipeptides.
messages: Belongs to the Ntn-hydrolase family.
messages: Cleaved into an alpha and beta chain by autocatalysis; this activates the enzyme. The N-terminal residue of the beta subunit is responsible for the nucleophile hydrolase activity (By similarity).
messages: Heterotetramer of two alpha and two beta chains arranged as a dimer of alpha/beta heterodimers.
messages: May be due to intron retention or to a competing acceptor splice site.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G55340
gene id: 3702:AT5G55340
uniprot id: A0A178ULP6
uniprot id: Q9FJ76
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the wax synthase family.
messages: Catalyzes the final step in the synthesis of long-chain linear esters (waxes).
messages: Membrane

3702:AT4G37680
gene id: 3702:AT4G37680
uniprot id: A0A178V859
uniprot id: A0A1P8B728
uniprot id: Q9SZG0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ADIPOR family.
messages: Expressed in roots, leaves, stems and flowers.
messages: May play a role in abiotic stress response.
messages: Membrane

3702:AT3G27380
gene id: 3702:AT3G27380
uniprot id: A0A178VCX3
uniprot id: Q8LBZ7
names: Cofactor
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Binds 1 [3Fe-4S] cluster.
messages: Binds 1 [4Fe-4S] cluster.
messages: Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.
messages: Expressed in floral meristems and sex organ primordia at early stages of development. Later expressed in anthers, particularly in the tapetum, pollen mother cells, and microspores.
messages: Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
messages: Mitochondrion inner membrane
messages: Ubiquitous. Preferentially expressed in flowers and inflorescences.

3702:AT4G15090
gene id: 3702:AT4G15090
uniprot id: Q9SWG3
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FHY3/FAR1 family.
messages: Down-regulated after exposure to far-red light. Subject to a negative feedback regulation by PHYA signaling.
messages: Elongated hypocotyls and reduced expansion of cotyledons under continuous far-red light. Reduced protochlorophyllide levels in darkness and less photobleaching in the light.
messages: Homodimer and heterodimer with FHY3.
messages: Nucleus
messages: The FAR1 domain is involved in direct DNA binding, the SWIM-type zinc finger is essential for transcriptional activation activity and both the MULE and SWIM domains are essential for dimerization.
messages: Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CACGCGC-3'. Activates the expression of FHY1 and FHL involved in light responses. Positive regulator of chlorophyll biosynthesis via the activation of HEMB1 gene expression.

3702:AT5G21920
gene id: 3702:AT5G21920
uniprot id: Q9C595
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YggT family.
messages: No visible phenotype under normal growth conditions.
messages: Not required for the biogenesis and accumulation of native cytochrome b6 in the thylakoid membrane. Not functionally involved in the pathway for covalent binding of the c-type heme to cytochrome b6.
messages: chloroplast thylakoid membrane

3702:AT2G44610
gene id: 3702:AT2G44610
uniprot id: O80501
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Expressed in roots, stems, leaves and flowers.
messages: Golgi apparatus membrane
messages: Interacts with the C-terminus of GC5, but not with GC3.
messages: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER). Binds GTP and GDP and possesses intrinsic GTPase activity (By similarity).
messages: cytosol

3702:AT4G19230
gene id: 3702:AT4G19230
uniprot id: A0A178V0Q6
uniprot id: A8MRX5
uniprot id: Q949P1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By abscisic acid treatment, salt or osmotic stresses, and by dehydration and rehydration. Expression regulated by phytochrome B.
messages: Expressed predominantly during mid-maturation of seed and down-regulated during late maturation. Up-regulated 12 hours after seed imbibition.
messages: Involved in the oxidative degradation of abscisic acid. Plays an important role in determining abscisic acid levels in dry seeds and in the control of postgermination growth.
messages: Mainly expressed in flowers, siliques, roots and stems. Lower expression in rosette leaves and dry seeds. Expressed in vascular tissues of embryo during the seed development.
messages: Membrane
messages: Plants show a reduced germination.

3702:AT2G43390
gene id: 3702:AT2G43390
uniprot id: A0A178VN18
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G42430
gene id: 3702:AT2G42430
uniprot id: Q9SLB7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: By auxin.
messages: During lateral root formation, expressed in the lateral root primordia, and the developing, emerged, and mature lateral roots.
messages: Expressed in roots and faintly in shoots.
messages: Homodimer and heterodimer with LBD18.
messages: Nucleus
messages: Reduced number of lateral roots.
messages: Transcriptional activator (PubMed:19717544, PubMed:22974309). Involved in lateral root formation. Regulated by the transcriptional activators ARF7 and ARF19 (PubMed:17259263). Functions in the initiation and emergence of lateral roots, in conjunction with LBD18, downstream of ARF7 and ARF19 (PubMed:19717544, PubMed:23749813). Acts downstream of the auxin influx carriers AUX1 and LAX1 in the regulation of lateral root initiation and development (PubMed:26059335).

3702:AT1G20780
gene id: 3702:AT1G20780
uniprot id: Q9LM76
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subunit
names: Tissue Specificity
messages: Expressed in leaves, root vasculature and guard cells.
messages: Functions as an E3 ubiquitin-protein ligase. Prevents premature senescence probably by targeting proteins involved in this process for degradation. Promotes the degradation of AAO3 and thus represses abscisic acid (ABA) biosynthesis.
messages: Interacts with AAO3. Binds to SD129.
messages: May be due to a competing acceptor splice site.
messages: Premature senescence under low light conditions accompanied by enhanced ABA biosynthesis, accumulation of AAO3, and reduced photosynthetic capacity.

3702:AT3G57670
gene id: 3702:AT3G57670
uniprot id: A0A178VLW5
uniprot id: Q9SVY1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Can form homodimers. Interacts with BLH9, STM, AGL8/FUL, AGL1/SHP1 and AGL5/SHP2.
messages: Expressed in developing carpels (PubMed:17600712). Expressed in the shoot apical meristem and the replum (PubMed:25039392).
messages: Nucleus
messages: Reduced fertility, fruit length and seed set (PubMed:17600712). Reduced replum width and cell number (PubMed:25039392).
messages: The fruits of the gain-of-function mutant ntt-3D (T-DNA tagging) fail to dehisce.
messages: Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392).

3702:AT4G14716
gene id: 3702:AT4G14716
uniprot id: A0A1P8B4W3
uniprot id: Q0WSS4
uniprot id: Q8GXE2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acireductone dioxygenase (ARD) family.
messages: Binds either 1 Fe or Ni cation per monomer. Iron-binding promotes an acireductone dioxygenase reaction producing 2-keto-4-methylthiobutyrate, while nickel-binding promotes an acireductone dioxygenase reaction producing 3-(methylsulfanyl)propanoate.
messages: Catalyzes 2 different reactions between oxygen and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
messages: Cytoplasm
messages: Nucleus

3702:AT5G41150
gene id: 3702:AT5G41150
uniprot id: Q9LKI5
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the XPF family.
messages: Heterodimer with ERCC1/RAD10.
messages: Inactive.
messages: Isoform 1 and isoform 2 are widely expressed, predominantly in flowers, meristems and stems. Isoform 3 is detected at low levels.
messages: Nucleus
messages: Seems to be involved in nucleotide excision repair (NER) of damaged DNA (dark repair mechanism). Involved in repair of UV light, and probably oxidative damage. The UVH1/RAD1-ERCC1/RAD10 complex may act as an endonuclease making DNA incision 5' to the lesion site. In vitro, is implicated in double strand breaks (DSBs) repair and is required for homologous recombination in the presence of non-homologous overhangs. May mediate the induction of a DNA-damage sensitive cell-cycle checkpoint during the G2 phase.

3702:AT1G30710
gene id: 3702:AT1G30710
uniprot id: A0A5S9WHN6
uniprot id: Q9SA86
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in cell walls of etiolated hypocotyls.
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT4G15620
gene id: 3702:AT4G15620
uniprot id: A0A178V4A8
uniprot id: O23413
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT2G36740
gene id: 3702:AT2G36740
uniprot id: A0A1P8AZV3
uniprot id: A0A5S9X4Q4
uniprot id: F4IP06
names: Function
names: Similarity
names: Subunit
messages: Belongs to the VPS72/YL1 family.
messages: Component of the SWR1 chromatin-remodeling complex composed of at least ARP6/ESD1/SUF3, PIE1, SWC6, SWC2 and H2AZs (HTA8, HTA9, HTA11). Interacts directly with SWC6 and H2AZs, but not with ARP6.
messages: Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling.

3702:AT1G54350
gene id: 3702:AT1G54350
uniprot id: Q6NLC1
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. ABCD family. Peroxisomal fatty acyl CoA transporter (TC 3.A.1.203) subfamily.
messages: Homodimer or heterodimer.
messages: Membrane
messages: chloroplast

3702:AT5G42100
gene id: 3702:AT5G42100
uniprot id: A0A5S9YAQ9
uniprot id: F4K020
uniprot id: Q9FHX5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 17 family.
messages: By infection with the cucumber mosaic virus (CMV).
messages: Cell membrane
messages: Highly expressed in flowers and siliques.
messages: Plasmodesmal-associated membrane beta-1,3-glucanase involved in plasmodesmal callose degradation and functions in the gating of plasmodesmata.
messages: plasmodesma

3702:AT1G13190
gene id: 3702:AT1G13190
uniprot id: A0A178WEB9
uniprot id: Q9SAF2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRM CPSF6/7 family.
messages: Nucleus

3702:AT5G15660
gene id: 3702:AT5G15660
uniprot id: A0A178UD40
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G45060
gene id: 3702:AT5G45060
uniprot id: Q9FHF0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the disease resistance TIR-NB-LRR family.
messages: Disease resistance (R) protein that specifically recognizes the AvrRps4 type III effector avirulence protein from P.syringae. Heterodimerization with RRS1B is required to form a functional complex to recognize AvrRps4 and to mediate the hypersensitive response.
messages: Interacts with RRS1B. RPS4B-RRS1B heterodimer interacts with the bacterial effectors AvrRps4 and PopP2.
messages: Nucleus
messages: The TIR domain is a signaling domain involved in cell death induction. It is involved in heterodimerization of RPS4B with RRS1B, but other domains also contribute to the interaction.
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT1G64990
gene id: 3702:AT1G64990
uniprot id: A0A654EWS4
uniprot id: Q9XIP7
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abscisic acid receptor. The GDP-bound form exhibits greater abscisic acid binding than the GTP-bound form (PubMed:19135895). Required for seedling growth and fertility (PubMed:23001037).
messages: Belongs to the Golgi pH regulator (TC 1.A.38) family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Expressed in cotyledons, leaves, stems, roots, flowers and guard cells.
messages: Golgi apparatus membrane
messages: Has both a topology similar to GPCRs and a GTP-binding/GTPase activity.
messages: Interacts with GPA1.
messages: Membrane
messages: No visible phenotype; due to the redundancy with GTG2. The double mutants gtg1 and gtg2 are hyposensitive to abscisic acid.
messages: Not induced by abscisic acid, cold, salt or drought treatments.
messages: The GTPase activity is Mg(2+) dependent and is strongly inhibited by the interaction with GPA1.

3702:AT1G25510
gene id: 3702:AT1G25510
uniprot id: Q9C6M0
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G09400
gene id: 3702:AT1G09400
uniprot id: A0A1P8AT55
uniprot id: A0A654E973
uniprot id: Q8GYA3
names: Function
names: Similarity
messages: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.
messages: Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

3702:AT4G01850
gene id: 3702:AT4G01850
uniprot id: A0A178V3V9
uniprot id: P17562
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate (By similarity).
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate (By similarity). Can utilize magnesium, manganese or cobalt (in vitro) (By similarity).
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.
messages: Cytoplasm
messages: Highly expressed in stems and roots (PubMed:2482229). Detected in trichomes (at the protein level) (PubMed:15276459).
messages: Homotetramer (By similarity). Interacts with GRF3.
messages: Inhibited by 5,5'-dithiobis-2-nitrobenzoic acid (DTNB) and N-ethylmaleimide (NEM) (in vitro).

3702:AT1G44000
gene id: 3702:AT1G44000
uniprot id: A0A654EL56
uniprot id: Q94AQ9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the staygreen family.
messages: Down-regulated during natural and dark-induced leaf senescence.
messages: Expressed in cotyledons, pollen and young leaves.
messages: Interacts with the light harvesting complex II (LHCII) (PubMed:25261252). Interacts with the chlorophyll catabolic enzymes (CCEs) NYC1, NOL, PAO and RCCR (PubMed:25261252).
messages: Magnesium chelatase involved in chlorophyll a degradation in the chlorophyll-protein complexes of photosystem I (PSI) and photosystem II (PSII) (PubMed:27604697). Contributes to the degradation of PSI and PSII in the thylakoid membranes (PubMed:27604697). Recombinant SGRL possesses high dechelating activity against chlorophyllide a, very low activity against chlorophyll a, and no activity against chlorophyll b (PubMed:27604697). Contributes to abiotic stress-induced chlorophyll degradation and leaf yellowing during vegetative plant growth (PubMed:25261252).
messages: chloroplast thylakoid

3702:AT3G63410
gene id: 3702:AT3G63410
uniprot id: A0A178VHS6
uniprot id: Q9LY74
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.
messages: Involved in a key methylation step in both tocopherols (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone (MPBQ) to 2,3-dimethyl-6-phytyl-1,4-hydroquinone (DMPQ, a substrate for tocopherol cyclase), and 2-methyl-6-solanyl-1,4-benzoquinone (MSBQ) to plastoquinone.
messages: Pale green seedlings that are lethal when grown on normal conditions.
messages: chloroplast inner membrane

3702:AT2G36840
gene id: 3702:AT2G36840
uniprot id: A0A5S9X4L4
uniprot id: Q9SJM1
names: Function
messages: Binds amino acids.
messages: May bind amino acids.

3702:AT4G30860
gene id: 3702:AT4G30860
uniprot id: A0A178UX33
uniprot id: Q949T8
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
messages: Chromosome
messages: Expressed in roots, flowers and buds, the anther and in stamen filaments.
messages: First observed at low levels in the vasculature and around hydathodes of developing leaves. In flowers, restricted to anthers tapetum at a post-meiosis stage, to filaments, and to microspores during their development. Disappears as pollen matures. In developing roots, expressed throughout the lower part, in the cap, in the epidermis and in non-epidermal tissue in the division and elongation zone. Also detected in cells lining lateral root formation.
messages: Histone methyltransferase (By similarity). Involved in stamen development.
messages: Interacts with AMS/bHLH21 by its SET domain and PHD finger.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G57880
gene id: 3702:AT5G57880
uniprot id: F4KDF5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Defective in early recombination processes leading to the absence of meiotic DNA double-strand break (DSB) formation (PubMed:19763177). Reduced silique elongation associated with fertility defects involving both male and female gametophyte abortion due to aberrant meiotic products (PubMed:19763177, PubMed:19500302). Produced multiple uneven spores aborted in later stages during anther development, due to abnormal chromosome segregation and unequal bipolar or multipolar spindles in meiocytes (PubMed:19500302).
messages: Expressed in roots, stems, leaves, inflorescences and seedlings. Strongly expressed in meiocytes.
messages: In anthers, predominantly detected in meiocytes and tapetal cells from stage 5 to early stage 7, with highest levels at stage 6, the time of male meiosis. In ovules, present in female meiocytes and embryo sacs.
messages: Involved in meiotic spindle organization in meiocytes thus regulating chromosome segregation (PubMed:19500302). Required for formation of meiotic DNA double-strand breaks (DSBs) during early recombination processes (PubMed:19763177).
messages: Nucleus
messages: spindle

3702:AT3G18485
gene id: 3702:AT3G18485
uniprot id: F4J8R4
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Recessive resistance to auxin conjugates indole-3-acetic acid-leucine (IAA-Leu) and IAA-Phe, but normal sensitivity to free IAA. Defective in lateral root formation and primary root elongation. Resistant to manganese- and cobalt-mediated inhibition of root elongation probably due to an enhanced ATP-dependent manganese transport.
messages: Regulates an ATP-dependent metal transporter (e.g. manganese transporter). Probably involved in the metabolism of auxin conjugates such as indole-3-acetic acid-leucine (IAA-Leu) and IAA-Phe. Required for root development.

3702:AT5G54225
gene id: 3702:AT5G54225
uniprot id: P82792
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G60620
gene id: 3702:AT5G60620
uniprot id: A0A178UCY8
uniprot id: Q8GWG0
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
messages: Endoplasmic reticulum membrane
messages: Essential protein. Required for male and female gametophytes development (PubMed:26586834). Exhibits sn-1 acyltransferase activity with high specificity for acyl-coenzyme A, thus triggering storage lipid biosynthesis and playing an important role in the Kennedy pathway of glycerolipid biosynthesis (PubMed:27325892). Catalyzes triacylglycerol (TAG) accumulation involved in membrane lipid and oil biosynthesis, especially in seeds (PubMed:26586834, PubMed:27325892). Contributes also to the biosynthesis of both polar lipids and TAG in developing leaves, as well as lipid droplet production in developing pollen grains. Seems to not contribute to surface lipid biosynthesis (e.g. waxes and cutin) (PubMed:27325892).
messages: Homozygous lethal. Male (pollen) and female gametophytic lethality. Reduces oil content and altered fatty acids (FA) composition.
messages: Self-interacts. Interacts with LPAT2 and LPCAT2.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: Up-regulated during embryogenesis (PubMed:19539490, PubMed:27325892). Expressed in seedlings, leaves, stems, roots, floral buds, flowers, pollen, and siliques at various developmental stages (PubMed:27325892).
messages: Within siliques, accumulates strongly in developing embryos in the mid-stages of embryo development, during the time of abundant glycerolipid biosynthesis. In stems, confined to phloem and xylem. In flowers, mostly restricted to anthers (and more specifically pollen), and barely in sepals and petals.

3702:AT2G25185
gene id: 3702:AT2G25185
uniprot id: Q2V459
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Contains 6 disulfide bonds instead of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT2G01090
gene id: 3702:AT2G01090
uniprot id: A0A5S9WW86
uniprot id: Q9SJV7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UQCRH/QCR6 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (Probable). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Mitochondrion inner membrane

3702:AT4G14276
gene id: 3702:AT4G14276
uniprot id: A0A178V5Y5
uniprot id: P0CAX9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G43100
gene id: 3702:AT1G43100
uniprot id: Q9C8C2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G10720
gene id: 3702:AT4G10720
uniprot id: Q4V397
uniprot id: Q56XJ1
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G27810
gene id: 3702:AT3G27810
uniprot id: A0A178VHJ7
uniprot id: A0A1I9LPZ0
uniprot id: Q9LK95
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts (via N-terminus) with TIFY10A/JAZ1, TIFY5A/JAZ8 AND TIFY3A/JAZ11.
messages: Mainly expressed in floral tissues. expressed in all four whorls of the flower, in the anther vascular tissue and in cells at the junction between anther and stamen filaments. Detected in the nectaries and ovules.
messages: Nucleus
messages: Probably ubiquitinated by COP1. Ubiquitination takes place in darkness and leads to its subsequent degradation, thereby preventing to activate photomorphogenesis signals (Probable).
messages: Short anther filaments, delayed anther dehiscence and greatly reduced male fertility. Myb21 and myb24 double mutant is more severely sterile than myb21 mutant and has petals that just grew out of the sepals but ended at a lower level than the stigma. Myb21 and myb57 double mutant has an intermediate sterility phenotype and petals that grew to a final height parallel to the pistil. Myb21, myb24 and myb57 triple mutant has a strongly reduced fertility and an arrested growth of the petals that never grew out of the sepals.
messages: Transcription factor involved in photomorphogenesis in the light. May act downstream of the light receptor network and directly affects transcription of light-induced genes. In darkness, its probable degradation prevent the activation of light-induced genes. Required to activate expression of PAL. Acts redundantly with MYB24 and MYB57 to control stamen filament elongation in the late developed flowers. Contributes with MYB24 to induction of MYB108 by jasmonate. Repressed at the transcript levels by DELLA proteins.
messages: Up-regulated by jasmonate.

3702:AT1G51220
gene id: 3702:AT1G51220
uniprot id: A0A178WMC8
uniprot id: Q8W031
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Nucleus
messages: Probable transcriptional regulator.

3702:AT5G18080
gene id: 3702:AT5G18080
uniprot id: A0A178UNU5
uniprot id: Q9FK62
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARG7 family.
messages: By auxin.
messages: Cell membrane
messages: Functions as positive effectors of cell expansion through modulation of auxin transport.

3702:AT3G55515
gene id: 3702:AT3G55515
uniprot id: A0A384L266
uniprot id: Q6IM93
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G27140
gene id: 3702:AT3G27140
uniprot id: Q3EAZ3
names: Caution
names: Similarity
messages: Although related to the protein phosphatase 2C family, lacks some of the conserved residues that bind manganese, suggesting it has no phosphatase activity.
messages: Belongs to the PP2C family.
messages: Could be the product of a pseudogene.

3702:AT1G68720
gene id: 3702:AT1G68720
uniprot id: Q9S7I0
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Deaminates adenosines to inosines in tRNA-Arg(ACG). Exclusively involved in A-to-I editing of the prokaryote-type chloroplast-tRNA and not involved in C-to-U editing.
messages: Homodimer.
messages: Loss of cp-tRNA editing, decreased chloroplast translation and impaired photosynthesis.
messages: Since the absence of A-to-I editing is compatible with plant survival, a limitted two out of three codon recognition occurs in chloroplasts, though this mechanism is less efficient than wobble pairing.
messages: The C-terminus (843-1307) is sufficient for the deamination.
messages: chloroplast

3702:AT1G16870
gene id: 3702:AT1G16870
uniprot id: A0A654EAI6
uniprot id: Q8W4K2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mS29 family.
messages: Mitochondrion

3702:AT3G03050
gene id: 3702:AT3G03050
uniprot id: A0A384LKM5
uniprot id: Q9M9M4
uniprot id: W8Q6V3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Preferentially expressed in root hair cells. Expressed in roots, leaves, stems, flowers and siliques.
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall. Required for synthesis of a cell wall polysaccharide essential for root hair elongation, but not initiation. May be the functional ortholog of rice CSLD1.

3702:AT1G72810
gene id: 3702:AT1G72810
uniprot id: A0A178WMN0
uniprot id: Q9SSP5
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by S-adenosyl-methionine (SAM).
messages: Belongs to the threonine synthase family.
messages: Binds 4 S-adenosyl-L-methionine (SAM) molecules per dimer. Although SAM3 and SAM4 have equivalent positions, their interactions with the protein are not identical. SAM3 interacts with Lys-172 and Asn-178 of monomer B, whereas SAM4 interacts only with Lys-172 of monomer A (By similarity).
messages: Catalyzes the gamma-elimination of phosphate from L-phosphohomoserine and the beta-addition of water to produce L-threonine.
messages: Homodimer.
messages: Much less active than TS1 at physiological concentrations of S-adenosyl-methionine (20 uM).
messages: chloroplast

3702:AT2G37678
gene id: 3702:AT2G37678
uniprot id: Q8S4Q6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in young seedlings with a peak three days after seed germination (PubMed:11726703). Mostly abundant in young seedlings grown in darkness, but quickly down-regulated during further seedling development and by light exposure (at protein level) (PubMed:16244150).
messages: Activated by FHY3 and FAR1 under far-red light (FR); HY5 prevents this activation (PubMed:16045472, PubMed:21097709, PubMed:18033885). Down-regulated by FR, red (R) and blue (B) lights (PubMed:18033885, PubMed:16045472). Accumulates in dark (D)-grown but not in R and FR-grown hypocotyl cells. Repressed in etiolated plants transferred to FR conditions in a FHY3-dependent manner (PubMed:15469493, PubMed:11711433). Inhibited by light (PubMed:11726703). Repressed by PHYA-mediated phosphorylation in R illumination; the phosphorylated form is a substrate for ubiquitin/proteasome-mediated degradation (PubMed:22582101, PubMed:19208901). PHYA-dependent down-regulation by light is largely at post-transcriptional level, primarily mediated through the 26S proteasome-dependent protein degradation (PubMed:16244150).
messages: Belongs to the FHY1 protein family.
messages: Cytoplasm
messages: Expressed in hypocotyl cells of etiolated plants.
messages: Homodimer and heterodimer with FHL (PubMed:16045472). Interacts with underphosphorylated PHYA, especially upon far-red (FR) light illumination (PubMed:19208901, PubMed:18722184, PubMed:21884939, PubMed:19482971). Binds to LAF1 and HFR1. Forms PHYA/FHY1/HFR1 complex in darkness but dissociates from PHYA and HFR1 in response to continuous FR light (FRc) (PubMed:19482971).
messages: Inactivated by rapid reversible PHYA-mediated phosphorylation at Ser-39 and Thr-61 in red light (R), thus inhibiting PHYA signaling in a negative feedback loop; this ensures the seedling deetiolation process in response to a R-enriched light condition (PubMed:19208901, PubMed:22582101). Subsequent exposure to far-red light (FR) after the R conditions leads to dephosphorylation (PubMed:19208901). The phosphorylated form is cytoplasmic only and unable to bind to chromatin at direct target genes whereas the unphosphorylated form can shuttle from cytoplasm to nucleus (PubMed:22582101).
messages: Key regulator of far red / red (FR/R) spectrum-specific responses essential for the adaption to changing light conditions (e.g. de-etiolation), essentially by regulating PHYA shuttling from the cytoplasm to the nucleus and by directly regulating the expression of some target genes, depending on light conditions and phosphorylation status (PubMed:22582101). Binds chromatin at target genes promoters, especially in FR light conditions (PubMed:25071219). Can activate transcription of different genes, some being in a phytochrome A (PHYA)-dependent and other in a PHYA-independent manners (PubMed:15469493, PubMed:11726703, PubMed:25071219). Controls specific aspects of plant development, such as the inhibition of seed germination under FR during salt stress (PubMed:25071219). Essential for light-regulated PHYA nuclear accumulation and subsequent PHYA phototropic signaling processes involved in photomorphogenesis (PubMed:17566111, PubMed:21969386, PubMed:25071219, PubMed:22374392, PubMed:19482971). Mediates the association of PHYA with HFR1 and LAF1 in the nucleus in response to FR conditions (PubMed:19482971). PHYA-specific signal transducer in response to continuous FR lights (PubMed:15469493, PubMed:16045472, PubMed:19482971, PubMed:11711433, PubMed:11726703, PubMed:8364355). Contributes to inhibition of hypocotyl elongation in continuous blue light (B) (PubMed:16045472).
messages: Nucleus
messages: Partially blind to far-red (FR) (PubMed:15469493, PubMed:11711433, PubMed:11726703, PubMed:19482971, PubMed:16045472). Impaired inhibition of hypocotyl elongation and cotyledons expansion under continuous FR light conditions (PubMed:11711433, PubMed:11726703, PubMed:8364355, PubMed:22582101, PubMed:19482971, PubMed:16045472). Absence of FR-induced killing response (PubMed:11726703). Increased seed germination rate in salt stress conditions (PubMed:25071219). In plants lacking FHY1 and FHL, altered phototropism (e.g. phototropic bending) associated with abnormal consitutive cytosolic localization of PHYA (PubMed:22374392, PubMed:17566111). In the double mutant fhl fhy1 several PHYA-dependent phototropic responses are altered (e.g. hypocotyl elongation and cotyledon opening under high-irradiance conditions and seed germination under very-low-fluence conditions), but not for some PHYA-dependent responses such as the abrogation of negative gravitropism in blue light and red-enhanced phototropism (PubMed:17566111). Hyposensitivity to blue light (B) (PubMed:16045472).

3702:AT4G36950
gene id: 3702:AT4G36950
uniprot id: A0A178V4X4
uniprot id: Q6K1M3
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT2G44500
gene id: 3702:AT2G44500
uniprot id: A0A178VR66
uniprot id: O64884
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase GT106 family.
messages: Golgi apparatus membrane
messages: Highly expressed in shoot apical meristem (SAM) and in young vegetative tissues.
messages: Increased number of lateral roots and wider stem diameter. Altered cell wall composition with an increased level of de-esterified pectins.
messages: Interacts with RACK1A.
messages: May play a role in the biosynthesis of matrix polysaccharides and contribute to the biomechanics and development of the plant cell wall.

3702:AT5G35910
gene id: 3702:AT5G35910
uniprot id: A9LLI7
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Acts as an important epigenetic regulator through multiple silencing mechanisms (PubMed:23555312, PubMed:25211139). Involved in association with RRP6L1 in the silencing of the solo LTR locus. Controls levels of non-coding RNAs (ncRNAs) from the solo LTR locus. Seems to function independently of the RNA-mediated gene silencing (RdDM) pathway (PubMed:23555312). Functions redundantly with RRP6L1 in the regulation of FLC locus. Participates in the maintenance of trimethylated 'Lys-27' (H3K27me3) at FLC locus via the regulation of antisense long non-coding RNAs (lncRNAs) and the regulation of diverse antisense RNAs derived from the FLC locus. Seems not involved in the exosomal RNA degradation (PubMed:25211139). May be involved in poly(A)-mediated RNA degradation (PubMed:18285452).
messages: Cytoplasm
messages: No visible phenotype under normal growth conditions (PubMed:18285452, PubMed:25211139). The double mutants rrp6l1 and rrp6l2 have a late flowering phenotype (PubMed:25211139).
messages: Nucleus
messages: nucleolus

3702:AT2G32410
gene id: 3702:AT2G32410
uniprot id: A0A5S9X394
uniprot id: Q9ZV69
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
messages: Heterodimer of ECR1 and AXL1. The complex binds to RUB1/NEDD8 and RCE1.
messages: Nucleus
messages: Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1.
messages: Regulatory subunit of the dimeric ECR1-AXL1 E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1 (Probable). May function redundantly with AXR1 in the RUB conjugating pathway (PubMed:17655650). Seems not to be functionally equivalent to AXR1 in vivo (PubMed:21311953).

3702:AT5G11230
gene id: 3702:AT5G11230
uniprot id: A0A178UPI4
uniprot id: A0A384LJN0
uniprot id: Q9LFN3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT5G52210
gene id: 3702:AT5G52210
uniprot id: A0A178UPG8
uniprot id: Q38921
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3702:AT5G09400
gene id: 3702:AT5G09400
uniprot id: A0A178U6M7
uniprot id: Q9FY75
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Membrane
messages: Potassium transporter.
messages: Probable potassium transporter.

3702:AT5G35610
gene id: 3702:AT5G35610
uniprot id: Q9FJS7
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G57815
gene id: 3702:AT5G57815
uniprot id: A0A178UHL9
uniprot id: Q945L0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome c oxidase subunit 6B (TC 3.D.4.8) family.
messages: Belongs to the cytochrome c oxidase subunit 6B.
messages: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation.
messages: Mitochondrion
messages: Specifically expressed in roots.
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. This protein may be one of the heme-binding subunits of the oxidase.

3702:AT4G37830
gene id: 3702:AT4G37830
uniprot id: Q9T070
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 6A (TC 3.D.4.11) family.
messages: Mitochondrion inner membrane
messages: This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.

3702:AT4G37710
gene id: 3702:AT4G37710
uniprot id: Q9SZG3
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: May function as negative regulator of flowering transition.
messages: Nucleus
messages: Plants over-expressing VQ29 have delayed flowering.

3702:AT3G15380
gene id: 3702:AT3G15380
uniprot id: A0A178VKI5
uniprot id: Q94AN2
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: (Microbial infection) Required for PD localization of MP17, the luteoviral movement protein.
messages: Belongs to the CTL (choline transporter-like) family.
messages: Cell membrane
messages: Choline transporter.
messages: Early endosome membrane
messages: Expressed in both roots and shoots.
messages: Impaired plasmodesmata (PD) mediated cell-to-cell communication (PubMed:29284002). Altered choline metabolite profile. Several phenotypic abnormalities (e.g. dwarf with defects in both shoot and root architecture), including reduced pore density and altered pore structure in the sieve areas, associated with defective symplastic transport through phloem. Increased number of sieve elements (SE)-like cells instead of two companion cells (CCs) and two SEs. Defects in procambium maintenance and phloem patterning. Abnormal retaining of desmotubules in the symplastic space in sieve pores (PubMed:25008948). In cher1-4, impaired secondary plasmodesmata (PD) formation and development leading to starch and soluble sugars excess accumulation, and stunted growth. Altered PD localization of the luteoviral movement protein MP17. Reduced level of choline and phosphocholine (PubMed:27743414). Altered ion profile due to both PD defects and ion transporter misregulation. Increased leaf concentrations of sodium (Na), lithium (Li), boron (B) ions, and decreased leaf concentrations of phosphorus (P), potassium (K), calcium (Ca), cobalt (Co), nickel (Ni), and copper (Cu), manganese (Mn), iron (Fe), zinc (Zn) and molybdenum (Mo) ions. Defects in leaf and root elongation as well as fewer leaves are also observed, associated with irregular cell organization in roots, probably as a result of irregular cell division (PubMed:29284002). Impaired intracellular trafficking of PIN-type auxin transporters (e.g. PIN1 and PIN3) to the plasma membrane, resulting in abnormal seedling growth, lack of apical dominance, cell elongation defect and apical hook development. Perturbated membrane lipids (e.g. phospholipids and sphingolipids) homeostasis. Reduced sensitivity to auxin (e.g. 1-naphthylacetic acid, NAA) (PubMed:29283991).
messages: In roots, observed in all cells of the root tip, inculding both meristem and elongation zones, but restricted to vascular tissues of the maturation zone (PubMed:29284002, PubMed:29283991). Also observed in shoot apical meristems, lateral root primordia and the vascular system. Under dark conditions, present in the concave side of the apical hook (PubMed:29283991).
messages: Membrane
messages: Prevacuolar compartment membrane
messages: Regulator of vesicle trafficking, including endocytosis. Necessary for secondary plasmodesmata (PD) formation and development via the secretory trafficking regulation of proteins required for PD development, thus influencing intercellular communication (PubMed:27743414, PubMed:29284002). Modulates ion homeostasis, especially in roots, by monitoring the transport and subsequent subcellular localization of some ion transporters (PubMed:29284002). Choline transporter involved in the regulation of choline metabolite homeostasis during root and phloem development (PubMed:25008948). Modulates phloem morphogenesis and conductivity (PubMed:25008948). Required for procambium maintenance and sieve plate development (e.g. sieve plate and sieve pore elaboration) to mediate long-distance cell-to-cell communication via symplastic transport through the phloem (PubMed:25008948). Involved in the regulation of intracellular trafficking of PIN-type auxin transporters (e.g. PIN1 and PIN3), a process controlling seedling growth, apical dominance, cell elongation and apical hook development. Modulates also membrane lipids (e.g. phospholipids and sphingolipids) homeostasis (PubMed:29283991).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: phragmoplast
messages: trans-Golgi network membrane

3702:AT3G56970
gene id: 3702:AT3G56970
uniprot id: Q9M1K1
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Homodimer.
messages: Induced by OBP3, auxin and salicylic acid (SA). Repressed by jasmonic acid (JA), UV LIGHT, and heat treatments. Up regulated by iron deficiency in roots and leaves, as well as by nickel, high zinc or high copper treatments. Repressed by high iron, low copper and low zinc treatments.
messages: Nucleus
messages: Roots.

3702:AT1G07790
gene id: 3702:AT1G07790
uniprot id: Q9LQQ4
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK6ac, H2BK33ac and H2BK34ac.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Mono-, di- or trimethylated at the N-terminus to form H2BA1me1/2/3. H2BA1me2 may be acetylated to form H2BA1me2K6ac.
messages: Monoubiquitinated by BRE1 to form H2BK143ub1 and deubiquitinated by UBP26. Required for heterochromatic histone H3 di- and trimethylation at H3K4me. May give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA. Interacts with AHL27.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BA1me1/2/3 = mono-, di- and trimethylated Ala-2; H2BK6ac = acetylated Lys-7; H2BK33ac = acetylated Lys-39; H2BK34ac = acetylated Lys-40; H2BK143ub1 = monoubiquitinated Lys-144.

3702:AT1G55720
gene id: 3702:AT1G55720
uniprot id: Q9LFZ8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/proton exchanger (CAX) subfamily.
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase (By similarity).
messages: Vacuole membrane

3702:AT1G10620
gene id: 3702:AT1G10620
uniprot id: A0A178W8M0
uniprot id: Q9SGY7
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Mostly expressed in flower buds.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G25737
gene id: 3702:AT2G25737
uniprot id: A0A1P8B1L3
uniprot id: A0A654EXR3
uniprot id: Q8L7A0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Membrane

3702:AT5G27700
gene id: 3702:AT5G27700
uniprot id: A0A178UBS9
uniprot id: Q3E902
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS21 family.

3702:AT5G47390
gene id: 3702:AT5G47390
uniprot id: Q9LVS0
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 'Kuoda' means 'enlarge' or 'expand' in Chinese.
messages: Accumulates during leaf expansion. First observed at the tip of the leaves 12 days after sowing (DAS). At 14 DAS, expressed throughout the leaf blade to fade out thereafter in a basipetal manner. In mature leaves, detected in vascular tissue, especially in companion cells (PubMed:24806884). Accumulates to higher levels in old rosette leaves than in young rosette and cauline leaves (PubMed:25920996).
messages: Contains a R/KLFGV repression motif, which may be involved in the activity of transcriptional repression.
messages: Defects in root growth. No visible hypocotyl phenotypes. Increased sensitivity to the gibberellic acid (GA) biosynthesis inhibitor paclobutrazol (PAC) and auxin (IAA) that inhibit hypocotyl elongation (PubMed:23888064). Reduced leaf size due to impaired cell expansion associated with an enhanced expression of peroxidase (Prxs) genes. This phenotype is reversed by SHAM treatment, a peroxidase inhibitor. Increased accumulation of H(2)O(2) (PubMed:24806884). Delayed senescence. Enhanced auxin-responsive gene expression (PubMed:25920996).
messages: Expressed ubiquitously, except in hypocotyls, root tips and lateral root primordia.
messages: Nucleus
messages: Slightly induced by CdCl(2) (PubMed:16463103). Accumulates in the dark (PubMed:23888064, PubMed:25920996). Diurnal expression pattern with maximal levels in the morning (at protein level). Specifically induced during leaf expansion (PubMed:24806884). Expressed in old and dark-treated leaves (PubMed:25920996).
messages: Transcriptional repressor (PubMed:23888064, PubMed:24806884). Direct regulator of the transcription of peroxidase (Prxs) and reactive oxygen species (ROS)-related genes via the recognition of 5'-ATCACA-3' motif (PubMed:24806884). Binds to 5'-TATCCA-3' motif (TA box) and represses the activity of corresponding promoters (e.g. sugar response genes) (PubMed:25920996). Regulates hypocotyl elongation in response to darkness by enhancing auxin accumulation in a phytochrome-interacting factor (PIF) proteins-dependent manner. Promotes lateral roots formation (PubMed:23888064). Promotes cell expansion during leaves development via the modulation of cell wall-located Prxs (PubMed:24806884). Plays a critical role in developmentally regulated and dark-induced onset of leaf senescence by repressing the transcription of several genes involved in chloroplast function and responses to light and auxin. Promotes responses to auxin, abscisic acid (ABA), and ethylene (PubMed:25920996).

3702:AT1G23935
gene id: 3702:AT1G23935
uniprot id: A0A1P8AN36
uniprot id: A0A1P8AN37
uniprot id: F4I7P0
names: Similarity
messages: Belongs to the API5 family.

3702:AT2G06530
gene id: 3702:AT2G06530
uniprot id: Q9SKI2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF7 family.
messages: Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity).
messages: Component of the endosomal sorting required for transport complex III (ESCRT-III), composed at least of VPS2, VPS20, VPS24 and VPS32 (By similarity). Interacts with SKD1 (PubMed:21810997, PubMed:24812106).
messages: Endosome

3702:AT5G09440
gene id: 3702:AT5G09440
uniprot id: A0A178UJ96
uniprot id: Q9FY71
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EXORDIUM family.
messages: May play a role in a brassinosteroid-dependent regulation of growth and development.
messages: Secreted
messages: apoplast
messages: extracellular space

3702:AT5G23870
gene id: 3702:AT5G23870
uniprot id: B9DFR3
uniprot id: F4KEB8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pectinacetylesterase family.
messages: Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties.
messages: Reduced inflorescence stem growth and increased levels of acetate in rosette leaves.
messages: cell wall

3702:AT4G19640
gene id: 3702:AT4G19640
uniprot id: Q9SN68
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by VPS9A.
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Cytoplasm
messages: Early endosome membrane
messages: Endosomal protein that may be involved in endocytosis (PubMed:16103374). Involved in the trafficking of proteins from prevacuolar compartments (PVCs) to vacuoles (PubMed:23682115, PubMed:24824487). May activate the MON1-CCZ1 complex which acts as guanine nucleotide exchange factors (GEF) for Rab7 protein family, and serves as a link between Rab5 and Rab7 families in PVCs, and mediates PVC maturation (PubMed:24824487). Involved in vacuolar transport of storage proteins with EREX as effector. Regulates membrane trafficking to protein storage vacuoles (PSVs) (PubMed:27288222).
messages: Endosome membrane
messages: Expressed during pollen germination and pollen tube growth.
messages: Expressed in roots and actively dividing cells.
messages: Interacts with VPS9A homodimer (PubMed:18055610, PubMed:20833725). Interacts with TCTP1 (PubMed:20736351). Interacts with MON1 (PubMed:24824487). Interacts with EREX (via PX domain) (PubMed:27288222). Binds to VPS3 (PubMed:29463724).
messages: Over-expression of the constitutively active GTP-bound mutant of Leu-69 induces the formation of large ring-like structures of 1-2 micrometers in diameter.
messages: Prevacuolar compartment membrane
messages: Regulated by guanine nucleotide exchange factors (GEFs) which promote the exchange of bound GDP for free GTP.
messages: multivesicular body membrane

3702:AT5G05310
gene id: 3702:AT5G05310
uniprot id: A0A1P8BCM5
uniprot id: A0A1P8BCM7
uniprot id: A0A654FYL3
uniprot id: F4JZA0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ADP/ATP translocase tlc family.
messages: Membrane
messages: chloroplast membrane

3702:AT1G69720
gene id: 3702:AT1G69720
uniprot id: A0A654EMU9
uniprot id: Q9C9L4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the heme oxygenase family.
messages: Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Produces specifically the biliverdin IX-alpha isomer. Plays a minor role in phytochrome assembly and photomorphogenesis.
messages: No visible phenotype under normal growth conditions.
messages: Widely expressed at low levels.
messages: chloroplast

3702:AT2G17620
gene id: 3702:AT2G17620
uniprot id: Q39068
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Interacts with CDC20-1 and CDC20-2.

3702:AT1G16120
gene id: 3702:AT1G16120
uniprot id: A0A654EB31
uniprot id: Q9S9M5
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Induced by INA.
messages: Membrane
messages: Preferentially expressed in roots and flowers.
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
messages: The EGF-like region is specific to this family of proteins and seems to consist of the C-terminal of an EGF-like domain fused to the N-terminal of another one.

3702:AT2G27370
gene id: 3702:AT2G27370
uniprot id: A0A178VTI8
uniprot id: Q9ZQI2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Disorganised deposition of Casparian strips.
messages: Homodimer and heterodimers with other CASP proteins. Interacts with CASP1, CASP2, CASP4 and CASP5.
messages: Homodimer and heterodimers.
messages: Membrane
messages: Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

3702:AT5G52890
gene id: 3702:AT5G52890
uniprot id: A0A178UJL2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G26210
gene id: 3702:AT4G26210
uniprot id: A0A178V5J1
uniprot id: Q9STR3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase g subunit family.
messages: Membrane

3702:AT1G15960
gene id: 3702:AT1G15960
uniprot id: A0A5S9UPG8
uniprot id: Q9S9N8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NRAMP (TC 2.A.55) family.
messages: Endomembrane system
messages: Expressed in the vascular bundles of shoots, cotyledons, young leaves, sepals and petals, at the top of the flower stem and in the style. Expressed in the peduncle of developing siliques as well as in the septum and the funiculi.
messages: No visible phenotype under normal growth condition, but in presence of Cd, increased tolerance to Cd toxicity.
messages: Probable intracellular cadmium (Cd) transporter that participates in the distribution or availability of Cd within the cell.

3702:AT1G22380
gene id: 3702:AT1G22380
uniprot id: Q9LMF1
uniprot id: W8PW16
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Expressed in roots and flowers.

3702:AT1G75760
gene id: 3702:AT1G75760
uniprot id: A0A178WBU7
uniprot id: A0A1P8ANJ0
uniprot id: A0A1P8ANJ6
uniprot id: Q84TL5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERD2 family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G35490
gene id: 3702:AT2G35490
uniprot id: A0A178VLB7
uniprot id: O82291
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAP/fibrillin family.
messages: Probably involved in light/cold stress-related jasmonate (JA) biosynthesis.
messages: Simultaneous down-regulation of PAP1, PAP2 and PAP3 leads to impaired long-term acclimation to environmental constraint, namely photooxidative stress imposed by high light combined with cold.
messages: plastoglobule

3702:AT2G20805
gene id: 3702:AT2G20805
uniprot id: Q1PF30
names: Similarity
messages: Belongs to the GeBP family.

3702:AT5G29000
gene id: 3702:AT5G29000
uniprot id: A0A178ULC5
uniprot id: A0A178ULG0
uniprot id: Q8GUN5
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MYB-CC family.
messages: Expressed in shoots and roots.
messages: Homodimers and heterodimers (PubMed:20838596). Interacts with MED25 (PubMed:21343311, PubMed:21536906). Does not interact with PHL2 or PHL3 (PubMed:26586833).
messages: No effect on phosphate starvation responsiveness, due to the redundancy with PHR1.
messages: Not up-regulated by Pi starvation.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639).

3702:AT3G16700
gene id: 3702:AT3G16700
uniprot id: A0A178VDU3
uniprot id: A8MQJ9
uniprot id: Q681F1
uniprot id: Q9LUR3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAH family.
messages: Mitochondrion
messages: Probable acylpyruvase. Binds copper in vitro.

3702:AT5G11630
gene id: 3702:AT5G11630
uniprot id: Q6NNL9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Abnormal mitochondrial morphology, functionality and distribution (PubMed:23370715). Reduced sensitivity to isoxaben (an herbicide inhibiting cellulose synthesis and altering the cell wall) and to waving-inducing oxylipins such as 9-hydroxyoctadecatrienoic acid and derivatives (9-HOT, 2-HOE, 13-HOT, 13-HOD, 13-KOD, 12,13-KHOD, 9-HOT, 9-HOD, 9-KOT, 9-KOD and 9,10-KHOE) treatment leading to an altered root development (e.g. increased numbers of lateral roots, disrupted callose accumulation and altered root waving); 9-HOT is a potent inducer of root waving and an endogenous modulator of lateral root formation (PubMed:17369372, PubMed:23370715, PubMed:26417008). Enhanced susceptibility to pathogenic bacteria (e.g. Pseudomonas syringae pv tomato) both avirulent (e.g. Pst DC3000 avrRPM1) and virulent (e.g. Pst DC3000) strains associated with reduced and delayed expression of salicylic acid (SA)-responding pathogenesis-related genes (e.g. PR1, PR2 and PR4) and of 9-HOT-responsive genes (e.g. PER71, PIF3, CYP71A12 and GLP9); these phenotypes are associated with reduced callose deposition upon infection (PubMed:17369372, PubMed:23370715, PubMed:26417008). Increased susceptibility to the obligate biotrophic pathogenic fungus Golovinomyces cichoracearum (PubMed:26417008). Defective in 9-lipoxygenase (9-LOX)-derived oxylipin synthesis, but normal responses to brassinosteroids (BRs) (PubMed:26417008).
messages: Accumulates in cotyledons and roots after treatments with isoxaben (an herbicide) and 9-hydroxyoctadecatrienoic acid (9-HOT) (PubMed:23370715). Induced in leaves inoculated with Pseudomonas syringae pv tomato (Pst) (PubMed:23370715).
messages: Essential for mitochondrial morphology, functionality and distribution (PubMed:23370715). Contributes to 9-lipoxygenase (9-LOX)-derived oxylipin synthesis, but not to brassinosteroids (BRs) signaling (PubMed:26417008). Required for waving-inducing oxylipin 9-hydroxyoctadecatrienoic acid and derivatives (e.g. 9-HOT, 2-HOE, 13-HOT, 13-HOD, 13-KOD, 12,13-KHOD, 9-HOT, 9-HOD, 9-KOT, 9-KOD and 9,10-KHOE)-mediated root development regulation, including callose deposition, root waving and lateral roots formation (PubMed:17369372, PubMed:23370715, PubMed:26417008). Involved in basal plant defense toward pathogenic bacteria (e.g. Pseudomonas syringae pv tomato), both in compatible (e.g. Pst DC3000) and incompatible (e.g. Pst DC3000 avrRPM1) interactions, as well as against obligate biotrophic pathogenic fungi (e.g. Golovinomyces cichoracearum), probably via the promotion of callose deposition in the cell wall (PubMed:17369372, PubMed:23370715, PubMed:26417008). Confers sensitivity to the herbicide isoxaben, an herbicide inhibiting cellulose synthesis and altering the cell wall (PubMed:23370715).
messages: Expressed in cotyledons, roots and flowers.
messages: First observed in vascular tissues, lateral root primordia, and root meristems.
messages: Mitochondrion

3702:AT3G56320
gene id: 3702:AT3G56320
uniprot id: A0A384KWT3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G29080
gene id: 3702:AT4G29080
uniprot id: A0A178V3Y7
uniprot id: Q9ZSY8
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers (By similarity). Interacts with phytochrome A. Interacts with TPL.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT3G24650
gene id: 3702:AT3G24650
uniprot id: Q01593
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Due to a cryptic intron removal.
messages: Expressed in the embryos, endosperm, and outer teguments of the seed throughout seed development.
messages: Interacts (via C-terminus) with SPK1, SCAR3, ABI5, APRR1, AIP2, AIP3 and AIP4. Binds to BZIP10 and BZIP25 and forms complexes made of ABI3, BZIP53 and BZIP25 or BZIP10.
messages: Isoform 2 accumulates only at the end of seed maturation.
messages: Nucleus
messages: Participates in abscisic acid-regulated gene expression during seed development. Regulates the transcription of SGR1 and SGR2 that are involved in leaf and embryo degreening.
messages: Repressed by silencing mediated by polycomb group (PcG) protein complex containing EMF1 and EMF2.
messages: The truncated abi3-6 mutant lacking the DNA-binding domain is unable to localize to the nucleus and is an embryo stay-green mutant.
messages: Ubiquitinated by AIP2. Ubiquitination probably leads to its subsequent degradation, thus negatively regulating ABA signaling.

3702:AT4G25520
gene id: 3702:AT4G25520
uniprot id: Q0WVM7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the adn1/SEU family.
messages: Expressed in young flower meristems, ovules and the carpel margin meristem.
messages: Forms corepressor complexes with LUH; LUH is the transcription repressor subunit and SLK1 the specific DNA-binding adapters.
messages: No visible phenotype under normal growth conditions, but the double mutants seu and slk1 are short in stature, sterile and display strong disruptions of floral development and high frequency of female gametophyte disruption (PubMed:20007451). Enhanced tolerance to salt and osmotic stress conditions (PubMed:24564815).
messages: Nucleus
messages: Probable transcription regulator that functions in the development of the carpel margin meristem similarly to SEUSS (SEU). In association with SEU, supports organ development from meristematic regions by facilitating auxin response and thus organ initiation, and by sustaining meristematic potential through the maintenance of PHABULOSA expression (PubMed:20007451). DNA-binding adapter subunit of the SEU-SLK1 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes (PubMed:24564815).

3702:AT4G00110
gene id: 3702:AT4G00110
uniprot id: O81312
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Golgi stack membrane
messages: Homodimer.
messages: In roots, leaves, siliques, flowers, pollen and stems.
messages: Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components.

3702:AT1G02620
gene id: 3702:AT1G02620
uniprot id: Q3E6Q3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. SAR1 family.
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Involved in transport from the endoplasmic reticulum to the Golgi apparatus.

3702:AT2G20760
gene id: 3702:AT2G20760
uniprot id: Q9SKU1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the clathrin light chain family.
messages: Clathrin coats are formed from molecules containing 3 heavy chains and 3 light chains.
messages: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
messages: Cytoplasmic vesicle membrane
messages: coated pit

3702:AT2G01680
gene id: 3702:AT2G01680
uniprot id: A0A178VS18
uniprot id: Q9ZU96
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G54470
gene id: 3702:AT5G54470
uniprot id: A0A178UJV0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G17245
gene id: 3702:AT4G17245
uniprot id: A0A178UVR3
uniprot id: Q940N3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane

3702:AT2G46470
gene id: 3702:AT2G46470
uniprot id: A0A178W0K4
uniprot id: Q9SKD3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OXA1/ALB3/YidC (TC 2.A.9.2) family.
messages: Belongs to the OXA1/ALB3/YidC family.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Probably required for the insertion of integral membrane proteins into the mitochondrial inner membrane. May participate in the activity and assembly of cytochrome oxidase (By similarity).

3702:AT5G62230
gene id: 3702:AT5G62230
uniprot id: A0A654GDB1
uniprot id: C0LGW6
uniprot id: F4K6F3
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: At the vegetative stage, strongly expressed in the shoot meristem, leaf primordia and juvenile leaves. At the reproductive stage, localized in the young developing flowers. Expressed in inflorescence meristem and is up-regulated during flower initiation and formation of flower organs. Also found in cells that differentiate into pedicels.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Homodimer and heterodimer with ERECTA and TMM. Interacts with EPF1 and EPF2. Interacts with SERK1, SERK2, SERK3/BAK1 and SERK4 in a EPF1-induced manner (PubMed:26320950).
messages: Mostly expressed in developing organs, including bud clusters, flowers, siliques and young rosettes. Also detected in mature aboveground organs, such as leaves, stems and pedicels, but barely in roots.
messages: Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2. Redundantly involved with ER in procambial development regulation. Forms a functional ligand-receptor pair with EPF1 (AC Q8S8I4) (PubMed:22241782). Forms a constitutive complex with TMM involved in the recognition of the stomatal regulatory peptides EPF1, EPF2 and EPFL9/STOMAGEN (PubMed:28536146).
messages: The kinase domain is not required for ligand binding.

3702:AT1G67680
gene id: 3702:AT1G67680
uniprot id: Q9FXD4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SRP72 family.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER).
messages: Cytoplasm

3702:AT1G28470
gene id: 3702:AT1G28470
uniprot id: F4HY61
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in protoxylem and elongating interfascicular fiber cells of elongating internodes, developing metaxylem cells and interfascicular fibers of non-elongating internodes and developing secondary xylem of roots.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers. Is a direct target of SND1.

3702:AT3G25080
gene id: 3702:AT3G25080
uniprot id: Q6E244
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.

3702:AT1G09950
gene id: 3702:AT1G09950
uniprot id: O04515
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
messages: Decreased salt and abscisic acid (ABA) sensitivity.
messages: Induced by abscisic acid (ABA) and salt stress (NaCl) (PubMed:20212128). Up-regulated by ZAT18 upon drought (PubMed:28586434).
messages: Loss of function contributes to the increased salt (NaCl) tolerance of cv. Sha.
messages: Negative regulator of salt (NaCl) tolerance probably by enhancing abscisic acid (ABA) sensitivity.

3702:AT5G04690
gene id: 3702:AT5G04690
uniprot id: A0A1P8BCP0
uniprot id: A0A1P8BCP7
uniprot id: A0A654FYH3
uniprot id: Q9LZ28
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G04490
gene id: 3702:AT3G04490
uniprot id: A0A1I9LPW2
uniprot id: A0A1I9LPW3
uniprot id: A0A1I9LPW4
uniprot id: A0A5S9X8Z9
uniprot id: F4J3Q2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the exportin family.
messages: Nucleus

3702:AT1G08940
gene id: 3702:AT1G08940
uniprot id: O04035
names: Function
names: Similarity
messages: Belongs to the phosphoglycerate mutase family.
messages: May play a role in carbohydrates metabolism.

3702:AT3G16730
gene id: 3702:AT3G16730
uniprot id: A0A654F7W9
uniprot id: Q9LUR0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CND2 H2 (condensin-2 subunit 2) family.
messages: By boron excess (B).
messages: Chromosome
messages: Component of the condensin-2 complex.
messages: Enhanced sensitivity to excess boron (B), to zeocin, which induces DNA double-strand breaks (DSBs), and to aphidicolin, which blocks DNA replication, probably due to the accumulation of DSBs. Reduced root length, especially in the presence of genotoxic stressors, with twisted shape, ectopic lateral root formation and dense root hairs, as well as short meristematic zones.
messages: Expressed in seedlings, roots, stems, leaves, flower buds and flowers.
messages: Regulatory subunit of the condensin-2 complex, a complex that seems to provide chromosomes with an additional level of organization and rigidity and in establishing mitotic chromosome architecture (By similarity). The condensin-2 complex plays a role in DNA damage repair or in protecting the genome from certain genotoxic stressors (e.g. boron excess, zeocin and aphidicolin).
messages: nucleolus

3702:AT4G04770
gene id: 3702:AT4G04770
uniprot id: A0A7G2EV07
uniprot id: Q9ZS97
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0051 (ycf24) family.
messages: By PHYA.
messages: Involved in light signaling, probably by mediating the transport and correct distribution of protoporphyrin IX, a chlorophyll precursor, in response to far-red light.
messages: Plant have an enhanced hypocotyl elongation in far-red light, and accumulates protoporphyrin IX.
messages: Was originally (PubMed:11346655) thought to belong to the ABC transporter family. Lacks the conserved ABC domain, which is one of the features of the ABC transporter family.
messages: chloroplast

3702:AT5G19870
gene id: 3702:AT5G19870
uniprot id: A0A178UDP9
uniprot id: Q66GS4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM45 family.
messages: Membrane

3702:AT5G63320
gene id: 3702:AT5G63320
uniprot id: Q9FGW9
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a negative regulator in plant response to changes in environmental conditions through the control of ABA-regulated gene expression.
messages: Interacts with TIP/NAC091.
messages: May be due to intron retention.
messages: Nucleus
messages: Up-regulated by potassium deprivation, by salt stress, cold and treatment with exogenous abscisic acid (ABA).
messages: Widely expressed in all tissues.

3702:AT4G13260
gene id: 3702:AT4G13260
uniprot id: A0A1P8B4H6
uniprot id: Q9SVQ1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the FMO family.
messages: Expressed in anthers and in the apical gynoecium.
messages: Involved in auxin biosynthesis. Converts the indole-3-pyruvic acid (IPA) produced by the TAA family to indole-3-acetic acid (IAA). Unable to use tryptamine (TAM) as substrate. Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots.
messages: No visible phenotype, due to the redundancy with the other members of the YUCCA family.
messages: Up-regulated by glucose. Down-regulated by heat stress. Positively regulated by LEC2 and by NGA3. Negatively regulated by SPL.

3702:AT4G24973
gene id: 3702:AT4G24973
uniprot id: B3H730
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G52020
gene id: 3702:AT5G52020
uniprot id: A0A178URU0
uniprot id: Q9FJ90
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G56160
gene id: 3702:AT5G56160
uniprot id: A0A178UD46
uniprot id: F4K6D3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFH family.
messages: Cell membrane
messages: Golgi apparatus membrane
messages: Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G12235
gene id: 3702:AT5G12235
uniprot id: Q3E9I4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance.
messages: Mostly expressed in stems and apex, and, to a lower extent, in seedlings, leaves, flowers and siliques.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-97 enhances binding affinity of the CLE22p peptide for its receptor.
messages: extracellular space

3702:AT1G75240
gene id: 3702:AT1G75240
uniprot id: Q9FRL5
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Homo- and heterodimer with other ZFHD proteins. Interacts with MIF1, MIF2 and MIF3; these interactions prevent nuclear localization and DNA-binding to inhibit transcription regulation activity. Binds to ZHD1, ZHD2, ZHD4, ZHD10 and ZHD11.
messages: Increased resistance to abscisic acid (ABA) in the seed germination and primary root growth.
messages: Mostly expressed in flowers and inflorescence.
messages: Nucleus
messages: Putative transcription factor. Binds DNA at 5'-ATTA-3' consensus promoter regions. Regulates floral architecture and leaf development. Regulators in the abscisic acid (ABA) signal pathway that confers sensitivity to ABA in an ARF2-dependent manner.
messages: Repressed by abscisic acid (ABA) and ARF2.
messages: The homeodomain differs form the typical one by having namely 4 instead of 3 extra amino acids inserted in the loop between helix 1 and helix 2.

3702:AT1G06110
gene id: 3702:AT1G06110
uniprot id: Q9LND7
names: Domain
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1, SKP1B/ASK2, ASK4, ASK11 and ASK13.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT2G16700
gene id: 3702:AT2G16700
uniprot id: A0A178VPY9
uniprot id: A0A1P8B198
uniprot id: F4ILA8
uniprot id: Q9ZNT3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers.
messages: Belongs to the actin-binding proteins ADF family.
messages: By the root-knot nematode Meloidogyne incognita.
messages: Expressed exclusively in root tip meristem.
messages: cytoskeleton

3702:AT4G34131
gene id: 3702:AT4G34131
uniprot id: Q8W491
uniprot id: W8Q6H7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Decreased resistance to avirulent strains of P.syringae.
messages: Expressed in roots and flowers.
messages: Induced by pathogen infection, by H(2)O(2) and by salicylic acid.
messages: Possesses quercetin 3-O-glucosyltransferase activity in vitro. Also active in vitro on benzoates and benzoate derivatives. Involved in stress or defense responses.

3702:AT1G75540
gene id: 3702:AT1G75540
uniprot id: Q9LQZ7
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Enhanced number of emerged lateral roots.
messages: Interacts with COP1, HY5 and BBX32. Interacts with FLZ1 (PubMed:24901469).
messages: Nucleus
messages: Transcription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414).

3702:AT4G01883
gene id: 3702:AT4G01883
uniprot id: A0A1P8B516
uniprot id: A0A1P8B524
uniprot id: A0A5S9XPB8
uniprot id: Q1G3L2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the COQ10 family.
messages: Interacts with coenzyme Q.
messages: Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.

3702:AT1G28250
gene id: 3702:AT1G28250
uniprot id: A0A178W219
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G24140
gene id: 3702:AT4G24140
uniprot id: O22977
names: Function
names: Subcellular Location Annotation
messages: Cell membrane
messages: Involved in cuticle development and morphogenesis.
messages: cell wall

3702:AT4G00220
gene id: 3702:AT4G00220
uniprot id: O81323
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in roots, stems, leaves and flowers (PubMed:12068116). Expressed in vascular tissues of hypocotyls, leaves, roots, developing floral organs and siliques (PubMed:19088331).
messages: Involved in the positive regulation of tracheary element (TE) differentiation. Involved in a positive feedback loop that maintains or promotes NAC030/VND7 expression that regulates TE differentiation-related genes.
messages: Plants over-expressing LBD30 have a dwarf and bushy phenotype, with short petioles, curled downward leaves, ectopic shoots from the adaxial side of cotyledons, shrunken root tips and disorganized columella cells.

3702:AT1G51810
gene id: 3702:AT1G51810
uniprot id: Q9FZB8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT5G65530
gene id: 3702:AT5G65530
uniprot id: F4KI00
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT3G50740
gene id: 3702:AT3G50740
uniprot id: Q94A84
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Expressed in seedlings, roots and leaves.
messages: Interacts with SIS8.
messages: No visible phenotype under normal growth conditions, but mutant plants display a sugar-resistant seedling development phenotype.
messages: Nucleus
messages: UDP-glycosyltransferase that glucosylates coniferyl aldehyde to form coniferyl aldehyde 4-O-glucoside (PubMed:15907484). Glucosylates sinapyl aldehyde to form sinapyl aldehyde 4-O-glucoside (PubMed:15907484). Is not active in presence of coniferyl alcohol or sinapyl alcohol (PubMed:15907484). Can glucosylate the phytotoxic xenobiotic compound 2,4,5-trichlorophenol (TCP) (PubMed:15907484).

3702:AT4G27120
gene id: 3702:AT4G27120
uniprot id: Q94C53
names: Similarity
messages: Belongs to the DDRGK1 family.

3702:AT2G25840
gene id: 3702:AT2G25840
uniprot id: A0A178VQC6
uniprot id: A0A1P8AY21
uniprot id: F4ISP4
uniprot id: F4ISP6
uniprot id: Q8RXE9
names: Caution
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Lethal. In heterozygous plants, aborted ovules.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT1G03790
gene id: 3702:AT1G03790
uniprot id: Q9ZWA1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Increased levels of JMJ20 and JMJ22 in far-red (FR) conditions.
messages: Interacts with MARD1/FLZ9 and RD21A.
messages: Nucleus
messages: Plants lacking SOM germinate in darkness, independently of various light regimens.
messages: Probable transcription repressor that functions as negative regulator of phytochrome-mediated promotion of seed germination. Inhibits seed germination by regulating the expression of gibberellic acid (GA) and abscisic acid (ABA) metabolic genes. Does not regulate the expression of the DELLA genes RGA and RGA1. Activated by PIL5, a phytochrome-interacting basic helix-loop-helix transcription factor (PubMed:18487351). Represses directly JMJ20 and JMJ22 expression in the absence of red light (R) and in far-red (FR) conditions (PubMed:22483719).
messages: Specifically expressed in seeds.

3702:AT1G78895
gene id: 3702:AT1G78895
uniprot id: A0A178WDP1
uniprot id: Q8GWH5
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT5G14590
gene id: 3702:AT5G14590
uniprot id: A0A5S9Y6C3
uniprot id: Q8LPJ5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: May be involved in response to oxidative stresses.
messages: Mitochondrion
messages: chloroplast

3702:AT5G65940
gene id: 3702:AT5G65940
uniprot id: A0A178UQY3
uniprot id: A0A5S9YI55
uniprot id: Q9LKJ1
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Down-regulated by sugar.
messages: Expressed in roots, leaves, flowers and siliques.
messages: Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism.
messages: Induced during post-germinative growth. Detected in imbibed seeds.
messages: Inhibited by copper.
messages: Involved in valine catabolism. May be indirectly involved in benzoic acid biosynthesis and in cold signaling and cold tolerance.
messages: Loss of function mutants are defective in beta-oxidization of fatty acids and in the conversion of indole-3-butyric acid (IBA) to indole-3-acetic acid (IAA). These inhibitions may be due to the accumulation of a toxic intermediate. The mutants are also less tolerant to freezing stress after cold acclimation.
messages: Peroxisome
messages: Resistant to inhibition of root elongation and promotion of lateral root formation by the auxin precursor indole-3-butyric acid (IBA). Deficiency of benzoic acid-containing glucosinolates in the seeds. Resistance to the pro-herbicide 2,4-dichlorophenoxybutyric acid (2,4-DB).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G54925
gene id: 3702:AT3G54925
uniprot id: B3H7I0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G14695
gene id: 3702:AT2G14695
uniprot id: A0A1P8AXP5
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G30930
gene id: 3702:AT4G30930
uniprot id: A0A178UZG0
uniprot id: Q8L9A0
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Constitutively expressed in roots, stems, leaves, flowers, pistils and siliques.
messages: Failure of fusion of the polar nuclei during megagametogenesis and abnormal double fertilization; fails to undergo fusion of the outer nuclear membranes.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: This protein binds to 23S ribosomal RNA in the presence of protein L20 (By similarity). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus, and during double fertilization of the egg cell and the central cell (PubMed:16698901).

3702:AT2G25790
gene id: 3702:AT2G25790
uniprot id: O82318
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in pollen grains and roots vascular tissues (PubMed:23910659). Present in roots (PubMed:27354416).
messages: In roots, restricted to the mature vasculature but absent from the meristem.
messages: Insensitivity of pollen tubes to CLE43 and, partially, to CLE45 peptides-mediated growth stimulation (PubMed:23910659). Pollen tubes of plants missing both SKM1 and SKM2 are fully insensitive to CLE45 peptides (PubMed:23910659). Reduced seed production at 30 degrees Celsius, but not at 22 degrees Celsius (PubMed:23910659).
messages: Receptor with a serine/threonine-protein kinase activity (By similarity). Together with SKM2, LRR-rich receptor-like kinase (LRR-RLK) required for male fertility by the perception of CLE43 and CLE45 peptides and the transduction of their promoting action in pollen tubes, especially under relatively high temperature (at 30 degrees Celsius), thus conferring tolerance against high temperature probably through the maintenance of mitochondrial activity (PubMed:23910659). Seems to not be involved in the perception of CLE45 peptide in roots (PubMed:27354416).
messages: Self-interacts (By similarity). Binds to CLE45 present in the pistil, particularly under relatively high temperature (at 30 degrees Celsius) (PubMed:23910659).

3702:AT4G34470
gene id: 3702:AT4G34470
uniprot id: O65674
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: Expressed in young seedlings, roots, leaves, floral stems, inflorescences, and siliques, with a slightly higher level in inflorescence than in other tissues.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity). Plays a role during early flowers reproductive development.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with ADO3/FKF1, COI1/FBL2, EBF1/FBL6, PP2B10, At3g61590 and At5g49610.

3702:AT1G51260
gene id: 3702:AT1G51260
uniprot id: A0A178WEX6
uniprot id: Q9SYC8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
messages: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position. Has preference for C-18-CoA substrates compared to C-16-CoA substrates.
messages: Membrane
messages: Predominantly expressed in pollen.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.

3702:AT5G15900
gene id: 3702:AT5G15900
uniprot id: A0A1P8BFJ2
uniprot id: A0A6G8RRL6
uniprot id: Q9LFT0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT1G71230
gene id: 3702:AT1G71230
uniprot id: A0A1P8AQF0
uniprot id: A0A654EN23
uniprot id: Q9FVU9
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase M67A family. CSN5 subfamily.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8 (PubMed:9811788, PubMed:12615944, PubMed:15486099). CSN5A or CSN5B are present within distinct CSN complexes each containing only one copy of CSN5 (PubMed:15486099). Interacts with itself (PubMed:9811788). In the complex, it is located in the center and probably interacts directly with CSN4 and CSN6A or CSN6B (PubMed:9811788, PubMed:12615944). Also exists as monomeric form (PubMed:9811788). Interacts with CYT1 in vitro and in planta (PubMed:23424245). Interacts with FLZ3 (Ref.11).
messages: Cytoplasm
messages: No visible phenotype and no effect on the derubylation of CUL1 (PubMed:15486099, PubMed:17307927). Csn5a and csn5b double mutants are lethal at the seedling stage (PubMed:17307927).
messages: Nucleus
messages: Probable protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. In the complex, it probably acts as the catalytic center that mediates the cleavage of Nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex (By similarity). The CSN complex is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Not involved in CSN's deneddylation/derubylation activity (PubMed:15486099, PubMed:17307927). Essential for the structural integrity of the CSN holocomplex (PubMed:17307927).
messages: The JAMM motif is essential for the protease activity of the CSN complex resulting in deneddylation of cullins. It constitutes the catalytic center of the complex (By similarity).
messages: Ubiquitously expressed. Highly expressed in flowers and roots. Expressed at lower level in seedlings and siliques.

3702:AT5G55490
gene id: 3702:AT5G55490
uniprot id: A0A384KFV4
uniprot id: Q681K7
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Embryo lethal when homozygote.
messages: Has a dual function during gametophyte development and early embryogenesis. Required for correct pollen maturation.
messages: Homodimer.
messages: In tricellular pollen, expressed in mature sperm cells. Not expressed in bicellular or unicellular pollen. Detected in ovules, roots and guard cells. Expressed in the embryo sac before cellularization, in the egg cell after cellularization, in the zygote/embryo immediately after fertilization and in the pollen vegetative cell.
messages: The extracellular domain (25-427) is sufficient for male and female gametophyte development before double fertilization, but not for early embryogenesis. The cytoplasmic domain (507-593) is necessary for correct early embryogenesis and mediates homodimer formation at the plasma membrane.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G15233
gene id: 3702:AT4G15233
uniprot id: A0A1P8B7N9
uniprot id: A0A1P8B7P4
uniprot id: A0A1P8B7P5
uniprot id: A0A1P8B7Q6
uniprot id: Q7PC82
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
messages: Confined to shoots.
messages: May be a general defense protein.
messages: Membrane

3702:AT1G76350
gene id: 3702:AT1G76350
uniprot id: A0A178W0G0
uniprot id: Q9SFW8
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Probable transcription factor.

3702:AT2G44470
gene id: 3702:AT2G44470
uniprot id: Q8GXT2
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT2G03290
gene id: 3702:AT2G03290
uniprot id: A0A654ET45
uniprot id: O81045
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EMP24/GP25L family.
messages: Endoplasmic reticulum membrane
messages: Golgi stack membrane
messages: Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side (By similarity). On Golgi membranes, acts as primary receptor for ARF1-GDP which is involved in COPI-vesicle formation.
messages: Membrane
messages: Probably oligomerizes with other members of the EMP24/GP25L family (By similarity). Associates with the COPI vesicle coat (coatomer). Associates with the COPII vesicle coat (coatomer). Interacts with ARF1 (GDP-bound).
messages: The cytoplasmic C-terminal domain contains a functional dilysine-retrieval motif, which is involved in the retrograde Golgi-to-ER transport of the protein.
messages: cis-Golgi network membrane

3702:AT2G16505
gene id: 3702:AT2G16505
uniprot id: A8MQY8
names: Similarity
names: Tissue Specificity
messages: Belongs to the MEG family.
messages: Expressed in flowers.

3702:AT1G14870
gene id: 3702:AT1G14870
uniprot id: Q9LQU4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cornifelin family.
messages: Cell membrane
messages: Constitutively expressed. Up-regulated in the shoots by cadmium. Down-regulated under zinc deficiency.
messages: Expressed in roots, leaves, shoots, stems, flowers and siliques. In leaves, restricted mainly to the vascular tissue. Expressed in all cells in the root tip, in the vascular tissue and the epidermis in the elongation zone, and only in the epidermal cells in the root hair zone.
messages: Homooligomer.
messages: Strongly impaired growth in the presence of heavy metals such as zinc, cadmium, copper or iron.
messages: Zinc transporter acting in both zinc extrusion and long-distance zinc transport. Involved in the loading of zinc into the xyleme and in the detoxification of excess zinc at the epidermal cells. Acts independently from the zinc transporters HMA2 and HMA4. May be also involved in cadmium resistance.

3702:AT4G18750
gene id: 3702:AT4G18750
uniprot id: Q9SN39
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Binds 2 zinc ions per subunit.
messages: Defects in venation pattern in leaves and cotyledons.
messages: Plays a major role in single RNA editing events in chloroplasts. Acts as a site-recognition transacting factor involved in the edition of the unique site (corresponding to cytidine-488) of rpoC1, which is a plastid-encoded subunit of the chloroplast DNA-directed RNA polymerase. May provide the catalytic activity for editing site conversion (PubMed:24194514). Involved in leaf vasculature patterning (PubMed:18643975).
messages: Weakly expressed in leaves.
messages: chloroplast

3702:AT5G25190
gene id: 3702:AT5G25190
uniprot id: A0A178UBV4
uniprot id: Q94AW5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G26742
gene id: 3702:AT5G26742
uniprot id: A0A178URN6
uniprot id: A0A178UT03
uniprot id: F4K180
uniprot id: Q8L7S8
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEAD box helicase family. DDX21/DDX50 subfamily.
messages: Embryonic lethality when homozygous.
messages: Highly expressed in young seedlings.
messages: Nuclear genome-encoded factor involved in ribosome biogenesis in chloroplasts (PubMed:22576849, PubMed:23227895, PubMed:25043599). Binds specific group II introns in chloroplasts and facilitates their splicing. Is required for rRNA maturation in plastids and may contribute to the assembly of the large (50S) ribosomal subunit (PubMed:22576849). Required for normal development of chloroplasts (PubMed:22576849, PubMed:23227895, PubMed:25043599). Required for the expression of transcripts encoding plastid-localized enzymes involved in abscisic acid (ABA) biosynthesis. Required for maintenance of ABA levels and response to salt stress (PubMed:23227895). Possesses RNA chaperone activity for proper splicing of introns in chloroplasts. Essential for chloroplast function and abiotic stress responses (PubMed:25043599).
messages: Plants with the weak allele rh3-4 exhibits albino cotyledons, pale green leaf phenotype, slow growth, short petioles, small leaves, reduced content of chlorophyll, altered structure of chloroplast ribosomes and reduced levels of chloroplast proteins.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast
messages: chloroplast stroma

3702:AT5G03690
gene id: 3702:AT5G03690
uniprot id: A0A1P8BBB5
uniprot id: A0A5S9Y1D7
uniprot id: F4KGQ0
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: By glucose and fructose (PubMed:22561114). Induced by abiotic stresses (PubMed:22561114).
messages: Fructose-bisphosphate aldolase that plays a key role in glycolysis and gluconeogenesis.
messages: Highly expressed in flowers.
messages: Homotetramer.
messages: S-glutathionylated at Cys-207.
messages: S-nitrosylated at Cys-207.
messages: cytosol

3702:AT4G09950
gene id: 3702:AT4G09950
uniprot id: Q9T0F4
names: Developmental Stage
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. IAN subfamily.
messages: Down-regulated by aphid infection, 2-aminoethoxyvinylglycine (AVG), high CO(2), isoxaben, and propiconazole treatments. Up-regulated by brassinolides.
messages: Expressed at the late stage of silique development.
messages: Expressed in pollen grains.

3702:AT4G19380
gene id: 3702:AT4G19380
uniprot id: A0A1P8B6G2
uniprot id: O65709
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GMC oxidoreductase family.
messages: Long-chain fatty alcohol oxidase involved in the omega-oxidation pathway of lipid degradation.
messages: Membrane

3702:AT1G76320
gene id: 3702:AT1G76320
uniprot id: A0A178WLY2
uniprot id: A0A178WNR6
uniprot id: A0A384KV74
uniprot id: Q6NQJ7
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT2G19720
gene id: 3702:AT2G19720
uniprot id: A0A178W114
uniprot id: O82205
names: Similarity
messages: Belongs to the universal ribosomal protein uS8 family.

3702:AT2G34500
gene id: 3702:AT2G34500
uniprot id: A0A178VRK5
uniprot id: O64697
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By infection with Pseudomonas syringae.
messages: Expressed in the vascular tissues of roots, shoots and leaves. Expressed in root tips and sepals. Very low expression in stems and siliques.
messages: Membrane
messages: No visible phenotype under normal growth condition, but upon infection with P.syringae, no accumulation of stigmasterol and increased resistance to the pathogen.
messages: Plants overexpressing CYP710A1 show higher levels of stigmasterol and lower levels of beta-sitosterol than the wild-type.
messages: Required to form the C-22 double bond in the sterol side chain. Possesses in vitro C-22 desaturase activity toward beta-sitosterol and produces stigmasterol. No activity with campesterol.

3702:AT3G15920
gene id: 3702:AT3G15920
uniprot id: Q9LSB9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Acts as an effector of RABF2A and RABF2B. Involved in vacuolar transport of storage proteins. Regulates membrane trafficking to protein storage vacuoles (PSVs). Binds specifically to phosphatidylinositol 3-monophosphate (PtdIns3P).
messages: Endosome membrane
messages: Interacts (via PX domain) with RABF2A and RABF2B.
messages: No visible phenotype under normal growth conditions, but the double mutant plants erex and erel1 exhibit severe growth retardation at a juvenile stage.
messages: cytosol

3702:AT2G42590
gene id: 3702:AT2G42590
uniprot id: A0A178VYW7
uniprot id: F4IP53
uniprot id: F4IP55
uniprot id: Q96299
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: Cytoplasm
messages: Interacts with DREB1A and DREB1B in the nucleus.
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
messages: Nucleus

3702:AT3G17070
gene id: 3702:AT3G17070
uniprot id: A0A178VI54
uniprot id: A0A1I9LSU6
uniprot id: Q9LSP0
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT2G28085
gene id: 3702:AT2G28085
uniprot id: A0A178VL24
uniprot id: Q8S8L5
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT4G14590
gene id: 3702:AT4G14590
uniprot id: O23315
names: Similarity
messages: Belongs to the Integrator subunit 3 family.

3702:AT4G01470
gene id: 3702:AT4G01470
uniprot id: A0A654FKX8
uniprot id: O82598
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
messages: By dehydration. Not affected by water stress.
messages: Interacts with cucumber mosaic virus (CMV) Protein 1a.
messages: Membrane
messages: Potential aquaporin, which may facilitate the transport of water and small neutral solutes across cell membranes.
messages: Vacuole membrane

3702:AT5G12480
gene id: 3702:AT5G12480
uniprot id: Q38873
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Cell membrane
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (323-353) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT2G33170
gene id: 3702:AT2G33170
uniprot id: O49318
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT5G60460
gene id: 3702:AT5G60460
uniprot id: A0A654GD07
uniprot id: Q9FKK1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEC61-beta family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G20940
gene id: 3702:AT3G20940
uniprot id: A0A7G2ERW4
uniprot id: Q9LIG9
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT2G23010
gene id: 3702:AT2G23010
uniprot id: A0A178W1Q9
uniprot id: F4ILE5
uniprot id: O64811
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Catalyzes the formation of 1,2-bis-O-sinapoyl beta-D-glucoside and an unidentified compound 1.
messages: Decreased levels of 1,2-disinapoyl-glucose due to a partial redundancy with SCPL8 and SCPL13.
messages: Expressed in seedlings, leaves, flowers and siliques.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Was classified as a serine carboxypeptidase-like (SCPL) protein solely on the basis of the overall sequence similarity (PubMed:15908604) but it has been shown that it belongs to a class of enzymes that catalyze acyltransferase reactions (PubMed:17600138).

3702:AT4G10850
gene id: 3702:AT4G10850
uniprot id: Q8LBF7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SWEET sugar transporter family.
messages: Cell membrane
messages: Forms heterooligomers with SWEET8, SWEET11, SWEET13, SWEET16 and SWEET17.
messages: Induced by the pathogenic bacteria P.syringae pv. tomato.
messages: Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

3702:AT1G77000
gene id: 3702:AT1G77000
uniprot id: O49286
names: Function
messages: Component of SCF(SKP2B) E3 ubiquitin ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of the cyclin-dependent kinase inhibitor KRP1. Does not interact with auxin.

3702:AT4G29470
gene id: 3702:AT4G29470
uniprot id: A0A178UUM4
uniprot id: Q8GV50
names: Cofactor
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phospholipase A2 family.
messages: Binds 1 Ca(2+) ion per subunit.
messages: Endoplasmic reticulum
messages: Expressed during pollen germination and tube growth.
messages: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Releases lysophospholipids (LPLs) and free fatty acids (FFAs) from membrane phospholipids in response to hormones and other external stimuli. Plays a role in pollen development and germination and tube growth.
messages: Secreted
messages: Specifically expressed in flowers but at a low level. Detected specifically in the pollen.
messages: The enzyme has a slight preference for phosphatidylethanolamine over phosphatidylcholine.

3702:AT1G13920
gene id: 3702:AT1G13920
uniprot id: A0A1P8AQT9
uniprot id: A0A1P8AR05
uniprot id: Q9XI94
names: Similarity
messages: Belongs to the remorin family.

3702:AT5G18860
gene id: 3702:AT5G18860
uniprot id: Q8RY23
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the IUNH family.
messages: By jasmonic acid (JA) and wounding.
messages: Extracellular purine-specific hydrolase present in the apoplastic fluid involved in the degradation of extracellular nucleosides, including inosine and adenosine, and which may participate in wound and pathogen responses (e.g. Botrytis cinerea).
messages: Impaired hydrolysis of inosine and adenosine by apoplastic fluid leading to an increased sensitivity to 2-chloroadenosine (PubMed:21235647). The isolated apoplastic sap extracted from the double mutant missing both NSH3 and ENT3 lacks the ability to catalyze the conversion of inosine in hypoxanthine; this double mutant is unable to grow on medium containing inosine as sole nitrogen source, in addition plants are more sensitive to the necrotrophic fungus Botrytis cinerea BMM but are resistant to the cytotoxic adenosine analog 2-chloro-adenosine (CADO) and to 5-fluoro-uridine (PubMed:26779190).
messages: apoplast

3702:AT1G25390
gene id: 3702:AT1G25390
uniprot id: Q9C6K9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT3G20865
gene id: 3702:AT3G20865
uniprot id: Q8LD43
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AG-peptide AGP family.
messages: Cell membrane
messages: Contains 4-hydroxyproline; hydroxylated on Pro-28, Pro-30 and Pro-32.
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.
messages: Up-regulated by AHL16/TEK.

3702:AT3G61182
gene id: 3702:AT3G61182
uniprot id: A0A654FJP9
uniprot id: P82768
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G73720
gene id: 3702:AT1G73720
uniprot id: A0A178WHG8
uniprot id: Q8W117
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxiliary spliceosomal protein involved in splicing of specific pre-mRNAs that affect multiple aspects of development. Required for proper accumulation of SMU2.
messages: Belongs to the WD repeat SMU1 family.
messages: Component of the spliceosome B complex (By similarity). Interacts with SMU2 (PubMed:19734266).
messages: Expressed in actively dividing cells, such as newly emerged leaves and root tips. Detected in embryo, female gametophyte including egg cell, central cell, synergid cells and the antipodal cells, and mature pollen.
messages: Lethal when homozygous.
messages: Nucleus

3702:AT4G33905
gene id: 3702:AT4G33905
uniprot id: A0A654FVC1
uniprot id: Q9FPH4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3702:AT4G08930
gene id: 3702:AT4G08930
uniprot id: A0A7G2EY74
uniprot id: Q9ZPE9
names: Sequence Caution
names: Subcellular Location Annotation
messages: Intron retention.
messages: Membrane

3702:AT4G00250
gene id: 3702:AT4G00250
uniprot id: O23077
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GeBP family.
messages: Expressed strongly in leaves and flowers, weakly in roots, and very weakly in stems.
messages: Nucleus
messages: Transcription repressor that binds DNA in a sequence-specific manner, 5'-GCCT-3', to regulate the expression of PGR. Acts as a modulatory component for the glucose-triggered developmental leaf growth process.
messages: Up-regulated upon glucose treatment.

3702:AT2G42040
gene id: 3702:AT2G42040
uniprot id: A0A654F2C6
uniprot id: P93743
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GRF family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: The QLQ domain and WRC domain may be involved in protein-protein interaction and DNA-binding, respectively.
messages: Transcription activator.

3702:AT2G14890
gene id: 3702:AT2G14890
uniprot id: Q9C5S0
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Predominantly expressed in flowers and at a lower level in leaves and siliques.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT1G28330
gene id: 3702:AT1G28330
uniprot id: A0A178WKZ5
uniprot id: A0A178WL09
uniprot id: A0A654EDM5
uniprot id: B9DGG8
names: Disruption Phenotype
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the DRM1/ARP family.
messages: Circadian-regulation (PubMed:24442277). Down-regulated in axillary buds within 24 hours after decapitation and then up-regulated (PubMed:15908603). Down-regulated by the transcription factor ERF114 (PubMed:23616605). Down-regulated by cold (PubMed:24442277). Almost complete down-regulation by sucrose, fructose and glucose, but not by other sugars (PubMed:16463203). Up-regulated by heat and dark growth conditions (PubMed:24442277). Isoform 2: Up-regulated by salt. Isoform 4: Up-regulated by salt. Isoform 1: Not up-regulated by salt. Isoform 5: Not up-regulated by salt (PubMed:24442277).
messages: Isoform 1: Expressed mainly in the low bolt. Isoform 2: Expressed mainly in the low bolt. Detected in flowers. Isoform 4: Expressed mainly in the low bolt. Isoform 5: Expressed mainly in the 6 days old seedlings. Detected in 16 days old seedlings, axil, low bolt and floral samples, but only barely in leaves and top bolt.
messages: May be artifactual or particularly rare.
messages: No visible phenotype. Drm1 and drmh1 double mutants have no visible phenotype.
messages: Predicted to be an intrinsically disordered protein.

3702:AT3G01810
gene id: 3702:AT3G01810
uniprot id: Q9SGJ0
names: Similarity
messages: Belongs to the NUP186/NUP192/NUP205 family.

3702:AT3G47830
gene id: 3702:AT3G47830
uniprot id: F4JCQ3
names: Similarity
messages: Belongs to the DNA glycosylase family.

3702:AT4G15040
gene id: 3702:AT4G15040
uniprot id: A0A1P8B448
uniprot id: O23357
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted
messages: The C-terminal propeptide is autocleaved.

3702:AT2G17420
gene id: 3702:AT2G17420
uniprot id: A0A1P8AZS7
uniprot id: Q39242
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Mitochondrion matrix
messages: Possesses thioredoxin-disulfide reductase activity towards thioredoxins O1, O2 and F3.
messages: The active site is a redox-active disulfide bond.

3702:AT1G34670
gene id: 3702:AT1G34670
uniprot id: Q9S9Z2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: High lateral root developmental progression and enhanced lateral root density.
messages: Induced by abscisic acid (ABA), auxin and gravity in roots.
messages: Interacts with FBX5.
messages: Nucleus
messages: Specifically and transiently expressed in root endodermal cells overlying the early stages of lateral root primordia formation.
messages: Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place.

3702:AT2G16650
gene id: 3702:AT2G16650
uniprot id: A0A1P8B0H9
uniprot id: A0A5S9WYL0
uniprot id: Q680B9
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPR family. P subfamily.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Endonuclease RNase P responsible for the 5' maturation of tRNA precursors (PubMed:22549728, PubMed:26655022). Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers (PubMed:26655022). Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) (PubMed:22549728).
messages: Monomer; forms dimers in crystallo but monomers in solution (PubMed:26655022).
messages: No visible phenotype; due to the redundancy with PRORP3. Prorp2 and prorp3 double mutant is lethal.
messages: Nucleus

3702:AT1G08840
gene id: 3702:AT1G08840
uniprot id: A0A1P8ASU0
uniprot id: A0A1P8ASY1
uniprot id: A0A5S9TCQ8
uniprot id: F4HXR5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 'Jing he sheng' means fasciated stem in Chinese.
messages: Belongs to the DNA2/NAM7 helicase family.
messages: Binds 1 [4Fe-4S] cluster.
messages: Chromosome
messages: Defective embryo arrested at preglobular/early globular stage with the formation of giant endosperm nuclei (PubMed:15266054). In jhs1, retarded growth, abnormal pattern of shoot apical meristem (SAM) cell division and differentiation, and morphological defects such as fasciation, irregular arrangement of siliques and phyllotaxy, and short roots (PubMed:26951435). Increased sensitivity to DNA damage stress (PubMed:26951435). Increased DNA damage response, including increased expression of genes involved in DNA damage repair and cell cycle regulation, and a higher frequency of homologous recombination (PubMed:26951435). Meristems exhibit a delayed cell cycle progression at the G2 or late S phase, and a misregulation of genes essential for meristem maintenance (PubMed:26951435).
messages: Essential protein required during embryogenesis (PubMed:15266054). Key enzyme involved in DNA replication and damage repair, shoot apical meristem (SAM) maintenance, and development (PubMed:26951435). Involved in Okazaki fragments processing. Possesses different enzymatic activities, such as single-stranded DNA (ssDNA)-dependent ATPase, 5'-3' helicase and endonuclease activities. While the ATPase and endonuclease activities are well-defined and play a key role in Okazaki fragments processing and DSB repair, the 5'-3' DNA helicase activity is atypical: it cannot load onto its tracking strand internally and has an absolute free 5'-end requirement (By similarity).
messages: Key enzyme involved in DNA replication and DNA repair. Involved in Okazaki fragments processing by cleaving long flaps that escape FEN1: flaps that are longer than 27 nucleotides are coated by replication protein A complex (RPA), leading to recruit DNA2 which cleaves the flap until it is too short to bind RPA and becomes a substrate for FEN1. Also involved in 5'-end resection of DNA during double-strand break (DSB) repair by mediating the cleavage of 5'-ssDNA.
messages: Nucleus
messages: Strongly expressed in meristems, including both root and shoot apical meristems (RAM and SAM) (PubMed:26951435). Also present in the vasculature and in young floral tissues (PubMed:26951435).

3702:AT4G18680
gene id: 3702:AT4G18680
uniprot id: Q9SN45
names: Disruption Phenotype
messages: No germination phenotype.

3702:AT1G15370
gene id: 3702:AT1G15370
uniprot id: A0A178WMK2
uniprot id: Q9XI32
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes small subunit family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.

3702:AT1G74045
gene id: 3702:AT1G74045
uniprot id: Q58G35
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tetraspanin (TM4SF) family.
messages: May be involved in the regulation of cell differentiation.
messages: Membrane

3702:AT1G55630
gene id: 3702:AT1G55630
uniprot id: Q7X6A5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G27360
gene id: 3702:AT5G27360
uniprot id: A0A1P8BB18
uniprot id: A0A1P8BB22
uniprot id: A0A1P8BB24
uniprot id: Q94CI6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Expressed in leaf vasculature, stem and flowers.
messages: Membrane
messages: Sugar transporter.

3702:AT1G65930
gene id: 3702:AT1G65930
uniprot id: A0A178W7K0
uniprot id: Q9SRZ6
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: May supply 2-oxoglutarate for amino acid biosynthesis and ammonia assimilation via the glutamine synthetase/glutamate synthase (GS/GOGAT) pathway. May be involved in the production of NADPH to promote redox signaling or homeostasis in response to oxidative stress, or redox signaling linked to defense responses.
messages: Slight reduction in plant growth. Constitutive expression of pathogenesis-related genes and enhanced resistance to the bacterial pathogen P.syringae pv. tomato.
messages: cytosol

3702:AT3G60020
gene id: 3702:AT3G60020
uniprot id: A0A178VPE2
uniprot id: Q9M1X4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: In young buds, confined to sepals and pedicels.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity). Interacts with PP2A13.
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.
messages: Restricted to inflorescences, especially in the inflorescence meristem (IM).

3702:AT1G23300
gene id: 3702:AT1G23300
uniprot id: A0A5S9VPG7
uniprot id: F4I4Q3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT2G41170
gene id: 3702:AT2G41170
uniprot id: A0A178W0M6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G50700
gene id: 3702:AT1G50700
uniprot id: A0A178W751
uniprot id: A0A1P8AND9
uniprot id: Q9C6P3
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity). Repressed by THI1 through a negative regulation of the autophosphorylation activity in the presence of Ca(2+) (PubMed:26662273).
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: Ca(2+)-dependent protein kinase (PubMed:26662273). Negative regulator of stomatal closure and slow anion currents (PubMed:26662273). Unable to phosphorylate THI1 in vitro, but the kinase activity is essential for the stomatal closure regulation (PubMed:26662273). Phosphorylates FD (PubMed:25661797). May play a role in signal transduction pathways that involve calcium as a second messenger (Probable).
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in primary roots, leaves, inflorescences, siliques and guard cells (PubMed:26662273). Expressed in the shoot apical meristem (PubMed:25661797).
messages: Increased sensitivity to abscisic acid stomatal closure (PubMed:26662273). Delayed floral transition (PubMed:25661797).
messages: Interacts with THI1 (PubMed:26662273). Interacts with FD and FDP (PubMed:25661797).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (337-367) inactivates kinase activity under calcium-free conditions (By similarity).
messages: Up-regulated by abscisic acid treatment and drought stress, but not by thiamine.

3702:AT3G18020
gene id: 3702:AT3G18020
uniprot id: Q9LSK8
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G05160
gene id: 3702:AT2G05160
uniprot id: Q9SJ41
names: Function
messages: Possesses ribonuclease activity in vitro.

3702:AT5G67385
gene id: 3702:AT5G67385
uniprot id: A0A178URN3
uniprot id: A0A1P8BEF2
uniprot id: A0A384KQK4
uniprot id: Q66GP0
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Acts as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (Probable). Involved in disease resistance. Acts as a substrate adapter that recruits CAMTA3/SR1 for ubiquitination and degradation during pathogen infection. Acts as positive regulator of plant defense by removing the defense suppressor CAMTA3/SR1 (PubMed:24528504).
messages: Belongs to the NPH3 family.
messages: Interacts with CAMTA3 and CUL3A.
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit enhanced susceptibility to the bacterial virulent pathogen Pseudomonas syringae pv tomato strain DC3000.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G27780
gene id: 3702:AT2G27780
uniprot id: Q9ZUX9
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G17060
gene id: 3702:AT5G17060
uniprot id: A0A384LLN8
uniprot id: Q9LFJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Arf family.
messages: GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.
messages: Golgi apparatus

3702:AT1G70810
gene id: 3702:AT1G70810
uniprot id: Q9SSL1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus.
messages: Cell membrane
messages: Nucleus
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity).

3702:AT2G33255
gene id: 3702:AT2G33255
uniprot id: Q8RYE9
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. DOG/GPP family.

3702:AT1G42440
gene id: 3702:AT1G42440
uniprot id: A0A178WDI7
uniprot id: Q9ASU6
names: Caution
names: Subcellular Location Annotation
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: nucleolus

3702:AT2G06000
gene id: 3702:AT2G06000
uniprot id: Q9ZUE9
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G39320
gene id: 3702:AT5G39320
uniprot id: A0A178UJQ6
uniprot id: Q9FM01
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
messages: Inhibited by UDP-xylose.
messages: Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers.
messages: No visible phenotype.
messages: Restricted expression to the primary root in young seedlings. Later detected in hypocotyl, leaves and flowers.
messages: Specifically down-regulated by H.schachtii (cyst nematodes) in nematode-induced syncytia.
messages: Was originally assigned as UGD1.

3702:AT5G08280
gene id: 3702:AT5G08280
uniprot id: A0A654FZE6
uniprot id: Q43316
names: Activity Regulation
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HMBS family.
messages: Binds 1 dipyrromethane group covalently.
messages: Inhibited by NH(3), heavy-metal ions, hydroxylamine and 2-bromoporphobilinogen. Not inhibited by N-ethylmaleimide.
messages: Monomer.
messages: Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
messages: The porphobilinogen subunits are added sequentially to the dipyrromethane cofactor that is covalently attached to the enzyme. The last step of the reaction involves the hydrolysis of the bound polypyrrole chain and the release of hydroxymethylbilane.
messages: chloroplast

3702:AT5G16140
gene id: 3702:AT5G16140
uniprot id: Q9LF14
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PTH family. CRS2 subfamily.
messages: Part of large ribonucleo-protein complexes that include group IIB introns and either CAF1 or CAF2.
messages: Required for the splicing of group IIB introns in chloroplasts.
messages: chloroplast stroma

3702:AT1G44800
gene id: 3702:AT1G44800
uniprot id: Q9LPF1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT2G41850
gene id: 3702:AT2G41850
uniprot id: Q8RY29
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 28 family.
messages: Expressed in roots and in the abscission zone of the sepals, petals and stamens of flowers, at the base of cauline leaves and in the basal cell of trichomes from senescing leaves. Found at the site of lateral root emergence, in the dehiscence zone of anthers and maturing siliques. Also expressed early in anther development, at the time of microspore separation. Expressed in germinating seeds, at the point at which the radicle broke through the seed coat. Not expressed at the junction between the seed and the funiculus or in the dehiscence zone of anthers or pods.
messages: No visible phenotype under normal growth conditions. Small delay in floral organ shedding.
messages: Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission.
messages: Up-regulated by ethylene.
messages: cell wall

3702:AT4G11880
gene id: 3702:AT4G11880
uniprot id: A0A1P8B7Y6
uniprot id: Q38838
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By auxin.
messages: During floral transition, expressed very early at the flanks of the inflorescence meristem in the anlagens upon the transition to flowering Subsequently, expression levels increase in the first and second stages of the floral meristem and at stage 3, expression is restricted to the L1 and L2 layers. Later on, expressed in the gynoecium and stamen primordia at stage 6.
messages: Interacts with AGL16.
messages: Nucleus
messages: Plants over-expressing AGL14/XAL2 show early flowering phenotype and flowers have vegetative traits.
messages: Preferentially expressed in roots (PubMed:7549482). Expressed in lateral root cap, root epidermis, root endodermis, columella of the root meristematic region, the vascular cylinder in differentiated zones of the primary root and in emerged lateral root primordia (PubMed:24121311). Expressed in pollen (PubMed:12949148).
messages: Retarded root growth, and altered root meristem size and stem-cell patterning (PubMed:24121311). Late flowering phenotype (PubMed:25636918).
messages: Transcriptional activator that regulates root development by controlling meristem size and patterning of the root apical meristem. Regulates auxin transport and gradients in the root meristematic cells via direct regulation of the auxin efflux carrier PIN1 and PIN4 gene expression. Binds specifically to the CArG-box DNA sequences in the promoter regions of PIN1 and PIN4 genes (PubMed:24121311). Involved in the regulation of shoot apical meristem (SAM) cell identities and transitions. Promotes flowering transition and participates in flower meristem maintenance and determinacy. Positively regulates TFL1 and WUS expression. Binds directly to the TFL1 regulatory sequences (PubMed:25636918).
messages: XAANTAL is the Mayan word for 'go slower' in recognition of the retarded root growth phenotypes of xaantal mutants.

3702:AT2G04020
gene id: 3702:AT2G04020
uniprot id: Q9SIF3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT2G17820
gene id: 3702:AT2G17820
uniprot id: Q9SXL4
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated predominantly on His residues. Activation probably requires a transfer of a phosphate group between a His in the transmitter domain and an Asp of the receiver domain (By similarity).
messages: Cell membrane
messages: Functions as an osmosensor histidine kinase that detects water stress and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. Positive regulator of drought and salt stress responses, and abscisic acid (ABA) signaling. Confers drought tolerance, probably by regulating levels of ABA accumulation. Plays a redundant role in regulating plant growth and development. Required for the regulation of desiccation processes during seed formation.
messages: Insensitivity to ABA, but hypersensitivity to drought and high salinity stresses. Loss of seed viability over time dur to altered desiccation.
messages: Interacts with AHP2, depending of the phosphorylation state of Asp-1075 in the receiver domain, but probably not with AHP1 and AHP3.
messages: Mostly expressed in roots, and, to a lower extent, in stems, leaves and flowers.
messages: Up-regulated in response to changes in external osmolarity, low temperature, cytokinin (CK) treatment, and dehydration.

3702:AT1G60430
gene id: 3702:AT1G60430
uniprot id: A0A1P8AS90
uniprot id: Q1ECJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ARPC3 family.
messages: Cell projection
messages: Component of the Arp2/3 complex composed of ARP2, ARP3, ARPC1/p41-ARC, ARPC2/p34-ARC, ARPC3/p21-ARC, ARPC4/p20-ARC and ARPC5/p16-ARC. Interacts with SCAR2/DIS3 (WAVE complex).
messages: Expressed at low levels in all tissues with a relatively highest expression in inflorescences.
messages: Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
messages: cytoskeleton

3702:AT4G21690
gene id: 3702:AT4G21690
uniprot id: A0A178V5K5
uniprot id: Q9SVS8
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA3OX subfamily.
messages: Converts the inactive gibberellin (GA) precursors GA9 and GA20 in the bioactives gibberellins GA4 and GA1. Involved in the production of bioactive GA for reproductive development.
messages: Expressed in flower clusters and siliques.

3702:AT1G03103
gene id: 3702:AT1G03103
uniprot id: A0A178WIC9
uniprot id: F4HZB9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Membrane
messages: Probable lipid transfer protein.

3702:AT3G01370
gene id: 3702:AT3G01370
uniprot id: Q8L7C2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Albino seeds that germinate poorly and die soon after germination.
messages: Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM2 and CAF1 or CAF2. Can bind to and promote the splicing of the single group I intron in chloroplast tRNA transcript of trnL-UAA gene.
messages: Interacts with RNA. Part of large ribonucleo-protein particles that contain CAF1 and/or CAF2.
messages: chloroplast stroma

3702:AT5G56130
gene id: 3702:AT5G56130
uniprot id: Q9FKT5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export. Contributes to the integrity of the endogenous trans-acting small interfering RNA (ta-siRNA) pathway. May process or transport a long RNA molecule so that it can be a template for secondary siRNA production. May participate in the trafficking of siRNA precursors to the ARGONAUTE catalytic center. Required for the generation of functional messenger ribonucleoproteins (mRNPs).
messages: Component of the THO complex, which is composed of THO1, THO2, THO3, THO5, THO6 and THO7.
messages: Developmental defects as well as reduced levels of endogenous trans-acting small interfering RNA (ta-siRNA).
messages: Nucleus

3702:AT2G33860
gene id: 3702:AT2G33860
uniprot id: A0A1P8AZW3
uniprot id: A0A5S9X3R2
uniprot id: O23661
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Involved in the establishment or elaboration of tissue patterning during gynoecial development.
messages: Belongs to the ARF family.
messages: Detected during gynoecium development.
messages: Double mutations in this protein and in ARF4 protein significantly suppresses the adaxial development defect of leaves of the AS2 and RH10 proteins double mutant at high temperatures.
messages: Expressed in the whole plant.
messages: Homo and heterodimers.
messages: Homodimers and heterodimers.
messages: Negatively regulated by AHL21/GIK.
messages: Nucleus

3702:AT1G52190
gene id: 3702:AT1G52190
uniprot id: A0A5S9WP68
uniprot id: Q9M817
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Cell membrane
messages: Expressed in shoots, stems, leaves, flowers and siliques. Mainly detected in larger expanded leaves, in the companion cells of major veins.
messages: Low-affinity nitrate transporter involved in xylem-to-phloem transfer for redistributing nitrate into developing leaves. Not involved in dipeptides transport.
messages: Nrt1.11 and nrt1.12 double mutant is defective in high-nitrate-enhanced growth.

3702:AT4G27460
gene id: 3702:AT4G27460
uniprot id: A0A178V3C0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G52090
gene id: 3702:AT3G52090
uniprot id: A0A178VE18
uniprot id: F4J5R0
uniprot id: Q38859
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA polymerase subunit family.
messages: Component of the RNA polymerase II, IV and V complexes. Interacts with NRPD1, NRPB3 and NRPE3B.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB11 is part of the core element with the central large cleft. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements.
messages: Nucleus

3702:AT4G18510
gene id: 3702:AT4G18510
uniprot id: O49519
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate. May act with CLV1 as a ligand-receptor pair in a signal transduction pathway, coordinating growth between adjacent meristematic regions.
messages: Interacts with the extracellular leucine-rich repeat region of CLV1.
messages: Mostly expressed in roots and seedlings, and, to a lower extent, in apex.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-70 enhances binding affinity of the CLE2p peptide for its receptor.
messages: extracellular space

3702:AT2G23300
gene id: 3702:AT2G23300
uniprot id: O22178
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G37925
gene id: 3702:AT4G37925
uniprot id: A0A178UUC1
uniprot id: Q2V2S7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDH complex subunit M family.
messages: Malfunction of the NDH complex.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits. Component of the NDH subcomplex A, at least composed of ndhH, ndhI, ndhJ, ndhK, ndhL, ndhM, ndhN and ndhO.
messages: chloroplast thylakoid membrane

3702:AT3G54050
gene id: 3702:AT3G54050
uniprot id: A0A654FGI2
uniprot id: P25851
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FBPase class 1 family.
messages: Binds 3 Mg(2+) ions per subunit.
messages: Catalyzes the irreversible reaction from fructose-1,6-bisphosphate to fructose-6-phosphate and inorganic phosphate, to regenerate the primary CO(2) acceptor molecule, ribulose-1,5-bisphosphate (Probable). Involved in the regulation of photosynthetic electron flow and sucrose synthesis (PubMed:15448173, PubMed:20081115). Its activity is critical for normal plant development and important for the regulation of a wide range of metabolic processes (PubMed:25743161).
messages: Homotetramer.
messages: In plants there are two FBPase isozymes: one in the cytosol and the other in the chloroplast.
messages: Light activation through pH changes, Mg(2+) levels and also by light-modulated reduction of essential disulfide groups via the ferredoxin-thioredoxin f system.
messages: Reduced growth rate, dwarf phenotype and delayed flowering.
messages: chloroplast stroma

3702:AT3G13960
gene id: 3702:AT3G13960
uniprot id: A0A178VGS1
uniprot id: Q8L8A6
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GRF family.
messages: Expressed during the early stages of leaf development and expression decreases with the maturation of the leaf.
messages: Interacts with GIF1.
messages: May be due to intron retention.
messages: Nucleus
messages: Small and narrow leaves.
messages: Strongly expressed in actively growing and developing tissues, such as roots, upper stems, and shoot tips containing the shoot apical meristem (SAM) and flower buds. Also expressed in mature flowers, but weakly expressed in mature stems and leaves.
messages: The QLQ domain and WRC domain may be involved in protein-protein interaction and DNA-binding, respectively.
messages: Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Acts together with GIF1 for the development of appropriate leaf size and shape through the promotion and/or maintenance of cell proliferation activity in leaf primordia.
messages: Transcription activator.

3702:AT3G54650
gene id: 3702:AT3G54650
uniprot id: Q8W104
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Essential protein for male fertility. Component of the SCF(ASK-cullin-F-box) E3 ubiquitin ligase complex SCF(FBL17), which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Enables the switch in cell cycle control leading to male germ cell lineage formation from microspores after meiosis. Targets CDKA-1 inhibitors the degradation specifically in male germ cells (e.g. KRP6 and KRP7) and thus enables CDKA-1 activation and germ cell S-phase progression. Promotes twin sperm cell production and double fertilization.
messages: Expressed in developing pollen.
messages: Expressed transiently in the male germ line after asymmetric division. Present in maturing pollen with highest levels in bicellular pollen.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex. Interacts with SKP1A/ASK1, KRP4, KRP6 and KRP7.
messages: Stabilization of KRP6 and inhibition of germ cell cycle progression leading to male sterility.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G01550
gene id: 3702:AT5G01550
uniprot id: A0A2H1ZE50
names: Similarity
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.

3702:AT5G13700
gene id: 3702:AT5G13700
uniprot id: Q9FNA2
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the flavin monoamine oxidase family.
messages: Binds 1 FAD per subunit.
messages: Cytoplasm
messages: Expressed at very low levels in leaves, stems and inflorescences.
messages: Flavoenzyme involved in polyamine back-conversion (PubMed:16778015, PubMed:20532512, PubMed:21081665, PubMed:26973665). Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine and its acetyl derivatives (PubMed:16778015, PubMed:20532512, PubMed:21081665). Substrate preference is thermospermine > norspermine > spermine > N(1)-acetylspermine (PubMed:16778015, PubMed:21081665). No activity detected when putrescine, spermidine or N(1)-acetylspermidine are used as substrates (PubMed:16778015). Plays an important role in the regulation of polyamine intracellular concentration (Probable) (PubMed:26973665). Involved in the production of hydrogen peroxide in response to salt and cold stresses (PubMed:26973665).
messages: Inhibited by guazatine, N-prenylagmatine and 1,12-diaminododecane.
messages: No visible phenotype of seedlings under normal growth conditions (PubMed:26973665). The double mutants pao1 and pao5 exhibit enhanced tolerance to salt and drought stress (PubMed:26973665).

3702:AT5G13200
gene id: 3702:AT5G13200
uniprot id: A0A178U8V0
uniprot id: A0A1P8BC46
uniprot id: Q9LYV6
names: Similarity
messages: Belongs to the GEM family.

3702:AT3G24020
gene id: 3702:AT3G24020
uniprot id: A0A178V7A9
uniprot id: Q7Y225
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT4G03320
gene id: 3702:AT4G03320
uniprot id: A0A178UWG3
uniprot id: Q9ZQZ9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tic20 family.
messages: Expressed in roots,seeds and non-photosynthetic tissues. Low levels in leaves.
messages: Expressed throughout development.
messages: Involved in protein precursor import into chloroplasts.
messages: Involved in protein precursor import into chloroplasts. Partially redundant with TIC20-I, but not with TIC20-II or TIC20-V.
messages: Membrane
messages: No visible phenotype. Tic20-I and tic20-IV double mutant is embryo lethal.
messages: Part of the Tic complex.
messages: chloroplast inner membrane
messages: chloroplast membrane

3702:AT1G69810
gene id: 3702:AT1G69810
uniprot id: A0A1P8AQG7
uniprot id: A0A654EMM9
uniprot id: Q058I4
uniprot id: Q9CAR4
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT2G41110
gene id: 3702:AT2G41110
uniprot id: P0DH97
uniprot id: P0DH98
uniprot id: Q682T9
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the calmodulin family.
messages: By rain-, wind-, and touch (thigmomorphogenesis).
messages: Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
messages: Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Activates MPK8 in vitro.
messages: Cytoplasm
messages: Interacts with IQM1 (via IQ domain).
messages: Interacts with KCBP and CIP111 (PubMed:10531384, PubMed:11346951). Binds to IQD1 and IQD20 (PubMed:23204523).
messages: Interacts with MPK8 (PubMed:21419340). Binds to ABCG36 (PubMed:26315018).
messages: This protein has four functional calcium-binding sites.
messages: cytoskeleton

3702:AT4G18465
gene id: 3702:AT4G18465
uniprot id: F4JRJ6
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. DDX35 sub-subfamily.
messages: May be involved in pre-mRNA splicing.

3702:AT3G62770
gene id: 3702:AT3G62770
uniprot id: Q93VB2
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat PROPPIN family.
messages: By sucrose and nitrogen starvation and during senescence. By methyl viologen. By salt and osmotic stress. By necrotrophic fungal pathogen B.cinerea. Up-regulated in response to both water stress and hydrotropic stimulation.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14 (By similarity). Interacts with WRKY33.
messages: Cytoplasm
messages: Expressed in roots, stems, flowers and leaves.
messages: Mutant is more sensitive to nutrient deprivation conditions and exhibits an early senescence phenotype. Prevents autophagosome formation during starvation. More sensitive to methyl viologen (oxidative stress) treatment and accumulates a higher level of oxidized proteins compared to wild type. High sensitivity to salt and osmotic/drought stresses. Displays an enhanced resistance to the powdery mildew pathogen G.cichoracearum with mildew-induced cell death and an enhanced resistance to P.syringae DC3000 but shows an enhanced susceptibility to infection with necrotrophic A.brassicicola and B.cinerea pathogens.
messages: Nucleus
messages: Preautophagosomal structure membrane
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy by autophagosome formation during nutrient deprivation, senescence and under abiotic stresses, including oxidative, high salt and osmotic stress conditions. Cooperates with jasmonate- and WRKY33-mediated signaling pathways in the regulation of plant defense responses to necrotrophic pathogens.
messages: The first protein part may form a beta-propeller domain involved in specific binding to phosphatidylinositol 3,5-bisphosphate (PIP2), leading to the association of the protein to the membrane.
messages: Vacuole membrane

3702:AT5G37740
gene id: 3702:AT5G37740
uniprot id: A0A178UGX2
uniprot id: F4K8L6
uniprot id: Q9FHP6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant CAR protein family.
messages: Cell membrane
messages: Dimers and oligomers (By similarity). Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus. Interacts directly with PYR1, PYL1, PYL4, PYL6 and PYL8. Binds phospholipids in a Ca(2+)-dependent manner.
messages: Expressed in roots.
messages: Membrane
messages: Nucleus
messages: Predominantly expressed in the vascular bundle of the primary root and in the cortex of the root upper part. In lateral roots, detected in epidermis and root tips.
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (PubMed:25465408). Binds liposomes in the absence of exogenous Ca(2+), but this activity is enhanced in the presence of Ca(2+) and generates membrane curvature (By similarity).
messages: When associated with disruption in CAR4, CAR5 and CAR9 genes, reduced sensitivity to abscisic acid (ABA) during seedling establishment and root growth regulation.

3702:AT5G17600
gene id: 3702:AT5G17600
uniprot id: Q9LF64
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Expressed in flowers.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G09120
gene id: 3702:AT4G09120
uniprot id: Q9M0R5
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT3G53310
gene id: 3702:AT3G53310
uniprot id: Q8LAV5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G13840
gene id: 3702:AT4G13840
uniprot id: Q9SVM9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant acyltransferase family.
messages: Highly expressed in leaves.
messages: Involved in biosynthesis of the epicuticular wax. Plays a role in very-long-chain fatty acid (VLCFA) biosynthesis and is required for C30 fatty acid elongation in leaf. Despite its classification as a BAHD acyltransferase based on sequence homology, CER26 does not seem to share the catalytic mechanism of the members of the BAHD family.
messages: No visible phenotype under normal growth conditions, but mutant plants have increased levels of C29 alkane and reduced levels of C31 alkane in the rosette leaf wax.
messages: cytosol

3702:AT1G05470
gene id: 3702:AT1G05470
uniprot id: A0A178WIE4
uniprot id: Q9LR47
names: Developmental Stage
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Tissue Specificity
messages: Belongs to the inositol polyphosphate 5-phosphatase family.
messages: Broadly expressed in emerging organs. Mostly localized in procambium of growing organs. Restricted to vascular differentiating cells of young organs.
messages: CVP2 overexpression impairs protophloeme sieve element differentiation and overall root growth. Cvp1 and cvp2 double mutant displays high PtdIns(4,5)P2 levels.
messages: During early stages of embryogenesis, broadly expressed throughout globular and torpedo stages. At late torpedo stage, strongly expressed in developing vascular cells and weakly expressed in surrounding cells. By the walking-stick stage, restricted to incipient vascular cells of the apical loop, the midvein of the cotyledon and the root vasculature. In emerging leaves, strongly expressed in procambium and weakly expressed in areole cells. Limited to developing vascular cells in later stage of leaf development. In roots, expressed in procambium of the elongating zone and in immature vascular cells of the root differentiation zone. During inflorescence development, broadly expressed in young floral buds, and gradually restricted to procambium of cauline leaves, sepals, petals, gynoecia and anthers.
messages: Has phosphatase activity toward PtdIns(4,5)P2 and PtdIns(3,4,5)P3 (PubMed:19473324). Required for the patterning of procambium and during the differentiation of vascular tissues. Acts before the acquisition of preprocambial identity. Seems to be also involved in the abscisic acid (ABA) signaling pathway (PubMed:10559439, PubMed:15100402). Acts redundantly with CVL1 for maintaining vascular continuity (PubMed:19363154, PubMed:25813544). Regulates phosphoinositide-dependent VAN3 localization (PubMed:19473324).
messages: May be due to a competing donor splice site.
messages: Sequencing errors.

3702:AT3G42180
gene id: 3702:AT3G42180
uniprot id: A0A1I9LNV8
uniprot id: Q3EAR7
uniprot id: W8PVC1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: May be involved in cell wall biosynthesis.
messages: Membrane
messages: No visible phenotype.

3702:AT5G48180
gene id: 3702:AT5G48180
uniprot id: Q93XW5
names: Disruption Phenotype
names: Function
names: Miscellaneous
messages: Does not contain the mannose-binding lectin domain present in other members of the family.
messages: No visible phenotype.
messages: Promotes simple nitriles, but not epithionitrile or thiocyanate formation. Converts allylglucosinolate and benzylglucosinolate to their corresponding simple nitriles in the presence of myrosinase.

3702:AT5G44760
gene id: 3702:AT5G44760
uniprot id: Q9FIZ1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCTP family.
messages: Membrane

3702:AT5G04150
gene id: 3702:AT5G04150
uniprot id: A0A1P8BBW3
uniprot id: A0A2H1ZE47
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G03520
gene id: 3702:AT4G03520
uniprot id: Q9SEU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thioredoxin family. Plant M-type subfamily.
messages: Interacts with G6PD1 and G6PD4 (PubMed:21309870). Interacts with PGL3 (PubMed:24008768).
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. May activate NADP-malate dehydrogenase.
messages: chloroplast stroma

3702:AT3G14220
gene id: 3702:AT3G14220
uniprot id: Q9LJP2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT5G59160
gene id: 3702:AT5G59160
uniprot id: A0A384KLS9
uniprot id: B9DHU3
uniprot id: P48482
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPP phosphatase family.
messages: Belongs to the PPP phosphatase family. PP-1 subfamily.
messages: Binds 2 manganese ions per subunit.
messages: Cytoplasm
messages: Interacts with SRK2D/SNRK2.2 and SRK2E/SNRK2.6.
messages: Nucleus
messages: Phosphatase activity is strongly reduced by the protein phosphatase inhibitor 2 (I-2).
messages: Serine/threonine-protein phosphatase that possesses phosphatase activity toward para-nitrophenyl phosphate (pNPP) in vitro.

3702:AT5G57790
gene id: 3702:AT5G57790
uniprot id: A0A178UF18
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38420
gene id: 3702:AT2G38420
uniprot id: Q8L6Y7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G52970
gene id: 3702:AT5G52970
uniprot id: Q9LVV5
names: Subcellular Location Annotation
messages: chloroplast thylakoid lumen

3702:AT5G51990
gene id: 3702:AT5G51990
uniprot id: A0A654GB52
uniprot id: B2BJ26
uniprot id: Q9FJ93
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By high-salt stress, drought stress and abscisic acid (ABA) treatment.
messages: Nucleus
messages: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation.

3702:AT5G44270
gene id: 3702:AT5G44270
uniprot id: Q9FKW1
names: Similarity
messages: Belongs to the TPX2 family.

3702:AT3G24495
gene id: 3702:AT3G24495
uniprot id: Q9SMV7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA mismatch repair MutS family.
messages: Component of the post-replicative DNA mismatch repair system (MMR). Forms the heterodimer MutS gamma (MSH2-MSH7 heterodimer) which binds to DNA mismatches thereby initiating DNA repair. MutS gamma recognizes specifically the T/G single base mismatch, but not trinucleotide insertion-deletion loops (IDL).
messages: Heterodimer consisting of MSH2-MSH7 (MutS gamma).
messages: Nucleus

3702:AT5G23990
gene id: 3702:AT5G23990
uniprot id: A0A178UNE5
uniprot id: A0A1P8B9Z4
uniprot id: A0A384KSB2
uniprot id: Q9FLW2
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ferric reductase (FRE) family.
messages: Cell membrane
messages: Expressed at low levels in roots, shoots, pedicels and inflorescence stems, flowers, sepals, stigmas and anther filaments.
messages: Ferric chelate reductase probably involved in iron reduction in shoots. May participate in the transport of electrons to a Fe(3+) ion via FAD and heme intermediates. May act in iron metabolism in reproductive organs (PubMed:16006655). May function as root surface cupric chelate reductase and participate in the reduction of Cu(2+), for Cu(+) acquisition via Cu(+) transporters in response to copper deficiency (PubMed:22374396).
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated in roots and shoots by iron deficiency and copper deficiency (PubMed:16362328). Induced by copper deficiency in a SPL7-dependent manner (PubMed:22374396).

3702:AT4G19860
gene id: 3702:AT4G19860
uniprot id: Q71N54
names: Similarity
messages: Belongs to the AB hydrolase superfamily. Lipase family.

3702:AT5G54190
gene id: 3702:AT5G54190
uniprot id: A0A178UR02
uniprot id: Q42536
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
messages: Down-regulated by light.
messages: Etiolated seedlings.
messages: Expressed in young seedlings. Not detected in leaves.
messages: Forms large complexes including TOC33, pPORA and OEP161 during pPORA import into plastids at the plastid envelope membrane. Interacts with CPP1 during plastid import (PubMed:25901327).
messages: Lethal under normal growth conditions and light-green stunted plants when grown in presence of sucrose.
messages: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).
messages: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide). PORA may also function as a photoprotectant during the transitory stage from dark to light. Functions in skotomorphogenesis, photomorphogenesis and throughout the plant life under specific light conditions.
messages: The presence of TOC33 is not required for the import of PORA into plastids.
messages: chloroplast

3702:AT4G15733
gene id: 3702:AT4G15733
uniprot id: P82630
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G52580
gene id: 3702:AT3G52580
uniprot id: P42036
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Cytoplasm

3702:AT4G37700
gene id: 3702:AT4G37700
uniprot id: A0A178V1C7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G08600
gene id: 3702:AT1G08600
uniprot id: A0A178VZQ9
uniprot id: F4HW51
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SNF2/RAD54 helicase family.
messages: Involved in transcriptional regulation and chromatin remodeling. Facilitates DNA replication in multiple cellular environments and is required for efficient replication of a subset of genomic loci. Binds to DNA tandem repeat sequences in both telomeres and euchromatin and in vitro binds DNA quadruplex structures. May help stabilizing G-rich regions into regular chromatin structures by remodeling G4 DNA and incorporating H3.3-containing nucleosomes (By similarity). Involved in DNA repair of gamma-irradiation-mediated damages (PubMed:16547115).
messages: Nucleus
messages: Slight sensitivity to gamma-irradiation.
messages: The ADD domain predominantly interacts with histone H3 trimethylated at 'Lys-10'(H3K9me3) (and to a lesser extent H3 mono- or dimethylated at 'Lys-10') and simultanously to histone H3 unmethylated at 'Lys-5' (H3K4me0). The interaction with H3K9me3 is disrupted by the presence of H3K4me3 suggesting a readout of the combined histone H3 methylation state.
messages: telomere

3702:AT3G01460
gene id: 3702:AT3G01460
uniprot id: A0A178VJY9
uniprot id: Q9SGH2
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in leaves, buds, flowers and stems.
messages: Interacts with histone H4.
messages: Nucleus
messages: Over-methylated genomic DNA. Increased shoot branching and reduced transcription of FLC leading to early flowering, associated with a decrease in the acetylation level in histone H3 and H4 of FLC chromatin.
messages: Probable transcriptional regulator that acts as a histone acetyltransferase. Mediates the acetylation of histone H3 and H4 of target loci (e.g. FLC). Involved in an auxin-independent regulation of shoot branching and flowering time.
messages: The methyl-CpG-binding domain (MBD) functions both in binding to methylated DNA and in protein interactions.

3702:AT2G29460
gene id: 3702:AT2G29460
uniprot id: Q9ZW27
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT3G42950
gene id: 3702:AT3G42950
uniprot id: A0A384KX16
uniprot id: Q9M1L0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT2G37250
gene id: 3702:AT2G37250
uniprot id: A0A5S9X4W1
uniprot id: Q9ZUU1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the adenylate kinase family.
messages: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis, adenine nucleotide metabolism and plant growth.
messages: Enhanced root growth and increased amino acid biosynthetis in the light period.
messages: Highly expressed in flowers and at lower levels in roots, leaves and stems.
messages: Monomer.
messages: chloroplast stroma

3702:AT2G24590
gene id: 3702:AT2G24590
uniprot id: A0A178VTR9
uniprot id: Q9SJA6
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family. RSZ subfamily.
messages: Component of the spliceosome.
messages: Extensively phosphorylated on serine residues in the RS domain.
messages: Nucleus
messages: Probably involved in intron recognition and spliceosome assembly.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G09976
gene id: 3702:AT5G09976
uniprot id: A0A654G000
uniprot id: F4KFE5
names: Similarity
messages: Belongs to the brassicaceae elicitor peptide family.

3702:AT3G05180
gene id: 3702:AT3G05180
uniprot id: Q9MAA1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT4G33420
gene id: 3702:AT4G33420
uniprot id: A0A178V4J6
uniprot id: A0A1P8B4A9
uniprot id: Q9SZB9
names: Caution
names: Cofactor
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Up-regulated during leaf development.
messages: Vacuole

3702:AT3G51970
gene id: 3702:AT3G51970
uniprot id: A0A178VK57
uniprot id: Q9SV07
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the wax synthase family.
messages: Increased expression during seed development and as pollen development proceeded from uninucleate microspore to mature pollen.
messages: Involved in the esterification of cycloartenol. Not implicated in the formation of sterol esters in flowers or during seed maturation. Has a substrate preference toward saturated fatty acyl donors (16:0 > 18:0 > 16:1 > 18:1). Does not require triacyglycerols (TAGs) as a fatty acyl donor, and is unable to acylate diacylglycerol to produce TAG.
messages: Membrane
messages: No visible phenotype.

3702:AT1G09240
gene id: 3702:AT1G09240
uniprot id: A0A654E8E3
uniprot id: O80483
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the nicotianamine synthase (NAS)-like family.
messages: Constitutively expressed.
messages: In shoots.
messages: Synthesizes nicotianamine, a polyamine which serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.

3702:AT1G17010
gene id: 3702:AT1G17010
uniprot id: F4I629
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT1G73210
gene id: 3702:AT1G73210
uniprot id: A0A178W4P9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G26900
gene id: 3702:AT4G26900
uniprot id: A0A178UW68
uniprot id: Q9SZ30
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HisA/HisF family.
messages: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain.
messages: In the C-terminal section; belongs to the HisA/HisF family.
messages: chloroplast

3702:AT2G32380
gene id: 3702:AT2G32380
uniprot id: A0A178VSR6
uniprot id: Q9ZV66
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G52580
gene id: 3702:AT1G52580
uniprot id: A0A654EJJ7
uniprot id: Q9SSR0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane
messages: Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis. May function in reproductive organs maturation.

3702:AT2G31250
gene id: 3702:AT2G31250
uniprot id: Q9SJX1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutamyl-tRNA reductase family.
messages: Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
messages: During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA (By similarity).
messages: chloroplast

3702:AT3G24315
gene id: 3702:AT3G24315
uniprot id: A0A5S9XFK8
uniprot id: Q1LYX4
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G02640
gene id: 3702:AT4G02640
uniprot id: A0A1P8B7A6
uniprot id: A0A5S9XPC0
uniprot id: O22763
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Cytoplasm
messages: Expressed in roots, shoots, stems, young leaves, trichomes, hydathodes, siliques, seeds, and flowers, mostly in vascular tissues.
messages: First observed in carpels and seeds at early stages of development, mostly in embryo and, at lower extent, in the endosperm. Accumulates and peaks at maturation. Fade out during late seed development steps, restricted to the inner layer of the seed coat, and, at very low levels, in the mature embryo and the remaining endosperm. Also present in the lignified inner subepidermal layer of the valves. In the anthers, restricted to the connective tissue at pre- and post-dehiscence stages and detected in the vascular tissue of the stamen filament.
messages: Forms a heterodimer with BZIP1, BZIP2, BZIP9, BZIP11, BZIP44, BZIP53 and BZIP63. Interacts with ABI3 and forms a complex made of ABI3, BZIP53 and BZIP10. Binding with LSD1 leads to cytoplasmic retention.
messages: Nucleus
messages: Transcription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321).

3702:AT1G49570
gene id: 3702:AT1G49570
uniprot id: A0A178WK78
uniprot id: Q9FX85
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Expressed in the whole plant, with the highest expression in roots.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT1G18220
gene id: 3702:AT1G18220
uniprot id: Q3ED99
names: Caution
names: Tissue Specificity
messages: Could be the product of a pseudogene. Truncated purine permease that is probably not expressed.
messages: Not detected in seedlings, leaves, embryos or root and shoot meristems.

3702:AT1G03330
gene id: 3702:AT1G03330
uniprot id: A0A178W785
uniprot id: Q1H595
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the snRNP Sm proteins family.
messages: Component of LSM protein complexes, which are involved in RNA processing.
messages: Component of LSM protein complexes, which are involved in RNA processing. Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. The cytoplasmic LSM1-LSM7 complex regulates developmental gene expression by the decapping of specific development-related transcripts. Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs) and is essential for accurate splicing of selected development-related mRNAs through the stabilization of the spliceosomal U6 snRNA. Plays a critical role in the regulation of development-related gene expression.
messages: Component of the heptameric LSM1-LSM7 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM1, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM2 subunit interacts only with its two neighboring subunits, LSM1A or LSM1B and LSM3A or LSM3B (PubMed:23221597). Component of the heptameric LSM2-LSM8 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM8, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM2 subunit interacts only with its two neighboring subunits, LSM8 and LSM3A or LSM3B (PubMed:23221597).
messages: Cytoplasm
messages: Embryonic lethality when homozygous.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Nucleus

3702:AT3G14960
gene id: 3702:AT3G14960
uniprot id: Q9LKA9
uniprot id: W8Q363
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 31 family.
messages: Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT1G17880
gene id: 3702:AT1G17880
uniprot id: Q9SMW7
names: Similarity
names: Subunit
messages: Belongs to the NAC-beta family.
messages: Part of the nascent polypeptide-associated complex (NAC). Interacts with EIF(ISO)4E (PubMed:15716105, PubMed:2320128).

3702:AT4G24470
gene id: 3702:AT4G24470
uniprot id: A0A5S9XVG4
uniprot id: F4JQX4
uniprot id: Q9LRH6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the type IV zinc-finger family. Class C subfamily.
messages: May be due to intron retention.
messages: Nucleus
messages: Predominantly expressed in shoot apices, inflorescences and roots.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

3702:AT1G32230
gene id: 3702:AT1G32230
uniprot id: Q8RY59
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By ozone, salt stress and cadmium.
messages: Expressed in the embryo proper at the globular stage. Expressed in the embryo until the torpedo stage, after which expression within the procambial strands becomes pronounced.
messages: Expressed in young developing tissues, such as young leaves and flowers and root tips. In mature plants, expressed in vasculature of leaves and roots, and guard cells.
messages: Inactive ADP-ribosyltransferase that functions with SRO1 to regulate oxidative stress, hormonal and developmental responses. Required for embryogenesis, vegetative and reproductive development, and abiotic stress responses. May regulate several stress-responsive genes. Seems to play a larger developmental role than SRO1. Does not bind NAD in vitro.
messages: Interacts with the transcription factors NAC013/NTL1 and NAC046 (PubMed:25348421). Interacts with dehydration-responsive DREB2 proteins and a number of transcription factors belonging to several protein families. Interacts with turnip crinkle virus (TCV) movement protein P8.
messages: Lacks the conserved catalytic triad His-Tyr-Glu of the active site.
messages: May be due to a competing acceptor splice site.
messages: Nucleus matrix
messages: Plants overexpressing RCD1 show a weak rcd1 mutant phenotype.
messages: Sequencing errors.
messages: Small plants, altered leaf shape and early flowering. Plants lacking RCD1 show enhanced resistance to methyl viologen, tolerance to freezing and supplementary UV-B irradiation, reduced sensitivity to abscisic acid, ethylene and jasmonate, increased sensitivity to ozone and up-regulation of reactive oxygen species scavenging enzymes.

3702:AT4G17030
gene id: 3702:AT4G17030
uniprot id: A0A654FQ78
uniprot id: O23547
uniprot id: Q0WRS3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family.
messages: Belongs to the expansin family. Expansin-like B subfamily.
messages: Secreted

3702:AT5G38890
gene id: 3702:AT5G38890
uniprot id: A0A654G6B9
uniprot id: A2RVT9
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT5G64700
gene id: 3702:AT5G64700
uniprot id: A0A178UJ13
uniprot id: A0A1P8BGD8
uniprot id: Q9FGG3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT1G25270
gene id: 3702:AT1G25270
uniprot id: Q4PT23
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT3G07525
gene id: 3702:AT3G07525
uniprot id: Q8VZ52
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATG10 family.
messages: E2-like enzyme involved in autophagy. Acts as an E2-like enzyme that catalyzes the conjugation of ATG12 to ATG5. The ATG12-ATG5 conjugates is required for the formation of autophagic vesicles and for the timely progression of senescence and programmed cell death (PCD). Likely serves as an ATG5-recognition molecule. Confers some resistance to nitrogen and carbon starvation. Is also involved in the formation of anthocyanic vacuolar inclusions (AVI). Promotes an autophagic process that constitutes a pro-survival mechanism by controlling the containment of host tissue-destructive microbial infections during necrotrophic pathogen infection, but negatively controls SA-dependent defenses and basal immunity to bacterial infection during biotrophic infection.
messages: Membrane
messages: Mutant atg10-1 cannot form the ATG12-ATG5 conjugate and fails to accumulate autophagic bodies inside the vacuole. Plants are hypersensitive to nitrogen and carbon starvation and initiate senescence and programmed cell death (PCD) more quickly. Reduced anthocyanin levels under anthocyanin-inductive conditions. Development of spreading necrosis upon infection with the necrotrophic fungal pathogen, A.brassicicola, which is accompanied by the production of reactive oxygen intermediates and by enhanced hyphal growth. By contrast, in response to the virulent biotrophic phytopathogen, P.syringae pv. tomato, plants exhibit a marked resistance without spreading necrosis. Enhanced powdery mildew (e.g. G.cichoracearum) resistance.
messages: Slightly induced upon B.cinerea infection.

3702:AT1G47420
gene id: 3702:AT1G47420
uniprot id: Q9SX77
names: Subcellular Location Annotation
names: Subunit
messages: Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.
messages: Mitochondrion inner membrane

3702:AT1G69420
gene id: 3702:AT1G69420
uniprot id: A0A178WF77
uniprot id: Q9C533
names: Caution
names: Developmental Stage
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cell membrane
messages: Cytoplasmic vesicle membrane
messages: Highly expressed during bolting.
messages: Membrane
messages: Palmitoyl acyltransferase.
messages: The DHHC domain is required for palmitoyltransferase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G20208
gene id: 3702:AT2G20208
uniprot id: P82774
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G15700
gene id: 3702:AT3G15700
uniprot id: A0A384LME4
uniprot id: Q9LW09
names: Caution
names: Function
messages: Although strongly related to the NB-LRR family, it is shorter and lacks the LRR repeats that are present in other proteins of the family.
messages: Potential disease resistance protein.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G66210
gene id: 3702:AT1G66210
uniprot id: Q8GWX9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT1G27110
gene id: 3702:AT1G27110
uniprot id: A0A1P8AMR2
uniprot id: B3H577
uniprot id: B3H6Q1
uniprot id: Q5BPZ1
names: Similarity
messages: Belongs to the TTC38 family.

3702:AT3G60490
gene id: 3702:AT3G60490
uniprot id: A0A5S9XMR5
uniprot id: Q9M210
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G28730
gene id: 3702:AT5G28730
uniprot id: F4KA06
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HARBI1 family.
messages: Nucleus

3702:AT2G04560
gene id: 3702:AT2G04560
uniprot id: F4IF99
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LpxB family.
messages: Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses (Potential).
messages: Mitochondrion
messages: No visible phenotype under normal growth conditions, but plants lacking LPXB accumulate high levels of 2,3-diacylglucosamine-1-phosphate and UDP-2,3-diacylglucosamine.

3702:AT2G01740
gene id: 3702:AT2G01740
uniprot id: Q9ZUA2
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G27720
gene id: 3702:AT5G27720
uniprot id: A0A178UIB9
uniprot id: F4K4E3
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the snRNP Sm proteins family.
messages: Binds specifically to the 3'-terminal U-tract of U6 snRNA.
messages: Component of LSM protein complexes, which are involved in RNA processing. Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. The cytoplasmic LSM1-LSM7 complex regulates developmental gene expression by the decapping of specific development-related transcripts. Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs) and is essential for accurate splicing of selected development-related mRNAs through the stabilization of the spliceosomal U6 snRNA. Plays a critical role in the regulation of development-related gene expression.
messages: Component of the heptameric LSM1-LSM7 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM1, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM4 subunit interacts only with its two neighboring subunits, LSM1A or LSM1B and LSM7 (PubMed:23221597). Component of the heptameric LSM2-LSM8 complex that forms a seven-membered ring structure with a donut shape. The LSM subunits are arranged in the order LSM8, LSM2, LSM3, LSM6, LSM5, LSM7 and LSM4 (PubMed:23221597, PubMed:23620288). LSM4 subunit interacts only with its two neighboring subunits, LSM8 and LSM7 (PubMed:23221597).
messages: Cytoplasm
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: LSm subunits form a heteromer with a doughnut shape.
messages: Methylated by PMRT15/SKB1 in response to salt stress or abscisic acid (ABA) treatment.
messages: Nucleus
messages: Severe developmental retardation leading to plant death.

3702:AT4G17780
gene id: 3702:AT4G17780
uniprot id: A0A178V4G5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G55690
gene id: 3702:AT5G55690
uniprot id: Q9FM69
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G14723
gene id: 3702:AT4G14723
uniprot id: Q2V3I3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts primarily as positive regulator of inflorescence growth. Endodermal expression is sufficient for proper inflorescence architecture (PubMed:22474391). Redundantly involved with EPFL6 in procambial development regulation. Controls stomatal patterning. Mediates stomatal development inhibition. TMM (AC Q9SSD1) functions to dampen or block CLL2 signaling. Acts as growth-regulatory ligand for ERECTA family receptors.
messages: Belongs to the plant cysteine rich small secretory peptide family. Epidermal patterning factor subfamily.
messages: Expressed at the base of the apical meristem at 3 days after germination. Not detected in the hypocotyl. Expressed in developing stems soon after bolting, in inflorescence stems and in young siliques.
messages: Interacts with ERECTA.
messages: No visible phenotype. Chal and cll2 double mutants are defective in growth, with a short stature, shortened pedicells and compact inflorescence.
messages: Secreted

3702:AT3G18710
gene id: 3702:AT3G18710
uniprot id: Q9LSA6
names: Function
names: Subunit
messages: Binds to SD129 and SD25.
messages: Functions as an E3 ubiquitin ligase.

3702:AT5G26980
gene id: 3702:AT5G26980
uniprot id: A0A654G4F8
uniprot id: O65359
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the syntaxin family.
messages: Contributes to the regulation of secretory and vacuolar transport pathways in the post-Golgi network, and to the maintenance of the Golgi apparatus and trans-Golgi network (TGN) morphologies (PubMed:22307646). Together with VTI12, required for membrane fusion (PubMed:15919093). Vesicle trafficking protein that functions in the secretory pathway and mediates liposome fusion; the fusion of phospholipid vesicles containing SYP41 and VTI12 is triggered by YKT61 and YKT62 (PubMed:15919093, PubMed:24021022). Required for extracellular resistance responses to a fungal pathogen (PubMed:22307646). Also involved in the protection of chloroplasts from salicylic acid-dependent biotic stress (PubMed:22307646).
messages: Gametophytic lethal in homozygote plants (PubMed:22307646). The double mutant syp41 syp42 have short roots (PubMed:22307646). Plants lacking the three genes SYP41 SYP42 and SYP43 are seedling lethals (PubMed:22307646).
messages: Interacts with VTI12 and SYP61 to form a t-SNARE complex and with VPS45 (PubMed:10888666, PubMed:11739776, PubMed:15919093). Interacts with TNO1 (PubMed:21521696). Binds to YKT61 and YKT62 (PubMed:15919093). Core constituent of the SNARE complex required for membrane fusion at the trans-Golgi network (PubMed:15919093).
messages: Mostly expressed in flowers, to a lower extent in leaves and roots, and, at low levels, in stems.
messages: trans-Golgi network membrane

3702:AT5G64750
gene id: 3702:AT5G64750
uniprot id: A0A178UFQ7
uniprot id: Q9FGF8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By abscisic acid (ABA) and stresses, including cold, drought and salt (PubMed:16227468, PubMed:26961720). Triggered by YY1 (PubMed:26961720).
messages: Negative regulator of the abscisic acid (ABA) signaling pathway involved in seed germination and in responses to stress conditions. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
messages: Nucleus
messages: Ubiquitous with lower levels in seeds and siliques.

3702:AT1G78860
gene id: 3702:AT1G78860
uniprot id: Q9ZVA5
names: Subcellular Location Annotation
messages: Secreted
messages: cell wall

3702:AT5G13300
gene id: 3702:AT5G13300
uniprot id: Q5W7F2
names: Activity Regulation
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: ARF GAP activity strongly enhanced by phosphatidylinositol 4-monophosphate (PIP) and moderately enhanced by phosphatidylinositol 4,5-bisphosphate (PIP2).
messages: Binds to phosphatidylinositol (PI), phosphatidylinositol 4-monophosphate (PIP) and phosphatidylinositol 4,5-bisphosphate (PIP2) but not to phosphatidic acid (PA), phosphatidylcholine (PC) or phosphatidylethanolamine (PE).
messages: Broadly expressed. Detected in developing veins of the leaf and root (PubMed:19473324). Detected in roots, hypocotyls, cotyledons, leaves, siliques and shoot apical meristems (PubMed:16698946).
messages: Expression refined to procambial cells during embryogenesis.
messages: GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Involved in the spatial control of provascular differentiation. Required for the formation of the normal pattern of continuous secondary veins. Involved in auxin signaling but not in polar auxin transport or in auxin responses. Required for PIN1 internalization in roots.
messages: Homodimer (PubMed:15743878). Interacts with DRP1A (PubMed:15923323). Interacts with VAB (PubMed:19363154).
messages: The PH domain is responsive of the binding to phosphoinositol (PubMed:19473324). The BAR domain is required and sufficient for homodimerization (PubMed:15743878).
messages: Up-regulated by auxin.
messages: trans-Golgi network

3702:AT4G05040
gene id: 3702:AT4G05040
uniprot id: Q94A85
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G71860
gene id: 3702:AT1G71860
uniprot id: O82656
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt treatment. Down-regulated by cold.
messages: Expressed in roots, stems and flowers, and at low levels in leaves.
messages: Inhibited by hydrogen peroxide.
messages: Interacts with MPK6 (PubMed:19789277). Interacts with KIN10 (PubMed:27029354).
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Phosphorylated by KIN10.
messages: Protein-tyrosine-phosphatase that dephosphorylates and probably inhibits MPK6 in non-oxidative stress conditions. In association with MKP1, represses salicylic acid (SA) and camalexin biosynthesis, thus modulating defense response. May also repress MPK3. Dephosphorylates and inactivates MPK4 in vitro.
messages: cytosol

3702:AT1G02880
gene id: 3702:AT1G02880
uniprot id: A0A178WKT3
uniprot id: A0A1P8ARA0
uniprot id: B9DGU7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiamine pyrophosphokinase family.
messages: Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate (TPP) (PubMed:17611796). TPP is an active cofactor for enzymes involved in glycolysis and energy production (PubMed:17611796). Plant leaves require high levels of TPP for photosynthesis and carbohydrate metabolism (PubMed:17611796).
messages: Expressed in roots, leaves and flowers.
messages: No visible phenotype under normal growth conditions (PubMed:17611796). Tpk1 and tpk2 double mutants exhibit a seedling lethal phenotype (PubMed:17611796).
messages: cytosol

3702:AT5G42820
gene id: 3702:AT5G42820
uniprot id: Q9FMY5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family.
messages: Component of the spliceosome. Homo- and heterodimer. Interacts with RNU1, U2AF35A and SR45.
messages: Necessary for the splicing of pre-mRNA (By similarity). Probably active at the 3' splice sites.
messages: Nucleus speckle

3702:AT2G30750
gene id: 3702:AT2G30750
uniprot id: A0A5S9X2U8
uniprot id: O49340
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 90% decrease of all indole-3-carbonyl nitrile (ICN) derivatives and increased susceptibility to virulent Pseudomonas syringae.
messages: Belongs to the cytochrome P450 family.
messages: Converts indole-3-acetaldoxime to indole cyanohydrin. Involved in the biosynthetic pathway to 4-hydroxyindole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic metabolite required for inducible pathogen defense.
messages: Membrane

3702:AT2G24000
gene id: 3702:AT2G24000
uniprot id: A6XH04
uniprot id: Q1PF08
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expression not detected.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT5G49980
gene id: 3702:AT5G49980
uniprot id: A0A178UB83
uniprot id: Q9LTX2
names: Caution
names: Domain
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex. May interact with auxin and auxin-responsive proteins (By similarity).
messages: The F-box is necessary for the interaction with SKP1.
messages: The myo-inositol hexakisphosphate acts as a structural cofactor.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G32270
gene id: 3702:AT1G32270
uniprot id: Q9C615
names: Function
names: Similarity
names: Subunit
messages: Belongs to the syntaxin family.
messages: Part of the t-SNARE complex.
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT3G60220
gene id: 3702:AT3G60220
uniprot id: Q9LY41
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G64230
gene id: 3702:AT5G64230
uniprot id: A0A654GE29
uniprot id: F4KDK4
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

3702:AT3G06360
gene id: 3702:AT3G06360
uniprot id: Q9SQT9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: O-glycosylated on the hydroxyproline residues.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT2G01940
gene id: 3702:AT2G01940
uniprot id: F4IPE3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expression levels gradually decrease with aging in both the shoot and root vasculature.
messages: In sgr5-2 and sgr5-3, abnormal inflorescence stems gravitropism but normal hypocotyl and root gravitropism. Slow amyloplasts sedimentation associated with lower amyloplast starch levels. Attenuated stem circumnutation movement. No visible phenotype (PubMed:24039602).
messages: Mainly expressed in the endodermis, the gravity-sensing tissue in inflorescence stems. Mostly present in stems and flowers, and, to a lower extent, in seedlings, hypocotyls, roots and the shoot apical meristem (SAM).
messages: Not regulated by auxin.
messages: Nucleus
messages: Transcription factor involved in inflorescence stems gravitropism, probably by regulating starch accumulation in amyloplasts of graviperceptive cells. Required for stem circumnutation movements. Regulates lateral organ morphogenesis and gravitropic responses (PubMed:24039602). Acts cooperatively with IDD16 to control silique and branche orientation (PubMed:24039602). Involved in the establishment of auxin gradients through the regulation of auxin biosynthesis and transport (PubMed:24039602).

3702:AT5G06905
gene id: 3702:AT5G06905
uniprot id: F4K599
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G19025
gene id: 3702:AT5G19025
uniprot id: A0A178UR00
uniprot id: P0C8Q9
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G14255
gene id: 3702:AT2G14255
uniprot id: Q3EC11
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Expressed in roots, shoots, flowers and pollen.
messages: Golgi apparatus membrane
messages: Palmitoyl acyltransferase.
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT5G38540
gene id: 3702:AT5G38540
uniprot id: A0A1P8BGF4
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT2G28315
gene id: 3702:AT2G28315
uniprot id: A0A178VLE3
uniprot id: A0A1P8B170
uniprot id: F4IHS9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: No visible phenotype. Slight reduction of xylose content in the cell wall composition.
messages: Nucleotide-sugar transporter that transports UDP-xylose and UMP in a strict counter-exchange mode.
messages: Ubiquitous.

3702:AT3G49680
gene id: 3702:AT3G49680
uniprot id: A0A654FG91
uniprot id: B3H658
uniprot id: Q9M401
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Branched-chain amino acids are synthesized in chloroplasts, whereas the degradation takes place in mitochondria.
messages: Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine. Also involved in methionine chain elongation cycle of aliphatic glucosinolate formation. Catalyzes the conversion of 5-methylthiopentyl-2-oxo and 6-methylthiohexyl-2-oxo acids to their respective Met derivatives, homomethionine and dihomo-methionine, respectively.
messages: Diurnally expressed.
messages: Expressed in the phloem cells.
messages: Inhibited by Ser- or Thr-derived imine.
messages: No effect on the levels of free amino acids in seeds, but reduced levels of Val, Ser and Thr in leaves. Increased levels of Met-derived glucosinolates in leaves.
messages: chloroplast

3702:AT1G23000
gene id: 3702:AT1G23000
uniprot id: A2RVM8
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT3G47990
gene id: 3702:AT3G47990
uniprot id: Q8GYT9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: E3 ubiquitin protein ligase that acts as positive regulator of sugar signaling during early seedling development. Possesses E3 ligase activity in vitro.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Membrane
messages: Resistance to high concentrations of exogenous glucose and sucrose on early seedling development.

3702:AT3G19210
gene id: 3702:AT3G19210
uniprot id: Q0PCS3
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SNF2/RAD54 helicase family.
messages: Dissociates RAD51 from nucleoprotein filaments formed on dsDNA. Could be involved in the turnover of RAD51 protein-dsDNA filaments. Addition of RAD54 overcomes inhibition of DNA strand exchange by RAD51 bound to substrate dsDNA. Species preference in the RAD51 dissociation and DNA strand exchange assays underlines the importance of specific RAD54-RAD51 interactions. RAD51 is unable to release dsDNA upon ATP hydrolysis, leaving it stuck on the heteroduplex DNA product after DNA strand exchange (By similarity). Involved in DNA repair and mitotic recombination (PubMed:17227544, PubMed:16547115, PubMed:18430956). Functions in the homologous recombinational DNA repair (RAD52) pathway (PubMed:17227544, PubMed:16547115, PubMed:18430956). Required for synthesis-dependent strand annealing (SDSA) during double-strand break repair (PubMed:22860689).
messages: Expressed ubiquitously, with the highest levels of expression in flower buds. Present in flower buds (at protein level).
messages: Facilitates geminiviral replication (e.g. geminivirus mungbean yellow mosaic virus (MYMV) and tomato leaf curl virus (ToLCV)).
messages: Increased sensitivity to gamma-irradiation and to the cross-linking reagent cisplatin (PubMed:17227544). Reduced efficiency of somatic homologous recombination (HR) (PubMed:17227544, PubMed:16547115). Reduced synthesis-dependent strand annealing (SDSA) frequency (PubMed:22860689). Impaired geminiviral replication (e.g. tomato leaf curl virus (ToLCV)) (PubMed:22171001).
messages: Induced by gamma-irradiation and by heavy ion irradiation (PubMed:17227544, PubMed:22683605). Induced by the genotoxic formaldehyde (FA) (PubMed:20399886). Accumulates in aerial part of low-energy-ion irradiated dormant plant seeds, thus revealing an abscopal mutagenic effect (PubMed:21557702).
messages: Interacts with RAD51 (PubMed:17227544, PubMed:18430956). Binds to the geminivirus mungbean yellow mosaic virus (MYMV) and to the tomato leaf curl virus (ToLCV) replication-associated proteins (PubMed:22171001).
messages: Nucleus

3702:AT2G43800
gene id: 3702:AT2G43800
uniprot id: A0A178VS83
uniprot id: O22824
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the formin-like family. Class-I subfamily.
messages: Membrane
messages: Might be involved in the organization and polarity of the actin cytoskeleton.

3702:AT2G17720
gene id: 3702:AT2G17720
uniprot id: A0A178VTC7
uniprot id: Q24JN5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the P4HA family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Possesses high affinity for leucine-rich repeat and proline-rich extensins of root cell walls that are essential for root hair development. Hydroxyprolines define the subsequent O-glycosylation sites by arabinosyltransferases which elongate the O-arabinosides on extensins.
messages: Endoplasmic reticulum membrane
messages: Expressed in epidermal root hair cells (trichoblasts).
messages: Golgi apparatus membrane
messages: Membrane
messages: Reduced root hair length and content of hydroxyproline in root cell walls.

3702:AT1G54010
gene id: 3702:AT1G54010
uniprot id: Q8W4H8
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Endoplasmic reticulum
messages: Expressed in 10-day-old seedlings.
messages: Expressed mainly in roots.
messages: Involved in the control of the PYK10 complex size and possibly substrate specificity. May be exported from the endoplasmic reticulum upon interaction with MVP1.
messages: Lacks the conserved active site 'GDSL' motif. Its enzyme activity is therefore unsure.
messages: Part of the PYK10 complex. Interacts with MVP1.

3702:AT3G58830
gene id: 3702:AT3G58830
uniprot id: A0A384KLZ2
uniprot id: Q9LXR9
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HAD-like hydrolase superfamily.
messages: In the mature embryo, prominently expressed in the shoot apical meristem (SAM) (PubMed:27541283). In young seedlings, present in hypocotyls and mature part of roots, but not in root tips (PubMed:27541283). Later, also observed in the vasculature of cotyledons, in trichomes of emerging true leaves, and in joint part of the root to shoot (PubMed:27541283). In leaves, accumulates in guard cells and trichomes (PubMed:27541283). In flowers, mainly confined to the stigma of pistils and to the vasculature in the filament of stamens (PubMed:27541283).
messages: Mainly expressed in inflorescences (especially in pollen) and, to a lower extent, in leaves, stems and siliques, as well as, at low levels, in roots (PubMed:27614107). Mostly expressed in hypocotyl, vasculatures, trichomes, guard cells and stigmas (PubMed:27541283).
messages: Mitochondrion
messages: Pale green phenotype with reduced phosphatidylglycerol (PG) and chlorophyll contents but no defect in embryo development (PubMed:27541283, PubMed:27614107). Accumulation of phosphatidylglycerophosphate (PGP) 34:3, PGP 34:2 and PGP 34:1 lacking 16:1 (PubMed:27614107). Strongly reduced amounts of other thylakoid lipids such as monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and sulfoquinovosyldiacylglycerol (SQDG), especially under phosphate deprivation conditions (-P) (PubMed:27614107). Reduced amounts of chlorophyll, but unchanged photosynthetic quantum yield (PubMed:27614107). Altered chloroplasts development (e.g. reduced number of thylakoid membranes) and impaired photosynthetic activity (PubMed:27541283, PubMed:27614107). Reduced mesophyll cells size (PubMed:27614107). Strongly shorter roots associated with a defective order of columella cells in the root apices (PubMed:29476828). Plants lacking PTPMT1, PTPMT2 and PGPP1 have strongly shorter roots associated with a defective order of columella cells in the root apices, with stronger effect than in the single mutant pgpp1-1 (PubMed:29476828).
messages: Phosphatidylglycerophosphate (PGP) phosphatase involved in the biosynthesis of phosphatidylglycerol (PG), a phosphoglycerolipid predominantly present in chloroplastic thylakoid membranes and which has important photosynthetic function; seems to use PGP 34:3, PGP 34:2 and PGP 34:1 as substrates (PubMed:27541283, PubMed:27614107, PubMed:29476828). Required for thylakoid membranes development and chloroplast function (PubMed:27541283, PubMed:27614107). Necessary for normal cell growth (PubMed:27614107). Required for root growth and columella cells organization (PubMed:29476828).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT5G43570
gene id: 3702:AT5G43570
uniprot id: A0A1P8B9R8
uniprot id: F4K626
names: Similarity
messages: Belongs to the protease inhibitor I13 (potato type I serine protease inhibitor) family.

3702:AT2G07702
gene id: 3702:AT2G07702
uniprot id: P93300
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07702) is demonstrated.
messages: Mitochondrion

3702:AT3G02100
gene id: 3702:AT3G02100
uniprot id: Q9SGA8
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT2G40460
gene id: 3702:AT2G40460
uniprot id: A0A5S9X5R5
uniprot id: Q8VZR7
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Down-regulated upon nematode infection.
messages: Expressed in flowers. Detected in stems, leaves and siliques.
messages: Membrane

3702:AT1G04220
gene id: 3702:AT1G04220
uniprot id: A0A178WF97
uniprot id: Q5XEP9
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Expressed in siliques, flowers and stems (PubMed:18465198). In young seedlings, expressed in the central cylinder of primary roots, in emerging lateral roots and in their root cap, but not in aboveground tissues such as hypocotyls, cotyledons and leaves. Expressed in sepals in mature flowers and in the chalaza and micropyle region of developing seeds shortly prior to or just after the detachment from the funiculus (PubMed:18786002). Expressed in roots, flowers, cauline leaves and siliques (PubMed:19619160).
messages: Inhibited by K3 herbicides such as allidochlor, anilofos, cafenstrole and flufenacet (PubMed:15277688). Strongly inhibited by metazachlor (PubMed:22284369).
messages: It is uncertain whether Met-1 or Met-11 is the initiator.
messages: Mediates the synthesis of VLCFAs from 22 to 26 carbons in length (e.g. C22, C24, C26) (PubMed:15277688). Involved in the elongation of C20 fatty acid suberin precursors (PubMed:18786002). Functionally redundant with KCS20 in the two-carbon elongation of C22 fatty acids that is required for cuticular wax and root suberin biosynthesis (PubMed:19619160).
messages: Membrane
messages: No visible phenotype in flowers or siliques, but reduced root growth. Suberin with a significant decrease in VLCFA derivatives longer than C20 (PubMed:18786002). No visible phenotype, but reduced root growth. Kcs2 and kcs20 double mutants have a glossy green appearance due to a significant reduction of the amount of epicuticular wax crystals on the stems and siliques, a significant reduction of C22 and C24 VLCFA derivatives in aliphatic suberin and a roots growth retardation and abnormal lamellation of the suberin layer in the endodermis (PubMed:19619160).
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Up-regulated by wounding, drought and salt (PubMed:18786002). Strongly up-regulated by abscisic acid and drought, and to a lower level, by salt and osmotic stress (PubMed:19619160). Up-regulated by the MYB94 transcription factor (PubMed:25305760).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G38860
gene id: 3702:AT5G38860
uniprot id: A0A1P8BB12
uniprot id: A0A654G651
uniprot id: Q9FMB6
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer (Probable). Interacts with the N-terminus of BZR2/BES1.
messages: Nucleus
messages: Positive brassinosteroid-signaling protein.

3702:AT5G38470
gene id: 3702:AT5G38470
uniprot id: A0A5S9Y9M4
uniprot id: A8MR76
uniprot id: Q84L30
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RAD23 family.
messages: Cytoplasm
messages: Interacts with 'Lys-48'-linked polyubiquitin chains. Interacts with RPN10 via its ubiquitin-like domain.
messages: May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (By similarity).
messages: May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP).
messages: Multiubiquitin chain receptor involved in modulation of proteasomal degradation. Involved in nucleotide excision repair.
messages: No visible phenotype.
messages: Nucleus
messages: Widely expressed in the whole plant.

3702:AT3G03470
gene id: 3702:AT3G03470
uniprot id: A0A654F4W3
uniprot id: Q9SRQ1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Impaired accumulation of non-fluorescent dioxobilin-type chlorophyll catabolites (NDCCs) compensated by higher amounts of non-fluorescent chlorophyll catabolites (NCCs) in senescing leaves.
messages: Involved in the chlorophyll breakdown by its action in nonpolar primary fluorescent chlorophyll catabolite (pFCC) decarbonylation (Ref.6, PubMed:23723324). Involved in the formation of major chlorophyll breakdown products, including non-fluorescent dioxobilin-type chlorophyll catabolites (NDCCs), during leaf senescence (PubMed:23723324).

3702:AT3G54920
gene id: 3702:AT3G54920
uniprot id: A0A178VCI0
uniprot id: Q93Z04
names: Caution
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.
messages: Cell membrane
messages: Expressed equally in mature leaves, buds, flowers, rosettes and roots.
messages: Pmr6 mutations are pleiotropic, indicating that PMR6 plays a unique role in normal plant growth and development. The increased resistance in mutants is not mediated by the constitutive activation of the SA-dependent or the JA/ethylene-dependent defense pathway.
messages: Susceptibility factor required for infection by most powdery mildews, but not by unrelated pathogens. Exact function not known, but clearly affects cell wall composition.
messages: The C-terminal domain not found in other pectate lyase-like protein is required for PMR6 function since the pmr6-2 mutation confers resistance by introducing a frameshift in the mature mRNA which eliminates the C-terminal domain.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G19430
gene id: 3702:AT1G19430
uniprot id: A0A1P8AWE9
uniprot id: A0A654ECS9
uniprot id: Q9LN50
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT5G26810
gene id: 3702:AT5G26810
uniprot id: A0A384KMH9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G54290
gene id: 3702:AT5G54290
uniprot id: F4K0A8
uniprot id: Q9M5P3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DsbD family.
messages: High chlorophyll fluorescence and deficiency in the accumulation of the cytochrome b6f complex subunits. Dwarf due to very slow growth and pale green leaves.
messages: Required for the transfer of reducing equivalents from stroma to thylakoid lumen. Involved in the biogenesis of the plastid cytochrome b6f complex by probably transferring reducing equivalents from stromal m-type thioredoxin (Trx-m) to the lumenal thioredoxin HCF164.
messages: chloroplast thylakoid membrane

3702:AT1G69370
gene id: 3702:AT1G69370
uniprot id: A0A178WB66
uniprot id: Q9C544
names: Activity Regulation
names: Caution
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Allosterically inhibited by tyrosine and phenylalanine (PubMed:10564818). According to another report, seems not to be repressed by tyrosine and phenylalanine (PubMed:25160622). Activated by tryptophan, cysteine and histidine (PubMed:10564818, PubMed:25160622).
messages: Due to contradictory results, it is uncertain whether tyrosine and phenylalanine act as allosteric inhibitors.
messages: Expressed in roots, stems, cauline leaves, flowers and siliques, and at lower levels in rosette leaves.
messages: Homodimer.
messages: May play a role in chloroplast biogenesis.
messages: Not induced by wounding or bacterial pathogen.
messages: chloroplast

3702:AT2G27020
gene id: 3702:AT2G27020
uniprot id: A0A178VXR9
uniprot id: A0A1P8AX55
uniprot id: O23715
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Induced by the endoparasitic nematode M.incognita. Levels increase after infection in both giants cells and endodermal cells of galls. Later confined to giant cells at high levels.
messages: Lethal due to defect in male gametogenesis.
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Ubiquitous low levels.

3702:AT1G34350
gene id: 3702:AT1G34350
uniprot id: A0A5S9WLP5
uniprot id: F4HUY1
uniprot id: Q67Y14
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM18 family.
messages: Membrane

3702:AT4G20670
gene id: 3702:AT4G20670
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT2G45960
gene id: 3702:AT2G45960
uniprot id: A0A384KNK4
uniprot id: A8MRW1
uniprot id: B9DFR9
uniprot id: D9IX99
uniprot id: Q06611
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.
messages: By blue light and abscisic acid (ABA).
messages: Cell membrane
messages: Membrane
messages: Water channel required to facilitate the transport of water across cell membrane. Essential for the water permeability of the plasma membrane and for the morphology of the root system. Its function is impaired by Hg(2+). Inhibited by cytosolic acidosis which occurs during anoxia in roots.
messages: Widely expressed. Expressed in roots and above ground.

3702:AT2G32835
gene id: 3702:AT2G32835
uniprot id: A0A178VUV7
uniprot id: A8MRM1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT1G47490
gene id: 3702:AT1G47490
uniprot id: Q9SX79
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the polyadenylate-binding RBP47 family.
messages: Cytoplasmic granule
messages: Expressed in leaves, stems, flowers, and seedlings.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
messages: Interacts with the poly(A) tail of mRNA in nucleus.
messages: Nucleus

3702:AT5G61605
gene id: 3702:AT5G61605
uniprot id: Q1PDG8
names: Similarity
names: Tissue Specificity
messages: Belongs to the MEG family.
messages: Expressed in stems, leaves and flowers.

3702:AT2G33710
gene id: 3702:AT2G33710
uniprot id: A0A178VY08
uniprot id: F4IFX1
uniprot id: P93007
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT5G48840
gene id: 3702:AT5G48840
uniprot id: Q9FKB3
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the pantothenate synthetase family.
messages: Catalyzes the condensation of pantoate with beta-alanine to form pantothenate. Essential for panthotenate biosynthesis.
messages: Embryonic lethality due to arrest of embryogenesis at the preglobular stage when homozygous.
messages: Enzyme kinetics do not match Michaelis-Menten kinetics, suggesting allosteric behavior. Inhibited by high pantoate levels.
messages: Expressed in roots, cotyledons, leaves, stems, cauline leaves, stigma, sepals and petals.
messages: Homodimer.
messages: cytosol

3702:AT4G22090
gene id: 3702:AT4G22090
uniprot id: O65457
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT4G23590
gene id: 3702:AT4G23590
uniprot id: Q8VYP2
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

3702:AT1G57720
gene id: 3702:AT1G57720
uniprot id: A0A178WGF2
uniprot id: Q9FVT2
names: Caution
names: Function
names: Subunit
messages: EF-1 is composed of four subunits: alpha, beta, delta, and gamma.
messages: Probably plays a role in anchoring the complex to other cellular components.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G18520
gene id: 3702:AT5G18520
uniprot id: A0A5S9Y596
uniprot id: F4JY11
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Abolished Gram-negative bacteria-mediated promotion of root elongation triggered by the N-acyl-homoserine lactones (AHLs) N-3-oxo-hexanoyl-homoserine lactone (3OC6-HSL) and N-3-oxo-octanoyl-homoserine lactone (3OC8-HSL).
messages: Belongs to the LU7TM family.
messages: Induced by the N-acyl-homoserine lactones (AHLs) N-3-oxo-hexanoyl-homoserine lactone (3OC6-HSL) and N-3-oxo-octanoyl-homoserine lactone (3OC8-HSL).
messages: Membrane
messages: Plays a role in plants and microbes interactions (PubMed:22206669). G-protein coupled receptor involved in root growth mediated by the bacterial quorum-sensing signals N-acyl-homoserine lactones (AHLs) (PubMed:18671868, PubMed:22206669).

3702:AT5G10740
gene id: 3702:AT5G10740
uniprot id: A0A178URW2
uniprot id: Q8LAY8
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.

3702:AT2G05220
gene id: 3702:AT2G05220
uniprot id: A0A178VP20
uniprot id: Q9SJ36
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS17 family.

3702:AT5G13320
gene id: 3702:AT5G13320
uniprot id: A0A1P8B9P8
uniprot id: Q9LYU4
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: By P.syringae pv. maculicola and pv. tomato. Induced by PAD4 locally at the infection site and in a salicylic acid-dependent manner systemically.
messages: Catalyzes the conjugation of specific amino acids (e.g. Glu and possibly His, Lys, and Met) to their preferred acyl substrates (e.g. 4-substituted benzoates), in a magnesium ion- and ATP-dependent manner. Can use 4-substituted benzoates such as 4-aminobenzoate (pABA), 4-fluorobenzoate and 4-hydroxybenzoate (4-HBA), and, to a lesser extent, benzoate, vanillate and trans-cinnamate, but not 2-substituted benzoates and salicylic acid (SA), as conjugating acyl substrates. Involved in both basal and induced resistance in a SA-dependent manner. Confers resistance to virulent and avirulent pathogens (at least bacteria and oomycetes), and promotes SA glucosides accumulation. Required for the establishment of hyper-sensitive response (HR) upon incompatible interaction and subsequent systemic acquired resistance (SAR).
messages: Enhanced susceptibility to virulent and avirulent bacterial pathogens P.syringae pv. tomato and pv. maculicola ES4326 with or without DC3000(avrPphB, avrRpt2, avrB, avrRpm1, or avrRps4) as well as to the oomycete pathogen Hyaloperonospora parasitica (downy mildew) isolates Emoy2, Hind4, Hiks1, Wela3, Cand5, and Wand1. Impaired hyper-sensitive response (HR) and systemic acquired resistance (SAR). Compromised salicylic acid glucosides (SAG) accumulation. Resistance is partially rescued by SA treatment.
messages: Expressed in seedlings, mostly in cotyledons, leaves, hypocotyls and sporadically in roots. Not detected in unchallenged adult plants, except in flowers.
messages: Interacts with the P.syringae pv. maculicola effector HopW1-1 (via C-terminus).
messages: Observed in young plants. In flowers, first detected in flower buds at the beginning of the floral stage 13. In petals, levels fade out during flower maturation do disappear at floral opening. Present in sepals and to some extent in stamen and carpel.
messages: Specifically and reversibly inhibited by salicylic acid (SA).

3702:AT4G25990
gene id: 3702:AT4G25990
uniprot id: A0A654FT00
uniprot id: C0SVJ8
uniprot id: Q94KJ2
uniprot id: Q9SZH3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G51660
gene id: 3702:AT5G51660
uniprot id: Q9FGR0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CPSF1 family.
messages: CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction.
messages: Component of the CPSF complex, at least composed of CPSF160, CPSF100, CPSF73-I, CPSF73-II, CPSF30, FY and FIPS5. Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits FY, CPSF30, CPSF73-I, CPSF 73-II and CPSF100.
messages: Nucleus

3702:AT1G24620
gene id: 3702:AT1G24620
uniprot id: Q9FYK2
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT2G34390
gene id: 3702:AT2G34390
uniprot id: A0A178VT16
uniprot id: A0A1P8AYR6
uniprot id: A0A1P8AYX5
uniprot id: A0A1P8AYY0
uniprot id: Q8W037
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA).
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. NIP (TC 1.A.8.12) subfamily.
messages: Endoplasmic reticulum membrane
messages: Low water transport activity in yeast cells.
messages: Membrane
messages: Specifically expressed in roots with high expression in root elongation zone and root stele.

3702:AT1G66080
gene id: 3702:AT1G66080
uniprot id: A0A178W730
uniprot id: Q9C8D7
names: Similarity
messages: Belongs to the OPI10 family.

3702:AT4G09500
gene id: 3702:AT4G09500
uniprot id: Q9M0P3
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT3G45510
gene id: 3702:AT3G45510
uniprot id: Q9M1F6
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT5G58770
gene id: 3702:AT5G58770
uniprot id: A0A384LEU3
uniprot id: B5X0P4
uniprot id: Q56Y11
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.
messages: May be due to an intron retention.

3702:AT2G36160
gene id: 3702:AT2G36160
uniprot id: A0A178VS26
uniprot id: Q9SIH0
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Cytoplasm
messages: Interacts with AAK6.

3702:AT3G26080
gene id: 3702:AT3G26080
uniprot id: A0A1I9LP70
uniprot id: A0A654FAQ0
uniprot id: Q6DBN2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PAP/fibrillin family.
messages: chloroplast thylakoid

3702:AT5G62980
gene id: 3702:AT5G62980
uniprot id: A0A5S9YGG6
uniprot id: Q9FM54
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the DHNA family.
messages: Catalyzes the conversion of 7,8-dihydroneopterin into 6-hydroxymethyl-7,8-dihydropterin, a biosynthetic precursor of the vitamin tetrahydrofolate. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin.
messages: Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin.
messages: Expressed in roots, leaves, stems and siliques.
messages: Homooctamer. Forms a hollow cylinder assembled from two ring-shaped tetramers.

3702:AT4G23640
gene id: 3702:AT4G23640
uniprot id: A0A384KFZ5
uniprot id: Q0WVZ0
uniprot id: Q9FE38
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Detected at very low levels in roots, stems, leaves and flowers of mature plants.
messages: High-affinity potassium transporter required for tip growth of root hairs.
messages: Highly expressed in roots in the early stage of seedlings growth.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Loss-of-function mutation results in the arrest of root hair growth.
messages: Membrane
messages: Potassium transporter.

3702:AT2G26550
gene id: 3702:AT2G26550
uniprot id: A0A178VUD0
uniprot id: A0A1P8B2J8
uniprot id: F4IUL9
uniprot id: F4IUM0
uniprot id: O48722
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the heme oxygenase family.
messages: Lacks the conserved His residue involved in heme iron binding and essential for heme oxygenase activity. Its enzyme activity is therefore unsure.
messages: Probable inactive heme oxygenase. Binds protoporphyrin IX, a precursor for both heme and chlorophyll biosynthesis. Plays a minor role in phytochrome assembly and photomorphogenesis.
messages: Slight reduction in plant size and chlorophyll content, and early flowering.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Widely expressed at low levels.
messages: chloroplast

3702:AT4G28556
gene id: 3702:AT4G28556
uniprot id: Q1G3K8
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in roots, leaves, guard cells, stems, flowers, siliques and pollen.
messages: Functions as downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Functions as downstream effector of active ARAC4/ROP2 GTPase which is involved in the prevention of excessive stomatal opening upon light stimulation. Is involved in pollen tube growth regulation through its interaction with ARAC11/ROP1.
messages: Interacts with ARAC4/ROP2 and ARAC11/ROP1.
messages: Nucleus
messages: Over-expression of RIC7 in tobacco germinating pollen reduces pollen tube elongation.

3702:AT4G39120
gene id: 3702:AT4G39120
uniprot id: Q6NPM8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the inositol monophosphatase superfamily.
messages: Embryo lethality.
messages: Expressed at all developmental stages. Detected in globular to heart stage embryos.
messages: No redundancy with IMPL1 or VTC4.
messages: Phosphatase required for histidine production. Acts also on L-galactose 1-phosphate (L-Gal 1-P), D-myoinositol 3-phosphate (D-Ins 3-P) and D-myoinositol 1-phosphate (D-Ins 1-P).
messages: Ubiquitous. High expression in roots. Expressed in pistil and seed endosperm.
messages: chloroplast

3702:AT3G52730
gene id: 3702:AT3G52730
uniprot id: A0A1I9LS87
uniprot id: A0A384KNL2
uniprot id: Q9LXJ2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UQCR10/QCR9 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 3 respiratory subunits cytochrome b, cytochrome c1 and Rieske protein, 2 core protein subunits, and additional low-molecular weight protein subunits.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT4G15310
gene id: 3702:AT4G15310
uniprot id: A0A654FPK2
uniprot id: F4JJG4
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT1G74720
gene id: 3702:AT1G74720
uniprot id: A0A178W8C8
uniprot id: B8XCH5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCTP family.
messages: Binds Ca(2+) via the C2 domains in absence of phospholipids.
messages: May be involved in Ca 2(+)-dependent signaling and membrane trafficking. Plays a role in fruit dehiscence (Probable). Components of the machinery involved in organ development mediated by the receptor-like kinase STRUBBELIG (SUB) (PubMed:19180193, PubMed:20298225).
messages: Membrane
messages: STRUBBELIG-like (sub-like) mutant (SLM) phenotype characterized by defects in outer integument development, floral organ shape, and stem twisting, as well as cellular defects in the floral meristem and in root hair patterning.

3702:AT3G45980
gene id: 3702:AT3G45980
uniprot id: A0A384KUE9
uniprot id: O23629
uniprot id: Q0WT91
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK6ac, H2BK11ac, H2BK22ac, H2BK27ac H2BK33ac and H2BK34ac.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Mono-, di- or trimethylated at the N-terminus to form H2BA1me1/2/3. H2BA1me2 may be acetylated to form H2BA1me2K6ac and H2BA1me2K6acK11ac.
messages: Monoubiquitinated by BRE1 to form H2BK143ub1 and deubiquitinated by UBP26. Required for heterochromatic histone H3 di- and trimethylation at H3K4me. May give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: Strong up-regulation during the S-phase.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BA1me1/2/3 = mono-, di- and trimethylated Ala-2; H2BK6ac = acetylated Lys-7; H2BK11ac = acetylated Lys-12; H2BK22ac = acetylated Lys-28; H2BK27ac = acetylated Lys-33; H2BK33ac = acetylated Lys-39; H2BK34ac = acetylated Lys-40; H2BK143ub1 = monoubiquitinated Lys-146.

3702:AT5G61740
gene id: 3702:AT5G61740
uniprot id: A0A1P8BFX6
uniprot id: A0A1P8BFX9
uniprot id: Q9FLT4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCA family. CPR flippase (TC 3.A.1.211) subfamily.
messages: Membrane

3702:AT4G24975
gene id: 3702:AT4G24975
uniprot id: Q3E9W6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT5G46000
gene id: 3702:AT5G46000
uniprot id: Q9FNM2
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT2G39710
gene id: 3702:AT2G39710
uniprot id: O22282
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT5G65220
gene id: 3702:AT5G65220
uniprot id: A0A384KI47
uniprot id: B9DH43
uniprot id: Q9FJP3
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL29 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT5G44370
gene id: 3702:AT5G44370
uniprot id: A0A178U9F1
uniprot id: Q9FKV1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Sodium/anion cotransporter (TC 2.A.1.14) family.
messages: Golgi apparatus membrane
messages: Inorganic phosphate and probable anion transporter.
messages: Membrane
messages: Ubiquitous.

3702:AT5G48130
gene id: 3702:AT5G48130
uniprot id: Q9LUB9
names: Domain
names: Function
names: Sequence Caution
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Sequencing errors.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT1G62750
gene id: 3702:AT1G62750
uniprot id: A0A178WCD2
uniprot id: Q9SI75
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
messages: Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Required for the eoplasts redifferentiation into chloroplasts after germination.
messages: Embryo lethality.
messages: Expressed in cotyledons and at lower levels in adult leaves.
messages: chloroplast

3702:AT2G18800
gene id: 3702:AT2G18800
uniprot id: A0A178VQ29
uniprot id: Q9ZV40
names: Caution
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Down-regulated by auxin.
messages: Predominantly expressed in green siliques.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast
messages: cell wall

3702:AT3G16970
gene id: 3702:AT3G16970
uniprot id: Q3EB54
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G34320
gene id: 3702:AT4G34320
uniprot id: A0A178UUT1
uniprot id: Q9SYZ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0496 family.
messages: Membrane

3702:AT2G34660
gene id: 3702:AT2G34660
uniprot id: A0A1P8AZX4
uniprot id: Q42093
names: Activity Regulation
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: By 1-chloro-2,4-dinitrobenzene (CDNB).
messages: Interacts with FKBP42/TWD1 and probably with calmodulin (CaM).
messages: Membrane
messages: Pump for glutathione S-conjugates. Mediates the transport of S-conjugates such as GSH, S-(2,4-dinitrophenyl)-glutathione (DNP-GS), GSSG, cyanidin 3-glucoside-GS (C3G-GS) and metolachlor-GS (MOC-GS), glucuronides such as 17-beta-estradiol 17-(beta-D-glucuronide) (E(2)17betaG), and of the chlorophyll catabolite such as B.napus nonfluorescent chlorophyll catabolite (Bn-NCC-1).
messages: Reciprocal promotion of DNP-GS and E(2)17betaG uptake. E(2)17betaG uptake is also stimulated by GSH and S-methyl-glutathione (S-methyl-GS), and, to a lower extent, by GSSG and C3G-GS. Metolachlor-GS and decyl-GS slightly inhibit E(2)17betaG uptake.
messages: Ubiquitous, at low levels.
messages: Vacuole membrane

3702:AT1G17480
gene id: 3702:AT1G17480
uniprot id: Q2NND9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus
messages: Nucleus envelope
messages: cytoskeleton

3702:AT3G09200
gene id: 3702:AT3G09200
uniprot id: A0A178VHF3
uniprot id: A8MQR4
uniprot id: Q42112
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: P0 forms a pentameric complex by interaction with dimers of P1 and P2.
messages: Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

3702:AT1G04360
gene id: 3702:AT1G04360
uniprot id: P93823
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT4G34050
gene id: 3702:AT4G34050
uniprot id: A0A178V7A4
uniprot id: A0A1P8B3H0
uniprot id: O49499
uniprot id: Q3E6Z1
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family.
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family. CCoAMT subfamily.
messages: Binds 1 divalent metal cation per subunit.
messages: Expressed in stems and roots. Detected in leaves, siliques, flower buds, flowers. Expressed in the tapetum, but not in the endothecium. Detected in the vascular system of leaves and all flower organs, including stigma, stamens, petals and sepals.
messages: Expressed in young flower buds and decreases just before the petals appearance.
messages: Methylates caffeoyl-CoA to feruloyl-CoA. Has a very low activity with caffeic acid and esculetin. Involved in scopoletin biosynthesis in roots.
messages: No visible phenotype, but slightly smaller when grown in short days conditions. 70% and 85% reduction in scopoletin and scopolin levels respectively in the roots. Reduction in global lignin content and in hydroxycinnamic acid amides content in pollen.

3702:AT2G34350
gene id: 3702:AT2G34350
uniprot id: Q0WMV5
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G04020
gene id: 3702:AT4G04020
uniprot id: A0A654FLZ8
uniprot id: O81439
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PAP/fibrillin family.
messages: Expressed in flower buds. Detected in tapetal cells, endothecium and connective in anthers and in subepidermal cells in filaments.
messages: Expressed throughout anther development.
messages: Interacts (via N-terminus) with ABI2.
messages: Probably involved in light/cold stress-related jasmonate (JA) biosynthesis. Contributes to the protection of photosystem II (PSII) against light stress.
messages: Simultaneous down-regulation of PAP1, PAP2 and PAP3 leads to impaired long-term acclimation to environmental constraint, namely photooxidative stress imposed by high light combined with cold.
messages: Up-regulated by abscisic acid.
messages: chloroplast thylakoid
messages: plastoglobule

3702:AT3G61010
gene id: 3702:AT3G61010
uniprot id: F4JD24
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 85 family.
messages: cytosol

3702:AT5G40530
gene id: 3702:AT5G40530
uniprot id: A0A178U9J8
uniprot id: A0A1P8BB29
uniprot id: A0A1P8BB31
uniprot id: F4KHE6
uniprot id: Q84JC0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RRP8 family.
messages: Probable methyltransferase required to silence rDNA.
messages: nucleolus

3702:AT4G28815
gene id: 3702:AT4G28815
uniprot id: A0A1P8B4H3
uniprot id: Q7XHI7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bHLH protein family.
messages: Homodimer.
messages: Nucleus

3702:AT1G74710
gene id: 3702:AT1G74710
uniprot id: A0A178WE28
uniprot id: Q9S7H8
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the isochorismate synthase family.
messages: By pathogen infection. Systemic induction during systemic acquired resistance (SAR). Not induced by light.
messages: Isochorismate synthase involved in the synthesis of salicylic acid (SA) required for both local and systemic acquired resistance (LAR and SAR) while SA synthesized through the phenylalanine ammonium lyase (PAL) pathway seems to potentiate plant cell death. Also involved in phylloquinone (vitamin K1) synthesis. Has no isochorismate pyruvate lyase (IPL) activity.
messages: Leaves.
messages: Monomer.
messages: No visible phenotype; due to the redundancy with ICS2. Nevertheless salicylic acid accumulation upon induction is severely impaired. Ics1 and ics2 double mutant is seedling lethal due to photosynthetic lesions induced by the lack of phylloquinone.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT5G43470
gene id: 3702:AT5G43470
uniprot id: Q8W4J9
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Polymorphism
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the disease resistance NB-LRR family. RPP8/HRT subfamily.
messages: By salicylic acid (SA) (PubMed:22072959, PubMed:20831409). Induced by Hyaloperonospora arabidopsidis, benzothiadiazole (BTH) and wounding (PubMed:20831409). Degraded in darkness and in blue-light (PubMed:20624951).
messages: Cell membrane
messages: Disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. The interaction with TIP (TCV-interacting protein) may be essential for the recognition of the avirulence proteins, and the triggering of the defense response. Triggers resistance to turnip crinkle virus (TCV) via a SAG101-dependent pathway.
messages: Has been shown to exist only in cv. Columbia so far.
messages: In cv. Columbia and cv. Landsberg erecta, RPP8 specifically recognizes the Emco5 avirulence protein from Hyaloperonospora parasitica, while it is not the case in cv. Di-17, where it confers resistance to Turnip Crinkle Virus upon recognition of the viral capsid protein.
messages: Interacts with the NAC protein TIP (PubMed:11041886). Interacts with MORC1/CRT1 (PubMed:18191794, PubMed:20332379). Interacts with COP1 and is subsequently degraded in a 26s proteasome dependent manner (PubMed:20624951).
messages: Mostly expressed in leaves, and, to a lower extent, in roots.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.
messages: The strong polymorphisms present in cv. Di-17 and cv. Columbia are probably due to an unequal crossing-over between the highly related RPP8 and RPH8A genes present in cv. Landsberg erecta. Such variations probably modify the specificity of pathogen recognition.

3702:AT3G55120
gene id: 3702:AT3G55120
uniprot id: A0A654FGW6
uniprot id: P41088
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the chalcone isomerase family.
messages: By light.
messages: Catalyzes the intramolecular cyclization of bicyclic chalcones into tricyclic (S)-flavanones. Responsible for the isomerization of 4,2',4',6'-tetrahydroxychalcone (also termed chalcone) into naringenin.
messages: Mostly expressed in siliques and flowers, and, to a lower extent, in leaves.
messages: Part of the biosynthetic pathway for all classes of flavonoids, a large class of secondary plant metabolites, many of which are brightly colored.

3702:AT1G78220
gene id: 3702:AT1G78220
uniprot id: F4IA59
names: Similarity
messages: Belongs to the 14-3-3 family.

3702:AT1G04150
gene id: 3702:AT1G04150
uniprot id: O64492
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCTP family.
messages: Membrane

3702:AT1G01453
gene id: 3702:AT1G01453
uniprot id: A0A178WIR0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G66780
gene id: 3702:AT1G66780
uniprot id: A0A178W985
uniprot id: F4HQ05
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT5G24860
gene id: 3702:AT5G24860
uniprot id: A0A178UKX8
uniprot id: A0A1P8BBM5
uniprot id: A0A1P8BBN7
uniprot id: O23624
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
messages: After the photoperiodic induction of flowering and in early transition stages, expression is only detectable in the peripheral zone of apical meristems. Later on, it can also be found in floral meristems and in axillary meristems that form secondary inflorescences.
messages: Belongs to the FPF1 family.
messages: Modulates the competence to flowering of apical meristems. Involved in a GA-dependent response in apical meristems during the transition to flowering.
messages: Overexpression of FPF1 results in shortening of the time to flowering.

3702:AT2G01850
gene id: 3702:AT2G01850
uniprot id: A0A5S9WWE7
uniprot id: Q8LDS2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in the immature tracheary elements of rosette leaves. Expressed in differentiating vasculature of the root, the hypocotyls, and the flower filaments, as well as in the anthers and the inner subepidermal layer of mature siliques.
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 3 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity). Required for cell wall modification during the development of tracheary elements.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Expressed in 7 day old seedlings, roots, hypocotyls, rosette leaves, internodes between nodes bearing axillary shoots, nodes bearing flowers, flower buds, anthers and siliques.
messages: In contrast to group 1 and group 2 endotransglucosylase/hydrolase proteins, it may not contain the ligase activity, and may catalyze endohydrolysis xyloglucan polymers only.
messages: In xth27-1 and xth27-2, short-shaped tracheary elements in tertiary veins, reduced number of tertiary veins in the first leaf, and yellow lesion-mimic spots in mature rosette leaves.
messages: apoplast
messages: cell wall

3702:AT4G08950
gene id: 3702:AT4G08950
uniprot id: Q9ZPE7
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the EXORDIUM family.
messages: By the synthetic auxin naphthaleneacetic acid (NAA) and 24-epibrassinolide. Down-regulated by kinetin.
messages: Expressed in root tips, vascular tissue of roots, shoot apex, rosette leaves and embryos.
messages: Over-expression of EXO promotes growth in both shoots and roots.
messages: Reduced leaf size, root length and biomass production due to diminished expansion of epidermis and parenchyma cells.
messages: Required for cell expansion in leaves. May mediate brassinosteroid (BR)-induced leaf growth. May play a role in the control of BR responses in roots. May be involved in signaling processes that coordinate BR responses with environmental or developmental signals.
messages: Secreted
messages: apoplast
messages: extracellular space

3702:AT1G23250
gene id: 3702:AT1G23250
uniprot id: A0A1P8ATG9
uniprot id: F4I4P8
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the caleosin family.
messages: Lipid droplet
messages: The proline-knot motif (79-88) may be involved in targeting to lipid bodies.
messages: Transmembrane regions are predicted by sequence analysis tools, but these regions probably constitute hydrophobic domains associated to phospholipids.

3702:AT1G79720
gene id: 3702:AT1G79720
uniprot id: A0A178W1P1
uniprot id: Q8RX60
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT5G43380
gene id: 3702:AT5G43380
uniprot id: O82733
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PPP phosphatase family. PP-1 subfamily.
messages: Binds 2 manganese ions per subunit.
messages: Cytoplasm
messages: Expressed in roots, rosettes and flowers.
messages: Nucleus
messages: Phosphatase activity is strongly reduced by the protein phosphatase inhibitor 2 (I-2).
messages: Serine/threonine-protein phosphatase that possesses phosphatase activity toward para-nitrophenyl phosphate (pNPP) in vitro.

3702:AT5G09860
gene id: 3702:AT5G09860
uniprot id: Q93VM9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export. Contributes to the integrity of the endogenous trans-acting small interfering RNA (ta-siRNA) pathway. May process or transport a long RNA molecule so that it can be a template for secondary siRNA production. May participate in the trafficking of siRNA precursors to the ARGONAUTE catalytic center. Required for the generation of functional messenger ribonucleoproteins (mRNPs). Plays an important roles in plant innate immunity.
messages: Component of the THO complex, which is composed of THO1, THO2, THO3, THO5, THO6 and THO7.
messages: Developmental defects as well as reduced levels of endogenous trans-acting small interfering RNA (ta-siRNA).
messages: Nucleus

3702:AT1G78172
gene id: 3702:AT1G78172
uniprot id: A0A178WN64
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G69325
gene id: 3702:AT1G69325
uniprot id: A0A178W332
uniprot id: F4I0M0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Belongs to the remorin family.
messages: extracellular space

3702:AT3G57540
gene id: 3702:AT3G57540
uniprot id: A0A654FIN7
uniprot id: Q93YN8
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the remorin family.
messages: Cell membrane
messages: Collaborates with REM4.2 to positively regulate the BCTV and BSCTV susceptibility.
messages: Forms homodimer and heterodimer with REM4.2 (PubMed:25289013). Interacts with KIN11 (PubMed:25289013).
messages: Induced by mannitol, NaCl, drought, as well exogenous abscisic acid (ABA) application.
messages: Phosphorylated by KIN11.
messages: Predominantly detected in bud, stem, root, flower, silique, and leaves, and enhanced dramatically in senescence leaf.
messages: Probably ubiquitinated and degraded by the 26S proteasome pathway.
messages: Slightly reduced susceptibility to Beet Curly Top Virus (BCTV) and Beet Severe Curly Top Virus (BSCTV). The double mutant rem4.1 rem4.2 displays resistance to BCTV and BSCTV.

3702:AT1G19520
gene id: 3702:AT1G19520
uniprot id: A0A654ECT9
uniprot id: Q8LEZ4
uniprot id: Q940Z1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Failure of fusion of the polar nuclei during megagametogenesis.
messages: Mitochondrion
messages: Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus.

3702:AT3G45410
gene id: 3702:AT3G45410
uniprot id: Q9M3D8
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Autophosphorylated on Ser and Thr residues.
messages: By salt and ethylene (ET).
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the fungus Alternaria brassicicola.
messages: Involved in resistance response to the pathogenic fungus Alternaria brassicicola.
messages: Mostly expressed in roots and flowers, and, to a lower extent, in leaves.

3702:AT3G13150
gene id: 3702:AT3G13150
uniprot id: Q9LK58
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G41880
gene id: 3702:AT2G41880
uniprot id: A0A1P8AXL1
uniprot id: A0A1P8AXM7
uniprot id: A0A1P8AXQ4
uniprot id: A0A1P8AXT0
uniprot id: P93757
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the guanylate kinase family.
messages: Essential for recycling GMP and indirectly, cGMP. Required for normal development of the gametophyte and embryo, in association with GK2.
messages: Monomer.
messages: No visible phenotype under normal growth conditions, but the double mutant atgk1 and atgk2 is lethal.

3702:AT5G55310
gene id: 3702:AT5G55310
uniprot id: A0A654GB65
uniprot id: Q9FJ79
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IB topoisomerase family.
messages: Nucleus
messages: Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then rotates around the intact phosphodiester bond on the opposing strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 5'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity). Topoisomerases 1 enzymes (TOP1A and TOP1B) are essential for plant survival (PubMed:12215507).
messages: Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus removing DNA supercoils. Finally, in the religation step, the DNA 5'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.

3702:AT1G65480
gene id: 3702:AT1G65480
uniprot id: A0A178WM09
uniprot id: A0A1P8AMK0
uniprot id: Q9SXZ2
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: An article reported that transcripts can move in the phloem from leaves to shoot apex to induce flowering; however, this paper was later retracted.
messages: Belongs to the phosphatidylethanolamine-binding protein family.
messages: Component of the mobile flower-promoting signal (floral stimulus or florigen). Promotes the transition from vegetative growth to flowering. Required for 'SEPALLATA3' (SEP3) and 'FRUITFULL' (FUL) accumulation in mature rosette leaves. Seems to acts in parallel with 'LEAFY' to induce flowering by regulating 'APETALA1'. Translated in leaves and then transported to the shoot apical meristem where it activates the transcription of several floral meristem identity genes. May play a role in both the autonomous and the long-day flowering pathways.
messages: Cytoplasm
messages: Endoplasmic reticulum
messages: Expression gradually increases with time under both long-day (LD) and short-day (SD) photoperiods. Under LD conditions, expression is first detected on day 4 and plateaued around day 6, preceeding floral commitment around days 9 and 10.
messages: Interacts with FD/BZIP14 and FDP/BZIP27 (PubMed:16099979, PubMed:16099980). Interacts with FTIP1 in phloem companion cells (PubMed:22529749). Interacts with NAKR1 (PubMed:27255839).
messages: Levels follow a circadian cycle with a progressive accumulation during the day time (PubMed:25343985). By light. Expression is delayed and reduced under SD conditions. Repressed by FLC. Up-Regulated by VOZ1 and/or VOZ2 (PubMed:22904146). Up-regulated by APL/FE (PubMed:26239308). Down-regulated by the H3K36me2 modification at the FT locus produced by the interaction between EFM and JMJ30 (PubMed:25132385). Repressed by MYB56 (PubMed:25343985).
messages: Mostly localized in leaves vasculature.
messages: Mutagenesis of Tyr-85 to His converts the activator of flowering 'FLOWERING LOCUS T' into a 'TERMINAL FLOWER 1'-like repressor of flowering.
messages: Nucleus

3702:AT2G15910
gene id: 3702:AT2G15910
uniprot id: A0A384KVY1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G03860
gene id: 3702:AT5G03860
uniprot id: A0A178UKL7
uniprot id: Q9LZC3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the malate synthase family.
messages: Does not seem to be essential for lipid utilization and gluconeogenesis in seedlings.
messages: Expressed from 1 to 5 days after seed imbibition (at protein level).
messages: Glyoxysome
messages: No visible phenotype under normal growth conditions, but the frequency of mutant seedlings to establish into plantlets with true leaves is decreased under short day conditions.

3702:AT3G48670
gene id: 3702:AT3G48670
uniprot id: Q8VZ79
names: Disruption Phenotype
names: Function
names: Subunit
messages: Forms a complex with FDM1/IDNL1 and FDM2/IDNL2 that is required for RNA-directed DNA methylation (RdDM) and that functions at a downstream step of the RdDM pathway (PubMed:22570638, PubMed:22592791) and downstream of small interfering RNA (siRNA) formation (PubMed:22810086). Required for de novo DNA methylation, siRNA accumulation and siRNA-mediated maintenance methylation (PubMed:19915591). Required for several post-transcriptional gene silencing pathways (PubMed:20059743). Binds double-stranded RNAs (dsRNAs) with 5'-overhangs through its XS domain (PubMed:19915591, PubMed:20059743). Binds long non-coding RNA (lncRNA) in an AGO4-dependent manner and associates with DRM2, resulting in DNA methylation of RdDM target loci (PubMed:23246435, PubMed:24862207). Mediates the silencing of a subset of MORC6 target loci (PubMed:27171427).
messages: Interacts with FMD1/IDNL1 (PubMed:22592791). Forms a complex with FMD1/IDNL1 and FMD2/INDL2 (PubMed:22570638, PubMed:22592791). Can form homodimers (PubMed:22570638, PubMed:23246435). Interacts with MORC6 (PubMed:27171427).
messages: Late flowering phenotype (PubMed:22592791) and reduction of DNA methylation at RNA-directed DNA methylation (RdDM) target loci (PubMed:19915591, PubMed:20059743, PubMed:22810086, PubMed:22570638, PubMed:22592791).

3702:AT4G15802
gene id: 3702:AT4G15802
uniprot id: Q8GW48
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HSBP1 family.
messages: Early flowering, short siliques and seed abortion (PubMed:20388662). The seed abortion occurs after fertilization and during embryogenesis (PubMed:20657173). Differential HSP expression, mainly during the recovery from heat shock (HS). Increased seedling survival rates during acquired thermotolerance (AT) tests, but not in response to basal thermotolerance (BT) tests (PubMed:20388662).
messages: Homohexamer (PubMed:20388662). Interacts with HSFA1A, HSFA1B and HSFA2 (PubMed:20388662).
messages: Mostly expressed in siliques and flowers, and, to a lower extent, in roots, stems and leaves.
messages: Negative regulator of the heat shock (HS) response. Affects negatively HSFA1B DNA-binding capacity in vitro (PubMed:20388662). Involved in acquired thermotolerance but not basal thermotolerance (PubMed:20388662). Crucial for seed development, after fertilization and during embryogenesis (PubMed:20388662, PubMed:20657173).
messages: Nucleus
messages: Reversibly induced by heat shock (HS).
messages: cytosol

3702:AT2G31085
gene id: 3702:AT2G31085
uniprot id: A0A178VSR3
uniprot id: Q8S8N3
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate.
messages: Mostly expressed in roots, seedlings, stems and flowers, and, to a lower extent, in apex and siliques.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-76 enhances binding affinity of the CLE6p peptide for its receptor.
messages: extracellular space

3702:AT5G37690
gene id: 3702:AT5G37690
uniprot id: A0A1P8BH21
uniprot id: A0A654G5U1
uniprot id: Q9FHQ1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G07570
gene id: 3702:AT3G07570
uniprot id: Q0WRW8
names: Cofactor
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Binds 2 heme b groups non-covalently.
messages: DOMON domain could bind catecholamines and thereby could regulate the cytochrome b561 domain function (PubMed:15022831). DOMON domain could bind one heme b (PubMed:19386804).
messages: May act as a catecholamine-responsive trans-membrane electron transporter.
messages: Membrane

3702:AT3G12340
gene id: 3702:AT3G12340
uniprot id: F4J9Q6
names: Function
names: Similarity
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).

3702:AT3G25500
gene id: 3702:AT3G25500
uniprot id: A0A178VBY1
uniprot id: Q9SE97
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the formin-like family. Class-I subfamily.
messages: Interacts with FIP2.
messages: Membrane
messages: Might be involved in the organization and polarity of the actin cytoskeleton. Involved in polar pollen cell growth process by maintaining tip-focused cell membrane expansion for the polar extension of pollen tubes.
messages: Up-regulated during gall formation induced by root-knot nematodes.

3702:AT4G18470
gene id: 3702:AT4G18470
uniprot id: Q9SWA6
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulation of DNA damage leading to constitutively activated DNA damage responses (DDR) (PubMed:24207055). Increased basal expression of pathogenesis-related (PR) genes (e.g. PR1) and hypersensitive response (HR) (PubMed:16766691, PubMed:17369431, PubMed:17360504, PubMed:20935179, PubMed:21149701, PubMed:21320694). Chromatin modifications at the PR-1 promoter that mimic induction (e.g. AcH3 and MeH3K4) (PubMed:16766691). Dwarf plants with distorted leaves, reduced root length, early flowering and reduced fertility (PubMed:16766691, PubMed:17360504, PubMed:21320694). Decreased susceptibility to the beet cyst nematode H.schachtii (PubMed:18321188). Mutant plants display enhanced resistance to the bacterial pathogen P.syringae pv. tomato DC3000 (PubMed:22826500). Constitutively elevated levels of somatic homologous recombination (PubMed:17360504). Suppressor of the npr1-1 mutant phenotypes, including systemic acquired resistance (SAR) and normal levels of PR1 restoration (PubMed:10458608, PubMed:20935179).
messages: Component of the SMC5-SMC6 complex, a complex involved in repair of DNA double-strand breaks by homologous recombination (PubMed:24207055). Transcription repressor that prevents expression of pathogenesis-related genes (PR) via histone modifications and binding negative cis-acting elements at their promoters (PubMed:16766691, PubMed:17369431, PubMed:20935179, PubMed:21320694). Negative regulator of hypersensitive response (HR) and systemic acquired resistance (SAR) required to dampen the basal expression of pathogenesis related (PR) genes (PubMed:10458608, PubMed:16766691, PubMed:17360504, PubMed:21149701). Functions synergistically with NTL9/CBNAC as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae (PubMed:22826500). Binds to the PR1 gene promoter to suppress defense response in the absence of pathogen challenge and is removed in response to induction (PubMed:21320694, PubMed:22826500). Regulates negatively both gene expression and DNA recombination during pathogen infection, thus being involved in short-term defense response and a long-term survival strategy (PubMed:17360504). Prevents effective immune responses that involve activation of DNA damage responses, probably by negatively regulating the DNA damage sensors RAD17 and ATR (PubMed:24207055). Negative regulator of defenses against the beet cyst nematode H.schachtii (PubMed:18321188).
messages: Expressed at low levels in the veins.
messages: Interacts with SSN2 (PubMed:21320694). Binds to NTL9/CBNAC to promote its binding to promoters of target genes (PubMed:22826500). Component of the SMC5-SMC6 complex which consists at least of SMC5 and SMC6B. Interacts with RAD17 (PubMed:24207055).
messages: Nucleus

3702:AT1G03950
gene id: 3702:AT1G03950
uniprot id: Q941D5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNF7 family.
messages: Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity).
messages: Component of the endosomal sorting required for transport complex III (ESCRT-III), composed at least of VPS2, VPS20, VPS24 and VPS32.
messages: Endosome

3702:AT2G01600
gene id: 3702:AT2G01600
uniprot id: Q8LBH2
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT4G27140
gene id: 3702:AT4G27140
uniprot id: A0A178UXL9
uniprot id: P15457
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the 2S seed storage albumins family.
messages: The mature protein consists of a small and a large chain linked by disulfide bonds.
messages: This is a 2S seed storage protein.
messages: This is the most abundant isoform of 2S albumin in Arabidopsis.

3702:AT1G54940
gene id: 3702:AT1G54940
uniprot id: A0A384KQH5
uniprot id: Q9FZ37
uniprot id: W8PV93
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Belongs to the glycosyltransferase 8 family. Glycogenin subfamily.
messages: Golgi apparatus membrane
messages: May be involved in the substitutions of the xylan backbone in stem glucuronoxylan.

3702:AT4G31810
gene id: 3702:AT4G31810
uniprot id: A0A178UYS7
uniprot id: Q8RXN4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G43060
gene id: 3702:AT2G43060
uniprot id: Q9SKX1
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Atypical and probable non DNA-binding bHLH transcription factor that acts as transcriptional repressor that negatively regulates cell and organ elongation in response to gibberellin (GA) and brassinosteroid (BR) signaling. Is able to form heterodimer with BHLH49, thus inhibiting DNA binding of BHLH49, which is a transcriptional activator that regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds and inhibits HBI1, a positive regulator of cell elongation that directly binds to the promoters and activated the two expansin genes EXPA1 and EXPA8, encoding cell wall loosening enzymes. The ability of IBH1 to inhibit BHLH49 and HBI1 is counteracted by binding to the antagonist bHLH transcription factor PRE1, restoring the transcriptional activity of BHLH49 and HBI1 and resulting in induction of cell elongation. Functions redundantly with IBL1/BHLH159 in a regulation node known as the incoherent feed-forward loop (FFL) (PubMed:24505057).
messages: Belongs to the bHLH protein family.
messages: Highly expressed in roots and at lower levels in rosette leaves, stems and cauline leaves.
messages: Interacts with PRE1, PRE3, PRE4, PRE5, HBI1, BHLH49, BHLH63, BHLH74, BHLH76 and BHLH77.
messages: No visible phenotype.
messages: Nucleus
messages: Plants over-expressing IBH1 are dwarf with round-shaped, dark-green leaves, short petioles, siliques and roots, and are insensitive to brassinosteroid (PubMed:20009022, PubMed:23161888, PubMed:23221598). Plants silencing IBH1 exhibit increased length of hypocotyls and leaves (PubMed:23161888).
messages: Repressed by epibrassinolide.

3702:AT5G20630
gene id: 3702:AT5G20630
uniprot id: A0A5S9Y5Y3
uniprot id: P94072
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the germin family.
messages: Expressed in leaves and flowers.
messages: Expressed with a circadian rhythm, with peak expression at the beginning of the night.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT3G55250
gene id: 3702:AT3G55250
uniprot id: A0A178VJJ9
uniprot id: Q9M3C6
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with PYG7.
messages: Nuclear genome-encoded factor required for the accumulation of photosystem I (PSI). Functions as PSI biogenesis factor. Cooperates with PYG7 to promote the stable assembly of PSI in the thylakoid membrane. May target primarily the PsaC subunit. Does not seem to be required for the expression of chloroplast genes encoding PSI subunits.
messages: Seedling lethality when homozygous. Pale green and slow growing phenotype when grown on MS medium supplemented with 2% sucrose.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast
messages: chloroplast thylakoid membrane

3702:AT4G30310
gene id: 3702:AT4G30310
uniprot id: A0A1P8B635
uniprot id: A0A5S9XZF4
uniprot id: F4JQ90
uniprot id: F4JQ91
uniprot id: F4JQ92
names: Similarity
messages: Belongs to the FGGY kinase family.

3702:AT2G39090
gene id: 3702:AT2G39090
uniprot id: Q8VY89
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the APC7 family.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication (By similarity).
messages: Nucleus
messages: The APC/C is composed of at least 10 subunits.

3702:ArthCp015
gene id: 3702:ArthCp015
uniprot id: A0A1B1W4U1
uniprot id: P61039
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetN family.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer (By similarity).
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

3702:AT3G15480
gene id: 3702:AT3G15480
uniprot id: A0A384KNR2
uniprot id: Q9LDK1
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10150
gene id: 3702:AT1G10150
uniprot id: A0A178WPT1
uniprot id: Q9SY57
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79610
gene id: 3702:AT1G79610
uniprot id: Q8RWU6
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
messages: Endosome membrane
messages: Expressed in roots, leaves, stems, flowers and siliques. Detected at very low levels in roots and shoots.
messages: Golgi stack membrane
messages: Involved in trafficking to the vacuole (PubMed:21278129). Required for cell proliferation and cell expansion, but not for cell differentiation (PubMed:21278129). Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes (By similarity). May also exchange Li(+) and Cs(+) with a lower affinity (By similarity).
messages: May be due to an intron retention.
messages: No visible phenotype; due to redundancy with NHX5. Nhx5 and nhx6 double mutant has a slower development, is drastically smaller and is salt sensitive.
messages: trans-Golgi network membrane

3702:AT5G11790
gene id: 3702:AT5G11790
uniprot id: A0A178UTF2
uniprot id: A0A1P8BGH7
uniprot id: Q9ASU8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDRG family.
messages: Cytoplasm
messages: Interacts with the heterodimers formed by GB1 and GG1, or GB1 and GG2. Interacts with RGS1.
messages: Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1 (PubMed:19948787). Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL2 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment and maintenance of auxin gradients (PubMed:24223735).

3702:AT2G24762
gene id: 3702:AT2G24762
uniprot id: A0A178VYP3
uniprot id: Q8S8A0
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GLUTAMINE DUMPER 1 (TC 9.B.60) family.
messages: Expressed in the vascular tissues, even in the minor veins of the leaves.
messages: Membrane
messages: Overexpression of GLUTAMINE DUMPER 4 leads to free amino acid levels accumulation (Ref.7, PubMed:20018597).
messages: Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators.
messages: The VIMAG motif is necessary for the function of the protein.

3702:AT4G23010
gene id: 3702:AT4G23010
uniprot id: A0A5S9XVE0
uniprot id: Q29Q28
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nucleotide-sugar transporter family. UDP-galactose:UMP antiporter (TC 2.A.7.11) subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Mostly expressed in roots, and, to a lower extent, in seedlings, shoots, leaves and flowers.
messages: Sugar transporter involved in the transport of UDP-galactose form the cytoplasm into the Golgi apparatus.

3702:AT4G36260
gene id: 3702:AT4G36260
uniprot id: A0A178V2T1
uniprot id: O65517
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SHI protein family.
messages: Expressed in seedlings, roots, cauline leaves, flowers and siliques.
messages: Expressed in the apical parts of the developing gynoecium. In carpels, first observed at late development stage in the most apical parts of the open-ended gynoecium. Accumulates in differentiating style and stigmatic tissues. Not expressed in the stigma after fertilization but remains in the style until full silique maturation. Also detected in anthers. In seedlings, present in the shoot apex and in cotyledons, leaf primordia, stipules, hydathodes and in primordia of lateral roots. Detected in developing trichomes and in leaf and pedicel attachment sites.
messages: No visible phenotype. The double mutant sty1-1 and sty2-1 has a reduction in the amount of stylar and stigmatic tissues and decreased proliferation of stylar xylem, as well as shorter siliques and rosette and cauline leaves with a higher degree of serration. Hypersensitive to 1-N-naphthylphtalamic acid (NPA), but restored by exogenous application of auxin.
messages: Nucleus
messages: Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influence vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM).

3702:AT5G22100
gene id: 3702:AT5G22100
uniprot id: A0A384LMQ2
uniprot id: Q67XN9
uniprot id: Q9C578
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNA 3'-terminal cyclase family. Type 2 subfamily.
messages: Does not have cyclase activity. Plays a role in 40S-ribosomal-subunit biogenesis in the early pre-rRNA processing steps at sites A0, A1 and A2 that are required for proper maturation of the 18S RNA (By similarity).
messages: nucleolus

3702:AT5G59845
gene id: 3702:AT5G59845
uniprot id: A0A178ULB2
uniprot id: Q8LFM2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GASA family.
messages: Expressed in vasculature of rosette leaves and roots, cotyledon and root tips and developing seeds.
messages: Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.
messages: Secreted
messages: Six disulfide bonds may be present.

3702:AT5G56670
gene id: 3702:AT5G56670
uniprot id: A0A178V0S4
uniprot id: A0A384L8A2
uniprot id: P49689
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS30 family.

3702:AT5G55830
gene id: 3702:AT5G55830
uniprot id: A0A178UAJ5
uniprot id: Q9FHG4
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici.
messages: Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G58760
gene id: 3702:AT5G58760
uniprot id: A0A1P8BFU8
uniprot id: A0A5S9YHN1
uniprot id: Q6NQ88
names: Caution
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although the DWD box motif has been suggested to mediate interaction of DDB2 with DDB1A, mutagenesis experiments have to date failed to demonstrate a role for this motif.
messages: Belongs to the WD repeat DDB2/WDR76 family.
messages: Component of the UV-DDB complex, which is composed of DDB1A and DDB2. Interacts with CUL4.
messages: Expressed in roots and flowers. Expressed at low levels in stems.
messages: Induced transiently by UV-B.
messages: Interblade loops of the WD repeat region mediate most of the interaction with DNA. A hairpin between blades 5 and 6 inserts into DNA minor groove and mediates recognition of lesions and separation of the damaged and undamaged strands (By similarity).
messages: May function as the substrate recognition module for a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex including DDB1A and CUL4 (By similarity). Required for DNA repair. Binds to DDB1A to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair (PubMed:18551167). Involved in UV-B tolerance and genome integrity. In association with ATCSA-1, is necessary for repair of UV-B-induced DNA lesions (PubMed:20128879).
messages: Nucleus
messages: The DWD box is required for interaction with DDB1A.

3702:AT1G28270
gene id: 3702:AT1G28270
uniprot id: A0A178WK76
uniprot id: Q9FZA0
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Proteolytically cleaved, probably by S1P, a subtilisin-like serine protease (subtilase).
messages: Secreted

3702:AT1G21810
gene id: 3702:AT1G21810
uniprot id: A0A1P8APB6
uniprot id: Q9SFF4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in preferentially xylem cells.
messages: Belongs to the FPP family.
messages: Ensures, when in complex with FPP3/VETH1 and COG2, the correct secondary cell wall (SCW) deposition pattern by recruiting exocyst components to cortical microtubules in xylem cells during secondary cell wall deposition by recruiting EXO70A1.
messages: Interacts with WPP/MAF proteins (By similarity). Binds to COG2; this interaction promotes the association between cortical microtubules and EXO70A1 (PubMed:25541219).
messages: Vesicle

3702:AT4G29930
gene id: 3702:AT4G29930
uniprot id: A0A1P8B6K8
uniprot id: A0A1P8B6L1
uniprot id: A0A5S9XX49
uniprot id: A0A654FU25
uniprot id: A0A7G2F8J1
uniprot id: Q700E3
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT5G07540
gene id: 3702:AT5G07540
uniprot id: A0A654FZL6
uniprot id: F4K823
uniprot id: Q9LY08
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oleosin family.
messages: In flowers, present in the tapetum.
messages: Inflorescence-specific expression, especially in buds and flowers florets (PubMed:8220457, PubMed:11929861, PubMed:14739246). Present in pollen (at protein level) (PubMed:11431566).
messages: Lipid droplet
messages: Lipid-binding oleosin involved in tapetum development, especially for the physiology of tapetosomes (By similarity). Also implicated in the formation of pollen coat (By similarity).
messages: Membrane
messages: pollen coat

3702:AT5G02540
gene id: 3702:AT5G02540
uniprot id: F4KCF2
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT1G02690
gene id: 3702:AT1G02690
uniprot id: A0A654E7G9
uniprot id: F4HXL3
uniprot id: Q9FWY7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the importin alpha family.
messages: Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (By similarity). Acts as cellular receptor for the nuclear import of the virD2 protein of Agrobacterium, but is not essential for Agrobacterium-mediated root transformation (PubMed:18836040).
messages: Binds to conventional NLS motifs.
messages: Forms a complex with importin subunit beta-1.
messages: Nucleus envelope

3702:AT2G30840
gene id: 3702:AT2G30840
uniprot id: A0A178VQR0
uniprot id: A0A178VSB2
uniprot id: A0A1P8B2L7
uniprot id: A0A384KS69
uniprot id: O80851
names: Caution
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G74800
gene id: 3702:AT1G74800
uniprot id: Q8RX55
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 31 family.
messages: By salt stress.
messages: Expressed in juvenile leaves, stems, cauline leaves and siliques.
messages: Golgi apparatus membrane
messages: Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. Utilizes UDP-galactose solely as sugar donor. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth.
messages: Reduced levels of arabinogalactan proteins (PubMed:26690932). Defects in root hair growth, root elongation, pollen tube growth, flowering time, leaf development, silique length and inflorescence growth. Increased sensitivity to salt stress (PubMed:25974423).

3702:AT3G26800
gene id: 3702:AT3G26800
uniprot id: A0A384L3L0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G22517
gene id: 3702:AT4G22517
uniprot id: A0A178V4W2
uniprot id: A8MQX9
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT5G07390
gene id: 3702:AT5G07390
uniprot id: F4K6P2
uniprot id: O81209
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RBOH (TC 5.B.1.3) family.
messages: Calcium-dependent NADPH oxidase that generates superoxide.
messages: Membrane
messages: Monomer and homodimer.

3702:AT1G55950
gene id: 3702:AT1G55950
uniprot id: Q9LG15
names: Similarity
messages: Belongs to the GeBP family.

3702:AT4G14870
gene id: 3702:AT4G14870
uniprot id: A0A178UZ24
uniprot id: O23342
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecE/SEC61-gamma family.
messages: Involved in the import/insertion pathway in the thylakoids. The signal recognition particle is not involved in the insertion of SECE1 in the thylakoid membrane.
messages: Part of the Sec protein translocation apparatus. Interacts with SCY1 and ALB3.
messages: Seedling lethal. Albino seedlings with yellow and translucent (glassy) lateral organs when grown heterotrophically.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast thylakoid membrane

3702:AT2G48110
gene id: 3702:AT2G48110
uniprot id: F4IN69
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Mediator complex subunit 33 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator.
messages: Component of the Mediator complex.
messages: No visible phenotype.
messages: Nucleus
messages: Ubiquitous.

3702:AT5G39290
gene id: 3702:AT5G39290
uniprot id: Q9FL78
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin A subfamily.
messages: Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Membrane
messages: cell wall

3702:AT5G66450
gene id: 3702:AT5G66450
uniprot id: A0A1P8BFD6
uniprot id: A0A1P8BFE5
uniprot id: Q6NQL6
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PA-phosphatase related phosphoesterase family.
messages: Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a secondary role as PAP in plastids.
messages: Expressed in root tips, root branch points, cotyledons and leaves.
messages: Inhibited by Mg(2+).
messages: Membrane
messages: No visible phenotype under normal growth conditions.
messages: chloroplast inner membrane

3702:AT5G27070
gene id: 3702:AT5G27070
uniprot id: Q7X9N2
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with MEE14/CBP1.
messages: Nucleus
messages: Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction.

3702:AT2G02550
gene id: 3702:AT2G02550
uniprot id: F4IR78
uniprot id: F4IR79
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 5'->3' double-stranded DNA exonuclease which may also possess a cryptic 3'->5' double-stranded DNA exonuclease activity. Functions in DNA mismatch repair.
messages: Belongs to the XPG/RAD2 endonuclease family. EXO1 subfamily.
messages: Binds 2 magnesium ions per subunit. They probably participate in the reaction catalyzed by the enzyme. May bind an additional third magnesium ion after substrate binding.
messages: Nucleus

3702:AT3G29680
gene id: 3702:AT3G29680
uniprot id: Q9LRQ7
names: Induction
names: Similarity
messages: Belongs to the plant acyltransferase family.
messages: Up-regulated by high sucrose and by low phosphate stresses.

3702:AT4G29230
gene id: 3702:AT4G29230
uniprot id: Q9M0F8
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in the vascular cylinder of roots. Expressed in the differentiation zone of the root stele.
messages: Nucleus
messages: Overexpression of NAC075 induces the formation of ectopic xylem vessel-like elements.
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195).

3702:AT3G15810
gene id: 3702:AT3G15810
uniprot id: A0A178VJY6
uniprot id: Q9LVZ8
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

3702:AT4G29140
gene id: 3702:AT4G29140
uniprot id: A0A178UVA9
uniprot id: Q9SZE2
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Endosome membrane
messages: Enhanced resistance to bacterial pathogen PstDC3000 in RNAi mutant.
messages: Expressed in the meristematic regions. Mainly detected in tissues where cells were actively dividing, such as leaf primordia and young leaves, the junction between lateral root and the primary root, root cap, hydathodes, the junction between secondary inflorescence and the main inflorescence, young stamen and young siliques (PubMed:24391508). Highly expressed at the junction between the hypocotyl and the root, and at the marginal areas of cotyledons and true leaves, coinciding with the locations of the hydathode. Also highly expressed at the basal regions of the newly emerged lateral roots. In the floral organs, mostly expressed at the style of the pistil (PubMed:26160579).
messages: Functions as a multidrug and toxin extrusion transporter that negatively regulates plant disease resistance (PubMed:21762165). Plays an important role in maintaining normal plant architecture, possibly by regulating local auxin biosynthesis (PubMed:24391508). May act as a negative regulator of hypocotyl cell elongation in the light (PubMed:26160579).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Late endosome membrane
messages: Membrane
messages: Overexpression of DTX51 alters shoot developmental programs leading to a loss of apical dominance phenotype.

3702:AT3G27010
gene id: 3702:AT3G27010
uniprot id: A0A178VAT1
uniprot id: Q9LSD5
names: Caution
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with PURA1 (PubMed:12631321). Interacts with SPL (PubMed:25527103).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor that binds to the site II motif (3'-TGGGCC/T-5') in the promoter of PCNA-2 and to 3'-GCCCG/A-5' elements in the promoters of cyclin CYCB1-1 and ribosomal protein genes.

3702:AT3G13650
gene id: 3702:AT3G13650
uniprot id: A0A654F6T6
uniprot id: Q9LID5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT3G10370
gene id: 3702:AT3G10370
uniprot id: A0A178VGW1
uniprot id: Q9SS48
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Expressed in germinating seedlings. Also detected in roots, leaves, flowers, developing siliques and germinating seeds.
messages: Mitochondrion inner membrane
messages: Plants lacking SDP6 are impaired in gluconeogenesis during postgerminative growth.
messages: Required for glycerol catabolism and involved in NADH/NAD(+) homeostasis (PubMed:12586344, PubMed:18599644). Essential for postgerminative growth and seedling establishment (PubMed:18599644).

3702:AT1G05065
gene id: 3702:AT1G05065
uniprot id: Q3EDI6
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Expressed specifically in differentiating cells of the root.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Inhibits irreversibly root growth by reducing cell division rates in the root apical meristem (PubMed:20697738). Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed in roots, seedlings, leaves, flowers, stems and apex, and, to a lower extent, in siliques and pollen.
messages: extracellular space

3702:AT4G12890
gene id: 3702:AT4G12890
uniprot id: A0A654FNL9
uniprot id: Q0V809
names: Similarity
messages: Belongs to the GILT family.

3702:AT5G60140
gene id: 3702:AT5G60140
uniprot id: Q9FHB0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G48300
gene id: 3702:AT5G48300
uniprot id: A0A178UDC3
uniprot id: P55228
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by 3'phosphoglycerate, inhibited by orthophosphate. Allosteric regulation.
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Heterotetramer.
messages: Leaves.
messages: This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
messages: chloroplast

3702:AT1G01020
gene id: 3702:AT1G01020
uniprot id: A0A1P8ARY9
uniprot id: A0A1P8AS22
uniprot id: F4HQG4
uniprot id: Q5MK24
names: Caution
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARV1 family.
messages: Endoplasmic reticulum membrane
messages: In floral tissues, expressed in pollen grains and fertilized ovules until they develop into seeds, and, at low levels, in the styles. Observed in germinating seedlings, and later confined to shoot and root apical meristems. Accumulates in emerging leaves and in the vascular tissue of adult leaves.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mediator of sterol homeostasis involved in sterol uptake, trafficking and distribution into membranes.
messages: Mediator of sterol homeostasis involved in sterol uptake, trafficking and distribution into membranes. Regulates also the sphingolipid metabolism.
messages: Membrane
messages: Regulates also the sphingolipid metabolism.
messages: Restricted to tissues in which cells are actively dividing or expanding. Mostly expressed in roots and flowers, and, to a lower extent, in stems and leaves.

3702:AT2G18120
gene id: 3702:AT2G18120
uniprot id: A0A1P8AXA0
uniprot id: Q9SI19
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SHI protein family.
messages: Expressed in cotyledon tips, leaf primordia, hydathodes, stipules, and lateral root primordia and weakly at the edges of petals and sepals.
messages: No visible phenotype.
messages: Nucleus
messages: Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM).

3702:AT5G42990
gene id: 3702:AT5G42990
uniprot id: A0A178UL24
uniprot id: Q9FMM0
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT4G30510
gene id: 3702:AT4G30510
uniprot id: Q8H1Q8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat PROPPIN family.
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Expressed in roots, stems, flowers and leaves.
messages: Preautophagosomal structure membrane
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy (By similarity).
messages: The first protein part may form a beta-propeller domain involved in specific binding to phosphatidylinositol 3,5-bisphosphate (PIP2), leading to the association of the protein to the membrane.
messages: Vacuole membrane

3702:AT1G22510
gene id: 3702:AT1G22510
uniprot id: F4I1E4
uniprot id: Q0WWX8
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G46550
gene id: 3702:AT3G46550
uniprot id: A0A5S9XK06
uniprot id: Q9SNC3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: Expressed in all plant organs and tissues, including guard cells in the leaf.
messages: May be a cell surface adhesion protein that is required for normal cell expansion.
messages: Membrane
messages: Up-regulated by abscisic acid, cold and drought treatments, but not by high salt.

3702:AT4G13660
gene id: 3702:AT4G13660
uniprot id: Q9SVP6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the NmrA-type oxidoreductase family. Isoflavone reductase subfamily.
messages: Expressed in roots. Detected in stems.
messages: Forms homodimers.
messages: No significant difference in lariciresinol content (PubMed:18347017). Prr1 and prr2 double mutants show a complete inhibition of lariciresinol biosynthesis (PubMed:18347017).
messages: Reductase involved in lignan biosynthesis (PubMed:18347017). Unlike conventional pinoresinol reductases that can reduce both pinoresinol and lariciresinol, PRR2 shows a strict substrate selectivity for (-)-pinoresinol (PubMed:18347017). No activity with (+)-pinoresinol or lariciresinol (PubMed:18347017). Abstracts the 4R-hydride from the NADPH cofactor during catalysis (PubMed:18347017).

3702:AT3G13235
gene id: 3702:AT3G13235
uniprot id: A0A384L6E9
uniprot id: F4JC86
uniprot id: Q1EBV4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DDI1 family.
messages: Homodimer.
messages: Receptor of ubiquitinated protein targeted to ubiquitin/proteasome-mediated proteolysis (UPP). Relatively weak affinity for both 'Lys-48'- and 'Lys-63'-linked ubiquitin chains with a slight preference for 'Lys-48-'linked chains of three or more ubiquitin units.
messages: cytosol

3702:AT1G09100
gene id: 3702:AT1G09100
uniprot id: A0A178WHJ4
uniprot id: O04019
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AAA ATPase family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: Nucleus
messages: The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.

3702:AT5G15850
gene id: 3702:AT5G15850
uniprot id: A0A5S9Y4H5
uniprot id: O50055
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CONSTANS family.
messages: Expressed throughout development.
messages: Expressed with a circadian rhythm showing a peak at dawn.
messages: Highly expressed in leaves and at lower levels in stems, flowers and siliques. Not detected in roots.
messages: Nucleus
messages: Putative transcription factor that may be involved in the light input to the circadian clock but does not affect flowering time.

3702:AT3G14120
gene id: 3702:AT3G14120
uniprot id: A0A654F721
uniprot id: Q8L748
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the nucleoporin Nup84/Nup107 family.
messages: Functions as a component of the nuclear pore complex (NPC).
messages: Nucleus envelope
messages: Nucleus membrane
messages: Part of the nuclear pore complex (NPC).
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins.
messages: nuclear pore complex

3702:AT5G45670
gene id: 3702:AT5G45670
uniprot id: A0A178UDP5
uniprot id: Q9FK75
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G20120
gene id: 3702:AT1G20120
uniprot id: P0DKJ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT2G17230
gene id: 3702:AT2G17230
uniprot id: Q9SII5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EXORDIUM family.
messages: By brassinolide.
messages: May play a role in a brassinosteroid-dependent regulation of growth and development.
messages: Secreted
messages: apoplast
messages: extracellular space

3702:AT4G04970
gene id: 3702:AT4G04970
uniprot id: Q9S9U0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 48 family.
messages: Cell membrane
messages: Plants develop collapsed and inviable pollen grains.
messages: Required the formation of the callose wall separating the tetraspores (interstitial wall), but not for the callose wall surrounding the pollen mother cells (peripheral wall). Functionally redudant to CALS12 (GSL5). During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.
messages: Ubiquitous.

3702:AT3G14040
gene id: 3702:AT3G14040
uniprot id: A0A384KJF4
uniprot id: Q9LVJ4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G46640
gene id: 3702:AT5G46640
uniprot id: A0A7G2FKM2
uniprot id: Q9FIR1
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT2G28670
gene id: 3702:AT2G28670
uniprot id: A0A2H1ZE31
uniprot id: Q9SIA8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism (By similarity). Regulates suberin accumulation in roots.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: In flowers, localized to vasculature of the stamen filament, in anthers and papillar cells of the stigma. In siliques, mostly expressed in the abscission zone.
messages: In roots, mostly detected in root endodermis and quiescent center, and, to a lower extent, in root stele and cortex. Expressed in root vascular cylinder, flowers, siliques, cotyledon and leaf veins, and leaf margins. Present in the basal region of rosette leaf trichomes and in developing xylem.
messages: Increased root suberin accumulation characterized by an increased aliphatic monomer content in suberin. Reduced day time transpiration rates and increased water-use efficiency during the vegetative growth period. Decreases in the accumulation of Ca, Mn, and Zn and increases in the accumulation of Na, S, K, As, Se, and Mo in the shoot.
messages: apoplast

3702:AT1G73680
gene id: 3702:AT1G73680
uniprot id: Q9C9U3
names: Developmental Stage
names: Function
names: Similarity
names: Tissue Specificity
messages: Accumulates progressively during senescence induced by detachment of leaves. In flowers, expressed in anthers and ovules prior to fertilization, and in siliques, present in developing seeds.
messages: Alpha-dioxygenase that catalyzes the primary oxygenation of fatty acids into oxylipins. May be involved in the senescence process.
messages: Belongs to the peroxidase family.
messages: Expressed in seedlings (cotyledons, young leaves, and hypocotyls), flowers, siliques and old leaves.

3702:AT5G18040
gene id: 3702:AT5G18040
uniprot id: Q9FJF8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the heat induced plant HTT protein family.
messages: Cytoplasm
messages: Expressed ubiquitously, including in seedlings, leaves, stems, inflorescences and siliques.
messages: Mediates both basal and acquired thermotolerance via HSFA1s-directed pathways (e.g. HSFA1A, HSFA1B, and HSFA1D). Triggers the expression of HSFA1A and HSFA1B.
messages: Nucleus
messages: Target of TAS1 (trans-acting siRNA precursor 1)-derived small interfering RNAs in response to temperature variations, thus reducing both basal and acquired thermotolerance (PubMed:24728648, PubMed:20622450). Up-regulated by cold (at 4 degrees Celsius) (PubMed:20622450). Repressed by trans-acting small interfering RNA (ta-siRNAs) siR850/siRNA255-mediated transcript cleavage (PubMed:16889646, PubMed:18753245). Highly up-regulated in seedlings exposed to heat shock. Induced by HSFA1s-mediated (e.g. HSFA1A, HSFA1B, and HSFA1D) promoter activation (PubMed:24728648).

3702:AT4G04870
gene id: 3702:AT4G04870
uniprot id: Q93YW7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Catalyzes the synthesis of cardiolipin (CL) (diphosphatidylglycerol) by specifically transferring a phosphatidyl group from CDP-diacylglycerol to phosphatidylglycerol (PG). Cannot catalyze the phosphatidyl group transfer from one PG molecule to another to form CL. Possesses high activity with PG species carrying dioleoyl groups and low activity with species carrying one or two palmitoyl groups. CL is a key phospholipid in mitochondrial membranes and plays important roles in maintaining the functional integrity and dynamics of mitochondria under both optimal and stress conditions. In mitochondrial fission, CL stabilizes the protein complex of the major mitochondrial fission factors, DRP3A and DRP3B.
messages: Mitochondrion inner membrane
messages: Strong dwarf phenotype, small siliques with only a few small-sized and sterile seeds, when grown in long day conditions under low light. Dysfunction of mitochondria: abnormal ultrastructure, reduced content of respiratory complex I/complex III supercomplexes and marked accumulation of tricarboxylic acid cycle derivatives and amino acids.

3702:AT1G12650
gene id: 3702:AT1G12650
uniprot id: A0A178WN08
uniprot id: Q8W1E4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Associates with 90S and pre-40S pre-ribosomal particles.
messages: Belongs to the RRP36 family.
messages: Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway.
messages: nucleolus

3702:AT1G73607
gene id: 3702:AT1G73607
uniprot id: A0A384KLF6
uniprot id: A7REG4
uniprot id: P82779
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G30200
gene id: 3702:AT4G30200
uniprot id: Q9SUM4
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By cold (e.g. 4 degrees Celsius). Levels follow a diurnal regulation with an accumulation during the dark period and reduced levels upon exposure to light (at protein level).
messages: Delayed flowering in short days but not in long days conditions, associated with high expression of MAF5, a floral repressor, due to a reduced H3K9me2 status of MAF5 locus.
messages: Maybe involved in both the vernalization and photoperiod pathways by regulating gene expression. Binds preferentially to dimethylated histone H3 'Lys-9' (H3K9me2). Promotes flowering in non-inductive photoperiods (e.g. short days) through the maintenance of the epigenetically repressed state of MAF5 via H3K9me2 and plant homeodomain / polycomb repressive complex 2 (PHD-PRC2)-dependent H3K27me3.
messages: Nucleus
messages: Self-interacts. Interacts with VIN3 and VIL1. Component of the plant homeodomain / polycomb repressive complex 2 (PHD-PRC2) large complex during prolonged cold, composed of core PRC2 components (VRN2, EZA1, FIE and MSI1), and three related PHD finger proteins (VIL1, VIL2 and VIN3) that mediates histone H3 trimethylation on 'Lys-27' (H3K27me3).

3702:AT3G60370
gene id: 3702:AT3G60370
uniprot id: Q0WRJ7
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FKBP-type PPIase family.
messages: Interacts in vitro with LTO1.
messages: PPIase activity is unaffected on reduction.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Involved in the accumulation of the PSII complex.
messages: chloroplast thylakoid lumen

3702:AT1G27930
gene id: 3702:AT1G27930
uniprot id: A0A178WG29
uniprot id: Q9C7F9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the methyltransferase superfamily.
messages: Binds to the translation initiation factors TIF3E1.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT1G32530
gene id: 3702:AT1G32530
uniprot id: A0A178WER4
uniprot id: Q8RX22
names: Caution
names: Subunit
messages: Interacts (via C-terminal domain) with MND1 and HOP2. Interacts with XRI1 (via C-terminal domain).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G16640
gene id: 3702:AT4G16640
uniprot id: A0A7G2EXZ2
uniprot id: O23507
names: Activity Regulation
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase M10A family. Matrix metalloproteinases (MMPs) subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Cell membrane
messages: Inhibited by human TIMP-1 and TIMP-2 and by the peptide hydroxamate inhibitor (BB-94) (PubMed:10574937). Repressed by acetohydroxamic acid (AHA) (PubMed:24156403).
messages: Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (PubMed:10574937). Can cleave myelin basic protein as well as fluorigenic peptide substrates, McaPLANvaDpaAR-NH(2) and McaPChaGNvaHADpa-NH(2) 4-fold more efficiently than McaPLGLDpaAR-NH(2) (QF24) (PubMed:10574937). Active on myelin basic protein (MBP) and, to some extent, on McaPLGLDpaAR-NH(2) (QF24) and beta-casein (PubMed:24156403).
messages: Mostly expressed in flowers, roots and stems, and, to a lower extent, in leaves.
messages: The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme.

3702:AT5G53160
gene id: 3702:AT5G53160
uniprot id: A0A178UJN3
uniprot id: F4KJ16
uniprot id: Q9FGM1
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Down-regulated by abscisic acid (ABA).
messages: Membrane
messages: Monomer (PubMed:21658606). Homodimer. Binds ABA on one subunit only (By similarity). interacts with ABI1 and HAB1, and possibly with other PP2Cs (PubMed:19624469, PubMed:19769575, PubMed:19874541). Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus. Interacts directly with CAR1 and CAR4 (PubMed:25465408). Interacts with MYB44, MYB73 and MYB77 in an ABA-independent manner (PubMed:24894996). Interacts with DDA1 (PubMed:24563205). Interacts with CARK1 in the cytosol (PubMed:29928509). Binds to ABI1 when phosphorylated by CARK1 (PubMed:29928509, PubMed:19624469, PubMed:19769575, PubMed:19874541, PubMed:21658606, PubMed:24563205, PubMed:24894996, PubMed:25465408) (By similarity). Interacts with AIP1 in the nucleus (PubMed:22404835).
messages: No visible phenotype under normal growth conditions, but mutant seedlings exhibit enhanced sensitivity of lateral root inhibition by abscisic acid (ABA), and reduced suppression of primary root growth by ABA.
messages: Nucleus
messages: Phosphorylated by CARK1 especially in response to abscisic acid (ABA); this phosphorylation promotes its stability and inhibitory ability to ABI1.
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) in an ABA-independent manner but more efficiently when activated by ABA. Confers enhanced sensitivity to ABA (PubMed:19407143, PubMed:19624469, PubMed:19769575, PubMed:19889877, PubMed:23844015, PubMed:21658606). Can be activated by both (-)-ABA and (+)-ABA (PubMed:23844015). Mediates crosstalk between ABA and auxin signaling to regulate lateral root growth. Required for lateral root growth suppression by ABA. In response to auxin, promotes lateral root growth by enhancing MYB77-dependent transcription of the auxin-responsive gene IAA19. Enhances the abilities of MYB44 and MYB73 to activate IAA19 gene (PubMed:24894996).
messages: Ubiquitinated in DDA1- and CDD complex-dependent manner (PubMed:24563205). Ubiquitination leads to its subsequent proteasomal degradation (PubMed:24563205).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.
messages: cytosol

3702:AT3G11710
gene id: 3702:AT3G11710
uniprot id: A0A178VAG3
uniprot id: Q9ZPI1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA (By similarity). Promotes aminoacylation of non-cognate tRNAs and translational recoding of lysine at nonsense codons (PubMed:17425721).
messages: cytosol

3702:AT5G01230
gene id: 3702:AT5G01230
uniprot id: A0A654FX87
uniprot id: Q8GUN8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. TRM7 subfamily.
messages: Cytoplasm
messages: Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.

3702:AT3G29630
gene id: 3702:AT3G29630
uniprot id: Q9LJA6
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G60010
gene id: 3702:AT1G60010
uniprot id: A0A178W2T9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G34180
gene id: 3702:AT4G34180
uniprot id: A0A178V1W8
uniprot id: Q93V74
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a negative regulator of fumonisin B1- and pathogen-induced programmed cell death (PCD), and regulates pathogen-induced symptom development (PubMed:25862728). May function redundantly with CYCLASE2 for normal plant growth, development and viability (Probable).
messages: Belongs to the Cyclase 1 superfamily.
messages: Induced by salicylate.
messages: No visible phenotype under normal growth conditions, but leaves of mutant plants exhibit a severly increased cell death when exposed to fumonisin B1 or a bacterial pathogen that triggers the defensive hypersensitive cell death. The double mutants cyclase1 and cyclase2 are embryonic lethal.
messages: extracellular matrix

3702:AT2G41690
gene id: 3702:AT2G41690
uniprot id: O22230
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family. Class B subfamily.
messages: Cytoplasm
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT5G40410
gene id: 3702:AT5G40410
uniprot id: A0A5S9Y9K3
uniprot id: Q9FND6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Mitochondrion

3702:AT5G63600
gene id: 3702:AT5G63600
uniprot id: A0A654GDP9
uniprot id: F4KAS3
uniprot id: Q9FFQ4
names: Cofactor
names: Disruption Phenotype
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in young seedlings.
messages: No visible phenotype under normal growth conditions.

3702:AT4G36690
gene id: 3702:AT4G36690
uniprot id: A0A178UVY6
uniprot id: A0A178UXU1
uniprot id: A0A178UYD2
uniprot id: F4JQG2
uniprot id: O23212
names: Caution
names: Domain
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family.
messages: Component of the spliceosome (Probable). Interacts with SUA (PubMed:20525852). Interacts with SF1 in the nucleus (PubMed:24580679).
messages: May be due to a competing acceptor splice site.
messages: May be due to intron retention.
messages: N-terminal RS domain has a very strong bias in favor of D over S.
messages: Necessary for the splicing of pre-mRNA.
messages: Nucleus
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G10940
gene id: 3702:AT3G10940
uniprot id: Q9SRK5
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed with a circadian rhythm showing a peak at the end of the day and then decreasing to reach the lowest levels at the end of the night.
messages: No visible phenotype under normal growth conditions, but starch of mutant plants contains high levels of C3-bound phosphate.
messages: Starch-associated phosphoglucan phosphatase that selectively dephosphorylates the glucan C3 position. Probably participates in the regulation of starch degradation.
messages: Widely expressed.
messages: chloroplast

3702:AT4G04370
gene id: 3702:AT4G04370
uniprot id: Q9XE98
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT3G29130
gene id: 3702:AT3G29130
uniprot id: A0A1I9LNV2
uniprot id: F4J1T2
uniprot id: Q9LVP5
names: Similarity
messages: Belongs to the KXD1 family.

3702:AT5G05630
gene id: 3702:AT5G05630
uniprot id: Q9FFL1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Polyamine:cation symporter (PHS) (TC 2.A.3.12) family.
messages: Cell membrane
messages: Cell membrane polyamine/proton symporter involved in the polyamine uptake in cells. Possesses high affinity for spermine and spermidine and lower affinity for putrescine. Transports paraquat, a polyamine analog, and thus confers sensitivity to this chemical which is used as a herbicide.
messages: Expressed in hypocotyls and petioles of cotyledons in 1- to 3-day-old seedlings.
messages: Methyl viologen is the brand name of paraquat. Plants over-expressing RMV1 show hypersensitivity to paraquat (PubMed:22492932).
messages: No visible phenotype under normal growth conditions, but mutant plants show increased tolerance to paraquat.

3702:AT2G32295
gene id: 3702:AT2G32295
uniprot id: A0A654EY47
uniprot id: F4ISV2
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G26200
gene id: 3702:AT4G26200
uniprot id: A0A7G2F3T2
uniprot id: Q9STR4
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: 1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes catalyze the conversion of S-adenosyl-L-methionine (SAM) into 1-aminocyclopropane-1-carboxylate (ACC), a direct precursor of ethylene.
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: By cycloheximide (CHX).
messages: Expressed in roots.
messages: Homodimer and heterodimer. In vivo, the relevance of heterodimerization with other ACS enzymes is however unsure (By similarity). Interacts with XBAT32.
messages: The stability of ACS proteins, and the regulation of such stability, play a central role in ethylene biosynthesis.
messages: Ubiquitinated by XBAT32. Ubiquitination probably leads to its subsequent degradation, thus controlling ethylene production.

3702:AT5G20230
gene id: 3702:AT5G20230
uniprot id: Q07488
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
messages: By dark adaptation. This gives a 20-fold increase in expression.
messages: Cell membrane
messages: Maximum levels are found in 35 day old plantlets when the rosette is mature, consisting of 8-10 fully expanded leaves, and as the floral stem starts to form. This level remains constant during the further life span of the plant.
messages: Probably acts as an electron carrier.

3702:AT1G63150
gene id: 3702:AT1G63150
uniprot id: Q9CAM8
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G57750
gene id: 3702:AT1G57750
uniprot id: Q9FVS9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in the expanding regions of the inflorescence stems, specifically to the epidermal pavement cells, petioles and siliques.
messages: Involved in the formation of secondary alcohols and ketones in stem cuticular wax. Catalyzes the hydroxylation of a methylene unit in the middle of alkane molecules to form secondary alcohols and possibly also a second hydroxylation leading to the corresponding ketones.
messages: No visible phenotype under normal growth conditions, but stem wax of mutant plants are devoid of secondary alcohols and ketones and have increased alkane amounts.

3702:AT1G70740
gene id: 3702:AT1G70740
uniprot id: Q9CAC3
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.

3702:AT2G31990
gene id: 3702:AT2G31990
uniprot id: A0A1P8AZR3
uniprot id: A0A1P8AZT3
uniprot id: Q5XF04
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Expressed in roots, hypocotyls, cotyledons, leaves, stems and sepals.
messages: Functions in xyloglucan synthesis by adding side chains to the xylosylated glucan backbone. Involved in the galactosylation of hemicellulose xyloglucan.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT2G19590
gene id: 3702:AT2G19590
uniprot id: A0A178VXN1
uniprot id: A0A1P8B1D8
uniprot id: Q9ZUN4
names: Caution
names: Cofactor
names: Function
names: Induction
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Enzyme involved in the ethylene biosynthesis. May promote stem elongation by maximizing the extensibility cells, possibly by activating ethylene biosynthesis, in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Upon potassium K(+) and iron deprivation. Induced in leaf blades in low light intensities. Seems repressed by ethylene. Accumulates in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0). Induced in roots by nitric oxide (NO).

3702:AT2G40200
gene id: 3702:AT2G40200
uniprot id: A0A384L9H1
uniprot id: C0SV80
uniprot id: Q9XEF0
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, stems, and flowers.
messages: Homodimer.
messages: Nucleus
messages: Repressed by salicylic acid (SA) treatment.

3702:AT1G54115
gene id: 3702:AT1G54115
uniprot id: A0A178W8Z2
uniprot id: Q9SYG9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/calcium exchanger (CCX) subfamily.
messages: Expressed in roots, leaves, stems, flowers and pollen.
messages: Membrane
messages: Membrane-localized H(+)-dependent K(+) and Na(+) transporter.
messages: No visible phenotype.

3702:AT1G09910
gene id: 3702:AT1G09910
uniprot id: A0A1P8AQL5
uniprot id: F4I2M8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polysaccharide lyase 4 family.
messages: Secreted

3702:AT2G38290
gene id: 3702:AT2G38290
uniprot id: A0A654EZX6
uniprot id: Q9M6N7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: By nitrogen deprivation in roots.
messages: Cell membrane
messages: High affinity ammonium transporter that may play an important role in moving ammonium between the apoplast and symplast of cells throughout the plant. Does not transport methylammonium.
messages: Higher expression in shoots than roots.
messages: Membrane

3702:AT5G20040
gene id: 3702:AT5G20040
uniprot id: A0A654G2Q2
uniprot id: F4K2Q7
uniprot id: Q9C5J6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the IPP transferase family.
messages: Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A). Involved in the cis-type cytokinin biosynthesis.
messages: Cytoplasm
messages: Expressed ubiquitously, with highest expression in proliferating tissues.
messages: No visible phenotype, due the redundancy with IPT2. Often chlorotic.
messages: Not regulated by cytokinin, auxin or nitrate.

3702:AT3G03160
gene id: 3702:AT3G03160
uniprot id: A0A384KI16
uniprot id: Q9M9N5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.

3702:AT2G33790
gene id: 3702:AT2G33790
uniprot id: P93013
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the non-classical AGP family.
messages: Expressed in embryos from the initiation of germination.
messages: No visible phenotype under normal growth conditions, but freshly harvested seeds of mutant plants show reduced seed dormancy.
messages: Over-expression of AGP30 severely affects shoot development.
messages: Proteoglycan required for the timing of seed germination. May function in the abscisic acid (ABA) response.
messages: Specifically expressed in root tips.
messages: cell wall

3702:AT2G30500
gene id: 3702:AT2G30500
uniprot id: Q84VY2
names: Function
names: Similarity
messages: Belongs to the NET family.
messages: Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex.

3702:AT1G78960
gene id: 3702:AT1G78960
uniprot id: A0A1P8AVI0
uniprot id: A0A1P8AVK7
uniprot id: Q8RWT0
names: Function
names: Similarity
messages: Belongs to the terpene cyclase/mutase family.
messages: Multifunctional enzyme that converts oxidosqualene to nine different triterpenes, mainly lupeol, beta-amyrin and alpha-amyrin in a 15:50:30 ratio.

3702:AT5G07630
gene id: 3702:AT5G07630
uniprot id: A0A1P8BG39
uniprot id: F4K836
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RFT1 family.
messages: May be involved in N-linked oligosaccharide assembly.
messages: Membrane

3702:AT2G07724
gene id: 3702:AT2G07724
uniprot id: P93287
names: Miscellaneous
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07724) is demonstrated.
messages: Mitochondrion

3702:AT2G18630
gene id: 3702:AT2G18630
uniprot id: A0A1P8B2P1
uniprot id: A0A5S9WZ77
uniprot id: Q56XQ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0496 family.
messages: Membrane

3702:AT3G08610
gene id: 3702:AT3G08610
uniprot id: A0A178VFT6
uniprot id: Q9C9Z5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA1 subunit family.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane

3702:AT1G73870
gene id: 3702:AT1G73870
uniprot id: A0A654EQE7
uniprot id: Q9C9A9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Nucleus

3702:AT2G01735
gene id: 3702:AT2G01735
uniprot id: Q8GUU2
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Embryo-lethal phenotype. Embryo development arrested between globular and torpedo stages.
messages: Membrane
messages: Probable E3 ubiquitin-protein ligase required for embryo development.
messages: Widely expressed.

3702:AT1G21650
gene id: 3702:AT1G21650
uniprot id: D8WUA4
uniprot id: F4HY36
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecA family.
messages: Cannot substitute for SECA1.
messages: Embryo lethal.
messages: Involved in protein export. Probably interacts with other proteins to allow the postimport or conservative sorting pathway for inner membrane proteins in plastids. May have a central role in coupling the hydrolysis of ATP to the transfer of proteins across the membrane.
messages: Part of a second Sec protein translocation apparatus. Interacts probably with SCY2.
messages: chloroplast membrane

3702:AT4G25680
gene id: 3702:AT4G25680
uniprot id: A0A178V7Y9
uniprot id: Q9SZZ6
names: Similarity
messages: Belongs to the DeSI family.

3702:AT5G03040
gene id: 3702:AT5G03040
uniprot id: Q93ZH7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: Nucleus
messages: cytoskeleton

3702:AT1G18710
gene id: 3702:AT1G18710
uniprot id: A0A178W4W9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02720
gene id: 3702:AT1G02720
uniprot id: Q9FWY9
uniprot id: W8Q7E9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.

3702:AT3G50960
gene id: 3702:AT3G50960
uniprot id: Q6NPL9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosducin family.
messages: Cytoplasm
messages: Expressed in embryos, shoot meristems, leaf primordia, root meristems, floral meristems and young floral buds.
messages: Interacts with TUBB2, TUBB3, TUBB4 and TUBB5.
messages: Nucleus
messages: Plant roots over-expressing PLP3A have increased microtubule resistance to propyzamide, an inhibitor of tubulin polymerization. Plants with reduced levels of both PLP3A and PLP3B show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy (PubMed:18390592).
messages: Tubulin-binding protein involved in microtubule formation.

3702:AT3G29190
gene id: 3702:AT3G29190
uniprot id: Q9LS76
names: Cofactor
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: Predominantly expressed in siliques but also in stems.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT1G75390
gene id: 3702:AT1G75390
uniprot id: C0Z2L5
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the micropylar endosperm and radicle tip in early germinating seeds.
messages: Forms heterodimers with BZIP1, BZIP9, BZIP10, BZIP25 and BZIP63.
messages: No visible phenotype under normal growth conditions, but seeds have decreased germination speed after imbibition, without affecting overall germination rate.
messages: Nucleus
messages: Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds.

3702:AT4G33580
gene id: 3702:AT4G33580
uniprot id: A0A654FVP3
uniprot id: Q94CE3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the beta-class carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.
messages: Strongly expressed in aerial tissues including leaves, stems, flowers and siliques.
messages: chloroplast

3702:AT1G15920
gene id: 3702:AT1G15920
uniprot id: A0A5S9UMZ7
uniprot id: Q9S9P2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.

3702:AT3G61190
gene id: 3702:AT3G61190
uniprot id: F4JE67
uniprot id: Q941L2
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Down-regulated by high temperature. Up-regulated by salicylic acid, AgNO(3), chitin, cycloheximide, ozone, syringolin, salt stress and upon pathogen or nematode infection.
messages: Dwarf, twisted leaves and enhanced disease resistance to bacterial and oomycete pathogens in cv. Columbia when grown under constant loght at 22 degrees Celsius. No visible phenotype when grown at 28 degrees Celsius. Accelerated hypersensitive response (HR). Bap1 and bap2 double mutant is seedling lethal.
messages: Expressed in roots, leaves, stems and flowers.
messages: Interacts with BON1 (via VWA domain), BON2 and BON3.
messages: Membrane
messages: Negative regulator of cell death and defense responses. Exhibits calcium-dependent phospholipid binding properties.
messages: Overexpression of BAP1 can suppress a defect in BON1 and confers more susceptibility to virulent pathogens.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G62740
gene id: 3702:AT5G62740
uniprot id: Q9FM19
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: Positive regulator of hypersensitive response (HR)-like cell death. May be involved in potassium ion channel regulation.
messages: Self-interacts and forms heteromers (Ref.8). Interacts with NB-LRR class of R proteins before R proteins (e.g. RPS2 or RPM1) are activated by the effectors (Ref.8). Interacts with LRR1 (PubMed:19712067).

3702:AT4G00660
gene id: 3702:AT4G00660
uniprot id: A0A178UXT2
uniprot id: Q8RXK6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping.
messages: Belongs to the DEAD box helicase family.
messages: Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily.
messages: P-body
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G51390
gene id: 3702:AT1G51390
uniprot id: A0A178W2Q2
uniprot id: Q9C8J2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NifU family.
messages: Mitochondrion
messages: Molecular scaffold for [Fe-S] cluster assembly of mitochondrial iron-sulfur proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G56580
gene id: 3702:AT5G56580
uniprot id: Q9FJV0
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated through serine and threonine phosphorylation.
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase subfamily.
messages: Expressed in roots, stems and flower buds. Higher levels in shoot apices and flowers.
messages: Interacts with P.syringae type III effector HopF2. Interacts with MPK4, MPK6, MPK11 and MPK13. Interacts with ANP3.
messages: Phosphorylation at Ser-221 and Thr-227 by MAP kinase kinase kinases positively regulates kinase activity.
messages: Plants exhibit a dwarf phenotype with fewer flowers, large cells with multiple nuclei in various organs and large malformed pollen grains. Defects in the formation of the cell plate. RNAi MKK6 displays fewer lateral roots.
messages: The ANPs-MKK6-MPK4 module is involved in the regulation of plant cytokinesis during meiosis and mitosis. MKK6-MPK13 module positively regulates lateral root formation. Phosphorylates and activates MPK4. Activates MPK5 and MPK13 in vitro.
messages: phragmoplast

3702:AT5G62165
gene id: 3702:AT5G62165
uniprot id: A0A1P8BA41
uniprot id: A0A1P8BA62
uniprot id: A0A654GD96
uniprot id: Q0WRE2
uniprot id: Q9FIS1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in quiescent center (QC) cells of root tips (PubMed:18162590, PubMed:21689171). Expressed at the base of the petiole of cotyledons and leaves, in flower buds, petals, sepals and abscission zone of flowers and siliques.
messages: Expressed in the shoot apical meristem (SAM) during the vegetative phase and the floral transition. After floral transition, expressed in apical meristem (AM), inflorescence meristem (IM) and floral primordia.
messages: MADS-box transcription factor that acts with AGL71 and AGL72 in the control of flowering time. Promotes flowering at the shoot apical and axillary meristems. Seems to act through a gibberellin-dependent pathway. Interacts genetically with SOC1 and its expression is directly regulated by SOC1 (PubMed:21609362). Plays a role in controlling flower organ senescence and abscission by repressing ethylene responses and regulating the expression of BOP2 and IDA (PubMed:21689171).
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Plants over-expressing AGL42 have a significant delay of leaf and flower senescence and a deficiency in flower abscission.

3702:AT2G25300
gene id: 3702:AT2G25300
uniprot id: A0A1P8B0G1
uniprot id: Q5XEZ1
uniprot id: W8Q717
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 31 family.
messages: Expressed in roots, rosette leaves, cauline leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth.
messages: Reduced levels of arabinogalactan proteins.

3702:AT2G25930
gene id: 3702:AT2G25930
uniprot id: O82804
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Expressed with a circadian rhythm showing a peak 14 to 16 hours after sunrise regardless of day length. Induced in roots after infection by nematodes. Up-regulated by auxin and cytokinin and down-regulated by abscisic acid and temperature stress.
messages: Interacts specifically with both Pr and Pfr forms of phytochrome B. Interacts with ELF4. May form a homodimer.
messages: May be a transcription factor part of a circadian clock input pathway. Acts within a 'zeitnehmer' feedback loop and is involved in its own circadian regulation. Has no role in regulating circadian clock function in the dark. Part of a corepressor complex consisting of ELF4, ELF3, and LUX involved in the transcriptional regulation of APRR9. The activity of the protein may be decreased in long day conditions due to its interaction with phytochrome B (phyB). Can regulate the initiation of flowering independently of phyB. Also involved in responses to nematode parasitism, like the formation of the nematode feeding structure.
messages: Nucleus

3702:AT2G07675
gene id: 3702:AT2G07675
uniprot id: A0A5S9YJ57
uniprot id: P92532
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07675) is not demonstrated. It is also probably not RNA edited and therefore differs in all the positions known to be edited.
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Mitochondrion
messages: Protein S12 is involved in the translation initiation step.

3702:AT2G04305
gene id: 3702:AT2G04305
uniprot id: A0A178VUA2
uniprot id: Q8RY06
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
messages: Membrane

3702:AT2G44530
gene id: 3702:AT2G44530
uniprot id: A0A178VPT7
uniprot id: A8MQM3
uniprot id: O64888
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ribose-phosphate pyrophosphokinase family.
messages: chloroplast

3702:AT1G63080
gene id: 3702:AT1G63080
uniprot id: Q9CAN5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G34300
gene id: 3702:AT1G34300
uniprot id: Q9XID3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G79450
gene id: 3702:AT1G79450
uniprot id: A0A178WMM5
uniprot id: Q8L8W0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CDC50/LEM3 family.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Interacts with ALA2 and ALA3 in a heterologous system.
messages: Prevacuolar compartment membrane
messages: Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

3702:AT5G07650
gene id: 3702:AT5G07650
uniprot id: A0A1P8BH35
uniprot id: A0A654FZB6
uniprot id: P0C5K3
names: Similarity
messages: Belongs to the formin-like family.
messages: Belongs to the formin-like family. Class-II subfamily.

3702:AT5G63180
gene id: 3702:AT5G63180
uniprot id: Q93Z25
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT5G50720
gene id: 3702:AT5G50720
uniprot id: A0A384LCF8
uniprot id: Q0IGM2
uniprot id: Q9FED2
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DP1 family.
messages: By abscisic acid (ABA), cold, drought and salt stresses.
messages: Membrane
messages: Predominantly expressed in stem.

3702:AT3G56910
gene id: 3702:AT3G56910
uniprot id: Q9LER7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the chloroplast-specific ribosomal protein cL37 family.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT4G22300
gene id: 3702:AT4G22300
uniprot id: Q8GYK2
names: Function
names: Similarity
messages: Belongs to the AB hydrolase superfamily. AB hydrolase 2 family.
messages: Carboxylesterase.

3702:AT2G47750
gene id: 3702:AT2G47750
uniprot id: O82243
names: Function
names: Induction
names: Similarity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.
messages: Not induced by auxin.

3702:AT1G33280
gene id: 3702:AT1G33280
uniprot id: Q9C878
names: Developmental Stage
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Detectable in lateral root development when they reach 1 mm long.
messages: Expressed in the root cap, in both columella (COL) and COL-adjoining lateral root cap (LRC) cells. Also present at low levels expression in the tips of cotyledons and the cotyledon vasculature, as weel as in vasculature of the first pair of true leaves and at the hydathodes.
messages: Nucleus
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.
messages: Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

3702:AT4G05530
gene id: 3702:AT4G05530
uniprot id: Q9S9W2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Defective in root hair expansion (PubMed:20562230). Mutant plants are resistant to the inhibitory effect of intermediate levels of indole-3-butyric acid (IBA) and 2,4-DB on root elongation (PubMed:18725356, PubMed:19043666).
messages: Involved with IBR3 and IBR10 in the peroxisomal beta-oxidation of indole-3-butyric acid (IBA) to form indole-3-acetic acid (IAA), a biologically active auxin. May be responsible for catalyzing the dehydrogenation step in the conversion of IBA (PubMed:20562230). May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth (PubMed:19043666).
messages: Peroxisome

3702:AT5G44840
gene id: 3702:AT5G44840
uniprot id: F4KBP8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G09360
gene id: 3702:AT5G09360
uniprot id: Q9FY79
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Expressed at low levels in flowers and siliques.
messages: Lignin degradation and detoxification of lignin-derived products.
messages: apoplast

3702:AT1G12280
gene id: 3702:AT1G12280
uniprot id: P60838
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the disease resistance NB-LRR family.
messages: Disease resistance protein that mediates defense responses against the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000, and the virulent oomycete Hyaloperonospora arabidopsidis isolate Noco2. Becomes active when the MEKK1-MKK1-MKK2-MPK4 kinase cascade is disrupted by the microbial effector hopAI1. Does not seem to be required for the activation of MPK4 by flg22, or flg22-induced up-regulation of PAD3 (PubMed:22423965). Functions downstream of MEKK2/SUMM1 in immune responses, including cell death and defense responses (PubMed:22643122).
messages: Interacts with PAT1.
messages: Negatively regulated by the MEKK1-MKK1-MKK2-MPK4 kinase cascade.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT4G14713
gene id: 3702:AT4G14713
uniprot id: A0A190V511
uniprot id: A0A1P8B4T7
uniprot id: A0A1P8B4V3
uniprot id: F4JIE4
uniprot id: Q7XA73
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TIFY/JAZ family.
messages: First detected at the tip of developing leaf, followed by a tip-to-base progression of the expression.
messages: Interacts with AFPH2/NINJA.
messages: Nucleus
messages: Plants lacking both TIFY4A and TIFY4B have larger leaves and cotyledon laminae, a dome-shaped leaf curvature and shortened siliques.
messages: Redundant with TIFY 4B/PPD2.
messages: Regulates the arrest of dispersed meristematic cells during lamina development.
messages: Repressor of jasmonate responses.
messages: The jas domain is required for interaction with COI1.

3702:AT1G21750
gene id: 3702:AT1G21750
uniprot id: A0A178WAM1
uniprot id: F4HZN9
uniprot id: Q9XI01
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein disulfide isomerase family.
messages: By chemically-induced ER stress response.
messages: During embryo development, expressed exclusively in endothelial cells from the pre-embryo up to the heart stage. Expression disappears when the endothelial cells undergo PCD in the early-bent cotyledon stage (at protein level).
messages: Endoplasmic reticulum lumen
messages: Highly expressed in flowers, stems and immature seeds, and at lower levels in leaves and siliques (at protein level).
messages: Interacts with RD21A, At3g19390, At5g43060.
messages: Protein disulfide isomerase that associates with RD21A protease for trafficking from the ER through the Golgi to lytic and protein storage vacuoles of endothelial cells in developing seeds. Regulates the timing of programmed cell death (PCD) of the endothelial cells by chaperoning and inhibiting cysteine proteases during their trafficking to vacuoles.
messages: Reduced seed set.
messages: Vacuole

3702:AT1G62310
gene id: 3702:AT1G62310
uniprot id: C0SV12
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in inflorescences, roots, siliques, leaves and stems.
messages: May function as histone H3 lysine demethylase and be involved in regulation of gene expression.
messages: Nucleus

3702:AT1G07250
gene id: 3702:AT1G07250
uniprot id: A0A384KNH2
uniprot id: Q9LML6
uniprot id: W8QPB7
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives.

3702:AT5G08080
gene id: 3702:AT5G08080
uniprot id: A0A178U9Y3
uniprot id: F4K9K2
uniprot id: Q8VZU2
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the syntaxin family.
messages: Cell membrane
messages: Defect in cytokinesis in embryos and defect in seedling growth.
messages: Induced by auxin in roots (PubMed:30926657). Down-regulated by auxin in shoots (PubMed:30926657).
messages: Part of the t-SNARE complex.
messages: Plants silencing SYP132 exhibit reduced root hair length.
messages: Vesicle trafficking protein that functions in the secretory pathway (Probable). Acts in coordination with SYP123 to mediate tip-focused membrane trafficking for root hair tip growth (PubMed:24642714). Functions in root hair elongation by forming SNARE complexes with VAMP721,VAMP722 or VAMP724 (PubMed:24642714). Involved in cytokinesis (PubMed:29396117). Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division (PubMed:29396117). Required for secretory trafficking to the plasma membrane during interphase (PubMed:29396117). Involved in the regulation of density of the H(+) ATPase proteins at the plasma membrane of root and shoot in epidermal cells (PubMed:30926657). Modulation of SYP132 expression by auxin affects clathrin-sensitive H(+) ATPase traffic from the plasma membrane, and influences apoplastic acidification and plant growth (PubMed:30926657).
messages: Widely expressed in all tissues throughout plant development.

3702:AT3G55030
gene id: 3702:AT3G55030
uniprot id: A0A178VAK6
uniprot id: Q9M2W3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane
messages: Microsome membrane
messages: This protein catalyzes the committed step to the synthesis of the acidic phospholipids.

3702:AT3G19120
gene id: 3702:AT3G19120
uniprot id: Q9LJL8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HARBI1 family.
messages: Nucleus

3702:AT3G07340
gene id: 3702:AT3G07340
uniprot id: A0A1I9LTV0
uniprot id: A0A654F6M8
uniprot id: Q9SRT2
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed constitutively in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT5G55330
gene id: 3702:AT5G55330
uniprot id: A0A5S9YEX0
uniprot id: Q9FJ77
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the wax synthase family.
messages: Catalyzes the final step in the synthesis of long-chain linear esters (waxes).
messages: Membrane

3702:AT1G47210
gene id: 3702:AT1G47210
uniprot id: A0A178WIN4
uniprot id: Q9C6A9
names: Developmental Stage
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Expressed in the G1/S phases.

3702:AT5G37450
gene id: 3702:AT5G37450
uniprot id: A0A1R7T3G3
uniprot id: C0LGU1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G32070
gene id: 3702:AT1G32070
uniprot id: A0A178W7D4
uniprot id: Q7X9V3
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acetyltransferase that acetylates in vitro histones H2A and H3. Does not act as a transcriptional activator but might be involved in the sink-source transition. In case of begomoviruses infection, acetylates the capsid protein (CP), but not the nuclear shuttle protein (NSP). Required for begomovirus infection and systemic spread.
messages: Autoacetylated.
messages: Belongs to the acetyltransferase family.
messages: Expressed in the apical meristem, root vasculature and all veins in the cotyledons of young developing seedlings. Loss of expression in the older maturing tissues.
messages: Highly expressed in cauline leaves, at lower levels in stems, siliques, inflorescences and rosettes leaves and at very low levels in roots. Expressed in the xylem parenchyma and phloem of the leaves and root, and in guard cells of young leaves.
messages: Inhibited by the viral nuclear shuttle protein (NSP) that binds to the region required for oligomerization.
messages: Lacks the bromodomain involved in binding of other acetyltransferases to histones.
messages: Nucleus
messages: Oligomer. Interacts with begomoviruses NSP but not with CP. This interaction may allow NSP to recruit NSI monomers to acetylate viral genome-bound CP and thus regulate nuclear export of viral genome by NSP.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:ArthCp065
gene id: 3702:ArthCp065
uniprot id: A0A1B1W4Y6
uniprot id: P61845
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: Binds to 23S rRNA.
messages: Part of the 50S ribosomal subunit.
messages: chloroplast

3702:AT1G47200
gene id: 3702:AT1G47200
uniprot id: Q9C500
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds to FPP proteins (By similarity). Interacts with WAP, WIP1, WIP2 and WIP3 through its WPP domain. Interacts with WIT1 and HSP70-1.
messages: Cytoplasm
messages: Expressed in roots, stems, leaves and flowers.
messages: Golgi apparatus
messages: Nucleus
messages: Nucleus envelope
messages: Regulates the mitotic activity in roots. Plays a role with HSP70-1 in facilitating WIT1 nuclear envelope targeting.
messages: The WPP domain is required for the nuclear envelope localization.

3702:AT2G30340
gene id: 3702:AT2G30340
uniprot id: A0A178VRU4
uniprot id: A0A178VTE1
uniprot id: A0A384LQ09
uniprot id: Q9AT61
names: Caution
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in shoots and roots and at low levels in flowers, but not in leaves or inflorescence stems.
messages: It is uncertain whether Met-1 or Met-33 is the initiator.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G17700
gene id: 3702:AT5G17700
uniprot id: A0A178UJQ3
uniprot id: A0A1P8BAR9
uniprot id: Q8L616
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT2G17630
gene id: 3702:AT2G17630
uniprot id: Q9SHP0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
messages: Involved in the plastidial phosphorylated pathway of serine biosynthesis (PPSB). Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine.
messages: chloroplast

3702:AT1G67810
gene id: 3702:AT1G67810
uniprot id: Q9FXE3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SufE family.
messages: Highly expressed in flowers and pollen, and at low levels in roots, leaves and stems.
messages: Participates in cysteine desulfurization mediated by NFS2. Can activate the cysteine desulfurase activity of NFS2 in vitro. Cysteine desulfurization mobilizes sulfur from L-cysteine to yield L-alanine and supplies the inorganic sulfur for iron-sulfur (Fe-S) cluster formation.
messages: chloroplast

3702:AT5G46390
gene id: 3702:AT5G46390
uniprot id: F4KHG6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S41A family.
messages: Protease involved in the C-terminal processing of the chloroplastic D1 protein of photosystem II. This proteolytic processing is necessary to allow the light-driven assembly of the tetranuclear manganese cluster, which is responsible for photosynthetic water oxidation.
messages: chloroplast thylakoid lumen

3702:AT1G68620
gene id: 3702:AT1G68620
uniprot id: Q9SX25
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in roots, leaves, flowers and siliques.

3702:AT3G08990
gene id: 3702:AT3G08990
uniprot id: A0A178VDW8
uniprot id: Q9SR97
names: Similarity
messages: Belongs to the yippee family.

3702:AT1G73430
gene id: 3702:AT1G73430
uniprot id: A0A654EQ44
uniprot id: F4HQ84
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking (PubMed:27448097). Involved in pollen tube growth by modulating Golgi morphology and vesicle trafficking homeostasis leading to the deposition of cell wall components and proteins at the pollen tube tip (PubMed:27448097). Required for sporophytic development (PubMed:27448097).
messages: Belongs to the COG3 family.
messages: Golgi apparatus membrane
messages: Homodimer (PubMed:27448097). Component of the conserved oligomeric Golgi complex which is composed of eight different subunits and is required for normal Golgi morphology and localization (Probable). Interacts with COG1, COG2, COG4, COG5 and COG8 (PubMed:27448097).
messages: Male-specific transmission defect due to incorrect deposition of cell wall components and proteins during pollen tube elongation, thus leading to disrupted pollen tube growth (PubMed:27448097). Embryo- and seedling-lethal associated with white seeds in siliques, delayed embryo development from the early stages, arrested at heart stages and resulting in abnormal curled cotyledons (PubMed:27448097). Altered Golgi bodies morphology (PubMed:27448097). Impaired Gamma-COP and TMN1/EMP12 tight association with the Golgi (PubMed:27448097).

3702:AT2G23830
gene id: 3702:AT2G23830
uniprot id: A0A178VNP8
uniprot id: O82213
names: Function
names: Similarity
messages: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17) family.
messages: May play a role in vesicle trafficking.

3702:AT5G41060
gene id: 3702:AT5G41060
uniprot id: A0A178UBG9
uniprot id: A0A1P8BD91
uniprot id: A0A7G2FJL0
uniprot id: A8MRY3
uniprot id: Q9FLM3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cell membrane
messages: Membrane
messages: Palmitoyl acyltransferase.
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT1G29400
gene id: 3702:AT1G29400
uniprot id: Q8VWF5
names: Developmental Stage
names: Disruption Phenotype
names: Function
messages: Early flowering.
messages: Expressed throughout the meristem during embryonic and vegetative development. Expressed in floral organogenic regions.
messages: Probable RNA-binding protein that plays a role in meiosis and vegetative growth.

3702:AT2G38910
gene id: 3702:AT2G38910
uniprot id: Q9ZV15
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (398-428) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT3G50990
gene id: 3702:AT3G50990
uniprot id: Q9SD46
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: There are 73 peroxidase genes in A.thaliana.

3702:AT4G21130
gene id: 3702:AT4G21130
uniprot id: Q3MKM6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat RRP9 family.
messages: Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA (By similarity). Essential for embryogenesis (By similarity). May function during late embryogenesis (PubMed:20699009).
messages: Embryonic lethality.
messages: nucleolus

3702:AT2G22720
gene id: 3702:AT2G22720
uniprot id: A0A1P8AXS7
uniprot id: F4IKF3
uniprot id: Q0WW54
uniprot id: Q9ZQ42
names: Similarity
messages: Belongs to the SPT2 family.

3702:AT3G11880
gene id: 3702:AT3G11880
uniprot id: A0A1I9LT89
uniprot id: A0A1I9LT91
uniprot id: A0A5S9XCM3
uniprot id: Q944J9
uniprot id: Q9SF11
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TMEM214 family.
messages: Constitutively interacts with CASP4; required for the localization of procaspase 4 to the ER.
messages: Critical mediator, in cooperation with CASP4, of endoplasmic reticulum-stress induced apoptosis. Required or the activation of CASP4 following endoplasmic reticulum stress.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT3G07430
gene id: 3702:AT3G07430
uniprot id: Q9SRS3
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YggT family.
messages: Plant over-expressing YLMG1-1 have impaired chloroplast division leading to reduced number and enlarged chloroplasts in mesophyll cells. Plants silencing YLMG1-1 show a pale green phenotype in young emerging leaves and the basal part of expanding leaves.
messages: Required for the proper distribution of nucleoids in chloroplasts. The nucleoid partitioning by YLMG1-1 may be related to chloroplast division processes.
messages: chloroplast thylakoid membrane

3702:AT3G52740
gene id: 3702:AT3G52740
uniprot id: Q9LXJ1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Interacts with CRY2 in both darkness and light.
messages: No visible phenotype. Bic1 and bic2 double mutants have a blue light-hypersensitive short-hypocotyl phenotype and an increased anthocyanin accumulation when grown in continuous blue light.
messages: Nucleus
messages: Regulates the blue-light dependent dimerization of CRY2 and formation of photobodies. Interacts with photoexited CRY2 to inhibit its activity. Inhibits CRY phosphorylation.

3702:AT5G48720
gene id: 3702:AT5G48720
uniprot id: Q6NLW5
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: By X-rays and bleomycin treatment.
messages: Complete sterility.
messages: Interacts (via C-terminal domain) with MIP1.
messages: Nucleus
messages: Required for mitotic division of the generative cell nucleus and the development of mature tricellular pollen grains, and for male and female meiosis.
messages: The induction by X-rays is dependent on DNA damage signaling by ATM.

3702:AT5G35630
gene id: 3702:AT5G35630
uniprot id: A0A384L697
uniprot id: B9DGD1
uniprot id: Q43127
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glutamine synthetase family.
messages: By light, sucrose, glucose and fructose.
messages: Expressed in mesophyll and epidermal cells of leaves.
messages: Homooctamer.
messages: Mitochondrion
messages: The light-modulated chloroplast/mitochondrial enzyme, encoded by a nuclear gene and expressed primarily in leaves, is responsible for the reassimilation of the ammonia generated by photorespiration.
messages: chloroplast

3702:AT5G58180
gene id: 3702:AT5G58180
uniprot id: A0A5S9YF49
uniprot id: Q9LVM9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the synaptobrevin family.
messages: Cell membrane
messages: Interacts with SYP41 (PubMed:15919093). Core constituent of the SNARE complex required for membrane fusion at the trans-Golgi network (PubMed:15919093).
messages: Involved in the secretory pathway (PubMed:15919093). Essential for membrane fusion mediated by either SYP41 or SYP61; triggers the fusion of phospholipid vesicles containing SYP41 or SYP61 and VTI12 (PubMed:15919093, PubMed:24021022).
messages: Membrane

3702:AT3G06080
gene id: 3702:AT3G06080
uniprot id: A0A178VE05
uniprot id: A0A654F9V2
uniprot id: Q9LDG2
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G15730
gene id: 3702:AT3G15730
uniprot id: A0A178VKX2
uniprot id: Q38882
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phospholipase D family. C2-PLD subfamily.
messages: C2 domain is a calcium-binding fold, and the binding induces conformational changes, promoting the protein association with membranes. These conformational changes occure at millimolar Ca(2+) concentrations. Binds also PIP2. A lower affinity toward calcium can be anticipated for PLD alpha due to the absence of two potential calcium ligands.
messages: Ca(2+) requirement for activity depends on pH. Active either under acidic conditions with micromolar levels of calcium (PIP2-dependent) or at neutral pH with millimolar levels of calcium (PIP2-independent).
messages: Cell membrane
messages: Cytoplasm
messages: Highly expressed in roots, stems and flowers, moderately in leaves, seedlings and siliques. Not detected in seeds.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Plays an important role in various cellular processes, including phytohormone action and response to stress, characterized by acidification of the cell (PubMed:9437863). Involved in wound induction of jasmonic acid (PubMed:11090221). May be involved in membrane lipid remodeling (PubMed:11239826). Probably involved in freezing tolerance by modulating the cold-responsive genes and accumulation of osmolytes (PubMed:16949955). Can use phosphatidylcholine (PC), phosphatidylethanolamine (PE) and phosphatidylglycerol (PG) as substrates, both in presence or in absence of PIP2 (PubMed:9578608). Its main substrate is phosphatidylcholine (PubMed:11239826). Stimulates the intrinsic GTPase activity of GPA1 upon binding (PubMed:14594812). Mediates the abscisic acid effects on stomata through interaction with GPA1 and the production of phosphatidic acid that bind to ABI1 (PubMed:17261695, PubMed:17565616). Involved in seed aging and deterioration (PubMed:17565616). Involved in microtubule stabilization and salt tolerance (PubMed:23150630). Involved in abscisic acid-induced stomatal closure (PubMed:22392280).
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
messages: Interacts with GPA1 (PubMed:14594812, PubMed:16614222, PubMed:23913032). This binding inhibits PLDALPHA1 activity and is relieved by GTP (PubMed:14594812).
messages: Microsome membrane
messages: Mitochondrion membrane
messages: No visible phenotype under normal growth conditions, but improved resistance of the seeds to deterioration during storage (PubMed:17565616). Insensitivity to abscisic acid for both promotion of stomatal closure and inhibition of stomatal opening (PubMed:16614222). Hypersensitivity to hyperosmotic stress (PubMed:19017627). Increased NaCl-induced disorganization of microtubules (PubMed:23150630). No effect on abscisic acid-induced stomatal closure (PubMed:22392280). Pldalpha1 and plddelta double mutants have a suppressed abscisic acid-induced stomatal closure (PubMed:22392280).
messages: Not inhibited by neomycin.
messages: Up-regulated by abscisic acid and ethylene (PubMed:9437863). Up-regulated by salt, dehydration and osmotic stresses (PubMed:19017627). Not regulated by abscisic acid (PubMed:22392280).
messages: Vacuole
messages: clathrin-coated vesicle

3702:AT1G71160
gene id: 3702:AT1G71160
uniprot id: A0A178W4M1
uniprot id: Q9C992
names: Caution
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Expressed in flowers.
messages: Membrane
messages: Repressed by herbicides such as flufenacet and benfuresate.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G64780
gene id: 3702:AT1G64780
uniprot id: A0A5S9WPC1
uniprot id: Q9ZPJ8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Ammonium transporter probably involved in ammonium uptake from the soil.
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: High expression in root.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT4G24040
gene id: 3702:AT4G24040
uniprot id: Q9SU50
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 37 family.
messages: Cell membrane
messages: Highly expressed in flowers. Expressed at low levels in leaves and stems.
messages: Involved in the regulation of trehalose content by hydrolyzing trehalose to glucose.
messages: No visible phenotype under normal growth conditions, but plants accumulate high levels of trehalose and starch.

3702:AT1G44980
gene id: 3702:AT1G44980
uniprot id: Q9MAL0
names: Function
names: Similarity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.

3702:AT4G26483
gene id: 3702:AT4G26483
uniprot id: F4JUZ6
names: Function
names: Similarity
messages: Belongs to the nicotianamine synthase (NAS)-like family.
messages: Synthesizes nicotianamine, a polyamine which serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.

3702:AT4G32990
gene id: 3702:AT4G32990
uniprot id: F4JVW1
names: Function
names: Similarity
messages: Belongs to the WD repeat CIA1 family.
messages: Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

3702:AT3G22231
gene id: 3702:AT3G22231
uniprot id: A0A654FEZ4
uniprot id: Q94C26
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: Cell membrane
messages: Expressed at very low levels in seedlings and petioles, and at higher levels in leaves. Also present in phloem sap.
messages: Late flowering and defective in UV-C light acceleration of flowering. Strong reduction of FLOWERING LOCUS T (FT) expression. Hypersensitivity to abscisic acid (ABA) and alterations in polar lipid contents and their corresponding fatty acids; reduced levels of phosphatidylinositol (PI) and of 18:0, but increased levels of 18:2 and 18:3 polar lipids. Increased susceptibility to the hemi-biotrophic oomycete pathogen Phytophthora brassicae but enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea.
messages: Low expression after germination followed by an abrupt level increase in 10-days old seedlings. Accumulates in senescent leaves.
messages: Membrane
messages: Modulates resistance against pathogens including oomycetes (e.g. Hyaloperonospora parasitica and Phytophthora brassicae) and fungi (e.g. Phytophthora brassicae). Controls the abscisic acid-mediated (ABA) signaling pathways. Regulator of the flowering time in response to stress (e.g. UV-C). Regulates polar lipid content; promotes phosphatidylinositol (PI) and 18:0 but prevents 18:2 and 18:3 polar lipids accumulation.
messages: Rapidly up-regulated after pathogen exposure (e.g. avirulent and virulent Pseudomonas syringae pv. tomato) in a salicylic acid (SA) defense-signaling pathway-dependent manner. Circadian-regulation with accumulation during the light period, peaks of expression at the end of the day, and low levels during the dark period. Up-regulated by UV-C light through a SA-dependent process and in a CONSTANS- (CO) dependent manner.

3702:AT1G13890
gene id: 3702:AT1G13890
uniprot id: Q9LMG8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SNAP-25 family.
messages: Cytoplasm
messages: Membrane
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT3G12600
gene id: 3702:AT3G12600
uniprot id: Q9LHK1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: Mitochondrion
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.

3702:AT2G28250
gene id: 3702:AT2G28250
uniprot id: Q8VYY5
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Endosome
messages: Interacts with ARAC5.
messages: Mostly expressed in leaf primordia, root and shoot apical meristems, lateral root primordia, and stele of older roots and hypocotyls. In leaves and cotyledons, highest levels observed in trichomes, vasculatures, and hydathode endothem.
messages: Phosphorylated.
messages: Prevacuolar compartment membrane

3702:AT4G16950
gene id: 3702:AT4G16950
uniprot id: F4JNB7
names: Domain
names: Function
names: Subunit
messages: Interacts with RSH1.
messages: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis isolate Noco2 (downy mildew disease) (PubMed:9212464). Confers resistance to H.arabidopsis isolates Emoy2, Emwa1 and Noco2 (PubMed:11846877).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT3G12080
gene id: 3702:AT3G12080
uniprot id: A0A384LJ95
uniprot id: B5X565
uniprot id: F4J8M2
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.

3702:AT1G17890
gene id: 3702:AT1G17890
uniprot id: B9DH36
uniprot id: Q9LMU0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Fucose synthase subfamily.
messages: Catalyzes the two-step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
messages: Homodimer.

3702:AT4G23140
gene id: 3702:AT4G23140
uniprot id: Q9C5S9
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: By salicylic acid (SA) or by a bacterial pathogen infection. May be regulated by WRKY DNA-binding proteins at the transcriptional level.
messages: May be due to a competing acceptor splice site.
messages: Membrane

3702:AT4G18440
gene id: 3702:AT4G18440
uniprot id: A0A654FQL5
uniprot id: Q8RY94
names: Similarity
messages: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.

3702:AT4G29730
gene id: 3702:AT4G29730
uniprot id: A0A1P8B6T2
uniprot id: A0A654FUH5
uniprot id: Q9SU78
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
messages: Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA (By similarity). Acts together with PDP1 and MSI4/FVE to regulate the function of the PRC2 complex on FLC (PubMed:29314758).
messages: Interacts with AHL16 (PubMed:23394836). Interacts with LHP1, PDP2, PDP3 and PDP6 (PubMed:29314758). Component of the PRC2 (polycomb repressive complex 2) complex which regulates histone methylation on histone H3K27 (PubMed:29314758).
messages: Nucleus
messages: Reduced H3K27me3 level but increased levels of histone H3 acetylation and H3K4me3 on FLC in the fve msi5 double mutant.
messages: The DWD box is required for interaction with DDB1A.

3702:AT4G11730
gene id: 3702:AT4G11730
uniprot id: Q9T0E0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Membrane
messages: This protein is not an active H(+)-ATPase in its current form as there is a deletion in a conserved domain crucial for P-type ATPase function.

3702:AT1G56410
gene id: 3702:AT1G56410
uniprot id: A0A5S9WMW9
uniprot id: Q9C7X7
names: Similarity
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.

3702:AT5G46630
gene id: 3702:AT5G46630
uniprot id: A0A178UQZ5
uniprot id: F4KHJ7
uniprot id: O23140
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Adaptor protein complex 2 (AP-2) is a heterotetramer composed of two large adaptins (alpha-type and beta-type subunits), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes medium subunit family.
messages: Cell membrane
messages: Membrane
messages: Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. AP-2 recognizes Y-X-X-Phi endocytosis signal motif within the cytosolic tails of transmembrane cargo molecules. The complex binds polyphosphoinositides.
messages: coated pit
messages: trans-Golgi network membrane

3702:AT5G45300
gene id: 3702:AT5G45300
uniprot id: A0A178UCG1
uniprot id: A0A1P8BBC1
uniprot id: A0A654G8G9
uniprot id: Q9FH80
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 14 family.
messages: Cytoplasm
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G62540
gene id: 3702:AT3G62540
uniprot id: Q3EAF8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G07860
gene id: 3702:AT3G07860
uniprot id: Q84WS8
names: Subcellular Location Annotation
names: Subunit
messages: Component of the U11/U12 snRNPs that are part of the U12-type spliceosome.
messages: Nucleus

3702:AT3G60300
gene id: 3702:AT3G60300
uniprot id: A0A384KJH0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G60120
gene id: 3702:AT5G60120
uniprot id: A0A178USN8
uniprot id: A0A1P8BEK0
uniprot id: A0A1P8BEK5
uniprot id: A0A654GDR3
uniprot id: F4JXG9
uniprot id: Q9LVG2
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay.
messages: Repressed by miR172a-2/EAT.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G02300
gene id: 3702:AT4G02300
uniprot id: O81415
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in siliques but not in flower buds.
messages: Expression restricted to early to mid-stage of silique development.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT4G29380
gene id: 3702:AT4G29380
uniprot id: Q9M0E5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cytoplasm
messages: Endosome membrane
messages: In anthers, barely detected in microsporocytes at stage 6, but accumulates strongly in tetrads at stage 7, microspores, mature pollen grains, and tapetum cells. Also detectable in the growing pollen tubes on the stigma.
messages: Interacts with VPS34 (PubMed:22361507). Component of a complex made of VPS38/USL1 and PI3K main subunits such as VPS15, ATG6/VPS30 and VPS34 (PubMed:29897620).
messages: Mainly expressed in anthers, pollen grains and pollen tubes, and, to a lower extent, in other tissues and organs including seedlings, roots, stems, leaves, flowers, pitils and siliques.
messages: Reduced male gametophyte transmission. Abnormal pollen grains with unusual large vacuoles. Reduced pollen germination rescued by phosphatidylinositol 3-phosphate (PI3P) treatment.
messages: Serine/threonine-protein kinase required for cytoplasm to vacuole transport (Cvt) and autophagy as a part of the autophagy-specific VPS34 PI3-kinase complex I (By similarity). Required for pollen development and germination, probably via the modulation of phosphatidylinositol 3-phosphate (PI3P) formation and vacuolar organization (PubMed:21833541, PubMed:22361507).
messages: trans-Golgi network membrane

3702:AT1G52930
gene id: 3702:AT1G52930
uniprot id: A0A5S9WP56
uniprot id: Q9C928
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the BRX1 family.
messages: Delayed growth rate.
messages: Expressed in roots, rosette leaves, stems, flowers, siliques and seeds.
messages: Involved in pre-rRNA processing and required for biogenesis of the large (60S) ribosomal subunit. Required for proper development.
messages: nucleolus

3702:AT2G43410
gene id: 3702:AT2G43410
uniprot id: Q8LPQ9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the RRM Spen family.
messages: Expressed in roots, leaves, stems and flowers. Highest expression in flower stems and meristematic regions.
messages: Expressed throughout the plant life cycle.
messages: Late flowering.
messages: Negative feedback mediated by FPA itself.
messages: Nucleus
messages: Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for RNA-mediated chromatin silencing of a range of loci in the genome. Cotranscriptionally recognizes aberrant RNA and marks it for silencing. Controls alternative cleavage and polyadenylation on pre-mRNAs and antisense RNAs. Acts redundantly with FCA to prevent the expression of distally polyadenylated antisense RNAs at the FLC locus.
messages: While FCA requires both FY and FLD, FPA requires FLD but not FY to repress FLC.

3702:AT1G01120
gene id: 3702:AT1G01120
uniprot id: A0A178W124
uniprot id: Q9MAM3
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Contributes to cuticular wax and suberin biosynthesis. Involved in both decarbonylation and acyl-reduction wax synthesis pathways. Elongase condensing enzyme mostly active with saturated fatty acids, especially with 16:0, 16:1, 18:0, and 20:0. Mediates the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C22, C24 and C26).
messages: Endoplasmic reticulum membrane
messages: Inhibited by K3 herbicides such as alachlor, allidochlor, anilofos, cafenstrole, fentrazamide and flufenacet (PubMed:15277688). Strongly inhibited by metazachlor and mefluidide (PubMed:22284369).
messages: It is uncertain whether Met-1 or Met-9 is the initiator.
messages: Plants have thinner stems with an altered wax composition, and are more sensitive to dehydration.
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Down-regulated by darkness and low temperature, and up-regulated by salt, drought and osmotic stress (PubMed:18465198).
messages: Ubiquitous (PubMed:10074711). Expressed in siliques, flowers, leaves and stems. Barely detected in roots (PubMed:18465198).

3702:AT2G36970
gene id: 3702:AT2G36970
uniprot id: Q9SJL0
uniprot id: W8Q6X6
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G76190
gene id: 3702:AT1G76190
uniprot id: A0A654EPF0
uniprot id: Q9SGR4
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT2G15535
gene id: 3702:AT2G15535
uniprot id: Q8S8H9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G02290
gene id: 3702:AT1G02290
uniprot id: A0A178WCE2
uniprot id: Q6GKW8
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G01260
gene id: 3702:AT4G01260
uniprot id: O04608
names: Similarity
messages: Belongs to the GeBP family.

3702:AT5G01190
gene id: 3702:AT5G01190
uniprot id: A0A1R7T3A1
uniprot id: Q6ID18
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Lignin degradation and detoxification of lignin-derived products.
messages: Ubiquitous, with lower levels in siliques.
messages: apoplast

3702:AT2G46760
gene id: 3702:AT2G46760
uniprot id: A0A5S9X8D2
uniprot id: O81032
names: Function
names: Similarity
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: May be involved in the biosynthesis of ascorbic acid.

3702:AT3G54980
gene id: 3702:AT3G54980
uniprot id: Q9SV46
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G10920
gene id: 3702:AT1G10920
uniprot id: O04093
names: Caution
names: Induction
names: Similarity
messages: Belongs to the disease resistance NB-LRR family. RPP8/HRT subfamily.
messages: Could be the product of a pseudogene. In strain cv. Columbia, a stop codon at position 117 and a naturally occurring frameshift at position 846 result in a truncated LOV1 protein. A complete sequence for LOV1 can be found in strain cv. Cl-0 (AC A7XGN8).
messages: Repressed by silencing mediated by polycomb group (PcG) protein complex containing EMF1 and EMF2.

3702:AT1G05770
gene id: 3702:AT1G05770
uniprot id: Q9MA49
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT1G61000
gene id: 3702:AT1G61000
uniprot id: A0A178W7M2
uniprot id: Q8RXJ0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity to ensure proper cell division.
messages: Belongs to the NUF2 family.
messages: Component of the NDC80 complex, which consists of NDC80, NUF2, SPC24 and SPC25.
messages: Embryonic lethality due to division arrest before the globular stage.
messages: centromere

3702:AT2G48020
gene id: 3702:AT2G48020
uniprot id: A0A1P8AZ00
uniprot id: A0A1P8AZ27
uniprot id: A0A5S9X7Z2
uniprot id: P93051
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT2G46990
gene id: 3702:AT2G46990
uniprot id: A0A178W181
uniprot id: E1A7R2
uniprot id: O24410
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
messages: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the Aux/IAA family.
messages: By auxin.
messages: Homodimers and heterodimers.
messages: Nucleus
messages: The N-terminal half of the protein contains two conserved domains I and II. Domain I includes a slightly degenerated ERF-associated amphiphilic repression (EAR) motif which seems to be involved in the activity of transcriptional repression. Domain II is required for the correct degradation of the protein through the SCF-mediated ubiquitin-proteasome pathway. Interactions between Aux/IAA proteins and auxin response factors (ARFs) occur through their C-terminal dimerization domains III and IV.

3702:AT5G64600
gene id: 3702:AT5G64600
uniprot id: A0A654GE32
uniprot id: F4KF16
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT2G41010
gene id: 3702:AT2G41010
uniprot id: O80683
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By cold, salt stress and dehydration.
messages: Calmodulin-binding protein that functions as a negative regulator of osmotic stress tolerance.
messages: Expressed in leaves, flowers and siliques.
messages: Interacts with calmodulin (CaM) (PubMed:15086802). Interacts with WRKY25 and WRKY51 (PubMed:22535423).
messages: Nucleus

3702:AT1G05750
gene id: 3702:AT1G05750
uniprot id: Q9MA50
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: chloroplast

3702:AT5G54570
gene id: 3702:AT5G54570
uniprot id: A0A1P8BA32
uniprot id: A0A1P8BA38
uniprot id: Q9FIU7
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT1G75820
gene id: 3702:AT1G75820
uniprot id: A0A384L048
uniprot id: C0LGJ2
uniprot id: Q9SYQ8
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Ectopic fruit organ initiation after floral meristem termination (PubMed:21705761). Enhanced disease resistance response to the bacterial pathogen Ralstonia solanacearum and to the biotrophic oomycete pathogen Hyaloperonospora arabidopsidis (PubMed:26990325).
messages: In a central region of the shoot and in early flower meristems.
messages: Involved in the detection of CLV3 and CLV3-like (CLE) peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3p as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation.
messages: Self-interacts. Interacts with CRN; this interaction is direct. Interacts with CLV3 and CLE2 mature peptides (MCLV3 and CLE2p, respectively) via its extracellular leucine-rich repeat region.
messages: Sequencing errors.

3702:AT3G15970
gene id: 3702:AT3G15970
uniprot id: Q9LW88
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins.
messages: Probably involved in nucleocytoplasmic transport via its interactions with importins and Ran, rather than by forming part of the nuclear pore complex (NPC) scaffolding.
messages: nuclear pore complex
messages: nucleoplasm

3702:AT1G79910
gene id: 3702:AT1G79910
uniprot id: A0A1P8APC4
uniprot id: A0A654ES52
uniprot id: F4HQD2
uniprot id: Q8L402
names: Similarity
messages: Belongs to the IST1 family.

3702:AT3G15820
gene id: 3702:AT3G15820
uniprot id: Q9LVZ7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphatidylcholine:diacylglycerol cholinephosphotransferase family.
messages: Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase that catalyzes the transfer of the phosphocholine headgroup from phosphatidylcholine (PC) to diacylglycerol, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway.
messages: Membrane
messages: Reduction of 18:2 and 18:3 triacylglycerols (TAG) accumulation in seeds by 40 percent.

3702:AT2G41860
gene id: 3702:AT2G41860
uniprot id: P93759
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (318-348) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT4G29860
gene id: 3702:AT4G29860
uniprot id: Q3MV14
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 'Tanmei' means short life in Japanese.
messages: Accumulates throughout the embryo and in endosperm (PubMed:16113228). Expressed throughout the plant life cycle, from embryogenesis to seed set. Accumulates in the shoot apex. In roots, confined to the vascular system. In anthers, observed when the filaments start to elongate, and remain expressed in later stages. Constitutively expressed in gynoecia (PubMed:22411811).
messages: Belongs to the plant DSE1 protein family.
messages: Cytoplasm
messages: Defects in both embryo and seedling development, and pale yellow seeds. Die as embryos, probably because of intolerance to desiccation and abnormal protein and lipid body accumulation in mature seeds, but immature mutant seeds can be germinated in culture and lead to short life seedlings defective in shoot and root development, with reduced hypocotyls elongation in the dark (PubMed:16113228, PubMed:15266054). Seedlings accumulate less anthocyanin, are intolerant to desiccation, form trichomes on cotyledons, and have reduced accumulation of storage proteins and lipids (PubMed:16113228). Suppressor of the aluminum- (Al) hypersensitive mutant als3-1 that fails to halt root growth after Al exposure, does not accumulate CyclinB1;1 in the root tip, and fails to force differentiation of the quiescent center and is thus highly tolerant to high Al levels (PubMed:22345493). In dse1, reduced plasmodesmata (PD) formation and cell-to-cell transport during embryogenesis, due to reduced PD size exclusion limit. Dse1 embryos are developmentally retarded and accumulate anthocyanin at the junction between the cotyledons and hypocotyls, corresponding to the shoot apical meristem (SAM). Reduced apical dominance leading to the production of small abnormal flowers, often with altered organ numbers. Infertility due in part to the abnormal development of stamen with under-extended anther filaments that don't release pollen, and due in part to abnormal ovules lacking pollen attractiveness (PubMed:22411811).
messages: Expressed at low levels in floral buds, leaves, stems, roots, and siliques, highest levels being in siliques that contain developing seeds.
messages: Involved in the formation of X-, Y-shaped and twinned plasmodesmata (PD), thus modelating PD size exclusion limit and regulating cell-to-cell transport (PubMed:22411811). Cell cycle checkpoint regulator that monitors and responds to DNA damage such as DNA cross-links, and triggers the halt of the cell cycle progression in the presence of DNA cross-linking agents. Mediates the active process of aluminum- (Al) dependent root growth inhibition and thus is required for response to Al toxicity (PubMed:22345493). Required for both early and late phases of embryo development as well as during seedling growth (PubMed:16113228, PubMed:15266054). Essential for signal transduction and development of both male and female organs (PubMed:22411811).
messages: Nucleus

3702:AT3G51290
gene id: 3702:AT3G51290
uniprot id: A0A178VBJ0
uniprot id: A0A384KMY1
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Defects in primary root elongation and enhanced root hair elongation.
messages: Down-regulated by phosphate deficiency.
messages: Expressed in the root tip of primary and lateral roots, specifically in the meristematic region, including the quiescent center and lateral root cap cells.
messages: Nucleus
messages: Required for the coordination of cell differentiation and cell elongation in the root tip (PubMed:23498857). Required for the coordination of cell processes necessary for correct root growth in response to phosphate starvation, through the modulation of the auxin transporter protein PIN7 (PubMed:23498857).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G44110
gene id: 3702:AT3G44110
uniprot id: Q94AW8
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A heat shock at 35 degrees Celsius for 5 hours resulted in a 5-fold increase in levels.
messages: Belongs to the DnaJ family. A/I subfamily.
messages: Binds 2 Zn(2+) ions per monomer.
messages: Farnesylated.
messages: Homodimer.
messages: Membrane
messages: Plays a continuous role in plant development probably in the structural organization of compartments.
messages: Roots, shoots, flowers, siliques and cotyledons.

3702:AT3G12090
gene id: 3702:AT3G12090
uniprot id: Q9C7C1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tetraspanin (TM4SF) family.
messages: May be involved in the regulation of cell differentiation.
messages: Membrane

3702:AT1G33320
gene id: 3702:AT1G33320
uniprot id: A0A1P8ASJ2
uniprot id: A0A1P8ASL6
uniprot id: Q9C876
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.
messages: Binds 1 pyridoxal 5'-phosphate per subunit.
messages: Catalyzes the first committed step of methionine (Met) biosynthesis. Catalyzes the formation of L-cystathionine from homoserine esters and L-cysteine, via a gamma-replacement reaction.

3702:AT5G20000
gene id: 3702:AT5G20000
uniprot id: A0A178U901
uniprot id: Q94BQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AAA ATPase family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: Nucleus
messages: The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.

3702:AT2G25305
gene id: 3702:AT2G25305
uniprot id: Q3EBU2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G44250
gene id: 3702:AT3G44250
uniprot id: A0A654FDK3
uniprot id: Q9LXM3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT5G65510
gene id: 3702:AT5G65510
uniprot id: A0A1P8BA69
uniprot id: A0A1P8BA85
uniprot id: A0A5S9YHS7
uniprot id: Q6J9N8
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Confined to the central region of inflorescence ane floral meristems, progressively restricted to the innermost cells of the dome. Also detected in developing stamen locules and later in sporogonous cells within locules. In carpel primordia, found in placenta and in young ovule primordia.
messages: Expressed in roots, seedlings, inflorescence, and siliques. Also detected at low levels in leaves.
messages: Interacts with HDG2, and possibly with HDG3, HDG7, ANL2, ATML1 and PDF2.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

3702:AT3G53090
gene id: 3702:AT3G53090
uniprot id: Q9SCQ2
names: Function
names: Similarity
messages: Belongs to the UPL family.
messages: Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins.

3702:AT2G30395
gene id: 3702:AT2G30395
uniprot id: Q84RF2
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: Nucleus
messages: Plants over-expressing OFP17 have no visible phenotype.
messages: Transcriptional repressor that may regulate multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors.

3702:AT1G74070
gene id: 3702:AT1G74070
uniprot id: F4HTT6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Down-regulated by sucrose treatment.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: Ubiquitous. Lower levels of expression in roots.
messages: chloroplast thylakoid

3702:AT5G15010
gene id: 3702:AT5G15010
uniprot id: Q9LFQ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G02950
gene id: 3702:AT3G02950
uniprot id: A0A178VDN6
uniprot id: Q9M8T6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export.
messages: Belongs to the THOC7 family.
messages: Component of the THO complex, which is composed of THO1, THO2, THO3, THO5, THO6 and THO7.
messages: Nucleus

3702:AT1G07630
gene id: 3702:AT1G07630
uniprot id: Q9LQN6
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Expressed in seedlings, roots, leaves, stems, young inflorescences, flowers and siliques.
messages: Involved in leaf development regulation.
messages: Nucleus
messages: Plants show abnormal leaves altered in shape and curling.
messages: The conserved PP2C phosphatase domain (250-651) is interrupted by an insertion of approximately 100 amino acids.

3702:AT5G58450
gene id: 3702:AT5G58450
uniprot id: A0A1P8BDV1
uniprot id: F4KEY9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Auxiliary subunit of the NatB N-alpha-acetyltransferase complex. Required for flowering time regulation and for vegetative and reproductive plant development.
messages: Belongs to the MDM20/NAA25 family.
messages: Cytoplasm
messages: Leaf reticulation, mild leaf folding, early flowering and aborted or unfertilized ovules in siliques (PubMed:24244708). No stunted growth or enhanced resistance to pathogens (PubMed:25966763).
messages: Ubiquitously expressed, with a higher expression in vascular bundles, hydathodes, leaf primordia and the base of the trichomes.

3702:AT4G36480
gene id: 3702:AT4G36480
uniprot id: Q94IB8
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
messages: Defective Embryo and pollen lethality. RNAi mutants display plant size reduction, altered leaf morphology and increases in relative amounts of saturated sphingolipid long-chain bases.
messages: Endoplasmic reticulum membrane
messages: Heterodimer with LCB2 (LCB2a or LCB2b). Component of the serine palmitoyltransferase (SPT) complex, composed of LCB1 and LCB2 (LCB2a or LCB2b).
messages: Serine palmitoyltransferase (SPT). The heterodimer formed with LCB2 constitutes the catalytic core. Involved in the regulation of the programmed cell death (PCD) signaling pathway. Plays an important role during male gametogenesis and embryogenesis.
messages: The fbr11-1 mutant is incapable of initiating programmed cell death (PCD) after induction by fumonisin B1 (FB1), a specific inhibitor of ceramide synthase.
messages: Ubiquitous.

3702:AT2G22480
gene id: 3702:AT2G22480
uniprot id: A0A5S9X096
uniprot id: Q8VYN6
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Allosterically activated by AMP.
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Expressed in roots, leaves, stems and flowers.
messages: Homotetramer.
messages: chloroplast

3702:AT3G49010
gene id: 3702:AT3G49010
uniprot id: A0A384KBX2
uniprot id: A8MQA1
uniprot id: B9DGA4
uniprot id: P41127
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic ribosomal protein eL13 family.
messages: Cytoplasm
messages: Regulated during fruit maturation.

3702:AT5G59570
gene id: 3702:AT5G59570
uniprot id: Q9LTH4
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor that is a critical component of the regulatory circuit of the circadian clock. Binds to specific sites on CCA1 promoter leading to CCA1 activation. Is required for the rhythmic expression of other clock genes such as LHY, GI and APRR1/TOC1.

3702:AT1G80070
gene id: 3702:AT1G80070
uniprot id: A0A178W7J7
uniprot id: Q9SSD2
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Embryonic lethality due to abnormal suspensor development.
messages: Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex (By similarity). Required for embryo development (Ref.3). Required for splicing efficiency of COOLAIR introns and usage of the proximal poly(A) site. COOLAIR is a set of long non-coding antisense transcripts produced at the FLOWERING LOCUS C (FLC). COOLAIR initiates just downstream of the major sense transcript poly(A) site and terminates either early or extends into the FLC promoter region. Splicing of COOLAIR by PRP8A is functionally important for FLC regulation (PubMed:24725596).
messages: Interacts with CLO.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G24570
gene id: 3702:AT3G24570
uniprot id: A0A7G2ERS1
uniprot id: F4J7Q0
uniprot id: Q9LV46
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3702:AT1G61250
gene id: 3702:AT1G61250
uniprot id: A0A5S9WRD9
uniprot id: F4HTI7
uniprot id: Q9M5P2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SCAMP family.
messages: Cell membrane
messages: Membrane
messages: Probably involved in membrane trafficking.
messages: secretory vesicle membrane

3702:AT1G02580
gene id: 3702:AT1G02580
uniprot id: O65312
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. EZ subfamily.
messages: Expressed both maternally and zygotically. Expressed in both egg and central cell before fertilization. After fertilization, it is expressed in the embryo and endosperm, then decreases during seed maturation.
messages: Expressed in unpollinated siliques that contain maturing gametophytes. Not expressed at early stages of floral development during early megagametogenesis.
messages: Interacts directly with FIE via its N-terminal domain. These two proteins are probably indirectly associated with FIS2. In plants, PcG complexes are probably composed of a member of the EZ family (CLF or MEA), FIE, and a member of the VEFS family (FIS2, VRN2 or EMF2). Interacts with TAF13.
messages: Maternal MEA allele is activated by DME but repressed by MET1 in the central cell of the female gametophyte, the progenitor of the endosperm.
messages: Nucleus
messages: Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. Required to prevent the proliferation of the central cell of the female gametophyte by repressing target genes before fertilization. After fertilization, it probably also regulates the embryo and endosperm proliferation and anteroposterior organization during seed development. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. Interacts with the promoter and repress the transcription of genes such as PHE1 and PHE2, that are paternally active and maternally silenced genes.
messages: The MEA locus is imprinted. Maternal inherited gene is expressed in the ovule (the egg and the central cell), while the paternal inherited gene is silenced in the pollen. After fertilization, only the maternal inherited allele is expressed. The paternal repression is dependent on DDM1 protein, which may methylate the paternal locus, while the maternal inherited allele is allowed by the DME protein, which may antagonize or suppress DDM1 dependent methylation, and activates its transcription.

3702:AT5G14060
gene id: 3702:AT5G14060
uniprot id: A0A178UPF4
uniprot id: A0A1P8BBD5
uniprot id: O23653
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Allosterically inhibited by lysine, but not by S-adenosyl-L-methionine (SAM). K(0.5) for lysine in the presence of physiological concentrations of substrates is 12.5 uM. No inhibition by threonine or leucine and no activation or inhibition by alanine, cysteine, isoleucine, serine, valine, methionine, glutamine, asparagine, glutamic acid or arginine.
messages: Belongs to the aspartokinase family.
messages: Expressed in stems, leaves, floral organs and young seedlings.
messages: Involved in the first step of essential amino acids lysine, threonine, methionine and isoleucine synthesis via the aspartate-family pathway.
messages: chloroplast

3702:AT5G40740
gene id: 3702:AT5G40740
uniprot id: Q94BP7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAUS6 family.
messages: Contributes to the assembly of the acentrosomal spindle and phragmoplast microtubule arrays as part of the augmin complex.
messages: Part of the augmin complex composed of 8 subunits. The complex acts on microtubules and interacts with gamma-tubulin in spindles and the phragmoplast.
messages: phragmoplast
messages: spindle

3702:AT1G73830
gene id: 3702:AT1G73830
uniprot id: A0A178W5K6
uniprot id: A0A178W6D3
uniprot id: F4HS06
uniprot id: Q8GWK7
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in stems.
messages: Homodimer.
messages: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid.
messages: No visible phenotype. Redundant with BEE1 and BEE2.
messages: Nucleus
messages: Positive regulator of brassinosteroid signaling.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G35000
gene id: 3702:AT4G35000
uniprot id: A0A5S9XYP8
uniprot id: Q42564
names: Cofactor
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds one cation per subunit; probably K(+), but might also be Ca(2+).
messages: Glyoxysome membrane
messages: Interacts via its C-terminal region with AKR2A and AKR2B.
messages: Peroxisome membrane
messages: Plays a key role in hydrogen peroxide removal.
messages: The transmembrane plays critical roles in migration to the peroxisome and/or subsequent insertion into the membrane.

3702:AT1G69670
gene id: 3702:AT1G69670
uniprot id: A0A654EMI3
uniprot id: Q9C9L0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the cullin family.
messages: Component of the cullin-RING ubiquitin ligases (CRL), or CUL3-RBX1-BTB protein E3 ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the CRL complex depends on the BTB domain-containing protein as the susbstrate recognition component. Involved in embryo pattern formation and endosperm development. Required for the normal division and organization of the root stem cells and columella root cap cells. Regulates primary root growth by an unknown pathway, but in an ethylene-dependent manner. Functions in distal root patterning, by an ethylene-independent mechanism. Functionally redundant with CUL3A.
messages: Expressed in developing and mature reproductive organs and during embryogenesis.
messages: Interacts with BTB/POZ-MATH proteins BPM1 and BPM3.
messages: Neddylated. Deneddylated via its interaction with the COP9 signalosome (CSN) complex.
messages: No visible phenotype. Cul3a and cul3b double mutant is embryonic lethal (PubMed:16045478).

3702:AT4G13570
gene id: 3702:AT4G13570
uniprot id: F4JT33
uniprot id: Q9T0H7
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Not detected by RT-PCR, but promoter weakly active at the margins of leaves and in the root apical and elongation zones.
messages: Not ubiquitinated.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3702:AT2G20530
gene id: 3702:AT2G20530
uniprot id: A0A178VUX3
uniprot id: Q9SIL6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the prohibitin family.
messages: Component of a prohibitin multimeric complex in mitochondrial membranes.
messages: Mitochondrion inner membrane
messages: Mostly expressed in proliferative tissues, including vasculature, shoot and root apical tissues.
messages: Prohibitin probably acts as a holdase/unfoldase for the stabilization of newly synthesized mitochondrial proteins.

3702:AT5G25880
gene id: 3702:AT5G25880
uniprot id: A0A178UAR6
uniprot id: A0A1P8BDF1
uniprot id: A0A1P8BDG6
uniprot id: Q9XGZ0
names: Activity Regulation
names: Caution
names: Cofactor
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the malic enzymes family.
messages: Cytoplasm
messages: Divalent metal cations. Prefers magnesium or manganese.
messages: During embryogenesis, present in the embryo at the globular and heart stages. Detected in the central vasculature of the siliques. During germination, only observed in stipules at the shoot apex and restricted to trichomes of the primary leaves.
messages: Homohexamers and homooctamers.
messages: Mostly expressed in flowers, and, to a lower extent, in stems. In leaves and stems, restricted to the trichomes and trichome basal cells. Also present in the stipules flanking the base of the inflorescence bract leaves and in the meristematic zone of developing lateral roots. In flowers, present in pollen and the abscission zone of developing siliques.
messages: Slightly activated by succinate and aspartate. Repressed by fumarate, malate, oxaloacetate and glucose.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G09210
gene id: 3702:AT1G09210
uniprot id: Q38858
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the calreticulin family.
messages: Can be divided into a N-terminal globular domain, a proline-rich P-domain forming an elongated arm-like structure and a C-terminal acidic domain. The P-domain binds one molecule of calcium with high affinity, whereas the acidic C-domain binds multiple calcium ions with low affinity (By similarity).
messages: Endoplasmic reticulum lumen
messages: Molecular calcium-binding chaperone promoting folding, oligomeric assembly and quality control in the ER via the calreticulin/calnexin cycle. This lectin may interact transiently with almost all of the monoglucosylated glycoproteins that are synthesized in the ER (By similarity).
messages: The interaction with glycans occurs through a binding site in the globular lectin domain.
messages: The zinc binding sites are localized to the N-domain.

3702:AT3G06160
gene id: 3702:AT3G06160
uniprot id: Q9M8K2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G13210
gene id: 3702:AT4G13210
uniprot id: A0A178V021
uniprot id: F4JSA1
uniprot id: Q9SVQ6
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT2G41460
gene id: 3702:AT2G41460
uniprot id: A0A178VMT4
uniprot id: A0A1P8AX21
uniprot id: A0A1P8AX84
uniprot id: B3H7C2
uniprot id: P45951
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DNA repair enzymes AP/ExoA family.
messages: Expressed in the siliques, flowers, and stems (PubMed:7512729). A high level expression is seen in the leaves (PubMed:7512729). Expressed in both vegetative and reproductive organs (PubMed:25228464).
messages: No visible phenotype (PubMed:19372224, PubMed:19172180, PubMed:21781197, PubMed:25569774). Loss of chloroplastic glycosylase-lyase/endonuclease activity (PubMed:19372224). Hypersensitivity to 5-fluorouracil (PubMed:21781197). Ape1l arp double mutants have no visible phenotype (PubMed:19172180). Ape2 arp double mutants have no visible phenotype (PubMed:19172180).
messages: Probably binds two magnesium or manganese ions per subunit.
messages: Repairs oxidative DNA damages, seems also to act as a redox factor (PubMed:7512729). Is multifunctional and may be involved both in DNA repair and in the regulation of transcription (PubMed:7512729). Exhibits apurinic/apyrimidinic (AP) endonuclease activity (PubMed:25569774, PubMed:21781197, PubMed:25228464). Catalyzes the conversion of 3'-phosphor-alpha,beta-unsaturated aldehyde (3'-PUA) to 3'-OH (PubMed:25228464). May be involved in base excision repair in chloroplasts (PubMed:19372224). According to a report, has a significant in vitro 3'-phosphatase activity (PubMed:25228464). According to another report, has no in vitro 3'-phosphatase activity (PubMed:25569774). Has a strong non-specific affinity to DNA (PubMed:25228464).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast nucleoid

3702:AT1G55160
gene id: 3702:AT1G55160
uniprot id: A0A178WCV7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G14430
gene id: 3702:AT4G14430
uniprot id: A0A178UV55
uniprot id: O23299
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Able to isomerize both 3-cis and 3-trans double bonds into the 2-trans form in a range of enoyl-CoA species. Essential for the beta oxidation of unsaturated fatty acids (PubMed:18657232). Involved with IBR1 and IBR3 in the peroxisomal beta-oxidation of indole-3-butyric acid (IBA) to form indole-3-acetic acid (IAA), a biologically active auxin (PubMed:20562230).
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Defective in root hair expansion (PubMed:20562230). Mutant plants are resistant to the inhibitory effect of intermediate levels of indole-3-butyric acid (IBA) and 2,4-DB on root elongation (PubMed:18725356).
messages: Peroxisome
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G73740
gene id: 3702:AT1G73740
uniprot id: Q9C9T8
names: Similarity
messages: Belongs to the glycosyltransferase 28 family.

3702:AT5G09900
gene id: 3702:AT5G09900
uniprot id: A0A178UR80
uniprot id: F4KFD7
uniprot id: Q9FIB6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. Required for gametogenesis and sporophyte development. Acts redundantly with RPN5B.
messages: Belongs to the proteasome subunit p55 family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: Displays a host of morphogenetic defects, including abnormal embryogenesis, partially deetiolated development in the dark, a severely dwarfed phenotype when grown in the light, and infertility.
messages: Nucleus
messages: Ubiquitous with highest expression in flowers.

3702:AT2G28910
gene id: 3702:AT2G28910
uniprot id: A0A178VV16
uniprot id: Q84Y18
names: Caution
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in leaves, stems and roots, and at lower levels in flowers.
messages: Interacts with CAX1.
messages: May regulate CAX1 cation transporter.
messages: Nucleus
messages: Slightly induced by Ca(2+).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G17785
gene id: 3702:AT4G17785
uniprot id: Q8GWP0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G27770
gene id: 3702:AT1G27770
uniprot id: A0A178WD16
uniprot id: A0A1P8AR51
uniprot id: F4HUS8
uniprot id: Q37145
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by calmodulin.
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIB subfamily.
messages: Catalyzes the hydrolysis of ATP coupled with the transport of calcium.
messages: Expressed at higher levels in roots than in leaves.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The N-terminus contains an autoinhibitory calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.
messages: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.
messages: chloroplast inner membrane

3702:AT5G14770
gene id: 3702:AT5G14770
uniprot id: Q9LER0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT2G35060
gene id: 3702:AT2G35060
uniprot id: A0A384KX17
uniprot id: F4IIZ3
uniprot id: O64769
uniprot id: Q0WUH1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Potassium transporter.
messages: Probable potassium transporter.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10950
gene id: 3702:AT1G10950
uniprot id: A0A654E8M8
uniprot id: Q940G0
names: Domain
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: The C-terminal KXD/E motif functions as a Golgi retention signal, certainly through the binding to the COP1 coatomer.
messages: Ubiquitous.

3702:AT4G05460
gene id: 3702:AT4G05460
uniprot id: Q9M0U9
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with CUL1 and SPK1B/ASK2.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT3G45555
gene id: 3702:AT3G45555
uniprot id: A0A5S9XI27
uniprot id: Q4PS42
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT3G23280
gene id: 3702:AT3G23280
uniprot id: Q4FE47
names: Function
messages: No E3 ubiquitin-protein ligase activity observed when associated with the E2 enzyme UBC8 in vitro.

3702:AT1G51600
gene id: 3702:AT1G51600
uniprot id: A0A654EJ17
uniprot id: Q8H1G0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the type IV zinc-finger family. Class C subfamily.
messages: Nucleus
messages: Predominantly expressed in shoot apices, inflorescences and roots.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

3702:AT1G48580
gene id: 3702:AT1G48580
uniprot id: A0A384KLI7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38020
gene id: 3702:AT2G38020
uniprot id: A0A5S9X507
uniprot id: Q93VQ0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Absence of vacuoles in the embryo and accumulation of small vesicles and autophagosomes. Embryo lethality at late torpedo stage.
messages: Belongs to the VPS16 family.
messages: Core component of at least two putative endosomal tethering complexes, the homotypic fusion and vacuole protein sorting (HOPS) complex and the class C core vacuole/endosome tethering (CORVET) complex. Their common core is composed of the class C Vps proteins VPS11, VCL1, VPS18 and VPS33, which in HOPS further associates with VPS39 and VPS41 and in CORVET with VPS3.
messages: Expressed in roots, leaves, stems, siliques, flowers and mature pollen.
messages: Expressed throughout development.
messages: Prevacuolar compartment membrane
messages: Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles.
messages: Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles. Important for the function of both male and female gametophytes, but is not essential for the germination and development of pollen.
messages: Vacuole membrane

3702:AT1G70790
gene id: 3702:AT1G70790
uniprot id: A0A178W9M2
uniprot id: A0A1P8AW00
uniprot id: Q9S7J9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant CAR protein family.
messages: Binds to PYR/PYL/RCAR abscisic acid intracellular receptors in an ABA-independent manner, both at the plasma membrane and in the nucleus.
messages: Cell membrane
messages: Membrane
messages: Nucleus
messages: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (PubMed:25465408).
messages: When associated with disruption in CAR1, CAR4 and CAR5 genes, reduced sensitivity to abscisic acid (ABA) during seedling establishment and root growth regulation.

3702:AT1G30470
gene id: 3702:AT1G30470
uniprot id: A0A654EE40
uniprot id: F4I6B2
uniprot id: F4I6B3
uniprot id: F4I6B4
names: Similarity
messages: Belongs to the SAPS family.

3702:AT5G44200
gene id: 3702:AT5G44200
uniprot id: Q9XFD1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RRM NCBP2 family.
messages: Component of the cap-binding complex (CBC), which binds co-transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary miRNA processing. In the CBC complex, CBP20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ABH1/CBP80 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. CBP20 also plays a role in stabilization of ABH1/CBP80 and ABH1/CBP80 localization to the nucleus. Involved in flowering regulation via its interaction with FRIGIDA.
messages: Component of the nuclear cap-binding complex (CBC), a heterodimer composed of ABH1/CBP80 and CBP20 that interacts with m7GpppG-capped RNA. Interacts with FRIGIDA; the interaction is direct.
messages: Cytoplasm
messages: Expressed in all tissues analyzed, including roots, stems, leaves and flowers.
messages: Hypersensitivity to abscisic acid during germination, significant reduction of stomatal conductance and greatly enhanced tolerance to drought. Plants also display mild developmental abnormalities, such as serrated rosette leaves, delayed development and slightly reduced stature.
messages: In contrast to other organisms, the CBC complex is apparently not essential for nonsense-mediated mRNA decay (NMD) in Arabidopsis.
messages: Nucleus

3702:AT3G26730
gene id: 3702:AT3G26730
uniprot id: A0A1I9LNI8
uniprot id: A0A1I9LNI9
uniprot id: A0A1I9LNJ3
uniprot id: Q9LSE3
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT1G72175
gene id: 3702:AT1G72175
uniprot id: A0A178W9L9
uniprot id: A0A1P8AWL5
uniprot id: Q93WJ5
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G25010
gene id: 3702:AT2G25010
uniprot id: Q9SK32
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as an important factor for cell fate determination and maintenance throughout plant development. Required for the organization of the root apical meristem (RAM) and the shoot apical meristem (SAM). Required to maintain genome stability and cell division activity in meristematic cells.
messages: Expressed in root tips, the shoot apical meristem (SAM), leaves, mature flowers and embryos.
messages: Nucleus
messages: Strong developmental phenotypes, such as extremely short, and agravitropic primary roots, small aerial organ size, altered shape and pale white leaves, bushy inflorescence and reduced number of seeds.

3702:AT4G35950
gene id: 3702:AT4G35950
uniprot id: A0A178UT65
uniprot id: Q9SBJ6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the small GTPase superfamily. Rho family.
messages: Cytoplasm
messages: Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation.
messages: Interacts with SPK1.
messages: May be involved in cell polarity control during the actin-dependent tip growth of pollen tubes.
messages: Membrane
messages: Ubiquitous. Preferentially expressed in mature pollen and pollen tubes.

3702:AT1G17455
gene id: 3702:AT1G17455
uniprot id: A0A178WKX5
uniprot id: Q570U6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EARLY FLOWERING 4 family.
messages: Component of the central CCA1/LHY-TOC1 feedback loop in the circadian clock that promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles.
messages: Follows a light-dependent circadian-regulated expression with a small peak in the evening, about 12 hours after dawn.
messages: Homodimer.
messages: Nucleus

3702:AT3G12120
gene id: 3702:AT3G12120
uniprot id: P46313
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 1 family.
messages: ER (microsomal) omega-6 fatty acid desaturase introduces the second double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes (PubMed:14593172, PubMed:7907506). Delta(12)-desaturase with regioselectivity determined by the double bond (delta(9) position) and carboxyl group of the substrate. Can use both 16:1 and 18:1 fatty acids as substrates (PubMed:8685264). It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine (PC) and, possibly, other phospholipids (PubMed:14593172, PubMed:7907506, PubMed:1730697). Very low constitutive hydroxylation activity (PubMed:11864983). Required for desaturation of fatty acids present in extraplastidial membranes, including mitochondria (PubMed:11104757, PubMed:17507388). Required for salt tolerance during seed germination and early seedling growth (PubMed:22279586).
messages: Endoplasmic reticulum membrane
messages: Enhancement of both microviscosity and lipid/protein ratio of mitochondrial membranes, which in turn were responsible for the change in lateral mobility of lipids and for bioenergetic parameter modifications (PubMed:11104757). Increased membrane rigidity and cold sensitivity (PubMed:17507388). Hypersensitivity to salt or osmotic stress (PubMed:22279586).
messages: Expressed in shoots and roots (PubMed:7907506, PubMed:22279586). Expressed in leaves, stems, flowers and siliques (PubMed:22279586).
messages: Homo- and heterodimer (PubMed:24811169). Interacts with FAD3 but not with FAD6 (PubMed:24811169). FAD2-FAD3 heterodimers can form a metabolic channel in which 18:1-PC is converted to 18:3-PC without releasing a free 18:2-PC intermediate (PubMed:24811169).
messages: Introduction of Ile at position 146 or 324 has a dominant role in specifying hydroxylation activity.
messages: Microsome membrane
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding (Probable). The C-terminal sequence (-YNNKL) is necessary and sufficient for maintaining localization in the endoplasmic reticulum (PubMed:14690501).
messages: Up-regulated by osmotic stress (PubMed:22279586). Not regulated by cold stress (PubMed:7907506).

3702:AT2G06005
gene id: 3702:AT2G06005
uniprot id: A0A1P8AZA1
uniprot id: A0A1P8AZA6
uniprot id: A0A1P8AZA8
uniprot id: A0A1P8AZC6
uniprot id: A0A654EX73
uniprot id: F4IIB8
uniprot id: Q8S8K9
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TMEM192 family.
messages: Interacts with FRI.
messages: Membrane
messages: No visible phenotype under normal growth conditions.

3702:AT2G27340
gene id: 3702:AT2G27340
uniprot id: A0A1P8AY92
uniprot id: F4IFS4
uniprot id: Q6NLZ3
names: Function
names: Similarity
messages: Belongs to the PIGL family.
messages: Involved in the second step of GPI biosynthesis. De-N-acetylation of N-acetylglucosaminyl-phosphatidylinositol.

3702:AT2G20130
gene id: 3702:AT2G20130
uniprot id: Q8VY49
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant COV1 protein family.
messages: Expressed at low levels in flowers, stems, roots and leaves.
messages: Membrane

3702:AT1G49760
gene id: 3702:AT1G49760
uniprot id: A0A5S9WNH7
uniprot id: Q9FXA2
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A.thaliana contains 8 PABP genes.
messages: Belongs to the polyadenylate-binding protein type-1 family.
messages: Binds the poly(A) tail of mRNA.
messages: Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation (By similarity). During infection with potyvirus TuMV, acts as a potential integral component of the viral replicase complex that could play an important role in the regulation of potyviral RNA-dependent RNA polymerase (RdRp) (By similarity).
messages: By potyvirus TuMV infection.
messages: Cytoplasm
messages: Expressed predominantly in immature flowers.
messages: Interacts with ERD15/CID1. Interacts with Turnip mosaic virus (TuMV) VPg-Pro and RNA-dependent RNA polymerase (RdRp).
messages: Nucleus
messages: Pab2 and pab8 double mutants show significant growth and development defects and more resistance to Turnip mosaic virus (TuMV).

3702:AT1G34000
gene id: 3702:AT1G34000
uniprot id: Q9FEC1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ELIP/psbS family.
messages: Component of a high molecular weight complex containing OHP1, OHP2 and HCF244, and PSII core proteins D1/D2, HCF136 and HCF173 (PubMed:29438089). Forms a trimeric complex with OHP1 and HCF244 that mutually stabilizes each subunit (PubMed:29930106, PubMed:30397023).
messages: High light sensitivity leading to stunted growth with pale-green leaves on agar plates, but unable to grow on soil.
messages: Induced by exposure to high light.
messages: May play a photoprotective role within PSI in response to light stress (PubMed:12805611). Forms a trimeric complex with OHP1 and HCF244 that is required to promote PSII core subunit assembly (PubMed:29930106, PubMed:30397023). The trimeric complex forms a transient PSII reaction center-like complex with PsbA, PsbD, PsbE, PsbF and PsbI subunits in thylakoids for early assembly of PSII as well as PSII repair (PubMed:30397023). The trimeric complex is required for the recruitment of ribosomes to the psbA mRNA during PSII biogenesis and repair (PubMed:31991763). Forms an heterodimer with OHP1 that binds chlorophylls and carotenoids, and that may function in the delivery of pigments to the PsbA subunit of PSII (PubMed:32071152).
messages: chloroplast thylakoid membrane

3702:AT5G67420
gene id: 3702:AT5G67420
uniprot id: A0A5S9YID1
uniprot id: Q9FN11
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in young shoots, roots, stems, leaves and flowers.

3702:AT4G31470
gene id: 3702:AT4G31470
uniprot id: A0A178V0S6
uniprot id: Q9SV22
names: Function
messages: Probably involved in the defense reaction of plants against pathogens.

3702:AT1G56450
gene id: 3702:AT1G56450
uniprot id: A0A178WJT5
uniprot id: Q7DLR9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1B family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Non-catalytic component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Non-catalytic component of the proteasome.
messages: Nucleus
messages: Ubiquitous low levels, higher expression in siliques and flowers.

3702:AT1G62010
gene id: 3702:AT1G62010
uniprot id: A0A178W2N1
uniprot id: O80705
names: Similarity
messages: Belongs to the mTERF family.

3702:AT2G18730
gene id: 3702:AT2G18730
uniprot id: A0A178VZY0
uniprot id: Q8VZG1
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic diacylglycerol kinase family.
messages: Monomer.
messages: Phosphorylates the second messenger diacylglycerol (DAG) to generate phosphatidic acid (PA), another important signaling molecule. PA is required for plant development and responses to abiotic stress and pathogen attack.
messages: Phosphorylates the second messenger diacylglycerol (DAG) to generate phosphatidic acid (PA), another important signaling molecule. PA is required for plant development and responses to abiotic stress and pathogen attack. May be involved in the accumulation of PA during cold stress (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G15280
gene id: 3702:AT4G15280
uniprot id: A0A1P8B3E2
uniprot id: A0A654FPF5
uniprot id: O23382
names: Function
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Possesses low quercetin 3-O-glucosyltransferase activity in vitro.

3702:AT2G14260
gene id: 3702:AT2G14260
uniprot id: A0A1P8B2D9
uniprot id: F4IFH2
uniprot id: P93732
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S33 family.
messages: Cytoplasm
messages: Specifically catalyzes the removal of N-terminal proline residues from peptides.

3702:AT2G31510
gene id: 3702:AT2G31510
uniprot id: A0A178VXL6
uniprot id: A0A1P8B027
uniprot id: A0A1P8B029
uniprot id: Q84RR0
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.
messages: Ubiquitous.

3702:AT4G21170
gene id: 3702:AT4G21170
uniprot id: O49558
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G26945
gene id: 3702:AT1G26945
uniprot id: A0A178WEJ4
uniprot id: Q8GW32
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Atypical and probable non DNA-binding bHLH transcription factor that regulates light-mediated responses in day light conditions by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. Forms non-functional heterodimers with HFR1, causing liberation and activation of PIF4 from the transcriptionally inactive HFR1-PIF4 complex.
messages: Belongs to the bHLH protein family.
messages: Circadian regulation with a peak of expression at midday.
messages: Cytoplasm
messages: Gain-of-function mutants kdr-D (T-DNA tagging) show long hypocotyls, pale green and slightly narrow leaves, elongated petioles and early flowering. They are not sensitive to the gibberellin inhibitor paclobutrazol during seed germination (PubMed:16786307).
messages: Interacts with HFR1.
messages: Nucleus

3702:AT5G36120
gene id: 3702:AT5G36120
uniprot id: A0A178UCR5
uniprot id: Q8RWM7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YggT family.
messages: Required for the biogenesis and accumulation of native cytochrome b6 in the thylakoid membrane. Controls the conversion of apocytochrome b6 to holocytochrome b6. Required for covalent binding of the c-type heme to cytochrome b6.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast thylakoid membrane

3702:AT1G15210
gene id: 3702:AT1G15210
uniprot id: A0A178WAD4
uniprot id: Q7PC86
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
messages: Induced by cycloheximide (CHX) and cold/dark treatment.
messages: May be a general defense protein.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous with higher levels in roots.

3702:AT1G13350
gene id: 3702:AT1G13350
uniprot id: A0A1P8ASP4
uniprot id: F4HQR9
uniprot id: Q9FX62
names: Similarity
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family.

3702:AT3G27860
gene id: 3702:AT3G27860
uniprot id: Q9LK91
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PDP family.
messages: Binds to MSI5 (PubMed:29314758). Component of the PRC2 (polycomb repressive complex 2) complex which regulates histone methylation on histone H3K27 (By similarity).
messages: May influence gene expression by regulating the function of the PRC2 complex and modulating H3K27me3 level.
messages: Nucleus

3702:AT1G60660
gene id: 3702:AT1G60660
uniprot id: A0A5S9WRA3
uniprot id: O22704
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome b5 family.
messages: Membrane

3702:AT4G15100
gene id: 3702:AT4G15100
uniprot id: O23364
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expression not detected.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT3G09230
gene id: 3702:AT3G09230
uniprot id: Q42575
names: Induction
names: Subcellular Location Annotation
messages: Nucleus
messages: Slightly induced by salicylic acid.

3702:AT3G04680
gene id: 3702:AT3G04680
uniprot id: A0A178VJP2
uniprot id: Q9SR06
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Clp1 family. Clp1 subfamily.
messages: Interacts with PCFS4 and SYM5. Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits CPSF30, CPSF100, PCFS1, PCFS4, PCFS5, CPSF160 and FY.
messages: Nucleus
messages: Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation (By similarity). Functions in gametophyte, embryo and postembryotic development (PubMed:18971429).
messages: Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation.

3702:AT1G24485
gene id: 3702:AT1G24485
uniprot id: A5PHT0
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G32210
gene id: 3702:AT1G32210
uniprot id: A0A178WL80
uniprot id: A0A1P8AMW1
uniprot id: Q39080
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the DAD/OST2 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.
messages: Ubiquitous.

3702:AT4G30180
gene id: 3702:AT4G30180
uniprot id: Q9SUM5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bHLH protein family.
messages: Nucleus

3702:AT3G27650
gene id: 3702:AT3G27650
uniprot id: A0A178VKF4
uniprot id: Q8L8Q3
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in young shoots, roots, stems, leaves and flowers.

3702:AT5G19180
gene id: 3702:AT5G19180
uniprot id: A0A1P8BGN7
uniprot id: O65041
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-activating E1 family. UBA3 subfamily.
messages: Catalytic subunit of the dimeric E1 enzyme, which activates NEDD8.
messages: Catalytic subunit of the dimeric ECR1-AXR1 E1 enzyme. E1 activates NEDD8/RUB1 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-ECR1 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of RCE1 (By similarity).
messages: Expressed during ovules and embryo development.
messages: Expressed in shoot, root and floral meristems, in vascular tissues of cotyledons and mature leaves, and in the stele of the root.
messages: Heterodimer of UBA3/ECR1 and AXR1. Interacts with NEDD8 and RCE1.
messages: No accumulation in response to auxin treatment.
messages: Nucleus
messages: The formation of the adenylate intermediate is possible in absence of AXR1 and without the participation of Cys-215.

3702:AT1G65520
gene id: 3702:AT1G65520
uniprot id: O04469
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Able to isomerize both 3-cis and 3-trans double bonds into the 2-trans form in a range of enoyl-CoA species. Essential for the beta oxidation of unsaturated fatty acids.
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Peroxisome

3702:AT5G08600
gene id: 3702:AT5G08600
uniprot id: A0A1P8BDG3
uniprot id: F4KB50
uniprot id: Q9FNM8
names: Subcellular Location Annotation
messages: nucleolus

3702:AT3G49220
gene id: 3702:AT3G49220
uniprot id: A0A1I9LRM8
uniprot id: A0A1I9LRM9
uniprot id: A0A654FEB8
uniprot id: Q9M3B0
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in siliques.
messages: Expressed throughout silique development.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: Membrane
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.

3702:AT3G51810
gene id: 3702:AT3G51810
uniprot id: A0A178V532
uniprot id: Q07187
uniprot id: Q42489
names: Caution
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the small hydrophilic plant seed protein family.
messages: By abscisic acid (ABA).
messages: First appears in immature seeds and is maximally expressed in dry seeds.
messages: In seeds only. Specifically located to vascular bundles in the cotyledon and axis of the dry seed. Also found in the epiderm and outer layers of the cortex in the embryo axis.
messages: It is thought to provide protection for the cytoplasm during the desiccation stage of embryo development.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G61440
gene id: 3702:AT3G61440
uniprot id: A0A178VGN1
uniprot id: Q9S757
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a major beta-cyanoalanine synthase. The cyanoalanine synthesis reaction is more efficient than the cysteine synthase activity. Probably unable to interact with SAT and to form the decameric Cys synthase complex (CSC) and is therefore not an enzymatically true OASTL protein. Probably involved in the detoxification of cyanide that arises from ethylene biosynthesis. Maintains a low level of cyanide for proper root hair development.
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.
messages: Defective in root hair formation and accumulates cyanide in root tissues. No effects on growth.
messages: Mainly expressed in mature rosette leaves. Also detected in roots, young rosette leaves, stems, cauline leaves, and flowers.
messages: Mitochondrion

3702:AT3G54470
gene id: 3702:AT3G54470
uniprot id: A0A5S9XKR6
uniprot id: Q42586
names: Similarity
messages: In the C-terminal section; belongs to the OMP decarboxylase family.
messages: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.

3702:AT5G20910
gene id: 3702:AT5G20910
uniprot id: Q8RXD3
names: Disruption Phenotype
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Auto-ubiquitinated.
messages: Cytoplasm
messages: E3 ubiquitin-protein ligase that acts as a negative regulator of abscisic acid (ABA) signaling. Mediates ubiquitination and subsequent proteasomal degradation of the transcription factor ABI3.
messages: Highly expressed in leaves and at lower levels in flowers and seeds.
messages: Hypersensitivity to abscisic acid (ABA).
messages: Interacts with ABI3 (via C-terminus).
messages: Nucleus

3702:AT2G20070
gene id: 3702:AT2G20070
uniprot id: Q9SL74
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G38940
gene id: 3702:AT2G38940
uniprot id: A0A178VRB1
uniprot id: Q96303
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Although related to the sugar transporter family, it does not transport sugars.
messages: Belongs to the major facilitator superfamily. phosphate:H(+) symporter (TC 2.A.1.9) family.
messages: Cell membrane
messages: High-affinity transporter for external inorganic phosphate. Acts as a H(+):phosphate symporter in both low- and high-Pi conditions. Confers sensitivity to arsenate.
messages: In roots by phosphate starvation. Repressed by the Pi analog phosphite (Phi).
messages: Interacts with NLA.
messages: Membrane
messages: Mostly expressed in roots, in tissues connecting the lateral roots to the primary root. Also present in flowers, in senescing anther filaments and in the abscission zone at the base of siliques. Expressed in hydathodes and axillary buds, and in some senescing leaves. After Pi starvation, localized in all cells of undifferentiated root segments, including root tips and root hairs, and in the epidermis, cortex and stellar regions of mature root segments.
messages: Ubiquitinated by NLA. Ubiquitination of PHT1-4 leads to its degradation by the proteasome.

3702:AT5G16440
gene id: 3702:AT5G16440
uniprot id: A0A5S9Y4N3
uniprot id: Q38929
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the IPP isomerase type 1 family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
messages: Cytoplasm
messages: Produced by alternative initiation at Met-59 of isoform 1.
messages: chloroplast

3702:AT5G11440
gene id: 3702:AT5G11440
uniprot id: Q9LYE5
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Tissue Specificity
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Overexpression of CID5/IPD1 leads to increased ploidy levels and longer hypocotyls in dark-grown seedlings compared to wild-type.
messages: Promotes polyploidy in dark-grown seedlings. Regulates the endocycle leading to hypocotyl elongation.
messages: Specifically expressed in immature siliques.
messages: Specifically expressed in mitotically dividing cells of seedlings.

3702:AT5G45900
gene id: 3702:AT5G45900
uniprot id: Q94CD5
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG7 family.
messages: Constitutively expressed (at protein level).
messages: E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes. Involved in the senescence process (PubMed:12070171). Involved in the degradation of damaged peroxisomes (PubMed:24368788). Involved in the non-selective degradation of chlorophylls and photosynthetic proteins during stress-induced leaf yellowing (PubMed:24510943).
messages: Homodimer. Interacts with ATG8 through a thioester bond between Cys-558 and the C-terminal glycine of ATG8 and with ATG12 through a thioester bond between Cys-558 and the C-terminal glycine of ATG12. Interacts also with ATG3 (By similarity).
messages: Increased number of peroxisomes and accumulation of peroxisomal proteins.
messages: The C-terminal residues are required for homodimerization, as well as the interactions with ATG3, ATG8 and ATG12.
messages: The GxGxxG motif is important for the function, possibly through binding with ATP.
messages: Up-regulated during leaf senescence.

3702:AT3G14330
gene id: 3702:AT3G14330
uniprot id: Q9LUL5
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT4G29290
gene id: 3702:AT4G29290
uniprot id: A0A178UXN5
uniprot id: Q9M0F2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G26220
gene id: 3702:AT4G26220
uniprot id: A0A178UVT2
uniprot id: Q9C5D7
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family.
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O-methyltransferase family. CCoAMT subfamily.
messages: Binds 1 divalent metal cation per subunit.
messages: Methylates caffeoyl-CoA to feruloyl-CoA and 5-hydroxyferuloyl-CoA to sinapoyl-CoA. Plays a role in the synthesis of feruloylated polysaccharides. Involved in the reinforcement of the plant cell wall. Also involved in the responding to wounding or pathogen challenge by the increased formation of cell wall-bound ferulic acid polymers (By similarity).

3702:AT1G52290
gene id: 3702:AT1G52290
uniprot id: Q9C821
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Mostly expressed in inflorescence bolts, and, to a lower extent, in flower buds and siliques.

3702:AT3G17430
gene id: 3702:AT3G17430
uniprot id: A0A178VCQ1
uniprot id: A0A384KZW7
uniprot id: Q9LRP2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT1G56440
gene id: 3702:AT1G56440
uniprot id: A0A178WG02
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G14700
gene id: 3702:AT1G14700
uniprot id: A0A178W4D1
uniprot id: A0A1P8ANL8
uniprot id: A0A384LKV7
uniprot id: Q8H129
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 zinc ion per subunit.
messages: Binds 2 iron ions per subunit.
messages: Expressed in stems, leaves, flowers and siliques.
messages: Homodimer.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G22870
gene id: 3702:AT2G22870
uniprot id: A0A178VYL6
uniprot id: O81004
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.

3702:AT1G20010
gene id: 3702:AT1G20010
uniprot id: A0A178W9M8
uniprot id: P29513
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: There are nine genes coding for beta-tubulin.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: cytoskeleton

3702:AT4G04025
gene id: 3702:AT4G04025
uniprot id: A0A1P8B3X9
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT1G52760
gene id: 3702:AT1G52760
uniprot id: Q9C942
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AB hydrolase superfamily. Monoacylglycerol lipase family.
messages: By zinc and H(2)O(2).
messages: Cell membrane
messages: Esterase involved in the biosynthesis of lignin. Hydrolyzes caffeoylshikimate into caffeate and shikimate. Together with 4-coumarate--CoA ligase (4CL), acts on an alternative reaction for the formation of caffeoyl-CoA and bypasses the second reaction of shikimate O-hydroxycinnamoyltransferase (HST). Accepts also 4-coumaroylshikimate as substrate, but with lower activity. According to PubMed:20345607 and PubMed:22915575, posseses monoacylglycerol O-acyltransferase, monoacylglycerol lipase and lysophospholipase activities in vitro. With the association of ACBP2, may promote the degradation of lysophosphatidylcholine and detoxify the peroxidized membrane in response to cadmium-induced oxidative stress. However these results require additional confirmation in vivo.
messages: Expressed in vasculature of roots and leaves, stems, flowers and siliques.
messages: Interacts with ACBP2.
messages: Mutant plants exhibit increased sensitivity to zinc, cadmium and H(2)O(2).
messages: Reduced height and weight of senescent plants due to reduced lignin content.

3702:AT1G13540
gene id: 3702:AT1G13540
uniprot id: A0A178W3B7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G55010
gene id: 3702:AT1G55010
uniprot id: Q9FZ31
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Confers broad-spectrum resistance to pathogens.
messages: Secreted

3702:AT2G48010
gene id: 3702:AT2G48010
uniprot id: P93050
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in the whole plant at low levels.

3702:AT4G05020
gene id: 3702:AT4G05020
uniprot id: A0A178V0K8
uniprot id: F4JGL5
uniprot id: Q94BV7
names: Activity Regulation
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Alternative NADH-ubiquinone oxidoreductase which catalyzes the oxidation of mitochondrial NADH does not translocate protons across the inner mitochondrial membrane (By similarity). Calcium-dependent NAD(P)H dehydrogenase; more efficient on NADH. Binds calcium ions.
messages: Belongs to the NADH dehydrogenase family.
messages: Binds 1 FAD per subunit.
messages: Follows a circadian regulation; up-regulated in a diurnal manner. Accumulates in response to ammonium but repressed by nitrate. Induced by chloramphenicol (Chl), paraquat (Par), rotenone (Rot) and salicylic acid (SA).
messages: Mitochondrion inner membrane
messages: Mostly expressed in seedlings and roots and, to a lower extent, in cotyledons, leaves, stems, buds and flowers.
messages: NADPH oxidase activity is stimulated by calcium ions.
messages: Peroxisome

3702:AT1G09070
gene id: 3702:AT1G09070
uniprot id: O04023
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: By cold stress in roots.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Interacts with RBOHF (via N-terminus).
messages: May act as an activator of the calcium-dependent activation of RBOHF that mediates reactive oxygen species (ROS) production and may play a role in cold responses.
messages: Protein storage vacuole membrane

3702:AT5G15280
gene id: 3702:AT5G15280
uniprot id: Q9LXF4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G20620
gene id: 3702:AT5G20620
uniprot id: P0CH32
uniprot id: Q1EC66
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family.
messages: Cytoplasm
messages: For the sake of clarity sequence features are annotated only for the first chain, and are not repeated for each of the following chains.
messages: Nucleus
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT1G17040
gene id: 3702:AT1G17040
uniprot id: B5X561
names: PTM
names: Tissue Specificity
messages: Expressed in roots, leaves, stems and flowers.
messages: Phosphorylated on tyrosine residues.

3702:AT5G08460
gene id: 3702:AT5G08460
uniprot id: Q9FNP2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT2G20260
gene id: 3702:AT2G20260
uniprot id: A0A5S9WZU5
uniprot id: Q9S714
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 2 isoforms may exist. With or without the N-terminal alanine (By similarity).
messages: Belongs to the PsaE family.
messages: Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase.
messages: chloroplast thylakoid membrane

3702:AT2G36100
gene id: 3702:AT2G36100
uniprot id: A0A178VVX3
uniprot id: Q9SIH4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Disorganised deposition of Casparian strips.
messages: Homodimer and heterodimers with other CASP proteins. Interacts with CASP2, CASP3, CASP4 and CASP5.
messages: Homodimer and heterodimers.
messages: Membrane
messages: Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

3702:AT2G36370
gene id: 3702:AT2G36370
uniprot id: Q8S8F2
names: Caution
names: Domain
names: Function
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.
messages: Was originally thought to contain a F-box domain.

3702:AT1G18170
gene id: 3702:AT1G18170
uniprot id: Q9LDY5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
messages: chloroplast thylakoid lumen

3702:AT5G02620
gene id: 3702:AT5G02620
uniprot id: A0A1P8BFK5
uniprot id: Q6AWW5
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G54810
gene id: 3702:AT3G54810
uniprot id: A0A654FH50
uniprot id: B9DHF1
uniprot id: Q9SV30
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT1G21690
gene id: 3702:AT1G21690
uniprot id: A0A178WH05
uniprot id: F4HY43
uniprot id: F4HY45
uniprot id: F4HY46
uniprot id: Q93ZX1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the activator 1 small subunits family.
messages: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can form a complex with RFC1.
messages: May be involved in DNA replication and thus regulate cell proliferation.
messages: Nucleus

3702:AT2G40030
gene id: 3702:AT2G40030
uniprot id: Q5D869
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RNA polymerase beta' chain family.
messages: Blocked in the perpetuation of CNN, CG and CNG methylation in repeated endogenous DNA accompanied by a reduction in 24-nt siRNAs. Reduction of heterochromatin association into chromocenters, coincident with losses in cytosine methylation at pericentromeric 5S gene clusters and AtSN1 retroelements. Impaired RNA-directed DNA methylation-dependent (RdDM) silencing. Defective in the maintenance of post-transcriptional RNA silencing.
messages: Component of the RNA polymerase V complex. Interacts with NRPD4, NRPD2A, and (via C-terminus) with AGO4. Interacts with SUVH2.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase V involved in RNA-directed DNA methylation-dependent (RdDM) silencing of endogenous repeated sequences, including transposable elements. Also required for full erasure of methylation when the RNA trigger is withdrawn. Seems also involved in the synthesis of short-interfering RNAs (siRNA). Essential component of a self-reinforcing loop coupling de novo DNA methylation to siRNA production. Involved in the maintenance of post-transcriptional RNA silencing.
messages: Mostly expressed in flowers, and, to a lower extent, in leaves. Present in sperm cells.
messages: WG/GW repeats are involved in AGO4 binding.
messages: nucleolus

3702:AT2G43650
gene id: 3702:AT2G43650
uniprot id: Q8L3P4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Thallo' is the Greek goddess of buds and shoots.
messages: Belongs to the SAS10 family.
messages: Embryo defective arrested at the cotyledon stage, associated with enlarged nucleoli probably due to the over-accumulation of pre-rRNAs.
messages: Essential protein during embryogenesis (PubMed:15266054, PubMed:27792779). Involved both in gene transcription regulation and in processing events critical for proper rRNA biogenesis and nucleolar organization during reproduction; contributes to pre-rRNA processing at the 5' external transcribed spacer (PubMed:27792779). Binds RNA (By similarity).
messages: In seedlings, observed in the subapical region of primary roots, lateral root primordia, leaf veins and around guard cells (PubMed:27792779). In flowers, present in ovules, pollen, embryos and endosperm (PubMed:27792779).
messages: Interacts with NUCL1, NUCL2, JMJ14, NOF1 and MPP10 in the nucleus.
messages: Mainly present in tissues undergoing rapid cellular growth and differentiation (PubMed:27792779). Mostly expressed in shoots and flowers, and, to a lower extent, in leaves, siliques, roots and seedlings (PubMed:27792779).
messages: Nucleus
messages: nucleolus

3702:AT5G20090
gene id: 3702:AT5G20090
uniprot id: A0A178UR79
uniprot id: B3H6E6
uniprot id: Q949R9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.
messages: Mediates the uptake of pyruvate into mitochondria.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT5G16530
gene id: 3702:AT5G16530
uniprot id: A0A178UIR3
uniprot id: A0A1P8BEE7
uniprot id: Q9FFD0
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Auxin transporter regulating intracellular auxin homeostasis and metabolism (PubMed:19506555, PubMed:20439545). Mediates the auxin transport from the cytosol into the lumen of the endoplasmic reticulum (PubMed:19506555). May also act as an auxin efflux carrier when located to the cell membrane (PubMed:24692422). PIN5 and PIN8 may have an antagonistic/compensatory activity (PubMed:22760640, PubMed:22990451). Involved in unfolded protein response (UPR) activation (PubMed:24180465). Involved in the control of vein patterning (PubMed:24304505). Promotes vein formation (PubMed:26560462). PIN5, PIN6, and PIN8 control vein network geometry, but they are expressed in mutually exclusive domains of leaf vascular cells (PubMed:26560462).
messages: Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
messages: Cell membrane
messages: Defects in lateral root initiation and in root and hypocotyl growth. Increased levels of endogenous free auxin.
messages: Down-regulated upon auxin treatment (PubMed:19506555). Down-regulated by endoplasmic reticulum stress treatment (PubMed:24180465).
messages: Endoplasmic reticulum membrane
messages: Expressed in elongating parts of hypocotyl, cotyledon vasculature and guard cells (PubMed:19506555, PubMed:24692422). Detected in root pericycle and root tip and at later developmental stages in leaves, stems and flowers (PubMed:19506555, PubMed:24692422). Expressed in veins of mature leaves (PubMed:26560462).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May act as a component of the auxin efflux carrier.
messages: Membrane

3702:AT2G27460
gene id: 3702:AT2G27460
uniprot id: Q9ZQH3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
messages: COPII-coated vesicle membrane
messages: Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER) (By similarity). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity). May contribute to COPII-coated vesicles formation and ER-Golgi vesicle transport (PubMed:29390074). Together with SEC23A, essential for pollen wall development and exine patterning, probably by regulating endoplasmic reticulum (ER) export of lipids and proteins (e.g. sporopollenin) necessary for pollen wall formation (PubMed:29390074). Also involved in plastid physiology in anther tapetal cells (PubMed:29390074).
messages: Component of the coat protein complex II (COPII), composed of at least five proteins: the Sec23/24 complex, the Sec13/31 complex and Sar1.
messages: Despite normal fertility, impaired pollen coat exine pattern formation with reduced sporopollenin levels (PubMed:29390074). Plants lacking both SEC23A and SEC23D are semi-sterile and exhibit developmental defects in pollen (especially at the late uninucleate stage) and tapetal cells, including defective exine and intine, as well as signs of cell degeneration and structural abnormalities in organelles of the male gametophytes (PubMed:29390074).
messages: Endoplasmic reticulum membrane
messages: In floral organs, only observed in buds, pollen grains, pollen tubes and fertilized ovules (PubMed:29390074). Highly expressed in the anther tapetum at uninucleate and bicellular stages (PubMed:29390074).
messages: Membrane
messages: Mostly expressed in closed floral bud, pollen and flowers, and, to a lower extent, in mature siliques, roots and leaf primordia.

3702:AT1G75200
gene id: 3702:AT1G75200
uniprot id: A0A178W4L9
uniprot id: Q8RXN5
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the TYW1 family.
messages: Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Probable component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine, an intermediate in wybutosine biosynthesis (By similarity).
messages: Probable component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine, an intermediate in wybutosine biosynthesis.

3702:AT4G01395
gene id: 3702:AT4G01395
uniprot id: A0A654FKX3
uniprot id: Q8L838
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the COG4 family.
messages: Component of the conserved oligomeric Golgi complex which is composed of eight different subunits and is required for normal Golgi morphology and localization (Probable). Interacts with COG2 and COG3 (PubMed:27448097).
messages: Golgi apparatus membrane
messages: Required for normal Golgi function.

3702:AT2G41230
gene id: 3702:AT2G41230
uniprot id: A0A178VRU5
uniprot id: Q8RWS1
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant organ size related (OSR) protein family.
messages: Cytoplasm
messages: Detected in leaf primordia. In leaves, present in the blade and the petiole, especially at the dispersed meristematic regions and the leaf margin. Accumulates in floral organs.
messages: Endoplasmic reticulum
messages: Induced by ethylene but repressed by abscisic acid (ABA) and epi-brassinolide (epi-BL) treatments.
messages: Membrane
messages: Mostly expressed in flowers, and, to a lower extent, in leaves and cotyledons.
messages: Nucleus
messages: The OSR domain is sufficient to promote organ growth.
messages: Together with ARGOS and ARL, regulates organ growth and final organ size. Promotes both cell expansion and proliferation-dependent organ growth, in an ANT-dependent manner.
messages: When associated with ARGOS disruption, reduction in organ size.

3702:AT4G35790
gene id: 3702:AT4G35790
uniprot id: A0A178UUU1
uniprot id: A0A5S9XYZ0
uniprot id: F4JNU6
uniprot id: Q9C5Y0
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by free oleic acid in a dose-dependent manner and less effectively by other unsaturated fatty acids such as linoleic and linolenic acids (PubMed:11706190). Not activated by the saturated fatty acids stearic and palmitic acids (PubMed:11706190). PIP2 and Ca(2+) stimulate activity by promoting lipid substrate binding to the active site (PubMed:12397060). Activated by H(2)O(2) and by binding to GAPC (PubMed:14508007, PubMed:22589465).
messages: Belongs to the phospholipase D family. C2-PLD subfamily.
messages: By salt stress or dehydration, in vascular tissues of roots, cotyledons and leaves (PubMed:11489173, PubMed:19017627). Not induced cold stress (PubMed:11489173). Up-regulated by abscisic acid in rosette leaves (PubMed:22932846, PubMed:22392280).
messages: C2 domain is a calcium-binding fold, and the binding promotes the protein association with membranes. In PLD delta, all the calcium-coordinating acidic amino acids are conserved.
messages: Ca(2+). Requires millimolar level (PIP2-dependent).
messages: Cell membrane
messages: Expressed in roots, leaves, stems, siliques and flowers (PubMed:11706190, PubMed:11489173). Strongly expressed in the vascular tissues of cotyledons and leaves under dehydration stress conditions (PubMed:11489173). Expression is higher in old leaves than in young leaves (PubMed:11706190). Expressed in leaves and guard cells (PubMed:22932846). The isoform 2 may not be present in siliques.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). May be involved in PA accumulation in the dehydration stress response and in the transduction of hormonal and environmental signals to the microtubules cytoskeleton (PubMed:11549769, PubMed:11489173, PubMed:12881496). Prefers phosphatidylethanolamine to phosphatidylcholine as substrate (PubMed:12397060). Involved in H(2)O(2) and abscisic acid (ABA)-induced stomatal closure (PubMed:22589465, PubMed:22392280). Involved in nitric oxide (NO) signaling during stomatal closure (PubMed:22932846). Plays a positive role in ABA-promoted senescence (PubMed:23762411). Involved in basal defense and nonhost resistance (PubMed:23979971).
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
messages: Interacts with GAPC1 and GAPC2. Increased interaction in the presence of H(2)O(2).
messages: No visible phenotype when grown under standard conditions (PubMed:22932846). Loss of oleate-activated PLD activity and increased sensitivity to stress damage and to H(2)O(2)-induced cell death (PubMed:14508007). Hypersensitivity to hyperosmotic stress (PubMed:19017627). Impaired stomatal closure in response to nitric oxide donor (PubMed:22932846). Attenuated lipid degradation retarding abscisic acid (ABA)-promoted leaf senescence (PubMed:23762411). Decreased penetration resistance against non-host fungi (PubMed:23979971). No effect on ABA-induced stomatal closure (PubMed:22392280). Pldalpha1 and plddelta double mutants have a suppressed ABA-induced stomatal closure (PubMed:22392280).

3702:AT3G28210
gene id: 3702:AT3G28210
uniprot id: A0A178VHW6
uniprot id: Q67YE6
names: Function
messages: May be involved in environmental stress response.

3702:AT1G60970
gene id: 3702:AT1G60970
uniprot id: Q940S5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes small subunit family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex (By similarity).

3702:AT1G65070
gene id: 3702:AT1G65070
uniprot id: A0A178WFQ3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G01820
gene id: 3702:AT2G01820
uniprot id: A0A654ER58
uniprot id: Q9SIT1
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed in roots, leaves, stems, siliques and flowers.
messages: Involved in auxin signal transduction and cell expansion and proliferation regulation (PubMed:23613767).
messages: Membrane
messages: No visible phenotype (PubMed:23613767). Tmk1 and tmk3 double mutants, tmk2 and tmk3 double mutants, tmk3 and tmk4 double mutants, tmk1, tmk2 and tmk3 triple mutants and tmk2, tmk3 and tmk4 triple mutants have no visible phenotypes (PubMed:23613767). Tmk1, tmk3 and tmk4 triple mutants have a severe reduction in organ size, a substantial delay in growth and development, and a decrease in fertility (PubMed:23613767). Tmk1, tmk2, tmk3 and tmk4 quadruple mutants are embryo lethal (PubMed:23613767, PubMed:24578577).
messages: The leucine-rich repeat (LRR) domain is disrupted by a non-LRR region, resulting in the formation of two LRR solenoid structures shaped like the Arabic number '7'. This is strikingly different from the horseshoe structures of the canonical LRR proteins.

3702:AT1G72180
gene id: 3702:AT1G72180
uniprot id: Q9C7T7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in mature leaves, primary roots, and the root tips of both primary and lateral roots.
messages: Interacts with the root-derived peptide CEP1 (PubMed:25324386). Binds to the ammonium transporter AMT1-1 (PubMed:21423366).
messages: Receptor kinase involved in the perception of C-terminally encoded plant signaling peptide (CEP) and subsequent regulation of root and shoot development. Together with CEPR1, mediates systemic nitrogen (N)-demand signaling upon the perception of root-derived peptides (e.g. CEP1) via the up-regulation of genes involved in N uptake and assimilation pathways.
messages: The double mutant cepr1 cepr2 is insensitive to CEP1 in a root growth regulation and exhibit pleiotropic phenotype characterized by pale-green leaves and enhanced lateral root elongation. At adult stage, smaller rosette leaves and shorter floral stems, accompanied by anthocyanin accumulation. Down-regulation of genes involved in N uptake and assimilation pathways (e.g. NRT1.1, NRT2.1 and NRT3.1) leading to impaired nitrate uptake activity. Altered systemic induction of genes involved in N uptake and assimilation pathways in N-depletion conditions (PubMed:25324386). Increased resistance to osmotic stress (e.g. mannitol) (PubMed:21431781).

3702:AT1G42615
gene id: 3702:AT1G42615
uniprot id: A0A1P8AW93
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRN7/TAF1B family.
messages: nucleolus

3702:AT2G29050
gene id: 3702:AT2G29050
uniprot id: A0A654EYK0
uniprot id: Q0WQX7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S54 family.
messages: Expressed in roots, seedlings, leaves, stems and flowers.
messages: Golgi apparatus membrane
messages: Membrane
messages: No visible phenotype.
messages: Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis. Unable to cleave the Drosophila protein Spitz.

3702:AT2G19340
gene id: 3702:AT2G19340
uniprot id: O64567
uniprot id: Q8VYT4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OSTC family.
messages: Membrane

3702:AT1G18480
gene id: 3702:AT1G18480
uniprot id: Q944L7
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the metallophosphoesterase superfamily. SLP family.
messages: Binds 2 manganese ions per subunit.
messages: By infection with the bacterial pathogen P.syringae.
messages: Expressed in roots and siliques (at protein level).
messages: No visible phenotype under normal growth conditions.
messages: Shows phosphatase activity, hydrolyzing the artificial substrate para-nitrophenylphosphate (pNPP) in vitro.
messages: cytosol

3702:AT3G09270
gene id: 3702:AT3G09270
uniprot id: A0A5S9XAP1
uniprot id: Q9SR36
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT4G26020
gene id: 3702:AT4G26020
uniprot id: Q1PE49
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Endoplasmic reticulum
messages: Expressed in leaves (at protein level).
messages: Interacts with viral tomato spotted wilt virus (TSWV) movement protein NSM, which is involved in cell-to cell spread of viral genome and enlargement of the host plasmodesmata size exclusion limit (SEL).
messages: Involved in intra- and inter-cellular trafficking through plasmodesmata (PD).
messages: The C-terminal part of the protein in required for plasmodesma localization.
messages: plasmodesma

3702:AT5G01820
gene id: 3702:AT5G01820
uniprot id: Q9LZW4
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
messages: By light in a cytokinin-dependent manner and N(6)-benzylaminopurine (BA). Also induced by sucrose, glucose and fructose. Induced by several abiotic stresses like salt, cold, heat, oxidative, drought, PEG8000, glucose treatments as well exogenous abscisic acid (ABA) application (PubMed:25058458).
messages: CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity).
messages: Cytoplasm
messages: First observed in imbibed seeds. Mostly localized in hypocotyls during germination and in seedlings. In mature plants, confined to vascular tissues of leaves and roots. In flowers, expressed in the vascular bundle of the stamen filament and in the stigma, where the filament joins the pistil.
messages: Increased sensitivity to glucose.
messages: Interacts with CBL2 (PubMed:11577192, PubMed:19832944, PubMed:18237745, PubMed:25058458). Interacts with CBL3 (PubMed:19832944, PubMed:25058458). Interacts with CBL8 (PubMed:19832944). Interacts with CBL9 (PubMed:25058458). Interacts with KIN10 and KIN11 (PubMed:25058458).
messages: Nucleus
messages: Predominant in roots, cauline leaves, and flowers (PubMed:11577192). Ubiquitous with highest expression in 7-day-old seedlings and flower buds, followed by that in cauline leaves and young siliques (PubMed:25058458).
messages: The activation loop within the kinase domain is the target of phosphorylation/activation by upstream protein kinases. The PPI motif mediates the interaction with the ABI (abscisic acid-insensitive) phosphatases (By similarity).

3702:AT2G19170
gene id: 3702:AT2G19170
uniprot id: A0A178VWQ1
uniprot id: O64481
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the peptidase S8 family.
messages: By methyl jasmonate.
messages: Expressed in roots, leaves and flowers of mature plants.

3702:AT4G26970
gene id: 3702:AT4G26970
uniprot id: A0A178UVE5
uniprot id: Q94A28
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the aconitase/IPM isomerase family.
messages: Binds 1 [4Fe-4S] cluster per subunit.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.
messages: Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Contributes to oxidative stress tolerance (PubMed:17013749). Involved in acetate assimilation (PubMed:25061985).
messages: Mitochondrion
messages: Monomer.
messages: Mostly expressed in roots, leaves and flowers, also present in stems, and, at low levels, in seeds.
messages: Reduced mitochondrial aconitase (ACO) activity by 20 percent (PubMed:17013749, PubMed:17437406). Increased tolerance to oxidative stress mediated by paraquat, a superoxide-generating agent (PubMed:17013749). Altered acetate assimilation leading to lower levels of CO(2), CHO and SO, and higher OAs (organic acids) accumulation, especially fumarate (PubMed:25061985).
messages: Slight level decrease after 3 days of iron starvation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G19960
gene id: 3702:AT4G19960
uniprot id: A0A1P8B951
uniprot id: A0A1P8B977
uniprot id: F4JU14
uniprot id: O49423
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Potassium transporter.
messages: Putative potassium transporter.

3702:AT4G30920
gene id: 3702:AT4G30920
uniprot id: A0A654FUF0
uniprot id: Q944P7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M17 family.
messages: Binds 2 Mn(2+) ions per subunit.
messages: Functions as molecular chaperone to protect proteins from heat-induced damage.
messages: Homohexamer (dimer of homotrimers).
messages: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity). Possesses leucine aminopeptidase activity against the model substrate leucine-amido methyl coumarin (PubMed:22493451). Does not seem to possess Cys-Gly dipeptidase activity (PubMed:25716890).
messages: chloroplast

3702:AT1G17920
gene id: 3702:AT1G17920
uniprot id: A0A654EAX3
uniprot id: C0SUW2
uniprot id: Q9LMT8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: During embryo development, expressed in all cells at the 4- and 16-cell embryo stages (PubMed:25564655). Expression is restricted to the protoderm from the globular stage onward (PubMed:25564655). In primary and lateral roots, observed in the epidermis, the outer layer of columella cells and lateral root cap (PubMed:25564655).
messages: Expressed in apical meristems and young epidermal tissue including trichomes and stipules. Expressed in lateral root tips, the L1 layer of apical inflorescence meristems and early flower primordia, carpel and stamen filament epidermis, stigma papillae, ovule primordia, nucellus and embryo.
messages: Interacts with BBM.
messages: Intron retention.
messages: No visible phenotype under normal growth conditions, but the double mutants hdg11 and hdg12 exhibit excess branching of trichomes (PubMed:16778018). The double mutant pdf2-1 hdg12-2 exhibits abnormal flowers with sepaloid petals and carpelloid stamens in association with a reduced expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers (PubMed:23590515).
messages: Nucleus
messages: Probable transcription factor that acts as negative regulator of trichome branching in association with HDG11 (PubMed:16778018). Seems to promote cell differentiation (PubMed:25564655). May regulate cell differentiation and proliferation during root and shoot meristem development (PubMed:25564655). Acts as positive regulator of SCL18/LAS expression (PubMed:25358340). Involved, together with PDF2, in the regulation of flower organs development by promoting the expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers (PubMed:23590515).

3702:AT3G47040
gene id: 3702:AT3G47040
uniprot id: A0A1I9LQK9
uniprot id: A0A1I9LQL0
uniprot id: F4JAB7
uniprot id: Q9SD69
names: Similarity
messages: Belongs to the glycosyl hydrolase 3 family.

3702:AT3G23990
gene id: 3702:AT3G23990
uniprot id: A0A178VEN0
uniprot id: P29197
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the chaperonin (HSP60) family.
messages: By heat shock.
messages: Implicated in mitochondrial protein import and macromolecular assembly. May facilitate the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix.
messages: Mitochondrion

3702:AT1G77540
gene id: 3702:AT1G77540
uniprot id: Q9CAQ2
names: Function
names: Subcellular Location Annotation
messages: Peroxisome
messages: Possesses in vitro histone acetyltransferase activity with histones H3 and H4.

3702:AT4G37930
gene id: 3702:AT4G37930
uniprot id: A0A178UYX1
uniprot id: Q9SZJ5
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SHMT family.
messages: Circadian-regulation. Induction by light.
messages: Cytoplasm
messages: Displays a lethal photorespiratory phenotype when grown at ambient carbon dioxide.
messages: Functions in the photorespiratory pathway in catalyzing the interconversion of serine and glycine. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.
messages: Homotetramer (By similarity). Interacts with GLU1 (PubMed:19223513). Interacts with UBP16 (PubMed:23232097).
messages: Interconversion of serine and glycine.
messages: Mitochondrion
messages: Recessive mutant shmt1-1 (shm1-3) shows enhanced susceptibility to salt stress and to biotrophic and necrotrophic pathogens.
messages: Ubiquitinated.
messages: Ubiquitous. Mostly expressed in leaves, less abundant in stems, flowers and siliques, and barely detectable in roots.

3702:AT4G11911
gene id: 3702:AT4G11911
uniprot id: A0A1P8B3H1
uniprot id: A0A654FNF5
uniprot id: B3H593
names: Similarity
messages: Belongs to the staygreen family.

3702:AT5G04040
gene id: 3702:AT5G04040
uniprot id: A0A178UB07
uniprot id: Q9LZA6
names: Activity Regulation
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PLPL family.
messages: Expressed in roots, leaves and stems.
messages: Inhibited by diethyl-p-nitrophenyl phosphate, diisopropyl fluorophosphate and [E]-6-[bromoethylene]-3-[1-naphthalenyl]-2H-tetrahydropyran-2-one.
messages: Involved in the release of fatty acids from the oil body in germinating seedlings (PubMed:16473965, PubMed:19136267, PubMed:27466365). Can hydrolyze triacylglycerols and diacylglycerols but not monoacylglycerols, phospholipids, galactolipids or cholesterol esters (PubMed:16473965, PubMed:19136267). SDP1 lipase activity is required to limit triacylglycerol accumulation in roots, leaves and stems, which are vegetative tissues (PubMed:23686420). Functions synergistically with PDAT1 in regulating fatty acid flow from membrane lipid synthesis toward peroxisomal beta-oxidation through a transient triacylglycerol pool (PubMed:25293755).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Lipid droplet
messages: Membrane
messages: Not impaired in germination, but much slower rate of postgerminative growth.
messages: Peroxisome
messages: Transcript levels do not correlate positively with enzyme activity, suggesting a post-transcriptional regulation.
messages: Transcript levels increase at the beginning of seed maturation and remain high until seed desiccation is completed. High levels early in seed imbibition, but decline as the seed germinates.

3702:AT1G06650
gene id: 3702:AT1G06650
uniprot id: A0A178W9Q8
uniprot id: Q8H1S4
names: Miscellaneous
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: May be due to a competing acceptor splice site.

3702:AT1G49810
gene id: 3702:AT1G49810
uniprot id: A0A654EH64
uniprot id: Q9C6D3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NhaD Na(+)/H(+) (TC 2.A.62) antiporter family.
messages: Membrane
messages: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons.

3702:AT1G63480
gene id: 3702:AT1G63480
uniprot id: A0A1P8AU89
uniprot id: Q8LPN5
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer. Interacts with AHL27, AHL29 and ATAF2/NAC081.
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT2G46950
gene id: 3702:AT2G46950
uniprot id: F4IK45
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By salt stress.
messages: Highly expressed in siliques and at lower levels in flowers and rosette leaves.
messages: Involved in stress response (By similarity). Does not function as cytokinin hydroxylase in yeast heterologous system (Probable).
messages: It is uncertain whether Met-1 or Met-56 is the initiator.
messages: Membrane
messages: No visible phenotype under normal growth conditions.

3702:AT1G04690
gene id: 3702:AT1G04690
uniprot id: A0A178WF48
uniprot id: O23016
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the shaker potassium channel beta subunit family.
messages: Expressed in roots, leaves and flowers (at protein level).
messages: Forms heteromultimeric complexes with potassium channel alpha subunits.
messages: Probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.

3702:AT1G33840
gene id: 3702:AT1G33840
uniprot id: A0A1P8AVP9
uniprot id: Q9LQ36
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

3702:AT1G49350
gene id: 3702:AT1G49350
uniprot id: Q94AT3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the carbohydrate kinase PfkB family.
messages: Catalyzes the phosphorylation of pseudouridine to pseudouridine 5'-phosphate (PsiMP) (PubMed:31907295). Catalyzes the first step in a pseudouridine degradation pathway (PubMed:31907295). Acts together with the pseudouridine 5'-phosphate glycosidase PUMY in the peroxisome to prevent toxic pseudouridine monophosphate accumulation (PubMed:31907295).
messages: Forms homodimers.
messages: Peroxisome

3702:AT5G42232
gene id: 3702:AT5G42232
uniprot id: Q2V321
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G20920
gene id: 3702:AT5G20920
uniprot id: Q41969
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the eIF-2-beta/eIF-5 family.
messages: Heterotrimer composed of an alpha, a beta and a gamma chain.
messages: May be due to a competing acceptor splice site.
messages: Phosphorylated at Ser-42, Ser-80 and Ser-112 by CK2.
messages: eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B (By similarity).

3702:AT5G27310
gene id: 3702:AT5G27310
uniprot id: Q3E914
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G38000
gene id: 3702:AT4G38000
uniprot id: A0A384KID3
uniprot id: Q0WQS4
uniprot id: Q84K52
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Highly expressed at the base of all organs of the flower, especially in the abscission zone (AZ) of petals, stamens and sepals. Expressed at low levels in sepals, filaments, stigmatic papillae, tips of young siliques, and at the base of pedicels and leaf trichomes.
messages: Interacts with ZFP2.
messages: Nucleus
messages: Plants over-expressing DOF4.7 fail in the abscission of floral organs (sepals, petals and stamens) after anthesis.
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Involved in the negative regulation of floral organ abscission by binding to the typical DOF 5'-AAAG-3' sequences in the promoter of ADPG2/PGAZAT, and by down-regulating its expression. ADPG2/PGAZAT is an abscission-related and cell wall hydrolyzing polygalacturonase. May act through the interaction with ZFP2, an abscission-related transcription factor.

3702:AT3G54430
gene id: 3702:AT3G54430
uniprot id: A0A5S9XKR3
uniprot id: Q9M2U4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SHI protein family.
messages: Nucleus
messages: Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM) (By similarity).

3702:AT2G44590
gene id: 3702:AT2G44590
uniprot id: B5X4Z5
uniprot id: Q8S3C9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
messages: Cytoplasm
messages: Forms homodimer and may homooligomerize and heterooligomerize to form the phragmoplastin complex (By similarity). Binds to PHIP1 (PubMed:18621982).
messages: May be due to a competing acceptor splice site.
messages: May be due to competing acceptor splice sites.
messages: Putative microtubule-associated force-producing protein. Has a GTPase activity (By similarity).
messages: cytoskeleton

3702:AT1G16160
gene id: 3702:AT1G16160
uniprot id: A0A178W9G0
uniprot id: Q9S9M1
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Induced by INA and wounding.
messages: Membrane
messages: Preferentially expressed in roots and flowers.
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. May be involved in plant's response to pathogen infection.
messages: The EGF-like region is specific to this family of proteins and seems to consist of the C-terminal of an EGF-like domain fused to the N-terminal of another one.

3702:AT3G12000
gene id: 3702:AT3G12000
uniprot id: A0A384KCW1
uniprot id: Q9LHM1
names: Caution
names: Function
messages: Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G46750
gene id: 3702:AT5G46750
uniprot id: Q9FIQ0
names: Function
messages: GTPase-activating protein (GAP) for ADP ribosylation factor (ARF).

3702:AT3G59140
gene id: 3702:AT3G59140
uniprot id: A0A5S9XMF1
uniprot id: Q9LYS2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
messages: Membrane
messages: Pump for glutathione S-conjugates.
messages: Ubiquitous.

3702:AT1G08190
gene id: 3702:AT1G08190
uniprot id: P93043
names: Function
names: Similarity
names: Subunit
messages: Belongs to the VPS41 family.
messages: Component of the homotypic fusion and vacuole protein sorting (HOPS) complex composed of the class C Vps core proteins VPS11, VCL1, VPS18 and VPS33, which in HOPS further associates with VPS39 and VPS41.
messages: Required for vacuolar assembly and vacuolar traffic.

3702:AT5G41970
gene id: 3702:AT5G41970
uniprot id: F4K000
names: Similarity
messages: Belongs to the MYG1 family.

3702:AT2G07718
gene id: 3702:AT2G07718
uniprot id: P93314
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07718) is demonstrated.
messages: Belongs to the cytochrome b family.
messages: Mitochondrion membrane

3702:AT2G04630
gene id: 3702:AT2G04630
uniprot id: A0A5S9WX44
uniprot id: Q9SJ96
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal Rpo6/eukaryotic RPB6 RNA polymerase subunit family.
messages: Component of the RNA polymerase II and V complexes.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerase V which mediates RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements.
messages: Nucleus

3702:AT3G25960
gene id: 3702:AT3G25960
uniprot id: A0A654FAY0
uniprot id: Q9LU95
names: Similarity
messages: Belongs to the pyruvate kinase family.

3702:AT1G49130
gene id: 3702:AT1G49130
uniprot id: F4I1N0
uniprot id: Q9M9B3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Nucleus

3702:AT2G37650
gene id: 3702:AT2G37650
uniprot id: A0A1P8AXT9
uniprot id: A0A654EZQ5
uniprot id: O80933
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GRAS family.
messages: Expressed in cotyledons, leaves and flowers, and in the elongation zone in root.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: Probable transcription factor involved in plant development.

3702:AT5G02910
gene id: 3702:AT5G02910
uniprot id: A0A384LM61
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G14780
gene id: 3702:AT4G14780
uniprot id: A0A178V0S2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G54840
gene id: 3702:AT3G54840
uniprot id: A0A178VAL4
uniprot id: Q9CB01
names: Caution
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by VPS9A.
messages: Although this sequence lacks the C-terminal cysteine motifs subject to isoprenylation in other Rab proteins, it does have N-terminal N-myristoylation and S-palmitoylation.
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Early endosome membrane
messages: Endoplasmic reticulum
messages: Endosomal protein probably involved in endocytosis. Probably not involved in vacuolar trafficking.
messages: Endosome membrane
messages: Interacts with VPS9A (PubMed:18055610). Interacts with TCTP1 (PubMed:20736351).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Widely expressed.

3702:AT3G45950
gene id: 3702:AT3G45950
uniprot id: A0A654FDB2
uniprot id: Q9LZT6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Associated with the spliceosome.
messages: Belongs to the SLU7 family.
messages: Involved in pre-mRNA splicing.
messages: Nucleus

3702:AT1G11650
gene id: 3702:AT1G11650
uniprot id: Q9SAB3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the polyadenylate-binding RBP45 family.
messages: Both isoform 1 and isoform 2 interact with poly(A)+ RNA in nucleus.
messages: By both biotic and abiotic stresses (e.g. ozone, oxidative chemicals and pathogens such as virulent and avirulent Pseudomonas syringae).
messages: Expressed in roots, leaves, stems, flowers, siliques, and seedlings. Present in immature anther tissues (tapetum cells) and mature pollen grains.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
messages: Nucleus

3702:AT1G20600
gene id: 3702:AT1G20600
uniprot id: Q9LM90
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G45180
gene id: 3702:AT5G45180
uniprot id: Q9FKE7
names: Similarity
messages: Belongs to the FMO family.

3702:AT3G10525
gene id: 3702:AT3G10525
uniprot id: A0A178V8H0
uniprot id: Q9LPP4
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, leaves, stems, siliques and flowers (PubMed:17098811). Expressed in the root elongation zone (PubMed:24399300).
messages: Increased number of smaller cells and loss of giant cells in sepals due to both a decrease in endoreduplication and an average decrease in the duration of the cell cycle.
messages: Interacts with CDKB1-1 (PubMed:20706207). Interacts with CPR5 (PubMed:25455564).
messages: Nucleus
messages: Over-expression of SMR1 produces additional giant cells on sepals.
messages: Probable cyclin-dependent protein kinase (CDK) inhibitor that functions as a repressor of mitosis in the endoreduplication cell cycle (PubMed:17098811, PubMed:26546445). Cooperates with SIM and SMR2 to promote endoreplication during leaf development (PubMed:26546445). Specifically regulates endoreduplication in epidermal pavement cells to produce the cell size pattern (PubMed:20485493). Is necessary for giant cell formation (PubMed:20485493). Positive regulator of effector-triggered immunity (ETI) (PubMed:25455564).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by double-stranded DNA breaks-inducing treatments (PubMed:17227549). Up-regulated by zeocin treatment (PubMed:21613568).

3702:AT5G55590
gene id: 3702:AT5G55590
uniprot id: Q9FM79
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the pectinesterase family.
messages: Expressed in anther tissues shortly after meiosis is completed and during the late developmental phases of siliques.
messages: Expressed in flower buds, siliques, developing guard cells, floral nectares, at the stigmatic surface, in the hypocotyl-root transition zone and the area of lateral root emergence. Not expressed in mature leaves.
messages: Pectinesterase required for cell type-specific pectin degradation to separate microspores.
messages: The mature pollen grains are arranged in a tetrad.
messages: cell wall

3702:AT5G36880
gene id: 3702:AT5G36880
uniprot id: A0A1P8BCV2
uniprot id: A0A5S9YAV2
uniprot id: B9DGD6
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the production of acetyl-CoA, an activated form of acetate that can be used for lipid synthesis or for energy generation. May play a limited role in the biosynthesis of lipids.
messages: Expressed in leaves, flower buds and young flowers.
messages: Glyoxysome
messages: In the forming silique, expressed in the funiculus and ovule from 1 to 3 day after flowering (DAF). At 3 DAF, expressed in the globular embryo, but expression decreases at 5 DAF and almost disappears at 7 DAF in the embryo. By 1 d after imbibition, expressed in the tip of seed radicle and then in the root tip up to 4 d after imbibition.
messages: chloroplast

3702:AT3G08040
gene id: 3702:AT3G08040
uniprot id: A0A2H1ZEH4
uniprot id: Q9SFB0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Cell membrane
messages: Chlorotic (PubMed:12172022, PubMed:8754685, PubMed:18826429, PubMed:21742986). Constitutive expression of strategy I iron deficiency response and accumulation of iron, manganese and zinc in shoots. No reduction in aluminum tolerance (PubMed:12172022, PubMed:18826429). Accumulation of Mn, Cu, Zn and Mg in leaves and accumulation of Fe in roots (PubMed:8754685). Altered pollen development (PubMed:21742986).
messages: Citrate transporter responsible for loading citrate into xylem tissues, which helps facilitate iron transport to shoots (PubMed:12172022, PubMed:15310833, PubMed:17351051, PubMed:18826429). Mediates the citrate release in the apoplastic spaces during plant development allowing iron nutrition between symplastically disconnected tissues (PubMed:21742986).
messages: Expressed during embryogenesis and during the early stages of germination.
messages: Expressed in roots in the pericycle and cells internal to the pericycle and surrounding the vascular tissue (PubMed:12172022, PubMed:15310833). Also expressed in seed and flower (PubMed:21742986).
messages: Membrane
messages: Two-fold induction by iron deficiency. Not induced by aluminum (PubMed:12172022, PubMed:18826429). Induced by abscisic acid (ABA) (PubMed:24111973).

3702:AT2G29760
gene id: 3702:AT2G29760
uniprot id: A0A5S9X2I9
uniprot id: O82380
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Involved in RNA editing event in chloroplasts. Required for the editing of a single site in rps12 transcript.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT3G29780
gene id: 3702:AT3G29780
uniprot id: Q9LH43
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT4G27500
gene id: 3702:AT4G27500
uniprot id: A0A384KB37
uniprot id: O23144
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the plant Proton pump-interactor protein family.
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: Interacts with AHA1 via N-terminal region.
messages: Promotes AHA1 plasma membrane ATPase activity by binding to a site different from the 14-3-3 binding site.
messages: Strongly expressed in root and shoot vascular systems, particularly in meristematic and sink tissues. Also present in pollen, stigmas and siliques, but not in developing embryos.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G18620
gene id: 3702:AT5G18620
uniprot id: A0A178UKL4
uniprot id: A0A7G2FBS6
uniprot id: F4JY24
uniprot id: F4JY25
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
messages: Highly expressed in growing tissues such as inflorescence and flower meristems, young leaves and floral organs. Expressed in roots, rosette and cauline leaves, stems, flowers, inflorescences and siliques.
messages: Interacts with RLT1 (PubMed:22694359). Binds to FGT1 (PubMed:27680998).
messages: No visible phenotype under normal growth conditions, but the double mutant plants chr11-1 and chr17-1 are very small and display early flowering and sterility (PubMed:22694359). Premature decline of expression of HSA32, HSP18.2, HSP21, HSP22 and HSP101 after HS in the double mutant plants chr11-1 and chr17-1 (PubMed:27680998).
messages: Nucleus
messages: Possesses intrinsic ATP-dependent nucleosome-remodeling activity. Constitutes the catalytic subunit of several complexes capable of forming ordered nucleosome arrays on chromatin (By similarity). Involved in the formation of nucleosome distribution patterns (PubMed:24606212). Required for the maintenance of the plant vegetative phase. In association with RLT1 or RLT2 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC (PubMed:22694359). Necessary to acquire heat stress (HS) memory (PubMed:27680998).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G27550
gene id: 3702:AT4G27550
uniprot id: A0A068FPW7
uniprot id: A0A178V0B7
uniprot id: A0A384KWW5
uniprot id: Q9T079
names: Caution
names: Similarity
messages: In the C-terminal section; belongs to the trehalose phosphatase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 20 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G21640
gene id: 3702:AT2G21640
uniprot id: A0A178VU05
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G14960
gene id: 3702:AT5G14960
uniprot id: A0A1P8BA83
uniprot id: Q9LFQ9
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Down-regulated posttranscroptionally by auxin.
messages: Expressed in a cell cycle-dependent manner. Not detected at the G1/S transition, but increases during the progression into S phase and peaks after the passage into G2.
messages: Increased root length and smaller cotyledons. Reduced root meristematic zone but longer cells in the differentiation zone.
messages: Inhibitor of E2F-dependent regulation of gene expression. Binds specifically the E2 recognition site as a monomer without interacting with DP proteins. May be up-regulating E2FA and down-regulating repressors of cell cycle progression. Promotes cell proliferation and represses cell elongation. Regulated by proteolysis via a ubiquitin-proteasome pathway.
messages: Monomer. No interactions with DPA or E2FA.
messages: Nucleus
messages: Preferentially expressed in proliferating tissues. Highly expressed in young stalk and young flowers. Lower expression in young leaves and mature flowers. Detected in cotyledonary vascular tissues, the shoot apical meristem, the base of trichomes, the fully developed stomata, the central root cylinder and in the columella of lateral roots but not in the primary root tips or in the leaf epidermal cells.
messages: The two DNA binding domains are required for binding to the E2 site.

3702:AT4G33465
gene id: 3702:AT4G33465
uniprot id: A0A178V1A4
uniprot id: A0A1P8B4S7
uniprot id: P82641
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Expressed at least in stem, root, rosette leaves and flower buds.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G38150
gene id: 3702:AT4G38150
uniprot id: Q9SZL5
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G62510
gene id: 3702:AT1G62510
uniprot id: Q9SXE6
names: Similarity
messages: Belongs to the plant LTP family. PEARLI1 subfamily.

3702:AT5G16660
gene id: 3702:AT5G16660
uniprot id: A0A178U7E8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79040
gene id: 3702:AT1G79040
uniprot id: A0A384LAE0
uniprot id: P27202
uniprot id: Q0WWI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associated with the oxygen-evolving complex of photosystem II.
messages: Belongs to the psbR family.
messages: chloroplast thylakoid membrane

3702:AT4G23740
gene id: 3702:AT4G23740
uniprot id: Q9SUQ3
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT1G01500
gene id: 3702:AT1G01500
uniprot id: A0A178WLZ0
uniprot id: Q8GUH2
names: Caution
names: Subcellular Location Annotation
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G25380
gene id: 3702:AT4G25380
uniprot id: A0A654FSL9
uniprot id: Q9STJ9
names: Function
messages: May be involved in environmental stress response.

3702:AT5G12370
gene id: 3702:AT5G12370
uniprot id: X5JA13
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SEC10 family.
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall.
messages: Expressed in seedlings, roots, leaves and flowers.
messages: No visible phenotype, due to the redundancy with SEC10b.
messages: The exocyst complex is composed of SEC3, SEC5, SEC6, SEC8, SEC10, EXO70A1 and EXO84B. Interacts with EXO84B. Binds to EXO70E2 (PubMed:24307681).
messages: This locus, comprising the single gene At5g12370 in the original reference genome assembly, contains in fact two paralogous genes in tandem, SEC10a (At5g12370) and SEC10b (At5g12365), and a sequence segment of 7 kb in length is missing from the reference genome sequence.
messages: cytosol
messages: extracellular exosome

3702:AT4G22100
gene id: 3702:AT4G22100
uniprot id: O65458
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT5G55540
gene id: 3702:AT5G55540
uniprot id: Q9FJ57
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in seedlings, roots, leaves, stems and flowers. Present in ovules, prominently in nucellus and integuments.
messages: Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization. Required for initial divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis.
messages: Membrane
messages: Severe dwarfism combined with twisted and malformed organs, and sterility. Loss of initial meristematic divisions in the epidermal/lateral root cap. Defection in basipetal transport of auxin (IAA) leading to several development aberrations.
messages: Strongly expressed in the shoot apical meristem (SAM) and the young leaf primordia. Also detected in the lamina of the cotyledons, especially in the mesophyll and vascular bundles.

3702:AT4G11090
gene id: 3702:AT4G11090
uniprot id: A0A178UVF6
uniprot id: A0A346P848
uniprot id: O82509
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G65205
gene id: 3702:AT5G65205
uniprot id: A0A654GFA1
uniprot id: Q944R2
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT1G23400
gene id: 3702:AT1G23400
uniprot id: Q9LDA9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Essential protein required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles.
messages: Interacts with CRS2 and RNA. Part of large ribonucleo-protein complexes that include group IIB introns, CRS2 and CAF2 (By similarity).
messages: Plants are albinos.
messages: chloroplast stroma

3702:AT2G26280
gene id: 3702:AT2G26280
uniprot id: O64843
names: Domain
names: Subunit
names: Tissue Specificity
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Expressed in cauline leaves, stems, rosette leaves, immature siliques and primary inflorescences.
messages: Interacts with MPC and PAB2.

3702:AT1G62380
gene id: 3702:AT1G62380
uniprot id: A0A654ELW2
uniprot id: Q41931
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit. Can also bind Cu(2+) ions.
messages: Enzyme involved in the ethylene biosynthesis. Required to mediate the 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated reversion of the ABA-induced inhibition of seed germination via endosperm rupture. May promote stem elongation by maximizing the extensibility cells, possibly by activating ethylene biosynthesis, in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0).
messages: Expressed in vegetative tissues. Constitutively expressed in leaves and blades. In ethylene exposed etiolated seedlings, localized in cells at the outer side of the exaggerated hook in an ethylene-dependent manner and following an ethylene sensitive pattern. Also detected in the root tip when treated by ethylene.
messages: Impaired in the 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated reversion of the ABA-induced inhibition of seed germination.
messages: Upon iron deprivation. Induced by ethylene, particularly in root tips and hooks of ethiolated seedlings. Promoted by ozone O(3). Accumulates in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0). Induced in roots by nitric oxide (NO).

3702:AT1G61580
gene id: 3702:AT1G61580
uniprot id: P22738
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uL3 family.
messages: Cytoplasm

3702:AT1G69640
gene id: 3702:AT1G69640
uniprot id: A0A178W418
uniprot id: Q8VYI1
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Endoplasmic reticulum membrane
messages: Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Can use C18- and C20-sphinganine as substrates to produce C18- and C20-phytosphinganines (D-ribo-2-amino-1,3,4-trihydroxyoctadecane and -eicosane).
messages: No visible phenotype; due to the redundancy with SBH2. Sbh1 and sbh2 double mutants are severely dwarfed, do not progress from vegetative to reproductive growth and have enhanced expression of programmed cell death associated-genes.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.
messages: Ubiquitous, with higher levels in flowers and roots.

3702:AT1G31860
gene id: 3702:AT1G31860
uniprot id: A0A5S9WKE5
uniprot id: O82768
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: In the C-terminal section; belongs to the PRA-PH family.
messages: In the N-terminal section; belongs to the PRA-CH family.
messages: Ubiquitously expressed throughout development.
messages: chloroplast

3702:AT2G16950
gene id: 3702:AT2G16950
uniprot id: A0A654EYI8
uniprot id: Q8H0U4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the importin beta family. Importin beta-2 subfamily.
messages: Cytoplasm
messages: Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus (By similarity). Involved in nuclear import of M9-containing proteins. In vitro, binds directly to the M9 region of the glycine-rich RNA-binding RBG7 and mediates its nuclear import.
messages: Interacts with RBG7, RBG8, RAN1 and RNP1.
messages: nucleoplasm

3702:AT2G01860
gene id: 3702:AT2G01860
uniprot id: Q5XET4
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G23410
gene id: 3702:AT2G23410
uniprot id: A0A654EVE6
uniprot id: O80458
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the UPP synthase family.
messages: Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.
messages: Endoplasmic reticulum membrane
messages: Expressed in low levels in the whole plant. Preferentially expressed in roots.

3702:AT2G33720
gene id: 3702:AT2G33720
uniprot id: O23659
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G10560
gene id: 3702:AT5G10560
uniprot id: Q9LXA8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 3 family.
messages: extracellular matrix

3702:AT5G54530
gene id: 3702:AT5G54530
uniprot id: A0A178UM95
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G26690
gene id: 3702:AT2G26690
uniprot id: A0A1P8AZ04
uniprot id: A0A1P8AZ62
uniprot id: Q9SZY4
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in shoots, leaves, flowers and siliques. Expressed in leaf petiole.
messages: Low-affinity proton-dependent nitrate transporter. Not involved in dipeptides transport.
messages: Membrane
messages: Up-regulated in the shoots by nitrate, but no changes in the roots.
messages: Wider leaves resulting from increased cell expansion. Lower nitrate content of the petiole and midrib.

3702:AT5G54490
gene id: 3702:AT5G54490
uniprot id: Q9LSQ6
names: Function
names: Induction
names: Subunit
messages: By auxin.
messages: Interacts with PID.
messages: Potential calcium sensor that binds calcium in vitro.

3702:AT5G11950
gene id: 3702:AT5G11950
uniprot id: A0A178UJ28
uniprot id: A0A1P8BGT5
uniprot id: Q84MC2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the LOG family.
messages: Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.
messages: Cytoplasm
messages: Expressed in roots and shoots. Detected in the root quiescent center and vasculature, in cotyledons, hypocotyls, stems, leaves, stomata, axillary buds, flowers and fruit abscission zones.
messages: No visible phenotype under normal growth conditions; due to the redundancy with other LOG proteins.
messages: Nucleus

3702:AT1G17500
gene id: 3702:AT1G17500
uniprot id: A0A178W5K3
uniprot id: Q9LNQ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
messages: Involved in transport of phospholipids.
messages: Membrane

3702:AT5G45950
gene id: 3702:AT5G45950
uniprot id: A0A654G8P8
uniprot id: Q9FJ41
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT1G43560
gene id: 3702:AT1G43560
uniprot id: Q8L7S9
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thioredoxin family. Plant Y-type subfamily.
messages: By light in leaves.
messages: Expressed in leaves.
messages: Expression decreases in developing seeds and increases during seed germination.
messages: Thiol-disulfide oxidoreductase that poorly activates chloroplastic malate dehydrogenase (NADP-MDH) and fructose-1,6-bisphosphatase. Provides reducing equivalents for peroxiredoxin Q.
messages: chloroplast stroma

3702:AT4G36790
gene id: 3702:AT4G36790
uniprot id: O23203
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Spinster (TC 2.A.1.49) family.
messages: Membrane

3702:AT1G62630
gene id: 3702:AT1G62630
uniprot id: Q9SI85
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT5G13030
gene id: 3702:AT5G13030
uniprot id: A0A178U9F5
uniprot id: Q8H126
names: Similarity
messages: Belongs to the SELO family.

3702:AT3G53130
gene id: 3702:AT3G53130
uniprot id: A0A654FFG7
uniprot id: Q6TBX7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Heme-containing cytochrome P450 involved in the biosynthesis of xanthophylls. Specific for epsilon- and beta-ring hydroxylation of alpha-carotene. Has only a low activity toward the beta-rings of beta-carotene. The preferred substrate in planta is not alpha-carotene but the epsilon-ring of zeinoxanthin (PubMed:12782726, PubMed:16890225, PubMed:19147649, PubMed:19939422). Possesses a major beta-carotene hydroxylase activity in planta when depleted in its preferred substrate alpha-carotene (PubMed:22513258).
messages: No visible phenotype, but lacks lutein and accumulates high levels of zeinoxanthin and beta-xanthophylls. Triple mutant cyp97c1, bch1 and bch2 is paler and smaller than wild-type.
messages: chloroplast

3702:AT2G33520
gene id: 3702:AT2G33520
uniprot id: O22802
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CYSTM1 family.
messages: Cell membrane
messages: Homodimer and heterodimers (PubMed:29272523). Interacts with CYSTM3, CYSTM4, CYSTM5, CYSTM6, CYSTM10, WIH1/CYSTM13 and CYSTM11 (PubMed:29272523). Binds weakly to CYSTM1, CYSTM2 and CYSTM12 (PubMed:29272523).
messages: Induced by salt, heat and drought.
messages: Involved in resistance to abiotic stress.
messages: Mostly expressed in siliques and, to a lower extent, in stems, roots, leaves and flowers.

3702:AT2G46740
gene id: 3702:AT2G46740
uniprot id: A0A178VXG4
uniprot id: O81030
names: Function
names: Similarity
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Catalyzes the oxidation of L-gulono-1,4-lactone to ascorbic acid (PubMed:20622436). L-gulono-1,4-lactone is oxidized to hydrogen peroxide and L-xylo-hexulonolactone which spontaneously isomerizes to L-ascorbate (By similarity).

3702:AT1G34270
gene id: 3702:AT1G34270
uniprot id: Q9XID1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT5G06210
gene id: 3702:AT5G06210
uniprot id: Q9FFZ6
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in rosette leaves, cauline leaves, stems and flowers.
messages: Induced by methyl viologen.
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit increased sensitivity to salt stress.
messages: Probable RNA-binding protein that may be involved in salt and oxidative stress tolerance.
messages: chloroplast

3702:AT1G70260
gene id: 3702:AT1G70260
uniprot id: A0A654EPE1
uniprot id: F4I5D5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT3G16480
gene id: 3702:AT3G16480
uniprot id: A0A654F7S8
uniprot id: O04308
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M16 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Does not seem to have a protease activity as it lacks one of the conserved zinc-binding sites.
messages: Heterodimer of alpha and beta subunits, forming the mitochondrial processing protease (MPP) in which subunit alpha is involved in substrate recognition and binding and subunit beta is the catalytic subunit (By similarity). Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341, PubMed:18305213). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493). Interacts with TIM23-2 (PubMed:22730406).
messages: Mitochondrion inner membrane
messages: Mitochondrion matrix
messages: Substrate recognition and binding subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins.
messages: chloroplast stroma

3702:AT5G43280
gene id: 3702:AT5G43280
uniprot id: A0A5S9YB50
uniprot id: Q9FHR8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Converts 3,5-dienoyl-CoAs to the corresponding 2,4-dienoyl-CoAs. Involved in degradation of unsaturated fatty acids.
messages: Expressed in roots, leaves, stems and flowers.
messages: Peroxisome

3702:AT3G23340
gene id: 3702:AT3G23340
uniprot id: A0A178VL59
uniprot id: Q9LW62
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CK1 Ser/Thr protein kinase family. Casein kinase I subfamily.
messages: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins.
messages: Cytoplasm
messages: Monomer.
messages: plasmodesma

3702:AT3G15360
gene id: 3702:AT3G15360
uniprot id: Q9SEU6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. Plant M-type subfamily.
messages: Thiol-disulfide oxidoreductase involved in the redox regulation of enzyme of the oxidative pentose phosphate pathway. Under reducing conditions, inhibits the glucose-6-phosphate dehydrogenase.
messages: chloroplast stroma

3702:AT4G17360
gene id: 3702:AT4G17360
uniprot id: F4JP46
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PurU family.
messages: Deformylase involved in photorespiration. Prevents excessive accumulation of 5-formyl tetrahydrofolate (THF), a potent inhibitor of the Gly decarboxylase/Ser hydroxymethyltransferase complex.
messages: Expressed in leaves, cotyledons, roots, seeds and flowers.
messages: Mitochondrion
messages: No visible phenotype. Puru1 and puru2 double mutant shows a 70-fold increase in Gly levels and accumulates elevated levels of 5- and 10-formyl THF. Embryo development arrests between heart and early bent cotyledon stages, and mature seeds are shriveled, accumulate low amounts of lipids, and fail to germinate. Puru1 and puru2 double mutant is only conditionally lethal and is rescued by growth under nonphotorespiratory conditions. Puru1, puru2 and fold1 triple mutant shows no photorespiratory phenotype.

3702:AT2G25450
gene id: 3702:AT2G25450
uniprot id: A0A654EX74
uniprot id: Q9SKK4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Polymorphism
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cv. Adb-0, cv. Ag-0, cv. Ang-0, cv. Bla-10, cv. Bs-1, cv. Bur-0, cv. Cal-0, cv. Cnt-1, cv. Columbia, cv. Di-1, cv. Edi-0, cv. Ei-2, cv. Ema-1, cv. Et-0, cv. Ge-0, cv. Lc-0, cv. Lo-2, cv. Mir-0, cv. Mrk-0, cv. Mt-0, cv. Pog-0, cv. Rd-0, cv. Rou-0, cv. Sf-1, cv. Tac-0, cv. Wei-0 and cv. Yo-0 contain a leaf- and seed-functional allele. Cv. Di-0, cv. Kas-1, cv. Lip-0, cv. Landsberg erecta, cv. Sha, cv. Sorbo, cv. Tsu-1 and cv. Wassilewskija contain a seed-only-functional allele. Cv. Cvi-0, cv. Hodja-Obi-Garm and cv. Kon contain a null allele. The null allele in cv. Cvi-0 is produced by 5 amino acid substitutions while the one in cv. Kon or cv. Hodja-Obi-Garm is produced by a substitution generating a stop codon at position 132.
messages: Expressed in leaves and seeds. All cultivars with seed-only-functional allele have low to non-detectable GSL-OH expression in the leaves.
messages: Necessary for the hydroxylation of but-3-enyl glucosinolate to 2-hydroxybut-3-enyl glucosinolate, which is toxic to insects, bacteria and nematodes, inhibits seed germination and produces bitter flavors.
messages: Plants exhibit a complete absence of 2-hydroxybut-3-enyl glucosinolate accumulation and a decreased resistance to generalist herbivory.

3702:AT5G14570
gene id: 3702:AT5G14570
uniprot id: A0A178UKX9
uniprot id: Q9LYK2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.
messages: Expressed in seeds, leaves and shoots. Lower expression in roots.
messages: Expressed mainly at the end of seed maturation when the tissue is completely dry.
messages: Involved in high-affinity nitrate transport. Controls nitrate content in seeds.
messages: Membrane
messages: No visible phenotype during vegetative growth. No effect on root nitrate influx. Decreased nitrate content in mature seeds and delayed germination.
messages: Not induced by nitrate or by growth on low nitrate concentration. Down-regulated by imbibition.
messages: Vacuole membrane

3702:AT5G08070
gene id: 3702:AT5G08070
uniprot id: Q9LEZ9
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed during ovule development (PubMed:25378179).
messages: Expressed in cotyledons, particularly in the vascular region, in leaves, roots, stems, buds, flowers and siliques.
messages: Interacts with SPL.
messages: Nucleus
messages: Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule develpment (PubMed:25378179).

3702:AT5G55320
gene id: 3702:AT5G55320
uniprot id: Q9FJ78
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the wax synthase family.
messages: Catalyzes the final step in the synthesis of long-chain linear esters (waxes).
messages: Membrane

3702:AT4G27060
gene id: 3702:AT4G27060
uniprot id: A0A178UY35
uniprot id: Q9T041
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, hypocotyls, stems, flowers, siliques, inflorescences, petioles, cotyledons, and leaves. Particularly present in root tips and shoot meristems.
messages: Interacts with WAV3.
messages: Plant-specific microtubule-associated protein (MAP) that regulates the orientation of cortical microtubules and the direction of organ growth (PubMed:18577573). Determines microtubule organization by modulating microtubule severing (PubMed:24055158).
messages: Right-handed twisting of petioles. Enhanced twisting when associated with SP2L disruption.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytoskeleton

3702:AT2G15050
gene id: 3702:AT2G15050
uniprot id: A0A178VZ65
uniprot id: A0A178W085
uniprot id: A0A178W0V8
uniprot id: Q9ZUK6
names: Caution
names: Function
names: Similarity
messages: Belongs to the plant LTP family.
messages: Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G16490
gene id: 3702:AT5G16490
uniprot id: Q9FFD5
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By the root-colonizing endophytic fungus P.indica.
messages: Cell membrane
messages: Expressed in roots, leaves, stems, flowers, siliques and pollen.
messages: Functions as downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Required for actin cortical microfilament assembly. Activated by ARAC4/ROP2 to promote the assembly of cortical actin microfilaments required for lobe formation and lateral expansion of pavement cells. Interaction with, and activation by ARAC4/ROP2 is inhibited by RIC1. Functions as downstream effector of ARAC11/ROP1 to promote the assembly of apical F-actin associated with vesicle accumulation in the tip of the growing pollen tube. Counteracts the ARAC11/ROP1-RIC3 pathway, which activates calcium signaling that leads to apical F-actin disassembly associated with exocytosis, to control actin dynamics and pollen tube apical growth. Downstream of ARAC11/ROP1, is involved in the growth responses to the root-colonizing endophytic fungus P.indica.
messages: Increased rate of seed germination.
messages: Interacts with ARAC4/ROP2 and ARAC11/ROP1.
messages: Over-expression of RIC4 in tobacco germinating pollen induces depolarized pollen tube growth.

3702:AT5G42030
gene id: 3702:AT5G42030
uniprot id: A0A1P8BAJ0
uniprot id: A0A1P8BAJ4
uniprot id: A0A1P8BAJ6
uniprot id: Q2HIS8
uniprot id: Q9FHY1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABI family.
messages: Binds SCAR.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity).
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: cytoskeleton

3702:AT5G63840
gene id: 3702:AT5G63840
uniprot id: A0A1P8BAU5
uniprot id: A0A654GDY8
uniprot id: Q9FN05
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 31 family.
messages: Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins (By similarity). Essential for stable accumulation of the receptor EFR that determines the specific perception of bacterial elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Required for sustained activation of EFR-mediated signaling, but not receptor FLS2-mediated signaling elicited by the bacterial flagellin flg22.
messages: Endoplasmic reticulum
messages: Expressed in roots, rosette leaves, leaf blades, mature stems, cauline leaves, flower buds, flowers and siliques.
messages: Heterodimer of a catalytic alpha subunit (PSL5) and a beta subunit (PSL4).
messages: No visible phenotype under normal growth conditions (permissive temperature of 21 degrees Celsius), but mutant plants have a temperature-sensitive phenotype (when transferred to 30 degrees Celsius) showing radially swollen roots and reduction in cellulose production.

3702:AT4G17620
gene id: 3702:AT4G17620
uniprot id: A0A384KY78
uniprot id: F4JP90
uniprot id: F4JP92
uniprot id: Q0WV80
uniprot id: Q8RY73
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DXO/Dom3Z family.
messages: Binds 2 magnesium ions.
messages: Cytoplasm
messages: Decapping enzyme for NAD-capped RNAs: specifically hydrolyzes the nicotinamide adenine dinucleotide (NAD) cap from a subset of RNAs by removing the entire NAD moiety from the 5'-end of an NAD-capped RNA (PubMed:30949699). The NAD-cap is present at the 5'-end of some RNAs and promotes mRNA decay (By similarity). Its precise role is unclear: may be involved in the connection between RNA turnover and retrograde chloroplast-to-nucleus signaling independently of its deNADding activity (PubMed:30949699).
messages: Decapping enzyme for NAD-capped RNAs: specifically hydrolyzes the nicotinamide adenine dinucleotide (NAD) cap from a subset of RNAs by removing the entire NAD moiety from the 5'-end of an NAD-capped RNA.
messages: Growth and pigmentation defects associated with global transcriptomic changes and accumulation of RNA quality control siRNAs.
messages: In contrast to other members of the family, shows reduced activity toward of m7G capped or incompletely capped RNAs, probably caused by the presence of an Asn residue in position 298 instead of a Gly (PubMed:30949699). The presence of an Asn-298 does not affect the decapping activity on NAD-cap RNAs (PubMed:30949699).
messages: Nucleus

3702:AT5G60640
gene id: 3702:AT5G60640
uniprot id: A0A178UQB2
uniprot id: F4K0F5
uniprot id: F4K0F7
uniprot id: Q9FF55
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds.
messages: Belongs to the protein disulfide isomerase family.
messages: Endoplasmic reticulum lumen
messages: Expressed in germinating seedling, including the cotyledons and hypocotyl, in vascular tissues, in pollen grains, root tips, leaf trichomes, developing seeds and siliques.
messages: Golgi apparatus
messages: Interacts with MEE8 and MED37A.
messages: No visible phenotype, probably due to functional redundancy.
messages: Nucleus
messages: Vacuole
messages: cell wall

3702:AT1G63490
gene id: 3702:AT1G63490
uniprot id: F4I240
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: At the seedling stage, present in the veins of cotyledons, hypocotyls, roots and germinated seedlings (PubMed:31038749). Later observed in leaves, primary and secondary roots, floral tissues, siliques and guard cells (PubMed:31038749).
messages: Belongs to the JARID1 histone demethylase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Expressed in inflorescences, roots, seedlings and siliques, and, at low levels, in leaves and stems.
messages: Functions as histone H3 'Lys-4' (H3K4me) demethylase involved in the regulation of gene expression (PubMed:31038749). Active on H3K4me1, H3K4me2 and H3K4me3 (PubMed:31038749). Repressor of the abscisic acid (ABA) signaling pathway, especially during stomatal closure regulation (PubMed:31038749). Negative regulator of responses to dehydration stress by binding directly to the chromatin of SRK2E/OST1 and demethylating H3K4me3 to regulates its expression (PubMed:31038749). Together with JMJ14 and JMJ16, required for plant growth and development (PubMed:31038749).
messages: Increased dehydration stress tolerance associated with abscisic acid (ABA) hypersensitivity during stomatal closure regulation (PubMed:31038749). Ectopic increase in genome-wide H3K4me1, H3K4me2 and H3K4me3 levels and activation of several dehydration stress-responsive genes, including OST1 (PubMed:31038749). The double mutants jmj17-1 jmj14-1 and jmj17-1 jmj16-1 have an early flowering phenotype (especially in long day conditions) (PubMed:31038749). The triple mutant jmj17-1 jmj14-1 jmj16-1 flowers even earlier (PubMed:31038749).
messages: Nucleus
messages: Slightly reduced in guard cells upon dehydration stress and abscisic acid (ABA) treatment.

3702:AT3G28853
gene id: 3702:AT3G28853
uniprot id: Q9LH88
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G26050
gene id: 3702:AT4G26050
uniprot id: Q8RWE5
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the SHOC2 family.
messages: Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction.
messages: Widely expressed except flowers.

3702:AT5G66280
gene id: 3702:AT5G66280
uniprot id: A0A178U7H7
uniprot id: Q9SNY3
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.
messages: Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.
messages: Expressed in roots,stipules and pollen just before anthesis. Primarily localized to the root meristem and columella root cap. Not expressed in emerging lateral roots.
messages: Homotetramer.

3702:AT2G29330
gene id: 3702:AT2G29330
uniprot id: A0A654EYC0
uniprot id: Q9ZW16
names: Function
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.
messages: Reductase active only on small flexible lipophilic carbonyls. No activity with cyclic monoterpenes, tropinone, nitrogen-containing tropinone analogs, tropine or pseudotropine as substrate.

3702:AT2G14740
gene id: 3702:AT2G14740
uniprot id: A0A178VT51
uniprot id: O80977
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the VSR (BP-80) family.
messages: Expressed in seeds, seedlings, roots, leaves, flowers and siliques.
messages: Golgi apparatus membrane
messages: Membrane
messages: Prevacuolar compartment membrane
messages: The tyrosine-based internalization signal may be involved in trafficking at the TGN.
messages: Vacuolar-sorting receptor (VSR) involved in clathrin-coated vesicles sorting from Golgi apparatus to vacuoles.
messages: clathrin-coated vesicle membrane

3702:AT3G60120
gene id: 3702:AT3G60120
uniprot id: A0A654FJD6
uniprot id: Q9M1D1
names: Similarity
messages: Belongs to the glycosyl hydrolase 1 family.

3702:AT1G22600
gene id: 3702:AT1G22600
uniprot id: A0A178W6I6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G48231
gene id: 3702:AT3G48231
uniprot id: P82763
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G61740
gene id: 3702:AT1G61740
uniprot id: A0A178W6K9
uniprot id: Q9SYB0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G31650
gene id: 3702:AT2G31650
uniprot id: Q9C5X4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated via O-glycosylation by SEC; this modification triggers FLC locus H3K4me3 histone modification, thus preventing premature flowering.
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
messages: Binds to the promoter and regulates the transcription of target genes, maintaining them in an active state; at promoters, required for TATA binding proteins (TBPs, e.g. TBP1 and TBP2) and RNA polymerase II (Pol II) recruitment, and, in a subsequent event, is recruited by a phosphorylated form of Pol II to the +300-bp region of transcribed sequences to trimethylates nucleosomes (PubMed:21266657, PubMed:23284292). Histone trimethyltransferase that trimethylates 'Lys-4' of histone H3 (H3K4me3); H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation and is required for efficient elongation of transcription but not for transcription initiation (PubMed:17965588, PubMed:17881378, PubMed:18375658, PubMed:23284292). Methylates only a limited fraction of nucleosomes of target genes (e.g. FLC, NAP, XTH33 and WRKY70) (PubMed:18375658). Necessary for WDR5A occupancy at WRKY70 and LTP7 genes (PubMed:23284292). Required to maintain the active state of class A (AP1 and AP2), class B (PI and AP3) and class C (AG, AGAMOUS) floral homeotic genes at early stages of flower development (PubMed:17881378). Together with CLF, modulates AG nucleosome methylation statement (PubMed:17881378). Involved in epigenetic regulation (e.g. H3K4me3) of the floral repressors FLC, FT and SOC1 to prevent the transition from vegetative to reproductive development, independently of the photoperiod; binds the active FLC locus before flowering, but this interaction is released upon the transition to flowering (PubMed:18375656, PubMed:24102415, PubMed:30150325). Regulates floral organ identity and flowering transition. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity. Exhibits histone methylase activity and subsequent transcriptional regulation on WRKY70 gene, and, to a lower extent on secondary defense-response targets salicylic acid (SA)-responsive gene PR1 and jasmon…
messages: Cytoplasm
messages: Decreased germination rates, larger stomatal apertures, more rapid transpiration and decreased tolerance to dehydration stress in atx1 plants partly due to reduced ABA biosynthesis as a result of decreased NCED3 transcript levels (PubMed:21309869). Reduced trimethylated 'Lys-4' histone H3 (H3K4me3) but normal dimethylated 'Lys-4' histone H3 (H3K4me2) at NAP, XTH33, NCED3, LTP and WRKY70 nucleosomes leading to decreased transcript levels in atx1 plants (PubMed:18375658, PubMed:21266657). Lower Pol II phosphorylation (e.g. Ser5P and Ser2P) and TBP (e.g. TBP1 and TBP2) occupancy at the promoters of NCED3, LTP and WRKY70 associated with reduced gene expression (PubMed:21266657). Strongly reduced occupancy of WDR5A at WRKY70 and LTP7 genes (PubMed:23284292). Accelerated transition from vegetative to reproductive development, under both long-day and short-day conditions, especially in medium-day conditions (12 hours light / 12 hours dark), due to FLC, FT and SOC1 epigenetic misregulation; specific depletion in H3K4me3 but increased H3K27me2 associated with reduced FLC, FT and SOC1 levels (PubMed:18375656, PubMed:21245040, PubMed:24102415). Misexpression of AGAMOUS, recognizable phenotypes (e.g. small and slightly serrated leaves, and early flowering time) and loss of H3K4me3 histone H3-tail marks (PubMed:17881378). Impaired in primary root growth with irregular shape and expanded quiescent center (QC) cells (PubMed:25205583). Ectopic expression of QC-specific markers (e.g. QC46, WOX5 and SCR) in the primary RAM and in the developing lateral root primordia (PubMed:25205583). Lack of coordination between cell division and cell growth leading to atypical distribution of T-divisions, the presence of oblique divisions, and abnormal cell patterning in the root apical meristem (RAM) (PubMed:25205583). Reduced lateral root (LR) density within the branching zone (PubMed:25205583). Altered transcription levels of target genes, including several endomembrane and cell wall-associated…
messages: Expressed in young seedlings (PubMed:21245040). Later in development, confined to cells at attachment sites of organ to stems (PubMed:21245040).
messages: Expression is associated with the initiation of flower organs and ovules (PubMed:12699618, PubMed:18375658). Accumulates in the tissues of young seedlings but also in adult plants (PubMed:18375658, PubMed:21245040). In flowers, present in sepals, in the vasculature of petals, and in the filaments of the stamens and, at low levels, at the tips of the stigma (PubMed:18375658). In seedlings, observed in the vasculature of the cotyledons, hypocotyls, stems, and the first pair of leaves (PubMed:18375656, PubMed:21245040). Just prior to flowering, a strong reduction in expression levels occurs in the vasculature (PubMed:18375656).
messages: Interacts with A4/EF1A in the cytoplasm on the nuclear periphery.
messages: Interacts with PIP5 (PubMed:16585509). Interacts with WDR5A (PubMed:19567704, PubMed:23284292). Binds to CLF in the nucleus (PubMed:17881378). Interacts with NRPB1 CTD domain, especially when NRPB1 is phosphorylated on 'Ser-5' of the heptapeptide repeat (PubMed:21266657). Component of a nuclear protein complex containing at least TATA binding proteins (TBPs, e.g. TBP1 and TBP2) and ATX1 (PubMed:21266657). Associates with ULT1 for trimethylating 'Lys-4' on histone H3 (H3K4me3) at flower MADS box gene loci (PubMed:23632855). Interacts with SEC (PubMed:30150325).
messages: Nucleus
messages: Precocious flowering, asymmetric rosettes, aberrant flowers and chlorosis (PubMed:21245040). Dramatically different pattern of reduced actin bundles and absent actin transvacuolar cytoplasmic strands (TVSs) (PubMed:21245040).
messages: Strongly expressed in cotyledons, but weak levels in the first true leaves, except at the hydothodes (PubMed:21245040). Ubiquitous with higher levels in dividing tissues, including inflorescence meristem and flower primordia (PubMed:11418242, PubMed:12699618, PubMed:18375658). Expressed also in leaves (especially at hydathodes), in growing inflorescence stems and in the mature flowers (PubMed:18375658).
messages: Strongly expressed in young seedlings.
messages: Trimethylates A4/EF1A post-translationally at Lys-396 (PubMed:21245040). Required for actin cytoskeleton organization (PubMed:21245040).
messages: perinuclear region

3702:AT3G11030
gene id: 3702:AT3G11030
uniprot id: A0A178VBD7
uniprot id: Q9SRL3
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Golgi apparatus membrane
messages: Probable xylan acetyltransferase that plays a role in xylan acetylation and normal deposition of secondary cell walls (PubMed:26745802). Required for 2-O-monoacetylation, 3-O-monoacetylation and 2,3-O-diacetylation of xylosyl residues in xylan (PubMed:26745802). Required for the formation of 3-O-acetylated, 2-O-glucoronic acid-substituted xylosyl residues (PubMed:26745802). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity).

3702:AT1G08860
gene id: 3702:AT1G08860
uniprot id: Q5XQC7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the copine family.
messages: Cell membrane
messages: Expressed at an extremely low level.
messages: Interacts with BAP1 and BAP2.
messages: Negative regulator of cell death and defense responses. Repress a number of R genes and may have effects in promoting growth and development. May function in membrane trafficking and in fusion of vesicles with plasma membrane (By similarity).
messages: No visible phenotype; due to partial redundancy with BON1 and BON2. Bon2 and bon3 double mutant has no visible phenotype. bon1 and bon3 double mutant is seedling-lethal when grown at 22 degrees Celsius. Bon1, bon2 and bon3 triple mutant is seedling-lethal at any temperature.

3702:AT3G59960
gene id: 3702:AT3G59960
uniprot id: A0A1I9LNM3
uniprot id: A0A2H1ZEL3
names: Similarity
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.

3702:AT1G65250
gene id: 3702:AT1G65250
uniprot id: O80795
names: Domain
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT3G53760
gene id: 3702:AT3G53760
uniprot id: A0A178V4Y7
uniprot id: A0A1I9LLT7
uniprot id: A0A1I9LLT8
uniprot id: Q9M350
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TUBGCP family.
messages: Gamma-tubulin complex is composed of gamma-tubulin and GCP proteins.
messages: Gamma-tubulin complex is essential for the control of microtubular network remodeling in the course of initiation and development of giant-feeding cells, and for the successful reproduction of nematodes (e.g. Meloidogyne spp.) in their plant hosts (By similarity).
messages: Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.
messages: Gamma-tubulin complex is necessary for microtubule nucleation at the microtubule organizing centers (MTOCs).
messages: Up-regulated in galls upon nematode infection.
messages: microtubule organizing center
messages: spindle

3702:AT3G53900
gene id: 3702:AT3G53900
uniprot id: A0A178VJX7
uniprot id: Q9M336
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Allosterically activated by GTP.
messages: Belongs to the UPRTase family.
messages: Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.
messages: Growth retardation, pale-green to albino phenotype and flimsy roots with less branching. Loss of uracil phosphoribosyltransferase activity.
messages: Slightly induced 12 days after germination.
messages: The N-terminal sequence (1-125) is sufficient to address heterologous proteins to chloroplasts.
messages: Up-regulated when pyrimidine catabolism is impaired.
messages: Uracil phosphoribosyltransferase (UPRT) that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate. Is probably the only functional UPRT, since the dual-domain proteins of the UKL family seem to lack this activity.
messages: chloroplast

3702:AT4G27680
gene id: 3702:AT4G27680
uniprot id: A0A178V5Z4
uniprot id: Q9T090
names: Similarity
messages: Belongs to the AAA ATPase family.

3702:AT3G21820
gene id: 3702:AT3G21820
uniprot id: Q5PP37
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
messages: Histone methyltransferase that methylates 'Lys-36' (H3K36me) of histone H3 to produce H3K36me3 (PubMed:29184030). Promotes early stages of cellular dedifferentiation through H3K36me3-dependent, and to a lesser degree H3K4me3-dependent, activation of Lateral organ Boundaries-Domain (LBD) (e.g. LBD16 and LBD29) genes (PubMed:29184030). Positive regulator of root organogenesis including lateral root formation as well as adventitious root formation from wounded leaf tissues (PubMed:29517958). Recruited by JMJ30/ARF (e.g. ARF7 and ARF19) complexes to promote the deposition of H3K36me3 and, to a lower extent, H3K4me3 at LBD genes promoters, thus ensuring their stable activation during callus formation on callus-inducing medium (CIM) (PubMed:29923261, PubMed:29184030).
messages: Interacts with JMJ30 (PubMed:29923261). Binds to ARF7 and ARF19 in the nucleus (PubMed:29184030).
messages: Nucleus
messages: Reduced callus formation from somatic cells associated with an impaired reduction of H3K9me3 deposition and lower accumulation of H3K36me3 at LBD16 and LBD29 loci during leaf-to-callus transition (PubMed:29923261, PubMed:29184030). Lower lateral root formation and impaired ability to form adventitious root formation from wounded leaf tissues (PubMed:29517958). The double mutant jmj30-2 atxr2-1 is strongly impaired in callus formation (PubMed:29923261).

3702:AT5G04120
gene id: 3702:AT5G04120
uniprot id: F4KI56
names: Caution
names: Function
names: Similarity
messages: Belongs to the phosphoglycerate mutase family.
messages: Phosphoglycerate mutase-like protein lacking PGM activity, but having a low metal-independent phosphoserine phosphatase activity in vitro. May be involved in serine biosynthesis.
messages: The full-length coding region has been amplified by RT-PCR and sequenced, but not submitted to the EMBL/GenBank/DDBJ databases.

3702:AT4G20840
gene id: 3702:AT4G20840
uniprot id: A0A178UZ42
uniprot id: Q9SVG3
names: Caution
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT5G37900
gene id: 3702:AT5G37900
uniprot id: Q9FKD6
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT1G51500
gene id: 3702:AT1G51500
uniprot id: A0A178W3S0
uniprot id: Q9C8K2
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Required for the polarization of reflected light on both adaxial and abaxial leaves surfaces upon viral infection by Turnip vein clearing virus (TVCV), probably by regulating cuticular wax compounds deposition, thus influencing visual attractiveness of infected plants for insect vectors.
messages: Abnormal cuticle and unusual lipidic cytoplasmatic inclusions in epidermal cells associated with a reduced secretion of aldehydes, alcohols and acids (PubMed:17951461, PubMed:26965486). The double mutant abcg11 abcg12 exhibits ABCG12-containing membrane inclusions protruded into the vacuole and contiguous with the endoplasmic reticulum (PubMed:20870961). Reduced polarizing on the adaxial and abaxial leaves surfaces, and impaired impact of viral infection by Turnip vein clearing virus (TVCV) on the polarization of reflected light leading to high light reflections; this phenotype is not visible upon viral infection by Cucumber mosaic virus (CMV) (PubMed:28346494).
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: By NaCl and abscisic acid (ABA).
messages: Cell membrane
messages: Endoplasmic reticulum
messages: Exclusively and constitutively expressed in epidermal cells.
messages: Forms heterodimers with ABCG11 in epidermal cells.
messages: Involved in the secretion of cuticular wax from epidermal cells to the cuticle, especially in the transport of aldehydes, alcohols and acids.
messages: Membrane

3702:AT3G19600
gene id: 3702:AT3G19600
uniprot id: F4JCB2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots, seedlings, hypocotyls, cotyledons, leaves, siliques and flowers.
messages: In the vegetative stage, first detected in the seed coat upon germination and in the hypocotyl of young seedlings. In seedlings, expressed in roots (mostly in primary roots), hypocotyl, rosette leaves and cotyledons. In rosette leaves, observed in the vascular tissue of major veins, guard cells and trichomes. During the reproductive stage, expressed in flower buds, stems, stamens, carpels and funiculi of siliques.
messages: Induced transiently by abscisic acid (ABA), salt (NaCl), cold and drought.
messages: Mediates the dephosphorylation of 'Ser-2' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1). This promotes the activity of RNA polymerase II. Regulates positively abscisic acid (ABA) and drought responses, including the regulation of specific genes expression.
messages: Nucleus
messages: Weak abscisic acid (ABA) hyposensitivity during the early stages of seedling development. Slighty decreased drought stress tolerance.

3702:AT1G69400
gene id: 3702:AT1G69400
uniprot id: F4I241
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat BUB3 family.
messages: Has a dual function in spindle-assembly checkpoint signaling and in promoting the establishment of correct kinetochore-microtubule (K-MT) attachments. Promotes the formation of stable end-on bipolar attachments. Necessary for kinetochore localization of BUB1. The BUB1/BUB3 complex plays a role in the inhibition of anaphase-promoting complex or cyclosome (APC/C) when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20 (By similarity).
messages: Nucleus
messages: Part of the mitotic checkpoint complex (MCC).
messages: kinetochore
messages: phragmoplast
messages: spindle

3702:AT2G40935
gene id: 3702:AT2G40935
uniprot id: A0A178VWJ5
uniprot id: Q8S8T8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in cadmium resistance.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G10030
gene id: 3702:AT3G10030
uniprot id: A0A384L583
uniprot id: A0A654F5N0
uniprot id: Q94JR1
uniprot id: Q9SR68
names: Similarity
messages: Belongs to the UMP kinase family.

3702:AT1G01340
gene id: 3702:AT1G01340
uniprot id: A0A178W8D7
uniprot id: Q9LNJ0
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclic nucleotide-gated cation channel (TC 1.A.1.5) family.
messages: Cell membrane
messages: Homotetramer or heterotetramer.
messages: May be due to an intron retention.
messages: Probable cyclic nucleotide-gated ion channel.
messages: The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

3702:AT1G80690
gene id: 3702:AT1G80690
uniprot id: A0A178W4J2
uniprot id: A0A7G2EAF0
uniprot id: Q8LA90
uniprot id: Q9SAI9
names: Similarity
messages: Belongs to the DeSI family.

3702:AT1G32400
gene id: 3702:AT1G32400
uniprot id: Q9C5W7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the tetraspanin (TM4SF) family.
messages: Expressed in rosette leaves.
messages: Homodimer. Constituent of tobamovirus replication complex. Interacts with TOM1.
messages: Necessary for the efficient intracellular multiplication of tobamoviruses, being a component of the replication complex.
messages: Reduced efficiency of intracellular multiplication of tobamoviruses (e.g. crucifer strain TMV-Cg), characterized by a reduced amplification of TMV-related RNAs.
messages: Vacuole membrane

3702:AT5G53100
gene id: 3702:AT5G53100
uniprot id: Q9FGM6
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3702:AT1G14280
gene id: 3702:AT1G14280
uniprot id: Q9M9T4
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts predominantly in the phot1 pathway. Involved in the leaf positioning and also in the phot2 pathway controlling the leaf flattening. Component of the network that modulates the very low-fluence response (VLFR) branch of phyA signaling. Regulates phytochrome-mediated photomorphogenesis and hypocotyl phototropism. May act by controlling auxin homeostasis.
messages: Belongs to the PKS family.
messages: Cell membrane
messages: Expressed in leaves, with the strongest expression on edges of the laminas. Not found in roots.
messages: Increased hypocotyl growth inhibition and cotyledon unfolding responses in the very low fluence response (VLFR) mode. Reduced phototropic response. Reduced hyponasty when grown under blue light. No effect on negative root phototropism. Auxin accumulation in protoplasts.
messages: Interacts with PKS1, RPT3, PHOT1 and PHOT2.
messages: PKS1, PKS2 and/or PKS4 are essential for phototropism but not for inhibition of gravitropism under long-term blue light irradiation.
messages: Up-regulated by white light.

3702:AT5G67340
gene id: 3702:AT5G67340
uniprot id: Q5XEZ8
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G48160
gene id: 3702:AT1G48160
uniprot id: A0A178WG48
uniprot id: Q943Z6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SRP19 family.
messages: Component of a signal recognition particle complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER) (By similarity). Binds directly to 7SL RNA (By similarity). Mediates binding of SRP54 to the SRP complex (By similarity).
messages: Cytoplasm
messages: nucleolus

3702:AT1G03120
gene id: 3702:AT1G03120
uniprot id: A0A1P8ATY1
uniprot id: A0A654E7E5
uniprot id: Q9SA57
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LEA type SMP family.
messages: Cytoplasm
messages: LEA proteins are late embryonic proteins abundant in higher plant seed embryos. The function of those proteins is not known.
messages: Nucleus

3702:AT2G48130
gene id: 3702:AT2G48130
uniprot id: A0A384LDL4
uniprot id: Q7EB72
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Expressed in seedlings, preferentially in the endodermis of hypocotyls and roots (PubMed:21558309, PubMed:23893219). Also observed in siliques (PubMed:23893219).
messages: In roots, restricted to the endodermis/pericycle above the middle of the differentiation zone and the regions where new lateral roots are emerging.
messages: Membrane
messages: Probable lipid transfer protein.

3702:AT5G11030
gene id: 3702:AT5G11030
uniprot id: Q84VX3
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Nucleus
messages: Required for the initiation of lateral roots independent from auxin signaling. May function in maintaining the pericycle in the mitotically competent state needed for lateral root formation.
messages: Widely expressed. Expressed throughout the root tip, stele and lateral primordia. Also expressed in the shoots.

3702:AT4G34830
gene id: 3702:AT4G34830
uniprot id: Q0WLC6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PPR family. P subfamily.
messages: Expressed in stems, leaves and sepals.
messages: No visible phenotype. RuBisCO content only slightly reduced.
messages: Regulator of the large subunit (LS) of RuBisCO. Involved either in the processing or in the stabilization of the processed transcript, probably by acting as a barrier to the 5'>3' degradation.
messages: chloroplast

3702:AT4G38570
gene id: 3702:AT4G38570
uniprot id: A0A178UUZ3
uniprot id: F4JTR2
uniprot id: Q8GUK6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Catalyzes the biosynthesis of phosphatidylinositol (PtdIns) as well as PtdIns:inositol exchange reaction. May thus act to reduce an excessive cellular PtdIns content. The exchange activity is due to the reverse reaction of PtdIns synthase and is dependent on CMP, which is tightly bound to the enzyme (By similarity).
messages: Membrane

3702:AT1G47720
gene id: 3702:AT1G47720
uniprot id: Q9SX99
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in root elongation zone and in gametophytic cells.
messages: Mitochondrion
messages: Regulates mitochondrial DNA recombination. Represses homologous recombination, preventing mitochondrial genome instability and unbalanced transmission of alternative mtDNA configurations. Binds preferentially single-stranded DNA. Does not bind to RNA.
messages: Severe leaf variegation, distortion and partial sterility.
messages: The PDF region is required for protein-DNA interaction while the SSB domain is not required for ssDNA binding.

3702:AT5G42590
gene id: 3702:AT5G42590
uniprot id: Q9FH66
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane
messages: Possesses triterpene oxidizing activity. Catalyzes the C23 hydroxylation of marneral to form 23-hydroxymarneral. Catalyzes the C23 hydroxylation of marnerol to form 23-hydroxymarnerol.

3702:AT1G33970
gene id: 3702:AT1G33970
uniprot id: F4HT21
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. IAN subfamily.
messages: Mainly expressed in leaves.
messages: Up-regulated by brassinolides. Down-regulated by 2-aminoethoxyvinylglycine (AVG), high CO(2), isoxaben, and propiconazole treatments.

3702:AT1G04620
gene id: 3702:AT1G04620
uniprot id: Q8GS60
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FrhB family.
messages: Constantly expressed throughout development.
messages: Interacts with SGR1, the chlorophyll catabolic enzymes (CCEs) NYC1, NOL and RCCR, and the LHCII complex. Part of a SGR1-CCE-LHCII complex, which acts in chlorophyll breakdown.
messages: No visible phenotype under normal growth conditions, but plants accumulate 7-hydroxymethyl chlorophyll a in green leaves.
messages: Probable iron-sulfur flavoprotein that converts 7-hydroxymethyl chlorophyll a to chlorophyll a using ferredoxin as a reducing equivalent. Catalyzes the reduction of a hydroxymethyl group to a methyl group. Belongs to the chlorophyll catabolic enzymes (CCEs).
messages: chloroplast

3702:AT1G12620
gene id: 3702:AT1G12620
uniprot id: Q9ASZ8
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G17770
gene id: 3702:AT2G17770
uniprot id: Q7PCC6
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bZIP family.
messages: Expressed on the flanks of the shoot apex.
messages: Nucleus
messages: Phosphorylated (Probable).
messages: Self-interacts (PubMed:16099979). Interacts with FT and FD/BZIP14 (PubMed:16099979, PubMed:16099980). Interacts with CPK33 (PubMed:25661797).
messages: Slightly delayed flowering. In the plants missing both FD and FDP, fd-2 fdp-1 strongly delayed flowering, even in the presence of high FT levels.
messages: Transcription factor required for the transition to flowering promoted by FT.

3702:AT3G46210
gene id: 3702:AT3G46210
uniprot id: Q9LX74
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNase PH family.
messages: Probable component of the RNA exosome complex.
messages: Probable component of the exosome 3'->5' exoribonuclease complex, a complex that degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3'-untranslated regions.
messages: nucleolus

3702:AT4G14770
gene id: 3702:AT4G14770
uniprot id: A0A1P8B4Y7
uniprot id: A0A1P8B4Z6
uniprot id: F4JIF5
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the lin-54 family.
messages: Expressed at the late stage of pollen development in tricellular and mature pollen.
messages: No visible phenotype.
messages: Nucleus
messages: Plays a role in development of both male and female reproductive tissues.
messages: The cysteine-rich domain CRC binds zinc in vitro.
messages: Ubiquitous but expressed mostly in all the aerial organs with highest expression in flowers.

3702:AT5G61420
gene id: 3702:AT5G61420
uniprot id: Q9SPG2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Can form complexes with MYC2, MYC3 or MYC4.
messages: Expressed in generative organs, mature leaves and trichomes.
messages: First present in stems, petioles and the main veins of true leaves in young seedlings. Later accumulates in leaves and present in lateral roots. During transition from the vegetative to the generative stage, preferentially expressed in inflorescence.
messages: Low levels of aliphatic glucosinolates and decreased repressing effect of brassinosteroid on glucosinolates.
messages: Major regulator of short-chained aliphatic glucosinolates (GLSs) biosynthesis. Together with MYB29/HAG3 and MYB76/HAG2, promotes aliphatic glucosinolate biosynthesis but represses indolic glucosinolate biosynthesis. Prevents insect performance (e.g. lepidopteran insect Mamestra brassicae and Spodoptera exigua) by promoting glucosinolates.
messages: Nucleus
messages: Slightly induced by glucose, gibberellic acid (GA), jasmonic acid (JA) and salicylic acid (SA). Transiently induced in inflorescence by mechanical stimuli such as touch or wounding, including herbivory-wounding. Up-regulated by sulfur-deficient stress.

3702:AT2G17430
gene id: 3702:AT2G17430
uniprot id: O22752
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MLO family.
messages: Cell membrane
messages: Endomembrane system
messages: Impaired pollen tube reception in the female gametophyte synergids; the pollen tube fails to arrest and continues to grow inside the female gametophyte.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity). Controls pollen tube reception in the female gametophyte synergids.
messages: Restricted to pollen, synergids, pistils and immature anthers. Also detected in seedlings, leaves, stems and inflorescens.
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT5G07270
gene id: 3702:AT5G07270
uniprot id: Q4FE45
names: Function
messages: Possesses E3 ubiquitin-protein ligase activity when associated with the E2 enzyme UBC8 in vitro.

3702:AT5G61020
gene id: 3702:AT5G61020
uniprot id: F4K1Z0
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aberrant trichome branching with an increase in number of spikes (PubMed:29643069). The double mutant plants ect2 and ect3 exhibit delayed timing of leaf formation and altered leaf morphology (PubMed:29643069).
messages: Cytoplasm
messages: Expressed in the shoot apex, at the sites of leaf formation, and in emerging leaves.
messages: Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability (Probable). M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (Probable). Required for the correct timing of leaf formation and normal leaf morphology (PubMed:29643069). Required for proper trichome branching and morphology (PubMed:29643069). Functions redundantly with ECT2 (PubMed:29643069).

3702:AT1G53320
gene id: 3702:AT1G53320
uniprot id: A0A178WNG9
uniprot id: Q93VI8
names: Similarity
names: Tissue Specificity
messages: Belongs to the TUB family.
messages: Ubiquitous.

3702:AT5G01640
gene id: 3702:AT5G01640
uniprot id: A0A178UH31
uniprot id: Q9M012
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PRA1 family.
messages: Endosome membrane
messages: Expressed in roots, lateral roots, lateral root caps, columella cells, leaves, and shoot apex.
messages: Interacts with PRA1B1, PRA1B2, PRA1B3, PRA1B4, PRA1B6 and PRA1E.
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane

3702:AT3G13830
gene id: 3702:AT3G13830
uniprot id: A0A178VM81
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79030
gene id: 3702:AT1G79030
uniprot id: A0A384K9K9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G43890
gene id: 3702:AT2G43890
uniprot id: A0A178VQI1
uniprot id: O80559
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT2G31680
gene id: 3702:AT2G31680
uniprot id: Q9SIP0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT1G48300
gene id: 3702:AT1G48300
uniprot id: Q9C5W0
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the diacylglycerol acyltransferase family.
messages: Expressed in germinating seeds 48 hours after exposure to the light, just after the emergence of the radicle.
messages: Involved in triacylglycerol (TAG) biosynthesis (PubMed:22760209, PubMed:30467384). Catalyzes the acylation of the sn-3 hydroxy group of sn-1,2-diacylglycerol using acyl-CoA (PubMed:22760209, PubMed:30467384). May preferentially use linolenoyl-CoA as substrate and to a lesser extent linoleoyl-CoA (PubMed:22760209). May contribute to the active recycling of linoleate and linolenate into TAG when seed oil breakdown is blocked (PubMed:22760209).
messages: No visible phenotype under normal growth conditions.
messages: The subcellular localization of a truncated sequence of DGAT3, lacking AA 1-75, has been shown to be cytosolic (PubMed:22760209). However, the N-terminus of the full-length protein is predicted to contain a transit peptide for chloroplast targeting. Therefore, the localization of DGAT3 is unsure.

3702:AT4G12280
gene id: 3702:AT4G12280
uniprot id: Q9STI3
names: Cofactor
names: PTM
names: Similarity
messages: Belongs to the copper/topaquinone oxidase family.
messages: Contains 1 topaquinone per subunit.
messages: Topaquinone (TPQ) is generated by copper-dependent autoxidation of a specific tyrosyl residue.

3702:AT2G45810
gene id: 3702:AT2G45810
uniprot id: A0A654F2A0
uniprot id: Q94BV4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping.
messages: Belongs to the DEAD box helicase family.
messages: Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily.
messages: P-body
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT4G03550
gene id: 3702:AT4G03550
uniprot id: Q9ZT82
uniprot id: W8PV73
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 48 family.
messages: By salicylic acid (SA).
messages: Cell membrane
messages: Highly expressed in flowers. Expressed at low levels in roots, leaves, stems, cauline leaves and siliques.
messages: Involved in sporophytic and gametophytic development. Required for normal leaf development. During pollen formation, required for the formation of the callose wall separating the tetraspores of the tetrad (interstitial wall), but not for the callose wall surrounding the pollen mother cells (peripheral wall). Functionally redudant to CALS11 (GSL1). May play a role later in pollen grain maturation. Required for callose formation induced by wounding and pathogen attack. May interfere with salicylic acid-induced signaling pathway during defense response. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals.
messages: Membrane
messages: Plants develop smaller leaves, and collapsed and inviable pollen grains. They are resistant to the biotrophic pathogens Erysiphe cichoracearum (powdery mildew), E.orontii and Hyaloperonospora parasitica.

3702:AT5G38110
gene id: 3702:AT5G38110
uniprot id: A0A178UQ02
uniprot id: Q9LS09
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ASF1 family.
messages: Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
messages: Interacts with histone H3 and histone H4 (By similarity). Interacts strongly with the N-terminus of TOUSLED.
messages: Nucleus
messages: Phosphorylated in vitro by TOUSLED.

3702:AT3G54280
gene id: 3702:AT3G54280
uniprot id: B5BT18
uniprot id: F4JCU6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the helicase family.
messages: Impaired in root growth and true leaf development.
messages: Involved in meristem development. Acts as positive regulator of the CUC-STM pathway in shoot apical meristem (SAM) neo-formation.
messages: Nucleus

3702:AT5G17580
gene id: 3702:AT5G17580
uniprot id: A0A1P8BAC1
uniprot id: Q9LF66
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT1G08700
gene id: 3702:AT1G08700
uniprot id: A0A384LEN8
uniprot id: O64668
uniprot id: Q0V7S4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase A22A family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Homodimer.
messages: Homodimer. Probable component of the gamma-secretase complex, a complex composed of a presenilin homodimer, nicastrin, APH1 and PEN2 (By similarity).
messages: Membrane
messages: Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
messages: The PAL motif is required for normal active site conformation.

3702:AT3G25050
gene id: 3702:AT3G25050
uniprot id: A0A5S9XH05
uniprot id: Q9LJR7
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 1 subfamily.
messages: By auxin and brassinolide.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Predominantly expressed in flower buds.
messages: apoplast
messages: cell wall

3702:AT5G13190
gene id: 3702:AT5G13190
uniprot id: A0A178UGF9
uniprot id: Q94CD4
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a membrane anchor, bringing other regulators of programmed cell death (PCD) to the plasma membrane. Negatively regulates hypersensitive cell death.
messages: Belongs to the CDIP1/LITAF family.
messages: Both N-terminal (1-47) and C-terminal (114-134) domains are sufficient for the interaction with MIEL1 or with the N-terminal domain of LSD1.
messages: Cell membrane
messages: Interacts (via N- and C-terminal) with MIEL1 and LSD1 (via N-terminus).
messages: The LITAF domain (48-113) is not involved in the interaction with LSD1.
messages: The LITAF domain is stabilized by a bound zinc ion (By similarity). The LITAF amphipathic helix region (68-90) is necessary for plasma membrane localization.
messages: Up-regulated by Pseudomonas syringae avrRpt2 and fumonisin B1 (FB1).

3702:AT1G64900
gene id: 3702:AT1G64900
uniprot id: A0A5S9WS02
uniprot id: Q42602
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Membrane

3702:AT4G35550
gene id: 3702:AT4G35550
uniprot id: A0A178UZQ1
uniprot id: O81788
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the WUS homeobox family.
messages: Early flowering (PubMed:18950478). Altered fruit development (PubMed:22946675). Siliques with narrow replum (PubMed:22946675). Reduced number of lateral roots (PubMed:22946675).
messages: Expressed in lateral roots, cotyledon and root vasculatures, pericycle, stem cells of the primary root meristem, leaf primordia, flower vasculature, stigma and gynoecium (PubMed:18950478, PubMed:22946675). Expressed in developing carpels, floral buds and inflorescences (PubMed:22946675).
messages: Induced by wounding.
messages: Nucleus
messages: Transcription factor involved in the regulation of fruit patterning (PubMed:22946675). Promotes replum development by down-regulating JAG and YAB1/FIL genes activity in medial tissues (PubMed:22946675). Seems to inhibit fruit dehiscence, maybe by controlling valve margin lignification (PubMed:22946675). Promotes callus formation at wound sites (PubMed:34730809). Is required for the formation of highly vacuolated large cells in callus and for the establishment of organ reconnection (PubMed:34730809). Targets directly genes involved in stress-induced cellular reprogramming, and cell wall modifier genes (PubMed:34730809).

3702:AT5G47230
gene id: 3702:AT5G47230
uniprot id: A0A178UKK9
uniprot id: O80341
names: Caution
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2). Wounding as well as cold stress induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by jasmonate, Alternaria brassicicola, exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress.
messages: Nucleus
messages: The AP2/ERF domain binds specifically to the 5'-GCCGCC-3' motif. The affinity of this binding is higher if the seventh amino-acid of this domain is basic (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G55350
gene id: 3702:AT1G55350
uniprot id: A0A5S9WQ51
uniprot id: F4I0A4
uniprot id: Q8RVL2
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Although homology to other calpains is high within the protease domain, the lack of calcium-binding sites suggests that this protein is a protease that may not be activated by calcium ions.
messages: Autocatalytic proteolytic cleavage leading to the production of mainly cytoplasmic localized subproducts of about 85 and 120 kDa.
messages: Belongs to the peptidase C2 family.
messages: Cell membrane
messages: Cytoplasm
messages: Defective embryo arrested at preglobular/globular stage. Disturbed endosperm lacking the aleurone-like peripheral cell layer and unorganized embryo development displaying irregular mitotic divisions in the embryo proper and suspensor. In a partially disrupted phenotype, impaired meristems organization characterized by vacuolated cells, abnormal cotyledon epiderm made of chloroplast-containing cells, and radialized leaves. Decreased numbers of giant cells in sepal epidermis of dek1-4 (PubMed:25315606).
messages: Endoplasmic reticulum membrane
messages: Endosome membrane
messages: Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active. Required for the formation of giant cells in sepals by determining cell fate and promoting endoreplication (PubMed:25315606).
messages: Mostly expressed in meristems and organ primordia. Expressed at low levels in young and germinating seeds at 10 ppm and in seedling roots at 67 ppm. Present in most tissues at a low level.
messages: Mostly observed in vegetative, inflorescence and floral meristems as well as in young leaf and floral organ primordia. Strongly expressed in developing ovules and during early embryogenesis. Expressed evenly throughout the endosperm and the embryo in developing seed. Present in the embryo proper, but excluded from the suspensor, until the late heart stage, and fades out later, especially in the hypocotyl region, to be present at low levels throughout walking-stick embryos. Accumulates at the margins and in the tips of cotyledons and lateral organs, in the apical meristem, in a subset of cells at the root pole and in a restricted number of cells within the presumptive vasculature of the hypocotyls. Also detected during early endosperm development, prior to cellularization.
messages: The transmembrane regions are not required for calpain activity but may play regulatory roles.

3702:AT3G46680
gene id: 3702:AT3G46680
uniprot id: Q9SNB0
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G54030
gene id: 3702:AT1G54030
uniprot id: A0A1P8AW84
uniprot id: Q7XA74
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Defects in endoplasmic reticulum (ER) protein export and organizational defects in the ER, including aggregation of ER around the nucleus. Increased sensitivity to salt.
messages: Endoplasmic reticulum
messages: Expressed during all developmental stages, with the highest accumulation in germinated seeds.
messages: Expressed throughout the seedling, rosette leaves, roots, inflorescence and imbibed seed, but not in pollen.
messages: Interacts with the PYK10 complex and TGG2, but not with TGG1 or PEN2.
messages: Involved in organization of the endomembrane system and is required for endoplasmic reticulum morphology and organelle distribution. May act by inhibiting the formation of PYK10 complex by binding to GLL23 and exporting it from the ER. Required for proper subcellular localization of myrosinase TGG2. Has no lipase or esterase activity.
messages: Lacks the conserved active site 'GDSL' motif and has no lipase activity.
messages: The stop codon at position 16 is created by sequencing errors.
messages: Up-regulated by methyl jasmonate and upon pathogen infection.
messages: Vacuole

3702:AT1G78460
gene id: 3702:AT1G78460
uniprot id: A0A178WHL1
uniprot id: Q9SYN5
names: Similarity
messages: Belongs to the HEBP family.

3702:AT5G67250
gene id: 3702:AT5G67250
uniprot id: Q9FE83
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Nucleus
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex (By similarity). Interacts with SKP1A/ASK1, SKP1B/ASK2 and ASK11.
messages: The F-box is necessary for the interaction with ASK proteins.

3702:AT5G47200
gene id: 3702:AT5G47200
uniprot id: Q9FPJ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Golgi apparatus membrane
messages: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER) (By similarity).
messages: trans-Golgi network membrane

3702:AT1G74260
gene id: 3702:AT1G74260
uniprot id: Q9M8D3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Essential to the male gametophyte development. Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
messages: In the N-terminal section; belongs to the FGAMS family.
messages: Lethal to the male gametophyte.
messages: Mitochondrion
messages: chloroplast

3702:AT3G58490
gene id: 3702:AT3G58490
uniprot id: A0A178VD76
uniprot id: Q9M2G7
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type 2 lipid phosphate phosphatase family.
messages: Endoplasmic reticulum membrane
messages: Functions as sphingoid long-chain base phosphate (LCBP) phosphatase. May play a role in the regulation of LCBP levels and be involved in stomatal responses through LCBP-mediated ABA signaling.
messages: No visible phenotype under normal growth conditions, but mutant plants show increased sensitivity to ABA in stomatal closure and decreased sensitivity to ABA-induced inhibition of primary root growth.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G01510
gene id: 3702:AT3G01510
uniprot id: F4J117
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Slight reduction in rosette size and fresh weight and increased starch content in leaves.
messages: Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. Participates in the regulation of the initial steps of starch degradation at the granule surface. May release a different set of phosphate groups from those removed by DSP4.
messages: chloroplast

3702:AT5G01690
gene id: 3702:AT5G01690
uniprot id: Q9M007
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane
messages: Specifically expressed in pollen.

3702:AT5G63570
gene id: 3702:AT5G63570
uniprot id: A0A1P8BGJ8
uniprot id: A0A654GDN2
uniprot id: P42799
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
messages: By light. In etiolated seedlings, initial expression is reduced but after further illumination, levels steadily increase.
messages: Can use both pyridoxamine 5'-phosphate (PMP) and pyridoxal 5'-phosphate (PLP) as cofactors.
messages: Homodimer.
messages: Present in all tissues tested.
messages: Suppresses partially the ENF1 disruption pleiotropic developmental phenotypes.
messages: Transaminase converting glutamate 1-semialdehyde (GSA) to 5-aminolevulinate (ALA). Involved in the biosynthesis of tetrapyrroles.
messages: chloroplast

3702:AT2G24680
gene id: 3702:AT2G24680
uniprot id: P0CAP4
names: Sequence Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: Sequencing errors.

3702:AT1G60490
gene id: 3702:AT1G60490
uniprot id: A0A654EJR0
uniprot id: P42339
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subunit
messages: Belongs to the PI3/PI4-kinase family.
messages: Homozygous mutants are lethal (PubMed:25628629). In hemizygous mutants, increased expression of ProDH1 (PubMed:25628629). Reduced proline accumulation in response to salt (NaCl) (PubMed:25628629).
messages: Induced by salicylic acid (SA) and upon infection by the incompatible bacterial pathogen Pseudomonas syringae pv tomato DC3000 (avrRpt2).
messages: Interacts with VPS15 (PubMed:22361507). Component of a complex made of VPS38/USL1 and PI3K main subunits such as VPS15, ATG6/VPS30 and VPS34 (PubMed:29897620). Binds directly to VPS38/USL1 (PubMed:29184027).
messages: Involved in the negative regulation of proline, hydrophobic and aromatic amino acids accumulation, especially in response to salt (NaCl), either through inhibition of their synthesis and/or promotion of their catabolism (PubMed:25628629). Triggers defense responses (e.g. pathogenesis related (PR1 and PR5) gene expression and hydrogen peroxide H(2)O(2) burst) to the bacterial pathogen compatible Pseudomonas syringae pv tomato DC3000 (Pst DC3000) and incompatible Pst DC3000 (avrRpt2), by regulating reactive ogygen species (ROS) production and by promoting stomatal closure (PubMed:32117334).
messages: The PI3K inhibitor LY294002 affects phosphatidylinositol 3-phosphate (PI3P) levels and triggers a decrease in proline, hydrophobic and aromatic amino acids, and sugars (e.g. raffinose) accumulation in response to salt treatment correlated with lower P5CS1 expression and higher ProDH1 expression, genes involved in proline biosynthesis and catabolism, respectively.

3702:AT1G48800
gene id: 3702:AT1G48800
uniprot id: Q9C748
names: Cofactor
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: Cytoplasm
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT1G12760
gene id: 3702:AT1G12760
uniprot id: Q9LN71
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Mediates E2-dependent protein ubiquitination in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT2G35130
gene id: 3702:AT2G35130
uniprot id: O82178
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G20650
gene id: 3702:AT2G20650
uniprot id: Q500V2
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase that may be involved in xylem development.
messages: Endomembrane system
messages: Highly expressed in stems. Expressed in root xylem and seed coat.
messages: No visible phenotype under normal growth conditions.
messages: The RING-type zinc finger domain is required for E3 ligase activity.

3702:AT1G54510
gene id: 3702:AT1G54510
uniprot id: Q9SLI2
names: Function
names: Sequence Caution
names: Similarity
messages: Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
messages: May be involved in plant development processes.
messages: Sequencing errors.

3702:AT2G31260
gene id: 3702:AT2G31260
uniprot id: A0A178W047
uniprot id: Q8RUS5
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG9 family.
messages: Expressed in roots, leaves, stems and flowers.
messages: Forms a homotrimer with a solvated central pore, which is connected laterally to the cytosol through the cavity within each protomer. Acts as a lipid scramblase that uses its central pore to function: the central pore opens laterally to accommodate lipid headgroups, thereby enabling lipid flipping and redistribution of lipids added to the outer leaflet of ATG9-containing vesicles, thereby enabling growth into autophagosomes.
messages: Homotrimer; forms a homotrimer with a central pore that forms a path between the two membrane leaflets.
messages: Low resolution structures by electron microscopy suggested the presence of six transmembrane regions (PubMed:31276439). However, high resolution structures in human and S.pombe showed that it is composed of four transmembrane and two intramembrane regions (By similarity).
messages: Membrane
messages: Mutant plants are hypersensitive to nitrogen or carbon starvation and show early bolting senescence.
messages: Phospholipid scramblase involved in autophagy by mediating autophagosomal membrane expansion (PubMed:12114572, PubMed:24805779). Cycles between the preautophagosomal structure/phagophore assembly site (PAS) and the cytoplasmic vesicle pool and supplies membrane for the growing autophagosome. Lipid scramblase activity plays a key role in preautophagosomal structure/phagophore assembly by distributing the phospholipids that arrive through ATG2 from the cytoplasmic to the luminal leaflet of the bilayer, thereby driving autophagosomal membrane expansion (By similarity). In addition to autophagy, also plays a role in necrotic cell death (By similarity). Plays an essential role in plant nutrient recycling (PubMed:12114572).
messages: Phospholipid scramblase involved in autophagy. Cycles between the preautophagosomal structure/phagophore assembly site (PAS) and the cytoplasmic vesicle pool and supplies membrane for the growing autophagosome. Lipid scramblase activity plays a key role in preautophagosomal structure/phagophore assembly by distributing the phospholipids that arrive through ATG2 from the cytoplasmic to the luminal leaflet of the bilayer, thereby driving autophagosomal membrane expansion.
messages: Preautophagosomal structure membrane

3702:AT5G01220
gene id: 3702:AT5G01220
uniprot id: Q8S4F6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
messages: By phosphate depletion (PubMed:11960029). Repressed by phosphate (Pi) and phosphite (Phi), with a faster suppression in roots than in shoots (PubMed:25697796).
messages: Catalyzes the transfer of the sulfoquinovose moiety from UDP-sulfoquinovose to diacylglycerol during sulfolipid biosynthesis (PubMed:11960029). Sulfolipid contributes to maintaining a negatively charged lipid-water interface, a requirement for proper function of photosynthetic membranes (PubMed:11960029). Sulfolipid may also function as a substitute of anionic phospholipids under phosphate-limited growth conditions (PubMed:11960029).
messages: Lack of sulfolipid leading to reduced growth under phosphate-limited growth conditions.
messages: chloroplast membrane

3702:AT1G09480
gene id: 3702:AT1G09480
uniprot id: A0A384L5M3
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G24540
gene id: 3702:AT4G24540
uniprot id: A0A178UV29
uniprot id: O82794
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Delayed flowering.
messages: During vegetative phase, expressed in the entire shoot apical meristem and in emerging leaf primordia. During floral transition, gradually detectable in the transitional shoot apex and young cauline leaves. Detected in the inflorescence meristem. Present throughout the tunica (superficial layers) of the floral meristem during early stages of flower development. Later disappears prior to emergence of sepal primordia. At later stages of floral development, weakly expressed in the distal parts of stamens and carpels. Then restricted to pollen and the adaxial surface of the gynoecium.
messages: Induced by vernalization in a FLC-independent manner. Repressed by the floral homeotic genes AP1, LFY and SEP3 in emerging floral meristems to establish a floral identity and prevent inflorescence fate. Up-regulated at the shoot apex by SOC1.
messages: Interacts with IMK3/MRLK. Forms a homodimer and heterodimer with SOC1, AP1 and SVP through MADS-box domain. Interacts with the SEU-LUG corepressor complex when complexed to AP1. Interacts with AGL15 and AGL16.
messages: Mostly expressed in shoot apical meristems, including floral meristems. Also detected in stems, seedlings, leaves, flowers and siliques, and, to a lower extent, in roots.
messages: Nucleus
messages: Phosphorylated by IMK3. Induced by vernalization.
messages: Transcription activator that mediates floral transition in response to vernalization. Promotes inflorescence fate in apical meristems. Acts in a dosage-dependent manner. Probably involved in the transduction of RLK-mediated signaling (e.g. IMK3 pathway). Together with AP1 and SVP, controls the identity of the floral meristem and regulates expression of class B, C and E genes. When associated with SOC1, mediates effect of gibberellins on flowering under short-day conditions, and regulates the expression of LEAFY (LFY), which links floral induction and floral development. Confers inflorescence characteristics to floral primordia and early flowering.

3702:AT1G24120
gene id: 3702:AT1G24120
uniprot id: Q8VXV4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DnaJ family. B/II subfamily.
messages: Expressed constitutively in seedlings, roots, leaves, stems, flowers and siliques.
messages: Membrane
messages: Plays a continuous role in plant development probably in the structural organization of compartments (By similarity). Seems to not be involved in gravitropism signaling pathway.

3702:AT3G08840
gene id: 3702:AT3G08840
uniprot id: A0A384KXJ0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G35190
gene id: 3702:AT1G35190
uniprot id: A0A654EG28
uniprot id: F4HYA5
uniprot id: Q9C6F0
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT3G20180
gene id: 3702:AT3G20180
uniprot id: F4JDJ0
names: Caution
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Contains an apparent HMA-like domain but lacks the core conserved Cys-X-X-Cys motif.
messages: Heavy-metal-binding protein.

3702:AT5G09290
gene id: 3702:AT5G09290
uniprot id: A0A384L5T2
uniprot id: Q0WTK9
uniprot id: Q84VY5
names: Function
names: Similarity
messages: Belongs to the inositol monophosphatase superfamily.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP.
messages: Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP. Is also able to hydrolyze inositol 1,4-bisphosphate.

3702:AT5G05260
gene id: 3702:AT5G05260
uniprot id: A0A178UPZ7
uniprot id: Q9FLC8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: Converts L-phenylalanine into phenylacetaldoxime, the precursor of benzylglucosinolate (glucotropeolin).
messages: Endoplasmic reticulum membrane

3702:AT1G52380
gene id: 3702:AT1G52380
uniprot id: Q9C829
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Contains FG repeats mediating the translocation through the NPC by interacting with transport factors.
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins.
messages: Probably involved in nucleocytoplasmic transport via its interactions with importins and Ran, rather than by forming part of the nuclear pore complex (NPC) scaffolding.
messages: nuclear pore complex
messages: nucleoplasm

3702:AT2G45300
gene id: 3702:AT2G45300
uniprot id: A0A1P8B1E5
uniprot id: A0A5S9X766
uniprot id: P05466
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EPSP synthase family.
messages: Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
messages: This enzyme is the target of the potent, broad-spectrum herbicide, glyphosate [n-(phosphonomethyl)glycine]. Overproduction of EPSP leads to glyphosate tolerance.
messages: chloroplast

3702:AT3G51800
gene id: 3702:AT3G51800
uniprot id: A0A178VB22
uniprot id: Q96327
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates mostly in developing organs. During early stages of organ development, promotes cell proliferation, influences cell-size threshold for division and shortens the period of meristematic activity. In postmitotic cells, enhances cell expansion.
messages: Belongs to the peptidase M24 family.
messages: Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly (By similarity). Required for expression of cell cycle genes such as CYCD3-1, RNR2A and CDKB1-1. Promotes, in a dose- and auxin-dependent manner, organ growth by stimulating both cell proliferation and expansion, via the regulation of RBR1 levels (PubMed:17024182).
messages: Cell-cycle regulated expression with accumulation during the G1-to-S phase (PubMed:15689342). Accumulates in response to auxin. Expression levels correlate with genes involved in ribosome biogenesis and function (PubMed:17024182).
messages: Component of a ribonucleoprotein complex (By similarity). Interacts with REIL1 and REIL2 (PubMed:24603461).
messages: Distorted reduced growth leading to small plants, and impaired fertility. At the seedling stage, a delay in leaf initiation and distorted leaf shape were characteristic of the silenced lines.
messages: Nucleus
messages: Strongly expressed in calls, roots and flowers, to a lower extent, in stems and siliques, but hardly detectable in leaves.

3702:AT5G62810
gene id: 3702:AT5G62810
uniprot id: Q9FXT6
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-14 family.
messages: By wounding and hydrogen peroxide, but not by jasmonate.
messages: Component of the PEX13-PEX14 docking complex, a translocon channel that specifically mediates the import of peroxisomal cargo proteins bound to PEX5 receptor (PubMed:11060021, PubMed:11978862, PubMed:17478547, PubMed:19594707). The PEX13-PEX14 docking complex forms a large import pore which can be opened to a diameter of about 9 nm (By similarity). Mechanistically, PEX5 receptor along with cargo proteins associates with the PEX14 subunit of the PEX13-PEX14 docking complex in the cytosol, leading to the insertion of the receptor into the organelle membrane with the concomitant translocation of the cargo into the peroxisome matrix (By similarity).
messages: Expressed at the early stage of germination and during the conversion of glyoxysomes to peroxisomes.
messages: Expressed in flowers, siliques, leaves and roots.
messages: Interacts with PEX13; forming the PEX13-PEX14 docking complex (By similarity). Interacts with PEX5 (via WxxxF/Y motifs) (PubMed:11978862).
messages: Peroxisome membrane

3702:AT3G46340
gene id: 3702:AT3G46340
uniprot id: Q9SNA3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT2G29360
gene id: 3702:AT2G29360
uniprot id: A0A5S9X294
uniprot id: Q9ZW19
names: Function
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.
messages: Oxidoreductase active on cyclic ketones, but not on tropinone or nortropinone.

3702:AT1G80210
gene id: 3702:AT1G80210
uniprot id: B3H5T3
uniprot id: Q8RW94
names: Similarity
messages: Belongs to the peptidase M67A family. BRCC36 subfamily.

3702:AT1G47230
gene id: 3702:AT1G47230
uniprot id: A0A5S9WMU1
uniprot id: Q3ECW2
names: Developmental Stage
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Highly expressed in the S and G2 phases and reduceed levels in the M phase.
messages: Interacts with FZR2/CCS52A1, FZR1/CCS52A2 and FZR3/CCS52B.
messages: May be due to competing acceptor splice site.

3702:AT1G14530
gene id: 3702:AT1G14530
uniprot id: A0A2H1ZEB0
uniprot id: Q948R8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant tobamovirus multiplication TOM1 protein family.
messages: Constituent of tobamovirus replication complex.
messages: Contributes to the intracellular multiplication of tobamoviruses, probably being a membrane anchor promoting the formation of the replication complex.
messages: Membrane
messages: Vacuole membrane
messages: When associated with TOM1 disruption, reduced efficiency of intracellular multiplication of tobamoviruses (e.g. crucifer strain TMV-Cg), characterized by a reduced accumulation of viral coat protein (CP) and reduced amplification of TMV-related RNAs.

3702:AT4G10950
gene id: 3702:AT4G10950
uniprot id: A0A1P8B785
uniprot id: F4JN67
names: Similarity
messages: Belongs to the 'GDSL' lipolytic enzyme family.

3702:AT4G00830
gene id: 3702:AT4G00830
uniprot id: Q9ASP6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: In young plants, expressed in the distal regions of cotyledons, throughout leaves and root apical meristem, lateral root meristems and young floral buds. Strongly detected in the vascular tissues of various organs (e.g. roots, leaves, hypocotyls, sepals, petals, anther filaments) as well as in the gynophore. In the gynoecium, mainly detected in apical and basal regions as well as in the developing ovules in these regions.
messages: Interacts with LHP1 in the nucleus on a common set of chromatin regions.
messages: Microsome
messages: Mild early flowering phenotype, reduced rosette diameter, abnormal floral developmental homeostasis and altered gynoecium growth determination associated with indeterminate ovaries growth. Production of ectopic inflorescences with severely affected flowers showing proliferation of ectopic stigmatic papillae and ovules in short-day conditions. Repression of FLC accompanied by an increase in histone H3 trimethylation on lysine 27 (H3K27me3). Altered expression of several genes, including LHP1-regulated genes (PubMed:21304947). Basal primed defense state due to changes in the basal expression of the salicylic acid (SA)- and jasmonic acid (JA)- dependent defense marker genes PR1 and PDF1.2, and altered composition of glucosinolates, a class of defense-related secondary metabolites. Reduced susceptibility to the hemi-biotrophic bacteria pathogen P.syringae and the necrotrophic ascomycete B.cinerea (PubMed:24914891).
messages: Nucleus
messages: Predominantly expressed in vascular and meristematic tissues. Expressed throughout development in seedlings, roots, leaves, floral buds and siliques.
messages: Slighty induced upon pathogen infection (e.g. P.syringae) (PubMed:24914891). Rapidly recruited to chromatin upon methyl jasmonate treatment (MeJA) to mediate transcriptional gene activation (PubMed:27495811).
messages: Transcriptional activator that binds DNA on GAGA-like motif and 5'-(C/G)ACGTG(G/T)C(A/G)-3' consensus motif in the promoters of target genes (PubMed:27495811). Component of ribonucleosomes, which are complexes of at least 20 other different heterogeneous nuclear ribonucleoproteins (hnRNP). hnRNP play an important role in processing of precursor mRNA in the nucleus (By similarity). Required during flower development and for cell fate determination (PubMed:21304947). Acts both as an antagonist and as a promoter of polycomb LHP1 gene regulation activity, depending of target genes, to regulate the transcription of stress-responsive and flowering genes (PubMed:21304947, PubMed:27495811). May regulate histone H3 trimethylation on lysine 27 (H3K27me3) (PubMed:21304947). Recognizes and binds histone H3 tails methylated at 'Lys-4' (H3K4me) and acetylated at 'Lys-9' (H3K9ac), leading to epigenetic activation. When in complex with LHP1, recognizes and binds histone H3 tails methylated at 'Lys-4' (H3K4me) and 'Lys-27' (H3K27me), mostly corresponding to stress-responsive genes (PubMed:27495811). May function as a suppressor of cell-autonomous immune responses involving glucosinolates, salicylic acid (SA) and jasmonic acid (JA) pathways toward pathogenic bacteria and fungi (PubMed:24914891).

3702:AT1G48230
gene id: 3702:AT1G48230
uniprot id: A0A178W582
uniprot id: A0A1P8AT28
uniprot id: A0A384L8U8
uniprot id: Q9LNH5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TPT transporter family. TPT (TC 2.A.7.9) subfamily.
messages: Membrane

3702:AT5G08380
gene id: 3702:AT5G08380
uniprot id: A0A1P8BFT2
uniprot id: A0A5S9Y375
uniprot id: Q9FT97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycosyl hydrolase 27 family.
messages: Homodimer.
messages: May regulate leaf (and possibly other organ) development by functioning in cell wall loosening and cell wall expansion.
messages: apoplast
messages: cell wall

3702:AT1G16310
gene id: 3702:AT1G16310
uniprot id: A0A178W9I2
uniprot id: A0A1P8ASU5
uniprot id: Q0WU02
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
messages: Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuole membrane

3702:AT3G16090
gene id: 3702:AT3G16090
uniprot id: Q9LW77
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HRD1 family.
messages: Endoplasmic reticulum membrane
messages: Probable component of the HRD1 ubiquitin ligase complex that mediates the rapid degradation of misfolded endoplasmic reticulum (ER) proteins, a process called ER-associated degradation (ERAD). Targets the misfolded LRR receptor kinase BRI1. Functions redundantly with HRD3B.

3702:AT2G28900
gene id: 3702:AT2G28900
uniprot id: A0A178VQE6
uniprot id: Q9ZV24
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family. Plastid outer envelope porin OEP16 (TC 1.B.30) subfamily.
messages: Expressed predominantly in leaves and cotyledons.
messages: Homodimer and oligomers in membrane (By similarity). Forms large complexes including TOC33, pPORA and OEP161 during pPORA import into plastids at the plastid envelope membrane.
messages: Membrane
messages: Stimulated by GTP.
messages: Strong red Pchlide fluorescence after 3.5-4 days of growth in the dark, and cell death after subsequent illumination. Conditional seedling lethal phenotype related to defects in import and assembly of NADPH:protochlorophyllide (Pchlide) oxidoreductase A; excess Pchlide accumulated in the dark operates as photosensitizer and provokes cell death during greening.
messages: Transient reduction upon de-etiolation (illuminated 5-day-old etiolated seedlings) (at protein level). Strongly induced by low-temperature stress and weakly in response to osmotic stress, salicylic acid (SA) and exogenous abscisic acid (ABA) treatments.
messages: Voltage-dependent high-conductance channel with a slight cation-selectivity; selective for amino acids but excludes triosephosphates or uncharged sugars (By similarity). Non-essential amino acid-selective channel protein and translocation pore for NADPH:protochlorophyllide oxidoreductase A (PORA) and possibly PORB. Involved in PORA precursor (pPORA) import and thus confers photoprotection onto etiolated seedlings during greening.
messages: chloroplast outer membrane
messages: etioplast membrane

3702:AT5G13280
gene id: 3702:AT5G13280
uniprot id: Q9LYU8
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the aspartokinase family.
messages: Homodimer.
messages: Inhibited by S-adenosyl-L-methionine (SAM) and lysine in a synergistic manner. No inhibition by threonine, leucine or SAM alone, and no activation or inhibition by alanine, cysteine, isoleucine, serine, valine, methionine, glutamine, asparagine, glutamic acid or arginine.
messages: Involved in the first step of essential amino acids lysine, threonine, methionine and isoleucine synthesis via the aspartate-family pathway.
messages: Only one ACT domain (ACT1) is implicated in effector binding.
messages: chloroplast

3702:AT3G43270
gene id: 3702:AT3G43270
uniprot id: A0A178VEB9
uniprot id: Q9LXK7
names: Caution
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed during late developmental phases of siliques.
messages: Expressed in siliques.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cell wall

3702:AT4G35733
gene id: 3702:AT4G35733
uniprot id: B3H6C3
names: Function
names: Subunit
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: Part of a SCF (ASK-cullin-F-box) protein ligase complex.

3702:AT2G39200
gene id: 3702:AT2G39200
uniprot id: A0A178VNS1
uniprot id: O80961
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT3G42153
gene id: 3702:AT3G42153
uniprot id: A0A1I9LLR3
names: Similarity
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.

3702:AT1G21110
gene id: 3702:AT1G21110
uniprot id: Q9LPU6
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
messages: Involved in indole glucosinolate biosynthesis. Catalyzes methoxylation reactions of the glucosinolate indole ring. Converts the hydroxy intermediates 4-hydroxy-indol-3-yl-methylglucosinolate (4OH-I3M) and 1-hydroxy-indol-3-yl-methylglucosinolate (1OH-I3M) to 4-methoxy-indol-3-yl-methylglucosinolate (4MO-I3M) and 1-methoxy-indol-3-yl-methylglucosinolate(1MO-I3M), respectively.

3702:AT2G41560
gene id: 3702:AT2G41560
uniprot id: A0A1P8AXT8
uniprot id: O22218
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calmodulin.
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIB subfamily.
messages: Catalyzes the hydrolysis of ATP coupled with the transport of calcium.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The N-terminus contains an autoinhibitory calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.
messages: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles.
messages: Vacuole membrane

3702:AT1G01530
gene id: 3702:AT1G01530
uniprot id: A0A178WE04
uniprot id: Q9LMM8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots, leaves and shoot apices.
messages: Expressed in the embryo at the globular stage and in endosperm nuclei and chalazal endosperm of developing seeds.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Plants over-expressing AGL28 show an early flowering phenotype.
messages: Probable transcription factor that may function as a floral promoter operating upstream of known floral activators in the autonomous pathway.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38995
gene id: 3702:AT2G38995
uniprot id: A0A1P8AZ46
uniprot id: A0A1P8AZ90
uniprot id: F4IU14
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Membrane
messages: Mostly expressed in flowers and siliques.

3702:AT3G51200
gene id: 3702:AT3G51200
uniprot id: A0A654FEX4
uniprot id: Q9SD26
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT3G26860
gene id: 3702:AT3G26860
uniprot id: Q1PEL2
uniprot id: Q9LW24
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G71090
gene id: 3702:AT1G71090
uniprot id: A0A178WE07
uniprot id: Q9C999
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the auxin efflux carrier (TC 2.A.69.2) family.
messages: Endoplasmic reticulum membrane
messages: Expressed in seedlings, rosette and cauline leaves, flowers and siliques.
messages: Increased root growth and lateral root initiation.
messages: Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.
messages: Membrane
messages: Up-regulated by auxin application.

3702:AT3G24210
gene id: 3702:AT3G24210
uniprot id: F4J6I7
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G10010
gene id: 3702:AT1G10010
uniprot id: O80592
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Amino acid-proton symporter. Stereospecific transporter with a broad specificity for glutamate, aspartate and neutral and acidic amino acids.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane
messages: Expressed in flower buds, siliques, developing seeds and funiculi.
messages: Found in young seeds 2 to 5 days after fertilization, but not expressed in mature seeds.
messages: Reduced seed number and silique size correlated with a specifically altered amino acid composition of young siliques.

3702:AT2G20850
gene id: 3702:AT2G20850
uniprot id: Q06BH3
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed in roots, stems, leaves and flowers. Low expression in seedlings and siliques.
messages: Membrane
messages: Not essential for epidermal patterning and not redundant with STRUBBELIG.
messages: Over-expression of SRF1B induces no obvious phenotypes while overexpression of SRF1A may lead to seedling lethality in both cv. Landsberg and cv. Columbia.
messages: Plants do not show root phenotype alteration.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT3G09880
gene id: 3702:AT3G09880
uniprot id: A0A178VQB1
uniprot id: O04376
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B56 family.
messages: Belongs to the phosphatase 2A regulatory subunit.
messages: Cytoplasm
messages: Expressed ubiquitously, higher levels in cotyledons and flowers.
messages: Nucleus
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (Probable). Interacts with BZR1 (PubMed:21258370). Interacts with BRI1 (PubMed:26517938). Interacts with SRK2E/OST1 (PubMed:26175513).
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment (By similarity). Required for the formation of the PP2A holoenzyme that positively regulates brassinosteroid signaling by dephosphorylating and activating BZR1 (PubMed:21258370).
messages: The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

3702:AT5G55855
gene id: 3702:AT5G55855
uniprot id: A0A654GBL2
uniprot id: Q3E8A8
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Cytoplasm
messages: Interacts with SAE2, SCE1, SIZ1 and MMS21 Covalently attached to a number of proteins.
messages: Nucleus
messages: Stress conditions rapidly and substantially elevates the amount of SUMO1 and SUMO2 conjugates with a concomitant reduction in the amount of free SUMO proteins. The SUMO conjugation system plays an important function in stress protection and/or repair.
messages: Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity).

3702:AT5G46280
gene id: 3702:AT5G46280
uniprot id: A0A1P8BGQ2
uniprot id: A0A1P8BGQ6
uniprot id: A0A1P8BGV8
uniprot id: A0A5S9YC52
uniprot id: Q9FL33
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as component of the MCM2-7 complex (MCM complex) which is the replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.
messages: Belongs to the MCM family.
messages: Component of the MCM2-7 complex.
messages: Component of the minichromosome maintenance (MCM) complex, a heterotetramer composed of MCM2, MCM3, MCM4, MCM5, MCM6 and MCM7. Interacts with ETG1.
messages: Expressed in root meristem, shoot apex and flower buds.
messages: Nucleus
messages: Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.

3702:AT3G54730
gene id: 3702:AT3G54730
uniprot id: P0DKG2
uniprot id: P0DKG3
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: Membrane
messages: Nucleus
messages: Plants over-expressing OFP9 have no visible phenotype.
messages: Probable transcriptional repressor that may regulate multiple aspects of plant growth and development.

3702:AT1G13650
gene id: 3702:AT1G13650
uniprot id: A0A178WE38
uniprot id: A0A384L148
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G18790
gene id: 3702:AT3G18790
uniprot id: A0A384KQ28
uniprot id: Q9LS97
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ISY1 family.
messages: Nucleus

3702:AT1G03700
gene id: 3702:AT1G03700
uniprot id: A0A178WAG7
uniprot id: Q9LR57
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers.
messages: Membrane

3702:AT3G25230
gene id: 3702:AT3G25230
uniprot id: A0A178VH19
uniprot id: Q38931
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FKBP-type PPIase family.
messages: By wounding, NaCl and by heat shock.
messages: Cytoplasm
messages: Expressed at low levels in roots, stems, leaves and flowers. Detected in the vascular elements of roots, in hydathodes and trichomes of leaves and in stigma, sepals, and anthers.
messages: Nucleus
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Co-chaperone that positively modulates thermotolerance by interacting with HSP90.1 and increasing the HSFA2-mediated accumulation of chaperones of the small-HSPs family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: This PPIase probably binds calmodulin. Interacts with HSP90-1. Forms heterodimers with FKBP65/ROF2.

3702:AT3G24230
gene id: 3702:AT3G24230
uniprot id: A0A654FB66
uniprot id: Q9LRM5
names: Cofactor
names: Similarity
messages: Belongs to the polysaccharide lyase 1 family.
messages: Binds 1 Ca(2+) ion. Required for its activity.

3702:AT2G39240
gene id: 3702:AT2G39240
uniprot id: Q1PEV9
names: Similarity
messages: Belongs to the RRN3 family.

3702:AT1G09570
gene id: 3702:AT1G09570
uniprot id: A0A178W883
uniprot id: A0A1P8AVD9
uniprot id: P14712
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phytochrome family.
messages: Blind to far-red (FR). Impaired inhibition of hypocotyl elongation and cotyledons expansion under continuous FR light conditions.
messages: Contains one covalently linked phytochromobilin chromophore.
messages: Cytoplasm
messages: Homodimer. Interacts with NDPK2 and PKS4. Stabilized by interactions with PAPP5 and FYPP3 which are enhanced in the phosphorylated Pfr form. Interacts with COP1/SPA1 complex (PubMed:12468726, PubMed:15465053, PubMed:15707897, PubMed:18390804, PubMed:18722184). Binds, via its photosensory domain, to PTAC12/HMR when photoactivated; this interaction stimulates its localization to photobodies (PubMed:22895253). Interacts with FHY1, FHL and FHY3, especially upon far-red (FR) light illumination; when underphosphorylated (PubMed:18722184, PubMed:19208901, PubMed:21884939, PubMed:19482971). Forms PHYA/FHY1/HFR1 complex (PubMed:19482971).
messages: Nucleus speckle
messages: PHYA association with FHY1 and FHY3 protect underphosphorylated PHYA from being recognized by the COP1/SPA complex.
messages: Phosphorylated.
messages: Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
messages: Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion. Involved in the flowering time regulation. Can phosphorylate FHY1 and, possibly, FHL, in red light conditions; this inactivates their co-shuttling to the nucleus (PubMed:19208901). Regulates phototropic responses both in the nucleus (e.g. hypocotyl elongation and cotyledon opening under high-irradiance conditions and seed germination under very-low-fluence conditions) and in the cytoplasm (e.g. negative gravitropism in blue light and red-enhanced phototropism) (PubMed:17566111).
messages: nucleoplasm

3702:AT3G27329
gene id: 3702:AT3G27329
uniprot id: A0A654FD32
uniprot id: B3H590
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT3G55640
gene id: 3702:AT3G55640
uniprot id: A0A1I9LSL0
uniprot id: Q9M058
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT4G34270
gene id: 3702:AT4G34270
uniprot id: A0A7G2F367
uniprot id: Q8VXY4
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the TIP41 family.
messages: Considered as a reference gene in terms of expression stability throughout development.
messages: Expressed throughout all development stages.
messages: Interacts with TAP46.
messages: May be involved in the regulation of the TOR signaling pathway. Indirectly activates the PP2A phosphatase via interaction with its suppressor TAP46. Could play a role in cytoskeleton functions.
messages: Widely expressed.

3702:AT1G10385
gene id: 3702:AT1G10385
uniprot id: F4I4B6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the EXO84 family.
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall (By similarity).
messages: The exocyst complex is composed of SEC3, SEC5, SEC6, SEC8, SEC10, EXO70A1 and EXO84.

3702:AT4G24974
gene id: 3702:AT4G24974
uniprot id: B3H7A6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT1G20920
gene id: 3702:AT1G20920
uniprot id: Q8H0U8
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily.
messages: Helicase required for pre-mRNA splicing, cold-responsive gene regulation and cold tolerance.
messages: Nucleus
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: Up-regulated by cold.

3702:AT4G32915
gene id: 3702:AT4G32915
uniprot id: A0A178V4Y9
uniprot id: F4JV80
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
messages: Belongs to the GatC family.
messages: Mitochondrion
messages: Subunit of the heterotrimeric GatCAB amidotransferase (AdT) complex, composed of A, B and C subunits.
messages: chloroplast

3702:AT1G53690
gene id: 3702:AT1G53690
uniprot id: A0A1P8AV79
uniprot id: A0A384LER3
names: Similarity
messages: Belongs to the archaeal Rpo12/eukaryotic RPC10 RNA polymerase subunit family.

3702:AT1G56340
gene id: 3702:AT1G56340
uniprot id: A0A178W6I8
uniprot id: F4I529
uniprot id: O04151
names: Caution
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the calreticulin family.
messages: Can be divided into a N-terminal globular domain, a proline-rich P-domain forming an elongated arm-like structure and a C-terminal acidic domain. The P-domain binds one molecule of calcium with high affinity, whereas the acidic C-domain binds multiple calcium ions with low affinity (By similarity).
messages: Endoplasmic reticulum lumen
messages: Induced by cadmium.
messages: Molecular calcium-binding chaperone promoting folding, oligomeric assembly and quality control in the ER via the calreticulin/calnexin cycle. This lectin may interact transiently with almost all of the monoglucosylated glycoproteins that are synthesized in the ER (By similarity).
messages: The interaction with glycans occurs through a binding site in the globular lectin domain.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: The zinc binding sites are localized to the N-domain.

3702:AT2G32120
gene id: 3702:AT2G32120
uniprot id: A0A178VUF8
uniprot id: Q9SKY8
names: Caution
names: Function
names: Similarity
messages: Belongs to the heat shock protein 70 (TC 1.A.33) family. DnaK subfamily.
messages: Belongs to the heat shock protein 70 family.
messages: In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G58300
gene id: 3702:AT5G58300
uniprot id: Q9LVM0
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT1G02140
gene id: 3702:AT1G02140
uniprot id: A0A178WA48
uniprot id: O23676
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the mago nashi family.
messages: Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). The MAGO-Y14 heterodimer inhibits the ATPase activity of EIF4A3, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The MAGO-Y14 heterodimer interacts with the EJC key regulator PYM leading to EJC disassembly in the cytoplasm (By similarity). Can increase in vitro the expression from reporter constructs that contain leader introns required for the expression of different genes. In association with MAGO and PYM, participates in intron-mediated enhancement of gene expression (PubMed:21676911). The MAGO-Y14 heterodimer works synergistically with the NMD pathway to regulate male gametophyte development (PubMed:26867216).
messages: Cytoplasm
messages: Expressed in root and shoot meristems, cotyledons, vascular tissues of leaves, receptacle of flowers and siliques, and pollen grains.
messages: Heterodimer with Y14 (PubMed:19435936, PubMed:26867216). Part of the mRNA splicing-dependent exon junction complex (EJC); the core complex contains MLN51/CASC3, EIF4A3, MAGO and Y14 (Probable). Interacts with PYM (PubMed:16953428, PubMed:21676911). The interaction with PYM is direct and dissociates the EJC from spliced mRNAs (Probable). Interacts with EIF4A3 (PubMed:26867216).
messages: Male sterility due to pollen abortion after meiosis.
messages: Nucleus
messages: Nucleus speckle
messages: P-body
messages: nucleolus

3702:AT5G20635
gene id: 3702:AT5G20635
uniprot id: A0A384LBJ1
uniprot id: Q6AWT8
names: Caution
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed in flowers and siliques.
messages: G proteins are composed of 3 units, alpha, beta and gamma.
messages: Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
messages: Leaves with a roundish shape as well as rounder and smaller flowers.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G50400
gene id: 3702:AT3G50400
uniprot id: A0A5S9XK77
uniprot id: Q9M2R9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G18460
gene id: 3702:AT3G18460
uniprot id: Q9LS44
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in heavy metals transport.
messages: Membrane

3702:AT1G66852
gene id: 3702:AT1G66852
uniprot id: A0A178W9S5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G13230
gene id: 3702:AT3G13230
uniprot id: A0A384LLP8
uniprot id: Q9LTU6
names: Similarity
messages: Belongs to the PNO1 family.

3702:AT1G08250
gene id: 3702:AT1G08250
uniprot id: A0A178W954
uniprot id: Q9SGD6
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine (PubMed:17726025). Dehydratase that uses arogenate and prephenate as substrates (PubMed:17726025). Utilzes more efficiently arogenate than prephenate (PubMed:17726025).
messages: Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: chloroplast stroma

3702:AT3G51160
gene id: 3702:AT3G51160
uniprot id: A0A178V6B0
uniprot id: P93031
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily.
messages: Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose.
messages: Expressed in roots, flowers, siliques, leaves and stems. Not expressed in the root meristem and the proximal part of the elongation zone, or in emerging lateral roots. Expressed in trichomes and guard cells, and in pollen just before anthesis.
messages: Homotetramer. Binds to GER1.

3702:AT4G30270
gene id: 3702:AT4G30270
uniprot id: A0A384LKB4
uniprot id: P24806
uniprot id: Q0WLB0
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. May be required during development to modify the walls of cells under mechanical stress.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Highly expressed. Predominantly expressed in stems. Expressed in shoot apical meristems, also found in seedlings and meristems.
messages: May be transcriptionally regulated by ANGUSTIFOLIA.
messages: N-glycosylated; essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT3G55820
gene id: 3702:AT3G55820
uniprot id: A0A654FG94
uniprot id: Q9M043
names: Similarity
messages: Belongs to the fasciclin-like AGP family.

3702:AT3G16060
gene id: 3702:AT3G16060
uniprot id: A0A178V575
uniprot id: Q940Y8
names: Disruption Phenotype
names: Function
names: Similarity
messages: Acts redundantly with KIN13A to modulate cell wall synthesis and cell expansion via the THE1 pathway.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-13 subfamily.
messages: Enlarged petals and leaves.

3702:AT3G54930
gene id: 3702:AT3G54930
uniprot id: A0A1I9LQQ0
uniprot id: A0A654FGV5
uniprot id: Q9SV41
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the phosphatase 2A regulatory subunit B56 family.
messages: Belongs to the phosphatase 2A regulatory subunit.
messages: Cytoplasm
messages: Expressed ubiquitously.
messages: PP2A consists of a common heteromeric enzyme, composed of a catalytic subunit (subunits C), a constant regulatory subunit (subunit A), and a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families).
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment.
messages: The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

3702:AT2G19150
gene id: 3702:AT2G19150
uniprot id: O64479
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Belongs to the pectinesterase family.
messages: Expressed during late developmental phases of siliques.
messages: Expressed in siliques.
messages: cell wall

3702:AT3G07410
gene id: 3702:AT3G07410
uniprot id: Q9SRS5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT2G36750
gene id: 3702:AT2G36750
uniprot id: A0A384LF39
uniprot id: Q9ZQ99
uniprot id: W8Q3B6
names: Function
names: Induction
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: Involved in the O-glucosylation of trans-zeatin and dihydrozeatin. Also active in vitro on cis-zeatin, dihydrozeatin-9-N-Glc, and olomoucine. Can detoxify the explosive 2,4,6-trinitrotoluene in plant by forming O- or C-glucose conjugates.
messages: Not induced by cytokinin treatment.

3702:AT1G64230
gene id: 3702:AT1G64230
uniprot id: A0A178WCS7
uniprot id: F4I5B8
uniprot id: F4I5C0
uniprot id: Q94F47
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: Expressed in seeds, pistils, siliques, hypocotyls and leaves.
messages: Interacts with SINAT5.

3702:AT2G38810
gene id: 3702:AT2G38810
uniprot id: A0A384KDC8
uniprot id: Q0WRN0
uniprot id: Q9SII0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Expressed mainly in meristems and dividing cells. In roots, restricted to the vasculature in the maturation zone.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity).

3702:AT3G19300
gene id: 3702:AT3G19300
uniprot id: A0A384LEB2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G14150
gene id: 3702:AT1G14150
uniprot id: A0A178W5Y9
uniprot id: Q9XI73
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the psbQ family.
messages: Impaired chloroplastic NAD(P)H dehydrogenase (NDH) activity leading to the loss of post-illumination increases in Chl fluorescence, probably due to a reduced stability of the NDH complex.
messages: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (Probable). Required for both formation and activity of the chloroplast NAD(P)H dehydrogenase (NDH) complex (PubMed:20430763, PubMed:20460499).
messages: Part of the chloroplast NDH complex, composed of a mixture of chloroplast and nucleus encoded subunits. Component of the NDH lumenal subcomplex, at least composed of PnsL1, PnsL2, PnsL3, PnsL4 and PnsL5.
messages: chloroplast thylakoid membrane

3702:AT1G22275
gene id: 3702:AT1G22275
uniprot id: P61430
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Required for chromosome synapsis and normal fidelity of crossing over.

3702:AT4G23810
gene id: 3702:AT4G23810
uniprot id: A0A178UV74
uniprot id: Q9SUP6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates during developmental leaf senescence.
messages: Belongs to the WRKY group III family.
messages: By salicylic acid (SA) (PubMed:22268143, PubMed:22325892). Strong accumulation during leaf senescence (PubMed:22268143). Down-regulated by jasmonate. Triggered by P.syringae (PubMed:22325892).
messages: Interacts with ESR/ESP and UPL5 (PubMed:17369373, PubMed:20409006). Binds to WRKY30 (PubMed:22268143).
messages: Nucleus
messages: Retarded leaf senescence, but no effects on pathogen resistance (PubMed:17369373). Increased susceptibility to P.syringae associated with reduced PR1 induction; stronger symptoms in double mutants wrky46 wrky70 and wrky46 wrky53, and triple mutant wrky46 wrky70 wrky53. In these mutants, higher induction of PDF1.2 upon jasmonic acid (MeJA) treatment (PubMed:22325892).
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:20409006). May regulate the early events of leaf senescence (PubMed:17369373, PubMed:20409006). Negatively regulates the expression of ESR/ESP (PubMed:20409006). Together with WRKY46 and WRKY70, promotes resistance to P.syringae, probably by enhancing salicylic acid (SA)- dependent genes. Contributes to the suppression of jasmonic acid (MeJA)-induced expression of PDF1.2 (PubMed:22325892).
messages: Ubiquitinated by UPL5. Ubiquitination leads to its subsequent degradation, thus controlling the timing of leaf senescence.

3702:AT4G18030
gene id: 3702:AT4G18030
uniprot id: A0A178V1V4
uniprot id: Q94EJ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Golgi apparatus membrane
messages: Membrane

3702:AT5G55700
gene id: 3702:AT5G55700
uniprot id: A0A178U7M4
uniprot id: F4K4Z1
uniprot id: Q9FM68
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 14 family.
messages: In contrast to other members of the family, lacks the conserved Glu active site in position 473, which is replaced by an Arg residue, explaining why it is inactive.
messages: No alpha-1,4-glucan hydrolase activity, including beta-amylase, alpha-amylase, a-glucosidase or alpha-amyloglucosidase. However, facilitates or regulates starch breakdown, especially at night, by a mechanism involving direct interaction with starch or other alpha-1,4-glucan.
messages: Preferentially expressed in vascular tissue of cotyledons, leaves, petioles, stems, petals, siliques and roots, particularly in phloem. Also present in root tip.
messages: Slightly retarded growth rate and reduced starch breakdown in leaves during the night.
messages: chloroplast

3702:AT4G28110
gene id: 3702:AT4G28110
uniprot id: Q9M0J5
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Induced by salt stress (PubMed:19211694, PubMed:25060192). Induced by osmotic stress (PubMed:19211694). Induced by abscisic acid (PubMed:25060192).
messages: Interacts with MPK6.
messages: Nucleus
messages: Phosphorylated at Ser-251 by MPK6 in response to salt stress. Phosphorylation is required for its function in salt stress tolerance.
messages: Transcription factor involved in salt stress response. Confers tolerance to salt stress (PubMed:22575450). Involved in distinct cellular processes in response to osmotic stress, including control of primary metabolism and negative regulation of short-term transcriptional responses to osmotic stress (PubMed:19211694). Can activate the steps necessary for aliphatic suberin synthesis and deposition of cell wall-associated suberin-like lamellae. Involved in the production of aliphatic suberin under abiotic stress conditions (PubMed:25060192).

3702:AT3G10740
gene id: 3702:AT3G10740
uniprot id: A0A178VHD8
uniprot id: A0A1I9LPN8
uniprot id: Q9SG80
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 51 family.
messages: Expressed in roots, leaves, flowers, stems, siliques and seedlings. Observed in zones of cell proliferation, the vascular system and floral abscission zones. Expressed in the guard cells in stems, in xylem vessels and parenchyma cells surrounding the vessels, in the cambium and in the phloem, but not in the secondary xylem.
messages: May be involved in the coordinated dissolution of the cell wall matrix during abscission and in the secondary cell wall formation in xylem vessels. Prefers arabinoxylan, but may also use pectic arabinans as substrates.
messages: No visible phenotype; even in asd1 and asd2 double mutant.
messages: Not induced by hormones or during leaf senescence.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: extracellular matrix

3702:AT5G13670
gene id: 3702:AT5G13670
uniprot id: A0A654G0Q2
uniprot id: Q9FNA5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Membrane

3702:AT3G11770
gene id: 3702:AT3G11770
uniprot id: Q9SF21
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 3'-to-5' exoribonuclease (RNase) specifically targeting single-stranded RNAs (PubMed:28463111). Triggers miRNA accumulation in RNA-induced silencing complex (RISC), composed of miRNAs and AGO proteins, by degrading uridylated cleavage fragments (PubMed:28463111). Required during plant growth and development (PubMed:28463111).
messages: Belongs to the RICE family.
messages: Cytoplasm
messages: Homohexamer with DnaQ-like exonuclease fold in a ring-shaped structure with a central cavity (PubMed:28463111). Component of AGO1 and AGO10-centered RNA-induced silencing complexes (RISC) (PubMed:28463111). Interacts with and acts as a cofactor of AGO1 and AGO10 (PubMed:28463111).
messages: Little effect on miRNAs levels (PubMed:28463111). Plants lacking both RICE1 and RICE2 have reduced miRNAs levels and lower miRNA retained by AGO1, thus leading to the up-regulation of targeted mRNA transcripts (PubMed:28463111).
messages: Ubiquitously expressed throughout development in germinating seeds, cotyledons, leaves and roots of young seedlings and adult plants, stems and inflorescence.

3702:AT5G39100
gene id: 3702:AT5G39100
uniprot id: P92997
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:ArthCp083
gene id: 3702:ArthCp083
uniprot id: A0A1B1W513
uniprot id: P56786
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ycf2 family.
messages: Probable ATPase of unknown function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.
messages: chloroplast stroma

3702:AT2G29900
gene id: 3702:AT2G29900
uniprot id: A0A178VTM4
uniprot id: Q9SIK7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase A22A family.
messages: Endoplasmic reticulum membrane
messages: Golgi apparatus membrane
messages: Homodimer.
messages: Homodimer. Probable component of the gamma-secretase complex, a complex composed of a presenilin homodimer, nicastrin, APH1 and PEN2 (By similarity).
messages: Membrane
messages: Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
messages: The PAL motif is required for normal active site conformation.

3702:AT1G21780
gene id: 3702:AT1G21780
uniprot id: Q9XHZ8
names: Domain
names: Function
names: Subunit
messages: Homodimer. Interacts with CUL3A and CUL3B.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT1G23200
gene id: 3702:AT1G23200
uniprot id: A0A654EC85
uniprot id: O49298
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in rosette leaves, flower and siliques.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: Low expression in vegetative and flower stages. No expression in young siliques but highly expressed in older siliques.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT5G04130
gene id: 3702:AT5G04130
uniprot id: Q94BZ7
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner.
messages: Belongs to the type II topoisomerase GyrB family.
messages: Binds two Mg(2+) per subunit. The magnesium ions form salt bridges with both the protein and the DNA. Can also accept other divalent metal cations, such as Mn(2+) or Ca(2+).
messages: Made up of two chains. The A chain is responsible for DNA breakage and rejoining; the B chain catalyzes ATP hydrolysis.
messages: May be due to an intron retention.
messages: Mitochondrion

3702:AT2G42580
gene id: 3702:AT2G42580
uniprot id: Q9SIN1
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subunit
names: Tissue Specificity
messages: Altered vein pattern in cotyledons and primary leaves. Mutant seedlings show increased sensitivity to osmotic and salt stresses in roots.
messages: By salt treatment in cotyledons and cold stress in pollen (PubMed:12805584, PubMed:22232384). Repressed by auxin (e.g. IAA) (PubMed:19000166).
messages: Expressed in embryos and organ primordia in shoot and root. In primary and cauline leaves and petals, is expressed in hydathodes, guard cells, petiole cells and cells associated with differentiating vascular bundles.
messages: Interacts with BRL2.
messages: Involved in osmotic and salt stress tolerance. May play a role in the control of meristematic cell size during osmotic stress. May function as an adapter protein for BRL2 and may be required for signaling affecting leaf vascular tissue pattern formation.
messages: The thioredoxin domain is inactive.

3702:AT3G52180
gene id: 3702:AT3G52180
uniprot id: Q9FEB5
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
messages: Contains a C-terminal polysaccharide-binding domain which interacts with the phosphatase domain; this interaction is required for glucan phosphatase activity.
messages: Expressed with a circadian rhythm showing a peak at the end of the day and then decreasing to reach the lowest levels at the end of the night.
messages: Reduced plant size, slightly delayed flowering, leaves with large round starch granules and starch in excess.
messages: Starch binding efficiency is dependent on pH and redox conditions.
messages: Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. Acts as major regulator of the initial steps of starch degradation at the granule surface. Functions during the day by dephosphorylating the night-accumulated phospho-oligosaccharides. Can release phosphate from both the C6 and the C3 positions, but dephosphorylates preferentially the C6 position (PubMed:20018599, PubMed:26231210).
messages: chloroplast

3702:AT1G55850
gene id: 3702:AT1G55850
uniprot id: Q8VZK9
uniprot id: W8PVZ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like E subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

3702:AT1G78450
gene id: 3702:AT1G78450
uniprot id: A0A654EQ29
uniprot id: Q9SYN6
names: Similarity
messages: Belongs to the HEBP family.

3702:AT5G24320
gene id: 3702:AT5G24320
uniprot id: A0A178U7I0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G30545
gene id: 3702:AT1G30545
uniprot id: A0A1P8ASE2
uniprot id: A0A1P8ASE3
uniprot id: A0A654EFR2
names: Similarity
messages: Belongs to the methyltransferase superfamily. Trimethylguanosine synthase family.

3702:AT1G21550
gene id: 3702:AT1G21550
uniprot id: Q9LPK5
names: Caution
names: Function
messages: Although assigned as a calmodulin family member by Ref.4, it only contains EF-hand domains.
messages: Potential calcium sensor.

3702:AT3G25760
gene id: 3702:AT3G25760
uniprot id: Q2HIV2
uniprot id: Q9LS03
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the allene oxide cyclase family.
messages: By dehydration stress. High local and systemic induction by wounding.
messages: Highly expressed in fully developed leaves.
messages: Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.
messages: The four allene oxide cyclase proteins (AOC1, AOC2, AOC3 and AOC4) are encoded by duplicated genes. They are very similar, and most experiments involving antibodies do not discriminate between the different members.
messages: chloroplast

3702:AT1G64010
gene id: 3702:AT1G64010
uniprot id: A0A1P8ANB3
uniprot id: A0A5S9WS95
uniprot id: A0A654EKU3
uniprot id: Q4PSX9
names: Similarity
messages: Belongs to the serpin family.

3702:AT1G80370
gene id: 3702:AT1G80370
uniprot id: A0A178WID3
uniprot id: Q9C968
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.

3702:AT4G29820
gene id: 3702:AT4G29820
uniprot id: Q94AF0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Nudix hydrolase family. CPSF5 subfamily.
messages: Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing. Involved in association with CPSF6 or CPSF7 in pre-MRNA 3'-end poly(A) site cleavage and poly(A) addition. NUDT21/CPSF5 binds to cleavage and polyadenylation RNA substrates. The homodimer mediates simultaneous sequence-specific recognition of two 5'-UGUA-3' elements within the pre-mRNA. Binds to, but does not hydrolyze mono- and di-adenosine nucleotides. May have a role in mRNA export.
messages: Homodimer. Component of the cleavage factor Im (CFIm) complex (By similarity). Forms a complex with cleavage and polyadenylation specificity factor (CPSF) subunits FIPS5 (PubMed:16282318, PubMed:18479511).
messages: Nucleus

3702:AT1G20610
gene id: 3702:AT1G20610
uniprot id: Q9LDM4
names: Developmental Stage
names: Similarity
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Expressed in the G2/M phases.

3702:AT3G45290
gene id: 3702:AT3G45290
uniprot id: Q94KB9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MLO family.
messages: May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)-dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity).
messages: Membrane
messages: The C-terminus contains a calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.

3702:AT1G05680
gene id: 3702:AT1G05680
uniprot id: A0A0K1SBE8
uniprot id: A0A654E793
uniprot id: Q9SYK9
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glycosyltransferase family.
messages: By H(2)O(2) and abiotic stresses.
messages: Expressed in roots, cotyledons and leaf hydathodes.
messages: Glucosyltransferase that acts on the auxin indole-3-butyric acid (IBA). Mediates abiotic stress responses and stress-induced morphological adaptations by regulating auxin homeostasis. Possesses low activity in vitro on jasmonate (JA) and the synthetic auxin analog naphthaleneacetic acid (NAA).
messages: No visible phenotype under normal growth condition.
messages: Plants overexpressing UGT74E2 develop more compact rosette structure with shorter petioles, dark-green leaves and a shoot branching phenotype after inflorescence emergence. Mature plants are shorter than wild-type. Over-expression of UGT74E2 increases plant tolerance to osmotic stress.

3702:AT5G39365
gene id: 3702:AT5G39365
uniprot id: Q2V325
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G18380
gene id: 3702:AT2G18380
uniprot id: A0A178VWM7
uniprot id: Q9ZPX0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class B subfamily.
messages: Nucleus
messages: Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

3702:AT3G04010
gene id: 3702:AT3G04010
uniprot id: A0A384KW68
uniprot id: Q9SQR1
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT2G39890
gene id: 3702:AT2G39890
uniprot id: P92961
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.3) subfamily.
messages: Cell membrane
messages: Expressed in vascular tissues of roots, leaves, stems, sepals, petals, stamen and siliques. Expressed in pollen.
messages: No visible phenotype under normal growth conditions.
messages: Proline transporter that mediates proline and glycine betaine transport. May be involved in long-distance transport of proline and required for phloem loading, retrieval of proline leaking from the phloem, or in xylem-to-phloem transfer. When expressed in a heterologous system (yeast), imports D- and L-proline, glycine betaine and GABA across the plasma membrane. Has the same affinity for D- and L-proline.
messages: Treatment with toxic concentrations of proline reduces shoot growth and root elongation in wild-type plants, while plant lines over-expressing PROT1 stop growing shortly after unfolding of cotyledons.

3702:AT2G42120
gene id: 3702:AT2G42120
uniprot id: F4IM00
uniprot id: O48520
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase delta/II small subunit family.
messages: Heterodimer with subunits of 125 kDa and 50 kDa.
messages: Nucleus
messages: The function of the small subunit is not yet clear.

3702:AT4G27990
gene id: 3702:AT4G27990
uniprot id: Q9SUE0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YggT family.
messages: No visible phenotype under normal growth conditions.
messages: Not required for the biogenesis and accumulation of native cytochrome b6 in the thylakoid membrane. Not functionally involved in the pathway for covalent binding of the c-type heme to cytochrome b6.
messages: chloroplast thylakoid membrane

3702:AT1G29200
gene id: 3702:AT1G29200
uniprot id: A0A7G2DZK4
uniprot id: B3H6X4
uniprot id: F4HZX7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT4G19985
gene id: 3702:AT4G19985
uniprot id: A0A1P8B7M6
uniprot id: A0A1P8B7M9
uniprot id: A0A1P8B7P8
uniprot id: A0A654FR55
uniprot id: Q940H2
names: Similarity
names: Subunit
messages: Belongs to the acetyltransferase family. GNA1 subfamily.
messages: Homodimer.

3702:AT4G24170
gene id: 3702:AT4G24170
uniprot id: A0A5S9XVC0
uniprot id: F4JQ51
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.

3702:AT5G10860
gene id: 3702:AT5G10860
uniprot id: Q9LEV3
names: Subcellular Location Annotation
messages: Mitochondrion

3702:AT1G65060
gene id: 3702:AT1G65060
uniprot id: Q9S777
names: Domain
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Both substrate-binding domains (SBD1 and SBD2) are involved in the substrate recognition, and are sufficient to confer the substrate specificity.
messages: By UV irradiation.
messages: Preferentially expressed in leaves, flowers and siliques.
messages: Produces CoA thioesters of a variety of hydroxy- and methoxy-substituted cinnamic acids, which are used to synthesize several phenylpropanoid-derived compounds, including anthocyanins, flavonoids, isoflavonoids, coumarins, lignin, suberin and wall-bound phenolics (PubMed:10417722). Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioesters (By similarity).

3702:AT4G33200
gene id: 3702:AT4G33200
uniprot id: A0A1P8B454
uniprot id: A0A654FV23
uniprot id: F4JVZ4
uniprot id: F4JVZ5
uniprot id: Q0WPU1
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily.
messages: Cytoplasm
messages: Homodimer (By similarity). Interacts with MYOB1 and MYOB7 (PubMed:23995081). Interacts with WIT1 and WIT2 (PubMed:23973298, PubMed:25759303). Core component of the LINC complex which is composed of inner nuclear membrane SUN domain-containing proteins coupled to outer nuclear membrane WIP and WIT proteins. The LINC complex also involves nucleoskeletal proteins CRWN/LINC and possibly KAKU4 and the cytoskeletal myosin KAKU1 (PubMed:25759303).
messages: IQ domain mediates interaction with calmodulin.
messages: Impaired nuclear movement. Abnormal nucleus shape with invaginated envelope.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Involved in trafficking of Golgi stacks and mitochondria. Plays a role in nuclear shape determination. Drives nuclear movement along actin filaments (PubMed:23973298). As component of the SUN-WIP-WIT2-KAKU1 complex, mediates the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes (PubMed:25759303).
messages: Nucleus membrane
messages: The tail domain is a globular cargo-binding domain.

3702:AT1G02020
gene id: 3702:AT1G02020
uniprot id: A0A178WM28
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G39810
gene id: 3702:AT4G39810
uniprot id: F4JJ23
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in the sieve elements and phloem pole pericycle cells.
messages: Nucleus
messages: Probable exonuclease required for enuclation of sieve elements.
messages: Regulated by the transcription factors NAC045 and NAC086.
messages: Shorter root phenotype and impaired phloem function.

3702:AT1G55090
gene id: 3702:AT1G55090
uniprot id: A0A178W7V9
uniprot id: Q9C723
names: Similarity
messages: In the C-terminal section; belongs to the NAD synthetase family.

3702:AT3G49180
gene id: 3702:AT3G49180
uniprot id: Q9M3B4
names: Function
messages: Involved in meristem development. Acts as negative regulator of the CUC-STM pathway in shoot apical meristem (SAM) neo-formation.

3702:AT1G60800
gene id: 3702:AT1G60800
uniprot id: A0A384LIN7
uniprot id: A0A654EJS3
uniprot id: Q93ZS4
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Enhanced susceptibility to geminivirus infection.
messages: Expressed in seedlings, leaves and flowers.
messages: Inhibited by the viral nuclear shuttle protein (NSP) that binds to the region required for oligomerization.
messages: Involved in defense response to geminivirus infection.
messages: Oligomer. Interacts with geminivirus nuclear shuttle protein (NSP).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G28650
gene id: 3702:AT4G28650
uniprot id: A0A178V5Y0
uniprot id: Q9M0G7
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylation induced by the interaction with LURE1.2.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in pollen tubes.
messages: Homodimer. Interacts with MDIS1 and LURE1.2.
messages: Involved in the regulation of procambium maintenance and polarity during vascular-tissue development (PubMed:17570668). Involved in the pollen tube perception of the female signal (PubMed:26863186). Phosphorylates MDSI1 (PubMed:26863186).
messages: Reduced procambial cells number, and adjacent or interspersed xylem and phloem formation.

3702:AT4G39540
gene id: 3702:AT4G39540
uniprot id: A0A178UTT0
uniprot id: F4JW33
uniprot id: Q8GY88
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the shikimate kinase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
messages: Inactivated by heat (37 degrees Celsius).
messages: Monomer.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT1G64583
gene id: 3702:AT1G64583
uniprot id: P0C7R3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G20960
gene id: 3702:AT5G20960
uniprot id: Q7G193
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Aldehyde oxidases (AO) are homodimers and heterodimers of AO subunits. AO-alpha is an AAO1 homodimer; AO-beta is an AAO1-AAO2 heterodimer.
messages: Belongs to the xanthine dehydrogenase family.
messages: Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.
messages: Binds 2 [2Fe-2S] clusters.
messages: Cytoplasm
messages: In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. AO-alpha may be involved in the biosynthesis of auxin, and in biosynthesis of abscisic acid (ABA) in seeds. In vitro, AO-alpha uses heptaldehyde, protocatechualdehyde, benzaldehyde, indole-3-aldehyde (IAld), indole-3-acetaldehyde (IAAld), cinnamaldehyde and citral as substrates; AO-beta uses IAAld, IAld and naphtaldehyde as substrates.
messages: Predominantly expressed in roots, seedlings, mature siliques and seeds, and to lower extent in stems and rosettes. In seedlings, mostly expressed in lower part of hypocotyls and roots.
messages: Strongly inhibited by iodoacetate and potassium cyanide (KCN). Weakly inhibited by 2-mercaptoethanol, dithiothreitol (DTT), menadione, estradiol, 4'-(9-acridinylamino)methanesulfon-m-anisidine (mAMSA), allopurinol and tritonX-100. Not affected by p-chloromercuribenzoate.

3702:AT4G26420
gene id: 3702:AT4G26420
uniprot id: F4JUY5
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily. Type-7 methyltransferase family. SABATH subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Expressed in siliques, developing seeds, anthers and germinating seeds. Not detected in leaves, stems, flowers and roots.
messages: Expression begins at early stages of silique development, peaks in the second half of this process and decreases after the start of desiccation.
messages: Methylates the carboxyl group of several gibberellins (GAs). Substrate preference is GA9 > GA20 > GA3 > GA4 > GA34 > GA51 > GA1 > GA19 > GA12. No activity with diterpenes abietic acid and ent-kaurenoic acid.
messages: No visible phenotype, even in gamt1 and gamt2 double mutants.
messages: Overexpression of GAMT1 results in dwarf phenotype.
messages: Up-regulated by K(+) and NH(4+), down-regulated by Zn(2+), Cu(2+), Fe(2+) and Fe(3+).

3702:AT2G23140
gene id: 3702:AT2G23140
uniprot id: O22193
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT4G20645
gene id: 3702:AT4G20645
uniprot id: P0CJ60
uniprot id: Q9SVI0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G28550
gene id: 3702:AT1G28550
uniprot id: Q9S810
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT1G77880
gene id: 3702:AT1G77880
uniprot id: A0A178WG62
uniprot id: A0A178WI27
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G21430
gene id: 3702:AT1G21430
uniprot id: Q9LPL3
names: Developmental Stage
names: Function
names: Induction
names: Similarity
messages: Belongs to the FMO family.
messages: Expression relatively broad during early stages of embryogenesis and more restricted to discrete groups of cells in mature embryos. Later, expression mainly restricted to the cotyledons and the apical meristem.
messages: Involved in auxin biosynthesis.
messages: Up-regulated by drought.

3702:AT2G31030
gene id: 3702:AT2G31030
uniprot id: Q8S8P9
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the OSBP family.
messages: Expressed at low levels in flowers.
messages: May be involved in the transport of sterols.

3702:AT5G38420
gene id: 3702:AT5G38420
uniprot id: P10797
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: There are four genes coding for RBS in Arabidopsis thaliana.
messages: chloroplast

3702:AT1G27450
gene id: 3702:AT1G27450
uniprot id: A0A178W2J6
uniprot id: A0A7G2DWB6
uniprot id: F4HSX1
uniprot id: P31166
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. Contributes primarily to the recycling of adenine into adenylate nucleotides, but is also involved in the inactivation of cytokinins by phosphoribosylation. Catalyzes the conversion of cytokinins from free bases (active form) to the corresponding nucleotides (inactive form).
messages: Cytoplasm
messages: Homodimer.
messages: Male sterility due to pollen abortion after meiosis. Accumulation of free bases of cytokinins and enhanced resistance to exogenous cytokinins.
messages: Plants with reduced activity of APT1 and increased levels of cellular adenine show enhanced stress tolerance and improve growth, leading to increases in plant biomass.
messages: chloroplast

3702:AT4G39740
gene id: 3702:AT4G39740
uniprot id: A0A178V000
uniprot id: Q8LAL0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SCO1/2 family.
messages: Expressed in the whole plant with highest expression in imbibed seeds and embryos, and the root hair zone.
messages: Mitochondrion inner membrane
messages: No visible phenotype.
messages: Thought to play a role in cellular copper homeostasis, mitochondrial redox signaling or insertion of copper into the active site of COX (By similarity). Participates in copper and redox homeostasis.

3702:AT1G22840
gene id: 3702:AT1G22840
uniprot id: A0A178W284
uniprot id: B3H4Y9
uniprot id: O23138
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c family.
messages: Binds 1 heme c group covalently per subunit.
messages: Binds 1 heme group per subunit.
messages: Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity).
messages: Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
messages: Interacts with CCMH (via N-terminus) (PubMed:16236729). Interacts with CCMFN2 (PubMed:18644794).
messages: Mitochondrion intermembrane space

3702:AT1G51070
gene id: 3702:AT1G51070
uniprot id: A0A178W1E6
uniprot id: F4I7Z3
uniprot id: Q9C682
names: Caution
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer (Probable). Interacts with BTS and BHLH47/PYE (PubMed:20675571, PubMed:25452667).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G36540
gene id: 3702:AT4G36540
uniprot id: A0A178URK0
uniprot id: Q93VJ4
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in stems and flowers.
messages: Homodimer.
messages: Induced by flagellin, jasmonic acid (JA), brassinosteroid and cytokinin, and repressed by abscisic acid. Insensitive to gibberellic acid.
messages: May be due to a competing acceptor splice site.
messages: No visible phenotype. Redundant with BEE1 and BEE3.
messages: Nucleus
messages: Positive regulator of brassinosteroid signaling.

3702:AT1G12880
gene id: 3702:AT1G12880
uniprot id: Q93ZY7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: Mitochondrion
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.

3702:AT5G67610
gene id: 3702:AT5G67610
uniprot id: A0A654GEZ6
uniprot id: F4K567
uniprot id: Q9FJW2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NEMP family.
messages: Nucleus inner membrane

3702:AT5G49230
gene id: 3702:AT5G49230
uniprot id: A0A178UMS2
uniprot id: A0A654G9F1
uniprot id: G0XQD4
uniprot id: Q9FJ17
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Di19 family.
messages: Expressed in seedlings, roots, leaves, stems, flowers and siliques.
messages: Induced 3.1-fold by red light, 2.6-fold by far-red light, and 2.3-fold by blue light. Not induced by abscisic acid.
messages: Involved in both red and blue light signaling.
messages: Not phosphorylated in vitro by CPK3 or CPK11.
messages: Nucleus
messages: Plants show a hypersensitive hypocotyl growth response to both red and blue light.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G20696
gene id: 3702:AT1G20696
uniprot id: A0A178W6Y6
uniprot id: A0A1P8ATG5
uniprot id: A0A1P8ATJ7
uniprot id: A0A2H1ZEC3
uniprot id: A0A5S9VCC0
uniprot id: P93047
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HMGB family.
messages: Binds preferentially double-stranded DNA.
messages: Expressed in lateral roots, root tips, stems, cotyledons, leaves and flowers (excluding ovary and pedicels).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Up-regulated by cold stress, but down-regulated by drought and salt stress.
messages: cytosol

3702:AT2G01905
gene id: 3702:AT2G01905
uniprot id: Q9C5X2
names: Developmental Stage
names: Similarity
messages: Belongs to the cyclin family.
messages: Expressed in 7 day- and 14 day old seedlings.

3702:AT3G16140
gene id: 3702:AT3G16140
uniprot id: A0A384L3S5
uniprot id: Q0WWU6
uniprot id: Q9SUI7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the psaH family.
messages: Membrane
messages: Possible role could be the docking of the LHC I antenna complex to the core complex.
messages: chloroplast thylakoid membrane

3702:AT3G06820
gene id: 3702:AT3G06820
uniprot id: F4JC55
names: Similarity
messages: Belongs to the peptidase M67A family. BRCC36 subfamily.

3702:AT2G44580
gene id: 3702:AT2G44580
uniprot id: F4IU60
names: Similarity
messages: Belongs to the DCC1 family.

3702:AT4G27890
gene id: 3702:AT4G27890
uniprot id: Q9STN7
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Cytoplasmic granule
messages: Small heat shock protein required for the establishment of auxin gradients and for patterning of the apical domain of the embryo. Involved in the specification of the cotyledon primordia. Also required for normal inflorescence and floral meristem function, normal developmental patterning and thermotolerance. Acts as a molecular chaperone (By similarity).
messages: Up-regulated by heat shock.

3702:AT1G03100
gene id: 3702:AT1G03100
uniprot id: Q9SA60
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT3G16960
gene id: 3702:AT3G16960
uniprot id: A0A384KYC8
uniprot id: F4J3Y5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G08110
gene id: 3702:AT1G08110
uniprot id: A0A384L3N6
uniprot id: B9DGB2
uniprot id: B9DH52
uniprot id: Q8H0V3
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the glyoxalase I family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G02310
gene id: 3702:AT1G02310
uniprot id: A0A178WL81
uniprot id: A0A384KW48
uniprot id: A0A654E7D2
uniprot id: Q9FZ29
names: Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 5 (cellulase A) family.
messages: Expressed in roots, stems and flowers.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G25310
gene id: 3702:AT1G25310
uniprot id: Q9FRI0
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer.
messages: Nucleus
messages: Required during early embryo development, for the endosperm formation.

3702:AT3G54970
gene id: 3702:AT3G54970
uniprot id: A0A384KYD0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G23750
gene id: 3702:AT3G23750
uniprot id: Q9LK43
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed in roots, leaves, stems, siliques and flowers (PubMed:23613767). Ubiquitous, with a high expression in mature pollen grains and in the pericycle and the xylem vasculature of the primary and lateral roots (PubMed:23921992).
messages: Initially up-regulated by exogenous auxin or brassinosteroid but down-regulated after a prolonged treatment. Down-regulated by abscisic acid, gibberellic acid or cytokinin.
messages: Interacts with BAK1 (via kinase domain), SERK4 and SERK5.
messages: Involved in auxin signal transduction and cell expansion and proliferation regulation (PubMed:23613767). May be involved in brassinosteroid-mediated plant growth and development via auxin regulation (PubMed:23921992). May be involved in microspore and pollen development (PubMed:23921992).
messages: Membrane
messages: No visible phenotype (PubMed:23613767). Tmk2 and tmk4 double mutants, tmk3 and tmk4 double mutants and tmk2, tmk3 and tmk4 triple mutants have no visible phenotypes (PubMed:23613767). Tmk1 and tmk4 double mutants, tmk1, tmk2 and tmk4 triple mutants and tmk1, tmk3 and tmk4 triple mutants have a severe reduction in organ size, a substantial delay in growth and development, and a decrease in fertility (PubMed:23613767). Tmk1, tmk2, tmk3 and tmk4 quadruple mutants are embryo lethal (PubMed:23613767, PubMed:24578577).
messages: The leucine-rich repeat (LRR) domain is disrupted by a non-LRR region, resulting in the formation of two LRR solenoid structures shaped like the Arabic number '7'. This is strikingly different from the horseshoe structures of the canonical LRR proteins.

3702:AT1G05675
gene id: 3702:AT1G05675
uniprot id: A0A1W6AJW6
uniprot id: A0A654E8C5
uniprot id: P0C7P7
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G35625
gene id: 3702:AT1G35625
uniprot id: F4HZZ4
names: Function
names: Subcellular Location Annotation
messages: Involved in the trafficking of vacuolar proteins. May function as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) (By similarity).
messages: Prevacuolar compartment membrane
messages: Protein storage vacuole membrane

3702:AT4G16420
gene id: 3702:AT4G16420
uniprot id: A0A5S9XTU9
uniprot id: A0A654FQ35
uniprot id: Q9ATB4
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acetylated in vitro by GCN5, but acetylation is not essential for biological activity.
messages: Expressed in roots, leaves, stems, flowers and siliques, with the strongest activity in the meristematic zones.
messages: Interacts in vitro with the HAT domain of GCN5 and with the DNA-binding domain of the transcriptional activator DREB1B/CBF1 (PubMed:11266554, PubMed:16603259). Interacts with BZIP11 (PubMed:24861440).
messages: Nucleus
messages: Plants have pleiotropic effects on plant growth and development, including dwarf size, aberrant root development, and short petals and stamens in flowers. ADA2a cannot rescue any of the mutant phenotypes.
messages: Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region. Mediates auxin and cytokinin signals in the control of cell proliferation and might be involved in repression of a freezing tolerance pathway at warm temperature (PubMed:12615937, PubMed:12747832). Involved in the positive regulation of salt-induced gene expression by maintaining locus-specific acetylation of histones H4 and H3 (PubMed:21193996).
messages: The middle domain of ADA2b is sufficient for interaction with the HAT catalytic domain of GCN5.

3702:AT2G32660
gene id: 3702:AT2G32660
uniprot id: A0A7G2EAS2
uniprot id: O48851
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.

3702:AT3G16320
gene id: 3702:AT3G16320
uniprot id: Q06AN9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the APC3/CDC27 family.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication. Functionally redundant with CDC27B in the control of gametophyte development.
messages: No visible phenotype. Cdc27a and cdc27b double mutant is gametophytic lethal (PubMed:17944809).
messages: Nucleus
messages: The APC/C is composed of at least 10 subunits. Interacts with APC2 and APC10.

3702:AT5G08505
gene id: 3702:AT5G08505
uniprot id: Q2V390
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT2G37260
gene id: 3702:AT2G37260
uniprot id: A0A384L2V3
uniprot id: A7BI37
uniprot id: A8MRJ2
uniprot id: C0SV76
uniprot id: Q9ZUU0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the WRKY group I family.
messages: Leaf promordia, trichomes, atrichoblasts, fertilized eggs, seed coat.
messages: Not induced by salicylic acid or wounding.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates trichome development, production of mucilage and tannin in seed coats, and maybe root hair development.

3702:AT1G73400
gene id: 3702:AT1G73400
uniprot id: Q9FX35
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT1G35670
gene id: 3702:AT1G35670
uniprot id: Q39016
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: By drought and high-slat stress, but not by low-temperature, heat stress or abscisic acid treatment.
messages: Cytoplasm
messages: Interacts with Di19.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger. Functions as regulator of the calcium-mediated abscisic acid (ABA) signaling pathway. Phosphorylates ABA-responsive transcription factors ABF1 and ABF4 in vitro.
messages: Mutant cpk11-2 shows reduced ABA and salt responsiveness in seed germination.
messages: Nucleus
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (290-320) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT3G13790
gene id: 3702:AT3G13790
uniprot id: A0A1I9LRX7
uniprot id: A0A5S9XBW4
uniprot id: A0A7G2EKG3
uniprot id: F4JEJ0
uniprot id: Q43866
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 32 family.
messages: Beta-fructofuranosidase that can use sucrose and 1-kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline.
messages: By wounding, aeroponic growth condition, darkness, sucrose, glucose and mannitol.
messages: Expressed in seedlings, leaves, flowers, and seeds.
messages: apoplast
messages: cell wall

3702:AT2G44620
gene id: 3702:AT2G44620
uniprot id: A0A654F372
uniprot id: P53665
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of the apo-ACP-like protein.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of short and medium chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain (By similarity).
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion

3702:AT5G13750
gene id: 3702:AT5G13750
uniprot id: A0A178UFA6
uniprot id: Q94BZ1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily.
messages: By 2,4-D treatment.
messages: Cell membrane
messages: Expressed throughout development.
messages: Heterologous expression of ZIFL1 in yeast leads to increased resistance to 2,4-dichlorophenoxyacetic acid (2,4-D), indole-3-acetic acid (IAA), aluminum and thallium. Not involved in zinc stress resistance.
messages: Major facilitator superfamily (MFS) transporter probably involved in 2,4-dichlorophenoxyacetic acid (2,4-D) export (PubMed:19440702). K(+) may be the physiological substrate of the transporter (PubMed:23524662).
messages: Mediates drought stress tolerance by regulating stomatal closure.
messages: Membrane
messages: Modulates root auxin-related processes. Involved in auxin efflux and acts as a positive regulator of shootward transport at the root apex. May mediate proton efflux from the vacuolar compartment.
messages: No visible phenotype when grown under normal conditions (PubMed:23524662). No visible phenotype when grown in presence of zinc (PubMed:17277087). Hypersensitivity to drought stress and auxin-related defects (PubMed:23524662).
messages: Predominantly expressed in roots and stomatal guard cells. Detected in anther stamen filaments and shoot apical meristem. In the mature portion of roots, restricted to the cortex. At the root tip, highly expressed in both the cortical and epidermal cell layers of the apical meristem and the transition zone, while absent from the quiescent center or the columella cells. Not detected in lateral root primordia.
messages: Vacuole membrane

3702:AT2G42885
gene id: 3702:AT2G42885
uniprot id: Q8GY39
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G13700
gene id: 3702:AT4G13700
uniprot id: A0A1P8B627
uniprot id: Q6TPH1
names: Cofactor
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate.
messages: Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.
messages: Binds 1 Fe cation per subunit.
messages: Binds 1 Mn(2+) ion per subunit.
messages: First observed in the floral apical meristem (FAP). In flowers, observed in petals and anthers, particularly in anther filaments.
messages: Homodimer.
messages: Secreted
messages: Specifically expressed in flowers.

3702:AT5G25050
gene id: 3702:AT5G25050
uniprot id: Q5FV41
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Folate-biopterin transporter (TC 2.A.71) family.
messages: Could mediate folate transport.
messages: Membrane

3702:AT3G13445
gene id: 3702:AT3G13445
uniprot id: A0A384KWS0
uniprot id: A0A5S9XBZ5
uniprot id: F4JDC0
uniprot id: P28147
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TBP family.
messages: Belongs to the TFIID complex together with the TBP-associated factors (TAFs) (PubMed:7675079). Binds DNA as monomer. Interacts with TAF1 (via N-terminus) (PubMed:17340043). Interacts with MEE12/CCG1 (PubMed:26462908). Associates with PWP2 in the nucleus (PubMed:19929880). Component of a nuclear protein complex containing at least TATA binding proteins (TBPs, e.g. TBP1 and TBP2) and ATX1 (PubMed:21266657).
messages: General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G61350
gene id: 3702:AT5G61350
uniprot id: Q9FLJ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT4G38090
gene id: 3702:AT4G38090
uniprot id: A0A178UZY7
uniprot id: B3H5Q9
uniprot id: B9DG41
uniprot id: Q84WL1
names: Similarity
messages: Belongs to the IMPACT family.

3702:AT5G09750
gene id: 3702:AT5G09750
uniprot id: Q9LXD8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the developing septum, transmitting tract and stigma.
messages: Gynoecium.
messages: Homodimer (Probable). Interacts with SPT.
messages: Impaired pollen tube growth.
messages: Negatively regulated by ARF3/ETT in the abaxial gynoecium.
messages: Nucleus
messages: Required for the female reproductive tract development and fertility.

3702:AT5G60160
gene id: 3702:AT5G60160
uniprot id: A0A178ULL0
uniprot id: Q9LST0
names: Similarity
messages: Belongs to the peptidase M18 family.

3702:AT2G34630
gene id: 3702:AT2G34630
uniprot id: A0A178VT82
uniprot id: Q5HZ00
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Embryo lethal.
messages: Homodimer.
messages: May be involved in the supply of solanesyl diphosphate for ubiquinone-9 (UQ-9) biosynthesis in mitochondria (PubMed:21950843). Synthesizes C25 to C45 medium / long-chain products depending on the type of substrate available (PubMed:21220764). Can use geranyl diphosphate, farnesyl diphosphate or geranylgeranyl diphosphate as substrates, but not dimethylallyl diphosphate (PubMed:11069698, PubMed:17877699, PubMed:21220764).
messages: Mitochondrion
messages: Silencing of At2g34630 decreases ubiquinone-9 biosynthesis (UQ-9) in mitochondria but has no effect on plastoquinone-9 (PQ-9) biosynthesis in chloroplast, and maybe due to the redundancy with At1g17050.
messages: Ubiquitous. Highest expression in seeds and shoot apical meristem.
messages: Was proposed to be a geranyl diphosphate synthase involved in gibberellins biosynthesis.
messages: chloroplast

3702:AT5G65310
gene id: 3702:AT5G65310
uniprot id: F4KHX1
uniprot id: P46667
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Down-regulated by abscisic acid (ABA) and by salt stress.
messages: Interacts with DNA as homodimer.
messages: Localized primarily to the hypocotyl of germinating seedlings.
messages: Nucleus
messages: Probable transcription factor that acts as a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. Binds to the DNA sequence 5'-CAATNATTG-3'.
messages: Transcription factor.
messages: Widely expressed.

3702:AT3G18030
gene id: 3702:AT3G18030
uniprot id: Q9SWE5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the HFCD (homooligomeric flavin containing Cys decarboxylase) superfamily.
messages: Binds 1 FMN per subunit.
messages: Expressed in roots, shoots, leaves, flowers, developing siliques and seeds with highest expression in seed embryos and phloem.
messages: Homotrimer.
messages: Induced by salt stress.
messages: Involved in plant growth, and salt and osmotic tolerance (PubMed:10652125). Catalyzes the decarboxylation of 4'-phosphopantothenoylcysteine to 4'-phosphopantetheine, a key step in coenzyme A biosynthesis (PubMed:11279129, PubMed:11923307, PubMed:12860978, PubMed:16415216). The enzyme is also able to decarboxylate pantothenoylcysteine to pantothenoylcysteamine (PubMed:11923307).
messages: No visible phenotype under normal growth conditions, but homozygous double mutants hal3a-1 and hal3b are embryonic lethal.

3702:AT4G22580
gene id: 3702:AT4G22580
uniprot id: Q9SUW1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Expressed in roots, hypocotyls, cotyledons, leaves, stems, stamens and pollen grains.
messages: Functions in xyloglucan synthesis by adding side chains to the xylosylated glucan backbone. Involved in the galactosylation of hemicellulose xyloglucan.
messages: Golgi apparatus membrane

3702:AT5G27120
gene id: 3702:AT5G27120
uniprot id: O04658
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NOP5/NOP56 family.
messages: Required for 60S ribosomal subunit biogenesis.
messages: nucleolus

3702:AT1G18040
gene id: 3702:AT1G18040
uniprot id: A0A178WHV0
uniprot id: Q9LMT0
names: Activity Regulation
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by phosphorylation by CDKF-1.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Expressed in roots, shoots and suspension cell culture.
messages: Interacts with CYCH1-1. Binding to CYCH1-1 activates CDK kinase.
messages: May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.
messages: Nucleus
messages: Phosphorylated by CDKF-1 at Ser-161 and Thr-167. Phosphorylated at Tyr-23 by WEE1. Autophosphorylated.

3702:AT1G66570
gene id: 3702:AT1G66570
uniprot id: F4IEW7
uniprot id: Q2V4E7
uniprot id: Q67YF8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.
messages: Cell membrane
messages: Expressed in anthers.
messages: May be responsible for the transport of glucosides into the cell, with the concomitant uptake of protons (symport system). Does not seem to transport sucrose.

3702:AT1G61065
gene id: 3702:AT1G61065
uniprot id: Q8W576
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DESIGUAL family.
messages: Membrane

3702:AT3G03580
gene id: 3702:AT3G03580
uniprot id: Q9SS60
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT2G29410
gene id: 3702:AT2G29410
uniprot id: Q6DBM8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
messages: Involved in sequestration of excess zinc in the cytoplasm into vacuoles to maintain zinc homeostasis.
messages: Vacuole membrane

3702:AT1G48930
gene id: 3702:AT1G48930
uniprot id: A0A654EGX5
uniprot id: Q9M995
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 9 (cellulase E) family.
messages: Secreted

3702:AT1G19450
gene id: 3702:AT1G19450
uniprot id: A0A654EG97
uniprot id: Q93YP9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane
messages: Sugar transporter.

3702:AT3G62940
gene id: 3702:AT3G62940
uniprot id: A0A384K877
uniprot id: Q9LYC7
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
messages: Altered DNA methylation of root hair-related genes and altered phosphate (Pi)-responsive root traits (PubMed:29061907). Abnormal responses upon Pi starvation leading to the formation of very short root hairs instead of increased lateral root formation and increased root hair length (PubMed:29061907). On low-Pi media, altered H3K4 and H3K27 trimethylation levels at the transcriptional start site of a subset of genes encoding key players in Pi homeostasis thus leading to a reduced transcription of these genes (PubMed:29061907, PubMed:29301952). Under Pi-replete conditions, constitutive Pi deficiency root phenotype such as attenuated primary root growth associated with increased root hairs development (PubMed:29061907, PubMed:29301952). Accumulation of proteins involved in chromatin remodeling and altered distribution of reactive oxygen species along the root (PubMed:29301952).
messages: Belongs to the peptidase C85 family.
messages: Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (Probable). Inactive cysteine protease (PubMed:24659992). Deubiquitinating enzyme which regulates gene expression by contributing to chromatin organization and DNA methylation patterns (e.g. H3K4me3 and H3K27me3) (PubMed:29061907). Involved in the interpretation of environmental information, probably by altering chromatin organization and maintaining redox homeostasis (PubMed:29301952). Required for phosphate (Pi) homeostasis (e.g. responses upon Pi starvation including DNA methylation and histone methylation) (PubMed:29061907, PubMed:29301952). Negative regulator of root hair morphogenesis (PubMed:29301952).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G28930
gene id: 3702:AT3G28930
uniprot id: A0A1I9LNH9
uniprot id: A0A5S9XGM9
uniprot id: P54121
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the gamma-glutamylcyclotransferase family.
messages: Peak of expression around the time of early inflorescence.
messages: Putative gamma-glutamylcyclotransferase.
messages: Ubiquitous.
messages: Up-regulated early after infection with P.syringae carrying avrRpt2 (PubMed:8742710). Expressed constitutively (PubMed:18214976).

3702:AT4G32350
gene id: 3702:AT4G32350
uniprot id: A0A1P8B4K6
uniprot id: A0A654FUT9
uniprot id: Q8RXT2
names: Similarity
messages: Belongs to the IST1 family.

3702:AT5G02180
gene id: 3702:AT5G02180
uniprot id: Q8GYS4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.5) subfamily.
messages: Membrane

3702:AT3G02550
gene id: 3702:AT3G02550
uniprot id: Q9M886
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in young shoots, roots, stems, leaves and flowers.

3702:AT1G17990
gene id: 3702:AT1G17990
uniprot id: A0A654EBL8
uniprot id: F4I949
uniprot id: P0DI08
uniprot id: P0DI09
names: Function
names: Similarity
messages: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.
messages: Putative oxophytodienoate reductase that may be involved in the biosynthesis or metabolism of oxylipin signaling molecules.

3702:AT1G80750
gene id: 3702:AT1G80750
uniprot id: A0A384KGQ9
uniprot id: Q0WU42
uniprot id: Q9SAI5
names: Similarity
messages: Belongs to the universal ribosomal protein uL30 family.

3702:AT1G36340
gene id: 3702:AT1G36340
uniprot id: Q9C8X7
names: Function
names: Induction
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: By biotic stresses.

3702:AT4G35350
gene id: 3702:AT4G35350
uniprot id: A0A178UWD3
uniprot id: F4JN02
uniprot id: O65493
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Autocleaves.
messages: Belongs to the peptidase C1 family.
messages: Cell membrane
messages: Cysteine protease involved in xylem tracheary element (TE) autolysis during xylogenesis in roots. Participates in micro autolysis within the intact central vacuole before mega autolysis is initiated by tonoplast implosion.
messages: Mostly expressed in roots, stems and flowers. Confined to tracheary elements, and specifically to xylem.
messages: Vacuole

3702:AT2G01960
gene id: 3702:AT2G01960
uniprot id: Q58G33
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tetraspanin (TM4SF) family.
messages: May be involved in the regulation of cell differentiation.
messages: Membrane

3702:AT1G75990
gene id: 3702:AT1G75990
uniprot id: Q9LQR8
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the proteasome subunit S3 family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively (PubMed:14623884, PubMed:20516081). Interacts with UCH1 and UCH2 (PubMed:22951400).
messages: Preferentially expressed in flowers.

3702:AT3G17680
gene id: 3702:AT3G17680
uniprot id: A0A384LIH5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G42510
gene id: 3702:AT5G42510
uniprot id: A0A654G7F0
uniprot id: Q9FIG6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the plant dirigent protein family.
messages: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
messages: Homodimer.
messages: apoplast

3702:AT1G50590
gene id: 3702:AT1G50590
uniprot id: A0A1P8AVL1
uniprot id: Q9LPS9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pirin family.
messages: Nucleus

3702:AT3G51270
gene id: 3702:AT3G51270
uniprot id: F4J3A9
uniprot id: F4J3B0
names: Similarity
messages: Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.

3702:AT4G28470
gene id: 3702:AT4G28470
uniprot id: Q6XJG8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Belongs to the proteasome subunit S2 family.
messages: Component of the 19S regulatory particle (RP/PA700) base subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Detected in the entire flower with strong signals in carpels, especially in differentiating ovules and the carpel wall. Patchy localization with strong levels in particular cells. In anthers, present at a high level in tetrads of microspores and the tapetum. After fertilization, mostly observed in the embryo up to the heart stage and in the chalazal endospem. Expressed at high levels in silique wall at all stages of carpel development.
messages: Expressed in stems, leaves, buds, flowers, siliques and developing seeds.
messages: Normal phenotype.
messages: Ubiquitinated.

3702:AT2G18460
gene id: 3702:AT2G18460
uniprot id: F4IQJ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant COV1 protein family.
messages: Membrane

3702:AT1G63810
gene id: 3702:AT1G63810
uniprot id: Q0WVM5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NRAP family.
messages: nucleolus

3702:AT1G59580
gene id: 3702:AT1G59580
uniprot id: A0A178WBY0
uniprot id: Q39022
names: Activity Regulation
names: Domain
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-191 and Tyr-193, which activates the enzyme (By similarity). Phosphorylated on Ser residue.
messages: Highest levels in the stem. Present in the leaf, root and flower, but not in seeds.
messages: Interacts with MKK3.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT5G64760
gene id: 3702:AT5G64760
uniprot id: A0A1P8BHB1
uniprot id: F4KF39
uniprot id: Q8VWK0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins (By similarity). Acts redundantly with RPN5A.
messages: Belongs to the proteasome subunit p55 family.
messages: Component of the 19S regulatory particle (RP/PA700) lid subcomplex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The RP/PA700 complex is composed of at least 17 different subunits in two subcomplexes, the base and the lid, which form the portions proximal and distal to the 20S proteolytic core, respectively.
messages: Cytoplasm
messages: No visible phenotype.
messages: Nucleus
messages: Ubiquitous with highest expression in flowers.

3702:AT5G51360
gene id: 3702:AT5G51360
uniprot id: A0A178UJG6
uniprot id: Q9FGN5
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G27380
gene id: 3702:AT1G27380
uniprot id: A0A178WC56
uniprot id: A0A384KSI6
uniprot id: Q8GYU0
names: Caution
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in roots, leaves, stems, flowers, siliques and pollen.
messages: Functions as downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Is involved in pollen tube growth regulation through its interaction with ARAC11/ROP1.
messages: Interacts with ARAC11/ROP1.
messages: Over-expression of RIC2 in tobacco germinating pollen reduces pollen tube elongation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G03600
gene id: 3702:AT3G03600
uniprot id: A0A384L231
uniprot id: Q0WU50
uniprot id: Q9GCB9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS2 family.
messages: Mitochondrion

3702:AT3G10986
gene id: 3702:AT3G10986
uniprot id: B3H5L1
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

3702:AT5G50440
gene id: 3702:AT5G50440
uniprot id: Q541Y1
uniprot id: Q9FK28
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GOSR2 family.
messages: Golgi apparatus membrane
messages: Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
messages: Membrane

3702:AT4G30090
gene id: 3702:AT4G30090
uniprot id: A0A178UXP5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G25570
gene id: 3702:AT3G25570
uniprot id: A0A7G2EQF7
uniprot id: Q9LSU6
names: Cofactor
names: Function
names: PTM
names: Similarity
messages: Belongs to the eukaryotic AdoMetDC family.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Essential for biosynthesis of the polyamines spermidine and spermine. Essential for polyamine homeostasis, and normal plant embryogenesis, growth and development.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain.

3702:AT1G11925
gene id: 3702:AT1G11925
uniprot id: O65387
names: Similarity
messages: Belongs to the STIG1 family.

3702:AT1G80380
gene id: 3702:AT1G80380
uniprot id: Q944I4
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GLYK kinase family.
messages: Catalyzes the concluding reaction of the photorespiratory C2 cycle, an indispensable ancillary metabolic pathway to the photosynthetic C3 cycle that enables land plants to grow in an oxygen-containing atmosphere.
messages: Cytoplasm
messages: Cytoplasmic D-glycerate 3-kinase that constitutes a photorespiratory bypass that alleviates fluctuating light-induced photoinhibition (PubMed:29129375).
messages: Expressed in the dark.
messages: Expressed in the light.
messages: Isoform 1: Expressed in the light (PubMed:29129375). Isoform 3: Expressed in the dark (PubMed:29129375).
messages: chloroplast

3702:AT3G53480
gene id: 3702:AT3G53480
uniprot id: Q9LFH0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
messages: Cell membrane
messages: Defects in efflux of the auxin precursor indole-3-butyric acid (IBA) associated with developmental defects such as abnormally long root hairs and increased lateral root production (PubMed:20498067). Strongly reduced coumarin (e.g. highly oxygenated compounds scopoletin, dihydroxyscopoletin, esculetin, fraxin, fraxetin and esculin) exudation in the rhizosphere, especially in iron (Fe) deficient conditions (PubMed:28623273, PubMed:24015802). Hypersensitivity to iron (Fe) deficiency (PubMed:24015802). Increased sensitivity to the auxinic herbicides 2,4-dichlorophenoxyacetic acid (2,4-D), 4-(2,4-dichlorophenoxy)butyric acid (2,4-DB) and 2-naphthoxyacetic acid (2-NOA), but normal responses to the endogenous auxins indole-3-acetic acid (IAA), phenylacetic acid (PAA) and indole-butyric acid (IBA) (PubMed:16877699, PubMed:20498067). Hypersensitivity to polar auxin transport inhibitors including napthylphthalamic acid (NPA), 1-naphthoxyacetic acid (1-NOA), 2-(1-pyrenoyl)benzoic acid (PBA) and 2,3,5-triiodobenzoic acid (TIBA) (PubMed:16877699, PubMed:20498067).
messages: Expressed in roots and, to a lower extent, in seedlings.
messages: In roots, mostly expressed in the cells of the lateral root cap and epidermal cells at the root tip (PubMed:16877699, PubMed:20498067). In shoots, confined to the stipules (PubMed:16877699).
messages: Induced by cycloheximide (CHX) and cold/dark treatment (PubMed:12430018). Up-regulated in response to iron (Fe) deficiency (PubMed:24015802).
messages: Together with ABCG36, regulates auxin homeostasis and responses by playing a dual role in coumarine (and derivatives) and in the auxin precursor indole 3-butyric acid (IBA) efflux transport, thus influencing roots and root hairs development (PubMed:24015802, PubMed:20498067). Mediates coumarin exudation in the rhizosphere, especially in iron (Fe) deficient conditions, with a strong specificity for highly oxygenated compounds such as scopoletin and derivatives, dihydroxyscopoletin, esculetin, fraxin, fraxetin and esculin; these molecules improve plant Fe nutrition (PubMed:28623273, PubMed:26517905, PubMed:24015802). Involved in the cellular detoxification of xenobiotics by promoting the excretion of some auxinic herbicides including 2,4-dichlorophenoxyacetic acid (2,4-D), 4-(2,4-dichlorophenoxy)butyric acid (2,4-DB) and other members of the phenoxyalkanoic acid family as well as the polar auxin transport inhibitor, napthylphthalamic acid (NPA) (PubMed:24015802, PubMed:16877699, PubMed:20498067). May be a general defense protein (By similarity).

3702:AT5G08690
gene id: 3702:AT5G08690
uniprot id: A0A178UQU4
uniprot id: P83483
uniprot id: P83484
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c (By similarity).
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Membrane
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.
messages: Mitochondrion
messages: Mitochondrion inner membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

3702:AT5G09950
gene id: 3702:AT5G09950
uniprot id: A0A1P8BCH0
uniprot id: Q9FIB2
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT2G19210
gene id: 3702:AT2G19210
uniprot id: O65924
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G71060
gene id: 3702:AT1G71060
uniprot id: Q9C9A2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G54900
gene id: 3702:AT5G54900
uniprot id: Q9FPJ8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the polyadenylate-binding RBP45 family.
messages: By ozone-induced oxidative stress.
messages: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation.
messages: Interacts with the poly(A) tail of mRNA in nucleus.
messages: Mostly expressed in seedlings, and, to a lower extent, in leaves, stems, and flowers. Present in immature anther tissues (tapetum cells) and mature pollen grains.
messages: Nucleus

3702:AT5G66910
gene id: 3702:AT5G66910
uniprot id: Q9FKZ0
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT1G66530
gene id: 3702:AT1G66530
uniprot id: A0A654ELJ2
uniprot id: Q9C713
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis.
messages: No visible phenotype under normal growth conditions.
messages: cytosol

3702:AT4G35020
gene id: 3702:AT4G35020
uniprot id: A0A1P8B372
uniprot id: A0A384KTR9
uniprot id: Q38912
uniprot id: Q5PNX9
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: An article reported S-acylation of Cys residues that regulates localization to membranes; however, this paper was later retracted.
messages: Belongs to the small GTPase superfamily. Rho family.
messages: Cell membrane
messages: Cytoplasm
messages: Fewer and shorter root hairs.
messages: In root trichoblasts, accumulates into patches at the basal end of the cell before a hair bulge is visible and remain concentrated at the tip of the bulge and in the growing hair.
messages: Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation. Involved in cell polarity control during the actin-dependent tip growth of root hairs, thus regulating root hair length and root hair initiation (PubMed:11387211, PubMed:30770391). SPK1-dependent activation is required for auxin-mediated inhibition of PIN2 internalization during gravitropic responses (PubMed:22683260).
messages: Interacts with Rho GDP-dissociation inhibitor 1 and ICR1 (PubMed:10798620, PubMed:17493810). Binds to SPK1 when in the inactive GDP-bound form (PubMed:22683260).
messages: Ubiquitous. Preferentially expressed at the tip of root hairs.

3702:AT1G30600
gene id: 3702:AT1G30600
uniprot id: A0A178W4M2
uniprot id: Q9SA75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT1G51230
gene id: 3702:AT1G51230
uniprot id: A0A654EHI3
uniprot id: Q3ECS8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G11400
gene id: 3702:AT4G11400
uniprot id: Q9LDD4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G01580
gene id: 3702:AT3G01580
uniprot id: Q9SS97
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G61760
gene id: 3702:AT1G61760
uniprot id: Q9SYB2
names: Subcellular Location Annotation
messages: Membrane

3702:AT4G03115
gene id: 3702:AT4G03115
uniprot id: A0A1P8B797
uniprot id: A0A1P8B7A0
uniprot id: A0A1P8B7A1
uniprot id: A0A1P8B7B9
uniprot id: A0A654FLS8
uniprot id: A0A7G2EZR5
uniprot id: F4JI50
uniprot id: Q0WQ88
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT2G20540
gene id: 3702:AT2G20540
uniprot id: Q9SIL5
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT1G16210
gene id: 3702:AT1G16210
uniprot id: A0A654EL43
uniprot id: Q8VYC9
names: Similarity
messages: Belongs to the CCDC124 family.

3702:AT3G09910
gene id: 3702:AT3G09910
uniprot id: Q9SF92
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT5G09370
gene id: 3702:AT5G09370
uniprot id: A0A178U9K1
uniprot id: A0A178UCG3
uniprot id: A0A1P8BAC8
uniprot id: Q9FY78
names: Caution
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Confined to the ovaries of the inflorescence.
messages: Has no GPI-anchor.
messages: Membrane
messages: Probable lipid transfer protein.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G47160
gene id: 3702:AT5G47160
uniprot id: A0A178UMA6
uniprot id: Q9LVU3
names: Caution
names: Subcellular Location Annotation
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G02270
gene id: 3702:AT4G02270
uniprot id: O81417
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in root hairs within five days under phosphate (Pi) deficient conditions (at protein level).
messages: Belongs to the plant proline-rich protein superfamily.
messages: Contributes to cell wall structure in root hairs and seeds, especially in phosphate (Pi) deprivation conditions or in the presence of ethylene (PubMed:28138059, PubMed:28837399). Particularly important in maternal tissues (pericarps and seed coats) during seed development, especially under stress conditions (PubMed:28138059, PubMed:30673938). Confers thermotolerance in seed germination rate (PubMed:30673938).
messages: In roots, observed in root tips and elongating regions of the primary and lateral roots, especially in root hairs and collet hairs (PubMed:28138059). In reproductive organs, present in fruits and anthers (mostly in young anthers) (PubMed:28138059). Later detected in the pericarps and receptacles during maturation of siliques (PubMed:28138059). In siliques, expressed in the embryo (from the initial globular to mature stages), funiculus and seed coat (in the transparent inner integument) (PubMed:28138059). Expression levels are coordinated with root hair cell elongation (PubMed:28837399).
messages: No visible phenotype under normal conditions (PubMed:28138059). Short and abnormally shaped root hairs due to the suppression of cell growth and cell death, and withered seeds, both having a tendency to necrotize and thick cell walls with abnormal structure in phosphate (Pi) deficient conditions or after ethylene treatment (PubMed:28138059, PubMed:28837399). Production of dark brown shrunken seeds unable to germinate, especially in low humidity (PubMed:30673938).
messages: Root hair and seed specific expression (PubMed:19448035, PubMed:28138059, PubMed:28837399). Also observed in other tissues including siliques, roots and flowers (PubMed:28138059, PubMed:28837399).
messages: cell wall

3702:AT2G47330
gene id: 3702:AT2G47330
uniprot id: O22907
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT2G04520
gene id: 3702:AT2G04520
uniprot id: A0A178VW73
uniprot id: Q9SJB9
names: Function
names: Similarity
messages: Belongs to the eIF-1A family.
messages: Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.

3702:AT2G39540
gene id: 3702:AT2G39540
uniprot id: A0A5S9X5J0
uniprot id: O80641
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GASA family.
messages: Expressed in roots and developing seeds.
messages: Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.
messages: Secreted
messages: Six disulfide bonds may be present.

3702:AT3G57280
gene id: 3702:AT3G57280
uniprot id: A0A178VHH9
uniprot id: Q93V66
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TMEM14 family.
messages: Expressed at all developmental stages, with a peak at early pollen development.
messages: Expressed in cotyledons, leaves, sepals and pollen.
messages: For all TMEM14 proteins, 4 hydrophobic alpha-helical domains are predicted. However, NMR structure determination of the human TMEM14A showed that only 3 of these helices are membrane-spaning while the amphiphilic N-terminal helix is probably located at the lipid micelle-water interface.
messages: Mediates the export of free fatty acid from the plastids. Potentially prefers palmitic acid (C16:0) over oleic acid (C18:1) and stearic acid (C18:0). Not involved in fatty acid activation. Required for biogenesis of the outer pollen cell wall, in particular for the assembly of exine and pollen coat and for the release of ketone wax components.
messages: Membrane
messages: Reduced biomass and male sterility. Reduced size, thinner inflorescence stalks and flowers producing short siliques containing almost no seeds. Small vascular bundles with reduced secondary cell walls and modified cuticular wax composition with strongly reduced content in C29-ketone wax components.
messages: Up-regulated upon induction of early leaf senescence.
messages: chloroplast inner membrane

3702:AT3G63030
gene id: 3702:AT3G63030
uniprot id: A0A178VBW3
uniprot id: Q9LYB9
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in rosette leaves, buds, flowers, stems, mature seeds and roots.
messages: Nucleus
messages: The methyl-CpG-binding domain (MBD) functions both in binding to methylated DNA and in protein interactions.
messages: Transcriptional regulator that binds CpG, CpNpN and CpNpG (N is A, T, or C) islands in promoters regardless the DNA methylation status. Plays probably a role in gene silencing.

3702:AT4G20380
gene id: 3702:AT4G20380
uniprot id: A0A178V3Z8
uniprot id: A0A178V4C0
uniprot id: A0A1P8B450
uniprot id: F4JUW0
uniprot id: P94077
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By methyl viologen.
messages: Cytoplasm
messages: Expressed in cotyledons, roots, rosette leaves, stems, inflorescences and flowers.
messages: Interacts with BZIP10 and AMC1 (via N-terminus). Binds to BZIP63. Interacts with CAT1, CAT2 and CAT3 in a zinc-finger-dependent manner (PubMed:23958864). Interacts (via N-terminus) with GILP (PubMed:21526181).
messages: Intron retention.
messages: Negative regulator of reactive oxygen-induced cell death, cold stress-induced cell death, pathogen-induced hypersensitive response (HR), basal disease resistance. May be involved in the induction of the copper/zinc superoxide dismutase CSD1 and CSD2 that detoxify accumulating superoxide before the reactive oxygen species (ROS) can trigger a cell death cascade. LSD1 and LOL1 have antagonistic effects on CSD1 and CSD2 accumulation to regulate oxidative stress-induced cell death. Antagonizes the function of BZIP10, a positive regulator of cell death, by interacting in the cytoplasm and preventing its nuclear localization. Controls lysigenous aerenchyma in hypocotyls under root hypoxia. Required for leaf acclimation in response to excess excitation energy.
messages: No visible phenotype under normal growth condition, however cold treatment induces the development of yellowish leaves with necrosis, and treatment with salicylic acid or infection with avirulent pathogen causes a runaway cell death and plant death.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: When expressed in Arabidopsis, Pisum sativa LSD1 interacts with importin alpha via the LSD1-type zinc finger motifs, suggesting that the nuclear import of LSD1 may rely on the interaction between its zinc finger motifs and importin alpha.

3702:AT3G61520
gene id: 3702:AT3G61520
uniprot id: Q9M316
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G45690
gene id: 3702:AT5G45690
uniprot id: A0A178U7K1
uniprot id: Q941A4
names: Similarity
messages: Belongs to the OBAP family.

3702:AT1G04590
gene id: 3702:AT1G04590
uniprot id: A0A178WAM9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G27320
gene id: 3702:AT5G27320
uniprot id: A0A178UKX0
uniprot id: Q940G6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Functions as soluble gibberellin (GA) receptor. GA is an essential hormone that regulates growth and development in plants. Binds with high affinity the biologically active gibberellin GA4, but has no affinity for the biologically inactive GAs. In response to GA, interacts with specific DELLA proteins, known as repressors of GA-induced growth, and targets them for degradation via proteasome. Seems to be required for GA signaling that controls root growth, seed germination and stem elongation. Partially redundant with GID1A and GID1B.
messages: Interacts with the DELLA proteins GAI, RGA, RGL1, RGL2 and RGL3 in a GA-dependent manner.
messages: No visible phenotype under normal growth condition.
messages: Nucleus
messages: Widely expressed.

3702:AT4G10390
gene id: 3702:AT4G10390
uniprot id: A0A178UUB9
uniprot id: Q9SV83
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT2G34570
gene id: 3702:AT2G34570
uniprot id: Q8L8C2
names: Subcellular Location Annotation
messages: nucleolus

3702:AT1G09420
gene id: 3702:AT1G09420
uniprot id: F4I0Y8
uniprot id: Q0WPI4
uniprot id: Q93ZW0
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glucose-6-phosphate dehydrogenase family.
messages: Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
messages: Expressed in leaves, stems and buds.
messages: Forms homodimer (By similarity). Interacts with G6PD1 (PubMed:21309870).
messages: Seems to be a catalytically inactive enzyme.
messages: There are 6 glucose-6-phosphate 1-dehydrogenase genes in A.thaliana.
messages: chloroplast stroma

3702:AT5G15770
gene id: 3702:AT5G15770
uniprot id: A0A178U7Q6
uniprot id: Q9LFU9
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acetyltransferase involved in UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthesis. UDP-GlcNAc is an essential metabolite that serves as an initial sugar donor for N-glycan synthesis and thus plays an important role in protein and lipid glycosylation.
messages: Belongs to the acetyltransferase family. GNA1 subfamily.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems, cauline leaves, flowers and siliques.
messages: Homodimer.
messages: Retarded vegetative growth, delayed flowering and short and thick inflorescence stems and siliques.
messages: The mutant lignescens (lig) was originally isolated as a temperature-sensitive mutant that exhibits ectopic lignin deposition and growth defects under high-temperature conditions.

3702:AT1G70220
gene id: 3702:AT1G70220
uniprot id: A0A1P8AWW8
uniprot id: F4I5D2
names: Similarity
messages: Belongs to the LSM12 family.

3702:AT1G62990
gene id: 3702:AT1G62990
uniprot id: Q9FPQ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TALE/KNOX homeobox family.
messages: May be involved in secondary cell wall biosynthesis.
messages: May form heterodimeric complex with the TALE/BELL proteins (By similarity). Interacts with OFP1, OFP2, OFP3, OFP4 and OFP6.
messages: Nucleus

3702:AT5G37260
gene id: 3702:AT5G37260
uniprot id: F4K5X6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
messages: Circadian-regulation. Peak of transcript abundance near subjective dawn. Up-regulated transiently by light.
messages: No effect on the regulation of core clock associated genes or on the hypocotyl length, but hypersensitivity to freezing stress and slightly earlier-flowering phenotype. Rve1 and rve2 double mutant has no alteration in the period or phase of the clock. Rve1, rve2 and rve7 triple mutant has no alteration in the period or phase of the clock.
messages: Nucleus
messages: Positive regulator for cold-responsive gene expression and cold tolerance. Part of a regulatory feedback loop that controls a subset of the circadian outputs and modulates the central oscillator. Negatively self-regulates its own expression.
messages: Regulated at the level of mRNA maturation by RH42 (PubMed:23371945). The RVE2 pre-mRNA can be alternatively spliced, generating a poison cassette exon that harbors an very early in-frame premature termination codon. The resulting severely truncated mRNA is not efficiently translated (PubMed:22747664).

3702:AT4G38140
gene id: 3702:AT4G38140
uniprot id: Q9SZL4
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G31140
gene id: 3702:AT1G31140
uniprot id: A0A178W639
uniprot id: Q9SA07
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in bud pedicels, petals, anthers, style, ovary, seeds and embryos.
messages: Forms homodimer (PubMed:20598091). Interacts with AGL16 (PubMed:20598091).
messages: Nucleus
messages: Plants over-expressing AGL63 are dwarf, have few rosette leaves with a curly-leaf phenotype, and display small disorganized floral structures and addition of carpel-like, resulting in small abnormal siliques with few seed production.
messages: Probable transcription factor involved in the regulation of fruit growth. Contributes to integument development. Controls organ size via cell expansion (PubMed:20088901). Involved in the regulation of longitudinal growth of the fruit evenly throughout the radial axis (PubMed:20598091). Functions redundantly with TT16/AGL32 to repress nucellus growth and promote its degeneration (PubMed:27233529).

3702:AT4G15300
gene id: 3702:AT4G15300
uniprot id: A0A1P8B5L1
uniprot id: A0A1P8B5L5
uniprot id: O23384
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT1G49410
gene id: 3702:AT1G49410
uniprot id: Q9XIA7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: A component of the complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins.
messages: Belongs to the Tom6 family.
messages: Expressed in roots, flowers, young cotyledons and leaves.
messages: Forms part of the receptor complex that consists of at least 6 different proteins (TOM5, TOM6, TOM7, TOM20, TOM22/TOM9 and TOM40).
messages: Mitochondrion outer membrane

3702:AT1G35240
gene id: 3702:AT1G35240
uniprot id: A0A2H1ZEC0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Nucleus

3702:AT5G47850
gene id: 3702:AT5G47850
uniprot id: Q9FIJ6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Expressed in roots, leaves, especially in trichomes, shoot apical meristems (SAM), and, to a lower extent, in floral buds.
messages: Homodimer.
messages: Membrane

3702:AT2G40840
gene id: 3702:AT2G40840
uniprot id: Q8RXD9
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the disproportionating enzyme family.
messages: Circadian-regulation with a peak in expression in the middle of the light period.
messages: Cytosolic alpha-glucanotransferase essential for the cytosolic metabolism of maltose, an intermediate on the pathway by which starch is converted to sucrose in leaves at night. Metabolizes maltose exported from the chloroplast and is specific for beta-maltose. May play a role in freezing tolerance. Temperature drop induces inactivation of DPE2 that leads to rapid accumulation of maltose, a solute that protects cells from freezing damage.
messages: Dwarf plants with yellowish leaves that accumulate large amounts of maltose. Increased tolerance to cold.
messages: Inactivated in response to cold stress.
messages: cytosol

3702:AT1G07610
gene id: 3702:AT1G07610
uniprot id: Q38804
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the metallothionein superfamily. Type 15 family.
messages: Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Confers tolerance to cadmium (Cd) and plays a role in Cd and zinc (Zn) homeostasis (PubMed:16240177).
messages: Widely expressed at low levels.

3702:AT1G06120
gene id: 3702:AT1G06120
uniprot id: A0A178W3X7
uniprot id: Q9FPD5
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The histidine box domains are involved in binding the catalytic metal ions.
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.

3702:AT4G35910
gene id: 3702:AT4G35910
uniprot id: A0A7G2F8I6
uniprot id: O65628
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CTU2/NCS2 family.
messages: Cytoplasm
messages: Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.

3702:AT1G17530
gene id: 3702:AT1G17530
uniprot id: A0A178W8Y1
uniprot id: A0A1P8AV91
uniprot id: Q9LNQ1
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Tim17/Tim22/Tim23 family.
messages: Component of the TIM17:23 complex at least composed of TIM23, TIM17 and TIM50. The complex interacts with the TIM44 component of the PAM complex (By similarity).
messages: Essential component of the TIM17:23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. Links the inner and outer membranes (By similarity).
messages: Expressed in roots, flowers, cotyledons and leaves.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Peak of expression during cotyledon development.

3702:AT3G03730
gene id: 3702:AT3G03730
uniprot id: Q9SRV0
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: Abolished brassinosteroid (BR)-induced ASK7/BIN2/SK21 degradation, and BR-insensitivity. Suppression of the constitutive BR-response phenotype in the dominant mutant bzr1-1D, and accumulation of phosphorylated BZR1.
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Required for brassinosteroid (BR) signal transduction. Mediates ASK7/BIN2/SK21 inactivation both by competing with substrate binding (e.g. BZR1) and by promoting its ubiquitination and subsequent proteasomal degradation.
messages: Cytoplasm
messages: nucleolus

3702:AT5G36950
gene id: 3702:AT5G36950
uniprot id: A0A654G5J2
uniprot id: Q9FIV6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S1C family.
messages: Mitochondrion matrix
messages: Probable serine protease.

3702:AT5G67270
gene id: 3702:AT5G67270
uniprot id: A0A178UNG3
uniprot id: Q9FGQ6
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the MAPRE family.
messages: Composed of two functionally independent domains. The N-terminal domain forms a hydrophobic cleft involved in microtubule binding and the C-terminal is involved in protein binding. In Arabidopsis thaliana, EB1A and EB1B possess an acidic C-terminal tail that has autoinhibitory function, but EB1C has a tail region with patches of basic amino acid residues required for nuclear targeting.
messages: Highly expressed in the root and shoot meristems, in guard cells of leaf stomata, pollen grains and pollen tubes.
messages: Homodimer.
messages: No visible phenotype under normal growth conditions, but seedlings show increased sensitivity to oryzalin, a microtubule-destabilizing agent. conditions.
messages: Nucleus
messages: Plant microtubules behave differently from those of other eukaryotes in mitosis: they lack centrosomes and spindles are barrel-shaped with unfocused poles and no astral microtubules.
messages: Plant-specific EB1 subtype that functions preferentially at early stages of plant mitosis by regulating spindle positioning and chromosome segregation. Accumulates in the prophase nucleus and is required to maintain spindle bipolarity during premetaphase and/or metaphase and for efficient segregation of chromosomes at anaphase. May play a role in the dynamics of microtubule network in elongating pollen tubes.
messages: phragmoplast
messages: spindle

3702:AT1G22730
gene id: 3702:AT1G22730
uniprot id: A0A178WLK3
uniprot id: O80548
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PDCD4 family.
messages: Binds to EIF4A1 (PubMed:29084871). The association with ribosomes is modulated by cellular energy status and TOR activity (PubMed:29084871).
messages: Increased susceptibility to dark and starvation, and to treatment with the TOR inhibitor (PubMed:29084871). Decreased translation activity associated with altered ribosome patterns, especially in the dark and starvation conditions, in which mRNAs distribution is altered and rRNA abnormally degraded (PubMed:29084871). Slightly early flowering time under long-day conditions (PubMed:29084871).
messages: Induced by dark and starvation.
messages: Involved in target of rapamycin (TOR)-regulated translation control, especially under energy-deficient conditions.
messages: Mostly expressed in reproductive tissues, such as flower buds and flowers, and, to a lower extent, in vegetative tissues, such as leaves, roots and stems.
messages: Nucleus
messages: cytosol

3702:AT2G22080
gene id: 3702:AT2G22080
uniprot id: A0A178VRB9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G33090
gene id: 3702:AT2G33090
uniprot id: O49324
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G34215
gene id: 3702:AT4G34215
uniprot id: A0A178UUK7
uniprot id: Q8L9J9
names: Caution
names: Similarity
messages: Belongs to the carbohydrate esterase 6 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G25110
gene id: 3702:AT3G25110
uniprot id: Q42561
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acyl-ACP thioesterase family.
messages: Plays an essential role in chain termination during de novo fatty acid synthesis. Possesses high thioesterase activity for oleoyl-ACP versus other acyl-ACPs. Substrate preference is 18:1 > 18:0 > 16:1.
messages: chloroplast

3702:AT4G23200
gene id: 3702:AT4G23200
uniprot id: A0A1P8B4R8
uniprot id: O65472
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: Membrane

3702:AT5G56750
gene id: 3702:AT5G56750
uniprot id: A0A178UI60
uniprot id: A0A1P8BB26
uniprot id: Q9FJT7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NDRG family.
messages: Cytoplasm
messages: Expressed in root vasculature, cotyledons, leaves, petals, mature stamens and pollen grains.
messages: Induced by sucrose and glucose. Down-regulated by auxin.
messages: Interacts with GB1. Interacts with the heterodimers formed by GB1 and GG1, or GB1 and GG2. Interacts with RGS1.
messages: Interacts with the heterotrimeric G protein beta subunit GB1 and plays an significant role in GB1-dependent regulation of lateral root formation. Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1 (PubMed:19948787). Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL1 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment and maintenance of auxin gradients (PubMed:24223735).
messages: Slight reduction in length of primary root.

3702:AT5G06750
gene id: 3702:AT5G06750
uniprot id: A0A178UHC0
uniprot id: Q84JD5
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: May dephosphorylate and repress plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), thus influencing negatively plant growth and fitness.
messages: Plants missing PP2C42/PP2C-D2, PP2C64/PP2C-D5, PP2C79/PP2C-D7, PP2C63/PP2C-D8 and PP2C68/PP2C-D9 exhibit an increased hypocotyl length, as well as an enhanced sensitivity to LiCl and media acidification.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G13930
gene id: 3702:AT5G13930
uniprot id: A0A384KNE5
uniprot id: P13114
uniprot id: Q460R0
names: Function
names: Similarity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

3702:AT2G36230
gene id: 3702:AT2G36230
uniprot id: A0A654F0R4
uniprot id: O82782
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HisA/HisF family.
messages: chloroplast

3702:AT2G31820
gene id: 3702:AT2G31820
uniprot id: A0A178VYC8
uniprot id: Q9SKB8
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G27420
gene id: 3702:AT2G27420
uniprot id: Q9ZQH7
names: Similarity
messages: Belongs to the peptidase C1 family.

3702:AT5G09740
gene id: 3702:AT5G09740
uniprot id: A0A178U8L6
uniprot id: Q9LXD7
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autoacetylation at Lys-269 is required for proper function.
messages: Belongs to the MYST (SAS/MOZ) family.
messages: Expressed in cotyledons, leaves, stems, roots and, at higher levels in developing flowers, particularly in the anthers and gynoecia (PubMed:19040736). Constitutively expressed in all tissues, predominantly in shoot apical meristem (PubMed:23273925).
messages: Histone acetyltransferase which may be involved in transcriptional activation. Acetylates 'Lys-5' of histone H4 (H4K5ac) (PubMed:16648464, PubMed:17877703). Essential for gametophyte development (PubMed:19040736). Negative regulator of flowering controlling the H4K5ac levels in the FLC chromatin (PubMed:23273925).
messages: Interacts with MRG1 and MRG2.
messages: Knockdown expression of both HAM1 and HAM2 results in earlier flowering.
messages: No visible phenotype, due to the redundancy with HAM1. Ham1 and ham2 double mutants are lethal.
messages: Nucleus
messages: Up-regulated upon UV-B exposure.

3702:AT5G40540
gene id: 3702:AT5G40540
uniprot id: A0A384LAR9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G34390
gene id: 3702:AT1G34390
uniprot id: Q9C8N7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT2G41451
gene id: 3702:AT2G41451
uniprot id: A0A1W6AK35
uniprot id: B3H5R0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 92 family.
messages: Cell membrane
messages: Cytoplasm
messages: Involved in the coordination between cell elongation and cellulose synthesis by promoting the expression of genes involved in cell elongation and cellulose synthesis. Acts as a regulator of plasmodesmatal permeability. Maybe a glycosyltransferase.
messages: cell wall

3702:AT4G33250
gene id: 3702:AT4G33250
uniprot id: A0A654FV66
uniprot id: Q9SZA3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit K family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3702:AT1G19890
gene id: 3702:AT1G19890
uniprot id: A0A178WKL2
uniprot id: Q9FXI7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity).
messages: Detected only in the generative cell and the sperm-cell of late bicellular and tricellular pollen. Not detected in pollen vegetative cells. Replication-independent expression.
messages: No visible phenotype. The high redundancy of histones H3 might compensate for this mutation.
messages: Nucleus
messages: Pollen specific.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA (By similarity).

3702:AT1G31175
gene id: 3702:AT1G31175
uniprot id: A0A384KRM2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38370
gene id: 3702:AT2G38370
uniprot id: A0A1P8AX38
uniprot id: A0A654F1D4
uniprot id: F4ISY0
names: Similarity
messages: Belongs to the WEB family.

3702:AT4G23280
gene id: 3702:AT4G23280
uniprot id: A0A1P8B3T1
uniprot id: A0A1P8B3T4
uniprot id: A0A5S9XVX9
uniprot id: O65479
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: By salicylic acid (SA) or by a bacterial pathogen infection.
messages: Membrane

3702:AT1G19100
gene id: 3702:AT1G19100
uniprot id: A0A654EB60
uniprot id: Q56Y74
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulation of siRNAs and slight reductions of repressive epigenetic modifications (e.g. decreases in DNA methylation and H3K9me2 and increase in H3ac) at target sequences, especially in the shoot apical meristem after rosette leaves development, leading to derepression of silenced-genes (PubMed:22560611, PubMed:23675613). Stochastic silencing phenotype due to randomized RNA-directed DNA methylation (RdDM) (PubMed:23675613). Impaired gene silencing due to decondensation of chromocenters leading to the derepression of DNA-methylated genes and transposable elements (TEs); DNA and histone methylation seems normal (PubMed:22555433, PubMed:24799676, PubMed:27171427).
messages: Belongs to the MORC ATPase protein family.
messages: Homodimer and heterodimers with MORC1/CRT1 and MORC2 (PubMed:24465213, PubMed:24799676). Interacts directly with SUVH9 (PubMed:24465213). Component of an RNA-directed DNA methylation (RdDM) complex that contains at least MORC6, MORC1/CRT1, MORC2, SWI3D and SUVH9 (PubMed:24465213). Stimulated by interaction with DMS3 (PubMed:22560611). Interacts with IDN2, SWI3B, SWI3C and SWI3D (PubMed:27171427).
messages: Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing (PubMed:22560611, PubMed:23675613, PubMed:27171427). Together with SUVH2 and SUVH9, regulates the silencing of some transposable elements (TEs) (PubMed:27171427). Exhibits ATPase activity (PubMed:22560611). May also be involved in the regulation of chromatin architecture/condensation to maintain gene silencing (PubMed:22555433, PubMed:27171427). Binds DNA/RNA in a non-specific manner and exhibits endonuclease activity. Probably involved in DNA repair (By similarity). Positive regulator of defense against the oomycete Hyaloperonospora arabidopsidis (Hpa) (PubMed:27171361).
messages: Nucleus
messages: Stimulated by DMS3.

3702:AT4G16410
gene id: 3702:AT4G16410
uniprot id: A0A178V8D2
uniprot id: Q8VZK4
names: Caution
names: Similarity
messages: Belongs to the ycf33 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G31650
gene id: 3702:AT4G31650
uniprot id: O81782
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G28070
gene id: 3702:AT3G28070
uniprot id: A0A178VEW2
uniprot id: A0A1I9LLQ7
uniprot id: Q8VYZ7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G54570
gene id: 3702:AT1G54570
uniprot id: A0A178WM80
uniprot id: Q9ZVN2
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates upon nitrogen deprivation (PubMed:22623494). Triggered by NAC072/RD26 during senescence (PubMed:29659022).
messages: Acyltransferase involved in fatty acid phytyl ester synthesis in chloroplasts, a process required for the maintenance of the photosynthetic membrane integrity during abiotic stress and senescence (PubMed:22623494). Exhibits phytyl ester synthesis and diacylglycerol acyltransferase activities with broad substrate specificities, and can employ acyl-CoAs, acyl carrier proteins, and galactolipids as acyl donors (PubMed:22623494).
messages: Belongs to the diacylglycerol acyltransferase family.
messages: Highly expressed during senescence.
messages: Interacts with PGM48.
messages: Mostly expressed in flowers (e.g. sepals, petals and stamen).
messages: Plants lacking both PES1 and PES2 grow normally but show reduced phytyl ester and triacylglycerol accumulation.
messages: plastoglobule

3702:AT4G21600
gene id: 3702:AT4G21600
uniprot id: A0A654FRK8
uniprot id: F4JJL3
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the nuclease type I family.
messages: Binds 3 divalent metal cations.
messages: Hydrolyzes, with low efficiency, only single-stranded DNA and RNA without apparent specificity for bases (PubMed:17651368, PubMed:23620482). Endonuclease that recognizes and cleaves some mismatches with high efficiency, including heteroduplex double-stranded DNA; mostly efficient on T/G, A/G and G/G mismatches, less efficient for T/T and poorly efficient for C/C, A/A, T/C and A/C (PubMed:17651368).
messages: Monomer.

3702:ArthCp013
gene id: 3702:ArthCp013
uniprot id: A0A8F5GHA9
uniprot id: P56763
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 1 Zn(2+) ion per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: In plastids the minimal PEP RNA polymerase catalytic core is composed of four subunits: alpha, beta, beta', and beta''. When a (nuclear-encoded) sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: chloroplast

3702:AT4G37980
gene id: 3702:AT4G37980
uniprot id: A0A178V3X8
uniprot id: Q02971
names: Cofactor
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed in the differentiation and elongation zones of primary and lateral roots. Expressed in the hypocotyl, cotyledon and leaf veins, hydathodes and trichomes. In stems, expressed in the vascular cambium region. Expressed in the style, anthers, stamen filaments, vascular tissues of sepals and stigmatic regions in flowers, and abscission, style and stigmatic regions of siliques and seed testa.
messages: Homodimer.
messages: Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

3702:AT3G50750
gene id: 3702:AT3G50750
uniprot id: A0A178VA20
uniprot id: Q9S7F3
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BZR/LAT61 family.
messages: Functions in brassinosteroid signaling. May function as transcriptional repressor.
messages: Nucleus
messages: Phosphorylated. Phosphorylation increases protein degradation.

3702:AT4G40010
gene id: 3702:AT4G40010
uniprot id: Q9SMQ4
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By abscisic acid (ABA), salt, and osmotic stress (at protein level).
messages: Expressed in seedlings.

3702:AT2G35510
gene id: 3702:AT2G35510
uniprot id: O82289
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt stress.
messages: Expressed in the embryo proper at the globular stage. Expressed in the embryo until the torpedo stage, after which expression within the procambial strands becomes pronounced.
messages: Expressed in young developing tissues, such as young leaves and flowers and root tips. In mature plants, expressed in vasculature of leaves and roots.
messages: Interacts with DREB2A, DREB2B, DREB2C and NAC082.
messages: Lacks the conserved catalytic triad His-Tyr-Glu of the active site.
messages: No visible phenotype under normal growth condition.
messages: Nucleus matrix
messages: Probable inactive ADP-ribosyltransferase that functions with RCD1 to regulate oxidative stress, hormonal and developmental responses. May regulate some stress-responsive genes. Seems to play a smaller developmental role than R.

3702:AT1G53720
gene id: 3702:AT1G53720
uniprot id: A0A1P8AQN8
uniprot id: Q6Q151
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Belongs to the cyclophilin-type PPIase family. PPIL4 subfamily.
messages: Component of the BZR1 complex. Interacts with NRPB1 (via CTD domain), SCL28, SCL30, SCL30A, SCL33, SC35, SR30, SR34, RSZ21, RS2Z33, RS31 and RS40.
messages: Nucleus
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Influences somehow regulation of RNA pol II (CTD) phosphorylation. Binds RNA with preferences for GC-rich sequences. Probably involved in activities connecting transcription and pre-mRNA processing. Involved in brassinostroid response.
messages: Ubiquitous.

3702:AT5G51020
gene id: 3702:AT5G51020
uniprot id: A0A178URF2
uniprot id: Q9FI46
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Abnormal organ morphology (e.g. pale green, reduced stature, crumpled and irregular margins in leaves and floral organs, and shorter roots) due to altered pattern of cell division and differentiation. Impaired plastid division leading to enlarged chloroplasts and the formation of cells lacking plastids. Reduced susceptibility to viral infection by cabbage leaf curl virus (CaLCuV).
messages: Belongs to the CpcT/CpeT biliprotein lyase family.
messages: Confers sensitivity to cabbage leaf curl virus (CaLCuV), probably by supporting viral movement.
messages: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (By similarity). Required for plastid division, and involved in cell differentiation and regulation of the cell division plane. Maintenance of plastid homeostasis controls plant preconditioning to stress and stress acclimation.
messages: Mostly expressed in shoot apices, to a lower extent, in leaves, inflorescence stems, buds and cotyledons, and, at low levels, in roots and siliques.
messages: Transient strong induction in response to cabbage leaf curl virus (CaLCuV) infection at an early stage.
messages: chloroplast outer membrane

3702:AT2G42570
gene id: 3702:AT2G42570
uniprot id: A0A654F189
uniprot id: Q9SIN2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT5G15290
gene id: 3702:AT5G15290
uniprot id: Q9LXF3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Homodimer and heterodimers with other CASP proteins. Interacts with CASP1, CASP3 and CASP4.
messages: Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

3702:AT5G23330
gene id: 3702:AT5G23330
uniprot id: Q9FMW8
names: Function
names: Subcellular Location Annotation
messages: Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme.
messages: chloroplast

3702:AT2G30280
gene id: 3702:AT2G30280
uniprot id: Q8GYP3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the IWR1/SLC7A6OS family.
messages: Interacts with NRPD1. Associates with Pol II and Pol V complexes.
messages: Probable regulatory factor for several RNA polymerases. Effector involved in facilitation of Pol V transcription as RNA scaffold and recruitment of silencing complex to target genomic sites.
messages: Reduced DNA methylation at RdDM target loci and pleiotropic developmental phenotype.

3702:AT3G01740
gene id: 3702:AT3G01740
uniprot id: A0A654F383
uniprot id: Q9S799
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mL54 family.
messages: Mitochondrion

3702:AT1G26410
gene id: 3702:AT1G26410
uniprot id: Q9FZC7
names: Cofactor
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Binds 1 FAD per subunit in a bicovalent manner.
messages: No effect on the levels of ICN metabolites.
messages: Probable flavin-dependent oxidoreductase.
messages: The FAD cofactor is bound via a bicovalent 6-S-cysteinyl, 8alpha-N1-histidyl FAD linkage.
messages: cell wall

3702:AT1G07450
gene id: 3702:AT1G07450
uniprot id: Q8RX32
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.

3702:AT1G09860
gene id: 3702:AT1G09860
uniprot id: A0A5S9TL20
uniprot id: O04508
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT3G20700
gene id: 3702:AT3G20700
uniprot id: A0A384KWY7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:ArthCp008
gene id: 3702:ArthCp008
uniprot id: A0A514YJ21
uniprot id: P56759
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: In plastids the F-type ATPase is also known as CF(1)CF(0).
messages: Membrane
messages: chloroplast thylakoid membrane

3702:AT3G03530
gene id: 3702:AT3G03530
uniprot id: Q9SRQ7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the bacterial phospholipase C family.
messages: Cell membrane
messages: Expressed in root tips, cotyledons, on leaf margins, stems, young anthers and funiculus.
messages: Induced by auxin, zeatin, salt and inorganic phosphate deprivation.
messages: No visible phenotype under normal growth conditions, but mutant plants display decreased ABA sensitivity in seed germination, root elongation, and stomatal movement and have decreased tolerance to high salinity and water deficiency. Root hair elongation defects under low inorganic phosphate conditions.
messages: Non-specific phospholipase C (PLC) which assumes major PLC activity during inorganic phosphate starvation. Substrate preference is phosphatidylcholine (PC), but can also hydrolyze phosphatidylethanolamine (PE) with lower efficiency. Has no activity toward phosphatidic acid (PA). Plays an important role in the supply of both inorganic phosphate and diacylglycerol from membrane-localized phospholipids during phosphate deprivation. May be required for lipid-derived signaling molecules that positively modulate abscisic acid (ABA) response and promote plant tolerance to drought and salt stresses. May be involved in brassinolide-mediated signaling in root development.

3702:AT3G55360
gene id: 3702:AT3G55360
uniprot id: A0A178VGP2
uniprot id: Q9M2U2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abnormal organ morphology and stem glossiness.
messages: Belongs to the steroid 5-alpha reductase family.
messages: Catalyzes the last of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme reduces the trans-2,3-enoyl-CoA fatty acid intermediate to an acyl-CoA that can be further elongated by entering a new cycle of elongation. Thereby, it participates in the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators. Required for the elongation of fatty acids precursors of sphingolipids, storage lipids and cuticular waxes.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, leaves, stems, flowers and siliques. Detected in mature seeds.
messages: Membrane
messages: Part of the fatty acid elongase complex which contains a beta-ketoacyl-CoA synthase (KCS), a beta-ketoacyl-CoA reductase (KCR), a beta-hydroxyacyl-CoA dehydratase (HCD) and an enoyl-CoA reductase (ECR).

3702:AT1G49960
gene id: 3702:AT1G49960
uniprot id: A0A5S9WNJ9
uniprot id: P93039
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Highly expressed in the root central cylinder. Expressed in the filaments and stigmatic papillae of pollinated flowers and developing siliques.
messages: Membrane

3702:AT1G58525
gene id: 3702:AT1G58525
uniprot id: A0A1P8ATM9
uniprot id: Q9C653
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT1G72860
gene id: 3702:AT1G72860
uniprot id: A0A178WJ87
uniprot id: A0A384LML1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G67500
gene id: 3702:AT5G67500
uniprot id: A0A2H1ZE94
uniprot id: A0A5S9YIL5
uniprot id: F4K3R8
uniprot id: Q9FJX3
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.
messages: By the bacterial pathogen P.syringae pv. tomato. Down-regulated by abscisic acid (ABA).
messages: Consists mainly of membrane-spanning sided beta-sheets.
messages: Dwarf plants with lesion mimic phenotype and increased expression of the pathogenesis-related genes PR1, PR2 and PR5. Delayed flowering, impaired development of anthers and short siliques with sterile seeds.
messages: Expressed in root tips, steles, leaves, sepals, petals, stamen and pistils.
messages: Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity). Involved in plant growth and development at the vegetative and reproductive stages. Is important for leaf and pollen development and mitochondrial membrane potential steady state. May be involved in ABA-mediated early seedling development and disease resistance.
messages: Mitochondrion outer membrane
messages: Plants silencing VDAC2 show an ABA-insensitive phenotype during early seedling development under ABA treatment.

3702:AT4G27070
gene id: 3702:AT4G27070
uniprot id: P25269
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TrpB family.
messages: Tetramer of two alpha and two beta chains.
messages: The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.
messages: chloroplast

3702:AT3G16900
gene id: 3702:AT3G16900
uniprot id: A0A178VH41
uniprot id: Q9LSQ1
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

3702:AT5G48940
gene id: 3702:AT5G48940
uniprot id: A0A5S9YCZ2
uniprot id: C0LGV1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Binds to RGF peptides such as RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN; these interactions trigger the formation of heterodimers with SERK1 (PubMed:27001831, PubMed:27229311). Interacts with UBP13 (PubMed:29339500).
messages: Membrane
messages: Phosphorylated and ubiquitinated upon interaction with RGF1, thus leading to activation a subsequent degradation (By similarity). Stabilized by UBP12 and UBP13-mediated deubiquitination (By similarity).
messages: Present in the whole roots with a predominant expression in the proximal meristem, including the elongation zone, and a gradual decreases toward the differentiation zone.
messages: Smaller root meristem size and fewer root meristematic cortex cells, associated with shorter roots and a slighty reduced sensitivity to RGF1 (PubMed:27229311). Quintuple mutants rgi1 rgi2 rgi3 rgi4 rgi5 display a consistent short primary root phenotype with a small size of meristem associated with a total insensitivity to RGF1 and undetectable levels of PLT1 and PLT2 (PubMed:27229312). The triple mutant missing RGI1, RGI2 and RGI3 is insensitive to externally applied RGF peptides (e.g. RGF1 and RGF2) and has short roots characterized by a strong decrease in meristematic cell number and declined levels of PLT1 and PLT2 at the root tip (PubMed:27001831).
messages: Specific to root meristems, especially in lateral root meristems (LRM).
messages: Together with RGI1, RGI3, RGI4 and RGI5, acts as receptor of RGF peptides (e.g. RGF1, GLV5/CLEL1/RGF2, GLV7/CLEL3/RGF3, GLV3/RGF4, GLV10/CLEL7/RGF5 and RGF10/CLELN), peptide hormones which maintain the postembryonic root stem cell niche by regulating the expression levels and patterns of the transcription factor PLETHORA (PLT, e.g. PLT1 and PLT2) (PubMed:27229312, PubMed:27229311, PubMed:27001831). Links RGF peptides signal with their downstream components (PubMed:27229311, PubMed:27001831).

3702:AT3G03090
gene id: 3702:AT3G03090
uniprot id: A0A5S9X979
uniprot id: Q8L6Z8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
messages: Membrane

3702:AT4G23710
gene id: 3702:AT4G23710
uniprot id: A0A384LDY1
uniprot id: O82629
uniprot id: Q0WT72
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase G subunit family.
messages: Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.
messages: Vacuole membrane

3702:AT5G52290
gene id: 3702:AT5G52290
uniprot id: F4KG50
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the XPF family.
messages: Essential for the formation of class I meiotic crossovers.
messages: Highest levels in young buds, where male meiosis occurs. Also present at low levels in plantlets, leaves, flowers, and roots.
messages: Interacts with PTD.
messages: Nucleus
messages: Reduction in the number of class I crossovers (COs) during meiosis (PubMed:18812090, PubMed:21771883). Impaired fertility due to altered male and female meiosis (PubMed:18812090).

3702:AT1G63245
gene id: 3702:AT1G63245
uniprot id: Q3ECJ5
names: Developmental Stage
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Expressed specifically in differentiating cells of the root.
messages: Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Acts as an elicitor of the root meristem differentiation through the CLV2/CRN complex signaling pathway (PubMed:20697738, PubMed:28586647). Inhibits irreversibly root growth by reducing cell division rates in the root apical meristem (PubMed:20697738, PubMed:28586647). Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Induced by Pi starvation.
messages: Interacts with the extracellular leucine-rich repeat region of CLV2 and PEPR2.
messages: Mostly expressed in roots, and, to a lower extent, in seedlings and leaves (PubMed:12602871). Expressed in the primary root tip under Pi deficiency (PubMed:28586647).
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-74 enhances binding affinity of the CLE14p peptide for its receptor.
messages: extracellular space

3702:AT1G66490
gene id: 3702:AT1G66490
uniprot id: Q1PFG1
names: Miscellaneous
messages: May be due to intron retention.

3702:AT2G42330
gene id: 3702:AT2G42330
uniprot id: A0A178VSI9
uniprot id: Q9SLC6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFP11/STIP family.
messages: Identified in the spliceosome C complex.
messages: Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT1G24030
gene id: 3702:AT1G24030
uniprot id: A0A1P8AMR4
uniprot id: A0A1P8AMR7
uniprot id: A0A1P8AMU7
uniprot id: A0A654EE66
uniprot id: A0A7G2DSR9
uniprot id: F4I7Q8
uniprot id: Q84M95
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: May be involved in plant defense signaling.

3702:AT3G19550
gene id: 3702:AT3G19550
uniprot id: A0A654F8S2
uniprot id: Q8LEN7
names: Similarity
messages: Belongs to the LEA type 3 family.

3702:AT2G36240
gene id: 3702:AT2G36240
uniprot id: Q9SJN2
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT4G02790
gene id: 3702:AT4G02790
uniprot id: Q8H1F6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family.
messages: GTPase that may function in chloroplast ribosome assembly (Probable).
messages: In contrast to other GTP-binding proteins, this family is characterized by a circular permutation of the GTPase motifs described by a G4-G1-G3 pattern.
messages: The DARXP motif is also sometime designated as G6 region.
messages: chloroplast

3702:AT5G64340
gene id: 3702:AT5G64340
uniprot id: Q9FMF4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bHLH protein family.
messages: Expressed in seedlings, roots, stems, leaves, and flowers.
messages: Homodimer.
messages: Nucleus
messages: Transcription factor. Involved in stem elongation, probably by regulating a subset of genes involved in this process.

3702:AT3G04810
gene id: 3702:AT3G04810
uniprot id: A0A178V8L3
uniprot id: Q9CAU7
names: Caution
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
messages: May be involved in plant development processes.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G01270
gene id: 3702:AT2G01270
uniprot id: Q9ZU40
names: Function
names: Subcellular Location Annotation
messages: Catalyzes the oxidation of sulfhydryl groups in peptide and protein thiols to disulfides with the reduction of oxygen to hydrogen peroxide. May contribute to disulfide bond formation in a variety of secreted proteins (By similarity).
messages: Secreted

3702:AT2G37330
gene id: 3702:AT2G37330
uniprot id: A0A178VRI6
uniprot id: Q9ZUT3
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: ALS3 transcripts are mobile in the phloem sap.
messages: Belongs to the UPF0014 family.
messages: By Al, primarily in leaf hydathodes and the phloem throughout the plant, along with the root cortex. Regulated positively by STOP1.
messages: Cell membrane
messages: Expressed in roots, leaves, stems, and flowers.
messages: Membrane
messages: Required for aluminum (Al) resistance/tolerance, probably by translocating Al from sensitive tissues such as growing roots to tissues less sensisitive to the toxic effects of Al.
messages: Was originally (PubMed:18299247) thought to belong to the ABC transporter family. Lacks the conserved ABC domain, which is one of the features of the ABC transporter family.

3702:AT5G01630
gene id: 3702:AT5G01630
uniprot id: Q7Y1C4
names: Disruption Phenotype
names: Function
names: Subunit
names: Tissue Specificity
messages: Expressed in flower buds.
messages: Interacts with RAD51 and DMC1 (PubMed:15014444, PubMed:16415210). Interacts with DSS1(I) and DSS1(V) (PubMed:16415210). Can interact with both RAD51 and DSS1(I) or both DMC1 and DSS1(I) in a tripartite complex (PubMed:16415210).
messages: Involved in double-strand break repair and/or homologous recombination by mediating RAD51- and DMC1-facilitated DNA repair. Plays an essential role in both somatic and meiotic homologous recombination. Is crucial for the formation of RAD51 and DMC1 foci during male meiotic homologous recombination in prophase I.
messages: No visible phenotype under normal growth conditions, but the double mutants brca2a and brca2b are sterile due to aberrant chromosome aggregates, chromosomal fragmentation and missegregation during meiosis.

3702:AT4G02235
gene id: 3702:AT4G02235
uniprot id: A0A178UXV6
uniprot id: O81421
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G60330
gene id: 3702:AT3G60330
uniprot id: A0A178V5D7
uniprot id: A0A1I9LS30
uniprot id: A0A654FJI2
uniprot id: Q9LY32
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Binds to 14-3-3 proteins. The binding is induced by phosphorylation of Thr-960. Binding to 14-3-3 proteins activates the H(+)-ATPase (By similarity).
messages: Cell membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses (By similarity).

3702:AT3G07560
gene id: 3702:AT3G07560
uniprot id: A0A178VBD0
uniprot id: Q9SRR0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peroxin-13 family.
messages: Component of the PEX13-PEX14 docking complex, a translocon channel that specifically mediates the import of peroxisomal cargo proteins bound to PEX5 receptor (PubMed:16813573, PubMed:17478547, PubMed:19594707). The PEX13-PEX14 docking complex forms a large import pore which can be opened to a diameter of about 9 nm (By similarity). Mechanistically, PEX5 receptor along with cargo proteins associates with the PEX14 subunit of the PEX13-PEX14 docking complex in the cytosol, leading to the insertion of the receptor into the organelle membrane with the concomitant translocation of the cargo into the peroxisome matrix (By similarity). Essential for pollen-tube discharge that take place only in the presence of functional peroxisomes in either the male or the female gametophyte (PubMed:18160292).
messages: Highly expressed in pollen. Detected in shoots, roots, stems, leaves, inflorescences and emasculated postils. Strongly expressed in both male and female gametophytes during fertilization.
messages: Interacts with PEX14; forming the PEX13-PEX14 docking complex (By similarity). Interacts (via N-terminus) with PEX7, but not with PEX5 (PubMed:16813573). Interacts with APEM9 (via N-terminus) (PubMed:24510720).
messages: Lethal, when homozygous.
messages: Peroxisome membrane

3702:AT5G55810
gene id: 3702:AT5G55810
uniprot id: F4K687
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic NMN adenylyltransferase family.
messages: Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate.
messages: Nucleus

3702:AT1G53650
gene id: 3702:AT1G53650
uniprot id: Q9C8M0
names: Domain
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Expressed in cauline leaves, stems, rosette leaves, immature siliques and primary inflorescences but at a low level.
messages: Interacts with MPC.
messages: Nucleus

3702:AT4G20140
gene id: 3702:AT4G20140
uniprot id: C0LGQ5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Dramatic defect in endodermal barrier formation leading to altered potassium ion (K) homeostasis and hypersensitivity to low potassium conditions. Casparian strips are repeatedly interrupted, forming irregularly-sized holes of several micrometer in length, probably due to abnormal CASP proteins patterning. Suppresses the enhanced suberin production when combined to other Casparian strip-defective mutants such as esb1 and casp1 casp3. Extremely sensitive to changes in environmental conditions such as high temperatures and under long-day (LD) conditions leading to dwarf plants. Normal transpiration but altered water transport and root pressure (PubMed:25233277). No visible phenotype during embryogenesis and seedling development. Gso1 and gso2 double mutants produce slightly contorted seeds, with abnormally shaped embryos and seedlings; adhesion between cotyledons and the peripheral tissue of the endosperm, short hypocotyl, and concave cotyledons sometimes fused, with compressed epidermal cells, endosperm tissue partially adherent to the surface of the cotyledons, and a rough surface. In addition, seedlings of gso1 gso2 have also root growth and patterning defects characterized by abnormal numbers of cells in longitudinal files and radial cell layers, as well as aberrant stem cell division planes. Root growth arrest and cell divisions defects are rescued by exogenous application of sucrose, but not patterning defects (PubMed:24123341). The double mutant gso1 gso2 exhibits a repeatedly interrupted, discontinuous Casparian strip due to patch-like localization of the CASPs proteins as a result of partial fusion of individual CASP containing islands in the Casparian strip membrane domain (CSD) (PubMed:28104889).
messages: In flower buds, localized in filaments and stigmas. During embryogenesis, uniform expression from the globular embryo to the mature cotyledonary embryo. After germination, detected in whole cotyledons and in the hypocotyl. During the 6 first days after germination (DAG), highly expressed in roots throughout the elongation zone (EZ) and differentiation zone, but restricted to the endodermis and vasculature. Accumulates progressively in the quiescent center (QC). Down-regulated at sites of lateral root primordia (LRP) initiation. Absent at sites of deliberate wounding in the root. Mostly observed in the inner layers of the mature root, the QC and shoot apical meristem (SAM) (PubMed:24123341). Expressed early during endodermal differentiation, shortly after the onset of endodermal cells elongation (PubMed:25233277).
messages: Interacts with CIF1 and CIF2.
messages: Mostly expressed in siliques, seeds, developing embryos and seedlings, detected in flower buds and roots, but not in leaves or stems.
messages: Repressed by wounding.
messages: Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons (PubMed:18088309). In coordination with GSO2, regulates root growth through control of cell division and cell fate specification. Controls seedling root growth by modulating sucrose response after germination (PubMed:24123341). Receptor of the peptide hormones CIF1 and CIF2 required for contiguous Casparian strip diffusion barrier formation in roots (PubMed:28104889). Required for localizing CASP proteins into the Casparian strip following an uninterrupted, ring-like domain, to trigger endodermal differentiation and thus regulate potassium ion (K) homeostasis. Involved in the maintenance of water transport and root pressure. May also be involved in the regulation of suberin accumulation in the endodermis (PubMed:25233277).

3702:AT1G19350
gene id: 3702:AT1G19350
uniprot id: A0A654ECR7
uniprot id: F4HP45
uniprot id: Q9LN63
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the BZR/LAT61 family.
messages: Cytoplasm
messages: Functions in brassinosteroid signaling. May function as transcriptional repressor.
messages: Interacts with ASK7/BIN2 through its C-terminal domain and with the bHLH transcription factors BIM1, BIM2 and BIM3 through its C- and N-terminal domains. Interacts (via N-terminus) with REF6 and ELF6 (PubMed:12427989, PubMed:15680330, PubMed:18467490). Interacts with MYB30 (PubMed:19170933). Interacts with IWS1 (PubMed:20139304). Interacts with ASHH2/SDG8 (PubMed:24838002). Binds to MYB56 when dephosphorylated in the nucleus of quiescent center (QC) cells (PubMed:24981610). Binds to WRKY46, WRKY54 and WRKY70 to cooperatively regulate the expression of target genes (PubMed:28576847).
messages: Nucleus
messages: Phosphorylated by ASK7/BIN2. Phosphorylation increases protein degradation and/or interferes with the nuclear localization.
messages: Positive regulator of brassinosteroid (BR) signaling. Transcription factor that activates target gene expression by binding specifically to the DNA sequence 5'-CANNTG-3'(E box) through its N-terminal domain. Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BIM1, BIM2 or BIM3. The C-terminal domain is probably involved in transcriptional activation (PubMed:12007405, PubMed:15680330, PubMed:18467490, PubMed:19170933). Recruits the transcription elongation factor IWS1 to control BR-regulated gene expression (PubMed:20139304). Forms a trimeric complex with IWS1 and ASHH2/SDG8 to regulate BR-regulated gene expression (PubMed:24838002). Promotes quiescent center (QC) self-renewal by cell divisions in the primary root. Binds to the E-boxes of the BRAVO promoter to repress its expression (PubMed:24981610).
messages: Reduced brassinosteroid (BR)-mediated quiescent center (QC) cells division.
messages: The central part (140-272) is important for interaction with MYB30.
messages: Ubiquitously expressed in cotyledons, leaves, hypocotyls and roots.

3702:AT4G35410
gene id: 3702:AT4G35410
uniprot id: A0A178V5F3
uniprot id: F4JN08
uniprot id: O23685
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Adaptor protein complex 1 (AP-1) is a heterotetramer composed of two large adaptins (gamma-type subunit and beta-type subunit), a medium adaptin (mu-type subunit) and a small adaptin (sigma-type subunit).
messages: Belongs to the adaptor complexes small subunit family.
messages: Expressed in roots, stems, leaves, flowers and siliques (developing fruits and seeds).
messages: Golgi apparatus
messages: Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: clathrin-coated vesicle membrane

3702:AT4G04080
gene id: 3702:AT4G04080
uniprot id: A0A5S9XQ26
uniprot id: O81433
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NifU family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Component of the core Fe-S cluster (ISC) assembly machinery.
messages: Mitochondrion matrix
messages: Mostly expressed in flowers and pollen, and, to a lower extent, in leaves and roots.
messages: Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (PubMed:17417719). First, a [2Fe-2S] cluster is transiently assembled on the scaffold protein ISCU (ISU1, ISU2 or ISU3). In a second step, the cluster is released from ISCU, transferred to a glutaredoxin, followed by the formation of mitochondrial [2Fe-2S] proteins, the synthesis of [4Fe-4S] clusters and their target-specific insertion into the recipient apoproteins. Cluster assembly on ISCU depends on the function of the cysteine desulfurase complex NFS1-ISD11, which serves as the sulfur donor for cluster synthesis, the iron-binding protein frataxin as the putative iron donor, and the electron transfer chain comprised of ferredoxin reductase and ferredoxin, which receive their electrons from NADH (By similarity).
messages: Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.

3702:AT2G46600
gene id: 3702:AT2G46600
uniprot id: A0A178VT81
uniprot id: Q9ZPX9
names: Caution
names: Function
names: Miscellaneous
names: Subunit
names: Tissue Specificity
messages: Calcium-binding regulatory protein that interacts with kinesin motor protein KCBP in a calcium-dependent manner. Inhibits KCBP microtubule binding activity and microtubule-stimulated ATPase activity. Involved in the regulation of trichome branching through its interaction with KCBP.
messages: Expressed in stems, leaves and flowers.
messages: Interacts with KCBP (via C-terminus). KIC and calmodulin show competitive binding to KCBP. Interacts with CML42. Binds to ABCG36 (PubMed:26315018).
messages: Plants overexpressing KIC1 causes a reduction in the number of trichome branches.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G22890
gene id: 3702:AT3G22890
uniprot id: Q9LIK9
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the sulfate adenylyltransferase family.
messages: Homotetramer.
messages: Mediates selenate (Se) reduction, and promotes Se and sulfur (S) uptake and assimilation.
messages: Repressed locally and systemically by phloem-translocated glutathione (GSH).
messages: chloroplast stroma

3702:AT1G32950
gene id: 3702:AT1G32950
uniprot id: A0A1P8AMB9
uniprot id: A0A5S9WLC0
uniprot id: F4HPF1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: Secreted

3702:AT2G25340
gene id: 3702:AT2G25340
uniprot id: A0A178VTB3
uniprot id: Q9SIQ9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the synaptobrevin family.
messages: Expressed in flowers, leaves, stems and roots.
messages: Involved in the targeting and/or fusion of transport vesicles to their target membrane.
messages: Prevacuolar compartment membrane
messages: The longin domain is critical for the vacuolar localization.
messages: Vacuole membrane

3702:AT1G06140
gene id: 3702:AT1G06140
uniprot id: Q9LND4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-E subfamily.
messages: Mitochondrion

3702:AT3G52770
gene id: 3702:AT3G52770
uniprot id: Q9LXI8
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Competitive inhibitor of the HD-ZIPIII transcription factors in shoot apical meristem (SAM) development. Acts by forming non-functional heterodimers. Part of a negative feedback loop. Involved in SAM development and lateral organ patterning. Essential for proper functioning of stem cells in the SAM.
messages: Expressed in the adaxial epidermis of the cotyledons and leaves, and in the vascular cylinder of wild-type torpedo stage embryos. Confined in the central zone and the organizing center in the shoot apical meristem.
messages: Interacts with REV (PubMed:18055602, PubMed:18408069). Interacts with ATBH-8, ATBH-9, ATB-14 and ATB-15 (PubMed:18408069).
messages: No visible phenotype during the vegetative growth. Disrupted activities of the shoot apical meristem and/or axillary meristems after the transition to reproductive growth. Zpr3 and zpr4 double mutants exhibit homeotic transformation and ectopic meristem activity.
messages: Nucleus
messages: Up-regulated in response to increased HD-ZIPIII activity (PubMed:18055602). Up-regulated by ATHB-14 (PubMed:18408069). Up-regulated by REV (PubMed:22781836).

3702:AT1G10320
gene id: 3702:AT1G10320
uniprot id: Q9SY74
names: Sequence Caution
messages: Intron retention.

3702:AT1G65880
gene id: 3702:AT1G65880
uniprot id: Q9SS01
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Benzoate--CoA ligase involved in benzoyloxyglucosinolate biosynthesis in seeds. Glucosinolates are secondary metabolites involved in pathogen and insect defense of cruciferous plants.
messages: Peroxisome

3702:AT3G44480
gene id: 3702:AT3G44480
uniprot id: F4J339
names: Domain
names: Function
names: Induction
names: Similarity
messages: Belongs to the disease resistance TIR-NB-LRR family.
messages: By infection with Hyaloperonospora arabidopsidis isolate Emco5.
messages: TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis (By similarity). Probably acts as a NAD(+) hydrolase (NADase): in response to activation, catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggering a defense system that promotes cell death (PubMed:31439792, PubMed:31439793).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT2G47400
gene id: 3702:AT2G47400
uniprot id: O22914
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues.
messages: Belongs to the CP12 family.
messages: Binds copper and nickel ions. Copper ions catalyze the oxidation of reduced thiol groups and thus promote formation of the disulfide bonds required for linker activity (By similarity).
messages: Contains two disulfide bonds; only the oxidized protein, with two disulfide bonds, is active in complex formation. The C-terminal disulfide is involved in the interaction with GAPDH and the N-terminal disulfide mediates the binding of PRK with this binary complex.
messages: In flowers, expressed in the sepals and the style. In siliques, present in the tip and the base, in funiculus and in mature seeds. Present in both dried and imbibed seeds, especially in the seed coat and micropyle.
messages: Insensitive to light/darkness, anaerobic treatment and heat, but repressed by sucrose.
messages: Monomer (By similarity). Component of a complex that contains two dimers of PRK, two tetramers of GAPDH and CP12. CP12 associates with GAPDH, causing its conformation to change. This GAPDH/CP12 complex binds PRK to form a half-complex (one unit). This unit probably dimerizes due partially to interactions between the enzymes of each unit.
messages: Mostly expressed in flowers, hypocotyl, cotyledons, leaves, stems, and flower stalks. Barely detectable in roots and siliques. Present in root tips and lateral roots. Accumulates in the cotyledons of etiolated seedlings.
messages: chloroplast

3702:AT4G20010
gene id: 3702:AT4G20010
uniprot id: Q8GXH3
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds preferentially single-stranded DNA. Does not bind to RNA.
messages: Expressed in the floral abscission zone.
messages: No visible phenotype.
messages: chloroplast

3702:AT5G01590
gene id: 3702:AT5G01590
uniprot id: A0A178U7L1
uniprot id: Q7Y1W1
names: Caution
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope.
messages: Part of the Tic complex. Component of the 1-MD complex, composed of TIC20-I, TIC214, TIC100 and TIC56. Interacts with the translocating preproteins. Hydrolysis of ATP is essential for the formation of this complex (PubMed:23372012). The 1-MD complex interacts with TIC21 (By similarity).
messages: Severe defects during embryogenesis, producing abnormal embryos and thereby leading to a lethality of young seedlings.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast inner membrane

3702:AT3G02530
gene id: 3702:AT3G02530
uniprot id: A0A654F3F3
uniprot id: Q9M888
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TCP-1 chaperonin family.
messages: Cytoplasm
messages: Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter.
messages: Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.

3702:AT1G74050
gene id: 3702:AT1G74050
uniprot id: A0A178W8L4
uniprot id: Q9C9C5
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL6 family.

3702:AT4G27730
gene id: 3702:AT4G27730
uniprot id: A0A178V498
uniprot id: Q9T095
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.
messages: Expressed in flowers and roots, and at a low level in leaves and stems. Detected in the cambial zone of the vascular bundles and in the region of lateral root initiation. Low expression in the vascular network of the petals and high in the stamen filaments and the gynoecium.
messages: In young embryos, transient expression in the procambium and, at later stage, expression over the whole surface of the embryo and in the inner tegument, in the area adjacent to the micropyle.
messages: Induced by primisulfuron and abscisic acid, and weakly by 2,4-dichlorophenoxyacetic acid (2,4-D). Not induced by salicylic acid, hydrogen peroxide, reduced and oxidized glutathione or cadmium.
messages: Involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner. Also involved in transport of glutathione derivatives and metal complexes, and may be involved in stress resistance.
messages: Membrane

3702:AT1G31290
gene id: 3702:AT1G31290
uniprot id: A0A1P8ATK9
uniprot id: A0A1P8ATL0
uniprot id: Q9SHF2
names: Function
names: Similarity
messages: Belongs to the argonaute family. Ago subfamily.
messages: Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Main component of the RNA-induced silencing complex (RISC) that binds to a short guide RNA such as a microRNA (miRNA) or small interfering RNA (siRNA). RISC uses the mature miRNA or siRNA as a guide for slicer-directed cleavage of homologous mRNAs to repress gene expression (By similarity).

3702:AT3G62120
gene id: 3702:AT3G62120
uniprot id: Q9M1R2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
messages: cytosol

3702:AT4G39910
gene id: 3702:AT4G39910
uniprot id: A0A5S9Y067
uniprot id: O24454
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase C19 family.
messages: Constitutively and ubiquitously expressed.
messages: Nucleus
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Required for the correct development of pollen.

3702:AT5G60490
gene id: 3702:AT5G60490
uniprot id: A0A654GDE4
uniprot id: Q8LEE9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT2G17320
gene id: 3702:AT2G17320
uniprot id: A0A178VQN4
uniprot id: A0A384L0N0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G13790
gene id: 3702:AT1G13790
uniprot id: Q9LMH6
names: Function
messages: Acts in association with FDM3 and FDM5 for RNA-directed DNA methylation (RdDM).

3702:AT3G62340
gene id: 3702:AT3G62340
uniprot id: A0A5S9XN04
uniprot id: Q93WV6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-c family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT3G44703
gene id: 3702:AT3G44703
uniprot id: A0A384KKY0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G53220
gene id: 3702:AT3G53220
uniprot id: Q8LCH9
names: Caution
names: Function
names: Similarity
messages: Belongs to the thioredoxin family.
messages: Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.
messages: The active site contains a CGVC motif wich differs from the conserved CGPC motif.

3702:AT3G55410
gene id: 3702:AT3G55410
uniprot id: A0A384KLZ3
uniprot id: F4IWV2
names: Similarity
messages: Belongs to the alpha-ketoglutarate dehydrogenase family.

3702:AT3G10140
gene id: 3702:AT3G10140
uniprot id: Q8RY99
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family.
messages: Involved in recombination ability and DNA strand transfer activity.
messages: Mitochondrion

3702:AT4G31580
gene id: 3702:AT4G31580
uniprot id: O81126
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the splicing factor SR family. RSZ subfamily.
messages: Component of the spliceosome. Interacts with AFC2, RS2Z33 and RNU1.
messages: Cytoplasm
messages: Expressed in primary and lateral roots, stems, petioles, abaxial and adaxial epidermis cells, trichomes, unopened flowers, anther filaments, anthers, stigma, pollen, pollen tube, ovule funiculi, integuments, embryo sac and developing seeds.
messages: Extensively phosphorylated on serine residues in the RS domain. Phosphorylated by AFC2.
messages: Nucleus speckle
messages: Sequence-specific RNA-binding protein probably involved in pre-mRNA splicing. In vitro, can complement efficiently splicing-deficient mammalian SRSF7-depleted HeLa cell extract.
messages: nucleolus
messages: nucleoplasm

3702:AT1G08910
gene id: 3702:AT1G08910
uniprot id: A0A0A7EPL0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PIAL protein ligase family.
messages: E4-type SUMO ligase that promotes SUMO chain formation in a SCE1-dependent manner and thus contributes to a pathway for proteolytic removal of sumoylation substrates. Involved in stress responses (e.g. osmotic, salt and abscisic acid ABA) and sulfur metabolism.
messages: Expressed in leaves, stems and flowers, and, at low levels, in siliques and old leaves.
messages: No obvious growth difference under standard greenhouse conditions. Altered sulfur metabolism. Reduced growth in high osmotic pressure (mannitol) and in response to abscisic acid (ABA), but enhanced growth and fitness in high salt (NaCl) condition. Abnormal steady state levels of SUMO conjugates in various conditions.
messages: Nucleus

3702:AT5G64170
gene id: 3702:AT5G64170
uniprot id: A8MQN2
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Circadian-regulation (PubMed:23818596, PubMed:25012192). Maximum levels of expression in the subjective morning (PubMed:23818596, PubMed:25012192). Up-regulated by a light pulse in the middle of the night via the phytochrome family of red/far-red light photoreceptors (PubMed:23818596, PubMed:25332490, PubMed:25012192). Up-regulated following a temperature upshift during the dark period (PubMed:24690904). Repressed by members of the TOC1/PRR1 family of clock genes (PubMed:23818596).
messages: Expressed in roots, stems, leaves, seedlings, cotyledons, inflorescences and siliques. Highest expression in root tips, young leaves and vasculatur tissues.
messages: Interacts with CCA1, LHY, REV4 and REV8, but not with PRR7 or PRR9.
messages: No differences in hypocotyl length when grown in complete darkness, but longer hypocotyls in plants under continuous white or red light (PubMed:23818596). Lengthened circadian cycle (PubMed:25012192).
messages: Nucleus
messages: The evening complex (EC) nighttime repressor is implicated in the temperature responsiveness by binding to the LNK1 promoter (PubMed:25332490, PubMed:24690904). Responds also to some extent to a dark/light transition in an EC-independent manner (PubMed:25332490).
messages: Transcriptional coactivator necessary for expression of the clock genes PRR5 and TOC1 (PubMed:25012192, PubMed:25848708). Antagonizes REV8 function in the regulation of anthocyanin accumulation (PubMed:25848001). Involved in red light input to the clock (PubMed:25012192). Activates clock-controlled genes with afternoon peak (PubMed:23818596). Mediates light inhibition of hypocotyl elongation (PubMed:23818596).
messages: Unable to bind to DNA, but recruited to the evening element (EE)-containing region of the PRR5 and TOC1 promoters through its interaction with the DNA binding proteins REV8 and REV4 (PubMed:25012192, PubMed:25848708).

3702:AT3G14810
gene id: 3702:AT3G14810
uniprot id: A0A178VCQ0
uniprot id: F4IWA1
uniprot id: Q9LH74
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer.
messages: Membrane

3702:AT4G37110
gene id: 3702:AT4G37110
uniprot id: A0A178V0R2
uniprot id: A0A1P8B8S1
uniprot id: A0A1P8B8T9
uniprot id: Q0WPT6
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Nucleus

3702:AT1G27950
gene id: 3702:AT1G27950
uniprot id: A0A178WLV2
uniprot id: Q9C7F7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in seeds after imbibition (PubMed:23893219). High levels in the aerial portion of 10 days old seedlings. Accumulates in the epidermis during cuticle biosynthesis (e.g. in inflorescence stems). Also detected in flowers, in upper portion of the styles, pollen, veins of the sepals and petals, silique walls and seeds in the early stages of development (PubMed:23893219). In epidermis, present in trichomes, leaf mesophyll cells, and stem cortex and xylem.
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Endoplasmic reticulum
messages: Golgi apparatus
messages: Lipid transfer protein that, together with LTPG2, binds to lipids and functions as a component of the cuticular lipid export machinery that performs extensive export of intracellular lipids (e.g. C29 alkane) from epidermal cells to the surface to build the cuticular wax layer and silique walls. Involved in the establishment of resistance to the necrotrophic fungal pathogen Alternaria brassicicola. Contributes to pre-invasive defense against some non-host powdery mildew pathogens by preventing the penetration of the epidermal cell wall by the fungal agents (e.g. Blumeria graminis f. sp. hordei (Bgh)) (PubMed:30102837). Maybe involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition (By similarity).
messages: Membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Reduced cuticular wax load on the stem surface and in silique walls, with altered cuticular lipid composition (especially C29 alkane) associated with diffuse cuticular layer structure. Increased number of plastoglobules in the stem cortex and leaf mesophyll cells, protrusions of the cytoplasm into the vacuole in the epidermis, and enhanced susceptibility to infection by the necrotrophic fungal pathogen Alternaria brassicicola. Increased susceptibility to penetration of the epidermal cell wall by the non-host mildew fungal agent Blumeria graminis f. sp. hordei (Bgh) (PubMed:30102837).
messages: Up-regulated in the epidermis of stems and leaves. Expressed in the epidermis, stem cortex, vascular bundles and mesophyll cells in root tips, cotyledons, seedlings, leaves, caulines, flowers, siliques, pollen, and early-developing seeds.
messages: cell wall

3702:AT5G44160
gene id: 3702:AT5G44160
uniprot id: Q9FFH3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Delayed flowering (PubMed:21265895, PubMed:25929516). Roots of the triple mutant jkd mgp nuc contain patches of undivided ground tissue (GT), indicating that cortex and endodermis layers are not fully separated. The quadruple mutant line jkd mgp nuc scr has short root meristems, lacks endodermis and miss Casparian strip (PubMed:25829440).
messages: Expressed throughout development.
messages: Highly expressed in vegetative organs and at lower levels in flowers and siliques. Expressed predominantly in roots. In roots, present in cortex, endodermis, and pericycle layer (PubMed:25829440).
messages: Inhibition of transcription factor activity by KIN10-mediated phosphorylation at Thr-98, Ser-178 and Ser-182 under sugar deprivation conditions, thus delaying flowering.
messages: Interacts with AKIN10.
messages: Nucleus
messages: Transcription activator that binds to the DNA sequence 5'-CTTTTGTCC-3' (PubMed:21265895, PubMed:25929516). Regulates photoperiodic flowering by modulating sugar transport and metabolism (PubMed:21265895, PubMed:25929516). Regulates SUS1 and SUS4 (PubMed:21265895). Transcription factor that regulates tissue boundaries and asymmetric cell division (PubMed:25829440). Contributes to the sequestration of 'SHORT-ROOT' to the nucleus (PubMed:25829440).
messages: Up-regulated by 'SHORT-ROOT' (SHR)(PubMed:16640459). Strongly down-regulated by sugar deprivation, but not regulated by day-length.

3702:AT2G33280
gene id: 3702:AT2G33280
uniprot id: A0A1P8B1Z9
uniprot id: A0A1P8B207
uniprot id: A0A5S9X3M4
uniprot id: O22780
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Folate-biopterin transporter (TC 2.A.71) family.
messages: Could mediate folate transport.
messages: Membrane
messages: chloroplast membrane

3702:AT3G05970
gene id: 3702:AT3G05970
uniprot id: A0A5S9X9I0
uniprot id: Q8LPS1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation (Probable). Preferentially uses palmitate, palmitoleate, oleate, linoleate and eicosenoate as substrates (PubMed:12177484, PubMed:12366803). Can use myristate and linolenate as substrates (PubMed:12366803). May play a regulatory role both in fatty acid import into glyoxysomes and in fatty acid beta-oxidation (PubMed:12481085). Functions redundantly with LACS7 in lipid mobilization for beta-oxidation during seed germination, which is essential for postgerminative growth and seedling establishment (PubMed:14742880, PubMed:16844736).
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.
messages: Expressed in roots, stems, leaves flowers and germinating seedling (PubMed:12177484). Preferentially expressed in seeds and senescent leaves.
messages: Glyoxysome membrane
messages: Induced during seed germination.
messages: Peroxisome
messages: Seedlings of the lacs6 and lacs7 double mutant were arrested in postgerminative growth due to inability to mobilize fatty acids for beta-oxidation, a necessary process to pursue the development.
messages: Up-regulated by ozone.

3702:AT5G10540
gene id: 3702:AT5G10540
uniprot id: A0A178UD97
uniprot id: Q949P2
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M3 family.
messages: Binds 1 zinc ion.
messages: Inhibited by salicylic acid.
messages: No effect on germination.
messages: Oligopeptidase that may be involved in the degradation of proteasome-generated peptides (By similarity). Binds salicylic acid.
messages: Up-regulated by pathogen infection, elicitor treatment and flg22, a 22-amino acid sequence of the conserved N-terminal part of flagellin.
messages: Up-regulated during senescence.
messages: cytosol

3702:AT1G78530
gene id: 3702:AT1G78530
uniprot id: A0A178WFX3
uniprot id: A0A178WG86
uniprot id: A0A384KIM8
uniprot id: Q9SYM9
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G16840
gene id: 3702:AT3G16840
uniprot id: A0A384L6L8
uniprot id: Q93Y39
names: Caution
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX24/MAK5 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G47295
gene id: 3702:AT3G47295
uniprot id: Q8LE92
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sulfated-peptide plant hormone family.
messages: Promotes cellular proliferation and expansion.
messages: Secreted
messages: The sulfation and the glycosylation are required for full activity.

3702:AT2G27450
gene id: 3702:AT2G27450
uniprot id: A0A654EWS7
uniprot id: B9DGV9
uniprot id: Q8VYF5
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the carbon-nitrogen hydrolase superfamily.
messages: Expressed in roots, stems, leaves and flowers.
messages: Homooctamer (isoform 2).
messages: Involved in polyamine biosynthesis (PubMed:12435743). Catalyzes the hydrolysis of N-carbamoylputrescine to produce putrescine and ammonia (PubMed:12435743).
messages: May be due to a competing donor splice site. Used for enzyme characterization.
messages: Not induced by osmotic stress.

3702:AT1G10588
gene id: 3702:AT1G10588
uniprot id: A0A178WI21
uniprot id: Q1G2Y4
uniprot id: Q1G361
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GASA family.
messages: Secreted

3702:AT3G52070
gene id: 3702:AT3G52070
uniprot id: A0A384KPE9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G47730
gene id: 3702:AT2G47730
uniprot id: Q96266
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GST superfamily. Phi family.
messages: By salicylic acid, ethylene, methyl jasmonate, auxin, H(2)O(2), metolachlor, and the pathogen Hyaloperonospora parasitica.
messages: In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB) and glutathione peroxidase activity toward cumene hydroperoxide and linoleic acid-13-hydroperoxide. May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: Isoform 1 is predominantly expressed in leaves and isoform 2 in roots.
messages: chloroplast
messages: cytosol

3702:AT1G27130
gene id: 3702:AT1G27130
uniprot id: Q9FUS6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: By Hyaloperonospora parasitica. Down-regulated by salicylic acid, ethylene and methyl jasmonate.
messages: In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB) and benzyl isothiocyanate (BITC). May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT3G46710
gene id: 3702:AT3G46710
uniprot id: Q9STE5
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family. RPP13 subfamily.
messages: Potential disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT5G52630
gene id: 3702:AT5G52630
uniprot id: Q9LTF4
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT1G70920
gene id: 3702:AT1G70920
uniprot id: A0A1P8AQQ9
uniprot id: A0A654EMW2
uniprot id: A9Z1E8
uniprot id: Q8GXM7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HD-ZIP homeobox family. Class II subfamily.
messages: Nucleus
messages: Probable transcription factor.

3702:AT5G54680
gene id: 3702:AT5G54680
uniprot id: A0A178UAU8
uniprot id: Q9FH37
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Homodimer (Probable). Interacts with BTS and BHLH47/PYE (PubMed:20675571, PubMed:25452667).
messages: Nucleus
messages: Plants are more sensitive to IAA conjugates.
messages: Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes.
messages: Widely expressed throughout development, mostly in vasculatures.

3702:AT1G68270
gene id: 3702:AT1G68270
uniprot id: A0A178WI72
uniprot id: Q9C9G2
names: Caution
names: Function
names: Similarity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G28260
gene id: 3702:AT1G28260
uniprot id: Q9FZ99
names: Disruption Phenotype
names: Function
messages: May play a role in growth and development.
messages: No visible phenotype under normal growth conditions.

3702:AT2G44520
gene id: 3702:AT2G44520
uniprot id: O64886
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiA prenyltransferase (TC 3.D.4.8) family.
messages: Converts protoheme IX and farnesyl diphosphate to heme O.
messages: Mitochondrion inner membrane

3702:AT4G17718
gene id: 3702:AT4G17718
uniprot id: Q2V3H5
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT4G10470
gene id: 3702:AT4G10470
uniprot id: A0A384LQ97
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G36050
gene id: 3702:AT2G36050
uniprot id: A0A178VSX7
uniprot id: Q9SJ45
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in roots, cauline leaves, shoots, flower buds and siliques.
messages: Interacts with BLH1 and BLH3.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Plants over-expressing OFP15 show small rosette size, late flowering, reduced fertilization and blunt-end siliques.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development through the regulation of BEL1-LIKE (BLH) and KNOX TALE (KNAT) homeodomain transcription factors.
messages: Transcriptional repressor that regulates multiple aspects of plant growth and development.

3702:AT5G05050
gene id: 3702:AT5G05050
uniprot id: Q9FF69
names: Similarity
messages: Belongs to the peptidase C1 family.

3702:AT2G22680
gene id: 3702:AT2G22680
uniprot id: Q9ZQ46
names: Function
names: Tissue Specificity
messages: E3 ubiquitin-protein ligase involved in the regulation of root growth. Acts as positive regulator of root gravitropism. Possesses E3 protein ligase activity in vitro.
messages: Expressed in root tips and leaf primordia.

3702:AT5G11830
gene id: 3702:AT5G11830
uniprot id: A0A178UEM1
uniprot id: Q9LYE8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G24000
gene id: 3702:AT4G24000
uniprot id: A0A1P8B4V8
uniprot id: Q8VYR4
uniprot id: W8Q6J0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like G subfamily.
messages: Expressed in young seedlings, primarily in the vascular tissue.
messages: Golgi apparatus membrane
messages: Membrane
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

3702:AT1G10680
gene id: 3702:AT1G10680
uniprot id: Q9SGY1
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
messages: Expressed in the sieve elements.
messages: Interacts with 1-naphthylphthalamic acid (NPA).
messages: Membrane
messages: Regulated by the transcription factors NAC045 and NAC086.

3702:AT5G43980
gene id: 3702:AT5G43980
uniprot id: Q8GXV7
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: (Microbial infection) Interacts with Grapevine fanleaf virus (GFLV) 2B-MP (PubMed:20886105). Interacts with Cauliflower mosaic virus (CaMV) movement protein (PubMed:20886105).
messages: Belongs to the cysteine-rich repeat secretory protein family. Plasmodesmata-located proteins (PDLD) subfamily.
messages: By downy mildew fungal infection.
messages: Cell membrane
messages: Highly expressed in cell suspension. Expressed in epidermal and spongy mesophyll cells, and the cell wall interface at the base of the leaf trichome (at protein level) (PubMed:19704520, PubMed:18215111). Expressed in haustoria-containing cells (PubMed:25393742).
messages: Interacts with AZI1 (PubMed:27078071). Interacts with PDLP5 (PubMed:27078071). Does not interact with DIR1 (PubMed:27078071).
messages: Modulates cell-to-cell trafficking (PubMed:18215111). Required for systemic acquired resistance (SAR) which is mediated by the signaling molecules azelaic acid (AzA), glycerol-3-phosphate (G3P), and salicylic acid (SA). Required for the proper localization and stability of AZI1 which is involved in SAR (PubMed:27078071). Mediates callose deposition during downy mildew fungal infection around haustoria. Haustoria are unicellular protrusions from hyphae and function as the site of molecular exchange of nutrients and effectors between host and pathogen (PubMed:25393742).
messages: PDLPs were initially named Cysteine-rich secretory proteins based on a classification work that failed to predict the transmembrane region at the C-terminus (PubMed:11402176). However, it was later shown that PDLPs are membrane proteins (PubMed:18215111, PubMed:20886105).
messages: pdlp1 and pdlp3 double mutant shows altered protein diffusion (measured using GFP). In pdlp1, pdlp2 and pdlp3 triple mutant there is inhibition of GFLV 2BMP tubule formation. Virus cell-to-cell movement is negatively affected. There is a 22% reduction in mean surface area of infection foci by GFLV and an approximately 12 h delay in long distance movement in comparison to wild-type plants. There is also a systemic delay in systemic Cauliflower mosaic virus (CaMV) spread. Overexpression shows a reduced-growth phenotype that correlates with transgene copy number and cell-to-cell trafficking of GFP, used to measure protein transport, is significantly impaired.
messages: plasmodesma

3702:AT5G41980
gene id: 3702:AT5G41980
uniprot id: A0A7G2FJT3
uniprot id: Q9FHY5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HARBI1 family.
messages: Nucleus

3702:AT4G33040
gene id: 3702:AT4G33040
uniprot id: A0A178V3R3
uniprot id: Q8L9S3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).

3702:AT2G46850
gene id: 3702:AT2G46850
uniprot id: A0A5S9X7L7
uniprot id: Q8S8N4
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: The protein kinase domain is predicted to be catalytically inactive. Lacks the conserved Asp active site at position 476, which is replaced by an Asn residue.

3702:AT3G28917
gene id: 3702:AT3G28917
uniprot id: Q9LJW5
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Homo- and heterodimers (By similarity). Interacts with ZHD1, ZHD3, ZHD5, ZHD8, ZHD10 and ZHD13.
messages: Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes.
messages: Mostly expressed in stems, flowers and siliques, and, to a lower extent, in inflorescence.

3702:AT5G54010
gene id: 3702:AT5G54010
uniprot id: Q9FN26
uniprot id: W8Q2P4
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G72260
gene id: 3702:AT1G72260
uniprot id: Q42596
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant thionin (TC 1.C.44) family.
messages: Detected in rosette leaves and at a very high level in flowers and in siliques.
messages: Highly induced in seedlings by pathogens, wounding, silver nitrate, and methyl jasmonate.
messages: Secreted
messages: Seems to function as a defense factor. Thionins are small plant proteins which are toxic to animal cells. They seem to exert their toxic effect at the level of the cell membrane. Their precise function is not known.

3702:AT2G20463
gene id: 3702:AT2G20463
uniprot id: A0A178VYH8
uniprot id: Q2V476
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G24600
gene id: 3702:AT2G24600
uniprot id: F4IPR3
uniprot id: Q9SJA5
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G39170
gene id: 3702:AT2G39170
uniprot id: A0A178VQL7
uniprot id: O80964
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BORCS8 family.
messages: Lysosome membrane
messages: Membrane

3702:AT5G16350
gene id: 3702:AT5G16350
uniprot id: A0A1P8BHI6
uniprot id: A0A1P8BHJ4
uniprot id: Q9FFE8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Membrane
messages: Mostly expressed in flowers and siliques and at low levels in stems.

3702:AT1G03840
gene id: 3702:AT1G03840
uniprot id: Q9ZWA6
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the ground tissue and stele cells of embryos and 2-days post-germination roots but not in the quiescent center (PubMed:17785527). Detected only in cells that perform asymmetric cell divisions (PubMed:17785527). In roots, present in cortex, endodermis, and pericycle layer (PubMed:25829440).
messages: Interacts with SHR, SCR and JKD, but not with itself (PubMed:17785527). Interacts with SIEL (PubMed:21924907). Binds to RGA and SCL3 competitively in the nucleus (PubMed:24821766).
messages: MGP expression is SHR- and SCR-dependent.
messages: May be due to a competing acceptor splice site.
messages: No visible phenotype (PubMed:21265895, PubMed:25829440). Roots of the triple mutant jkd mgp nuc contain patches of undivided ground tissue (GT), indicating that cortex and endodermis layers are not fully separated. The quadruple mutant line jkd mgp nuc scr has short root meristems, lacks endodermis and miss Casparian strip (PubMed:25829440).
messages: Nucleus
messages: Transcription factor that regulates tissue boundaries and asymmetric cell division (PubMed:17785527, PubMed:25829440). Contributes to the sequestration of 'SHORT-ROOT' to the nucleus (PubMed:17785527, PubMed:25829440). Interacts with the SCR and MGP promoters (PubMed:21935722). Does not show transcription activity by itself, but regulates the transcription of downstream genes through interaction with other transcription factors (PubMed:21935722). Binds DNA via its zinc fingers (PubMed:24821766). Recognizes and binds to SCL3 promoter sequence 5'-AGACAA-3' to promotes its expression when in complex with RGA (PubMed:24821766). Positively involved in gibberellic acid (GA) signaling (PubMed:24821766).
messages: Up-regulated by the transcription factor JKD, and down-regulated by SHR, SCR and itself.

3702:AT4G30935
gene id: 3702:AT4G30935
uniprot id: A0A654FUP6
uniprot id: P59583
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group I family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

3702:AT4G11910
gene id: 3702:AT4G11910
uniprot id: Q66WT5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the staygreen family.
messages: Constitutively expressed at low level during leaf development, but up-regulated during seed maturation and senescence, when the leaf color changes from green to yellow.
messages: Induced during natural and dark-induced leaf senescence.
messages: Interacts with the light harvesting complex II (LHCII) (PubMed:24719469). Interacts with the chlorophyll catabolic enzyme (CCE) RCCR (PubMed:26732493, PubMed:24719469).
messages: Magnesium chelatase involved in chlorophyll a degradation in the chlorophyll-protein complexes of photosystem I (PSI) and photosystem II (PSII) (PubMed:26732493, PubMed:27604697). Contributes to the degradation of PSI and PSII in the thylakoid membranes (PubMed:26732493, PubMed:27604697). Required to trigger chlorophyll degradation during natural and dark-induced leaf senescence (Probable) (PubMed:26732493). Mediates chlorophyll degradation during embryo degreening (PubMed:24043799, PubMed:26732493, PubMed:28873256). Recombinant SGR2 possesses high dechelating activity against chlorophyll a, very low activity against chlorophyllide a, and no activity against chlorophyll b (PubMed:27604697).
messages: No effect on seed degreening; probably due to redundancy with SGR1. Sgr1 and sgr2 double mutant has an embryo stay-green phenotype.
messages: chloroplast thylakoid membrane

3702:AT5G43100
gene id: 3702:AT5G43100
uniprot id: A0A1P8BFY0
uniprot id: F4K4L3
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT1G07745
gene id: 3702:AT1G07745
uniprot id: Q9LQQ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family. RAD51 subfamily.
messages: Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents.
messages: Nucleus

3702:AT2G30350
gene id: 3702:AT2G30350
uniprot id: A0A178VUD7
uniprot id: Q682H4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SLX1 family.
messages: Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.
messages: Forms a heterodimer with a member of the SLX4 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G01695
gene id: 3702:AT1G01695
uniprot id: A0A178WAP9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G58684
gene id: 3702:AT1G58684
uniprot id: A0A384KXC9
uniprot id: B5BRD8
uniprot id: Q93VB8
names: Similarity
messages: Belongs to the universal ribosomal protein uS5 family.

3702:AT3G57560
gene id: 3702:AT3G57560
uniprot id: Q9SCL7
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the acetylglutamate kinase family. ArgB subfamily.
messages: Inhibited by arginine. Inhibition is relieved by binding to GLB1.
messages: Interacts with GLB1. Interaction is dependent of MgATP and inhibited by 2-oxoglutarate, arginine, glutamate, citrate, and oxaloacetate.
messages: Involved in the arginine biosynthetic pathway via the intermediate compound ornithine.
messages: chloroplast stroma

3702:AT3G07260
gene id: 3702:AT3G07260
uniprot id: Q9SFV6
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By auxin, cytokinin, gibberellin, abscisic acid (ABA), brassinosteroid and hypoxia.
messages: Expressed in roots and vascular tissues near the shoot apex in young seedlings.
messages: May play a role in the control of plant organ development (By similarity). Does not show transactivation activity in yeast (PubMed:23192389).
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT5G61920
gene id: 3702:AT5G61920
uniprot id: A0A178USJ6
uniprot id: A0A1P8BFA1
uniprot id: Q9FH51
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
messages: Belongs to the FLX family.
messages: Early flowering.
messages: Interacts with FRI.
messages: Involved in FLC activation and flowering time control, but has no transcriptional activation activity. Probably part of the FRI-C complex, but is not redundant with FLX.

3702:AT2G07771
gene id: 3702:AT2G07771
uniprot id: A0A5S9YI60
uniprot id: F4IL76
uniprot id: P92527
names: Caution
names: Function
names: Miscellaneous
names: RNA Editing
names: Similarity
names: Subcellular Location Annotation
messages: A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of the duplicated genes (At2g07681 and At2g07771) is demonstrated.
messages: Belongs to the CcmC/CycZ/HelC family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May be involved in the export of heme to the mitochondrion for the biogenesis of c-type cytochromes.
messages: Membrane
messages: Mitochondrion membrane
messages: The stop codon at position 233 is created by RNA editing.
messages: Was originally (PubMed:18299247) thought to belong to the ABC transporter family. Lacks the conserved ABC domain, which is one of the features of the ABC transporter family.

3702:AT2G19620
gene id: 3702:AT2G19620
uniprot id: A0A178VUN2
uniprot id: A0A1P8AYR3
uniprot id: A8MRP5
uniprot id: Q9ZUN1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NDRG family.
messages: Cytoplasm
messages: Interacts with the heterodimers formed by GB1 and GG1, or GB1 and GG2. Interacts with RGS1.
messages: Involved in a signaling pathway that modulates root auxin transport and auxin gradients. Acts partially by positively regulating the auxin carrier PIN2 and AUX1 (PubMed:19948787). Acts, together with GB1 as positive regulator of meristem initiation and branching. GB1 and NDL3 positively regulate basipetal inflorescence auxin transport and modulate MAX2 expression in shoots, which regulates organ and lateral meristem formation by the establishment and maintenance of auxin gradients (PubMed:24223735).

3702:AT4G15530
gene id: 3702:AT4G15530
uniprot id: A0A654FPJ2
uniprot id: B9DHM5
uniprot id: O23404
names: Activity Regulation
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by light-induced dephosphorylation. Inhibited by dark-induced phosphorylation. Both reactions are catalyzed by PDRP1.
messages: Belongs to the PEP-utilizing enzyme family.
messages: Both isoforms 1 and 2 increase up to 7 days after sowing, but then decline.
messages: Cytoplasm
messages: Formation of phosphoenolpyruvate. May be involved in regulating the flux of carbon into starch and fatty acids of seeds and in the remobilization of nitrogen reserves in senescing leaves.
messages: Homotetramer. Interacts with RP1 and RP2.
messages: Isoform 1 is expressed in leaves, flowers and siliques. Isoform 2 is found in cotyledons, rosette and cauline leaves, petioles, flowers and siliques.
messages: Isoform 2, but not isoform 1, is induced during darkness.
messages: Phosphorylation of Thr-543 in the dark inactivates the enzyme. Dephosphorylation upon light stimulation reactivates the enzyme.
messages: Produced by alternative promoter usage. Cytoplasmic.
messages: Produced by alternative splicing of isoform 1.
messages: The N-terminal domain contains the ATP/Pi binding site, the central domain the pyrophosphate/phosphate carrier histidine, and the C-terminal domain the pyruvate binding site.
messages: The catalytic core domain alone is sufficient for the binding to PDRP1 but not for the binding to PDRP2.
messages: The reaction takes place in three steps, mediated by a phosphocarrier histidine residue located on the surface of the central domain. The two first partial reactions are catalyzed at an active site located on the N-terminal domain, and the third partial reaction is catalyzed at an active site located on the C-terminal domain. For catalytic turnover, the central domain swivels from the concave surface of the N-terminal domain to that of the C-terminal domain.
messages: Translation of the sequence shown in PubMed:16915520 was N-terminally extended.
messages: chloroplast

3702:ArthCp024
gene id: 3702:ArthCp024
uniprot id: A0A1B1W4U6
uniprot id: P56799
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity (By similarity).
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.
messages: chloroplast

3702:AT4G12810
gene id: 3702:AT4G12810
uniprot id: Q9SU05
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abolished brassinosteroid (BR)-induced ASK7/BIN2/SK21 degradation, and severe BR-insensitivity. Suppression of the constitutive BR-response phenotype in the dominant mutant bzr1-1D, and accumulation of phosphorylated BZR1.
messages: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Required for brassinosteroid (BR) signal transduction. Mediates ASK7/BIN2/SK21 inactivation both by competing with substrate binding (e.g. BZR1) and by promoting its ubiquitination and subsequent proteasomal degradation.
messages: Cytoplasm
messages: Expressed in seedlings, leaves, stems, flower buds and flowers.
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex. Binds directly to several GSK3 family proteins such as SKP1A/ASK1, ASK1/SK11, ASK3/SK12, ASK5/SK13, ASK7/BIN2/SK21, ASK9/SK22 and ASK6/SK23. Interacts with ASK7/BIN2/SK21 in a brassinosteroid (BR)-dependent manner.
messages: nucleolus

3702:AT3G33520
gene id: 3702:AT3G33520
uniprot id: A0A178U6Y1
uniprot id: Q8LGE3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the actin family. ARP6 subfamily.
messages: Component of the SWR1 chromatin-remodeling complex composed of at least ARP6/ESD1/SUF3, PIE1, SWC6, SWC2 and H2AZs (HTA8, HTA9, HTA11). Interacts directly with SWC6/SEF and PIE1. Also interacts with H2A.F/Z proteins.
messages: Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling. Binds to the promoter region of FLC chromatin. Required for the activation of FLC and FLC/MAF genes expression to levels that inhibit flowering, through both histone H3 and H4 acetylation and methylation mechanisms. Involved in several developmental processes including organization of plant organs, leaves formation, flowering time repression, and fertility. Modulates photoperiod-dependent epidermal leaves cell development; promotes cell division in long days, and cell expansion/division in short days. May be involved in the regulation of pathogenesis-related proteins (PRs).
messages: Cytoplasm
messages: Early flowering, leaf serration, production of extra petals and weak apical dominance.
messages: Mostly expressed in flowers, and, to a lower extent, in seedlings, shoot apex, stems, siliques, seeds, and roots (at protein level).
messages: Nucleus

3702:AT4G09010
gene id: 3702:AT4G09010
uniprot id: A0A1P8B8W6
uniprot id: A0A1P8B8Y3
uniprot id: A0A5S9XSG0
uniprot id: P82281
names: Caution
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxidase family.
messages: Down-regulated during leaf senescence.
messages: Was originally thought to be an ascorbate peroxidase (PubMed:12068123, PubMed:16034597). PubMed:19828564 fails to show any peroxidase activity associated with TL29 and demonstrates that TL29 could bind neither heme nor ascorbate. TL29 lacks the heme-binding site, the proton acceptor and the transition state stabilizer, which are conserved features of the ascorbate peroxidase.
messages: chloroplast thylakoid lumen

3702:AT5G35950
gene id: 3702:AT5G35950
uniprot id: Q9FGC4
names: Similarity
messages: Belongs to the jacalin lectin family.

3702:AT2G31955
gene id: 3702:AT2G31955
uniprot id: Q39055
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the radical SAM superfamily. MoaA family.
messages: Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.
messages: Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.
messages: Expressed in all organs, with an abundant expression in the roots.
messages: Homodimer.
messages: Mitochondrion matrix

3702:AT3G03190
gene id: 3702:AT3G03190
uniprot id: Q96324
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT5G32460
gene id: 3702:AT5G32460
uniprot id: F4KFT6
names: Subcellular Location Annotation
messages: Nucleus

3702:AT4G35280
gene id: 3702:AT4G35280
uniprot id: O65499
names: Developmental Stage
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by the transcription factor DUO1.
messages: Expressed exclusively in pollen.
messages: Expressed in the germ cells following microspore division, increases during development and persists into mature pollen.
messages: Interacts (via the EAR motif) with TPL.
messages: Mediates the regulation of male germ cell division by DUO1.
messages: Nucleus

3702:AT2G36680
gene id: 3702:AT2G36680
uniprot id: A0A178VWM6
uniprot id: Q3EBL9
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the VPS37 family.
messages: Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs) (By similarity).
messages: Component of the endosomal sorting required for transport complex I (ESCRT-I), composed of ELC, VPS28 and VPS37. Interacts with ELC.
messages: Endosome
messages: May be due to a competing acceptor splice site.

3702:AT4G25010
gene id: 3702:AT4G25010
uniprot id: A0A178V6E7
uniprot id: Q9SW25
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SWEET sugar transporter family.
messages: Cell membrane
messages: Forms homooligomers and/or heterooligomers.
messages: Mediates both low-affinity uptake and efflux of sugar across the membrane.
messages: Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
messages: Membrane

3702:AT2G47920
gene id: 3702:AT2G47920
uniprot id: O82259
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NET family.
messages: Cell membrane
messages: Cytoplasm
messages: Dimer or oligomer. Interacts with PVA11/VAP27.
messages: Endoplasmic reticulum membrane
messages: Plant-specific actin binding protein. Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane.
messages: The C-terminus is involved in oligomerization and is essential for membrane association. The NAB domain, also called NAB (NET actin-binding) domain, is involved in F-actin binding.

3702:AT5G12990
gene id: 3702:AT5G12990
uniprot id: Q9LXU0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Expressed in the entire embryo at the globular stage. Progressively restricted to the basal regions of the embryo that form the root meristem and the vasculature. After germination, detected in the differentiation zone of the stele that forms the inner layers of the root and in differentiating columella cells (CCs).
messages: Extracellular signal peptide secreted by differentiated root cells that regulates root cell fate. Acts with ACR4 as a ligand-receptor pair in a signal transduction pathway, coordinating movement of the root tip and organization of cell divisions in the root meristem. Promotes cell differentiation in the distal root meristem in a dose-dependent manner, especially the transition from columella stem cells (CSC) daughters into columella cells (CCs). Induces ACR4 expression in root quiescent center (QC). Involved in WUX5 QC-specific expression pattern regulation. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed at low levels in stems and apex, and, to a lower extent, in roots, seedlings, leaves, flowers, siliques and pollen.
messages: Short roots with irregularly shaped root tips and following a waving pattern. Delayed differentiation of columella stem cells (CSC) daughters into columella cells (CCs).
messages: extracellular space

3702:AT2G25890
gene id: 3702:AT2G25890
uniprot id: A0A178VRV6
uniprot id: O82308
uniprot id: Q494N8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oleosin family.
messages: Lipid droplet
messages: Membrane

3702:AT1G03270
gene id: 3702:AT1G03270
uniprot id: A0A178W3C6
uniprot id: Q9ZVS8
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G05700
gene id: 3702:AT1G05700
uniprot id: C0LGD6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT1G08135
gene id: 3702:AT1G08135
uniprot id: P0CG16
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane
messages: Preferentially expressed in pollen.

3702:AT2G40970
gene id: 3702:AT2G40970
uniprot id: O22210
names: Biotechnology
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in roots, leaves, stems, petioles, filaments, stigma, pedicels, sepals, anthers, petals, and siliques.
messages: Induced by drought, salt and abscisic acid (ABA). Down-regulated by cold.
messages: No visible phenotype under normal growth conditions, but mutant plants show increased tolerance to freezing.
messages: Nucleus
messages: Probable transcription factor that acts as a negative regulator of freezing tolerance via a CBF-independent pathway.
messages: Repression of MYBC1/MTF1 promotes Arabidopsis plant transformation by Agrobacterium tumefaciens.

3702:AT1G68110
gene id: 3702:AT1G68110
uniprot id: A0A178W783
uniprot id: Q9C9X5
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: Vesicle
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT1G18590
gene id: 3702:AT1G18590
uniprot id: A0A384KIF3
uniprot id: M1FZP1
uniprot id: Q9FZ80
names: Activity Regulation
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Expression reaching a maximum in 2-week-old plants and a minimum in flowering plants.
messages: Highly expressed in roots, stems and mature leaves. Low expression in young leaves and flowers. Barely detected in siliques.
messages: Induced by coronatine, but not by methyl jasmonate or high sulfate concentration.
messages: Inhibited by phosphoadenosine 5'-phosphate (PAP).
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of desulfo-glucosinolates (dsGSs), the final step in the biosynthesis of the glucosinolate core structure. Substrate preference is desulfo-benzyl glucosinolate > desulfo-6-methylthiohexyl glucosinolate. Increased specific activity with increasing chain length of desulfo-glucosinolate derived from methionine. Preferred substrate is desulfo-8-methylthiooctyl glucosinolate.

3702:AT3G17740
gene id: 3702:AT3G17740
uniprot id: Q9LSH4
names: Similarity
messages: Belongs to the NRDE2 family.

3702:AT2G46670
gene id: 3702:AT2G46670
uniprot id: C0SV91
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G79430
gene id: 3702:AT1G79430
uniprot id: A0A654F195
uniprot id: Q9SAK5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MYB-CC family.
messages: Differentiation of tracheary-like elements of xyleme at the site of the phloem pole leading to seedling lethality.
messages: Expressed in shoots and roots, specifically in the developing protophloem sieve elements (PubMed:14614507). Detected in phloem and/or cambium (PubMed:15923329). Expressed in the phloem tissues of various organs, including leaves and cotyledons, during vegetative growth (PubMed:26239308).
messages: May be due to an intron retention.
messages: Nucleus
messages: Specifically expressed in the developing protophloem sieve elements soon after the phloem-specific cell divisions have taken place. Also found in the companion cells and metaphloem sieve elements. May not be necessary for the initial steps of protophloem differentiation.
messages: Transcription factor required for phloem identity. Has a dual role both in promoting phloem differentiation and in repressing xylem differentiation during vascular development. Regulates the expression of the transcription factor NAC045 (AC A4VCM0). May activate the transcription of specific genes involved in phosphate uptake or assimilation (PubMed:15592750). Promotes flowering through transcriptional activation of both FT and its transport machinery component, FTIP1 (PubMed:26239308).
messages: Up-regulated by phosphate deficiency.

3702:AT1G71960
gene id: 3702:AT1G71960
uniprot id: Q84TH5
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: ADP and vanadate (ABC transporters inhibitor) inhibit the ATP-dependent abscisic acid (ABA) uptake.
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: By abscisic acid (ABA) (PubMed:20133881). In cauline leaves, activated by cold stress, but repressed by heat stress (PubMed:22525244). Within inflorescence meristems, down-regulated by both cold and heat stress treatments (PubMed:22525244). In developing siliques, activated by cold stress, but unaffected by heat stress (PubMed:22525244).
messages: Cell membrane
messages: High affinity abscisic acid (ABA) transporter that mediates the export of ABA, with a preference for (+)-ABA, through the plasma membrane, especially in vascular tissues (e.g. phloem companion cells), and is involved in the intercellular ABA signaling pathway (PubMed:20133881, PubMed:20935463, PubMed:24521878, PubMed:26517905). Together with ABCG31, export ABA from the endosperm to deliver it to the embryo via ABCG30 and ABCG40-mediated import to suppress radicle extension and subsequent embryonic growth (PubMed:26334616).
messages: Hypersensitivity to abscisic acid (ABA).
messages: Mainly expressed in vascular tissues,predominantly in phloem companion cells, with highest levels in roots and seeds, and lower levels in seedlings, stems, leaves and flowers (PubMed:20133881, PubMed:24521878). Mostly observed in inflorescence meristems relative to cauline leaves and developing siliques (PubMed:22525244). In seeds, mainly expressed in the endosperm and, to a lesser extent, in the embryo (PubMed:26334616).

3702:AT1G53025
gene id: 3702:AT1G53025
uniprot id: A0A178W2M3
uniprot id: A0A384L751
uniprot id: Q8GY87
names: Caution
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G14760
gene id: 3702:AT5G14760
uniprot id: A0A654G1Q8
uniprot id: Q94AY1
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.
messages: Binds 1 FAD per subunit.
messages: Catalyzes the oxidation of L-aspartate to iminoaspartate.
messages: Catalyzes the oxidation of L-aspartate to iminoaspartate. Can complement nadB-deficient E.coli mutant. Plays a role in stomatal immunity.
messages: Embryonic lethality when homozygous.
messages: Interacts in vitro with QS (PubMed:18978034).
messages: The viable mutant fin4 (T-DNA insertion in the promoter) is impaired in the RBOHD-dependent pathogen-associated molecular pattern (PAMP)-induced reactive oxygen species (ROS) burst and stomatal closure.
messages: chloroplast

3702:AT3G52720
gene id: 3702:AT3G52720
uniprot id: A0A178V615
uniprot id: O04846
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: Disulfide bridge between Cys-52 and Cys-216 is required for correct folding.
messages: Endoplasmic reticulum
messages: N-glycosylation is required for activity and chloroplast targeting, probably by facilitating folding and endoplasmic reticulum (ER) export.
messages: Reversible hydration of carbon dioxide.
messages: Strongly expressed in aerial tissues including leaves, stems, flowers and siliques.
messages: chloroplast stroma

3702:AT5G59340
gene id: 3702:AT5G59340
uniprot id: C0SVU6
uniprot id: Q6X7K1
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WUS homeobox family.
messages: Detected in the egg cell and the central cell of the embryo sac, but not in the synergids, the antipodals or the male gametophyte. After fertilization, it is expressed in the zygote. After the first division of the zygote, it is detected exclusively in the apical daughter cell, while WOX8 is expressed in the basal daughter cell. Subsequently, it is expressed in all cells of the 4-cell embryo proper and predominantly in the apical domain of the 8-cell embryo. However, in some 8-cell embryos it is also weakly expressed in the central domain suggesting that expression shifts to the most apical cells during this stage. Expression remains restricted to the apical domain in the 16-cell embryo and the early-globular stage. Not expressed in the apical domain thereafter. However, in heart stage embryos it is weakly expressed in a ring of epidermal cells approximately at the junction of hypocotyl and root. Not expressed in mature embryos, endosperm or postembryonically in inflorescences.
messages: Nucleus
messages: Probable transcription factor involved in embryonic patterning. Required for apical embryo development after fertilization. Its specific localization to the apical daughter cell of the zygote, while WOX8 is confined to the basal cell, suggests that the asymmetric division of the plant zygote separates determinants of apical and basal cell fates.

3702:AT2G16990
gene id: 3702:AT2G16990
uniprot id: A0A1P8AXG6
uniprot id: A0A1P8AXG7
uniprot id: A0A1P8AXI4
uniprot id: A0A1P8AXL3
uniprot id: F4IMD9
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G33475
gene id: 3702:AT1G33475
uniprot id: A0A178WEZ1
uniprot id: Q84WF5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the synaptobrevin family.
messages: Membrane
messages: Non-SNARE longin protein involved in membrane-trafficking machinery.

3702:AT3G22780
gene id: 3702:AT3G22780
uniprot id: A0A654F9R9
uniprot id: Q9LUI3
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the lin-54 family.
messages: Despite a wild-type flower phenotype, the null mutant presents defects in pollen, carpel and ovule development, including a failure in megasporogenesis. Small siliques.
messages: Expressed at the first stage of pollen development in uninucleate microspores and bicellular pollen but not in tricellular and mature pollen.
messages: Nucleus
messages: Probable floral-specific cell division component, required for proper organ formation in flowers. Regulates the floral meristem cell division and the inflorescence meristem organization. Plays a role in development of both male and female reproductive tissues.
messages: The cysteine-rich domain CRC binds zinc in vitro.
messages: Ubiquitous but expressed mostly in flowers with highest levels in developing ovules and microspores.

3702:AT1G01900
gene id: 3702:AT1G01900
uniprot id: A0A178W900
uniprot id: Q84WS0
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S8 family.
messages: By auxin-rich callus induction medium (CIM) in root explants followed by a transfer onto cytokinin-containing shoot induction medium (SIM).
messages: Serine protease that cleaves the phytosulfokines PSK3, PSK2 and PSK5 in vitro. Phytosulfokines are plant growth factors or peptide hormones that promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: extracellular matrix

3702:AT5G15860
gene id: 3702:AT5G15860
uniprot id: Q94AS5
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AB hydrolase superfamily. Isoprenylcysteine methylesterase family.
messages: By ABA, osmotic stress and salt and heat treatments.
messages: Catalyzes the demethylation of isoprenylcysteine methylesters. In vitro, is specific for N-acetyl-S-farnesyl-L-cysteine methyl ester (AFCme) and has low activity toward N-acetyl-S-geranyl-L-cysteine methyl ester (AGCme). Acts as a positive regulator of ABA signaling. May be involved in the demethylation and inactivation of isoprenylated negative regulators of abscisic acid (ABA) signaling. Carboxyl methylation is a reversible and potentially regulated step in the post-translational modification of prenylated proteins.
messages: Endoplasmic reticulum membrane
messages: Expressed in roots, rosette and cauline leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Plants overexpressing ICME exhibit enhanced ABA inhibition of seed germination and ABA induction of stomatal closure. Plant silencing ICME exhibit a reduced ABA sensitivity in seed germination assays.

3702:AT5G06600
gene id: 3702:AT5G06600
uniprot id: F4K3X1
uniprot id: Q9FPT1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the peptidase C19 family.
messages: Interacts with SIC/RON3.
messages: May be due to a competing acceptor splice site.
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity). Positive regulator of root meristem development that, together with UBP13, prevents the ubiquitination and turnover of RGFR1 induced by the RGF1 hormone peptide, thus influencing PLT1 and PLT2 expression (PubMed:29339500).
messages: Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.
messages: The double mutant ubp12 ubp13 roots are completely insensitive to exogenous applied hormone peptide RGF1 associated with an accelerated RGF1-induced ubiquitination and turnover of RGFR1 and are characterized by a reduced number of cortical meristem cells and disturbed PLT1 and PLT2 expression.

3702:AT4G20090
gene id: 3702:AT4G20090
uniprot id: O49436
names: Function
names: Similarity
messages: Belongs to the PPR family. P subfamily.
messages: May play a role in embryogenesis.

3702:AT5G54160
gene id: 3702:AT5G54160
uniprot id: Q9FK25
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. COMT subfamily.
messages: Does not require magnesium. Completely inhibited by 5 mM of either NiSO4 or p-chloromercuribenzoate (pCMB). Acetylserotonin O-methyltransferase activity is inhibited by caffeate (PubMed:25039887).
messages: Expressed in seedlings, leaves, stems, flowers and siliques, mostly in vascular tissues. Mostly expressed in the apical part of the stems and in roots. Expressed in the endothecium and the epidermal anther, but not in the tapetum. Also detected in all epidermal tissues of flower organs, including petals, sepals and the tip of the stigma.
messages: Methylates OH residues of flavonoid compounds. Converts quercetin into isorhamnetin. Dihydroquercetin is not a substrate. Catalyzes the methylation of monolignols, the lignin precursors. Does not contribute to the phenylpropanoid pattern of the pollen tryphine, but is probably confined to isorhamnetin glycoside biosynthesis (PubMed:10700397, PubMed:12777055, PubMed:20652169, PubMed:22258746). Involved in melatonin biosynthesis. Can function as acetylserotonin O-methyltransferase. Catalyzes the transfer of a methyl group onto N-acetylserotonin, producing melatonin (N-acetyl-5-methoxytryptamine) (PubMed:25039887).
messages: Monomer.
messages: Observed in young seedling and progressively restricted to vascular tissues. Present in whole blade of young leaves but confined to the vascular tissues of mature leaves. In stems, mostly present in xylem, mature phloem and differentiating fibers. In siliques, only present in the lignified extremities. Expressed during early and late stages of flower development.
messages: Reduced levels of syringyl (S) units in lignins that contain more 5-hydroxyguaiacyl units (5-OH-G), the precursors of S-units. Substitution of sinapyl (S) alcohol-derived substructures by 5-hydroxyconiferyl alcohol (5OHG)-derived moieties in fiber cell walls. No effect on hydroxycinnamic acid amides in pollen.

3702:AT1G43710
gene id: 3702:AT1G43710
uniprot id: A0A178WA97
uniprot id: Q9MA74
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the group II decarboxylase family.
messages: By nickel and manganese ions.
messages: Catalyzes the biosynthesis of ethanolamine from serine. Highly specific for L-serine and does not attack D-serine, L-phosphoserine, phosphatidylserine, L-histidine L-glutamate L-tyrosine or L-tryptophan. Decarboxylation of free serine is the major source of ethanolamine production in plants and ethanolamine metabolism is crucial for the synthesis of choline, phosphatidylethanolamine (PE) and phosphatidylcholine (PC), and thus for plant growth.
messages: Dwarf plants with necrosis along the edges of the leaves, multiple inflorescences and sterile flowers.
messages: Expressed in roots, leaves, flowers and siliques.
messages: Homotetramer.
messages: No inhibition by ethanolamine, choline or their phosphoesters.
messages: The mutant phenotype can be rescue by exogenous application of ethanolamine.
messages: cytosol

3702:AT5G48190
gene id: 3702:AT5G48190
uniprot id: Q9LDS4
names: Similarity
messages: Belongs to the glycosyltransferase 92 family.

3702:AT1G18550
gene id: 3702:AT1G18550
uniprot id: A0A178W9U1
uniprot id: F4ICA0
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-8 subfamily.

3702:ArthCp010
gene id: 3702:ArthCp010
uniprot id: A0A178U6M9
uniprot id: A0A1B1W4S9
uniprot id: P56758
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase A chain family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a, b, b' and c.
messages: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast thylakoid membrane

3702:AT2G46280
gene id: 3702:AT2G46280
uniprot id: A0A384L026
uniprot id: Q0WVZ3
uniprot id: Q38884
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit I family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3702:AT3G23590
gene id: 3702:AT3G23590
uniprot id: Q9LUG9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 33 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator.
messages: Component of the Mediator complex.
messages: No visible phenotype, but higher levels of sinapate esters in leaves.
messages: Nucleus

3702:AT1G08985
gene id: 3702:AT1G08985
uniprot id: Q8GWU1
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G04570
gene id: 3702:AT1G04570
uniprot id: A0A178WE58
uniprot id: A0A1P8APB4
uniprot id: F4I5Q2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Folate-biopterin transporter (TC 2.A.71) family.
messages: Could mediate folate transport.
messages: Membrane
messages: chloroplast membrane

3702:AT1G55120
gene id: 3702:AT1G55120
uniprot id: A0A1P8ANV4
uniprot id: A0A5S9WM16
uniprot id: B6EUC8
uniprot id: F4HYP3
uniprot id: Q67XZ3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 6-fructan exohydrolase that can use phlein, levan, neokestose, levanbiose, 6-kestose, and 1-kestose as substrates.
messages: Belongs to the glycosyl hydrolase 32 family.
messages: Expressed in seedlings, leaves, flowers, and seeds.
messages: Seems to not have any beta-fructofuranosidase activity.
messages: apoplast
messages: cell wall

3702:AT4G28190
gene id: 3702:AT4G28190
uniprot id: Q8GZA8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cytoplasm
messages: Delayed flowering and higher floral organs number with extra petals and sepals (PubMed:23632855). Increased H3K27me3 marks but decreased H3K4me3 marks on target gene loci (PubMed:23632855). Plants missing both EMF1 and ULT1 have rescued normal H3K27me3 marks and H3K4me3 marks (PubMed:23632855). Plants lacking both CRC and ULT1 exhibit strong floral meristem (FM) indeterminacy with reiterations of extra floral whorls in the center of the flower associated with reduced AGAMOUS and SUPERMAN levels (PubMed:18441215).
messages: Expressed at low levels in seedlings, roots, shoots, leaves, stems, inflorescences, pollen, flowers and siliques, with highest levels dividing tissues including inflorescence.
messages: Expressed in embryonic shoot apical meristems, in inflorescence and floral meristems, and in developing stamens, carpels and ovules. Also expressed in vegetative meristems and leaf primordia.
messages: Interacts with HHO5 (PubMed:26903506). Associates with ATX1 for trimethylating 'Lys-4' on histone H3 (H3K4me3) at flower MADS box gene loci (PubMed:23632855).
messages: It is uncertain whether Met-1 or Met-8 is the initiator.
messages: Nucleus
messages: Putative transcription factor that acts as a key negative regulator of cell accumulation in shoot and floral meristems. Negatively regulates the size of the WUSCHEL (WUS)-expressing organizing center in inflorescence meristems. May act by down-regulating expression of WUS. Acts as an antirepressor that counteracts EMF1 action through modulation of trimethylated 'Lys-4' on histone H3 (H3K4me3) marks on target gene loci (including genes involved in salt stress response and flower development) (PubMed:23632855). Collaboratively with RBL and CYP40/SQN, influences floral meristem (FM) determinacy in an AGAMOUS and SUPERMAN-dependent manner, thus contributing to the floral developmental homeostasis (PubMed:18441215).

3702:AT2G45430
gene id: 3702:AT2G45430
uniprot id: A0A178VXD2
uniprot id: O22130
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed at the hypocotyl-root transition zone and the root hair zone. Also detected in the inflorescence.
messages: Highly expressed in earlier growth stages in hypocotyls, roots and the vascular bundles of the leaves. Detected later in the vascular bundles of the basal leaves aera.
messages: Homodimer. Interacts with HDA1/HDA19, HDA6 and HDA9.
messages: Nucleus
messages: Overexpression of AHL22 results in delayed flowering and inhibition of hypocotyl growth.
messages: Slightly longer hypocotyls.
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). Binds an AT-rich DNA sequences in the FLOWERING LOCUS T (FT) promoter (PubMed:22442143). Acts redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering and regulation of the hypocotyl elongation. Plays a role in both photo- and skotomorphogenesis (PubMed:19517252). Acts as a chromatin remodeling factor that modifies the architecture of FLOWERING LOCUS T (FT) chromatin by modulating both H3 acetylation and methylation leading to the regulation of FT expression during flowering induction (PubMed:22442143).

3702:AT3G26610
gene id: 3702:AT3G26610
uniprot id: Q38958
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT1G22650
gene id: 3702:AT1G22650
uniprot id: A0A1P8ANG1
uniprot id: A0A5S9VJS1
uniprot id: F4I2X9
names: Function
names: Similarity
messages: Belongs to the glycosyl hydrolase 100 family.
messages: Invertase that cleaves sucrose into glucose and fructose.

3702:AT1G35260
gene id: 3702:AT1G35260
uniprot id: Q9C7I7
names: Similarity
messages: Belongs to the MLP family.

3702:AT4G39250
gene id: 3702:AT4G39250
uniprot id: F4JVB8
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
messages: Assigned as a member of the MYB-related gene family, I-box-binding-like subfamily.
messages: May be due to an intron retention.
messages: Nucleus
messages: Probable transcription factor.

3702:AT4G17430
gene id: 3702:AT4G17430
uniprot id: Q1JPM5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT4G00900
gene id: 3702:AT4G00900
uniprot id: O23087
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIA subfamily.
messages: Membrane
messages: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment.

3702:AT4G19560
gene id: 3702:AT4G19560
uniprot id: A0A1P8B7P7
uniprot id: Q56YF8
names: Similarity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin T subfamily.

3702:AT5G44110
gene id: 3702:AT5G44110
uniprot id: Q9XF19
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCI family.
messages: By sucrose.
messages: Cytoplasm
messages: Expressed in root elongating zone and root meristem, as well as in elongating etiolated hypocotyls.

3702:AT1G07070
gene id: 3702:AT1G07070
uniprot id: A0A654EI66
uniprot id: Q9LMK0
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL33 family.

3702:AT5G23240
gene id: 3702:AT5G23240
uniprot id: Q9FMX6
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Altered root hair development and reduced hair length.
messages: Belongs to the DnaJ family.
messages: Expressed in roots, exclusively in the stele.
messages: Induced by salt stress.
messages: May function together with HSC70 chaperone to assist protein folding and prevent protein aggregation during salt stress in the chloroplast (Probable). Involved in root development. Required for the position-dependent cell fate determination during root hair development (PubMed:25339971).
messages: chloroplast

3702:AT1G36160
gene id: 3702:AT1G36160
uniprot id: Q38970
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Embryo lethal with an arrest in development at the late globular stage in acc1-1 and acc1-2 null allele mutants. In the leaky pas3 and gk alleles, defect in embryo development, very short and thick hypocotyl and misshaped cotyledons that do not expand. Abnormal root development, abnormal fused leaves and compact rosettes with multiple shoots. Uncoordinated cell divisions in the apical region. Reduced levels of very long chain fatty acids in seeds.
messages: Expressed in flower buds at stage 6 of development in tapetal cells and at stage 10 in the epidermal cells of growing petals and ovaries. In young siliques, expressed transiently in the inner integument of the ovules just prior to testal deposition.
messages: Expressed in roots, trichomes, epidermal leaf cells, siliques, petals, anthers, and seeds.
messages: Homodimer.
messages: Multifunctional enzyme that catalyzes the carboxylation of acetyl-CoA, forming malonyl-CoA, which is used in the plastid for fatty acid synthesis and in the cytosol in various biosynthetic pathways including fatty acid elongation. Required for very long chain fatty acids elongation. Necessary for embryo and plant development. Plays a central function in embryo morphogenesis, especially in apical meristem development. Involved in cell proliferation and tissue patterning. May act as a repressor of cytokinin response.
messages: The acc1-1 and pas3-1 mutants can be partially complemented by exogenous supply of malonate.
messages: cytosol

3702:AT1G72220
gene id: 3702:AT1G72220
uniprot id: A0A178WDF0
uniprot id: Q8LFY8
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G79020
gene id: 3702:AT1G79020
uniprot id: A0A654EQA8
uniprot id: Q8GYQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enhancer of polycomb family.
messages: Nucleus

3702:AT1G55290
gene id: 3702:AT1G55290
uniprot id: A0A178WBY8
uniprot id: Q9C899
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: 2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Low expression in roots.
messages: No effect on scopoletin and scopolin levels in the roots.
messages: Not induced by 2,4-D treatment.

3702:AT3G01220
gene id: 3702:AT3G01220
uniprot id: Q8LAT0
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: By auxin.
messages: Expressed 3 day after germination (DAG) in first rosette leaf primordia around the veins in the apical part of the leaf and close to the midvein in the basal part of the leaf. At later stage, expressed in new forming veins, and veins and fascicular cambium of mature leaves.
messages: Nucleus
messages: Probable transcription factor.
messages: Widely expressed.

3702:AT5G45490
gene id: 3702:AT5G45490
uniprot id: Q9FHI7
names: Caution
names: Function
messages: Although strongly related to the NB-LRR family, it is shorter and lacks the LRR repeats that are present in other proteins of the family.
messages: Possible disease resistance protein.

3702:AT3G13320
gene id: 3702:AT3G13320
uniprot id: A0A178VHU2
uniprot id: Q39254
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/proton exchanger (CAX) subfamily.
messages: Inhibited by excess of Ca(2+) and Cd(2+), Mn(2+), and Zn(2+).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.
messages: Vacuole membrane

3702:AT3G07190
gene id: 3702:AT3G07190
uniprot id: A0A384L9M7
uniprot id: Q9SFU9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.

3702:AT2G16740
gene id: 3702:AT2G16740
uniprot id: A0A178VQZ9
uniprot id: Q9SLE4
names: Function
names: Similarity
messages: Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.
messages: Belongs to the ubiquitin-conjugating enzyme family.

3702:AT3G51260
gene id: 3702:AT3G51260
uniprot id: A0A178VPE4
uniprot id: P30186
uniprot id: Q2V3Q0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel. Interacts with KIN10 and KIN11 SnRK subunits, and with the SKP1A/ASK1 subunit of the SCF E3 ubiquitin ligase complex.
messages: Cytoplasm
messages: During cell proliferation.
messages: Expressed in roots, leaves and flowers.
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. Mediates the association of the SCF(TIR1) E3 ubiquitin ligase complex with the proteasome.

3702:AT3G15260
gene id: 3702:AT3G15260
uniprot id: A0A178V8X3
uniprot id: Q9LDA7
names: Caution
names: Cofactor
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G47810
gene id: 3702:AT5G47810
uniprot id: Q9FIK0
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Allosterically activated by AMP.
messages: Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Homotetramer.
messages: Mostly expressed in roots and stems.

3702:AT1G05055
gene id: 3702:AT1G05055
uniprot id: A0A178W5Z7
uniprot id: Q9ZVN9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTF2H2 family.
messages: Component of the 7-subunit TFIIH core complex composed of XPB, XPD, TFB1/GTF2H1, GTF2H2/P44, TFB4/GTF2H3, TFB2/GTF2H4 and TFB5/GTF2H5, which is active in NER. The core complex associates with the 3-subunit CDK-activating kinase (CAK) module composed of CYCH1/cyclin H1, CDKD and MAT1/At4g30820 to form the 10-subunit holoenzyme (holo-TFIIH) active in transcription (By similarity). Interacts with XPD (PubMed:16623910).
messages: Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription (By similarity). Can restore UV resistance in the NER-deficient ssl1-1 yeast mutant (PubMed:16623910).
messages: Nucleus

3702:AT3G52210
gene id: 3702:AT3G52210
uniprot id: A0A178VDV9
uniprot id: Q5HZ60
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. mRNA cap 0 methyltransferase family.
messages: In the N-terminal section; belongs to the dsDNA virus mRNA guanylyltransferase family.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: mRNA capping methyltransferase that methylates the N7 position of the added guanosine to the 5'-cap structure of mRNAs. Binds RNA containing 5'-terminal GpppC (By similarity).

3702:AT1G03982
gene id: 3702:AT1G03982
uniprot id: A0A178WCR8
uniprot id: Q9ZWB8
names: Caution
names: Function
messages: Functions as downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses (By similarity).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G53500
gene id: 3702:AT3G53500
uniprot id: A0A178V7R7
uniprot id: Q9FYB7
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the splicing factor SR family. RS2Z subfamily.
messages: Component of the spliceosome.
messages: Extensively phosphorylated on serine residues in the RS domain.
messages: Nucleus
messages: Probably involved in intron recognition and spliceosome assembly.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: The splicing pattern of the pre-mRNA is regulated in a tissue-specific manner and by development, and changes in response to various types of abiotic stresses.

3702:AT4G34380
gene id: 3702:AT4G34380
uniprot id: A0A178UYD7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G01890
gene id: 3702:AT4G01890
uniprot id: F4JG70
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT4G23660
gene id: 3702:AT4G23660
uniprot id: F4JPA9
uniprot id: Q93YP7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Arrest of embryo development at an early stage of zygotic embryogenesis.
messages: Belongs to the UbiA prenyltransferase family.
messages: Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
messages: Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. Required for embryo development.
messages: Expressed in flowers.
messages: Mitochondrion inner membrane

3702:AT1G26796
gene id: 3702:AT1G26796
uniprot id: A0A178WA63
uniprot id: Q2V4L0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT2G22910
gene id: 3702:AT2G22910
uniprot id: Q84JF4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetyltransferase family. ArgA subfamily.
messages: N-acetylglutamate synthase involved in arginine biosynthesis.
messages: chloroplast

3702:AT1G64750
gene id: 3702:AT1G64750
uniprot id: A0A384KR55
uniprot id: F4I886
uniprot id: Q2PDG5
uniprot id: Q9XIR8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DSS1/SEM1 family.
messages: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Nucleus
messages: Part of the 26S proteasome (By similarity). Interacts with BRCA2A and BRCA2B (PubMed:16415210). Interacts with UCH1 and UCH2 (PubMed:22951400). Can form a tripartite complex with both RAD51 and BRCA2B or both DMC1 and BRCA2B (PubMed:16415210).
messages: Subunit of the 26S proteasome which plays a role in ubiquitin-dependent proteolysis.

3702:AT5G25800
gene id: 3702:AT5G25800
uniprot id: Q8L7M4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the REXO1/REXO3 family.
messages: Nucleus
messages: Probable 3'-5' exonuclease degrading single-stranded small RNAs.

3702:AT2G18470
gene id: 3702:AT2G18470
uniprot id: Q9ZNQ8
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Activated by ABA and Ca(2+).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By ABA.
messages: Cell membrane
messages: Decreased sensitivity to ABA with respect to seed germination, seedling growth and primary root tip elongation. Impaired cytoplasmic Ca(2+) accumulation in response to ABA.
messages: Mostly expressed in inflorescence bolts. Also present in roots, stems, germinated seeds, cotyledons, pollen, stamen and stigma.
messages: Required during abscisic acid (ABA)-mediated activation of Ca(2+) channels. Regulates ABA signaling pathways. Modulates the expression of genes related to cell elongation and ABA signaling during root growth.

3702:AT3G27270
gene id: 3702:AT3G27270
uniprot id: A0A1I9LNG5
uniprot id: A0A384KN64
uniprot id: Q9LK26
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G43200
gene id: 3702:AT2G43200
uniprot id: A0A178VWQ6
uniprot id: Q9ZW75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G55060
gene id: 3702:AT1G55060
uniprot id: Q3E7K8
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT5G67220
gene id: 3702:AT5G67220
uniprot id: A0A178U7R5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G23945
gene id: 3702:AT2G23945
uniprot id: Q8S8N7
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT5G16760
gene id: 3702:AT5G16760
uniprot id: A0A178U6K3
uniprot id: Q9SBA5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the ITPK1 family.
messages: Binds 2 magnesium ions per subunit.
messages: Expressed in siliques.
messages: Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3.
messages: Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. Phosphorylates Ins(3,4,5,6)P4 at position 1 to form Ins(1,3,4,5,6)P5. This reaction is thought to have regulatory importance, since Ins(3,4,5,6)P4 is an inhibitor of plasma membrane Ca(2+)-activated Cl(-) channels, while Ins(1,3,4,5,6)P5 is not (By similarity). Also phosphorylates Ins(1,3,4)P3 on O-5 and O-6 to form Ins(1,3,4,6)P4, an essential molecule in the hexakisphosphate (InsP6) pathway (PubMed:9126335).
messages: Low inositol hexakisphosphate (phytate) levels in seed tissue.
messages: Monomer.

3702:AT1G12890
gene id: 3702:AT1G12890
uniprot id: A0A178W8Q4
uniprot id: Q3E703
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G05920
gene id: 3702:AT1G05920
uniprot id: Q5RM09
names: Subcellular Location Annotation
messages: Nucleus

3702:AT2G27350
gene id: 3702:AT2G27350
uniprot id: Q9XIP2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase C85 family.
messages: Cytoplasm
messages: Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (PubMed:21690391, PubMed:24659992). Binds chromatin (e.g. nucleosomes and histones) and has enzymatic histone deubiquitinase activity, specific for the H2B histone (PubMed:21690391, PubMed:28703681). Can both repress (e.g. OSR2) and promote (e.g. AN3) the expression of target genes by associating with chromatin, deubiquitinating H2B and regulating its euchromatic histone marks (e.g. H3ac and H3K4me) (PubMed:28703681). In association with LDL1/KDM1C, involved in transcriptional gene repression via histone deubiquitination and demethylation (PubMed:21690391). Promotes the concerted epigenetic regulation and repression (e.g. the removal of euchromatic histone acetylation, ubiquitination, and methylation marks) of a set of genes (e.g. GA20OX, WUS, OSR2, ARL and ABI5) that collectively limit plant growth thus stimulating plant growth and increasing cell size (PubMed:27999174).
messages: Interacts with KDM1C.
messages: Mostly expressed in stems flowers and siliques, and, to a lower extent, in leaves, roots and seedlings.
messages: Nucleus
messages: Up-regulated expression of GLP2A/GLP5A due to derepression associated with H2B hyperubiquitination of the target chromatin and H3K4 hypermethylation (PubMed:21690391). Abnormal hallmarks of euchromatin including H3 hyperacetylation, H2B monoubiquitination and H3K4 trimethylation in the gene encoding OSR2 leading to its increased expression (PubMed:27999174). Repressed expression of the AN3 gene associated with epigenetic modification (e.g. H2B hyperubiquitination and reduced H3ac and H3K4me) of its chromatin (PubMed:28703681).

3702:AT1G26100
gene id: 3702:AT1G26100
uniprot id: A0A178W422
uniprot id: Q9C540
names: Cofactor
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Binds 2 heme b groups non-covalently.
messages: Homodimer.
messages: Membrane
messages: Two-heme-containing cytochrome. May catalyze ascorbate-dependent trans-membrane ferric-chelate reduction (By similarity).

3702:AT3G28600
gene id: 3702:AT3G28600
uniprot id: A0A1I9LN06
uniprot id: F4J0C0
names: Induction
names: Similarity
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Induced in roots by salt stress.

3702:AT1G62360
gene id: 3702:AT1G62360
uniprot id: A0A178WBW0
uniprot id: Q38874
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/KNOX homeobox family.
messages: Cell membrane
messages: Cytoplasm
messages: Endosome
messages: Expressed in all four types of shoot apical meristems (SAM) i.e. in vegetative, axillary, inflorescence and floral.
messages: First expressed in early to mid-globular-stage embryos. In late globular stage, detected as a stripe running medially across the top of the embryo. In heart stage embryo, expression is restricted to a notch between the cotyledons, in both hypodermal and protoderm cells. In the bending-cotyledon stage, localized in the SAM, but disappears from the boundary region of cotyledon margins (BCM). In seedlings and adult plants found in all shoot apical meristems. In the inflorescence meristem, expression disappears as floral buds are initiated and reappears in the later floral meristem where it is found in the central portion of the developing gyneocium. Also detected in the L1 layer of embryo.
messages: Forms homodimers (PubMed:17965274). May form heterodimeric complexes with TALE/BELL proteins BEL1, BLH2, BLH3, BLH8/PNF, BLH9/PNY and ATH1. Interacts with CCT8 (PubMed:21868675). Binds to MBP2C; this interaction reduces RNA binding capacity (PubMed:17965274). Interacts with FTIP3 and FTIP4 (PubMed:29742441).
messages: Nucleus
messages: Required for shoot apical meristem (SAM) formation during embryogenesis. Negatively regulates ASYMMETRIC LEAVES1 (AS1) and ASYMMETRIC LEAVES2 (AS2 or LBD6). Probably binds to the DNA sequence 5'-TGAC-3'. Binds to RNA (By similarity).
messages: plasmodesma

3702:AT1G60710
gene id: 3702:AT1G60710
uniprot id: Q93ZN2
names: Caution
names: Induction
names: Similarity
messages: Belongs to the aldo/keto reductase family.
messages: Reported as ATB2 in TAIR. The origin of the name is unclear and this protein should not be mixed with bZIP family protein ATB2.
messages: Up-regulated by iron and sulfur starvation.

3702:AT3G08850
gene id: 3702:AT3G08850
uniprot id: A0A178V9S6
uniprot id: Q93YQ1
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WD repeat RAPTOR family.
messages: Cytoplasm
messages: Embryonic lethality when homozygous. Embryo development arrested at very early stage (early pre-globular stage), leading to aborted shrunken seeds. Constitutive autophagy (PubMed:27545962).
messages: Expressed in roots, leaves, flowers and seeds.
messages: Interacts with TOR, ATPK1 and ML1. Interacts with KIN10 (PubMed:27545962).
messages: Phosphorylated by KIN10.
messages: Probable component of the plant TOR kinase pathway that recruits substrates for TOR. Modulates plant cell growth and regulates the activity of ATPK1 kinase in response to osmotic stress.

3702:AT5G20640
gene id: 3702:AT5G20640
uniprot id: A0A7G2F927
uniprot id: A0MFH4
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

3702:AT4G12600
gene id: 3702:AT4G12600
uniprot id: F4JRD3
uniprot id: Q9SU26
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic ribosomal protein eL8 family.
messages: Common component of the spliceosome and rRNA processing machinery.
messages: nucleolus

3702:AT2G06020
gene id: 3702:AT2G06020
uniprot id: Q9ZPZ8
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G11710
gene id: 3702:AT5G11710
uniprot id: A0A654G0G8
uniprot id: Q8VY07
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the epsin family.
messages: Cytoplasm
messages: Defect in vacuolar trafficking.
messages: Golgi apparatus
messages: Interacts with clathrin, VTI11, GAMMA-ADR and VSR1. Binds to the deubiquitinating enzyme AMSH3.
messages: May have a role in transport via clathrin-coated vesicles from the trans-Golgi network to endosomes. Stimulates clathrin assembly (By similarity). Does not seem to bind to phospholipids. Plays an important role in the vacuolar trafficking of soluble cargo proteins at the trans-Golgi network.
messages: Mostly expressed in cotyledons and flowers, and, to a lower extent, in roots, leaves and siliques (at protein level).
messages: Prevacuolar compartment
messages: Vesicle
messages: clathrin-coated vesicle
messages: cytoskeleton

3702:AT1G58200
gene id: 3702:AT1G58200
uniprot id: A0A7G2E1T4
uniprot id: Q8L7W1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer. Controls plastid size, shape, and perhaps division during normal plant development by altering ion flux in response to changes in membrane tension. Acts as a component of the chloroplast division machinery.
messages: Membrane
messages: Msl2 and msl3 double mutant shows abnormalities in the size and shape of plastids with enlarged chloroplasts containing multiple FtsZ rings.
messages: Widely expressed.
messages: chloroplast membrane

3702:AT5G62070
gene id: 3702:AT5G62070
uniprot id: A0A178UJA3
uniprot id: Q9FIT1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IQD family.
messages: Binds to multiple calmodulin (CaM) in the presence of Ca(2+) and CaM-like proteins.
messages: Cell membrane
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity).
messages: May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (By similarity). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
messages: Nucleus
messages: cytoskeleton
messages: nucleolus

3702:AT3G04670
gene id: 3702:AT3G04670
uniprot id: A0A654F437
uniprot id: B9DG02
uniprot id: Q9SR07
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT5G46874
gene id: 3702:AT5G46874
uniprot id: Q2V310
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G51330
gene id: 3702:AT5G51330
uniprot id: Q9FGN8
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Meiocytes (at protein level).
messages: Nucleus
messages: Plants contain 2 cells with prominent nuclei in the central region of the ovule where the embryo sac is normally located. Sometimes, an unreduced diploid female gamete, arising from apomeiosis, can be fertilized by a haploid male gamete, leading to a viable triploid embryo.
messages: Required for fertility. Involved in chromatid cohesion establishment, in chromosome structure during male and female meiosis (e.g. the synapse formation between homologous chromosomes, the recombination, and the cohesion of both chromatid arm and centromere), and in axial element formation. Regulates the switch from mitosis to the reductional meiosis division of megaspores prior to the female gametogenesis (megasporogenesis).

3702:AT5G60142
gene id: 3702:AT5G60142
uniprot id: Q9LST3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G18620
gene id: 3702:AT3G18620
uniprot id: A0A178V949
uniprot id: Q9LIH7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Membrane
messages: S-acyltransferase involved in protein lipid modification.
messages: The DHHC domain is required for palmitoyltransferase activity.
messages: Vacuole membrane

3702:AT1G51890
gene id: 3702:AT1G51890
uniprot id: C0LGG6
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Transiently by pathogenic bacteria Pseudomonas syringae. Faster level reduction following induction by treatment with the virulent compatible DC3000 strain than with avirulent incompatible strains.

3702:AT5G14740
gene id: 3702:AT5G14740
uniprot id: A0A178UT81
uniprot id: A8MQY4
uniprot id: F4K873
uniprot id: F4K875
uniprot id: P42737
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the beta-class carbonic anhydrase family.
messages: Expression reduced by 20% under dark conditions.
messages: Reversible hydration of carbon dioxide.
messages: Reversible hydration of carbon dioxide. This isoform ensures the supply of bicarbonate for pep carboxylase.
messages: Strongly expressed in aerial tissues including leaves, stems, flowers and siliques. Accumulates in mesophyll cells.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast
messages: cytosol

3702:AT1G60590
gene id: 3702:AT1G60590
uniprot id: O22699
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G50670
gene id: 3702:AT5G50670
uniprot id: B9DI20
uniprot id: P0DI11
names: Cofactor
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Binds 2 Zn(2+) ions per subunit.
messages: Negatively regulated by microRNAs miR156 and miR157.
messages: Nucleus
messages: The SBP-type zinc finger is required for the binding to DNA.
messages: Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.
messages: Weak increase of expression during floral induction.

3702:AT4G19330
gene id: 3702:AT4G19330
uniprot id: O65704
names: Function
messages: Involved in seed germination.

3702:AT2G20520
gene id: 3702:AT2G20520
uniprot id: A0A178VP93
uniprot id: Q9SIL7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fasciclin-like AGP family.
messages: Cell membrane
messages: May be a cell surface adhesion protein.
messages: Membrane

3702:AT3G18600
gene id: 3702:AT3G18600
uniprot id: A0A178V8H1
uniprot id: Q9LIH9
names: Domain
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX18/HAS1 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.

3702:AT1G20870
gene id: 3702:AT1G20870
uniprot id: Q9SYQ0
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Acts as an anti-silencing factor that prevents DNA hypermethylation and gene repression (PubMed:25684209).
messages: Interacts with MBD7 (via C-terminus), IDM1 and IDM2 (PubMed:25684209). Part of a complex made of MBD7, IDM1, IDM2 and IDM3 (PubMed:25684209).
messages: Not regulated by heat.
messages: Nucleus

3702:AT5G45600
gene id: 3702:AT5G45600
uniprot id: Q9FH40
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the YAF9 family.
messages: Component of the TFIID complex. TFIID is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs) whose MWs range from 14-217 kDa. Interacts with TAF1, TAF4B and TAF12B. Component of the SWR1 chromatin-remodeling complex. Interacts with FLX, a component of the transcription activator complex FRI-C (PubMed:17340043, PubMed:21282526). Interacts with SWC4, and with EAF1A and EAF1B (via HSA domain) (Ref.9).
messages: Cytoplasm
messages: Expressed in roots, leaves, inflorescence and flowering tissues.
messages: Negative regulator of flowering controlling the H4K5 acetylation levels in the FLC and FT chromatin. Positively regulates FLC expression. Component of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of a NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A.
messages: No visible phenotype, due to the redundancy with TAF14. Modest early flowering. Taf14 and taf14b double mutants show a pleiotropic phenotype that includes small size and abnormal leaf morphology (PubMed:21282526, PubMed:23017898). Taf14 and taf14b double mutants show a reduced H4K5 acetylation in the promoter region of major flowering regulator genes including FLC, CO and SOC1, and a more pronounced early flowering (Ref.9).
messages: Nucleus

3702:AT5G22480
gene id: 3702:AT5G22480
uniprot id: A0A178UA90
uniprot id: F4K9W6
names: Caution
names: Similarity
messages: Belongs to the ZPR1 family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G07020
gene id: 3702:AT5G07020
uniprot id: Q9FL44
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Altered photosystem II (PSII) function under high-irradiance light (PubMed:25846821). Elevated photodamage to PSII reaction center proteins after high-light treatment (PubMed:26337456).
messages: Interacts with photosystem II (PSII) core complexes and participates in the maintenance of normal PSII activity under photoinhibitory stress. May protect against photodamage or stabilize PSII under high-light stress (PubMed:25846821). Participates in the maintainance of proper PSII function under high-light stress by protecting PSII from photooxidative damage (PubMed:26337456).
messages: Interacts with psbA, psbB, psbC and psbD.
messages: chloroplast thylakoid membrane

3702:AT1G70300
gene id: 3702:AT1G70300
uniprot id: Q8W4I4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
messages: Cell membrane
messages: Probable potassium transporter.

3702:AT2G31460
gene id: 3702:AT2G31460
uniprot id: Q9SIC3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G67570
gene id: 3702:AT1G67570
uniprot id: A0A178WCI4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G71450
gene id: 3702:AT1G71450
uniprot id: A0A5S9WRG2
uniprot id: Q9C9I2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT1G30060
gene id: 3702:AT1G30060
uniprot id: A0A178WD50
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G58530
gene id: 3702:AT5G58530
uniprot id: A0A178UBD7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G06790
gene id: 3702:AT3G06790
uniprot id: A0A178VJ70
uniprot id: Q84JZ6
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MORF family.
messages: Heterodimer with MORF1 (PubMed:22411807, PubMed:25583991). Homodimer and heterodimers with MORF8/RIP1, MORF4/RIP4 and MORF5/RIP5 (PubMed:25583991).
messages: Involved in organellar RNA editing. Required for the processing of RNA editing sites in mitochondria.
messages: Mitochondrion
messages: Retarded growth.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38040
gene id: 3702:AT2G38040
uniprot id: Q9LD43
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates in fatty acids synthesizing tissues such as embryos, expanding leaves, flower buds, flowers, and developing siliques.
messages: Acetyl-CoA carboxylase is a heterohexamer composed of biotin carboxyl carrier protein, biotin carboxylase and two subunits each of ACCase subunit alpha and ACCase plastid-coded subunit beta (accD).
messages: Belongs to the AccA family.
messages: Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA (By similarity).
messages: chloroplast inner membrane

3702:AT4G19010
gene id: 3702:AT4G19010
uniprot id: Q84P24
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Both substrate-binding domains (SBD1 and SBD2) are involved in the substrate recognition, and are sufficient to confer the substrate specificity.
messages: Cannot use 4-coumarate for ubiquinone biosynthesis.
messages: Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors (PubMed:18267944). Acts as a carboxylate--CoA ligase that can use preferentially p-coumarate, ferulate and caffeate as substrates and, with a lower efficiency, (E)-cinnamate and 4-hydroxybenzoate as substrates (PubMed:24838974). Involved in the biosynthesis of ubiquinone from phenylalanine by activating the propyl side chain of 4-coumarate, and possibly trans-cinnamate and 4-hydroxybenzoate, for subsequent beta-oxidative shortening and the formation of the benzenoid moiety of ubiquinone (PubMed:24838974). Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioester (By similarity).
messages: Expressed at very low level in leaves.
messages: Peroxisome

3702:AT3G04530
gene id: 3702:AT3G04530
uniprot id: Q93VK0
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Calcium-independent kinase involved in light-dependent phosphoenolpyruvate carboxylase phosphorylation.
messages: Expressed in flowers and roots, and at lower levels in cauline leaves. Barely detectable in rosette leaves and stems.
messages: Lacks the autoinhibitory region and EF hands found in calcium-dependent protein kinases.
messages: Up-regulated by light, cycloheximide, phosphate starvation, carbon availability and high pH. Down-regulated by phosphate and phosphite. Very high sensitivity to phosphate at low pH. Not under circadian control and not affected by nitrogen supply.

3702:AT1G67775
gene id: 3702:AT1G67775
uniprot id: Q2V4E2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate (PubMed:16407446). Represses root apical meristem maintenance (PubMed:16902140). Positively regulates the expression of the transcription factor WOX8 and thus, regulates early embryo development (PubMed:22427333). Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
messages: Mostly expressed in siliques, and, to a lower extent, in flowers (PubMed:12602871). Expressed in young embryos and endosperm (PubMed:22427333).
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-67 enhances binding affinity of the CLE8p peptide for its receptor.
messages: extracellular space

3702:AT1G02450
gene id: 3702:AT1G02450
uniprot id: A0A178WC43
uniprot id: Q9FNZ5
names: Caution
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NPR1-interactor family.
messages: By salicylic acid (SA) and BTH.
messages: Interacts with NPR1.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G33520
gene id: 3702:AT4G33520
uniprot id: F4JIZ4
uniprot id: Q9SZC9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
messages: Expressed in the shoots and roots.
messages: High-chlorophyll-fluorescence phenotype. Short roots.
messages: Mediates copper transfer across the plastid envelope. Required for the delivery of copper into the plastid stroma, which is essential for the function of copper proteins. Seems to be selective for monovalent copper Cu(+) transport. Also plays a role in glucose signaling-mediated cell proliferation of root meristem in non-green tissues.
messages: Membrane
messages: chloroplast membrane

3702:AT5G26600
gene id: 3702:AT5G26600
uniprot id: Q3E6S9
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
messages: Identified as a putative plastidic SufS-like protein and thus called CpNifS3 (PubMed:18978034). However, it seems to be more related to L-cysteine desulfhydrase.
messages: Interacts in vitro with QS (PubMed:18978034).
messages: May catalyze the production of hydrogen sulfide (H2S) from cysteine.
messages: chloroplast

3702:AT5G25380
gene id: 3702:AT5G25380
uniprot id: A0A1P8BH20
uniprot id: A0A1P8BH26
uniprot id: Q39071
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: By auxin in the roots, cytokinin in the shoot apex and sucrose in suspension cell culture. Down-regulated by salt stress in root meristem and shoot apex.
messages: Expressed in tissues with active cell division: apical root and shoot meristems, lateral root and leaf primordia, floral meristems and developing pollen.
messages: May negatively regulate endocycles and act as a regulator of ploidy levels in endoreduplication.
messages: Starts to be expressed during S phase with a maximum just before the G2-to-M boundary and disappears in the metaphase of mitosis. Expressed during embryogenesis in the ovule, integuments, egg cell and synergids, and in the embryo up to late-torpedo stage. Expressed during germination in the root apical meristem, shoot apical meristem, vascular bundles of the cotyledons and vascular cylinder of the roots up to lateral roots emergence. Expressed during flowering in the caulines leaves, peduncle, sepals of flower buds, early expanded petals, ovary, placenta, funiculi, devoloping ovules, pollen connective tissues, tapetum, endothecium, epidermis and developing pollen grains.

3702:AT4G13300
gene id: 3702:AT4G13300
uniprot id: Q9T0K1
names: Cofactor
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the terpene synthase family. Tpsa subfamily.
messages: Binds 3 Mg(2+) or Mn(2+) ions per subunit.
messages: By wounding.
messages: Cytoplasm
messages: Involved in sesquiterpene (C15) biosynthesis. The major product is (Z)-gamma-bisabolene with minor amounts of (E)-nerolidol and alpha-bisabolol.
messages: Predominantly expressed in roots. Expressed in the cortex and the sub-epidermal layers of roots. Also detected in leaf hydathodes and flower stigmata.
messages: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+).

3702:AT4G02260
gene id: 3702:AT4G02260
uniprot id: A0A178V4B7
uniprot id: A0A178V5K1
uniprot id: A0A1P8B8U7
uniprot id: F4JHA2
uniprot id: F4JHA4
uniprot id: P0DKG8
names: Caution
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RelA/SpoT family.
messages: Circadian-regulation with a peak at dusk. Down-regulated by wounding and 12-oxo-phytodienoic acid (OPDA).
messages: Expressed in hypocotyls, shoots, cotyledons, rosette leaves, sepals and pistils.
messages: In the ecotype Landsberg erecta, RSH1 (AC P0DKG8) has been shown to interact with RPP5 (AC O04264).
messages: Interacts with RPP4 (PubMed:11846877). Interacts with RPP5 (PubMed:10725385, PubMed:11846877).
messages: Interacts with RPP5.
messages: May be involved in a rapid plant ppGpp (guanosine 3'-diphosphate 5'-diphosphate)-mediated response to pathogens and other stresses (By similarity). Unable to functionally complement E.coli relA mutants.
messages: May be involved in a rapid plant ppGpp (guanosine 3'-diphosphate 5'-diphosphate)-mediated response to pathogens and other stresses.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT3G28480
gene id: 3702:AT3G28480
uniprot id: A0A178VMI2
uniprot id: A0A5S9XGX9
uniprot id: F4J0A6
uniprot id: Q8L970
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P4HA family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT2G03060
gene id: 3702:AT2G03060
uniprot id: F4IS82
uniprot id: Q1PFA4
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in pollen.
messages: Forms heterodimers with AGL66 and AGL104.
messages: Nucleus
messages: Probable transcription factor that forms heterodimers with the MADS-box proteins AGL66 and AGL104 and is involved in the regulation of pollen maturation at the late stages of pollen development and pollen tube growth.

3702:AT2G01755
gene id: 3702:AT2G01755
uniprot id: A0A178W0C2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G06580
gene id: 3702:AT5G06580
uniprot id: Q94AX4
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
messages: Binds 1 FAD per monomer.
messages: By light.
messages: Catalyzes the stereospecific oxidation of D-lactate to pyruvate. Involved in the detoxification of methylglyoxal and D-lactate, but probably not involved in the metabolization of glycolate.
messages: Expressed in leaves, stems, flowers and roots.
messages: Homodimer.
messages: Inhibited by cyanide ions.
messages: Mitochondrion
messages: No visible phenotype when grown under standard conditions, but developmental retardation and lethality when grown in presence of methylglyoxal or D-lactate.

3702:AT3G55220
gene id: 3702:AT3G55220
uniprot id: A0A178VN71
uniprot id: P0DKL4
uniprot id: P0DKL6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RSE1 family.
messages: Expressed at low levels in roots, leaves, inflorescence and, to a lower extent, in siliques.
messages: Expressed in roots, leaves, inflorescence and, to a lower extent, in siliques.
messages: Identified in the spliceosome C complex. Component of the U11/U12 snRNPs that are part of the U12-type spliceosome. Component of splicing factor SF3B complex.
messages: Nucleus
messages: Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron (By similarity). Required for pollen and ovule development, especially during the transition from microspore to the bicellular stage in pollen development. Involved in the accumulation of QRT1 and QRT3 (PubMed:21680607).
messages: The double mutant sap130a sap130b displays a slight reduction in the size of aerial organs and in the number of lateral roots, and is impaired in reproduction due to a reduced production of viable pollen and impaired female reproductive organs. Defect in the transition from microspore to the bicellular stage in pollen development. Reduced expression of QRT1 and QRT3.

3702:AT3G09810
gene id: 3702:AT3G09810
uniprot id: A0A178V9M1
uniprot id: Q8LG77
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: Catalytic subunit of the NAD(+)-dependent isocitrate dehydrogenase involved in the oxidative decarboxylation of isocitrate to 2-oxoglutarate (Probable). Performs an essential role in the oxidative function of the citric acid cycle.
messages: Heterooligomer of catalytic and regulatory subunits.
messages: Mitochondrion
messages: Ubiquitous. Predominantly expressed in leaves.

3702:AT5G61270
gene id: 3702:AT5G61270
uniprot id: A0A178UKL9
uniprot id: C0SVV2
uniprot id: Q570R7
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Barely detectable in dark-grown seedlings. Induced after 2 hours of light exposure.
messages: By red light. Stable upon light exposure.
messages: Expressed in flowers.
messages: Homodimer (Probable). Interacts specifically with the Pfr form of phytochrome B.
messages: Not phosphorylated upon light exposure.
messages: Nucleus
messages: Plants are hypersensitive to red light, exhibiting shorter hypocotyls and larger cotyledons.
messages: The Gln-rich domain in the C-terminal region functions to modulate the transcriptional activity of BHLH72/PIF7.
messages: The active phytochrome binding (APB) motif (3-17) is involved in interaction with PHYB.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor acting negatively in the phytochrome B signaling pathway under prolonged red light. Regulates PHYB abundance at the post-transcriptional level, possibly via the ubiquitin-proteasome pathway. May regulate the expression of a subset of genes by binding to the G-box motif.

3702:AT5G14250
gene id: 3702:AT5G14250
uniprot id: Q8W575
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CSN3 family.
messages: Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of IAA6 by regulating the activity of the Ubl ligase SCF-TIR complex.
messages: Component of the CSN complex, probably composed of CSN1, CSN2, CSN3, CSN4, CSN5 (CSN5A or CSN5B), CSN6 (CSN6A or CSN6B), CSN7 and CSN8. In the CSN complex, it probably interacts directly with CSN1, CSN4, CSN6 and CSN8. Interacts with COP10.
messages: Cytoplasm
messages: Nucleus

3702:AT5G03370
gene id: 3702:AT5G03370
uniprot id: A0A654FXY8
uniprot id: Q9LZF2
names: Similarity
messages: Belongs to the acylphosphatase family.

3702:AT2G23000
gene id: 3702:AT2G23000
uniprot id: A0A178VYK6
uniprot id: O64810
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in senescent leaves.
messages: In cv. Pna-10, this protein SCP10 and the adjacent SCP8 are not present due to a natural 13-kb deletion (PubMed:19969522).
messages: Involved in the biosynthesis of sinapoylated anthocyanins.
messages: Lack of sinapoylated anthocyanins.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Was classified as a serine carboxypeptidase-like (SCPL) protein solely on the basis of the overall sequence similarity (PubMed:15908604) but it has been shown that it belongs to a class of enzymes that catalyze acyltransferase reactions (PubMed:17600138).

3702:AT3G45860
gene id: 3702:AT3G45860
uniprot id: A0A654FF15
uniprot id: Q9LZU4
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CRK subfamily.
messages: By salicylic acid (SA) or by a bacterial pathogen infection.
messages: Membrane

3702:AT3G48690
gene id: 3702:AT3G48690
uniprot id: Q9SMN0
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in leaves, stems, flowers and siliques.

3702:AT3G20730
gene id: 3702:AT3G20730
uniprot id: Q9LT48
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT3G48730
gene id: 3702:AT3G48730
uniprot id: A0A178VHC7
uniprot id: Q42522
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
messages: Can use both pyridoxamine 5'-phosphate (PMP) and pyridoxal 5'-phosphate (PLP) as cofactors.
messages: Expressed in leaf primordia and shoot apical meristems (SAM).
messages: Homodimer.
messages: Suppresses partially the ENF1 disruption pleiotropic developmental phenotypes, including the suppression of the abnormal patterning of the adaxial-abaxial-related gene expression in leaf primordia.
messages: Transaminase converting glutamate 1-semialdehyde (GSA) to 5-aminolevulinate (ALA). Involved in the biosynthesis of tetrapyrroles.
messages: chloroplast

3702:AT4G18170
gene id: 3702:AT4G18170
uniprot id: A0A178V3M3
uniprot id: Q8VWJ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-c family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT3G01290
gene id: 3702:AT3G01290
uniprot id: Q9SRH6
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: Self-interacts and forms heteromers. Interacts with NB-LRR class of R proteins before R proteins (e.g. RPS2 or RPM1) are activated by the effectors.

3702:AT2G38650
gene id: 3702:AT2G38650
uniprot id: A0A1P8AX74
uniprot id: A0A384KW14
uniprot id: Q9ZVI7
uniprot id: W8Q6X1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 8 family.
messages: Expressed in roots, inflorescences, flowers, siliques, leaves and stems.
messages: Golgi apparatus membrane
messages: May be involved in pectin biosynthesis.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G07300
gene id: 3702:AT1G07300
uniprot id: A0A178WHQ4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G18780
gene id: 3702:AT4G18780
uniprot id: A0A068FHR7
uniprot id: A0A654FQM6
uniprot id: Q8LPK5
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening.
messages: Cell membrane
messages: Confined to secondary cell wall developing tissues such as xylems and interfascicular regions. Expressed in young plants, stems, flowers and inflorescences, but not in leaves.
messages: Enhanced resistance to the pathogens Ralstonia solanacearum and Plectosphaerella cucumerina.
messages: Interacts with CESA4 and CESA7. Assembly with CESA4 and CESA7 is required for functional complex and localization in secondary cell wall deposition sites. Interacts with STL1 and STL2, but not with GOT1 (PubMed:27277162).
messages: Membrane
messages: Not found in embryos. Increasing amount as stems mature.
messages: S-acylated.

3702:AT2G46310
gene id: 3702:AT2G46310
uniprot id: A0A5S9X7G6
uniprot id: O82339
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: By cytokinins.
messages: Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
messages: Cytoplasm
messages: Nucleus

3702:AT1G42470
gene id: 3702:AT1G42470
uniprot id: F4I9G5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the patched family.
messages: Membrane

3702:AT4G29570
gene id: 3702:AT4G29570
uniprot id: A0A5S9XX09
uniprot id: Q9XEX4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Binds 1 zinc ion per subunit.
messages: Homodimer.
messages: This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

3702:AT2G43370
gene id: 3702:AT2G43370
uniprot id: Q8VY74
names: Function
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Has no effect on the assembly of the protein into snRNP, but reduces the affinity for SR proteins.
messages: May facilitate 5' splice site recognition in the minor spliceosome. May be involved in interactions with components of the major spliceosome bound to the pyrimidine tract of an upstream U2-type intron.
messages: Nucleus speckle
messages: Part of the U11 snRNP, a component of the minor U12-type spliceosome. U11 and U12 snRNPs exist not only as monoparticles but also as a preformed U11/U12 di-snRNP complex. Interacts with CYP95, SCL28, SCL30, SCL30A, SCL33, SC35, SR30, SR34, RS31, RS40, RSZ21 and RS2Z33.
messages: Phosphorylated.
messages: Ubiquitous.

3702:AT1G04630
gene id: 3702:AT1G04630
uniprot id: A0A178W1J5
uniprot id: Q8RWA7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
messages: Belongs to the complex I NDUFA13 subunit family.
messages: Complex I functions in the transfer of electrons from NADH to the respiratory chain. Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis.
messages: Complex I is composed of at least 49 different subunits.
messages: Mitochondrion inner membrane

3702:AT5G65990
gene id: 3702:AT5G65990
uniprot id: Q9FKY3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.8) subfamily.
messages: Translocates preferentially neutral amino acids and to a lesser extent aromatic amino acids from the vacuole to the cytoplasm. Requires ATP for function.
messages: Ubiquitous.
messages: Vacuole membrane

3702:AT2G21880
gene id: 3702:AT2G21880
uniprot id: Q9SJ11
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Intracellular vesicle trafficking and protein transport.

3702:AT5G20740
gene id: 3702:AT5G20740
uniprot id: Q84WE4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Down-regulated in leaves during infection with Botrytis cinerea.
messages: Expressed in apical meristem.
messages: Pectin methylesterase (PME) inhibitor that regulates de-methylesterification of pectins in the apical meristem and affects primordia formation and phyllotactic patterning.
messages: apoplast

3702:AT4G13440
gene id: 3702:AT4G13440
uniprot id: A0A384KVA6
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G60040
gene id: 3702:AT5G60040
uniprot id: A0A5S9YGT2
uniprot id: F4JXF8
uniprot id: F4JXF9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family.
messages: Component of the RNA polymerase III (Pol III) complex consisting of 17 subunits.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. Forms the polymerase active center together with the second largest subunit. A single-stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol III. A bridging helix emanates from NRPC1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol III by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition.
messages: Nucleus

3702:AT4G38380
gene id: 3702:AT4G38380
uniprot id: A0A1P8B902
uniprot id: A0A1P8B921
uniprot id: A0A1P8B923
uniprot id: A0A5S9XZR1
uniprot id: Q9SVE7
names: Caution
names: Disruption Phenotype
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: No reduction in aluminum tolerance.
messages: Not induced by aluminum.
messages: Ubiquitous.
messages: chloroplast membrane

3702:AT1G42970
gene id: 3702:AT1G42970
uniprot id: A0A5S9WM95
uniprot id: P25857
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
messages: Expressed in leaves and stems.
messages: Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3-diphosphoglycerate by NADPH (By similarity).
messages: Plants contain three types of GAPDH: NAD-dependent cytosolic forms which participate in glycolysis, NAD-dependent chloroplastic forms which participate in plastidic glycolysis and NADP-dependent chloroplastic forms which participate in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). All the forms are encoded by distinct genes.
messages: Repressed by darkness and sucrose.
messages: Tetramer of either four A chains (GAPDH 2) or two A and two B chains (GAPDH 1).
messages: chloroplast membrane
messages: chloroplast stroma

3702:AT5G41820
gene id: 3702:AT5G41820
uniprot id: Q9FJ32
names: Activity Regulation
names: Function
names: Similarity
names: Subunit
messages: Belongs to the protein prenyltransferase subunit alpha family.
messages: Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2 (By similarity). Does not seem to be a functional Rab-GGT alpha subunit in vitro (PubMed:26589801).
messages: Heterotrimer composed of the alpha subunit RGTA, the beta subunit RGTB and REP; within this trimer, RGTA and RGTB form the catalytic component, while REP mediates peptide substrate binding.
messages: The enzymatic reaction requires the aid of the Rab escort protein REP.

3702:AT5G13790
gene id: 3702:AT5G13790
uniprot id: A0A178U9X9
uniprot id: A0A178UBU5
uniprot id: A0A384LKZ8
uniprot id: Q38847
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By auxin (2,4-D). Feedback loop leading to direct down-regulation by itself.
messages: Cytoplasm
messages: During the reproductive phase, accumulates in immature buds and at the base of the floral organs, and in the receptacle, ovules, anther filaments, and stigma and style of open flowers. Accumulates before fertilization in the cytoplasm in the cells of the egg apparatus and moves into the nucleus during early stages of development following fertilization in the suspensor, embryo, and endosperm, mainly double fertilization derived tissues (at protein level). Highly expressed in developing embryos. In young seedlings, present in the shoot and root apices, lateral root primordia and throughout the vascular system.
messages: Early flowering under short-days conditions (SD) when combined with AGL18 disruption. Decreased ability to produce somatic embryos in vitro.
messages: Expressed at low levels in flowers and siliques. Also present in seedlings. Detected during embryogenesis and accumulates during early seed development (at protein level). Expressed in shoot apices and the base of leaf petioles.
messages: Homodimer. Interacts with SVP, AGL24, AP1, AGL6, AG, AGL1, AGL11, AGL5, AGL16, SOC1 and AGL21.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcription factor involved in the negative regulation of flowering, probably through the photoperiodic pathway. Acts as both an activator and a repressor of transcription. Binds DNA in a sequence-specific manner in large CArG motif 5'-CC (A/T)8 GG-3'. Participates probably in the regulation of programs active during the early stages of embryo development. Prevents premature perianth senescence and abscission, fruits development and seed desiccation. Stimulates the expression of at least DTA4, LEC2, FUS3, ABI3, AT4G38680/CSP2 and GRP2B/CSP4. Can enhance somatic embryo development in vitro.

3702:AT1G15570
gene id: 3702:AT1G15570
uniprot id: A0A178WNJ4
uniprot id: Q38819
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cyclin family.
messages: Belongs to the cyclin family. Cyclin AB subfamily.
messages: Interacts with CDKA-1 (PubMed:16415207). Interacts with SAMBA (PubMed:22869741).
messages: Negatively regulates endocycles and acts as a regulator of ploidy levels in endoreduplication (PubMed:16415207). Promotes divisions in the guard cells (GCs) after the guard mother cells (GMC) symmetric division (PubMed:24687979).
messages: Nucleus
messages: Repressed by MYB88 and MYB124 in newly formed guard cells.

3702:AT2G41890
gene id: 3702:AT2G41890
uniprot id: P93756
names: Domain
names: Subcellular Location Annotation
messages: Cell membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT3G54690
gene id: 3702:AT3G54690
uniprot id: A0A178VFX5
uniprot id: Q9M1T1
names: Function
names: Similarity
messages: Belongs to the SIS family. GutQ/KpsF subfamily.
messages: Catalyzes the reversible aldol-ketol isomerization between D-ribulose 5-phosphate (Ru5P) and D-arabinose 5-phosphate (A5P).

3702:AT3G22425
gene id: 3702:AT3G22425
uniprot id: A0A178VKN0
uniprot id: P34047
names: Cofactor
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the imidazoleglycerol-phosphate dehydratase family.
messages: Binds 2 manganese ions per subunit.
messages: May be due to an intron retention.
messages: chloroplast

3702:AT4G00230
gene id: 3702:AT4G00230
uniprot id: A0A1P8B4Y8
uniprot id: Q9LLL8
names: PTM
names: Similarity
names: Tissue Specificity
messages: Belongs to the peptidase S8 family.
messages: Expressed only in roots, particularly in xylem.
messages: The C-terminal propeptide is autocleaved.

3702:AT2G23420
gene id: 3702:AT2G23420
uniprot id: A0A1P8AXW4
uniprot id: A0A5S9X0U8
uniprot id: Q84WV8
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
messages: Activity is highest with Mn(2+).
messages: Belongs to the NAPRTase family.
messages: Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Helps prevent cellular oxidative stress via its role in NAD biosynthesis.
messages: Transiently phosphorylated on a His residue during the reaction cycle. Phosphorylation strongly increases the affinity for substrates and increases the rate of nicotinate D-ribonucleotide production. Dephosphorylation regenerates the low-affinity form of the enzyme, leading to product release.
messages: Up-regulated in the quinolinate synthase mutant old5 causing increased NAD steady state levels.

3702:AT5G49660
gene id: 3702:AT5G49660
uniprot id: A0A178U894
uniprot id: Q9FGL5
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Defects in vascular organization and phloem differentiation in inflorescence stems, characterized by aberrant accumulation of highly lignified cells, typical of xylem or fiber cells, within the phloem, and phloem cells sometimes adjacent to xylem cells. Malformed vascular cells files, probably due to defects in oriented cell divisions or cell morphology, and leading to both phloem specification defects and disrupted xylem vessel formation. Short inflorescence stems and increased anthocyanin accumulation in leaves (PubMed:21853254). Reduced total lateral root density, due to a reduction in stage I and II lateral root primordia and, to a lower extent, to fewer emerged lateral roots. Impaired sensitivity to CEP5 with respect to root growth regulation (PubMed:27296247). Growth retardation accompanied with nitrogen (N)-deficiency symptoms. Slight enhanced lateral root elongation in simple mutant. The double mutant cepr1 cepr2 is insensitive to CEP1 in a root growth regulation and exhibit pleiotropic phenotype characterized by pale-green leaves and enhanced lateral root elongation. At adult stage, smaller rosette leaves and shorter floral stems, accompanied by anthocyanin accumulation. Down-regulation of genes involved in N uptake and assimilation pathways (e.g. NRT1.1, NRT2.1 and NRT3.1) leading to impaired nitrate uptake activity. Altered systemic induction of genes involved in N uptake and assimilation pathways in N-depletion conditions (PubMed:25324386).
messages: Expressed in the vasculature, especially in phloem and procambium regions, from the mature embryo stage through the adult plant (PubMed:21853254). Excluded from early stages of lateral root development (PubMed:27296247).
messages: Expressed in the vasculature, especially in phloem and procambium regions, of stems, leaves, cotyledons, sepals, pedals, pedicels, hypocotyls and roots (in primary and lateral roots, but not in root tips) (PubMed:21853254, PubMed:25324386). Expressed in the root from the basal meristem onward. Present in the phloem pole pericycle and in the adjacent phloem (PubMed:27296247).
messages: Interacts with the root-derived peptides CEP1, CEP3 and CEP5.
messages: Receptor kinase involved in the perception of C-terminally encoded plant signaling peptide (CEP) and subsequent regulation of root and shoot development (PubMed:25324386). Required for xylem and phloem cell files morphology and organization, probably by preventing ectopic lignification in phloem cells (PubMed:21853254). Together with CEPR2, mediates systemic nitrogen (N)-demand signaling upon the perception of root-derived peptides (e.g. CEP1) via the up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386). Regulates positively lateral root initiation and development; probably repressed by the signaling peptide CEP5 (PubMed:27296247).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G18700
gene id: 3702:AT2G18700
uniprot id: A0A5S9WZ33
uniprot id: Q9ZV48
names: Similarity
names: Tissue Specificity
messages: Expressed in leaves, roots, stems and flowers.
messages: In the C-terminal section; belongs to the trehalose phosphatase family.
messages: In the N-terminal section; belongs to the glycosyltransferase 20 family.

3702:AT5G46650
gene id: 3702:AT5G46650
uniprot id: Q9FIR0
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT5G65690
gene id: 3702:AT5G65690
uniprot id: A0A1P8BDT8
uniprot id: A0A1P8BDX2
uniprot id: B5X574
names: Activity Regulation
names: Cofactor
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Accumulates transiently in germinating seeds (at protein level) with a constant transcript level (PubMed:14671017, PubMed:17283014). Abundant in cotyledons during post-germinative growth and in sink tissues, such as young leaves, developing flowers, siliques and seeds (at protein level) (PubMed:17283014). In flowers, present in the nectaries, stigma, endocarp of the fruit wall and in tissues involved in the transfer of assimilates to the developing ovules and seeds, such as the vasculature and seed coat (at protein level) (PubMed:17283014).
messages: Allosterically activated by calcium. It may represent the only case of a monomeric, allosteric enzyme.
messages: Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Cytoplasm
messages: Expressed in flowers, siliques, seeds, stems and roots.
messages: Involved in the gluconeogenesis (By similarity). Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (By similarity).
messages: Monomer.

3702:AT2G44880
gene id: 3702:AT2G44880
uniprot id: Q1PEU4
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT5G40810
gene id: 3702:AT5G40810
uniprot id: A0A178UU90
uniprot id: Q9FKS5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c family.
messages: Binds 1 heme c group covalently per subunit.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341, PubMed:18305213). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c. Cytochrome c1 is a catalytic core subunit containing a c-type heme. It transfers electrons from the [2Fe-2S] iron-sulfur cluster of the Rieske protein to cytochrome c.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT5G17330
gene id: 3702:AT5G17330
uniprot id: A0A5S9Y4Y1
uniprot id: Q42521
names: Activity Regulation
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the group II decarboxylase family.
messages: Catalyzes the conversion of glutamate to 4-aminobutanoate (GABA). The calmodulin-binding is calcium-dependent and it is proposed to directly or indirectly form a calcium regulated control of GABA biosynthesis.
messages: Down-regulated by salt treatment. Not induced by hypoxia.
messages: Expressed in roots. Detected at low levels in shoots of young seedlings. Not detected in the root tips or in the central vascular bundle in the elongating region of mature roots.
messages: Homohexamer. Interacts with calmodulin with a 1:3 stoichiometry.
messages: No visible phenotype, but increased glutamate levels and decreased GABA levels in the roots, and loss of GABA accumulation upon heat stress.
messages: The N-terminus (1-57) is involved in the formation of the multimer. The C-terminus (471-502) binds calmodulin in a calcium-dependent fashion and contains probably an autoinhibitory domain.
messages: Up-regulated by calmodulin binding at physiological pH.

3702:AT3G17590
gene id: 3702:AT3G17590
uniprot id: A0A1I9LPZ2
uniprot id: A0A5S9XD22
uniprot id: F4J581
uniprot id: P93045
uniprot id: Q2HIG1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SNF5 family.
messages: Component of a multiprotein complex equivalent of the yeast SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors.
messages: Expressed in roots, stems, leaves, flowers and siliques.
messages: Interacts with SWI3A and SWI3B, but not with BRM.
messages: Nucleus
messages: Was named BUSHY by PubMed:10325430 because antisense transgenic plants have a 'bushy' phenotype.

3702:AT3G59770
gene id: 3702:AT3G59770
uniprot id: Q7XZU0
names: Disruption Phenotype
names: Domain
names: Function
names: Tissue Specificity
messages: Characteristics of a constitutive stress response, including dwarfism, closed stomata, and accumulation of anthocyanin and reactive-oxygen species. Accumulates elevated levels of PtdIns(4,5)P(2) and Ins(1,4,5)P(3) in roots. Hypersensitivity to salt stress. Late flowering, shorter roots with less lateral branching and low fertility. Abnormalities of cell wall and membrane structures in primary root cells.
messages: Probable phosphoinositide phosphatase that could be involved in stress signaling.
messages: The phosphatase catalytic core motif (or RXNCXDCLDRTN motif) from the SAC domain is found in metal-independent protein phosphatases and inositol polyphosphate phosphatases.
messages: Ubiquitous. Most abundant in the roots with lower expression levels throughout the leaves and shoot.

3702:AT5G04970
gene id: 3702:AT5G04970
uniprot id: Q9FF77
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT2G15790
gene id: 3702:AT2G15790
uniprot id: Q9C566
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cyclophilin-type PPIase family.
messages: Binds cyclosporin A (CsA). CsA mediates some of its effects via an inhibitory action on PPIase (By similarity).
messages: Cytoplasm
messages: Expressed at low levels in seedlings, roots, shoots, leaves, stems, inflorescences, flowers and siliques, with highest levels dividing tissues.
messages: PPIases accelerate the folding of proteins (PubMed:11264535). It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (PubMed:11264535). Involved in promoting the expression of the juvenile phase of vegetative development, and, to a lower extent, in regulating the positioning of floral buds, floral morphogenesis and the expression of HSPs (PubMed:11264535). Collaboratively with RBL and ULT1, influences floral meristem (FM) determinacy in an AGAMOUS and SUPERMAN-dependent manner, thus contributing to the floral developmental homeostasis (PubMed:18441215).
messages: Plants lacking both CRC and CYP40/SQN exhibit strong floral meristem (FM) indeterminacy with reiterations of extra floral whorls in the center of the flower associated with reduced AGAMOUS and SUPERMAN levels.

3702:AT5G64530
gene id: 3702:AT5G64530
uniprot id: Q8GWK6
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in root xylem vessels (PubMed:15923329). Expressed in stems, vascular tissue of cauline leaves and tracheary elements of sepals (PubMed:18069942).
messages: Nucleus
messages: Plants over-expressing NAC104 show severe dwarfism and suppression of tracheary element differentiation.
messages: Probable transcription factor that influences tracheary elements and xylem development by negatively regulating secondary cell wall fiber synthesis and programmed cell death.
messages: Reduced plant height and length of tracheary elements in the stem.
messages: The NAC domain includes a DNA binding domain and a dimerization domain.

3702:AT2G45750
gene id: 3702:AT2G45750
uniprot id: A0A178VQA6
uniprot id: O80844
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT2G01320
gene id: 3702:AT2G01320
uniprot id: A0A178VRW2
uniprot id: A0A178VSW5
uniprot id: A0A178VTF8
uniprot id: A0A1P8B1W8
uniprot id: A0A1P8B1X3
uniprot id: A0NAA8
uniprot id: Q9ZU35
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G42210
gene id: 3702:AT5G42210
uniprot id: A0A1P8BEX6
uniprot id: A0A654G872
uniprot id: F4K1G9
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G54070
gene id: 3702:AT1G54070
uniprot id: A0A178WQQ4
uniprot id: F4HV65
names: Similarity
messages: Belongs to the DRM1/ARP family.

3702:AT4G23950
gene id: 3702:AT4G23950
uniprot id: F4JPE9
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Encodes a member of the mid-SUN subfamily of SUN-domain proteins. It is involved in early seed development and nuclear morphology. [TAIR].
messages: Forms homomers. Interacts with SUN3 and TIK.
messages: Membrane
messages: No visible phenotype. Embryo lethal when associated with disruption mutants SUN3 and SUN4.

3702:AT5G38050
gene id: 3702:AT5G38050
uniprot id: Q9LS15
names: Similarity
messages: Belongs to the EAF family.

3702:AT5G62050
gene id: 3702:AT5G62050
uniprot id: A0A178UA29
uniprot id: Q42191
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the OXA1/ALB3/YidC (TC 2.A.9.2) family.
messages: Belongs to the OXA1/ALB3/YidC family.
messages: Expressed in stem, leaf and flower.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Required for the insertion of integral membrane proteins into the mitochondrial inner membrane. Essential for activity and assembly of cytochrome c oxidase.

3702:AT3G09920
gene id: 3702:AT3G09920
uniprot id: Q8L850
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Interacts with CINV1.
messages: Membrane
messages: Nucleus
messages: Plays a role in sugar-mediated root development. Interaction with CINV1 induces repression of CINV1 activity and negative regulation of sugar-mediated root cell elongation.
messages: The gain-of-function mutant pip5k9-d (T-DNA insertion line) has reduced primary root length.
messages: Transiently down-regulated by cold.
messages: Widely expressed.

3702:AT3G14290
gene id: 3702:AT3G14290
uniprot id: A0A178VCX2
uniprot id: Q42134
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.

3702:AT3G16360
gene id: 3702:AT3G16360
uniprot id: A0A384KT90
uniprot id: F4J1I8
uniprot id: Q9LU15
names: Caution
names: Domain
names: Function
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay.
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.
messages: Histidine-containing phosphotransfer domain (HPt) contains an active histidine that mediates the phosphotransfer.
messages: Interacts with the B-type response regulators ARR1 and ARR2.
messages: Nucleus
messages: Predominantly expressed in aerial parts of the plant.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Two-component system major event consists of a His-to-Asp phosphorelay between a sensor histidine kinase (HK) and a response regulator (RR). In plants, the His-to-Asp phosphorelay involves an additional intermediate named Histidine-containing phosphotransfer protein (HPt). This multistep phosphorelay consists of a His-Asp-His-Asp sequential transfer of a phosphate group between first an His and an Asp of the HK protein, followed by the transfer to a conserved His of the HPt protein and finally the transfer to an Asp in the receiver domain of the RR protein.
messages: cytosol

3702:AT1G71120
gene id: 3702:AT1G71120
uniprot id: A0A178WCW6
uniprot id: Q9C996
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G50870
gene id: 3702:AT3G50870
uniprot id: Q8LC79
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Hanaba taranu' means 'fewer floral leaves' in Japanese.
messages: Abnormal flower and shoot apical meristem (SAM) development with fused sepals and reduced organ numbers in all four whorls as well as flatter and smaller meristems (PubMed:15367721, PubMed:23335616). Reduced levels of gibberellins (GA) but increased content of trans-zeatin riboside (ZR) and auxin (IAA) (PubMed:26390296). Coordinated apical shift of gene expression patterns in the basal proembryo, including auxin transporter genes and resulting in apical redistribution of auxin (PubMed:20643354). Altered WUS expression from early embryogenesis (e.g. globular stage) (PubMed:15367721). The double mutant an3 han-30 exhibits severe defects in cotyledon development such as ectopic roots formation at the apical region of the embryo and associated with an abnormal expansion of PLT1 expression from the basal embryonic region to the apical region (PubMed:22669825). The double mutant pnh-2 han-2 has smaller inflorescence meristems (IM) and taller floral meristems (FM) leading to fewer petals. The double mutant han-2 jag-3 exhibits reduced petal numbers, more serrated sepals and narrower petals (PubMed:26390296).
messages: Belongs to the type IV zinc-finger family. Class B subfamily.
messages: Expressed in vegetative and inflorescence shoot apical meristems (SAMs), axillary (SAMs), floral meristems, developing ovules and stamens, vascular tissues, and in the embryo.
messages: Homodimer (PubMed:23335616, PubMed:26390296). Forms heterodimers with GATA19, GATA22 and GATA21 (PubMed:23335616). Interacts with JAG. Binds to AGO10/PNH (PubMed:26390296).
messages: In the developing axillary shoot apical meristem (SAM), expressed at the boundary between nascent axillary meristems and the adaxial side of leaves. In all mature SAMs, located at the boundaries between the central SAM and the initiating organ primordia, as well as between the neighboring initiating organ primordia. In the floral meristem, strongly expressed at the boundaries between the meristematic dome and the initiating floral organ primordia, and also at the boundaries between the primordia of different whorls. Expression at the boundaries attenuates as the organ primordia grow apart. In flowers, localized at the boundary between the central meristematic cells and differentiating stamen primordia to later accumulates at the medial ridge region of the carpel. Highly expressed in the developing anthers, in both the tapetum cell layer and microsporocytes. In developing ovules, confined to inner and outer integuments. In aerial tissues, strongly present in phloem tissues (PubMed:15367721). First observed in the whole embryo, but later confined to the center cells of the embryo and provascular tissues (PubMed:15367721, PubMed:20643354).
messages: Nucleus
messages: Repressed via a negative regulatory feedback loop.
messages: Transcriptional factor that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (including its own promoter and GATA21 promoter), thus regulating the expression of genes mostly involved in hormone responses and floral organ specification (including genes regulating hormones responses) (PubMed:23335616, PubMed:26390296). Regulates both flower and shoot apical meristem (SAM) development, especially for establishing organ boundaries in shoots and flowers, probably by controlling the number and position of WUS-expressing cells (PubMed:15367721, PubMed:23335616). Coregulates, with AGO10/PNH, the shoot apical meristem (SAM) organization. Regulates floral organ development via the promotion of JAG and NPR5/BOP2 expression. Modulates cytokinin homeostasis in organ boundaries by regulating CKX3 expression (PubMed:26390296). Involved in cell proliferation and differentiation (PubMed:15367721). Required to position the inductive proembryo boundary via the regulation of gene expression and for early embryonic development (PubMed:20643354). Together with GIF1/AN3, mediates cotyledon identity by preventing ectopic root formation through the repression of PLT1 expression (PubMed:22669825).

3702:AT1G62710
gene id: 3702:AT1G62710
uniprot id: A0A178W0Z7
uniprot id: Q39044
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms (By similarity). Probably involved in post-translational proteolysis of seed storage proteins in the protein storage vacuole of developing seeds (PubMed:12417707, PubMed:14688293).
messages: Auto-catalytic activation.
messages: Belongs to the peptidase C13 family.
messages: No macroscopic phenotype, probably due to functional redundancy (PubMed:12417707, PubMed:14688293). Slight differences in polypeptide accumulation in seeds with an increased amount of propolypeptide forms of legumin-type globulins (PubMed:12417707). In plants lacking all vacuolar-processing enzyme isozymes (e.g. alpha, beta, gamma and delta) shift of storage protein accumulation from normally processed polypeptides to a finite number of prominent alternatively processed polypeptides cleaved at sites other than the conserved Asn residues targeted by VPE (PubMed:14688293).
messages: Protein storage vacuole
messages: Seed specific. Also expressed in the flowers and buds.
messages: Vacuole

3702:AT3G02470
gene id: 3702:AT3G02470
uniprot id: A0A178VEW3
uniprot id: Q96286
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
messages: Belongs to the eukaryotic AdoMetDC family.
messages: Binds 1 pyruvoyl group covalently per subunit.
messages: Down-regulated by auxin.
messages: Essential for biosynthesis of the polyamines spermidine and spermine. Essential for polyamine homeostasis, and normal plant embryogenesis, growth and development.
messages: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The post-translation cleavage follows an unusual pathway, termed non-hydrolytic serinolysis, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl group blocking the N-terminus of the alpha chain.
messages: Reduction in the length of stem internodes. Increased thickness of veins in leaves and inflorescence stems. Altered morphology of xylem vessel elements. The double mutants of bud2-1 and samdc1-1 are embryonic lethal.

3702:AT3G57700
gene id: 3702:AT3G57700
uniprot id: A0A384KKU0
uniprot id: Q9SVY4
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane
messages: Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
messages: The EGF-like region is specific to this family of proteins and seems to consist of the C-terminal of an EGF-like domain fused to the N-terminal of another one.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G14530
gene id: 3702:AT3G14530
uniprot id: Q9LUE1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FPP/GGPP synthase family.
messages: Binds 2 Mg(2+) ions per subunit.
messages: Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.
messages: Monomer (By similarity). No interactions with GGR.
messages: chloroplast

3702:AT4G37860
gene id: 3702:AT4G37860
uniprot id: A0A1P8B588
uniprot id: A0A654FWZ0
uniprot id: Q9T073
names: Similarity
messages: Belongs to the SPT2 family.

3702:AT5G47670
gene id: 3702:AT5G47670
uniprot id: A0A178UB79
uniprot id: Q84W66
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Altered response to abscisic acid (ABA).
messages: Belongs to the NFYB/HAP3 subunit family.
messages: Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. Plays a role in the regulation of the embryogenesis. Involved in the abscisic acid (ABA) signaling pathway.
messages: Enhanced by dehydration stress.
messages: Expressed in roots, flowers and developing siliques. Present in etiolated seedlings.
messages: Expressed primarily during seed development.
messages: Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC (PubMed:27871811). NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (PubMed:27871811). Interacts with PRN1 (PubMed:17322342). Binds directly with DPB3-1 (PubMed:25490919).
messages: Nucleus

3702:AT1G80000
gene id: 3702:AT1G80000
uniprot id: A0A178WMN8
uniprot id: A0A1P8AV18
uniprot id: Q93ZJ9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CASC3 family.
messages: Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Stimulates the ATPase and RNA-helicase activities of EIF4A3.
messages: Cytoplasm
messages: Nucleus
messages: Weekly interacts with EIF4A3.

3702:AT3G13720
gene id: 3702:AT3G13720
uniprot id: A0A654F8J6
uniprot id: Q9LIC6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PRA1 family.
messages: Cytoplasm
messages: Endoplasmic reticulum membrane
messages: Expressed in lateral roots, lateral root caps and columella cells.
messages: Interacts with PRA1F2 and PRA1D (PubMed:18583532). Interacts with ACD11 and BPA1 (PubMed:18845362).
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane
messages: No visible phenotype.

3702:AT5G14620
gene id: 3702:AT5G14620
uniprot id: Q9M548
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. DRM-methyltransferase family.
messages: DRM2 is expressed at much higher levels than DRM1, which is scarcely detected, suggesting that DRM2 is the predominant de novo methylase.
messages: Expressed in roots, inflorescences and at lower levels in leaves.
messages: Interacts with RDM1.
messages: Involved in de novo DNA methylation. Controls asymmetric and CpNpG methylation. Required for FWA gene silencing but not for the maintenance of SUP gene silencing. Functionally redundant to CMT3 to maintain non-CpG methylation. Involved in RNA-directed DNA methylation (RdDM) (PubMed:12121623, PubMed:12151602, PubMed:14680640). Acts as major DNA methyltransferase in the RdDM pathway, and is essential for RNA-directed de novo DNA methylation of cytosines in all sequence contexts (PubMed:21060858, PubMed:21212233). Associates with long non-coding RNA (lncRNA) produced by RNA polymerase V (Pol V). This association is dependent on AGO4 and IDN2, and results in DNA methylation of RdDM target loci (PubMed:24862207).
messages: nucleoplasm

3702:AT2G17370
gene id: 3702:AT2G17370
uniprot id: A0A178VRN5
uniprot id: P43256
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HMG-CoA reductase family.
messages: Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: No visible phenotype under normal growth conditions, but 25% lower levels in triterpenoids content and 15% lower levels in sterol content. Hmg1 and hmg2 double mutants are lethal during male gametophyte development.
messages: Not regulated by myriocin, squalestatin or terbinafine.
messages: Regulated at the post-translational level in response to alterations of the sphingolipid and the sterol biosynthetic pathways.
messages: Restricted to young seedlings, roots, and inflorescences. Expressed in root tips, shoot apex, secretory zone of the stigma, microspores, mature pollen grains, gynoecium vascular tissue and fertilized ovules.

3702:AT4G16260
gene id: 3702:AT4G16260
uniprot id: A0A1P8B3U2
uniprot id: Q8VZJ2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: (Microbial infection) Interacts with the 30C02 effector protein (AC G3GD54) of the beet cyst nematode Heterodera schachtii. Interaction with the 30C02 effector protein may potentially suppress beta-1,3-glucanase activity and plant defense.
messages: (Microbial infection) Specifically down-regulated by Heterodera schachtii (cyst nematodes) in nematode-induced syncytia.
messages: Belongs to the glycosyl hydrolase 17 family.
messages: Induced by infection with the Cucumber mosaic virus (CMV).
messages: May be involved in plant defense against cyst nematode pathogens.
messages: Secreted

3702:AT3G09630
gene id: 3702:AT3G09630
uniprot id: A0A178VDX8
uniprot id: Q2V3X4
uniprot id: Q9SF40
names: Similarity
messages: Belongs to the universal ribosomal protein uL4 family.

3702:AT2G21560
gene id: 3702:AT2G21560
uniprot id: A0A178VN85
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G58280
gene id: 3702:AT1G58280
uniprot id: F4IBB2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphoglycerate mutase family.
messages: May play a role in carbohydrates metabolism.
messages: chloroplast

3702:AT3G13180
gene id: 3702:AT3G13180
uniprot id: Q8VYC4
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.

3702:AT1G17070
gene id: 3702:AT1G17070
uniprot id: Q9SHG6
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TFP11/STIP family.
messages: Identified in the spliceosome C complex (By similarity). Interacts with ILP1 (PubMed:25568310).
messages: Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events (By similarity). Involved in snRNPs recycling (PubMed:25568310). Required for efficient splicing of genes that act within the plant circadian clock (PubMed:23110899). Part of a transcription elongation checkpoint at alternative exons (PubMed:25568310). Required for correct expression and splicing of DOG1, a regulator of seed dormancy (PubMed:25568310). May induce transient transcriptional pausing of polymerase II at slices sites (PubMed:25568310).
messages: Long circadian-period phenotype under free-running conditions.
messages: Nucleus
messages: Physically located at the target splice sites.

3702:AT1G78380
gene id: 3702:AT1G78380
uniprot id: A0A178W4K6
uniprot id: Q9ZRW8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: By dehydration stress, salicylic acid, ethylene, methyl jasmonate, auxin, H(2)O(2), copper, benoxacor, isothiocyanates and the pathogen Hyaloperonospora parasitica.
messages: Catalyzes the glutathionylation of 12-oxophytodienoate (OPDA). In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB) and benzyl isothiocyanate (BITC), and glutathione peroxidase activity toward cumene hydroperoxide.
messages: cytosol

3702:AT4G28780
gene id: 3702:AT4G28780
uniprot id: A0A178UXD1
uniprot id: Q9SVU5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G29360
gene id: 3702:AT3G29360
uniprot id: Q9LIA8
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
messages: Inhibited by UDP-xylose.
messages: Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. Required for the formation of cell wall ingrowths on the outer cell walls of nematode-induced syncytia.
messages: No visible phenotype. Displays smaller nematode-induced syncytia. The UGD2 UGD3 double mutant displays a strong dwarf phenotype and often develops seedlings with severe root defects; cell walls have an altered sugar composition (PubMed:21949134). Ugd2 and ugd3 double mutants display abnormal nematode-induced syncytia (PubMed:22848518).
messages: Preferentially expressed in roots.
messages: Restricted expression to the primary root in young seedlings. Later detected in hypocotyl, leaves but with the strongest expression in the root system.

3702:AT4G39630
gene id: 3702:AT4G39630
uniprot id: A0A1P8B374
uniprot id: F4JW44
names: Subcellular Location Annotation
messages: centromere

3702:AT1G03020
gene id: 3702:AT1G03020
uniprot id: A0A178WAC0
uniprot id: Q9SA68
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutaredoxin family. CC-type subfamily.
messages: Cytoplasm
messages: May only reduce GSH-thiol disulfides, but not protein disulfides.

3702:AT2G21220
gene id: 3702:AT2G21220
uniprot id: A0A178VNV7
uniprot id: Q9SIG9
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ARG7 family.
messages: Cell membrane
messages: Confined to styles of stage 13-16 flowers.
messages: Expressed in flowers and etiolated hypocotyls.
messages: Induced by auxin (PubMed:29258424). Triggered by brassinosteroids (PubMed:29258424).
messages: Provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), and triggers PM H(+)-ATPases activity by promoting phosphorylation of their C-terminal autoinhibitory domain as a result of PP2C-D subfamily of type 2C phosphatases inhibition, thus leading to the acidification of the apoplast and the facilitation of solutes and water uptake to drive cell expansion (By similarity). Triggers plant growth probably by promoting cell elongation (By similarity). Regulates branch angles and bending (By similarity).

3702:AT5G52570
gene id: 3702:AT5G52570
uniprot id: Q9LTG0
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the sterol desaturase family.
messages: Expressed in leaves, flowers, stems, roots and siliques.
messages: Homodimer.
messages: No visible phenotype when grown under normal light conditions; due to the redundancy with BCH1. Bch1 and bch2 double mutant has no visible phenotype, but lower levels of beta, beta-xanthophylls and increased beta-carotene and lutein. Cyp97c1, bch1 and bch2 triple mutant is paler and smaller than wild-type.
messages: Nonheme diiron monooxygenase involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylations of beta-carotene. Has also a low activity toward the beta- and epsilon-rings of alpha-carotene. No activity with acyclic carotenoids such as lycopene and neurosporene. Uses ferredoxin as an electron donor.
messages: The histidine box domains may contain the active site and/or be involved in iron binding.
messages: chloroplast membrane

3702:AT3G48820
gene id: 3702:AT3G48820
uniprot id: A0A654FE41
uniprot id: A0A7G2ESD4
uniprot id: F4JF56
uniprot id: Q8RY00
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 29 family.
messages: Golgi apparatus membrane
messages: Male gametophytic lethality when homozygous. May be due to defect in pollen grain germination and pollen tube growth.
messages: May be involved in the transfer of 2-keto-3-deoxy-D-lyxo-heptulosaric acid (Dha) and/or 2-keto-3-deoxy-D-manno-octulosonic acid (Kdo) on the homogalacturonan backbone of rhamnogalacturonan-II. Required for efficient pollen grain germination and pollen tube elongation (PubMed:24825296). Does not possess sialyltransferase activity in vitro (PubMed:19470101).
messages: Membrane

3702:AT5G53980
gene id: 3702:AT5G53980
uniprot id: A0A5S9YDU2
uniprot id: Q9FN29
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class I subfamily.
messages: Expressed in roots and flowers.
messages: Nucleus
messages: Probable transcription factor.
messages: Transcription factor.

3702:AT3G06580
gene id: 3702:AT3G06580
uniprot id: A0A178VJ04
uniprot id: Q9SEE5
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the GHMP kinase family. GalK subfamily.
messages: Expressed in roots, stems, leaves, flowers and young siliques. Higher expression in the elongating middle stem region than in the lower or upper stem region.
messages: Magnesium. Can also use other divalent cations like manganese or calcium.
messages: Sugar-1-kinase with a very high substrate specificity for the alpha-anomeric configuration of D-galacose (D-Gal). Converts also efficiently 2-deoxy-D-Gal to 2-deoxy-D-al-1-phosphate.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G15440
gene id: 3702:AT2G15440
uniprot id: A0A178VWF3
uniprot id: Q9SJN8
names: Subcellular Location Annotation
messages: Golgi apparatus membrane
messages: Membrane

3702:AT5G65430
gene id: 3702:AT5G65430
uniprot id: A0A178UEJ8
uniprot id: F4KHY7
uniprot id: P48348
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 14-3-3 family.
messages: Cytoplasm
messages: Disturbed levels of several metabolites (e.g. beta-alanine, ribose, aspartate, pyroglutamate, glutamate, asparagine, fructose-6-phosphate, myo-inositol, 1,4-diaminobutane, palmitate and shikimate). Enhanced freezing tolerance associated with enhanced cold induction of cold-responsive C-repeat-binding factor (CBF) target genes in the double mutant lacking both GRF6 and GRF8, probably due to the suppression of ubiquitin-mediated degradation DREB1A and DREB1B degradation by the 26S proteasome pathway (PubMed:28344081).
messages: Interacts with the isocitrate dehydrogenase IDH3, and malate dehydrogenases MDH1 and MDH2 (PubMed:22104211). Interacts with CINV1 (PubMed:25256212).
messages: Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes. Involved in the regulation of nutrient metabolism (PubMed:22104211). Negative regulator of freezing tolerance that modulates cold-responsive C-repeat-binding factors (CBF) DREB1A AND DREB1B proteins stability by facilitating their ubiquitin-mediated degradation (PubMed:28344081).
messages: Nucleus

3702:AT1G61440
gene id: 3702:AT1G61440
uniprot id: A0A1P8ASG9
uniprot id: A0A1P8ASM5
uniprot id: A0A654EK20
uniprot id: O64776
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Membrane

3702:AT5G35590
gene id: 3702:AT5G35590
uniprot id: A0A178U8E1
uniprot id: O81146
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase T1A family.
messages: Component of the 20S core complex of the 26S proteasome. The 26S proteasome is composed of a core protease (CP), known as the 20S proteasome, capped at one or both ends by the 19S regulatory particle (RP/PA700). The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.
messages: Cytoplasm
messages: Nucleus
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Ubiquitous low levels, higher expression in siliques and flowers.

3702:AT1G53770
gene id: 3702:AT1G53770
uniprot id: F4HTC2
uniprot id: Q501D6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT1G03080
gene id: 3702:AT1G03080
uniprot id: F4HZB5
names: Function
names: Similarity
messages: Belongs to the NET family.
messages: Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex.

3702:AT2G17360
gene id: 3702:AT2G17360
uniprot id: A0A5S9WYP6
uniprot id: Q93VH9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic ribosomal protein eS4 family.
messages: Cytoplasm

3702:AT5G16540
gene id: 3702:AT5G16540
uniprot id: Q8L7N8
names: Miscellaneous
names: Subcellular Location Annotation
messages: May be due to a competing donor splice site.
messages: May be due to intron retention.
messages: Nucleus

3702:AT5G54770
gene id: 3702:AT5G54770
uniprot id: A0A178UNL2
uniprot id: Q38814
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the THI4 family.
messages: Binds 1 Fe cation per subunit.
messages: Cell membrane
messages: During the catalytic reaction, a sulfide is transferred from Cys-216 to a reaction intermediate, generating a dehydroalanine residue (PubMed:22031445, PubMed:24637331). Not phosphorylated in vitro by CPK33 (PubMed:26662273).
messages: During the catalytic reaction, a sulfide is transferred from Cys-216 to a reaction intermediate, generating a dehydroalanine residue.
messages: Expressed at high levels in chloroplast-containing parenchymatic cells of leaves, inflorescence shoots and flowers, and at lower levels in the vascular system (PubMed:8771789). In young plants, detected in roots and shoots including cotyledons, leaves and hypocotyls (PubMed:12941878). Also observed in apical meristematic regions, siliques and embryos (PubMed:15897230). Low expression in roots, limited to the vascular tissue (PubMed:15897230). Broadly expressed in roots, cotyledons, leaves, hypocotyls, inflorescences, siliques, and strongly in guard cells (PubMed:26662273).
messages: Expressed throughout develpoment.
messages: Homooctamer.
messages: Homooctomer (PubMed:16912043, PubMed:24637331). Interacts with RBCX1 and RBCX1 (PubMed:21922322). Interacts with CPK33 (PubMed:26662273).
messages: Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron-dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance.
messages: Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron-dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance. Acts as a positive regulator for the abscisic acid-induced activation of slow type anion channels during stomatal closure by repressing CPK33 kinase activity.
messages: Mitochondrial precursor. Contains a mitochondrial presequence-like structure at its N-terminus.
messages: Mitochondrion
messages: Up-regulated by osmotic stress, sugar deprivation, high salinity, and hypoxia (PubMed:15897230, PubMed:22214485). Up-regulated by abscisic acid treatment and drought stress (PubMed:22214485, PubMed:26662273). No effect of thiamine, salicylic acid or paraquat treatments (PubMed:12941878, PubMed:22214485). Down-regulated by dark incubation (PubMed:12941878).
messages: chloroplast

3702:AT4G35670
gene id: 3702:AT4G35670
uniprot id: A0A178UV87
uniprot id: A0A1P8B557
uniprot id: F4JN47
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G42650
gene id: 3702:AT5G42650
uniprot id: Q96242
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome P450 family.
messages: By wounding.
messages: plastoglobule

3702:AT5G14790
gene id: 3702:AT5G14790
uniprot id: A0A178UAC1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G69200
gene id: 3702:AT1G69200
uniprot id: F4I0K2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the carbohydrate kinase PfkB family.
messages: Interacts with CITRX/TRXz (PubMed:20511297). Binds to FLN1 and PTAC5. Associates with the plastid-encoded RNA polymerase (PEP) complex (PubMed:24019900).
messages: Plants display chlorosis prior to leaf expansion, but exhibit slow greening, remain autotrophic, can grow to maturity, and set viable seed (PubMed:22770232). Albino phenotype of seedlings grown on sucrose-free medium associated with reduced plastid-encoded RNA polymerase (PEP)-dependent gene expression and altered chloroplast development. Delayed greening of seedlings grown on sucrose-containing medium (PubMed:24019900).
messages: RNAi plants display abnormal plastids lacking internal membrane structures.
messages: Required for proper chloroplast development, most likely through regulating plastid-encoded polymerase (PEP) dependent chloroplast transcription. Acts as a component of the transcriptionally active plastid chromosome that is required for plastid gene expression.
messages: chloroplast

3702:AT3G01390
gene id: 3702:AT3G01390
uniprot id: A0A178VL96
uniprot id: O82628
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase G subunit family.
messages: Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: Cell membrane
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.
messages: Vacuole membrane

3702:AT4G04340
gene id: 3702:AT4G04340
uniprot id: Q9XEA1
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by mechanical pressure.
messages: Acts as a hyperosmolarity-gated non-selective cation channel that permeates Ca(2+) ions (PubMed:25162526, PubMed:30190597). Shows the following permeability sequence: K(+) > Ba(2+) = Ca(2+) > Na(+) = Mg(2+) = Cs(+) (PubMed:25162526). Mechanosensitive ion channel that converts mechanical stimuli into a flow of ions (PubMed:30190597).
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Cell membrane
messages: Expressed in leaves, flowers, roots and guard cells.
messages: Homodimer.
messages: Impaired osmotic Ca(2+) signaling in guard cells and root cells, and attenuated water transpiration regulation and root growth in response to osmotic stress.

3702:AT4G04890
gene id: 3702:AT4G04890
uniprot id: Q93V99
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
messages: Interacts with GAI/RGA2, RGA/RGA1/GRS, RGL2/SCL19 and ATML1 (PubMed:24989044). Binds to AIL7/PLT7, ANT, BBM and AIL1 (PubMed:25564655).
messages: Nucleus
messages: Plants missing both PDF2 and ATML1 have reduced levels of L1 box/ gibberellic acid (GA)-regulated putative targets, including LIP1, LIP2, LTP1, FDH and PDF1, in the presence of GA and during seed germination, thus leading to a delayed germination upon imbibition (PubMed:24989044). Double mutants pdf2-1 hdg1-1, pdf2-1 hdg2-3, pdf2-1 hdg5-1 and pdf2-1 hdg12-2 exhibit abnormal flowers with sepaloid petals and carpelloid stamens in association with a reduced expression of APETALA 3 (AP3) (PubMed:23590515). In plants missing HDG3, HDG7, HDG11, PDF2 and ATML1, increased cell division leading to cell overproliferation (PubMed:25564655).
messages: Probable transcription factor that binds to the L1 box DNA sequence 5'-TAAATG[CT]A-3'. Plays a role in maintaining the identity of L1 cells, possibly by interacting with their L1 box or other target-gene promoters; binds to the LIP1 gene promoter and stimulates its expression upon imbibition (PubMed:24989044). Acts as a positive regulator of gibberellins (GAs)-regulated epidermal gene expression (e.g. LIP1, LIP2, LTP1, FDH and PDF1) (PubMed:24989044). Functionally redundant to ATML1 (PubMed:24989044). Involved, together with HDG proteins (e.g. HDG1, HDG2, HDG5 and HDG12), in the regulation of flower organs development by promoting the expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers (PubMed:23590515). Seems to promote cell differentiation (PubMed:25564655).
messages: Specifically expressed in the layer 1 (L1) of shoot meristems.
messages: Stimulated during seed imbibition (PubMed:24989044). Induced by gibberellins (GAs) and repressed by DELLA proteins in an ATML1- and PDF2-dependent manner (PubMed:24989044). Upon seed imbibition, increased GA levels in the epidermis reduce DELLA proteins (e.g. GAI/RGA2, RGA/RGA1/GRS and RGL2/SCL19) abundance and release, in turn, ATML1 and PDF2 which activate LIP1 expression, thus enhancing germination potential (PubMed:24989044).

3702:AT2G44065
gene id: 3702:AT2G44065
uniprot id: A0A384KKH3
uniprot id: Q8VZU4
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

3702:AT2G46200
gene id: 3702:AT2G46200
uniprot id: Q8VYD3
names: Subcellular Location Annotation
names: Subunit
messages: Component of the U11/U12 snRNPs that are part of the U12-type spliceosome.
messages: Nucleus

3702:AT3G22360
gene id: 3702:AT3G22360
uniprot id: O23913
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the alternative oxidase family.
messages: Binds 2 iron ions per subunit.
messages: Catalyzes the cyanide-resistant oxidation of ubiquinol and the reduction of molecular oxygen to water, but does not translocate protons and consequently is not linked to oxidative phosphorylation. May increase respiration when the cytochrome respiratory pathway is restricted, or in response to low temperatures (By similarity).
messages: Expressed during early flower development. Not detected during germination.
messages: Expressed in flowers. Detected only in stamen.
messages: Homodimer; disulfide-linked.
messages: Mitochondrion inner membrane
messages: No effect of antimycin A, ethylene or cold treatments.

3702:AT5G52910
gene id: 3702:AT5G52910
uniprot id: A0A1P8B9S9
uniprot id: Q9FLX0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G28310
gene id: 3702:AT1G28310
uniprot id: A0A178W100
uniprot id: A0A384K8E7
uniprot id: C0SUX9
uniprot id: Q2V4K7
uniprot id: Q9FZA4
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

3702:AT3G62020
gene id: 3702:AT3G62020
uniprot id: A0A384LFT5
uniprot id: A0JQ09
uniprot id: Q3EAG0
uniprot id: Q9M263
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the germin family.
messages: May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
messages: Oligomer (believed to be a pentamer but probably hexamer).
messages: apoplast

3702:AT2G01640
gene id: 3702:AT2G01640
uniprot id: A0A178VZL7
uniprot id: Q9ZU92
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLX9 family.
messages: nucleolus

3702:AT2G03410
gene id: 3702:AT2G03410
uniprot id: Q9ZQ77
names: Similarity
messages: Belongs to the Mo25 family.

3702:AT1G07640
gene id: 3702:AT1G07640
uniprot id: Q2V4Q1
uniprot id: Q8L9V6
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By auxin and salicylic acid (SA) (PubMed:10758484). Induced transiently in response to the generalist herbivore S.littoralis. Triggered by methyl jasmonate (MeJA) and wounding (PubMed:16740150).
messages: Expressed in the vasculature (mainly in the phloem and associated cell files) of cotyledons, leaves, roots, flower stalks and petals (PubMed:10758484, PubMed:16740150, PubMed:23057675). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) form a short-range concentration gradient that peaks at protophloem sieve elements (PSE) (PubMed:30626969).
messages: In roots, confined to the central cylinder (vascular tissue and pericycle) of both main and lateral roots. In leaves, expressed in the vasculature, mostly in phloem cells. Also present in the vasculature of stems and in stamen filaments of flowers. Detected at low levels in the vasculature of petals and carpels.
messages: Interacts with OBF4.
messages: Nucleus
messages: Reduced expression of CYP83B1. Longer hypocotyls and increased lateral root formation.
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements (By similarity). Involved in the regulation of root development (PubMed:23057675). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Element of a regulatory network controlling indole glucosinolates (IGS) biosynthesis, probably by inducing the expression of accurate genes (e.g. CYP83B1). Promotes apical dominance (PubMed:16740150).

3702:AT5G41790
gene id: 3702:AT5G41790
uniprot id: F4JZY1
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: In seedlings, accumulates in cotyledons and the hypocotyl, especially in the vein. In adult plants, mainly detected in mature leaves, particularly in vascular tissues. Also present in the vein of sepals and petals of flowers.
messages: Induced by osmotic stress (e.g. mannitol) and abscisic acid (ABA).
messages: Interacts with COP1 coiled-coil region.
messages: Mainly expressed in photosynthetic and vascular tissues. Accumulates in both dark-grown and light-grown seedlings roots and shoots, leaves and flowers (at protein level).
messages: Positive regulator of abscisic acid (ABA)-mediated signaling pathways involved in abiotic stress responses (e.g. osmotic stress) and leading to various plant adaptation (e.g. stomata closure).
messages: Short hypocotyls. Increased sensitivity to osmotic stress (e.g. mannitol), but reduced sensitivity to abscisic acid (ABA) associated with lower levels of abiotic stress-related gene expression but higher ABA biosynthesis genes levels.
messages: cytoskeleton

3702:AT4G18350
gene id: 3702:AT4G18350
uniprot id: O49505
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the carotenoid oxygenase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.
messages: Low induction by drought stress.
messages: Very low in all tissues. Expressed at the point of organ attachment and the abscission zones in the plant.
messages: chloroplast stroma

3702:AT4G20740
gene id: 3702:AT4G20740
uniprot id: A0A5S9XUA3
uniprot id: Q9SVH3
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT2G03780
gene id: 3702:AT2G03780
uniprot id: A0A1P8AX63
uniprot id: A0A1P8AX91
uniprot id: A0A654ET18
uniprot id: Q8GZ75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the translin family.
messages: Nucleus

3702:AT1G06150
gene id: 3702:AT1G06150
uniprot id: P0C7P8
names: Disruption Phenotype
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bHLH protein family. LHW subfamily.
messages: Homodimer.
messages: Nucleus
messages: Pale yellow-green embryos arrested at mature cotyledon steps.
messages: Sequencing errors.
messages: Transcription factor that may regulate root development.

3702:AT3G18040
gene id: 3702:AT3G18040
uniprot id: A0A1I9LRW0
uniprot id: A0A1I9LRW1
uniprot id: A0A1I9LRW2
uniprot id: Q9LV37
names: Activity Regulation
names: Domain
names: PTM
names: Similarity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-185 and Tyr-187, which activates the enzyme.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.

3702:AT3G60890
gene id: 3702:AT3G60890
uniprot id: Q9LZX5
names: Function
names: Induction
names: Subunit
messages: Competitive inhibitor of the HD-ZIPIII transcription factors in shoot apical meristem (SAM) development. Acts by forming non-functional heterodimers. Part of a negative feedback loop. Essential for proper functioning of stem cells in the SAM.
messages: Interacts with REV.
messages: Up-regulated in response to increased HD-ZIPIII activity (PubMed:18055602). Up-regulated by REV (PubMed:22781836).

3702:AT5G47077
gene id: 3702:AT5G47077
uniprot id: P82721
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT1G22830
gene id: 3702:AT1G22830
uniprot id: Q4V389
names: Similarity
messages: Belongs to the PPR family. PCMP-E subfamily.

3702:AT2G32310
gene id: 3702:AT2G32310
uniprot id: F4ISV4
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G24360
gene id: 3702:AT5G24360
uniprot id: F4KH40
uniprot id: F4KH41
uniprot id: Q93VJ2
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By ER stress inducer tunicamycin, by salicylic acid (SA) and by bacterial pathogen infection.
messages: Endoplasmic reticulum membrane
messages: Homodimer; disulfide-linked. Dimer formation is driven by hydrophobic interactions within the N-terminal luminal domains and stabilized by disulfide bridges (By similarity).
messages: Membrane
messages: No visible phenotype. Ire1a and ire1b double mutant is more sensitive to the ER stress inducer tunicamycin than the wild-type and is enable to give rise to the spliced bZIP60 mRNA form (PubMed:22355548). Ire1a and ire1b double mutant displays short roots and a ER stress-sensitive phenotype (PubMed:21914012).
messages: Senses unfolded proteins in the lumen of the endoplasmic reticulum via its N-terminal domain which leads to enzyme auto-activation. The active endoribonuclease domain splices bZIP60 mRNA to generate a new C-terminus, converting it into a potent unfolded-protein response transcriptional activator which then induces transcription of UPR target genes. Involved in organ growth regulation. Plays a role in plant immunity and abiotic stress responses. Required for ER stress-induced autophagy.
messages: The kinase domain is activated by trans-autophosphorylation. Kinase activity is required for activation of the endoribonuclease domain (By similarity).
messages: Ubiquitous. Detected in the apical meristem, at leaf margins where vascular bundles end, in the anthers before pollen is formed and in the ovules at a very early stage of development. There is no expression in more mature embryos. Also strongly expressed in the cotyledons immediately after germination but not later on.

3702:AT4G11680
gene id: 3702:AT4G11680
uniprot id: Q93Z92
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Mediates E2-dependent protein ubiquitination in vitro.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G72820
gene id: 3702:AT1G72820
uniprot id: A0A384KMH3
uniprot id: Q9SSP4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G35050
gene id: 3702:AT4G35050
uniprot id: A0A5S9Y0Y7
uniprot id: O22469
uniprot id: Q5HZ33
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
messages: Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA.
messages: Nucleus
messages: The DWD box is required for interaction with DDB1A.

3702:AT3G49360
gene id: 3702:AT3G49360
uniprot id: A0A5S9XJ83
uniprot id: Q8LG70
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
messages: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
messages: No visible phenotype under normal growth conditions.
messages: cytosol

3702:AT4G03400
gene id: 3702:AT4G03400
uniprot id: A0A178UXE0
uniprot id: Q9ZNS2
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the IAA-amido conjugating enzyme family.
messages: Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin (By similarity). Involved in red light-specific hypocotyl elongation. May act downstream of a red light signal transduction and determine the degree of hypocotyl elongation (PubMed:14581632).
messages: Expressed in cotyledons and hypocotyls.

3702:AT4G26160
gene id: 3702:AT4G26160
uniprot id: Q8LEK4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family.
messages: The active site contains a CGSC motif wich differs from the conserved CGPC motif.
messages: Thiol-disulfide oxidoreductase that may participate in various redox reactions. Possesses insulin disulfide bonds reducing activity.
messages: chloroplast stroma

3702:AT5G62020
gene id: 3702:AT5G62020
uniprot id: A0A384KDZ5
uniprot id: C0SVV5
uniprot id: Q9SCW4
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class B subfamily.
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT5G15020
gene id: 3702:AT5G15020
uniprot id: F4K8B0
uniprot id: Q9LFQ3
names: Function
names: Sequence Caution
names: Subcellular Location Annotation
messages: Acts as a transcriptional repressor. Plays roles in regulating gene expression and genome stability (By similarity).
messages: Intron retention.
messages: Nucleus

3702:AT1G19700
gene id: 3702:AT1G19700
uniprot id: A0A654EBF2
uniprot id: Q9FXG8
names: Domain
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TALE/BELL homeobox family.
messages: Interacts with TLP1. May form heterodimeric complexes with TALE/KNOX proteins (By similarity). Interacts with OFP1, OFP2, OFP4 and OFP5.
messages: May be due to a competing acceptor splice site.
messages: Nucleus
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.

3702:AT2G35370
gene id: 3702:AT2G35370
uniprot id: A0A178VV72
uniprot id: P25855
names: Activity Regulation
names: Cofactor
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Highly expressed in leaves, lower expression in green veins, petioles, and stems, and detected in roots.
messages: Inhibited by harpin, S-nitrosoglutathione (GSNO), nitric oxide, N-ethylmaleimide and 5,5'-dithiobis-(2-nitrobenzoic acid).
messages: Mitochondrion
messages: S-nitrosylated and/or glutathionylated at unknown positions in response to nitric oxide.
messages: The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.
messages: The glycine decarboxylase (GDC) or glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: Up-regulated by light.

3702:AT1G31820
gene id: 3702:AT1G31820
uniprot id: Q9C6S4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Polyamine:cation symporter (PHS) (TC 2.A.3.12) family.
messages: Cell membrane
messages: Probable cell membrane polyamine/proton symporter involved in the polyamine uptake in cells.

3702:AT1G46264
gene id: 3702:AT1G46264
uniprot id: A0A654ELC5
uniprot id: C0SUZ6
uniprot id: Q9C635
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class B subfamily.
messages: Cytoplasm
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain.
messages: Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT2G27380
gene id: 3702:AT2G27380
uniprot id: Q9ZQI0
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the extensin family.
messages: May have a specific role in modifying the cell-wall structure, specifically during seed germination, thus facilitating radicle protrusion.
messages: Specifically expressed in endosperm during seed germination, at the site of radicle protrusion.
messages: Under positive control of gibberellic acid.
messages: primary cell wall

3702:AT1G10400
gene id: 3702:AT1G10400
uniprot id: A0A384L396
uniprot id: Q9SY84
uniprot id: W8Q3T6
names: Caution
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G21880
gene id: 3702:AT1G21880
uniprot id: Q93ZH0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Cell membrane
messages: GPI-anchored form.
messages: Impaired sensitivity to peptidoglycans (PGNs) leading to higher susceptibility to infection with virulent Pseudomonas syringae pv. tomato DC3000.
messages: Interacts with peptidoglycans.
messages: May be due to a competing donor splice site. Has no GPI-anchor.
messages: Required as a cell surface receptor for peptidoglycan (PGN) elicitor signaling leading to innate immunity. Plays an essential role in detecting PGNs and restricting bacterial growth (of Pseudomonas syringae pv. tomato DC3000 for example).
messages: Secreted

3702:AT4G26230
gene id: 3702:AT4G26230
uniprot id: A0A384LIW9
uniprot id: Q0WRN2
uniprot id: Q9STR1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL31 family.

3702:AT1G80410
gene id: 3702:AT1G80410
uniprot id: Q8VZM1
names: Disruption Phenotype
names: Function
names: Induction
names: Subunit
names: Tissue Specificity
messages: Auxiliary subunit of the NatA N-alpha-acetyltransferase complex. Required for male gametocyte development, embryogenesis, suspensor development and the formation of the quiescent center (QC) in the root meristem (PubMed:27385766, PubMed:27610925). Involved in plant immunity through the regulation of SNC1 stability (PubMed:25966763). Required for embryo development (PubMed:15266054).
messages: Down-regulated upon abscisic acid treatment.
messages: Embryo lethal when homozygous.
messages: Expressed in leaves, roots, shoots and flowers.
messages: Part of the NatA complex. Associates with ribosomes. Interacts with NAA10.

3702:AT3G48330
gene id: 3702:AT3G48330
uniprot id: A0A1I9LP18
uniprot id: A0A1I9LP19
uniprot id: Q42539
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.
messages: By abscisic acid (ABA).
messages: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Contributes to seed longevity and germination vigor by limiting the abnormal accumulation of the L-isoaspartyl residues in seed proteins.
messages: Cytoplasm
messages: Expressed in roots, rosette leaves, stems, cauline leaves, flowers and developing seeds.
messages: Monomer.
messages: Seeds over-expressing PIMT1 have reduced accumulation of L-isoaspartyl residues in seed proteins and increased seed longevity and germination vigor. Conversely, reduced PIMT1 expression is associated with an increase in the accumulation of L-isoaspartyl residues in proteins, leading to increased sensitivity to aging treatments and loss of seed vigor under stressful germination conditions (PubMed:19011119).

3702:AT1G06490
gene id: 3702:AT1G06490
uniprot id: A0A384L982
uniprot id: E9KSP0
uniprot id: Q9SHJ3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 48 family.
messages: Cell membrane
messages: Involved in callose synthesis at the forming cell plate during cytokinesis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals (By similarity).
messages: Membrane

3702:AT2G16210
gene id: 3702:AT2G16210
uniprot id: Q5BPT7
names: Miscellaneous
names: Subcellular Location Annotation
messages: May be due to an intron retention.
messages: Nucleus

3702:AT5G50760
gene id: 3702:AT5G50760
uniprot id: A0A178UEA1
uniprot id: Q9LUE5
names: Similarity
messages: Belongs to the ARG7 family.

3702:AT5G14440
gene id: 3702:AT5G14440
uniprot id: A0A178U9Q1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G75690
gene id: 3702:AT1G75690
uniprot id: Q8GSJ6
names: Cofactor
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the BSD2 chaperone family.
messages: Binds 2 Zn(2+) ions per monomer.
messages: Interacts with the photosystem II core subunits (PubMed:21586683). Interacts with HHL1 (PubMed:24632535).
messages: Its sequence is related to the DnaJ family but lacks the J domain. The CR-type-like region is similar to CR-type zinc-fingers and was shown to bind zinc (PubMed:21586683).
messages: Lower maximum photochemical efficiency of photosystem II after high-light treatment.
messages: Not induced by high-light treatment.
messages: Protein disulfide-isomerase probably involved upon formation of a complex with HHL1 in maintaining photosystem II (PSII) activity under high light by regulating repair and reassembly of PSII complexes.
messages: chloroplast thylakoid membrane

3702:AT1G08610
gene id: 3702:AT1G08610
uniprot id: Q9FRS4
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G47670
gene id: 3702:AT1G47670
uniprot id: Q9SX98
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Amino acid transporter.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane

3702:AT3G23325
gene id: 3702:AT3G23325
uniprot id: A0A654F9Z1
uniprot id: Q9LW64
names: Miscellaneous
names: Similarity
messages: Belongs to the SF3B5 family.
messages: Was originally fused with At3g23315 to form At3g23320.

3702:AT2G38840
gene id: 3702:AT2G38840
uniprot id: F4ITY5
names: Similarity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3 GTPase family.

3702:AT2G21140
gene id: 3702:AT2G21140
uniprot id: Q9SKP9
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant proline-rich protein superfamily.
messages: In young seedlings, detected in the hypocotyl, cotyledons and rosette leaves,mostly in expanding leaves. At flowering time, expressed in stems, cauline leaves, sepals, and, in closed flowers only, in anthers. Later present in pedicels of developing siliques, nectaries, and along the length of maturing siliques.
messages: Mostly expressed in aerial organs, particularly in expanding leaves, stems, flowers, and siliques.
messages: cell wall

3702:AT3G10860
gene id: 3702:AT3G10860
uniprot id: A0A384LQF6
uniprot id: Q9SG91
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UQCRQ/QCR8 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Membrane
messages: Mitochondrion inner membrane

3702:AT5G45680
gene id: 3702:AT5G45680
uniprot id: Q9SCY2
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FKBP-type PPIase family.
messages: Expressed in stems, leaves and developing flower buds, but not in roots.
messages: Interacts in vitro with LTO1 (PubMed:25412899). The precursor, but not the mature form of the protein, interacts with the Rieske protein.
messages: PPIase activity is optimal in oxidized form (S-S) and minimal in reduced form (SH). Reduction of the oxidized form is mediated by thioredoxin (TRX-M).
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Responsive of the major PPIase activity in the chloroplast thylakoid lumen. Regulates the accumulation of Rieske protein, an essential component of the photosynthetic electron transport chain.
messages: The interaction between FKBP and the Rieske protein probably occurs before they are imported into the thylakoid.
messages: chloroplast thylakoid lumen

3702:AT4G12420
gene id: 3702:AT4G12420
uniprot id: A0A178V188
uniprot id: Q9SU40
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multicopper oxidase family.
messages: Cell membrane
messages: Expressed in roots, hypocotyls, cotyledons, leaves, stems and flowers.
messages: May be a monocopper oxidase of unknown specificity. Involved in directional growth processes, possibly by participating in cell wall expansion.
messages: cell wall

3702:AT3G43850
gene id: 3702:AT3G43850
uniprot id: A0A1I9LQ12
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G17260
gene id: 3702:AT1G17260
uniprot id: A0A178W776
uniprot id: Q43128
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Cell membrane
messages: Found primarily in developing seeds.
messages: Membrane
messages: The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses.

3702:AT1G76950
gene id: 3702:AT1G76950
uniprot id: Q947D2
names: Function
names: Tissue Specificity
messages: Binds to phosphatidic acid and to phosphoinositides such as PtdIns3P, PtdIns(3,4)P(2), PtdIns(3,4,5)P(3) and PtdIns(4,5)P(2). Catalyzes guanine nucleotide exchange on specific Rab proteins.
messages: Mostly expressed in flowers, and, to a lower extent, in stems, leaves, siliques, seeds.

3702:AT5G05980
gene id: 3702:AT5G05980
uniprot id: F4K2A1
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: A monovalent cation.
messages: Belongs to the folylpolyglutamate synthase family.
messages: Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis. Required for postembryonic root development. Generates polyglutamylated folate cofactors to support C1 metabolism required for meristem maintenance and cell expansion during postembryonic root development.
messages: Expressed in both shoots and roots, but expression in roots is higher compared with shoots. Distinct expression in the quiescent center (QC) region of the root tip. Also expressed in vascular tissues of the cotyledons and hypocotyls, and the first true leaves of 7 days old seedlings.
messages: Has short primary roots. Root hairs are also short and wavy. Epidermal cells of wild-type roots are two times longer than epidermal cells of the mutant roots. Short primary roots of the mutant are impaired in F-actin organization due to extensive bundling. Reduced primary root growth of mutants indicate defects in both cell division and cell expansion. Total folate content does not significantly change between the wild-type and mutant in either shoots or roots. However, differences in the accumulation patterns of some folate classes, and general changes in the contribution of each folate class to the total folate pool are found. A considerable increase in total monoglutamylated folates in mutant roots when compared with wild-type is found. This difference is not observed in shoots. Total polyglutamylated folate content is not altered in either tissue. Nucleotides and amino acids are generally depleted in mutant. Vegetative phenotype does not differ visually from wild-type. Polyglutamylated folates are still detectable in the disruption mutant. In comparison to wild-type, the plastid and mitochondrial folate levels are reduced by approximately 50 and 25%, respectively. Folate polyglutamylation levels are significantly reduced but not abolished within the respective compartments. Combined loss of FPGS1 and FPGS2 result in embryo lethality. This double mutant has abnormal seeds that are readily distinguishable as albinos which do not proceed beyond the globular stage of embryogenesis. The absence of a developing embryo lead to collapse of seed walls, leaving shrivelled seed reamnants. FPGS1 and FPGS3 double mutant exhibits dwarfed leaves, late flowering (approximately 13 days after wild-type), reduced fecundity and delayed senescence. Pollination with FPGS1 and FPGS3 double mutant pollen yield at most one or two seeds per silique compared to the yield of full siliques when wild-type stigmas are pollinated with wild-type pollen. There is a 40% reduction in the total of …
messages: chloroplast

3702:AT2G33030
gene id: 3702:AT2G33030
uniprot id: A0A178VT33
uniprot id: O48763
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Could be the product of a pseudogene. Lacks the signal peptide and part of the extracellular leucine-rich repeats that are required for the specificity of the elicitor protein recognition, which are conserved features of the family.
messages: Involved in perception of extracellular signals.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G08150
gene id: 3702:AT4G08150
uniprot id: P46639
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/KNOX homeobox family.
messages: Expressed in the vegetative meristem. Present in the base of flower primordia (PubMed:26390296).
messages: May form heterodimeric complex with the TALE/BELL proteins BEL1, BLH2, BLH8/PNF and BLH9/PNY (PubMed:11701881, PubMed:12897247, PubMed:16741748, PubMed:17873098). Interacts with OFP1, OFP2, OFP4, OFP6 and OFP12 (PubMed:15781858). Interacts with CCT7 and CCT8 (PubMed:21868675). Interacts with KNATM-B (PubMed:18398054). Binds to AGO10/PNH (PubMed:26390296). Interacts with BZIP30 (PubMed:27402171).
messages: May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state, and its expression disappears at the same time the shoot apex undergoes the transition from vegetative to reproductive development (PubMed:11934861). Positive regulator of LATERAL ORGAN BOUNDARIES (LOB) (PubMed:11934861). Probably binds to the DNA sequence 5'-TGAC-3' (PubMed:11934861). Able to traffic from the L1 to the L2/L3 layers of the meristem, presumably through plasmodesmata (PubMed:12900451).
messages: Negatively regulated by ASYMMETRIC LEAVES1 (AS1) and ASYMMETRIC LEAVES2 (AS2).
messages: Nucleus

3702:AT2G20430
gene id: 3702:AT2G20430
uniprot id: Q1PF35
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in flowers and pollen.
messages: Functions as downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Is involved in pollen tube growth regulation through its interaction with ARAC11/ROP1.
messages: Interacts with ARAC11/ROP1.
messages: Over-expression of RIC6 in tobacco germinating pollen reduces pollen tube elongation.

3702:AT3G30842
gene id: 3702:AT3G30842
uniprot id: Q7PC85
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
messages: Expressed in roots and siliques at low levels.
messages: May be a general defense protein.
messages: Membrane

3702:AT1G06530
gene id: 3702:AT1G06530
uniprot id: Q9SHJ6
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer. Interacts with PMD1.
messages: Involved in morphogenesis and proliferation of mitochondria. Does not act redundantly with PMD1. Is not involved in peroxisomal proliferation.
messages: Mitochondrion outer membrane
messages: Plant cells silencing PMD2 show enlarged mitochondria.

3702:AT5G28650
gene id: 3702:AT5G28650
uniprot id: Q93WU6
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT1G69220
gene id: 3702:AT1G69220
uniprot id: O24527
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylates.
messages: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
messages: Cell membrane
messages: Dwarf plants with reduced cell numbers, endoreduplication and cell expansion leading to a slow growth (PubMed:26685188, PubMed:30212650). Altered pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) signaling characterized by a compromised ability to elicit a reactive oxygen species (ROS) burst in response to microbial features (e.g. flg22) (PubMed:30212650). Enhanced resistance to the bacterial pathogen Pseudomonas syringae pv. tomato DC3000 (Pst) due to high levels of salicylic acid (SA) and subsequent constitutive expression of pathogenesis-related genes (e.g. PR1) and associated with reduced jasmonic acid (JA) levels (PubMed:30212650). The double mutant sik1 mob1a is arrested at the seedling stage (PubMed:26685188).
messages: Early endosome
messages: In seedlings, observed in the hypocotyls of both etiolated and light-grown plants (PubMed:26685188). Also expressed in the quiescent center and the maturation zone of primary roots (PubMed:26685188). Later present in cotyledons and the first pair of true leaves (PubMed:26685188). Accumulates strongly in mature rosette leaves (PubMed:26685188). Detected in the pollen of opened flowers (PubMed:26685188). Lower levels in dividing tissues (PubMed:26685188). Present in developed vascular tissues, stipules of true leaves, mature trichomes and guard cells (PubMed:26685188).
messages: Interacts with MOB1A and MOB1B via its N-terminal region at the plasma membrane and in the nucleus (PubMed:26685188). Binds to BIK1 to phosphorylate and stabilize it (PubMed:30212650). Interacts with and phosphorylates RBOHD upon flagellin perception to activate it (PubMed:30212650).
messages: Mostly expressed in mature tissues of roots, shoots, hypocotyls, cotyledons, stems, leaves and flowers, as well as in the shoot apical meristem (SAM).
messages: Nucleus
messages: Serine/threonine-protein kinase (PubMed:30212650). Regulates organ size in coordination with MOB1A by modulating cell proliferation and cell expansion, possibly by facilitating cell cycle exit (PubMed:26685188). Positive regulator of the pathogen-associated molecular pattern (PAMP, e.g. flg22)-triggered immunity (PTI) signaling by stabilizing BIK1 and activating RBOHD by phosphorylation to promote the extracellular reactive oxygen species (ROS) burst involved in defense responses to bacterial infection (PubMed:30212650).
messages: trans-Golgi network

3702:AT2G40060
gene id: 3702:AT2G40060
uniprot id: A0A178W0Q3
uniprot id: O04209
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the clathrin light chain family.
messages: Cell membrane
messages: Clathrin coats are formed from molecules containing 3 heavy chains and 3 light chains (By similarity). Interacts with TPLATE and CHC2.
messages: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
messages: Cytoplasmic vesicle membrane
messages: Expressed in root epidermal cells and root hairs (at the protein level).
messages: coated pit
messages: phragmoplast

3702:AT1G56560
gene id: 3702:AT1G56560
uniprot id: Q9FXA8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 100 family.
messages: By hydrogen peroxide (H(2)O(2)).
messages: Expressed in seedlings, roots and flowers.
messages: Mitochondrial invertase that cleaves sucrose into glucose and fructose and is involved in the regulation of multiple tissue development and floral transition. May generate glucose as a substrate for mitochondria-associated hexokinase, contributing to mitochondrial reactive oxygen species homeostasis.
messages: Mitochondrion
messages: Reduced primary root length and number of lateral roots. Reduced plant growth, delayed flowering, increased expression of antioxidant genes under basal conditions and reduced oxygen consumption in the dark.

3702:AT3G42790
gene id: 3702:AT3G42790
uniprot id: A0A178VCG6
uniprot id: Q9M2B4
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Alfin family.
messages: Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
messages: Lacks the Tyr (here Asp-204), a conserved feature of the aromatic cage required for the interaction with histone H3K4me3/2.
messages: Nucleus
messages: The PHD-type zinc finger mediates the binding to H3K4me3.
messages: Ubiquitously expressed.

3702:AT5G04530
gene id: 3702:AT5G04530
uniprot id: Q9LZ72
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
messages: Expressed in siliques.
messages: Membrane
messages: Repressed by herbicides such as flufenacet and benfuresate (PubMed:12916765). Down-regulated by low temperature, osmotic stress, salt and darkness (PubMed:18465198).

3702:AT4G21320
gene id: 3702:AT4G21320
uniprot id: A0A178UV51
uniprot id: Q8GWL1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: Accumulates after heat shock (HS) (PubMed:16500991, PubMed:23073024). Enhanced translation during recovery after heat treatment mediated by CLPB1 in a positive feedback loop (PubMed:23439916).
messages: Belongs to the phosphosulfolactate synthase family.
messages: Normal growth and development under nonstress conditions. Compromised acquired thermotolerance following a long recovery period (> 24 h) after acclimation heat shock (HS) treatment, but normal when challenged within a short recovery period (PubMed:16500991, PubMed:17085506). Reduced expression of several highly heat-inducible genes. Slight increased in sensitivity to HS without acclimation (PubMed:17085506). Faster degradation of HSP101 (PubMed:23439916).
messages: Transactivator required, together with HSP101, for long-term acquired thermotolerance (LAT) maintenance, probably by regulating heat-inducible genes expression, thus being a cellular component of thermomemory.

3702:AT5G20165
gene id: 3702:AT5G20165
uniprot id: A0A178UA21
uniprot id: A0A384L7N9
uniprot id: A8MSB3
uniprot id: F4K459
uniprot id: Q6IDB1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KISH family.
messages: Golgi apparatus membrane
messages: Involved in the early part of the secretory pathway.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G25780
gene id: 3702:AT4G25780
uniprot id: A0A654FSQ8
uniprot id: Q9SW05
names: Function
messages: Probably involved in the defense reaction of plants against pathogens.

3702:AT5G37910
gene id: 3702:AT5G37910
uniprot id: Q9FKD5
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT1G51590
gene id: 3702:AT1G51590
uniprot id: A0A178W2E7
uniprot id: Q9C512
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 47 family.
messages: Ca(2+) or Mn(2+). Mg(2+) can be used to a lesser extent.
messages: Class I alpha-mannosidase essential for early N-glycan processing. Progressively trims alpha-1,2-linked mannose residues. Produces Man(5)GlcNAc(2) from Man(8)GlcNAc(2), but only Man(6)GlcNAc(2) from Man(9)GlcNAc(2). Has difficulty acting on the terminal mannose of the b-branch. Involved in root development and cell wall biosynthesis.
messages: Expressed in flowers, siliques, stems, leaves, roots, pollen grains, shoot apical meristems, hypocotyls and upper region of the root.
messages: Golgi apparatus membrane
messages: Inhibited by kifunensine and 1-deoxymannojirimycin, but not by swainsonine.
messages: No visible phenotype; due the redundancy with MNS2. Lack of complex N-glycans, shorter roots and increased lateral root formation in mns1 and mns2 double mutants.

3702:AT5G17200
gene id: 3702:AT5G17200
uniprot id: Q9FFI9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT3G19820
gene id: 3702:AT3G19820
uniprot id: Q39085
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DIMINUTO family.
messages: Dwarf and reduced fertility.
messages: Interacts with calmodulin.
messages: Microsome membrane
messages: Plays a critical role in the general process of plant cell elongation. Involved in the synthesis of campesterol, an early precursor of brassinolide. Required for the conversion of 24-methylenecholesterol to campesterol and for the conversion of isofucosterol to sitosterol. Necessary for both the isomerization and reduction of 24-methylenecholesterol. Regulates indirectly phytochrome-mediated light responses through the modulation of brassinosteroid biosynthesis.

3702:AT2G22425
gene id: 3702:AT2G22425
uniprot id: A0A178VPE5
uniprot id: Q944J0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SPCS1 family.
messages: Component of the signal peptidase complex (SPC) composed of a catalytic subunit SEC11 and three accessory subunits SPCS1, SPCS2 and SPCS3. The complex induces a local thinning of the ER membrane which is used to measure the length of the signal peptide (SP) h-region of protein substrates. This ensures the selectivity of the complex towards h-regions shorter than 18-20 amino acids.
messages: Component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (By similarity). Dispensable for SPC enzymatic activity (By similarity).
messages: Endoplasmic reticulum membrane
messages: Membrane

3702:AT1G80300
gene id: 3702:AT1G80300
uniprot id: A0A654ES94
uniprot id: Q0WW68
uniprot id: Q39002
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ADP/ATP translocase tlc (TC 2.A.12.2) family.
messages: Belongs to the ADP/ATP translocase tlc family.
messages: May function as an ATP importer.
messages: Membrane
messages: chloroplast membrane

3702:AT3G55990
gene id: 3702:AT3G55990
uniprot id: A0A178VA79
uniprot id: Q9LY46
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Expressed in roots, young seedlings, leaves, stems, flowers and developing siliques. Specifically expressed in secondary wall-forming cells, xylem and interfascicular fibers.
messages: Golgi apparatus membrane
messages: Not induced during cold acclimation.
messages: Strong constitutive freezing tolerance. Altered vascular apparatus morphology, and reduced xylan acetylation and secondary wall thickening. Reduced rosette-leaf growth and inflorescence size.
messages: Xylan acetyltransferase required for 2-O- and 3-O-monoacetylation of xylosyl residues in xylan (PubMed:23659919, PubMed:30083810, PubMed:32354790). Catalyzes the 2-O-acetylation of xylan, followed by nonenzymatic acetyl migration to the O-3 position, resulting in products that are monoacetylated at both O-2 and O-3 positions (PubMed:32354790). Is necessary for the formation of the functional xylem, which is required for water transport to aerial tissues (PubMed:21408051, PubMed:23340742). Acts as negative regulator of cold acclimation (PubMed:17316173). Involved in water economy as well as salt tolerance (PubMed:19061521, PubMed:19054354). Regulated at the transcriptional level by NAC012/SND1 (Probable).

3702:AT5G61400
gene id: 3702:AT5G61400
uniprot id: A0A178UEG8
uniprot id: Q9FLJ4
names: Caution
names: Similarity
messages: Belongs to the PPR family. P subfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G48700
gene id: 3702:AT5G48700
uniprot id: A0A5S9YEI6
uniprot id: Q9FKC6
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Cytoplasm
messages: Interacts with SAE2, SCE1, SIZ1 and MMS21 Covalently attached to a number of proteins.
messages: Nucleus
messages: Stress conditions rapidly and substantially elevates the amount of SUMO1 and SUMO2 conjugates with a concomitant reduction in the amount of free SUMO proteins. The SUMO conjugation system plays an important function in stress protection and/or repair.
messages: Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity).

3702:AT1G57765
gene id: 3702:AT1G57765
uniprot id: A0A178WCE7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G78420
gene id: 3702:AT1G78420
uniprot id: Q93YV5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Subunit
messages: 'Da' means 'large' in Chinese (PubMed:24045020). Plants overexpressing DA2 exhibit reduced organ size, biomass, and seed size and weight (PubMed:24045020).
messages: E3 ubiquitin-protein ligase involved in the regulation of organ and seed size. Acts synergistically with DA1 to regulate seed size. Functions synergistically with DA1 to restrict cell proliferation in the maternal integuments of ovules and developing seeds. Seems to function independently of BB. Possesses E3 ubiquitin-protein ligase activity in vitro (PubMed:24045020). Polyubiquitinates DA1, DAR1 and DAR2, but not DAR3 (PubMed:28167503).
messages: Highly expressed during early stages of petal, stamen, carpel and ovule development, and expression decreases at the later stages of organ development.
messages: Increased organ size, biomass, and seed size and weight.
messages: Interacts with DA1 (via C-terminus).

3702:AT4G12490
gene id: 3702:AT4G12490
uniprot id: A0A178URY1
uniprot id: Q9SU34
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family. PEARLI1 subfamily.
messages: Probable lipid transfer protein (LTP). May improve freezing survival. Seems to control the flowering process and lignin synthesis. Confers resistance to Botrytis cinerea.
messages: Reduced cutin accumulation due to lower cutin biosynthesis. Early flowering in long-day conditions.
messages: Transient accumulation in response to a brief exposures to cold.
messages: cell wall

3702:AT5G27200
gene id: 3702:AT5G27200
uniprot id: O04652
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group (By similarity).
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: No visible phenotype under normal growth conditions.
messages: chloroplast

3702:AT1G34310
gene id: 3702:AT1G34310
uniprot id: C0SUZ1
uniprot id: Q9XID4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT1G55330
gene id: 3702:AT1G55330
uniprot id: A0A178W6X6
uniprot id: Q9C8A4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AG-peptide AGP family.
messages: Cell membrane
messages: Contains 4-hydroxyproline; hydroxylated on Pro-30, Pro-32 and Pro-34.
messages: Membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT1G32200
gene id: 3702:AT1G32200
uniprot id: Q43307
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GPAT/DAPAT family.
messages: Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate (Probable). The enzyme from chilling-resistant plants discriminates against non-fluid palmitic acid and selects oleic acid whereas the enzyme from sensitive plants accepts both fatty acids. This is an oleate-selective acyltransferase.
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: chloroplast stroma

3702:AT1G67530
gene id: 3702:AT1G67530
uniprot id: Q9CAG5
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT3G04545
gene id: 3702:AT3G04545
uniprot id: Q2V3Y8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G16540
gene id: 3702:AT4G16540
uniprot id: O23498
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

3702:AT1G34790
gene id: 3702:AT1G34790
uniprot id: A0A654ER07
uniprot id: Q8VWG3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WIP C2H2-type zinc-finger protein family.
messages: Can form homodimers. Interacts with MYB75, TT2 and TT16.
messages: Developing ovules and young seeds.
messages: Lack of flavanoid pigment accumulation in the seed coat endothelium (transparent testa phenotype).
messages: May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat (PubMed:21477081). Plays a role in the regulatory network controlling flavonoid accumulation in endothelium cells during seed development (PubMed:21477081).
messages: Nucleus
messages: Restricted to the endothelium, the innermost cell layer of the seed coat and detected to a lesser extent in the other cell layers of the testa.

3702:AT1G55570
gene id: 3702:AT1G55570
uniprot id: Q9ZVV4
names: Similarity
messages: Belongs to the multicopper oxidase family.

3702:AT4G38240
gene id: 3702:AT4G38240
uniprot id: A0A654FWP6
uniprot id: F4JTL6
uniprot id: Q9XGM8
uniprot id: W8Q2W3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 13 family.
messages: Creation of a second N-glycosylation site in mutant cgl1 C5/cgl1-1 interferes with protein folding and sequesters the protein for degradation in the endoplasmic reticulum.
messages: Expressed in roots, stems, leaves and flowers.
messages: Glycosylated.
messages: Golgi apparatus membrane
messages: Initiates complex N-linked carbohydrate formation. Essential for the conversion of high-mannose to hybrid and complex N-glycans.
messages: Initiates complex N-linked carbohydrate formation. Essential for the conversion of high-mannose to hybrid and complex N-glycans. Required for normal root growth and morphology.
messages: Membrane
messages: Plants have an increased salt-sensitivity resulting in growth inhibition, aberrant root-tip morphology and callose accumulation.
messages: The cofactor is mostly bound to the substrate.

3702:AT1G66630
gene id: 3702:AT1G66630
uniprot id: Q9C6H2
names: Domain
names: Function
names: Similarity
messages: Belongs to the SINA (Seven in absentia) family.
messages: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.
messages: The RING-type zinc finger domain is essential for ubiquitin ligase activity.
messages: The SBD domain (substrate-binding domain) mediates the homodimerization and the interaction with substrate proteins. It is related to the TRAF family.

3702:AT4G17790
gene id: 3702:AT4G17790
uniprot id: A0A178UZQ7
uniprot id: O23619
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G22230
gene id: 3702:AT2G22230
uniprot id: Q9SIE3
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.

3702:AT1G13755
gene id: 3702:AT1G13755
uniprot id: A0A178W637
uniprot id: Q9LMX3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G12340
gene id: 3702:AT1G12340
uniprot id: A0A5S9U091
uniprot id: Q3EDD7
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornichon family.
messages: Lacks one of the three transmembrane regions, which are conserved features of the family.
messages: Membrane

3702:AT3G10450
gene id: 3702:AT3G10450
uniprot id: A0A178V9Y2
uniprot id: A0A178VAE4
uniprot id: A0A1I9LLH5
uniprot id: A0A384KB05
uniprot id: F4J3S3
uniprot id: Q9SQX6
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Probable carboxypeptidase.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT2G15695
gene id: 3702:AT2G15695
uniprot id: Q8S8H8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM53 family.
messages: Membrane
messages: Nucleus outer membrane

3702:AT3G60640
gene id: 3702:AT3G60640
uniprot id: A0A178VL35
uniprot id: Q9LZZ9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG8 family.
messages: Constitutively expressed.
messages: Interacts with ATG4.
messages: The C-terminal 4 residues are removed by ATG4 to expose Gly-117 at the C-terminus. This Gly-117 forms then a thioester bond with the 'Cys-558' of ATG7 (E1-like activating enzyme) before being transferred to the 'Cys-258' of ATG3 (the specific E2 conjugating enzyme), in order to be finally amidated with phosphatidylethanolamine. This lipid modification anchors ATG8 to autophagosomes.
messages: Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
messages: Vacuole membrane
messages: autophagosome membrane
messages: cytoskeleton

3702:AT3G22740
gene id: 3702:AT3G22740
uniprot id: A0A7G2ENJ0
uniprot id: Q8LAX0
names: Cofactor
names: Function
names: Miscellaneous
names: Subunit
names: Tissue Specificity
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes methyl transfer from S-methylmethionine (SMM) to adenosyl-L-homocysteine (AdoMet). SMM degradation (by HMT-1, HMT-2 and HMT-3) and biosynthesis (by MMT1) constitute the SMM cycle in plants, which is probably required to achieve short term control of AdoMet level.
messages: Expressed predominantly in rosette leaves. Expressed in roots, cauline leaves and developing seeds.
messages: In contrast to HMT-1, it is not inhibited by methionine.
messages: Monomer.

3702:AT3G12400
gene id: 3702:AT3G12400
uniprot id: A0A178VBS4
uniprot id: A0A1I9LRG2
uniprot id: A0A1I9LRG3
uniprot id: Q9LHG8
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ubiquitin-conjugating enzyme family. UEV subfamily.
messages: Clustered trichomes and multinucleated cells.
messages: Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process (PubMed:17090720). Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs) (PubMed:17090720). May control nuclear division through the microtubule cytoskeleton (PubMed:17090720).
messages: Component of the endosomal sorting required for transport complex I (ESCRT-I), composed of ELC, VPS28 and VPS37 (PubMed:17090720). Interacts with VPS28 and VPS37 (PubMed:17090720). Binds ubiquitin in vitro (PubMed:17090720). Interacts with FREE1 (PubMed:25438943). Interacts with TOL9/TOM1D (PubMed:22639582). Interacts with BRO1/ALIX (PubMed:26902184, PubMed:17090720, PubMed:22639582, PubMed:25438943). Interacts with SINAT1, SINAT2, SINAT3 and SINAT4 (PubMed:32753431).
messages: Early endosome
messages: Endosome
messages: Expressed in roots, stems, leaves and flowers.
messages: Late endosome
messages: Prevacuolar compartment
messages: Ubiquitinated by SINAT1, SINAT2, SINAT3 and SINAT4 for subsequent proteasomal degradation.

3702:AT5G42610
gene id: 3702:AT5G42610
uniprot id: A0A5S9YA87
uniprot id: Q9FJV7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCU (TC 1.A.77) family.
messages: Membrane
messages: Mitochondrial inner membrane calcium uniporter that mediates calcium uptake into mitochondria. Constitutes a pore-forming and calcium-conducting subunit. Mitochondrial calcium homeostasis plays key roles in cellular physiology and regulates cell bioenergetics, cytoplasmic calcium signals and activation of cell death pathways.
messages: Mitochondrion inner membrane

3702:AT5G64640
gene id: 3702:AT5G64640
uniprot id: A0A654GE13
uniprot id: Q8L7Q7
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed during late developmental phases of siliques.
messages: Expressed in siliques.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: Membrane
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.

3702:AT5G16630
gene id: 3702:AT5G16630
uniprot id: A0A5S9Y4Q4
uniprot id: Q8W489
names: Function
names: Similarity
names: Subunit
messages: Belongs to the XPC family.
messages: Interacts with CML19. Calcium is required for this interaction.
messages: May have a role in the nucleotide excision repair (NER) pathway.

3702:AT1G63570
gene id: 3702:AT1G63570
uniprot id: Q9SH41
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT3G56170
gene id: 3702:AT3G56170
uniprot id: F4IZC5
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thermonuclease family.
messages: Binds 1 Ca(2+) ion per subunit.
messages: Cell membrane
messages: Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond. Possesses activity toward the single-stranded DNA, double-stranded DNA and RNA. May be involved in genomic DNA degradation during programmed cell death.
messages: Inhibited by Zn(2+).

3702:AT1G14390
gene id: 3702:AT1G14390
uniprot id: Q9M9S4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT5G51010
gene id: 3702:AT5G51010
uniprot id: A0A178UGM8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G53000
gene id: 3702:AT5G53000
uniprot id: Q8LDQ4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the IGBP1/TAP42 family.
messages: By chilling (PubMed:10517853). By abscisic acid (ABA) (PubMed:24357600).
messages: Highly expressed during seed maturation.
messages: Interacts with the 36 kDa catalytic subunit (subunit C) of PP2A (PubMed:10517853). Interacts with PP2A1 and PP2A2 (PubMed:24357600). Interacts with PP2A3, PPX1 and FYPP1 (PubMed:21216945, PubMed:24357600). Interacts with FYPP3 and ABI5 (PubMed:24357600). Interacts with ATPK1/S6K1 and ATPK2/S6K2 (PubMed:25399018). Interacts with TIP41L (By similarity).
messages: Involved in the positive regulation of the TOR signaling pathway (PubMed:21216945, PubMed:25399018). Acts as a negative regulator of PP2A catalytic activity (PubMed:10517853, PubMed:21216945, PubMed:24357600). Plays a positive role in the ABA-regulated inhibition of germination, probably throught its interaction with ABI5 (PubMed:24357600).
messages: Phosphorylated by TOR kinase in vitro.
messages: Plants over-expressing TAP46 exhibit an increased abscisic acid (ABA) sensitivity in seed germination and a reduced PP2A activity (PubMed:24357600). Over-expression of TAP46 also leads to the stimulation of the overall plant growth and the increased nitrogen-assimilating activities (PubMed:25399018).
messages: RNAi plants show the formation of spontaneous disease-like nectrotic lesions leading to premature cell death. The defective plants also display a strong reduction in protein synthesis, the induction of autophagy and nitrogen mobilization.
messages: Ubiquitous (PubMed:10517853). Highly expressed in seed, and particularly in the embryo (PubMed:24357600).

3702:AT3G46355
gene id: 3702:AT3G46355
uniprot id: A0A1I9LTT1
names: Similarity
messages: Belongs to the protein kinase superfamily.

3702:AT5G62180
gene id: 3702:AT5G62180
uniprot id: A0A654GDE8
uniprot id: Q9LVB8
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in roots, stems, flowers and siliques.

3702:AT1G33170
gene id: 3702:AT1G33170
uniprot id: A0A178WLJ1
uniprot id: Q9C884
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G39800
gene id: 3702:AT2G39800
uniprot id: A0A178VY37
uniprot id: B9DFG0
uniprot id: F4IFZ9
uniprot id: P54887
names: Function
names: Similarity
messages: In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
messages: In the N-terminal section; belongs to the glutamate 5-kinase family.
messages: P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants.

3702:AT5G61810
gene id: 3702:AT5G61810
uniprot id: A0A178UGX9
uniprot id: F4K509
uniprot id: Q9FLS8
names: Activity Regulation
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: By stress conditions.
messages: Calcium-dependent mitochondrial carrier protein that catalyzes the import of ATP co-transported with metal divalent cations across the mitochondrial inner membrane in exchange for phosphate (Pi) (PubMed:22062157, PubMed:28695448, PubMed:26140942, PubMed:26444389). Can transport phosphate, AMP, ADP, ATP, adenosine 5'-phosphosulfate and, to a lesser extent, other nucleotides (PubMed:26140942, PubMed:26444389). Binds calcium ions Ca(2+) (PubMed:22062157). Mediates also calcium uptake (By similarity).
messages: Counter-exchange transport activity is saturable and inhibited by pyridoxal-5'-phosphate, EDTA and EGTA (PubMed:26140942). Activated by calcium Ca(2+) and manganese Mn(2+) ions, and slightly by iron Fe(2+) and zinc Zn(2+) ions (PubMed:26140942, PubMed:28695448). Repressed by copper ions Cu(2+) and slightly by magnesium Mg(2+) ions (PubMed:28695448). Magnesium Mg(2+) ions promotes slightly ATP uptake, ATP-Mg(2+) being exchanged with ATP(4-) (PubMed:26444389).
messages: Expressed at high levels in flowers, leaves, stems, roots and seedlings, mostly in flowers.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Slightly expressed in vascular tissues, in leaves of both seedlings and mature plants, stamen filaments and developing siliques.
messages: The N-terminal domain can bind calcium.

3702:AT5G03810
gene id: 3702:AT5G03810
uniprot id: Q9FFN0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT4G35390
gene id: 3702:AT4G35390
uniprot id: A0A654FVR5
uniprot id: Q6DBQ1
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in seedlings, leaves, stems, floral tips and flowers.
messages: Homodimer. Interacts with AHL27 and AHL29.
messages: Nucleus
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity). Binds the DNA sequence GNFEI (GA-negative feedback element I) in the GA3OX1 promoter. Binding to GNFEI sequence is required for GA-negative feedback regulation of GA3OX1.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).

3702:AT5G47175
gene id: 3702:AT5G47175
uniprot id: A0A5S9YCW4
uniprot id: P82718
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G56590
gene id: 3702:AT5G56590
uniprot id: A0A5S9YEN0
uniprot id: Q9FJU9
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 17 family.
messages: Cell membrane
messages: Contains two additional disulfide bonds.
messages: cell wall

3702:AT4G09680
gene id: 3702:AT4G09680
uniprot id: A0A1P8B816
uniprot id: D0EL35
uniprot id: F4JKR3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CTC1 family.
messages: Component of the CST complex, a complex that binds to single-stranded DNA and is required to protect telomeres from DNA degradation. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves (PubMed:19854131). Associates with enzymatically active telomerase (PubMed:25329641).
messages: Component of the CST complex, composed of CTC1, TEN1 and STN1. Interacts with POT1A (PubMed:25329641).
messages: Nucleus
messages: Severe telomere deprotection accompanied by a rapid onset of developmental defects and sterility. The large majority of plants have grossly distorted floral phyllotaxy with an irregular branching pattern and fasciated (thick and broad) main and lateral stems and siliques. Although most mutants produce an influorescence bolt, this structure is highly variable in size, ranging from very short to wild-type. Flowers and siliques are often fused, and seed yield is typically reduced to 10% of wild-type. The germination efficiency of the few seeds that could be recovered was extremely low. Telomeric and subtelomeric tracts are dramatically eroded, and chromosome ends exhibit increased G overhangs, recombination, and end-to-end fusions.
messages: telomere

3702:AT4G08850
gene id: 3702:AT4G08850
uniprot id: Q8VZG8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in pollen tubes.
messages: Interacts with MDIS1 and LURE1.2.
messages: Involved in the pollen tube perception of the female signal.

3702:AT4G22590
gene id: 3702:AT4G22590
uniprot id: A0A178UWC3
uniprot id: Q9SUW0
names: Function
names: Induction
names: Similarity
messages: Belongs to the trehalose phosphatase family.
messages: By trehalose.
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

3702:AT3G10160
gene id: 3702:AT3G10160
uniprot id: F4J2K2
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: A monovalent cation.
messages: Belongs to the folylpolyglutamate synthase family.
messages: Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis.
messages: Mitochondrion inner membrane
messages: Mitochondrion matrix
messages: Vegetative phenotype does not differ visually from wild-type. No obvious defects in root development. Polyglutamylated folates still detectable, but loss of activity leads to a significant reduction (45%) in total foliar folate abundance compared to wild-type. The reduced total folate content is a result of reduced levels of 5-formyl-THF, 10-formyl and 5,10-methenyl-THF, 5-methyl-THF and THF (42, 42, 53 and 48%, respectively) compared to wild-type. The plastid and mitochondrial folate levels are also reduced by approximately 50 and 55%, respectively compared to wild-type. Folate polyglutamylation levels are significantly reduced but not abolished within the respective compartments. Combined loss of FPGS2 and FPGS1 result in embryo lethality. This double mutant has abnormal seeds that are readily distinguishable as albinos which do not proceed beyond the globular stage of embryogenesis. The absence of a developing embryo lead to collapse of seed walls, leaving shrivelled seed reamnants. Combined loss of FPGS2 and FPGS3 results in seedling lethality. Seedlings fail to proceed beyond the expanded cotyledon stage, exhibit an albino phenotype and are unable to thrive beyond germination.

3702:AT2G34970
gene id: 3702:AT2G34970
uniprot id: O64760
names: Similarity
messages: Belongs to the eIF-2B gamma/epsilon subunits family.

3702:AT1G55900
gene id: 3702:AT1G55900
uniprot id: Q8VYE2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TIM50 family.
messages: Component of the TIM17:23 complex at least composed of TIM23, TIM17 and TIM50. Interacts with TIM23-2.
messages: Essential component of the TIM17:23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
messages: Expressed in young cotyledons, roots, flowers and leaves.
messages: Mitochondrion inner membrane
messages: Up-regulated after antimycin A or rotenone treatments.

3702:AT5G27610
gene id: 3702:AT5G27610
uniprot id: Q6A331
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed ubiquitously in vegetative and reproductive tissues.
messages: Nucleus

3702:AT3G13682
gene id: 3702:AT3G13682
uniprot id: A0A5S9XCC8
uniprot id: Q9LID0
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the flavin monoamine oxidase family.
messages: Expressed in the shoot and root apical regions of young seedlings. Expressed in inflorescences.
messages: Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA (PubMed:17921315). Seems to act in partial redundancy with FLOWERING LOCUS D (FLD) to repress FLC expression (PubMed:17921315). Required for cytosine methylation of FWA (PubMed:17921315). Controls primary seed dormancy by regulating DOG1 and abscisic acid signaling-related genes (PubMed:25852712).

3702:AT1G75110
gene id: 3702:AT1G75110
uniprot id: A0A654EZT8
uniprot id: Q9C9Q5
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 77 family.
messages: Expressed in roots, rosette and cauline leaves, stems, flowers and siliques.
messages: Golgi apparatus membrane
messages: Plays a role in the arabinosylation of cell wall components (PubMed:17401635). Involved in the arabinosylation of extensin proteins in root hair cells. Extensins are structural glycoproteins present in cell walls and its arabinosylation is important for root hair cell development (PubMed:21680836).
messages: Reduced arabinose content in the insoluble cell wall fraction of meristematic region (PubMed:17401635). Reduced root hair length and content of arabinosylated extensins in root cell walls (PubMed:21680836).
messages: The conserved DXD motif is involved in enzyme activity.

3702:AT1G64740
gene id: 3702:AT1G64740
uniprot id: A0A178WLQ0
uniprot id: P11139
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: There are six genes coding for alpha-tubulin.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively.
messages: cytoskeleton

3702:AT5G05540
gene id: 3702:AT5G05540
uniprot id: Q9FFG1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-5' exonuclease degrading single-stranded small RNAs.
messages: Belongs to the REXO1/REXO3 family.
messages: No visible phenotype; due to the redundancy with other SDN ribonucleases. Simultaneous knockdown of SDN1, SDN2 and SDN3 results in elevated miRNA levels and pleiotropic developmental defects.
messages: Nucleus

3702:AT1G13450
gene id: 3702:AT1G13450
uniprot id: Q9FX53
names: Function
names: PTM
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
messages: Binds DNA as homodimer.
messages: Nucleus
messages: Phosphorylated on Thr-133 and Ser-198. Phosphorylation is calcium-dependent and increases DNA-binding activity 10 to 20-fold.
messages: Probable transcription factor that binds specifically to the core DNA sequence 5'-GGTTAA-3'. May act as a molecular switch in response to light signals.
messages: Sequencing errors.

3702:AT1G25580
gene id: 3702:AT1G25580
uniprot id: Q6NQK2
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed in shoot and root apical meristems, in lateral root primordia, in the vasculature of young leaves and in the root stele.
messages: Not induced by zeocin or ionizing radiation treatment.
messages: Nucleus
messages: Phosphorylated in a DNA stress-independent manner (PubMed:23907539, PubMed:24399300). Hyperphosphorylated on SQ motifs upon double-strand breaks, H(2)O(2) or zeocin treatments (PubMed:23907539, PubMed:24399300). Hyperphosphorylation is required for SOG1 function, and unlike constitutive phosphorylation, is ATM dependent (PubMed:23907539).
messages: The NAC domain includes a DNA-binding domain and a dimerization domain.
messages: Transcription factor regulating the transcriptional activation response to gamma irradiation (PubMed:19549833). Required for stem-cell death induced by UVB or by gamma irradiation (PubMed:20634150). Not required for ATM activation, but participates in pathways governed by both ATM and ATR sensor kinases (PubMed:19549833). Involved in DNA damage response (DDR) system that regulates cell cycle arrest (PubMed:24399300). Functional homolog of animal p53 (PubMed:24736489). Regulates SMR5 and SMR7 transcription (PubMed:24399300). Regulates DNA repair and cytokinin signaling separately and plays a key role in controlling lateral root formation under genotoxic stress.

3702:AT4G04880
gene id: 3702:AT4G04880
uniprot id: Q8LPL7
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the hydrolysis of the free cytosolic methylated adenosine nucleotide N(6)-methyl-AMP (N6-mAMP) to produce inositol monophosphate (IMP) and methylamine (PubMed:29884623, PubMed:30721978, PubMed:31318636). Is required for the catabolism of cytosolic N6-mAMP, which is derived from the degradation of mRNA containing N6-methylated adenine (m6A) (PubMed:29884623). Does not possess deaminase activity toward adenosine, AMP, N6-methyladenosine, or N6-mATP in vitro (PubMed:29884623).
messages: Monomer.
messages: Slight reduction of root growth (PubMed:29884623). 10-fold increase of the ratio N(6)-methyl-AMP/AMP in leaf cells (PubMed:29884623).
messages: cytosol

3702:AT1G58470
gene id: 3702:AT1G58470
uniprot id: Q9C652
names: Developmental Stage
names: Function
names: Tissue Specificity
messages: Expressed in joints of immature siliques, decreases with maturation and not detected in the joints of mature siliques.
messages: Highly expressed in inflorescences and roots. Detected in leaves and seedlings, but not in stems. Expressed in vegetative shoot apex and root meristem, but not in root cap. Detected in flower buds, junction of pedicels, joints of immature siliques and pistil.
messages: RNA binding protein. Can also bind in vitro to single-stranded DNA.

3702:AT2G22990
gene id: 3702:AT2G22990
uniprot id: A0A178VQT7
uniprot id: A8MQW0
uniprot id: A8MR78
uniprot id: F4IKK4
uniprot id: Q3EBW0
uniprot id: Q8RUW5
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: 95% inhibition by diisopropyl fluorophosphate (DFP) and 30% by phenylmethylsulfonyl fluoride (PMSF).
messages: Belongs to the peptidase S10 family.
messages: Highly expressed in seedlings. Expressed in leaves, stems, flowers and siliques, and at low levels in roots.
messages: In cv. Pna-10, this protein SCP8 and the adjacent SCP10 are not present due to a natural 13-kb deletion (PubMed:19969522).
messages: Involved in plants secondary metabolism. Functions as acyltransferase to form the sinapate ester sinapoylmalate. Also capable of catalyzing the formation of 1,2-bis-O-sinapoyl beta-D-glucoside.
messages: May be due to a competing donor splice site.
messages: N-glycosylated.
messages: Plants do not contain sinapoylmalate and accumulate its biosynthetic precursor, sinapoylglucose.
messages: Vacuole
messages: Was classified as a serine carboxypeptidase-like (SCPL) protein solely on the basis of the overall sequence similarity (PubMed:15908604) but it has been shown that it belongs to a class of enzymes that catalyze acyltransferase reactions (PubMed:17600138).

3702:AT5G62430
gene id: 3702:AT5G62430
uniprot id: Q8W1E3
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Circadian-regulation at the protein level, but not at the mRNA level. Strongly decreased expression during the dark phase. Accumulates at high levels at the beginning of the day.
messages: Expressed in the vascular tissues of cotyledons, leaves and hypocotyls and in stomata. Not detected in roots.
messages: Interacts with ADO2 (via kelch repeats), ADO3 (via kelch repeats) and GI (via N-terminus).
messages: Nucleus
messages: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. A flanking TGT sequence contributes to the specificity of binding. Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression. The DNA-binding ability is not modulated by 'GIGANTEA' but the stability of CDF1 is controlled by the proteasome-dependent pathway. Ubiquitinated by the SCF(ADO3) E3 ubiquitin ligase complex. Binds to the FT promoter in the morning.
messages: Ubiquitinated.

3702:AT1G60815
gene id: 3702:AT1G60815
uniprot id: A0A654EJR8
uniprot id: A8MRD4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant rapid alkalinization factor (RALF) family.
messages: Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
messages: Secreted

3702:AT4G11920
gene id: 3702:AT4G11920
uniprot id: Q8VZS9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Required for meristem organization and maintenance of quiescent center identity and stem cells.
messages: Associates with the APC/C complex. Interacts with CDC20-1, CDC20-2, CYCA1-1, CYCA1-2, CYCA3-4, CYCB1-1 and CYCB1-2. Binds to GIG1.
messages: Belongs to the WD repeat CDC20/Fizzy family.
messages: Expressed from late M until late S-early G2 phases.
messages: Expressed in the root tip, predominantly in the root cap, quiescent center cells, surrounding stem cells and columella.
messages: FZR1 and FZR2 are functional homologs, and their functional divergence in root development arises from the different expression patterns.
messages: FZR2 controls the induction of early rounds of endoreduplication while the remaining rounds may be mediated by FZR1 and FZR3.
messages: Nucleus
messages: Stunted plants. Impaired root growth and smaller root meristem.

3702:AT1G51380
gene id: 3702:AT1G51380
uniprot id: Q9C8J1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity).
messages: Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily.
messages: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
messages: nucleolus

3702:AT1G19850
gene id: 3702:AT1G19850
uniprot id: A0A178W993
uniprot id: A0A1P8AQ60
uniprot id: P93024
names: Developmental Stage
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Absence of the protein probably causes early embryonic lethality. Premature stop codons are associated with vascular defects.
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional activator. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Mediates embryo axis formation and vascular tissues differentiation. Functionally redundant with ARF7. May be necessary to counteract AMP1 activity.
messages: Belongs to the ARF family.
messages: Expressed in the whole plant with a lower expression in leaves. Detected in embryo axis, provascular tissues, procambium and some differentiated vascular regions of mature organs.
messages: Homodimers and heterodimers.
messages: Homodimers and heterodimers. Interacts with BRX and the auxin-responsive proteins IAA1, IAA12 (BODENLOS), IAA17 and ARF7.
messages: In early embryo and during organ development.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT1G48175
gene id: 3702:AT1G48175
uniprot id: A0A384LH40
uniprot id: Q6IDB6
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytidine and deoxycytidylate deaminase family. ADAT2 subfamily.
messages: Cytoplasm
messages: Embryonic lethality due to embryo development arrest at the globular stage.
messages: Interacts with TAD3.
messages: Involved in RNA editing. Catalyzes the specific deamination of adenosine-34 in several cytosolic tRNA species. Generates inosine at the wobble position of the anticodon loop.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G66240
gene id: 3702:AT5G66240
uniprot id: A0A178UPK2
uniprot id: F4JZ57
uniprot id: Q8RXD8
uniprot id: Q9FH64
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat SWD2 family.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G36180
gene id: 3702:AT4G36180
uniprot id: C0LGS2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G78980
gene id: 3702:AT1G78980
uniprot id: Q6R2K1
names: Disruption Phenotype
names: Domain
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cannot functionally replace STRUBBELIG.
messages: Expressed in leaves and flowers.
messages: Membrane
messages: No visible phenotype.
messages: Over-expression of SRF5 led to male-sterility in cv. Columbia but not in cv. Landsberg.
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT3G26932
gene id: 3702:AT3G26932
uniprot id: Q9LJF5
names: Disruption Phenotype
names: Function
messages: Binds double-stranded RNA.
messages: No visible phenotype.

3702:AT1G76850
gene id: 3702:AT1G76850
uniprot id: Q8S3U9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SEC5 family.
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall. Probable component of an exocyst subcomplex specifically involved in autophagy-related, Golgi-independent membrane traffic to the vacuole. Regulates autophagosome formation and autophagy-related Golgi-independent import into the vacuole.
messages: No visible phenotype under normal growth conditions, but the double mutant sec5a-1 and sec5b-1 is male gametophytic lethal due to defect in pollen germination and pollen tube growth.
messages: The exocyst complex is composed of SEC3, SEC5, SEC6, SEC8, SEC10, EXO70A1 and EXO84B. Interacts with SEC3A and EXO70B1. Binds to EXO70H1 and EXO70B2 (PubMed:21199889).
messages: cytosol
messages: extracellular exosome

3702:AT4G21000
gene id: 3702:AT4G21000
uniprot id: Q9SUB4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the alpha-class carbonic anhydrase family.
messages: N-glycosylated.
messages: Reversible hydration of carbon dioxide.
messages: chloroplast stroma

3702:AT2G41930
gene id: 3702:AT2G41930
uniprot id: A0A178VRT4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G18950
gene id: 3702:AT2G18950
uniprot id: A0A178VWH1
uniprot id: A0A1P8B2S8
uniprot id: Q8VWJ1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family.
messages: Involved in the synthesis of tocopherol (vitamin E). Catalyzes the condensation of homogentisate and phytyl diphosphate to form dimethylphytylhydrquinone. Low activity with geranylgeranyl diphosphate as substrate, but no activity with farnesyl diphosphate or solanesyl diphosphate. Tocopherol functions to limit lipid oxidation during seed desiccation, quiescence and germination and early seedling development. Protects thylakoid membrane lipids from photooxidation and is required for low-temperature adaptation.
messages: Reduced seed longevity, severe seedling growth defects during germination and high levels of lipid hydroperoxides and hydroxy fatty acids.
messages: Seeds and plants overexpressing HPT1 accumulate increased levels of tocopherol.
messages: chloroplast membrane

3702:AT3G14180
gene id: 3702:AT3G14180
uniprot id: Q9LJG8
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: Transcription regulator that may repress the maturation program during early embryogenesis.

3702:AT3G24170
gene id: 3702:AT3G24170
uniprot id: A0A178V4R8
uniprot id: P48641
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Cytoplasm
messages: Maintains high levels of reduced glutathione in the cytosol.
messages: Maintains high levels of reduced glutathione.
messages: The active site is a redox-active disulfide bond.

3702:AT3G47720
gene id: 3702:AT3G47720
uniprot id: Q9STU1
names: Caution
names: Function
names: Subcellular Location Annotation
messages: Lacks the conserved catalytic triad His-Tyr-Glu of the active site.
messages: Nucleus
messages: Probable inactive ADP-ribosyltransferase that may be involved in stress and developmental responses.

3702:AT1G78900
gene id: 3702:AT1G78900
uniprot id: A0A384LM33
uniprot id: O23654
uniprot id: Q0WLF6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: Catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e). Binds to the deubiquitinating enzyme AMSH3.
messages: Vacuole membrane

3702:AT5G06740
gene id: 3702:AT5G06740
uniprot id: A0A178UPB5
uniprot id: A0A1P8BAS9
uniprot id: Q9FG33
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Membrane

3702:AT5G54500
gene id: 3702:AT5G54500
uniprot id: A0A178UHL8
uniprot id: F4K0D0
uniprot id: Q9LSQ5
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WrbA family.
messages: Binds 1 FMN per monomer.
messages: Catalyzes the transfer of electrons from NADH and NADPH to several quinones in vitro. May act as detoxification enzyme, and protect against auxin-induced oxidative stress.
messages: Cell membrane
messages: No visible phenotype under normal growth conditions, but mutant plants have increased resistance to the necrotrophic fungus Botrytis cinerea.

3702:AT4G32910
gene id: 3702:AT4G32910
uniprot id: A0A178V2H2
uniprot id: Q8RXH2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the nucleoporin Nup85 family.
messages: Component of the nuclear pore complex (NPC).
messages: Functions as a component of the nuclear pore complex (NPC).
messages: Functions as component of the nuclear pore complex (NPC).
messages: Nucleus envelope
messages: Part of the nuclear pore complex (NPC). The NPC has an eight-fold symmetrical structure comprising a central transport channel and two rings, the cytoplasmic and nuclear rings, to which eight filaments are attached. The cytoplasmic filaments have loose ends, while the nuclear filaments are joined in a distal ring, forming a nuclear basket. NPCs are highly dynamic in configuration and composition, and can be devided in 3 subcomplexes, the NUP62 subcomplex, the NUP107-160 subcomplex and the NUP93 subcomplex, containing approximately 30 different nucleoporin proteins.
messages: nuclear pore complex

3702:AT5G15600
gene id: 3702:AT5G15600
uniprot id: A0A178U7W0
uniprot id: Q9LF22
names: Function
names: Similarity
names: Tissue Specificity
messages: Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth.
messages: Belongs to the SPIRAL1 family.
messages: Ubiquitous.

3702:AT2G25360
gene id: 3702:AT2G25360
uniprot id: Q9SKL2
names: Function
names: Similarity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

3702:AT4G05130
gene id: 3702:AT4G05130
uniprot id: A0A654FLP3
uniprot id: Q9M0Y2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the SLC29A/ENT transporter (TC 2.A.57) family.
messages: By nitrogen deficiency and 5-fluorouracil plus methotrexate.
messages: Cell membrane
messages: Expressed in leaves and at lowe levels in stems and flowers.
messages: Membrane
messages: Nucleoside transporter that can mediate uptake of adenosine, uridine, guanosine or cytidine when expressed in a heterologous system (yeast).

3702:AT3G14850
gene id: 3702:AT3G14850
uniprot id: A0A178VJP5
uniprot id: F4IWA8
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
messages: Membrane

3702:AT3G26400
gene id: 3702:AT3G26400
uniprot id: Q9LIN5
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-4 subunit B family.
messages: Homodimer (By similarity). Nonspherical monomer. mRNA-discriminating component of initiation complexes (PubMed:19493973).
messages: Nucleus
messages: Phosphorylated.
messages: Promotes the eIF4F and eIF4A RNA-dependent ATP-hydrolysis activity with different efficiency depending on mRNAs, thus providing mRNA discrimination during initiation of translation.

3702:AT3G24320
gene id: 3702:AT3G24320
uniprot id: Q84LK0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DNA mismatch repair MutS family.
messages: DNA mismatch repair protein specifically involved in maintenance of mitochondrial genome configuration by controlling specific rearranged portion. Functions by suppressing asymmetric recombination at some repeat pairs.
messages: Mitochondrion
messages: Variegated plants and appearance of specific new restriction fragments in the mitochondrial genome.
messages: chloroplast

3702:AT1G07540
gene id: 3702:AT1G07540
uniprot id: Q6R0E3
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Binds specifically to the plant telomeric double-stranded DNA sequences. At least 6 repeats of telomeric sequences are required for binding.
messages: Expressed ubiquitously.
messages: Homodimer.
messages: No visible phenotype, probably due to redundancy.
messages: Nucleus

3702:AT3G27831
gene id: 3702:AT3G27831
uniprot id: A0A654FBC5
uniprot id: Q2V3S0
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT4G34030
gene id: 3702:AT4G34030
uniprot id: A0A178UTZ4
uniprot id: Q9LDD8
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the AccD/PCCB family.
messages: Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3-methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism.
messages: In roots, cotyledons, leaves, flowers, ovaries, siliques and embryos.
messages: Mitochondrion matrix
messages: Probably a heterodimer composed of biotin-containing alpha subunits and beta subunits.
messages: Temporal and spatial accumulation of the alpha and beta subunits during development at approximately equal molar ratios.

3702:AT5G20190
gene id: 3702:AT5G20190
uniprot id: A0A178UT17
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G06040
gene id: 3702:AT1G06040
uniprot id: Q96288
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as negative regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation (PubMed:17605755, PubMed:18540109, PubMed:21685177). BBX24/STO and BBX25/STH function as transcriptional corepressors of HY5 activity, leading to the down-regulation of BBX22 expression. BBX24/STO acts additively with BBX25/STH during de-etiolation and the hypocotyl shade avoidance response (PubMed:23624715). Functions as negative regulator of photomorphogenic UV-B responses by interacting with both COP1 and HY5 (PubMed:22410790). May act as a transcription factor in the salt-stress response (PubMed:12909688).
messages: BBX24/STO expression is not changed in plants treated with increasing salt concentrations.
messages: COP1-mediated ubiquitination and subsequent proteasomal degradation of BBX24/STO occurs in the dark.
messages: Circadian regulation with a peak before dawn.
messages: High expression in leaves and lower in roots and flowers.
messages: Interacts with COP1 WD40 domain (PubMed:11226162, PubMed:21685177, PubMed:22410790). Interacts with HY5 (PubMed:22410790, PubMed:23733077) and HYH (PubMed:23733077). Interacts with RCD1 and TRP4 (PubMed:11018516, PubMed:12909688).
messages: No visible phenotype under normal growth conditions, but mutant seedlings show reduction of hypocotyls length when grown under continuous blue light and a short primary root phenotype under UV-B radiation.
messages: Nucleus

3702:AT2G29170
gene id: 3702:AT2G29170
uniprot id: Q9ZW04
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. SDR65C subfamily.

3702:AT4G33350
gene id: 3702:AT4G33350
uniprot id: Q9SZB2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Tic22 family.
messages: Involved in protein precursor import into chloroplasts. Imported into the intermembrane space via the Toc translocon. May be involved in the import pathway used by proteins without a cleavable N-terminal pre-sequence (By similarity).
messages: Part of the Tic complex (By similarity). Interacts with OEP61 during its transport into the intermembrane space.
messages: chloroplast intermembrane space

3702:AT4G26790
gene id: 3702:AT4G26790
uniprot id: A0A7G2F3Z0
uniprot id: Q8VY93
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT4G19840
gene id: 3702:AT4G19840
uniprot id: O81865
names: Tissue Specificity
messages: Vascular tissues, specifically in phloem companion cell-sieve element complexes.

3702:AT5G13740
gene id: 3702:AT5G13740
uniprot id: A0A1P8BEY5
uniprot id: A0A654G0R7
uniprot id: Q8RWN2
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily.
messages: Major facilitator superfamily (MFS) transporter involved in zinc tolerance by participating in vacuolar sequestration of zinc.
messages: Membrane
messages: Overexpression of ZIF1 confers increased zinc tolerance and causes interveinal leaf chlorosis.
messages: Strongly expressed in developing leaves, differentiating zones of root tips and sepals of developing flowers. Restricted to vascular tissues in older leaves, mature roots, flowers, anthers and filaments. Not expressed in developing anthers.
messages: Up-regulated by zinc and manganese. Not induced by cadmium, copper or iron. Down-regulated upon nematode infection.
messages: Vacuole membrane
messages: Zinc sensitivity resulting in increased chlorosis and decreased shoot fresh weight and root length. Accumulation of high levels of zinc in shoots.

3702:AT5G51160
gene id: 3702:AT5G51160
uniprot id: Q9LU58
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G62110
gene id: 3702:AT1G62110
uniprot id: Q8GY68
names: Similarity
messages: Belongs to the mTERF family.

3702:AT2G30920
gene id: 3702:AT2G30920
uniprot id: A0A654EZ36
uniprot id: O49354
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
messages: Component of a multi-subunit COQ enzyme complex.
messages: Mitochondrion inner membrane
messages: O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.

3702:AT4G06634
gene id: 3702:AT4G06634
uniprot id: Q2V3L3
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Deregulated expression of glutaredoxins GRX480, GRXS13 and thioredoxin TRX-h5 leading to enhanced susceptibility to fungal infection (e.g. B.cinerea) (PubMed:24451981). Increased sensitivity to abscisic acid (ABA), drought, and salt (NaCl) stress. Reduced induction of ABR1, but reduced repression of RD29A, RD29B, and COR15A in response to abiotic stresses (PubMed:26961720).
messages: Dual-function transcription factor with both repression and activation activities. Binds to 5'-CCATATT-3' motif in target gene promoters (e.g. ABR1) (PubMed:26961720). Binds also to G-rich DNA motif 5'-GGGGGCAGTGG-3' (PubMed:22508367). Regulates the expression of genes involved in diverse cellular pathways, including glucose metabolism, photosynthesis, phototropism and stress response (e.g. salt, drought and osmotic stress) (PubMed:22508367, PubMed:26961720). Regulates plant immunity, especially during necrotrophic fungal infection (e.g. B.cinerea) (PubMed:24451981). Binds to ABR1 promoter and promotes its expression, thus negatively regulating the abscisic acid (ABA) signaling pathway. Represses ABA- and salt-responsive genes expression (PubMed:26961720).
messages: Induced by abscisic acid (ABA) in an ABI1- and ABI4-dependent manner. Stimulated by stress conditions including high salt, osmotic stress (e.g. mannitol) and dehydration. May be induced by ABI4 but repressed by ABR1. Repressed by darkness but induced by light.
messages: Interacts with MED18 to suppress disease susceptibility via the repression of genes glutaredoxins GRX480, GRXS13 and thioredoxin TRX-h5.
messages: Mostly expressed in flowers, to a lower extent in seedlings, stems and leaves, and, at low levels, in roots and senescent leaves.
messages: Nucleus
messages: Rapidly induced following seed germination, especially in tender cotyledons.

3702:AT3G54890
gene id: 3702:AT3G54890
uniprot id: A0A178VBT7
uniprot id: A8MS75
uniprot id: F4JE43
uniprot id: F4JE46
uniprot id: Q01667
names: Cofactor
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: Induced by low light (LL) but repressed by high light (HL). Inhibited by cold.
messages: Light emission at 684 nm upon excitation at 410 and 470 nm.
messages: Photoregulated by reversible phosphorylation of its threonine residues.
messages: The LHC complex consists of chlorophyll a-b binding proteins. Red-emitting heterodimer with LHCA4 (PubMed:21083539). Interacts with LHCA5 (PubMed:21806943, PubMed:15563470).
messages: The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3702:AT1G17610
gene id: 3702:AT1G17610
uniprot id: F4I902
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Confers resistance to low temperatures by limiting chloroplast damage and cell death, thus maintaining growth homeostasis (PubMed:16667557, PubMed:23617639, PubMed:23651299). Regulates steryl-esters and sterols accumulation (PubMed:16667557). Limits leaf necrosis associated with virulent bacterial infection (e.g. Pseudomonas syringae pv. tomato DC3000) (PubMed:23617639).
messages: Cytoplasm
messages: Mostly expressed in leaves and flowers (mainly in sepals), and, at a lower intensity, in stems (PubMed:23617639, PubMed:23651299). Present at low levels in roots and seeds (PubMed:23617639).
messages: Nucleus
messages: RNAi lines display chilling sensitivity. Massive necrotic response to virulent Pseudomonas syringae pv. tomato infection, but normal bacterial proliferation.
messages: Stabilized by low temperatures (at protein level).
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.

3702:AT1G24230
gene id: 3702:AT1G24230
uniprot id: B2GVM8
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G57390
gene id: 3702:AT3G57390
uniprot id: A0A178VAT6
uniprot id: A0A1I9LQD5
uniprot id: Q9M2K8
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Altered expression of MIKC* MADS-controlled genes during pollen maturation. Early flowering under short-days conditions (SD) when combined with AGL15 disruption.
messages: During the reproductive phase, accumulates in immature buds and at the base of the floral organs, and in the receptacle, ovules, anther filaments, and stigma and style of open flowers. Later observed in sporogenous tissue of anthers. During male gametogenesis, expressed in the microspores before they separate from each other. Later present at high levels within pollen grains up to stage 13 of flower development, when anthers dehisce. During carpel development, first detected in developing ovules. After fertilization, confined to globular structures or nodules of proliferating free nuclear endosperm required for embryo development. Disappears from the endosperm at to the heart stage of embryo development, when very little nuclear endosperm remains. Never detected in developing embryos at any stage. In young seedlings, present everywhere except in a portion of the hypocotyl and in newly emerging leaves.
messages: Mostly expressed in pollen, roots, flowers and siliques, and to a lower extent, in stems and leaves. Expressed in the endosperm and in developing male and female gametophytes. Also present in seedlings.
messages: Nucleus
messages: Probable transcription factor involved in the negative regulation of flowering, probably through the photoperiodic pathway. Prevents premature flowering. Downstream regulator of a subset of the MIKC* MADS-controlled genes required during pollen maturation.

3702:AT1G58055
gene id: 3702:AT1G58055
uniprot id: Q2V4G3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT3G02310
gene id: 3702:AT3G02310
uniprot id: A0A1I9LM64
uniprot id: A0A384L9U7
uniprot id: P29384
uniprot id: Q5XXL4
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Expressed early during flower development.
messages: Heterodimer with AGAMOUS capable of binding to CArG-box sequences (PubMed:9418042). Interacts with TT16/AGL32 (PubMed:16080001).
messages: Nucleus
messages: Probable transcription factor. Functions with SEPALLATA1/AGL2 and SEPALLATA3/AGL9 to ensure proper development of petals, stamens and carpels and to prevent the indeterminate growth of the flower meristem. Forms a heterodimer via the K-box domain with AG, that could be involved in genes regulation during floral meristem development.
messages: Triple mutations in the SEP1, SEP2 and SEP3 genes result in the replacement of the stamens and petals by sepals and of the carpels by a new mutant flower with sepaloid organs.

3702:AT3G29255
gene id: 3702:AT3G29255
uniprot id: Q9LS68
names: Caution
names: Similarity
messages: Belongs to the terpene cyclase/mutase family.
messages: Could be the product of a pseudogene.

3702:AT1G28560
gene id: 3702:AT1G28560
uniprot id: A0A1P8ARE1
uniprot id: A0A654EIT8
uniprot id: Q8L627
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SNAPC3/SRD2 family.
messages: Expressed in seedlings, apical meristems, developing leaves, roots, stipules and flowers.
messages: In young seedlings, accumulates in shoot and root apical meristems (SAM and RAM, respectively), leaf primordia, and root stele tissues. In roots, high levels throughout young root primordia that later decrease at the arrest of cell division, and finally increase again when the apical meristem become activated. In young developing leaves, present in guard cells, vascular tissues, trichomes, and trichome support cells to be later expressed uniformly in the lamina. Gradually restricted to the leaf margin and fades out in fully expanded leaves. In roots, detected in apices, stele tissues, and lateral root primordia. In flowers, first observed over the floral bud, and later restricted to vascular tissues in developing floral organs, except for the pistil, where the expression is ubiquitous. In mature flowers, disappears progressively from the pistil, but accumulates in mature pollen and the filaments. Also present in pedicels. In pollinated pistils, highly expressed in ovaries that contain developing embryos. Present throughout embryogenesis, particularly in the lower half of the embryo at the heart-shaped stage and in the radicle RAM region at the cotyledonary stage.
messages: Lethal.
messages: Nucleus
messages: Part of the SNAPc complex.
messages: Transcription activator of small-nuclear RNA genes (snRNA), which have essential roles in pre-mRNA splicing and rRNA processing. Essential protein involved in the establishment of apical meristems and organ primordia, embryogenesis, cell differentiation and cell proliferation, probably by modulating the establishment of auxin gradients. Participates in the control of competence in cell proliferation; required for the reinitiation of the progression of the cell cycle and subsequent cell proliferation during cell redifferentiation leading to callus formation, especially during the first day of dedifferentiation (e.g. callus, root and shoot formation from root and hypocotyl explants).
messages: Transiently induced by auxin (2,4-D), with a synergistic action of auxin and cytokinin on transcript levels.

3702:AT2G18230
gene id: 3702:AT2G18230
uniprot id: A0A178VY12
uniprot id: P21216
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPase family.
messages: Cytoplasm

3702:AT1G73540
gene id: 3702:AT1G73540
uniprot id: Q8VY81
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Nudix hydrolase family.
messages: Expressed in roots, leaves, stems and inflorescences.
messages: No visible phenotype under normal growth conditions.
messages: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.
messages: chloroplast

3702:AT1G65310
gene id: 3702:AT1G65310
uniprot id: A0A1P8AQT8
uniprot id: A2RVL7
uniprot id: O80803
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Cell membrane
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Interacts with XTH31. The formation of an XTH17-XTH31 dimer may be required for XET activity.
messages: Knockdown mutants have shorter roots, decreased cell wall xyloglucan content and increased aluminum resistance.
messages: Root specific (PubMed:11673616). Expressed in all cell types in the elongating and differentiating region of the root (PubMed:15659443).
messages: Up-regulated by auxin and brassinolide (PubMed:11673616). Down-regulated by aluminum.
messages: apoplast
messages: cell wall

3702:AT3G53780
gene id: 3702:AT3G53780
uniprot id: A0A1I9LM07
uniprot id: A0A654FFK7
uniprot id: F4JBM4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane
messages: Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis.

3702:AT1G75890
gene id: 3702:AT1G75890
uniprot id: A0A178WNY9
uniprot id: A0A1P8ASQ1
uniprot id: Q94CH7
names: Caution
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: Sequencing errors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G25090
gene id: 3702:AT5G25090
uniprot id: Q8LC95
names: Subcellular Location Annotation
messages: Cell membrane

3702:AT5G02470
gene id: 3702:AT5G02470
uniprot id: A0A178ULD9
uniprot id: Q9FNY3
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Cytoplasm
messages: Expressed in a cell cycle-dependent manner. Low expression at the G1/S transition and increases during the S phase. S/G2 transitions.
messages: Heterodimer with E2F. Interacts preferentially with E2FA and E2FB, but also with E2FC.
messages: Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization.
messages: Involved in the regulation of the G1/S transition. Increases the DNA binding and the transactivation activities of E2F proteins after heterodimerization. The complex DPA/E2FA promotes cell division and acts as a regulator of the endocycle. Positively regulates the activity of S phase-specific genes.
messages: Nucleus
messages: Strongly expressed in the actively dividing tissues of the shoot apical meristem, young leaf primordia, the vascular tissues of the maturing leaf primordia and axillary buds.
messages: The DIM domain (143-214) is necessary but not sufficient for heterodimerization.
messages: Up-regulated by the transcription factor ERF114.

3702:AT3G01280
gene id: 3702:AT3G01280
uniprot id: A0A178VE16
uniprot id: Q9SRH5
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.
messages: By the bacterial pathogen P.syringae pv. tomato.
messages: Consists mainly of membrane-spanning sided beta-sheets.
messages: Expressed in shoot meristems, root meristematic zone, lateral roots, leaves, stigma and anthers.
messages: Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective (By similarity). Involved in plant development at reproductive stage, is important for pollen development and may regulate hydrogen peroxide generation during disease resistance.
messages: In vdac1-6 homozygous plants, normal growth, but small siliques and decreased pollen germination rate and tube length.
messages: Mitochondrion outer membrane

3702:AT3G02630
gene id: 3702:AT3G02630
uniprot id: A0A178VB94
uniprot id: Q9M879
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the fatty acid desaturase type 2 family.
messages: Binds 2 Fe(2+) ions per subunit.
messages: Binds 2 iron ions per subunit.
messages: Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons 9 and 10 of the acyl chain.
messages: Homodimer.
messages: Positively regulated by LEC1.
messages: Ubiquitously expressed with a preference in leaves, flowers and stems.
messages: chloroplast stroma

3702:AT3G48700
gene id: 3702:AT3G48700
uniprot id: A0A5S9XJ04
uniprot id: Q9SMM9
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the 'GDXG' lipolytic enzyme family.
messages: Carboxylesterase acting on esters with varying acyl chain length.
messages: Expressed in flowers.

3702:AT2G34357
gene id: 3702:AT2G34357
uniprot id: A0A654F061
uniprot id: F4IHU8
names: Similarity
messages: Belongs to the RRP12 family.

3702:AT3G21490
gene id: 3702:AT3G21490
uniprot id: A0A178VLY3
uniprot id: A0JPW5
names: Function
names: Similarity
messages: Belongs to the HIPP family.
messages: Heavy-metal-binding protein.

3702:AT5G65495
gene id: 3702:AT5G65495
uniprot id: Q8GWU7
names: Subunit
messages: Interacts with SPK1B/ASK2.

3702:AT3G51190
gene id: 3702:AT3G51190
uniprot id: A0A178VL50
uniprot id: Q4PSL7
names: Similarity
messages: Belongs to the universal ribosomal protein uL2 family.

3702:AT1G79950
gene id: 3702:AT1G79950
uniprot id: A0A1P8AQ29
uniprot id: A0A654ES14
uniprot id: F4HQE2
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: ATP-dependent DNA helicase implicated in DNA replication, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates (PubMed:25516598, PubMed:25595823). Also plays a role in preserving the stability of 45S rDNA repeats (PubMed:27760121).
messages: Belongs to the helicase family. RAD3/XPD subfamily.
messages: Increased homologous recombination and replication defects (PubMed:25516598, PubMed:25595823). Growth inhibition due to defective cell proliferation. Hypersensitivity to DNA cross-link agents (PubMed:25595823). Loss of 45S rDNA repeats (PubMed:27760121).
messages: Nucleus
messages: The PIP-box (PCNA interacting peptide) motif mediates the interaction with PCNA and localization to replication foci.

3702:AT5G42470
gene id: 3702:AT5G42470
uniprot id: A0A654G7A9
uniprot id: Q5XF81
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BABAM2 family.
messages: Cytoplasm
messages: Nucleus

3702:AT4G11690
gene id: 3702:AT4G11690
uniprot id: Q9T0D6
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT5G62480
gene id: 3702:AT5G62480
uniprot id: A0A1P8B9C1
uniprot id: Q9FUT0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT3G45600
gene id: 3702:AT3G45600
uniprot id: Q9M1E7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tetraspanin (TM4SF) family.
messages: Cell membrane
messages: May be involved in the regulation of cell differentiation.

3702:AT5G41680
gene id: 3702:AT5G41680
uniprot id: Q3E8J4
names: Domain
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: The protein kinase domain is predicted to be catalytically inactive. Lacks the conserved Asp active site at position 208, which is replaced by an Asn residue.

3702:AT3G53650
gene id: 3702:AT3G53650
uniprot id: A0A178VGH6
uniprot id: Q9LFF6
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK6ac, H2BK33ac and H2BK34ac.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated by BRE1 to form H2BK143ub1 and deubiquitinated by UBP26. Required for heterochromatic histone H3 di- and trimethylation at H3K4me. May give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK6ac = acetylated Lys-8; H2BK33ac = acetylated Lys-29; H2BK34ac = acetylated Lys-30; H2BK143ub1 = monoubiquitinated Lys-134.

3702:AT4G05050
gene id: 3702:AT4G05050
uniprot id: P0CH33
uniprot id: Q3E7T8
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family.
messages: Cytoplasm
messages: For the sake of clarity sequence features are annotated only for the first chain, and are not repeated for each of the following chains.
messages: Nucleus
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT1G77380
gene id: 3702:AT1G77380
uniprot id: Q39134
names: Activity Regulation
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Amino acid-proton symporter. Stereospecific transporter with a broad specificity for GABA, tryptophan and both neutral and basic amino acids. High affinity transport of cationic amino acids.
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.2) subfamily.
messages: Cell membrane
messages: Endomembrane system
messages: Expressed in the root phloem. Detected in stamens, in cotyledons, and in major veins of mature leaves.
messages: Induced in the connective tissue of stamens shortly before dehiscence.
messages: Inhibited by carbonylcyanide m-chlorophenylhydrazone and 2,4-dinitrophenol.
messages: No visible phenotype.
messages: Nucleus membrane

3702:AT5G38250
gene id: 3702:AT5G38250
uniprot id: F4KA51
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Membrane

3702:AT3G45080
gene id: 3702:AT3G45080
uniprot id: Q9M1V1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sulfotransferase 1 family.
messages: Cytoplasm
messages: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor.

3702:AT1G29940
gene id: 3702:AT1G29940
uniprot id: A0A178W5B4
uniprot id: F4I366
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: Component of the RNA polymerase I (Pol I) complex consisting of at least 13 subunits.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest core component of RNA polymerase I which synthesizes ribosomal RNA precursors. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol I is composed of mobile elements and NRPA2 is part of the core element with the central large cleft and probably a clamp element that moves to open and close the cleft.
messages: Defect in seed production due to female gametophyte developmental arrest.
messages: Essential for the completion of the three rounds of mitosis in female megaspores required for the development of mature gametophytes.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G38320
gene id: 3702:AT2G38320
uniprot id: A0A1P8B059
uniprot id: A0A654EZX9
uniprot id: O80919
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PC-esterase family. TBL subfamily.
messages: Contains 2 motifs that are conserved in esterases, but it is unlikely that this protein belongs to the catalytically active pectin esterases.
messages: Golgi apparatus membrane
messages: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).

3702:AT3G24100
gene id: 3702:AT3G24100
uniprot id: Q94K36
names: Similarity
messages: Belongs to the SERF family.

3702:AT4G03540
gene id: 3702:AT4G03540
uniprot id: A0A178V2N5
uniprot id: Q9ZT81
names: Caution
names: Developmental Stage
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the Casparian strip membrane proteins (CASP) family.
messages: Cell membrane
messages: Expressed in the root maturation zone and, transiently, in emerged lateral roots.
messages: Expressed in the stele of the root.
messages: Homodimer and heterodimers.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G66840
gene id: 3702:AT1G66840
uniprot id: A0A178WIG7
uniprot id: Q9C9N6
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the WEB family.
messages: Cytoplasm
messages: Deficient chloroplast response.
messages: Interacts with WEB1.
messages: Required for the chloroplast avoidance response under high intensity blue light. This avoidance response consists in the relocation of chloroplasts on the anticlinal side of exposed cells. Acts in association with WEB1 to maintain the velocity of chloroplast photorelocation movement via cp-actin filaments regulation.
messages: Ubiquitous but preferentially in chloroplast-containing tissues.

3702:AT3G28340
gene id: 3702:AT3G28340
uniprot id: Q9LHD2
uniprot id: W8QNM3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 8 family.
messages: By methylviologen (MV), a superoxide radical generating drug.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.

3702:AT5G67010
gene id: 3702:AT5G67010
uniprot id: Q9FGC9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT2G41040
gene id: 3702:AT2G41040
uniprot id: Q0WPT7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily.
messages: plastoglobule

3702:AT4G30850
gene id: 3702:AT4G30850
uniprot id: Q84N34
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the ADIPOR family.
messages: By abscisic acid (ABA) and the cytokinin benzyladenine (BA).
messages: Highly expressed in roots and at lower levels in stems and flowers.
messages: May play a role in abiotic stress response.
messages: Membrane

3702:AT3G10720
gene id: 3702:AT3G10720
uniprot id: Q94CB1
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in siliques.
messages: Expressed throughout silique development.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT2G43020
gene id: 3702:AT2G43020
uniprot id: Q9SKX5
names: Cofactor
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the flavin monoamine oxidase family.
messages: Binds 1 FAD per subunit.
messages: By abscisic acid, jasmonate, salicylic acid, wounding and flagellin 22, a pathogen elicitor.
messages: Flavoenzyme involved in polyamine back-conversion (PubMed:20532512, PubMed:21081665). Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine, spermidine and their acetyl derivatives (PubMed:20532512, PubMed:21081665). Substrate preference is N(1)-acetylspermine > spermine > spermidine (PubMed:21081665). Plays an important role in the regulation of polyamine intracellular concentration (Probable). Involved in abscisic acid-mediated developmental processes (PubMed:26310141). May contribute to nitric oxide-mediated effects on root growth (PubMed:26310141).
messages: Highly expressed in flowers and siliques. Also found in leaf and stem and in low levels in cotyledons, roots and in seedlings.
messages: Peroxisome

3702:AT5G09330
gene id: 3702:AT5G09330
uniprot id: Q9FY82
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in the epidermal cells of the root apical region.
messages: Interacts with NAC030/VND7.
messages: Nucleus
messages: The NAC domain includes a DNA binding domain and a dimerization domain.
messages: Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes.

3702:AT1G64210
gene id: 3702:AT1G64210
uniprot id: Q9SH71
names: Domain
names: Subcellular Location Annotation
messages: Cell membrane
messages: The protein kinase domain is predicted to be catalytically inactive.

3702:AT2G43870
gene id: 3702:AT2G43870
uniprot id: A0A178VV55
uniprot id: O22817
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT3G06590
gene id: 3702:AT3G06590
uniprot id: A0A5S9X9T6
uniprot id: Q9C8Z9
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer (Probable). Interacts with PRE3. Binds to RSA1 (PubMed:24009530).
messages: Hypersensitivity to salt (NaCl) stress during seed germination and during seedling growth and development. Hypersensitivity to hydrogen peroxide H(2)O(2) and methyl viologen (MV).
messages: Nucleus
messages: Slightly induced by salt (NaCl) stress.
messages: bHLH transcription factor that binds DNA on specific sequence 5'-CANNTG-3' in target gene promoters (PubMed:24009530). Negatively regulates brassinosteroid signaling (PubMed:20023194). Together with BHLH148/RITF1, regulates the transcription of several genes involved in the detoxification of reactive oxygen species (ROS) generated by salt (NaCl) stress. Confers tolerance to salt and to the oxidative stress-inducing reagents hydrogen peroxide H(2)O(2) and methyl viologen (MV) (PubMed:24009530).

3702:AT1G01610
gene id: 3702:AT1G01610
uniprot id: Q9LMM0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the GPAT/DAPAT family.
messages: Esterifies acyl-group from acyl-ACP to the sn-2 position of glycerol-3-phosphate, a step in cutin biosynthesis.
messages: Membrane
messages: The HXXXXD motif is essential for acyltransferase activity and may constitute the binding site for the phosphate moiety of the glycerol-3-phosphate.
messages: Widely expressed at high level. Highly expressed in seedlings, developing seedlings and flower buds.

3702:AT4G09030
gene id: 3702:AT4G09030
uniprot id: A0A5S9XQN2
uniprot id: Q9M0S4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the classical AGP family.
messages: Cell membrane
messages: Membrane
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Predominantly expressed in flowers and at a lower level in roots and siliques.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT1G09390
gene id: 3702:AT1G09390
uniprot id: A0A654E859
uniprot id: O80522
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT2G32540
gene id: 3702:AT2G32540
uniprot id: O80891
uniprot id: W8Q3D1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like B subfamily.
messages: Golgi apparatus membrane
messages: Membrane
messages: Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

3702:AT5G46873
gene id: 3702:AT5G46873
uniprot id: Q2V311
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT5G61900
gene id: 3702:AT5G61900
uniprot id: Q941L3
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Based on mass spectrometry analysis, the N-peptide must be modified and there might be additional modifications other than myristoylation.
messages: Belongs to the copine family.
messages: Cell membrane
messages: Down-regulated by high temperature. Up-regulated by pathogen, calcium, low humidity, avirulence gene product avrRpt2 and salicylic acid.
messages: Dwarf, twisted leaves and enhanced disease resistance in cv. Columbia when grown at 22 degrees Celsius. No visible phenotype when grown at 28 degrees Celsius, or in cv. Landsberg erecta, cv. No-0, and cv. Wassilewskija at any temperature. Humidity and temperature sensitive lesion mimic phenotype, accelerated hypersensitive response (HR) and increased disease resistance. Bon1 and bon2 double mutants, as well as bon1 and bon3 double mutants are seedling-lethal when grown at 22 degrees Celsius. bon1, bon2 and bon3 triple mutant is seedling-lethal at any temperature.
messages: Expressed in roots and flowers and, at higher levels, in leaves and stems. Strongly expressed in growing tissues. Not detected in green siliques.
messages: Interacts (via VWA domain) with BAP1 and BAP2 (PubMed:17631528). Interacts with HSP70-1 and HSP70-2 (PubMed:26408532).
messages: Negative regulator of cell death and defense responses. Negative regulator of several R genes, including SNC1. May have effects in promoting growth and development. May function in membrane trafficking and in fusion of vesicles with plasma membrane at low temperature. Exhibits calcium-dependent phospholipid binding properties.
messages: Overexpression of BON1 has no effects on pathogen resistance.
messages: The N-terminus (1-116) is sufficient for plasma membrane localization. VWA domain fragments interfere with the function of the full-length protein, triggering a lesion-mimic phenotype.

3702:AT4G02890
gene id: 3702:AT4G02890
uniprot id: P0CH33
uniprot id: Q3E7T8
uniprot id: Q8H159
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family.
messages: Cytoplasm
messages: For the sake of clarity sequence features are annotated only for the first chain, and are not repeated for each of the following chains.
messages: Nucleus
messages: Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: Ubiquitin is encoded by 16 different genes. Ubiquitin is generally synthesized as a polyubiquitin precursor with tandem head to tail repeats. Often, there is one to three additional amino acids after the last repeat, removed in the mature protein. Alternatively, ubiquitin extension protein is synthesized as a single copy of ubiquitin fused to a ribosomal protein (either L40 or S27A) or to a ubiquitin-related protein (either RUB1 or RUB2). Following translation, extension protein is cleaved from ubiquitin.

3702:AT3G23380
gene id: 3702:AT3G23380
uniprot id: F4J424
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Cell membrane
messages: Expressed in flowers and pollen.
messages: Functions as downstream effector of Rho-related GTP binding proteins of the 'Rho of Plants' (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Is involved in pollen tube growth regulation through its interaction with ARAC11/ROP1.
messages: Interacts with ARAC11/ROP1.
messages: Over-expression of RIC5 in tobacco germinating pollen reduces pollen tube expansion elongation.

3702:AT1G75630
gene id: 3702:AT1G75630
uniprot id: A0A178W8D6
uniprot id: F4HZ57
uniprot id: P59229
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase proteolipid subunit family.
messages: Membrane
messages: Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e). The proteolipid components c and c'' are present as a hexameric ring that forms the proton-conducting pore. Interacts with APD2 (PubMed:22897245).
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.
messages: Vacuole membrane

3702:AT4G11290
gene id: 3702:AT4G11290
uniprot id: A0A5S9XRI4
uniprot id: Q56XN0
uniprot id: Q9SUT2
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.
messages: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
messages: Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.
messages: Binds 2 calcium ions per subunit.
messages: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
messages: Secreted
messages: Slightly expressed in roots.
messages: There are 73 peroxidase genes in A.thaliana.
messages: Vacuole

3702:AT3G52250
gene id: 3702:AT3G52250
uniprot id: A0A384KKD5
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G46871
gene id: 3702:AT5G46871
uniprot id: Q4VP04
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Lacks 1 of the 4 disulfide bonds, which are conserved features of the family.
messages: Secreted

3702:AT1G64190
gene id: 3702:AT1G64190
uniprot id: Q9SH69
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 6-phosphogluconate dehydrogenase family.
messages: Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
messages: Forms homodimer (PubMed:27366940). Forms heterodimers with PGD2 or PGD3 (PubMed:27366940).
messages: chloroplast
messages: cytosol

3702:AT1G78310
gene id: 3702:AT1G78310
uniprot id: Q9M9F0
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salt stress.
messages: Functions as a negative regulator of salt stress response. Functions as repressor of WRKY8 transcription factor by decreasing the DNA-binding activity of WRKY8 and acts antagonistically with WRKY8 to regulate sodium and potassium homeostasis under salt stress.
messages: Highly expressed in roots and at lower levels in rosette leaves, cauline leaves, stems, flowers and siliques.
messages: Interacts (via N-terminus) with WRKY8.
messages: No visible phenotype under normal growth conditions, but mutant plants show enhanced resistance to salt stress.
messages: Nucleus

3702:AT4G12300
gene id: 3702:AT4G12300
uniprot id: A0A178V1P1
uniprot id: Q9STI1
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT3G03760
gene id: 3702:AT3G03760
uniprot id: A0A178VCE0
uniprot id: Q9SRV3
names: Similarity
names: Tissue Specificity
messages: Belongs to the LOB domain-containing protein family.
messages: Expressed in roots and flowers.

3702:AT1G75310
gene id: 3702:AT1G75310
uniprot id: Q9FWS1
names: Miscellaneous
messages: May be due to a competing acceptor splice site.

3702:AT3G48060
gene id: 3702:AT3G48060
uniprot id: A0A1I9LTA1
uniprot id: Q9SU69
names: Subcellular Location Annotation
messages: Nucleus

3702:AT1G06450
gene id: 3702:AT1G06450
uniprot id: Q9SHJ0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CAF1 family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity).

3702:AT2G04240
gene id: 3702:AT2G04240
uniprot id: Q9SI09
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Contains lower amounts of endogenous abscisic acid and is more resistant to abscisic acid treatment during seedling establishment.
messages: Function on abscisic acid homeostasis at post-translational level, probably through ubiquitin/proteasome-dependent substrate-specific degradation.
messages: Interacts with UBC8 and TULP9.
messages: Membrane
messages: Ubiquitous. Higher expression in actively growing tissues.
messages: Up-regulated by salt and osmotic stress. Not regulated by abscisic acid treatment. Up-regulated by the DELLA proteins RGL2, RGA and GAI.

3702:AT1G12540
gene id: 3702:AT1G12540
uniprot id: Q9LN95
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: By salicylic acid (SA).
messages: Expressed in roots, leaves, stems, and flowers.
messages: Homodimer.
messages: Nucleus

3702:AT4G28490
gene id: 3702:AT4G28490
uniprot id: P47735
names: Cofactor
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Autophosphorylated on Ser, Thr and Tyr residues.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Expressed in roots and rosettes. Expressed at the base of petioles and pedicels, and in the abscission zones of the floral organs.
messages: Have significantly greater activity in the presence of Mn(2+) than Mg(2+).
messages: Interacts with CST (PubMed:21628627). Binds to IDA (PubMed:27058169).
messages: No visible phenotype; due to the redundancy with HSL2. Hae and hsl2 double mutants have a strong abscission defect.
messages: Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates that controls floral organ abscission. May interact with the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) ligands family.
messages: The name HAESA derives from a Latin word meaning 'to adhere to'.

3702:AT5G48540
gene id: 3702:AT5G48540
uniprot id: Q9LV60
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT1G66160
gene id: 3702:AT1G66160
uniprot id: Q9C8D1
names: Function
messages: Functions as an E3 ubiquitin ligase.

3702:AT1G55890
gene id: 3702:AT1G55890
uniprot id: Q9LG23
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion

3702:AT5G13760
gene id: 3702:AT5G13760
uniprot id: A0A654G0T4
uniprot id: F4K425
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CTL (choline transporter-like) family.
messages: Cell membrane
messages: Choline transporter.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3702:AT5G44500
gene id: 3702:AT5G44500
uniprot id: A0A178UT49
uniprot id: Q9FI15
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP SmB/SmN family.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G72880
gene id: 3702:AT1G72880
uniprot id: A0A178WAH4
uniprot id: Q84MD7
names: Caution
names: Similarity
messages: Belongs to the SurE nucleotidase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G50280
gene id: 3702:AT5G50280
uniprot id: Q9FGR7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: chloroplast

3702:AT5G03320
gene id: 3702:AT5G03320
uniprot id: Q9LZF8
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane
messages: Functions redundantly with PCRK1 in basal resistance against bacterial pathogens and in regulation of plant immunity. Functions together with PCRK1 downstream of the pathogen-associated molecular pattern (PAMP) receptor FLS2. Contributes to the induction of SARD1 and CBP60G, which are transcriptional activator of ICS1, an enzyme involved in salicylate (SA) biosynthesis upon pathogen attack.
messages: Induced by infection with the bacterial pathogen Pseudomonas syringae pv maculicola strain ES4326.
messages: Interacts with FLS2.

3702:AT4G25420
gene id: 3702:AT4G25420
uniprot id: A0A1P8B5N0
uniprot id: A0A654FSN4
uniprot id: Q39110
uniprot id: U3N1S3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family. GA20OX subfamily.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Circadian-regulation. Up-regulated by auxin, paclobutrazol and cold treatment. Negatively controlled by the level of physiologically active gibberellin.
messages: Highly expressed in stems and inflorescence tissues. Detected in seeds, roots, leaves and siliques.
messages: Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 to GA9, via a three-step oxidation at C-20 of the GA skeleton. GA53 is less effectively oxidized than GA12 and is only oxidized one step to GA44 (PubMed:7630935). Involved in the promotion of the floral transition, fertility and silique elongation, but plays only a minor role in elongation of seedling organs. Acts redundantly with GA20OX2 (PubMed:18069939).
messages: Semi-dwarf.

3702:AT3G58130
gene id: 3702:AT3G58130
uniprot id: A0A7G2EV11
uniprot id: Q6DBN0
names: Function
names: Similarity
messages: Belongs to the PIGL family.
messages: Involved in the second step of GPI biosynthesis. De-N-acetylation of N-acetylglucosaminyl-phosphatidylinositol.

3702:AT1G05800
gene id: 3702:AT1G05800
uniprot id: Q9MA46
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: Expressed in leaves and seedlings. Not detected in flowers, siliques or roots.
messages: Induced by wounding (PubMed:18267087, PubMed:20348210, PubMed:24430866). Induced by methyl jasmonate (PubMed:24430866).
messages: No visible phenotype under standard growth phenotype.
messages: Overexpression of DGL causes a dwarf phenotype.
messages: Sn-1-specific phospholipase that releases free fatty acids from phosphatidylcholine. Has a higher galactolipase activity than phospholipase A1 activity when digalactosyldiacylglycerol (DGDG) is used as substrate. Catalyzes the initial step of jasmonic acid biosynthesis. Required for the biosynthesis of basal-level endogenous jasmonate in vegetative tissues. Regulates leaves growth. Not essential for jasmonate biosynthesis after wounding or upon pathogen infection.
messages: chloroplast

3702:AT2G17250
gene id: 3702:AT2G17250
uniprot id: F4IMH3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the CBF/MAK21 family.
messages: Component of the ribosomal small subunit (SSU) processome composed of at least 40 protein subunits and snoRNA U3.
messages: Essential protein required during embryogenesis (PubMed:15266054, PubMed:23382868). Involved in nucleolar processing of ribosomal RNA (rRNA) 40S and 90S ribosomal subunits and ribosome assembly; early in ribosome biogenesis, especially required during the maturation of 5.8S rRNA (PubMed:23382868). Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm (By similarity).
messages: Mostly expressed in flowers and stems and at lower levels in roots, hypocotyls, siliques, leaves and seeds.
messages: Nucleus membrane
messages: Pale seeds with arrested embryo development at the globular stage in homozygous plants (PubMed:15266054, PubMed:23382868). In heterozygous plants, slight accumulation of the 23S-like precursor P-A3 (PubMed:23382868). Altered maturation of 5.8S rRNA with an especially impaired processing at the 5' end (PubMed:23382868).
messages: nucleolus

3702:AT1G02410
gene id: 3702:AT1G02410
uniprot id: A0A178WLX7
uniprot id: Q8GWR0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COX11/CtaG (TC 3.D.4.8) family.
messages: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.
messages: Mitochondrion inner membrane

3702:AT5G01730
gene id: 3702:AT5G01730
uniprot id: A0A178UA95
uniprot id: A0A1P8BBE5
uniprot id: A0A1P8BBE6
uniprot id: A0A1P8BBE8
uniprot id: A0A1P8BBE9
uniprot id: A0A1P8BBH5
uniprot id: A0A384KVX1
uniprot id: A0A654FXX5
uniprot id: Q5XPJ6
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activates the Arp2/3 complex and binds actin through the C-terminal VCA (verprolin homology/cofilin homology/acidic) domain consisting of a WH2 domain followed by an Arp2/3-binding acidic motif (A), separated by a conserved linker region (C). Binds BRK1 through the N-terminal Scar homology domain (SHD).
messages: Belongs to the SCAR/WAVE family.
messages: Expressed in expanding cotyledons, expanding leaves and expanding siliques containing developing embryos. Detected in unopened flower buds and in the expanding tip region of roots. Reduced expression in mature leaves.
messages: Interacts with SPK1.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.
messages: Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex. Regulates trichome branch positioning and expansion.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytoskeleton

3702:AT1G09530
gene id: 3702:AT1G09530
uniprot id: A0A5S9TG51
uniprot id: O80536
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: By UV treatment.
messages: Dephosphorylated by TOPP4 during photomorphogenesis, leading to subsequent degradation of PIF3 by the proteasomal pathway.
messages: Homodimer (Probable). Can form a heterodimer with REP1 and PIF4. Phytochrome B binds specifically to DNA-bound PIF3, but only upon red light induced conversion to the Pfr form (PfrB). Reconversion to Pr form causes rapid dissociation. Interacts with APRR1/TOC1. Binds to PIA2; this interaction may trigger the repression of PHYA-mediated phosphorylation (PubMed:27143545). Interacts with TOPP4 (PubMed:26704640, PubMed:11828023, PubMed:12826627, PubMed:12897250, PubMed:27143545) (Probable). Interacts with FYPP1 and FYPP3 (PubMed:31527236). Interacts with HDA15 in the dark (PubMed:23548744).
messages: Inhibited submergence-induced and ethylene-dependent underwater hypocotyl elongation.
messages: Nucleus
messages: Phosphorylated by PHYA; this phosphorylation is repressed by PIA2.
messages: Transcription factor acting in the phytochrome signaling pathway (PubMed:10466729, PubMed:14508006). Activates transcription by binding to the G box (5'-CACGTG-3') (PubMed:10797009). Acts as a negative regulator of phytochrome B signaling (PubMed:14508006). Represses chlorophyll biosynthesis and photosynthesis in the dark (PubMed:23548744). Recruits the histone deacetylase HDA15 to the promoters of chlorophyll biosynthetic and photosynthetic genes (PubMed:23548744). HDA15 represses their transcription by histone deacetylation (PubMed:23548744). Promotes the expression of MDP60 to modulate hypocotyl cell elongation in response to light and ethylene signaling (PubMed:29167353). Required for submergence-induced and ethylene-dependent underwater hypocotyl elongation (PubMed:31638649).

3702:AT3G16370
gene id: 3702:AT3G16370
uniprot id: A0A178V9X5
uniprot id: Q9LU14
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G01650
gene id: 3702:AT4G01650
uniprot id: A0A1P8B4E3
uniprot id: Q84VW2
uniprot id: Q9M120
names: Function
names: Similarity
names: Subunit
messages: Belongs to the COQ10 family.
messages: Interacts with coenzyme Q.
messages: Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.

3702:AT3G02930
gene id: 3702:AT3G02930
uniprot id: Q9M8T5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WEB family.
messages: chloroplast

3702:AT3G06810
gene id: 3702:AT3G06810
uniprot id: A0A654FFE9
uniprot id: Q8RWZ3
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acyl-CoA dehydrogenase family.
messages: By infection with the bacterial pathogen P.syringae pv. tomato strain DC3000.
messages: Defective in root hair expansion (PubMed:20562230). Mutant plants are resistant to the inhibitory effect of intermediate levels of indole-3-butyric acid (IBA) and 2,4-DB on root elongation (PubMed:17277896, PubMed:18725356).
messages: Involved with IBR1 and IBR10 in the peroxisomal beta-oxidation of indole-3-butyric acid (IBA) to form indole-3-acetic acid (IAA), a biologically active auxin (PubMed:20562230). May be responsible for catalyzing the first step in IBA-CoA beta-oxidation (PubMed:17277896). May play a role in defense response to pathogenic bacteria (PubMed:23906045).
messages: Peroxisome
messages: Plants over-expressing IBR3 exhibit enhanced susceptibility to the bacterial pathogen P.syringae pv. tomato strain DC3000.

3702:AT2G47630
gene id: 3702:AT2G47630
uniprot id: A0A384KIJ6
uniprot id: A0A384L7I0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G22910
gene id: 3702:AT3G22910
uniprot id: A0A654FB31
uniprot id: Q9LIK7
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calmodulin.
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIB subfamily.
messages: Catalyzes the hydrolysis of ATP coupled with the transport of calcium.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The N-terminus contains an autoinhibitory calmodulin-binding domain, which binds calmodulin in a calcium-dependent fashion.
messages: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

3702:AT5G55560
gene id: 3702:AT5G55560
uniprot id: Q6ICW6
names: Caution
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.
messages: May regulate flowering time by modulating the photoperiod pathway.
messages: Was named WNK/'with no lysine(K)' because key residues for catalysis, including the lysine involved in ATP binding, are either not conserved or differ compared to the residues described in other kinase family proteins.

3702:AT3G46690
gene id: 3702:AT3G46690
uniprot id: Q9STE3
names: Similarity
messages: Belongs to the UDP-glycosyltransferase family.

3702:AT1G68460
gene id: 3702:AT1G68460
uniprot id: A0A178W6I2
uniprot id: Q94ID3
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the IPP transferase family.
messages: Down-regulated by cytokinins.
messages: Expressed in the vascular stele of the roots, in the xylem precursor cell files in the root tip, in leaf axils, ovules, and immature seeds.
messages: Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP, ADP and AMP. Adenine, adenosine, isopentenylpyrophosphate and 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBDP) are not used as substrates.
messages: No visible phenotype, due the redundancy with other IPTs.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast

3702:AT2G32900
gene id: 3702:AT2G32900
uniprot id: O48626
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulation of the precursors of the two major storage proteins albumin 2S and globulin 12S in dry seeds.
messages: Belongs to the ZW10 family.
messages: Cytoplasm
messages: Endoplasmic reticulum membrane
messages: Interacts (via the central region) with MAG2 (PubMed:23025793). Forms a complex with MAG2, MIP2 and MIP3 on the endoplasmic reticulum (PubMed:24118572).
messages: May be required for accurate chromosome segregation. Required for proper maturation of seed storage proteins. Forms a complex with MAG2, MIP2 and MIP3 on the endoplasmic reticulum that may be responsible for efficient transport of seed storage proteins.
messages: centromere
messages: kinetochore
messages: spindle

3702:AT3G22830
gene id: 3702:AT3G22830
uniprot id: A0A178VDE3
uniprot id: Q9LUH8
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HSF family.
messages: Belongs to the HSF family. Class A subfamily.
messages: Cytoplasm
messages: Exhibits temperature-dependent phosphorylation.
messages: Homotrimer.
messages: Nucleus
messages: The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motif is a transcriptional activator element.
messages: Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).

3702:AT5G67460
gene id: 3702:AT5G67460
uniprot id: A0A1P8BCM1
uniprot id: A0A7G2FJM2
uniprot id: Q9FJX7
names: Similarity
messages: Belongs to the glycosyl hydrolase 17 family.

3702:AT1G26500
gene id: 3702:AT1G26500
uniprot id: Q9FZD4
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G15180
gene id: 3702:AT1G15180
uniprot id: A0A654EA48
uniprot id: B3H701
uniprot id: Q94AL1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: Membrane

3702:AT2G41430
gene id: 3702:AT2G41430
uniprot id: Q39096
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Central component of stress responses that interacts with poly(A)-binding proteins. Negative regulator of abscisic acid (ABA) responses, including resistance to drought and freezing as well as stomatal closure regulation. Mediates resistance to the bacterial necrotroph pathogen Erwinia carotovora subsp. carotovora and promotes the induction of marker genes for systemic acquired resistance (SAR).
messages: Contains a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.
messages: Cytoplasm
messages: Expressed in cauline leaves, stems, rosette leaves, immature siliques and primary inflorescences.
messages: Hypersensitive to abscisic acid (ABA) leading to improved tolerance to both drought and freezing, as well as impaired seed germination in the presence of ABA.
messages: Interacts with PAB2, PAB4 and PAB8. Interacts with MPC.
messages: Strongly induced by abiotic stresses such as abscisic acid (ABA), salicylic acid (SA), wounding, high light, cold stress, oxidative stress, hypergravity and dehydration. Accumulates upon root colonization by the plant-growth-promoting rhizobacterium (PGPR) Paenibacillus polymyxa. Slightly reduced levels in response to UV-A illumination, salt stress and heat shock treatment.

3702:AT4G00350
gene id: 3702:AT4G00350
uniprot id: F4JH46
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
messages: May be due to a competing donor splice site.
messages: Membrane

3702:AT1G28640
gene id: 3702:AT1G28640
uniprot id: A0A5S9WC49
uniprot id: P0C8Z7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Secreted

3702:AT3G12480
gene id: 3702:AT3G12480
uniprot id: A0A384KK08
uniprot id: Q9LHG0
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G14260
gene id: 3702:AT3G14260
uniprot id: A0A178VCK0
uniprot id: Q9LUM1
names: Caution
names: Function
names: Similarity
messages: Belongs to the LOR family.
messages: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G08340
gene id: 3702:AT5G08340
uniprot id: Q8VZR0
names: Function
names: Subcellular Location Annotation
messages: Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme.
messages: chloroplast

3702:AT3G26740
gene id: 3702:AT3G26740
uniprot id: Q96500
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Component of high molecular weight thylakoid LFNRs-containing protein complexes containing LIR1, LFNR1, LFNR2, TIC62 and TROL proteins. Interacts directly with LFNR1 and LFNR2; LIR1 increases the affinity of LFNR1 and LFNR2 for TIC62 and subsequent thylakoid relocalization.
messages: Expression is controlled by light and by a circadian clock. Differentially regulated at the level of mRNA stability at different times of day, being a target of the degradation pathway mediated by the downstream (DST) instability determinant and thus following a circadian clock rhythm with highest levels in early afternoon (PubMed:16055688). Rapidly degraded upon illumination; this degradation coincides with the release of the LFNR from the thylakoid membrane (PubMed:26941088). Repressed by calmodulin (CaM) antagonists such as trifluoperazine (TFP) and N-(6-aminohexyl)-5-chloro-1-naphthelene-sulfonamid-hydrochloride (W7); this repression is alleviated by lanthanum (e.g. LaCl(3)) (PubMed:16980540).
messages: May form interchain disulfide bonds with LFNR1 and LFNR2.
messages: Slight increase in nonphotochemical quenching (NPQ). Marked decrease in the accumulation of LFNR1 and LFNR2-containing thylakoid protein complexes.
messages: Thylakoid-determinant subunit of high molecular weight LFNRs-containing protein complexes.
messages: chloroplast envelope
messages: chloroplast stroma
messages: chloroplast thylakoid membrane

3702:AT3G22730
gene id: 3702:AT3G22730
uniprot id: A0A178VNZ0
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G23340
gene id: 3702:AT4G23340
uniprot id: A0A178V7E1
uniprot id: F4JNI3
uniprot id: Q3E9X5
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3702:AT4G33440
gene id: 3702:AT4G33440
uniprot id: A0A178V3I0
uniprot id: Q84K13
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT2G39730
gene id: 3702:AT2G39730
uniprot id: A0A178VUM0
uniprot id: A0A178VW63
uniprot id: A0A5S9X620
uniprot id: F4IVZ7
uniprot id: P10896
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure.
messages: Belongs to the RuBisCO activase family.
messages: Phosphorylated at Thr-78 by CK2.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast stroma
messages: plastoglobule

3702:AT3G58220
gene id: 3702:AT3G58220
uniprot id: A0A178V776
uniprot id: F4J4P8
names: Caution
names: Miscellaneous
messages: May be due to intron retention.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G54370
gene id: 3702:AT1G54370
uniprot id: Q8S396
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
messages: Endosome membrane
messages: Expressed in roots, leaves, stems, flowers and siliques. Detected at low levels in roots and shoots.
messages: Golgi stack membrane
messages: Induced by NaCl in a ABA-independent manner.
messages: Involved in trafficking to the vacuole (PubMed:21278129). Required for cell proliferation and cell expansion, but not for cell differentiation (PubMed:21278129). Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes (PubMed:12047628). May also exchange Li(+) and Cs(+) with a lower affinity (By similarity).
messages: No visible phenotype; due to redundancy with NHX6. Nhx5 and nhx6 double mutant has a slower development, is drastically smaller and is salt sensitive.
messages: trans-Golgi network membrane

3702:AT4G22260
gene id: 3702:AT4G22260
uniprot id: Q56X52
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts early in chloroplast biogenesis as a component of a redox chain responsible for phytoene desaturation. Prevents the generation of toxic oxygen radicals and photooxidation of the nascent photosynthetic apparatus. Involved in the differentiation of multiple plastid types, including chloroplasts, amyloplasts, and etioplasts. Might participate in the chloroplast respiratory chain.
messages: Belongs to the alternative oxidase family.
messages: Binds 2 iron ions per subunit.
messages: Expressed throughout the development of the leaves.
messages: Ubiquitous.
messages: Variegated cotyledons and leaves. The amount of white tissue increases with light intensity.
messages: chloroplast thylakoid membrane
messages: chromoplast membrane

3702:AT3G58790
gene id: 3702:AT3G58790
uniprot id: A0A1I9LQY8
uniprot id: A0A384KHQ7
uniprot id: Q8L4B0
uniprot id: W8QNJ3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 8 family.
messages: Expressed in roots, inflorescences, siliques, leaves and stems.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.
messages: No changes in the cell wall content.

3702:AT5G28960
gene id: 3702:AT5G28960
uniprot id: A0A178UNE4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G05850
gene id: 3702:AT5G05850
uniprot id: Q9FFJ3
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the SHOC2 family.
messages: Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. PIRL1 acts redundantly with PIRL9 in the differentiation of microspores into pollen.
messages: No visible phenotype. Pirl1 and pirl9 double mutant is lethal due to a male-specific transmission failure leading to a severe pollen malformation.
messages: Widely expressed.

3702:AT4G37990
gene id: 3702:AT4G37990
uniprot id: A0A178UVK9
uniprot id: Q02972
names: Cofactor
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.
messages: Binds 2 Zn(2+) ions per subunit.
messages: Expressed in the differentiation and elongation zones of primary and lateral roots. Expressed in the hypocotyl, cotyledon veins, vasculature of the first rosette leaves, hydathodes and trichomes. In stems, expressed in the vascular cambium and developing xylem tissues. Expressed in the style, anthers, stamen filaments, stigmatic regions in flowers, and abscission and style regions of siliques.
messages: Homodimer.
messages: Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

3702:AT3G21520
gene id: 3702:AT3G21520
uniprot id: A0A654F9D7
uniprot id: Q9LVF4
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in tissues undergoing senescence (PubMed:20712629, PubMed:22530652). In roots tips, strongly expressed in the cortex undergoing vacuole biogenesis (PubMed:22530652).
messages: Belongs to the plant DMP1 protein family.
messages: Endoplasmic reticulum membrane
messages: Expressed in leaves, siliques and roots.
messages: Involved in membrane remodeling including fission during breakdown of the endoplasmic reticulum (ER) and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots.
messages: Vacuole membrane

3702:AT1G59312
gene id: 3702:AT1G59312
uniprot id: A0A1P8AUC2
uniprot id: Q93WB3
names: Domain
names: Function
messages: Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
messages: The EXKPK motif is conserved in inositol-pentakisphosphate 2-kinases of both family 1 and 2.

3702:AT3G21620
gene id: 3702:AT3G21620
uniprot id: A0A097NUS0
uniprot id: Q9LVE4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as an osmosensitive calcium-permeable cation channel.
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Membrane

3702:AT2G36500
gene id: 3702:AT2G36500
uniprot id: A0A654FA17
uniprot id: Q9SJQ5
names: Subcellular Location Annotation
messages: Membrane

3702:AT5G57560
gene id: 3702:AT5G57560
uniprot id: A0A178UQX4
uniprot id: Q38857
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Its induction in case of mechanical stress, suggests that it may contribute in the adaptive changes in morphogenesis by being recruited to alter tissues tensil strength, or flexibility, enabling adaptation to mechanically stressful environments.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: Highly expressed. Predominantly expressed in green siliques. Expressed in young expanding leaves, trichomes, lateral root primordia, vascular tissue, abscission zones and elongating hypocols. Following wind stimulation, it decreases in the leaves of wind-stimulated plants, while it strongly increases in sites around cells of the pith parenchyma, between the vascular elements, and within the epidermis.
messages: In response to mechanical perturbations such as wind or touch. Induced by auxin and brassinolide.
messages: N-glycosylated; essential for its enzymatic activity.
messages: apoplast
messages: cell wall

3702:AT1G45616
gene id: 3702:AT1G45616
uniprot id: A0A178W692
uniprot id: Q9C637
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G10180
gene id: 3702:AT1G10180
uniprot id: A0A178WBW5
uniprot id: Q9SY60
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the EXO84 family.
messages: Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall (By similarity).
messages: The exocyst complex is composed of SEC3, SEC5, SEC6, SEC8, SEC10, EXO70A1 and EXO84.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G03050
gene id: 3702:AT1G03050
uniprot id: A0A654E7D5
uniprot id: Q9SA65
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: Vesicle
messages: clathrin-coated pit
messages: clathrin-coated vesicle

3702:AT2G29720
gene id: 3702:AT2G29720
uniprot id: O82384
names: Similarity
messages: Belongs to the 3-hydroxybenzoate 6-hydroxylase family.

3702:AT5G52850
gene id: 3702:AT5G52850
uniprot id: Q9FLX6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: chloroplast

3702:AT2G30575
gene id: 3702:AT2G30575
uniprot id: A0A654EYP5
uniprot id: Q8RXE1
uniprot id: W8PVM7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 8 family.
messages: Expressed in roots, inflorescences, siliques, leaves and stems.
messages: Golgi apparatus membrane
messages: May be involved in pectin and/or xylans biosynthesis in cell walls.
messages: No changes in the cell wall content.

3702:AT4G18920
gene id: 3702:AT4G18920
uniprot id: A0A178V434
uniprot id: Q1PE68
names: Similarity
messages: Belongs to the OBAP family.

3702:AT4G33650
gene id: 3702:AT4G33650
uniprot id: A0A178UUQ6
uniprot id: A0A178UWS8
uniprot id: F4JJ15
uniprot id: Q8S944
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
messages: Homooligomer. Interacts with ARC5 on peroxisomes and ELM1 on mitochondria.
messages: Involved in the control of mitochondrial and peroxisomal division and morphology. In association with PEX11C, PEX11D, PEX11E and FIS1B, is involved in cell cycle-associated constitutive self-replication of preexisting peroxisomes.
messages: May be due to an intron retention.
messages: Mitochondrion
messages: Peroxisome
messages: Reduced plant growth. Increase in the size of peroxisomes and decrease in the number of peroxisomes per cell. Elongated mitochondria.
messages: Ubiquitous. Preferentially expressed in flowers.

3702:AT4G17760
gene id: 3702:AT4G17760
uniprot id: A0A178UYJ0
uniprot id: Q709F4
uniprot id: Q8L7G8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the rad1 family.
messages: Nucleus

3702:AT5G36740
gene id: 3702:AT5G36740
uniprot id: A0A384KZK2
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G30860
gene id: 3702:AT2G30860
uniprot id: A0A178VP05
uniprot id: O80852
names: Activity Regulation
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Phi family.
messages: By zinc in roots and benoxacor.
messages: In vitro, possesses glutathione S-transferase activity toward 1-chloro-2,4-dinitrobenzene (CDNB) and benzyl isothiocyanate (BITC), and glutathione peroxidase activity toward cumene hydroperoxide and linoleic acid-13-hydroperoxide. May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: Oxidated at Met-35, Met-118, Met-123 and Met-184 in oxidative stress conditions (e.g. hydrogen peroxide H(2)O(2)).
messages: Redox-regulated enzyme; in oxidative stress conditions methionine oxidation ensure a thermodynamic and structural compensatory mechanism to guarantee H(2)O(2) peroxidase activity despite transferase activity inhibition.
messages: cytosol

3702:AT3G58500
gene id: 3702:AT3G58500
uniprot id: A0A178VCH8
uniprot id: P48578
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPP phosphatase family.
messages: Belongs to the PPP phosphatase family. PP-2A subfamily.
messages: Binds 2 manganese ions per subunit.
messages: Cytoplasm
messages: Functions redundantly with PP2A3, and is involved in establishing auxin gradients, apical-basal axis of polarity and root and shoot apical meristem during embryogenesis. May dephosphorylate PIN1 and regulate its subcellular distribution for polar auxin transport (PubMed:23167545). The holoenzyme composed of PP2AA1, PP2A4 and B'ZETA or B'ETA acts as negative regulator of plant innate immunity by controlling BAK1 phosphorylation state and activation in surface-localized immune receptor complexes (PubMed:25085430).
messages: PP2A consists of a common heterodimeric core enzyme, composed of a 36 kDa catalytic subunit (subunit C) and a 65 kDa constant regulatory subunit (subunit A), that associates with a variety of regulatory subunits such as subunits B (the R2/B/PR55/B55, R3/B''/PR72/PR130/PR59 and R5/B'/B56 families) (By similarity). Interacts with SIC/RON3 (PubMed:26888284).
messages: Phosphorylation of either threonine (by autophosphorylation-activated protein kinase) or tyrosine results in inactivation of the phosphatase. Auto-dephosphorylation has been suggested as a mechanism for reactivation.
messages: Reversibly methyl esterified on Leu-313 by leucine carboxyl methyltransferase 1 (LCMT1) and pectin methylesterase 1 (PME1). Carboxyl methylation influences the affinity of the catalytic subunit for the different regulatory subunits, thereby modulating the PP2A holoenzyme's substrate specificity, enzyme activity and cellular localization.

3702:AT3G56200
gene id: 3702:AT3G56200
uniprot id: Q9LYM2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.6) subfamily.
messages: Membrane

3702:AT4G39850
gene id: 3702:AT4G39850
uniprot id: Q94FB9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCD family. Peroxisomal fatty acyl CoA transporter (TC 3.A.1.203) subfamily.
messages: Contributes to the transport of fatty acids and their derivatives (acyl CoAs) across the peroxisomal membrane. Provides acetate to the glyoxylate cycle in developing seedlings. Involved in pollen tube elongation, ovule fertilization, and seeds germination after imbibition (controls the switch between the opposing developmental programs of dormancy and germination), probably by promoting beta-oxidation of storage lipids during gluconeogenesis. Required for biosynthesis of jasmonic acid and conversion of indole butyric acid to indole acetic acid. Confers sensitivity to monofluoroacetic acid (FAc), a toxic acetate analog, and to 2,4-dichlorophenoxybutyric acid (2,4-DB) and indole-3-butyric acid (IBA), two precursors of auxin after beta-oxidation.
messages: Glyoxysome membrane
messages: Impaired germination after imbibition, rescued by sucrose treatment. Resistance to FAc, IBA and 2,4-DB. Compromised ability to convert acetate into soluble carbohydrate. Defective in lipid mobilization and accumulate acyl CoAs. Poor initiation of lateral root formation and smaller rosettes with fewer leaves than in wild-type. Crinkled and waxy leaves.
messages: Levels increase transiently after germination, before and during radicle emergence, especially in darkness (at protein level).
messages: Peroxisome membrane

3702:AT3G48540
gene id: 3702:AT3G48540
uniprot id: A0A384KB52
uniprot id: Q1PEH3
names: Similarity
messages: Belongs to the cytidine and deoxycytidylate deaminase family.

3702:AT3G55970
gene id: 3702:AT3G55970
uniprot id: A0A178V764
uniprot id: A0A1I9LLN9
uniprot id: Q9LY48
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: 2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway (PubMed:28760569, PubMed:28559313). Converts JA to 12-hydroxyjasmonate (12OH-JA), an inactive form of JA (PubMed:28760569, PubMed:28559313). Is specific to free JA, and cannot oxidize the bioactive form jasmonoyl-L-isoleucine (JA-Ile) or other JA-amino acid conjugates (PubMed:28760569). Prevents over-accumulation of JA and indirectly its bioactive form JA-Ile under stress response (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense signaling, by contributing to 12OH-JA accumulation, which represses JA defense responses upon infection by the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Acts as negative regulator of JA-mediated defense responses upon infestation by the herbivorous caterpillar Mamestra brassicae (PubMed:28559313).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Induced by methyl jasmonate (MeJA) (PubMed:20565618, PubMed:28559313). Induced by infection with the bacterial pathogen Pseudomonas syringae pv. maculicola (PubMed:20565618, PubMed:15098125). Induced by wounding (PubMed:17544464, PubMed:28760569). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28760569, PubMed:28559313). Induced by infestation with the caterpillar Mamestra brassicae (PubMed:28559313).
messages: The quadruple mutant jox1, jox2, jox3 and jox4 exhibit reduced root and shoot growth, delayed flowering, reduced seed production, constitutively elevated jasmonate and jasmonoyl-L-isoleucine levels, and enhanced resistance to the necrotrophic fungal pathogen Botrytis cinerea and the herbivorous caterpillar Mamestra brassicae.

3702:AT1G55910
gene id: 3702:AT1G55910
uniprot id: Q94EG9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ZIP transporter (TC 2.A.5) family.
messages: Cell membrane
messages: Probably mediates zinc uptake from the rhizosphere.

3702:AT5G11350
gene id: 3702:AT5G11350
uniprot id: A0A384LQ49
uniprot id: Q8VYU4
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.
messages: Belongs to the CCR4/nocturin family.
messages: Component of the CCR4-NOT complex, at least composed of CRR4 and CAF1 proteins.
messages: Cytoplasm
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G14685
gene id: 3702:AT1G14685
uniprot id: A0A178W364
uniprot id: Q9LDE2
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the BBR/BPC family.
messages: Expressed in seedlings, leaves and pistils. Detected in the base of flowers and tips of carpels, in sepal and petal vasculature, in pollen grains, in young rosette, in the lateral and tip of primary roots, and in ovule at the exception of the outer integument.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.

3702:AT5G22630
gene id: 3702:AT5G22630
uniprot id: A0A178UL55
uniprot id: Q9FNJ8
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine.
messages: Expressed in roots, leaves, stems, flowers and siliques. More abundant in stems and roots.
messages: Has no detectable prehenate dehydratase activity.
messages: Strongly up-regulated during stem elongation.
messages: chloroplast stroma

3702:AT3G48870
gene id: 3702:AT3G48870
uniprot id: A0A5S9XJ62
uniprot id: F4JF64
uniprot id: Q9SXJ7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ClpA/ClpB family.
messages: Belongs to the ClpA/ClpB family. ClpC subfamily.
messages: By senescence. Not induced by heat stress.
messages: Expressed at low levels in roots and inflorescences (PubMed:15659100). Expressed at very low levels in rosette leaves (PubMed:15659100). Expressed in photosynthetic green tissues with high levels in young, developing leaf tissues (PubMed:23898032).
messages: Homodimer and homohexamer (PubMed:21737456). Hexamerization upon addition of ATP (PubMed:21737456). Interacts with CLPT1 (PubMed:25149061). Interacts with CLPS1 (PubMed:23898032). Stably associated with the import machinery (PubMed:21737456). Interacts with CLPF (PubMed:26419670).
messages: Molecular chaperone (PubMed:15304652, PubMed:21737456, PubMed:24599948). May act as a suppressor of FtsH-mediated thylakoid membrane biogenesis and may enhance photoinhibition (PubMed:15304652). Seems not involved in chloroplastic protein import (PubMed:15304652). Probable component of the TIC-associated stromal import motor involved in inner membrane translocation (PubMed:17376159). Has an ATPase activity, but no ADPase activity (PubMed:21737456). Interacts with transit peptides with a positional preference (PubMed:21737456, PubMed:22545953). Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place (PubMed:22545953).
messages: No visible phenotype (PubMed:17376159). Clpc1 and clpc2 double mutants are embryo lethal when homozygous (PubMed:17376159).
messages: chloroplast membrane
messages: chloroplast stroma

3702:AT5G02200
gene id: 3702:AT5G02200
uniprot id: A8MR65
names: Disruption Phenotype
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Activated by FHY3/FAR1 under far-red light (FR); HY5 prevents this activation (PubMed:21097709, PubMed:18033885, PubMed:16045472). Down-regulated by FR, red (R) and blue (B) lights (PubMed:18033885, PubMed:16045472).
messages: Belongs to the FHY1 protein family.
messages: Can activate transcription (By similarity). Essential for light-regulated PHYA nuclear accumulation and subsequent PHYA phototropic signaling processes (PubMed:21969386, PubMed:22374392, PubMed:17566111). PHYA-specific signal transducer in response to continuous FR lights. Mediates the association of PHYA with HFR1 and LAF1 in the nucleus in response to FR conditions (PubMed:19482971, PubMed:16045472). Contributes to inhibition of hypocotyl elongation in continuous blue light (B) (PubMed:16045472).
messages: Cytoplasm
messages: Homodimer and heterodimer with FHY1 (PubMed:16045472). Interacts with PHYA, especially upon far-red (FR) light illumination (PubMed:21969386, PubMed:21884939, PubMed:19482971, PubMed:19208901). Binds to LAF1 and HFR1 (PubMed:19482971).
messages: Inactivated by rapid reversible PHYA-mediated phosphorylation.
messages: Nucleus
messages: Partially blind to far-red (FR). Impaired inhibition of hypocotyl elongation and cotyledons expansion under continuous FR light conditions (PubMed:19482971, PubMed:16045472). In plants lacking FHY1 and FHL, altered phototropism (e.g. phototropic bending) associated with abnormal consitutive cytosolic localization of PHYA (PubMed:22374392, PubMed:17566111). In the double mutant fhl fhy1 several PHYA-dependent phototropic responses are altered (e.g. hypocotyl elongation and cotyledon opening under high-irradiance conditions and seed germination under very-low-fluence conditions), but not for some PHYA-dependent responses such as the abrogation of negative gravitropism in blue light and red-enhanced phototropism (PubMed:17566111). Hyposensitivity to blue light (B) (PubMed:16045472).

3702:AT1G07880
gene id: 3702:AT1G07880
uniprot id: A0A178WHV9
uniprot id: A0A654EIG6
uniprot id: Q9LQQ9
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activated by threonine and tyrosine phosphorylation (By similarity). Activated by the MAP kinase kinase MKK6 in vitro.
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Dually phosphorylated on Thr-191 and Tyr-193, which activates the enzyme.
messages: Expressed in roots, stems and flower buds.
messages: Interacts with MKK6.
messages: MKK6-MPK13 module positively regulates lateral root formation.
messages: May be due to an intron retention.
messages: RNAi MPK13 displays fewer lateral roots.
messages: The TXY motif contains the threonine and tyrosine residues whose phosphorylation activates the MAP kinases.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G09550
gene id: 3702:AT3G09550
uniprot id: A0A1I9LLR6
uniprot id: A0A384KPI6
uniprot id: F4J181
names: Subcellular Location Annotation
messages: Membrane

3702:AT2G43100
gene id: 3702:AT2G43100
uniprot id: Q9ZW84
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LeuD family.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (Probable). Functions redundantly with LEUD2 in the methionine chain elongation pathway of aliphatic glucosinolate formation.
messages: Expressed in vascular bundles of roots, cotyledons and rosette leaves (PubMed:24608865). Expressed in stem vascular bundles which branche off into lateral inflorescences (PubMed:24608865). Expressed in connective tissues in anthers (PubMed:24608865). In young seedlings, expressed in cotyledon epidermal cells and vasculare bundles (PubMed:32612621). In hypocotyls, expressed in parenchyma cells surrounding the vasculature and further peripheral cells (PubMed:32612621). In seedling roots, expressed in cells along the vasculature (PubMed:32612621). In roots of adult plants, expressed in cells closely associated with the stele (PubMed:32612621). In flowering stalks, expressed in parenchyma cells associated with the phloem or the xylem (PubMed:32612621). Expressed in the vasculature of sepals and petals (PubMed:32612621).
messages: Heterodimer of the large LEUC/IIL1 subunit and the small LEUD (SSU1, SSU2 or SSU3) subunits.
messages: No visible phenotype under normal growth conditions.
messages: Plastid
messages: chloroplast stroma

3702:AT5G64720
gene id: 3702:AT5G64720
uniprot id: Q9FGG1
names: Developmental Stage
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant egg cell-secreted peptide family.
messages: Confined to the egg cell before fertilization, but disappears upon gamete fusion. Also present in zygotes and early embryos.
messages: Cytoplasmic vesicle
messages: Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
messages: Restricted to female reproductive tissues, specifically accumulating in storage vesicles of the unfertilized egg cell.
messages: Secreted

3702:AT1G60650
gene id: 3702:AT1G60650
uniprot id: A0A384LPG7
uniprot id: O22703
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Binds RNA and DNA sequences non-specifically. May be involved in tolerance to cold stress.
messages: By cold stress. Down-regulated by dehydration.
messages: Expressed in roots, rosette and cauline leaves, stems, floral buds and flowers.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G52520
gene id: 3702:AT1G52520
uniprot id: Q9SSQ4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the FHY3/FAR1 family.
messages: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time.
messages: Up-regulated in hypocotyls by far-red light treatment.

3702:AT5G11040
gene id: 3702:AT5G11040
uniprot id: Q9FY61
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRS120 family.
messages: Cytokinesis-defective and seedling-lethal phenotype.
messages: Early endosome
messages: Expressed in roots, leaves, stems and flowers.
messages: Part of the multisubunit TRAPP (transport protein particle) II complex composed of BET3, BET5, TRS20, TRS23, TRS31, TRS33, TRS65, TRS85, TRS120 and TRS130.
messages: Specific subunit of the TRAPP II complex, a highly conserved vesicle tethering complex that is required for the proper transport of proteins in post-Golgi trafficking pathways to the growing cell plate in mitotic active cells (PubMed:20713617, PubMed:21689172, PubMed:24443495). Required for the polarized and selective transport of PIN2 and probably PIN1 to the plasma membrane (PubMed:21689172, PubMed:24443495). Not required for ER-to-Golgi as well as biosynthetic and endocytic vacuolar transport (PubMed:21689172).
messages: trans-Golgi network

3702:AT1G72140
gene id: 3702:AT1G72140
uniprot id: Q9C7U1
names: Induction
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
messages: Expressed in shoots and roots.
messages: Intron retention.
messages: Membrane
messages: Up-regulated upon nematode infection.

3702:AT4G37070
gene id: 3702:AT4G37070
uniprot id: A0A178UVZ8
uniprot id: A0A5S9XZM2
uniprot id: A8MR01
uniprot id: O23179
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the patatin family.
messages: Cytoplasm
messages: Decreased number of lateral roots.
messages: Expressed specifically in roots and root hairs.
messages: Lipolytic acyl hydrolase (LAH).
messages: Phosphorylated at Ser-399 by CPK3. Phosphorylation enhances PLP1 activity towards phosphatidylcholine.
messages: Possesses non-specific lipolytic acyl hydrolase (LAH) activity. Catalyzes the hydrolysis of the neutral lipids monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and phosphatidylglycerol (PG), and less efficiently the polar lipids phosphatidylcholine (PC) and phosphatidylinositol (PI), but not the storage lipid triacylglycerol (TAG). May play a role in root development.
messages: The nitrogen atoms of the two glycine residues in the GGXR motif define the oxyanion hole, and stabilize the oxyanion that forms during the nucleophilic attack by the catalytic serine during substrate cleavage.

3702:AT2G32940
gene id: 3702:AT2G32940
uniprot id: A0A654EZS0
uniprot id: O48771
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the argonaute family. Ago subfamily.
messages: Expressed in roots, cotyledons and shoot meristematic region.
messages: Involved in transcriptional gene silencing (TGS). Component of the RISC complex that associate with the small interfering RNA (siRNA) pathway involved in direct cytosine methylation at endogenous DNA repeats. Required for the accumulation of specific siRNAs derived from transgene and heterochromatin-related endogenous loci. Involved in RNA-directed DNA methylation (RdDM) at specific endogenous loci. Probably not required for the accumulation of siRNAs derived from transgene inverted repeats that induce post-transcriptional gene silencing (PTGS). Associates mainly with small RNAs of 24 nucleotide in length and preferentially recruits small RNAs with a 5' terminal adenosine. Targeted by turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO6 function in RNA silencing.
messages: Nucleus

3702:AT3G29170
gene id: 3702:AT3G29170
uniprot id: A0A384KZ78
uniprot id: Q9LVP2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM134/TMEM230 family.
messages: Endosome
messages: Involved in trafficking and recycling of synaptic vesicles.
messages: Late endosome
messages: Membrane
messages: Vesicle
messages: autophagosome
messages: synaptic vesicle
messages: trans-Golgi network

3702:AT4G28770
gene id: 3702:AT4G28770
uniprot id: Q9SVU4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the tetraspanin (TM4SF) family.
messages: Expressed in rosette leaves.
messages: Homodimer. Constituent of tobamovirus replication complex (By similarity).
messages: May be involved in the regulation of cell differentiation.
messages: Membrane
messages: Promotes intracellular multiplication of tobamoviruses, probably being a component of the replication complex.
messages: Slightly reduced efficiency of intracellular multiplication of tobamoviruses (e.g. crucifer strain TMV-Cg), characterized by a reduced amplification of TMV-related RNAs.
messages: Vacuole membrane

3702:AT3G20470
gene id: 3702:AT3G20470
uniprot id: Q9LTP5
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Accumulates in response to flooding stress (PubMed:2152168). Induced by salicylic acid (SA) and abscisic acid (ABA) (PubMed:2152168, PubMed:18657431). Stimulated by 16-hydroxypalmitic acid (HPA), a major component of cutin (PubMed:18657431).
messages: Expressed during somatic embryogenesis, especially in cells undergoing the first anatomical modifications leading to somatic embryo development. Accumulates also during zygotic embryo development. First detected at heart-shape-torpedo transition in the whole embryos. Developmentally regulated in cotyledons and hypocotyl, being restricted to the radicule in early and late torpedo, until the embryo reaches maturity. Gradual decrease at the seed coat during seed development. After fertilization, restricted to the seed coat and endosperm.
messages: Involved in organ growth by promoting cell elongation processes.
messages: Mostly expressed in immature seed pods, and, to a lower extent, in stems and leaves (PubMed:2152168). Present in phloem and epiderm in leaves, stems, flowers and fruits (PubMed:20195610).
messages: Reduced organ length (e.g. inflorescence axis and roots).
messages: Vacuole

3702:AT3G05520
gene id: 3702:AT3G05520
uniprot id: A0A1I9LMY3
uniprot id: F4J7C4
uniprot id: O82631
uniprot id: Q541X2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the F-actin-capping protein alpha subunit family.
messages: F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (By similarity).
messages: F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
messages: Heterodimer of an alpha and a beta subunit.

3702:AT1G60200
gene id: 3702:AT1G60200
uniprot id: Q8VY15
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: PTM
names: Subcellular Location Annotation
names: Subunit
messages: Increased sensitivity to growth inhibition by abscisic acid (ABA) (PubMed:26404089). Altered transcript accumulation profiles due to impaired pre-messenger RNA (pre-mRNA) splicing (e.g. HAB1 transcripts alternative splicing) (PubMed:26404089, PubMed:28971960). These phenotypes are partially suppressed by an ectopic expression of HAB1 (PubMed:26404089).
messages: Induced by abscisic acid both at transcriptional and at post-translational (pre-mRNA splicing) levels.
messages: Nucleus
messages: Phosphorylated; the phosphorylation level is repressed by abscisic acid (ABA).
messages: RNA-binding protein that acts as a regulator of alternative pre-mRNA splicing (PubMed:26404089, PubMed:28971960). Negative regulator of responses to abscisic acid (ABA), including in early development (PubMed:26404089).
messages: Specifically associates with functional splicing complexes (By similarity). Associates with exon junction complex (EJC) proteins (By similarity).
messages: The PWI domain binds nucleic acids with significant help from its N-terminal flanking basic region. It has an equal preference for binding to single- or double-stranded species, and it contributes to RBM25 role in modulation of alternative splicing.

3702:AT4G35010
gene id: 3702:AT4G35010
uniprot id: A0A178V6I1
uniprot id: Q9SCV1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 35 family.
messages: apoplast

3702:AT3G17220
gene id: 3702:AT3G17220
uniprot id: Q9LUV1
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PMEI family.
messages: Highest expression in flowers (PubMed:14675772, PubMed:14741367, PubMed:17971035). Expressed exclusively at the pollen tube tip (PubMed:14675772, PubMed:17971035).
messages: Inhibits pectin methylesterase (PME) from flowers, siliques and pollen tube.
messages: Interacts with PPME1.
messages: The polarized accumulation at the pollen tube apex depends at least in part on local endocytosis at the flanks of the tip.
messages: apoplast

3702:AT1G20960
gene id: 3702:AT1G20960
uniprot id: Q9SYP1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DExH box helicase family.
messages: Embryo defective.
messages: Interacts with CLO.
messages: Nucleus
messages: RNA helicase that plays an essential role in pre-mRNA splicing as component of the U5 snRNP and U4/U6-U5 tri-snRNP complexes. Involved in spliceosome assembly, activation and disassembly.

3702:AT3G25690
gene id: 3702:AT3G25690
uniprot id: Q9LI74
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Defective in chloroplast photorelocation movement, leading to damage of the photosynthetic apparatus and subsequent bleaching of leaf color and necrosis under high light conditions. Chloroplasts gathered at the bottom of cells, regardless of the light conditions.
messages: Expressed in cauline leaves, rosette leaves, stems and flowers, but not in roots.
messages: Required for the positioning and movement of chloroplasts. Interacts with profilin and actin independent of its polymerization status. Regulates chloroplast localization by anchoring chloroplasts to the plasma membrane and forming a bridge to the actin cytoskeleton.
messages: The N-terminal region (1-25) is necessary and sufficient for targeting and anchoring the protein in the chloroplast envelope membrane.
messages: The actin binding motif (346-356) can function in vitro as an actin binding site.
messages: The coiled coil domain(123-341) interacts with the plasma membrane and anchors chloroplasts firmly on the plasma membrane.
messages: The proline-rich domain (648-705) mediates the interaction with profilin.
messages: chloroplast outer membrane

3702:AT2G26070
gene id: 3702:AT2G26070
uniprot id: F4ITL6
names: Disruption Phenotype
names: Function
names: Induction
names: Sequence Caution
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts at an early step in the ethylene signaling pathway. Positively regulates ETR1, leading to the negative regulation of ethylene responses.
messages: By ethylene.
messages: Endoplasmic reticulum membrane
messages: Enhanced ethylene sensitivity.
messages: Golgi apparatus membrane
messages: Interacts with ETR1 through a region corresponding to its ethylene-binding domain.
messages: Sequencing errors.
messages: Strongly expressed in 1-4-day-old seedlings in the apical hook, cotyledons, root vascular tissue, root tip and root hairs, with little or no expression in the hypocotyl. In light-grown seedlings, expression could also be seen in the apex and young leaves, and disappeared from the cotyledons by 10 days. In mature plants, expressed in floral buds, the style of mature flowers, stems and the rachis.

3702:AT5G09690
gene id: 3702:AT5G09690
uniprot id: A0A1P8BF59
uniprot id: A0A1P8BF64
uniprot id: A0A1P8BF71
uniprot id: A0A1P8BF76
uniprot id: A0A1P8BF83
uniprot id: A0A1P8BFB5
uniprot id: A0A1P8BFC1
uniprot id: Q304A0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family.
messages: Displays plantlets with retarded development under low Mg(2+) concentrations growth conditions.
messages: Endoplasmic reticulum membrane
messages: Has the ability to complement mutants in Salmonella enterica and yeast lacking magnesium transport capability.
messages: Isoform 1 is expressed in the whole plant. Isoform 4 is expressed only in roots and flowers.
messages: Low-affinity magnesium transporter that mediates the influx of magnesium.
messages: Magnesium transporter that may mediate the influx of magnesium.
messages: Membrane
messages: Sequencing errors.

3702:AT2G46494
gene id: 3702:AT2G46494
uniprot id: P0CH02
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G47870
gene id: 3702:AT1G47870
uniprot id: A0A178W9F7
uniprot id: A0A178WB46
uniprot id: F4HV47
uniprot id: Q9FV70
names: Caution
names: Developmental Stage
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the E2F/DP family.
messages: Cytoplasm
messages: Down-regulated by light.
messages: Expressed in a cell cycle-dependent manner. Not detected at the G1/S transition, but increases during the progression into S phase and peaks after the passage into G2.
messages: Expressed in meristematic areas, vascular tissues, apical part of the roots, cotyledons, upper region of the hypocotyls, trichomes, young flower buds and pollen grains.
messages: Heterodimer with DP proteins. Interacts preferentially with DPB, but also with DPA. No interaction with DPB when phosphorylated. Interacts with SKP2A, CDKA-1 and maize retinoblastoma-related protein RBR1. Component of a DREAM-like complex which modulates a variety of developmentally regulated genes and of the mitotic genes in proliferating and differentiated cells. Interacts with MYB3R3 at later stages of leaves development (PubMed:26069325).
messages: Involved in transcriptional repression. May act by repressing E2F-regulated genes in mature differentiated cells, but is not an antagonist of E2FA. Restricts cell division and is involved in the coordination between cell proliferation and endoreduplication during development. May play a role during the transition from skotomorphogenesis to photomorphogenesis. Regulated by phosphorylation-dependent proteolysis via the protein-ubiquitin ligase SCF(SKP2A) complex.
messages: Nucleus
messages: Phosphorylated by cyclin-dependent kinase. Phosphorylation is necessary to target E2FC for proteolysis.
messages: The N-terminal region (1-100) is important for both SKP2A binding and ubiquitin-mediated degradation.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G04660
gene id: 3702:AT2G04660
uniprot id: A0A178VYA9
uniprot id: Q8H1U5
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the cullin family.
messages: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication.
messages: Gametophytic lethal phenotype.
messages: Highly expressed in immature flowers. Expressed in stems, leaves and flowers.
messages: Nucleus
messages: The APC/C is composed of at least 10 subunits. Interacts with APC8, APC11, CDC27A and CDC27B.

3702:AT5G02240
gene id: 3702:AT5G02240
uniprot id: Q94EG6
names: Similarity
names: Subunit
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.
messages: Homodimer.

3702:AT2G45110
gene id: 3702:AT2G45110
uniprot id: Q9SHD1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the expansin family. Expansin B subfamily.
messages: May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity).
messages: Membrane
messages: cell wall

3702:AT3G16980
gene id: 3702:AT3G16980
uniprot id: A0A178VJH2
uniprot id: Q6NLH0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal RpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
messages: Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
messages: Component of the RNA polymerase II, IV and V complexes. Interacts with NRPD1.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements. Required for RNA silencing.
messages: No visible phenotype; due to the redundancy with NRPB9B. No effect on methylation at RdDM target sites. Nrpb9a and nrpb9b double mutants are embryo lethal.
messages: Pol IV and V functions are not impaired in nrpb9a mutants and Pol II functions are complemented by NRPB9B.
messages: nucleolus

3702:AT5G37990
gene id: 3702:AT5G37990
uniprot id: Q9FKC8
names: Cofactor
names: Similarity
names: Subunit
messages: Belongs to the methyltransferase superfamily. Type-7 methyltransferase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.

3702:AT1G56110
gene id: 3702:AT1G56110
uniprot id: A0A178WNA8
uniprot id: Q9SGT7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NOP5/NOP56 family.
messages: nucleolus

3702:AT1G52530
gene id: 3702:AT1G52530
uniprot id: A0A384KAJ2
uniprot id: Q709F6
names: Similarity
messages: Belongs to the HUS1 family.

3702:AT4G21150
gene id: 3702:AT4G21150
uniprot id: F4JIM7
uniprot id: Q93Z16
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SWP1 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Short pollen tube growth and failure to exit the style.
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3702:AT1G15020
gene id: 3702:AT1G15020
uniprot id: Q8W4J3
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: By salt and norspermidine treatments and phosphate starvation.
messages: Highly expressed in roots.
messages: Plants lacking QSOX1 display more sensitivity to the toxic cations lithium and sodium than wild-type plants.
messages: Sulfhydryl oxidase involved in the regulation of cation homeostasis. Positively regulates shoot accumulation of K(+) and inhibits accumulation of toxic cations. Acts at the level of root K(+) efflux systems involved in xylem loading (root symplast-xylem interface).
messages: cell wall

3702:AT3G46870
gene id: 3702:AT3G46870
uniprot id: Q9STF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Binds weakly to specific single strand RNA (ssRNA).
messages: chloroplast

3702:AT2G36200
gene id: 3702:AT2G36200
uniprot id: A0A178VZ08
uniprot id: F4ILV6
uniprot id: P82266
names: Function
names: Sequence Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-5/BimC subfamily.
messages: Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules (By similarity). Plays an essential role in stabilizing the mitotic spindle. Required during mitotic cytokinesis (By similarity).
messages: Sequencing errors.
messages: cytoskeleton
messages: spindle

3702:AT3G15660
gene id: 3702:AT3G15660
uniprot id: A0A178VHP8
uniprot id: Q8LBK6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glutaredoxin family. CGFS subfamily.
messages: May only reduce GSH-thiol disulfides, but not protein disulfides. Participates probably to the maturation of iron-sulfur proteins and to the regulation of the redox state of the BOLA proteins.
messages: Mitochondrion
messages: [2Fe-2S]-bridged holo-homodimer (By similarity). Interacts in vitro with SUFE1, BOLA1, BOLA2 and BOLA4 (PubMed:24203231). Interacts in vivo only with BOLA4 (PubMed:24203231).

3702:AT5G27430
gene id: 3702:AT5G27430
uniprot id: A0A178U8Y3
uniprot id: Q53YF3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SPCS3 family.
messages: Component of the signal peptidase complex (SPC) composed of a catalytic subunit SEC11 and three accessory subunits SPCS1, SPCS2 and SPCS3. The complex induces a local thinning of the ER membrane which is used to measure the length of the signal peptide (SP) h-region of protein substrates. This ensures the selectivity of the complex towards h-regions shorter than 18-20 amino acids.
messages: Endoplasmic reticulum membrane
messages: Essential component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (By similarity). Essential for the SPC catalytic activity, possibly by stabilizing and positioning the active center of the complex close to the lumenal surface (By similarity).
messages: Essential component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Essential for the SPC catalytic activity, possibly by stabilizing and positioning the active center of the complex close to the lumenal surface.

3702:AT2G03150
gene id: 3702:AT2G03150
uniprot id: F4IS91
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Defective embryo arrested at cotyledon stage (PubMed:15266054). Hypersensitivity to salt (NaCl) stress leading to reduced roots and shoots growth and altered germination, and associated with altered sodium (Na) homeostasis and over-accumulation of reactive oxygen species (ROS). Hypersensitivity to hydrogen peroxide H(2)O(2) and methyl viologen (MV) (PubMed:24009530).
messages: Expressed ubiquitously at high levels, including in guard cells.
messages: Interacts with BHLH148/RITF1.
messages: Nucleus
messages: Required for salt tolerance and sodium (Na) homeostasis after salt stress. Together with BHLH148/RITF1, regulates the transcription of several genes involved in the detoxification of reactive oxygen species (ROS) generated by salt (NaCl) stress. Binds calcium.
messages: Slightly induced by salt (NaCl) stress.

3702:AT5G56760
gene id: 3702:AT5G56760
uniprot id: Q42538
names: Activity Regulation
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the transferase hexapeptide repeat family.
messages: By cadmium (Cd). Not induced under sulfur-deficient conditions.
messages: Cytoplasm
messages: Feedback inhibitions by L-Ser and acetyl-CoA.
messages: Homomultimer.
messages: Mostly expressed in stems, flowers and siliques. Localized in vascular tissues, particularly in phloem.

3702:AT3G16785
gene id: 3702:AT3G16785
uniprot id: A0A1I9LQ38
uniprot id: A0A1I9LQ40
uniprot id: A0A1I9LQ42
uniprot id: Q9LRZ5
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the phospholipase D family.
messages: Belongs to the phospholipase D family. PXPH-PLD subfamily.
messages: Calcium-independent and PIP2-dependent.
messages: Cytoplasmic vesicle
messages: Does not require Ca(2+) or any other cation for activity.
messages: Expressed in inflorescences, flowers, siliques, stems, leaves, and roots. Highest expression in roots.
messages: Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Phosphatidylcholine-selective (PubMed:11891260). Regulates root-hair morphogenesis (PubMed:12775839). Contributes to the supply of inorganic phosphorus for cell metabolism and diacylglycerol moieties for galactolipid synthesis in phosphorus-starved roots (PubMed:16891548). Involved in root elongation during phosphate limitation (PubMed:16384909).
messages: No visible phenotype when grown under normal conditions (PubMed:16384909). No effect on root hair patterning or root hair growth (PubMed:16384909). No effect on the concentration of phospholipids and galactolipids in phosphorus-starved roots (PubMed:16891548). Pldzeta1 and pldzeta2 double mutants show a smaller decrease in phosphatidylcholine and a smaller increase in digalactosyldiacylglycerol in phosphorus-starved roots (PubMed:16891548). Pldzeta1 and pldzeta2 double mutants show reduced primary root elongation and increased lateral root elongation under low-phosphate conditions (PubMed:16384909).
messages: Transcriptionally regulated by GL2 (PubMed:12775839). Up-regulated by phosphate limitation (PubMed:16384909).

3702:AT2G06090
gene id: 3702:AT2G06090
uniprot id: Q9ZQ02
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant self-incompatibility (S1) protein family.
messages: Secreted

3702:AT4G24715
gene id: 3702:AT4G24715
uniprot id: Q9SB67
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts as a dual component transporter with NTR2.1. Required for high-affinity nitrate transport (By similarity).
messages: Bearly detected in roots and shoots.
messages: Belongs to the NAR2 family.
messages: Cell membrane
messages: Not regulated by nitrate.

3702:AT2G43960
gene id: 3702:AT2G43960
uniprot id: Q58FX2
names: Subcellular Location Annotation
messages: Nucleus

3702:AT3G63020
gene id: 3702:AT3G63020
uniprot id: A0A654FK81
uniprot id: B3H5Y2
uniprot id: Q9LYC0
names: Similarity
messages: Belongs to the fantastic four family.

3702:AT3G44310
gene id: 3702:AT3G44310
uniprot id: A0A384KJ08
uniprot id: C0SVD5
uniprot id: P32961
uniprot id: Q8LFU8
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family.
messages: Can convert indole-3-acetonitrile to the plant hormone indole-3-acetic acid.
messages: Expressed in cotyledons, hypocotyls, leaves, roots, stems, flowers and siliques.
messages: Expressed throughout development, but at a very low level during the fruiting stage.
messages: Interacts with DEK3.
messages: Produced by alternative initiation at Met-7 of isoform 1.

3702:AT4G39770
gene id: 3702:AT4G39770
uniprot id: A0A1P8B7A9
uniprot id: Q8GWG2
names: Function
names: Induction
names: Similarity
messages: Belongs to the trehalose phosphatase family.
messages: By trehalose.
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance (By similarity).
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose. Trehalose accumulation in plant may improve abiotic stress tolerance.

3702:AT4G35130
gene id: 3702:AT4G35130
uniprot id: A0A5S9XYS2
uniprot id: O49619
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: chloroplast

3702:ArthCp029
gene id: 3702:ArthCp029
uniprot id: A0A1B1W4V2
uniprot id: P19366
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12). Interacts with RBCX1 (PubMed:21922322).
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
messages: chloroplast thylakoid membrane

3702:AT2G46180
gene id: 3702:AT2G46180
uniprot id: Q8VYU6
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Golgi apparatus
messages: Golgi matrix protein playing a role in tethering of vesicles to Golgi membranes and in maintaining the overall structure of the Golgi apparatus.
messages: The C-terminal domain (556-725) is necessary and sufficient for Golgi targeting.

3702:AT1G08010
gene id: 3702:AT1G08010
uniprot id: Q6DBP8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the type IV zinc-finger family. Class A subfamily.
messages: Nucleus
messages: Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity).

3702:AT5G50140
gene id: 3702:AT5G50140
uniprot id: Q9FG97
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G23800
gene id: 3702:AT3G23800
uniprot id: A0A178VEQ9
uniprot id: A0A1I9LTQ7
uniprot id: Q9LK38
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the selenium-binding protein family.
messages: Expressed in young seedlings, mostly in roots.
messages: Slightly induced in roots by cadmium.

3702:AT5G19100
gene id: 3702:AT5G19100
uniprot id: A0A178UP54
uniprot id: Q3E9C8
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT2G29190
gene id: 3702:AT2G29190
uniprot id: Q9ZW06
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. Binds the APUM-binding elements (APBEs) in the 3'-UTR mRNA sequence of CLV1, PNH, WUS and FAS2.
messages: The pumilio repeats mediate the association with RNA by packing together to form a right-handed superhelix that approximates a half donut. The number as well as the specific sequence of the repeats determine the specificity for target mRNAs (By similarity).

3702:AT2G38695
gene id: 3702:AT2G38695
uniprot id: A0A384LAI8
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G02170
gene id: 3702:AT5G02170
uniprot id: Q8LPF4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the amino acid/polyamine transporter 2 family. Amino acid/auxin permease (AAAP) (TC 2.A.18.5) subfamily.
messages: Membrane

3702:AT5G14400
gene id: 3702:AT5G14400
uniprot id: A0A1P8BDE6
uniprot id: A0A1P8BDE8
uniprot id: A0A5S9Y4W7
uniprot id: F4K6S3
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT2G31083
gene id: 3702:AT2G31083
uniprot id: A0A178VVQ2
uniprot id: A0A1P8B327
uniprot id: Q8S8N2
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate.
messages: Mostly expressed in roots, and, to a lower extent, in seedlings, stems, apex, flowers and siliques.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-76 enhances binding affinity of the CLE5p peptide for its receptor.
messages: extracellular space

3702:AT3G22550
gene id: 3702:AT3G22550
uniprot id: Q8L471
names: Function
names: Induction
names: Similarity
names: Subunit
messages: Belongs to the FLZ family.
messages: Down-regulated in response to mild as well as prolonged energy depletion (PubMed:26442059). Up-regulated by glucose and sucrose (PubMed:26442059).
messages: Interacts with KIN10 and KIN11 via its FLZ-type zinc finger domain (PubMed:29945970). Interacts with KINB1, KINB2, KINB3 and SNF4 via its N-terminal part (PubMed:29945970). Interacts with HB21/ZHD3 (Ref.8).
messages: May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway.

3702:AT4G31940
gene id: 3702:AT4G31940
uniprot id: A0A178V6C0
uniprot id: Q9SZ46
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: By iron deficiency, mainly in roots.
messages: Can hydroxylate xanthotoxin (8-methoxypsoralen) to form 5-hydroxyxanthotoxin (5-hydroxy-8-methoxypsoralen) in vivo and in vitro (PubMed:18291319). Involved in the early iron deficiency response, possibly through an IDE1-like mediated pathway (PubMed:21315474). Involved in the pathway of sideretin biosynthesis from feruloyl CoA, a redox-active catecholic metabolite exuded by roots in response to iron deficiency in order to facilitate the uptake of iron; this pathway consists in the successive conversion from feruloyl CoA to scopoletin, from scopoletin to fraxetin and from fraxetin to sideretin (PubMed:29581584). Catalyzes the biosynthesis of sideretin via fraxetin hydroxylation (PubMed:29581584).
messages: Expressed in both primary and lateral roots under iron-deficient conditions, except in apical root zones, and mostly in the root epidermal layer.
messages: Increased root length at seedling stage (PubMed:21315474). Accumulation of fraxetin, but loss of sideretin root secretion in response to iron deficiency. Slightly increased iron-uptake ability at elevated pH leading to a better fitness of plants, due to the presence of high fraxetin content (PubMed:29581584).
messages: Membrane
messages: Plants overexpressing CYP82C4, can hydroxylate and subsequently glycosylate 8-methoxypsoralen.

3702:AT5G59305
gene id: 3702:AT5G59305
uniprot id: Q8LDN4
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CLV3/ESR signal peptide family.
messages: Extracellular signal peptide that regulates cell fate.
messages: The O-glycosylation (arabinosylation) of the hydroxyproline Pro-64 enhances binding affinity of the CLE46p peptide for its receptor.
messages: extracellular space

3702:AT4G31890
gene id: 3702:AT4G31890
uniprot id: A0A384KFK9
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G27900
gene id: 3702:AT1G27900
uniprot id: Q93Y16
names: Function
names: Similarity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. PRP22 sub-subfamily.
messages: May be involved in pre-mRNA splicing.

3702:AT1G27680
gene id: 3702:AT1G27680
uniprot id: A0A5S9W3A4
uniprot id: P55230
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Activated by 3'phosphoglycerate, inhibited by orthophosphate. Allosteric regulation.
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Heterotetramer.
messages: Probably are expressed in roots, flowers and/or seeds.
messages: This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
messages: chloroplast

3702:AT3G49830
gene id: 3702:AT3G49830
uniprot id: Q9M2X5
names: Similarity
messages: Belongs to the RuvB family.

3702:AT5G25080
gene id: 3702:AT5G25080
uniprot id: A0A178UE81
uniprot id: Q93VA9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the C1D family.
messages: Cytoplasm
messages: Monomer and homodimer.
messages: Nucleus
messages: Plays a role in the recruitment of the exosome to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA.
messages: nucleolus

3702:AT2G27140
gene id: 3702:AT2G27140
uniprot id: Q9ZVC6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Membrane

3702:AT2G35270
gene id: 3702:AT2G35270
uniprot id: O82166
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Expressed throughout floral primordia at stages 1 through 4. At stage 6 and later, expression is confined to reproductive organ primordia. At stages later than stage 10, localizes in developing ovules and anther locules.
messages: Overexpression of AHL21 results in reproductive defects such as excessive outgrowth of stigmatic tissues, short valves, and excessive proliferation of a carpelloid organ at the lateral side of a pistil with exposed ovules.
messages: Preferentially expressed in roots, but also in flowers and leaves. Detected in the inflorescence meristem, floral primordia and developing reproductive organs.
messages: Reproductive defects.
messages: The PPC domain mediates interactions between AHL proteins.
messages: Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). Binds to the MARs present in the ETTIN (ETT) promoter leading to a negative regulation of its gene expression. Functions as a molecular node downstream of the homeotic protein AGAMOUS (AG), regulating patterning and differentiation of reproductive organs. Acts as a chromatin remodeling factor that modifies the architecture of ETTIN (ETT) chromatin by modulating H3 methylation leading to the regulation of ETT expression. Seems to be involved in the regulation of a set of reproductives genes including CRABS CLAW (CRC), JAGGED (JAG) and KNUCKLES (KNU).
messages: nucleoplasm

3702:AT3G61550
gene id: 3702:AT3G61550
uniprot id: Q9M313
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT1G50110
gene id: 3702:AT1G50110
uniprot id: A0A178WB05
uniprot id: A0A1P8AMV4
uniprot id: Q9LPM9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
messages: Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity).
messages: Cytoplasm

3702:AT2G18920
gene id: 3702:AT2G18920
uniprot id: A0A178VYS7
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G63810
gene id: 3702:AT5G63810
uniprot id: A0A654GDW4
uniprot id: Q9FN08
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Ubiquitous.
messages: apoplast

3702:AT3G27940
gene id: 3702:AT3G27940
uniprot id: A0A654FBB8
uniprot id: Q9LIJ0
names: Similarity
messages: Belongs to the LOB domain-containing protein family.

3702:AT1G73590
gene id: 3702:AT1G73590
uniprot id: A0A178WFG7
uniprot id: Q9C6B8
names: Caution
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Acts as a component of the auxin efflux carrier. Seems to be involved in the basipetal auxin transport. Mediates the formation of auxin gradient which is required to ensure correct organogenesis. Coordinated polar localization of PIN1 is directly regulated by the vesicle trafficking process and apical-basal PIN1 polarity also depends on the phosphorylation of conserved serine residues by PID kinase. The ARF-GEF protein GNOM is required for the correct recycling of PIN1 between the plasma membrane and endosomal compartments.
messages: Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
messages: Cell membrane
messages: Down-regulated by endoplasmic reticulum stress treatment.
messages: Expressed at the basal side of elongated parenchymatous xylem cells.
messages: Expressed during embryogenesis. Already detected in the 8-cell stage at the inner cell boundaries. Later, polarity is gradually established at the basal side of provascular cells then in epidermis cells.
messages: Interacts with TOPP4 (PubMed:11574889). Interacts with FYPP1 and FYPP3 (PubMed:22715043).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May act as a component of the auxin efflux carrier.
messages: Membrane
messages: Plants exhibit developed naked, pin-shaped inflorescences and abnormalities in the number, size, shape, and position of lateral organs.

3702:AT5G19520
gene id: 3702:AT5G19520
uniprot id: A0A654G2J2
uniprot id: Q84M97
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MscS (TC 1.A.23) family.
messages: Cell membrane
messages: Detected in the epidermis, cortex, and endodermis of the root tip.
messages: Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer.
messages: Membrane

3702:AT5G54800
gene id: 3702:AT5G54800
uniprot id: A0A178UL59
uniprot id: Q9M5A9
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the TPT transporter family. GPT (TC 2.A.7.9) subfamily.
messages: Endoplasmic reticulum membrane
messages: Expressed during the transient accumulation of starch in the developing seeds. Decline rapidly 8 days after flowering. Not detected in mature seeds.
messages: Expressed in seeds, flowers, rosette leaves, and roots, with highest levels found in stamens. Found in the root cap, in guard cells and in mesophyll cells.
messages: Gametophytic lethal phenotype in homozygous plants.
messages: Glucose 6-phosphate (Glc6P) transporter (PubMed:15722468). Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate (PubMed:15722468). Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP) (PubMed:15722468). Required for pollen maturation and embryo sac development (PubMed:15722468, PubMed:20659277). Preferentially exchanges Glc6P for ribulose-5-phosphate (Ru5P) in reconstituted yeast proteoliposomes (PubMed:32111666). May supply the substrate (Glc6P) for OPPP reactions inside peroxisomes and exchange it with the product Ru5P which leaves the organelle (PubMed:32111666).
messages: Membrane
messages: Peroxisome membrane
messages: chloroplast membrane

3702:AT3G59740
gene id: 3702:AT3G59740
uniprot id: Q9ZR79
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Cell membrane
messages: In the C-terminal section; belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: In the N-terminal section; belongs to the leguminous lectin family.
messages: Increased susceptibility to the oomycetes Phytophthora brassicae and Phytophthora capsici and to the bacteria Pseudomonas syringae, characterized by stronger necrotic symptoms.
messages: Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici and to the pathogenic bacteria Pseudomonas syringae.

3702:AT2G39250
gene id: 3702:AT2G39250
uniprot id: A0A1P8B311
uniprot id: Q6PV67
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: 'Schnarchzapfen' means 'snoring cone' in German.
messages: Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Repressor of flowering.
messages: Repressed by miR172 after photoperiod changement.

3702:AT3G06850
gene id: 3702:AT3G06850
uniprot id: A0A654F6G8
uniprot id: Q9M7Z1
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Barely detected in non senescent green leaves, accumulated slightly at the early stage of leaf senescence and strongly expressed at the late stage of leaf senescence.
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: By dark treatment (at the protein level). Induced by the calmodulin antagonists trifluoperazine and fluphenazine in darkness. Down-regulated by sucrose in a hexokinase dependent manner (at protein level). Up-regulated by Leucine and its derivative alpha-keto acid (KIC).
messages: Expressed in the non-photosynthetic organs such as siliques, flowers and roots.
messages: Forms a 24-polypeptide structural core with octahedral symmetry.
messages: Mitochondrion matrix
messages: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). Within this complex, the catalytic function of this enzyme is to accept, and to transfer to coenzyme A, acyl groups that are generated by the branched-chain alpha-keto acid decarboxylase component (By similarity). Required during sugar starvation and acts under the control of a sugar-sensing mechanism involving Ser/Thr kinases and phosphatases.

3702:AT3G21840
gene id: 3702:AT3G21840
uniprot id: A0A178VAP4
uniprot id: Q9LSY0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SKP1 family.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity).
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.
messages: Nucleus
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.
messages: Restricted to siliques.

3702:AT5G02450
gene id: 3702:AT5G02450
uniprot id: A0A178UKY0
uniprot id: Q9LZ57
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL36 family.

3702:AT1G10810
gene id: 3702:AT1G10810
uniprot id: A0A384KIU9
uniprot id: Q9C5B9
names: Caution
names: Similarity
messages: Belongs to the aldo/keto reductase family.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G03280
gene id: 3702:AT2G03280
uniprot id: A0A654ERH9
uniprot id: Q6E279
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Glycosyltransferase involved in the formation of rhamnogalacturonan I (RG-I) oligosaccharides in the seed coat mucilage, which is a specialized cell wall with abundant RG-I (By similarity). Transfers the rhamnose residue from UDP-beta-L-rhamnose to RG-I oligosaccharides (PubMed:30082766).
messages: Golgi apparatus membrane

3702:AT3G52750
gene id: 3702:AT3G52750
uniprot id: A0A178V810
uniprot id: A0A1I9LSJ8
uniprot id: Q9LXJ0
names: Caution
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Aggregates to form a contractile ring-like structure; contraction of the ring was accompanied by an increase in the filament turnover rate (PubMed:27322658). Self-interacts and binds to FTSZ1 in heteropolymers to form two morphologically distinct types of filaments, termed type-I (smooth filaments) and -II (rough filaments), in a GTP-dependent manner (PubMed:27322658). Part of a complex made of ARC3, ARC6, FTSZ1 and FTSZ2 (PubMed:22823492). Interacts (via C-terminus) with ARC6. Interacts with CDP1/PARC6 (PubMed:28984364). Binds to PGK1 (PubMed:22823492).
messages: Belongs to the FtsZ family.
messages: Exhibits GTPase activity (By similarity). Component of the plastid division machinery that forms a contractile ring at the division site (PubMed:25731613). Contributes to plastid division in the vegetative shoot apex, at the shoot apical meristem (SAM) where the proplastid-to-chloroplast transition takes place (PubMed:29920253).
messages: Phosphorylation at Thr-282 is required for the formation of contractile ring at the chloroplast midpoint.
messages: Slightly reduced number of large chloroplasts due to impaired plastid division (PubMed:25731613). Stronger effects on pastid division in the shoot apex, where the proplastid-to-chloroplast transition takes place, than in mature leaves (PubMed:29920253). Increased plastid volume in the shoot apical meristem (SAM), including the central zone as well as peripheral zone of L1, the outermost layer, and the peripheral zone of L3 (PubMed:29920253).
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: chloroplast stroma
messages: chloroplast thylakoid membrane

3702:AT4G19990
gene id: 3702:AT4G19990
uniprot id: A0A1P8B4E0
uniprot id: A0A1P8B4E2
uniprot id: A0A1P8B4E6
uniprot id: A0A2H1ZEP3
uniprot id: F4JU19
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FHY3/FAR1 family.
messages: Nucleus
messages: Putative transcription activator involved in regulating light control of development.

3702:AT1G72150
gene id: 3702:AT1G72150
uniprot id: Q56WK6
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: 'Patella' means 'small plate' in Latin.
messages: Accumulates during flower development (at protein level).
messages: Belongs to the patellin family.
messages: Carrier protein that may be involved in membrane-trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules and promotes their transfer between the different cellular sites. Binds to phosphoinositides with a preference for PtdIns(5)P, PtdIns(4,5)P2 and PtdIns(3)P.
messages: Cytoplasm
messages: Expressed ubiquitously with higher levels in expanding roots and leaves (at protein level).
messages: Interacts with the deubiquitinating enzyme AMSH3.
messages: Membrane

3702:AT3G45590
gene id: 3702:AT3G45590
uniprot id: A0A5S9XJR3
uniprot id: Q2HIF6
uniprot id: Q9M1E8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tRNA-intron endonuclease family.
messages: Constitutes one of the two catalytic subunit of the tRNA-splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural features of the tRNA body. Probably carries the active site for 5'-splice site cleavage (By similarity).
messages: Nucleus
messages: tRNA splicing endonuclease is a heterotetramer composed of SEN2, SEN15, SEN34/LENG5 and SEN54.

3702:AT5G19600
gene id: 3702:AT5G19600
uniprot id: A0A654G2P3
uniprot id: Q0WVG5
uniprot id: Q94LW6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
messages: Membrane

3702:AT3G20140
gene id: 3702:AT3G20140
uniprot id: A0A384LG79
uniprot id: Q9LJY4
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G45775
gene id: 3702:AT5G45775
uniprot id: A0A178UAV2
uniprot id: P42794
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Component of the large ribosomal subunit.
messages: Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel.
messages: Cytoplasm
messages: Nucleus
messages: Shown to be produced only by RPL11D so far.
messages: There are four genes for RPL11 in A.thaliana.

3702:AT3G15890
gene id: 3702:AT3G15890
uniprot id: Q9LSC2
names: Similarity
messages: Belongs to the protein kinase superfamily. Tyr protein kinase family.

3702:AT4G16570
gene id: 3702:AT4G16570
uniprot id: Q944R7
names: Function
names: Similarity
messages: Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA).
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. PRMT7 subfamily.

3702:AT1G18420
gene id: 3702:AT1G18420
uniprot id: A0A1P8AQE2
uniprot id: A0A5S9V191
uniprot id: Q9LPQ8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aromatic acid exporter (TC 2.A.85) family.
messages: Malate transporter.
messages: Membrane

3702:AT4G22666
gene id: 3702:AT4G22666
uniprot id: Q1G3I0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Probable lipid transfer protein.

3702:AT5G24020
gene id: 3702:AT5G24020
uniprot id: A0A178UDI3
uniprot id: Q9MBA2
names: Activity Regulation
names: Caution
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Accumulates during seed germination, at the beginning of rapid greening.
messages: Belongs to the ParA family. MinD subfamily.
messages: Heterogeneous population of chloroplasts in mesophyll cells and petals, with normal and larger plastids, due to reduced chloroplast divisions and asymmetrically constricted chloroplasts (PubMed:18204083, PubMed:23936263). Contains highly elongated and multiple-arrayed chloroplasts in developing green tissues (PubMed:18204083). Formation of some FtsZ rings that fail to initiate or progress the membrane constriction of developing chloroplasts (PubMed:18204083). Normal shape and number of etioplasts in cotyledons (PubMed:23936263).
messages: Homodimer (Probable). Interacts with MINE1 (PubMed:16014621, PubMed:16146521, PubMed:17855384). Binds to ARC3 (PubMed:17304239). Interacts with MCD1 (PubMed:19135368). Interacts with CDP1/PARC6 (PubMed:28984364).
messages: Stimulated ATPase activity by MINE1.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Together with ARC3 and MCD1, regulates FtsZ ring positioning in chloroplasts in an ARC6-dependent manner (PubMed:29967285, PubMed:28984364, PubMed:23936263). Calcium-dependent ATPase required for the correct placement of the plastid division site. Inhibits FtsZ filament and ring formation in the plastid. Mediates inhibition of plastid division (PubMed:28984364). In cooperation with MINE1, prevents FtsZ ring formation anywhere outside of the mid-plastids.
messages: chloroplast inner membrane

3702:AT1G04635
gene id: 3702:AT1G04635
uniprot id: A0A178W961
uniprot id: Q6AWV1
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
messages: Component of nuclear RNase P and RNase MRP ribonucleoproteins (By similarity). Interacts with GAF1/RPP30 (PubMed:22509260).
messages: Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
messages: Defective embryo arrested at the globular stage.
messages: Essential protein required during embryogenesis (PubMed:15266054). Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).
messages: nucleolus

3702:AT3G02090
gene id: 3702:AT3G02090
uniprot id: A0A178V9A9
uniprot id: Q42290
names: Activity Regulation
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase M16 family.
messages: Binding to the alpha subunit is required for catalytic activity.
messages: Binds 1 zinc ion per subunit.
messages: Catalytic subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins (By similarity). Preferentially, cleaves after an arginine at position P2 (By similarity).
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Heterodimer of an alpha subunit and a beta subunit subunits, forming the mitochondrial processing protease (MPP) in which the alpha subunit is involved in substrate recognition and binding and the beta subunit is the catalytic subunit (By similarity). Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 10 subunits. The complex is composed of 3 respiratory subunits cytochrome b (MT-CYB), cytochrome c1 (CYC1-1 or CYC1-2) and Rieske protein (UCR1-1 or UCR1-2), 2 core protein subunits MPPalpha1 (or MPPalpha2) and MPPB, and 5 low-molecular weight protein subunits QCR7-1 (or QCR7-2), UCRQ-1 (or UCRQ-2), QCR9, UCRY and probably QCR6-1 (or QCR6-2) (PubMed:18189341, PubMed:18305213). The complex exists as an obligatory dimer and forms supercomplexes (SCs) in the inner mitochondrial membrane with NADH-ubiquinone oxidoreductase (complex I, CI), resulting in different assemblies (supercomplexes SCI(1)III(2) and SCI(2)III(4)) (PubMed:12970493).
messages: May be due to a competing donor splice site.
messages: Mitochondrion
messages: Mitochondrion inner membrane

3702:AT5G38670
gene id: 3702:AT5G38670
uniprot id: A0A178UKQ4
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G42270
gene id: 3702:AT2G42270
uniprot id: O48534
names: Function
names: Subcellular Location Annotation
messages: Nucleus
messages: RNA helicase that plays an essential role in pre-mRNA splicing as component of the U5 snRNP and U4/U6-U5 tri-snRNP complexes. Involved in spliceosome assembly, activation and disassembly.

3702:AT1G29300
gene id: 3702:AT1G29300
uniprot id: A0A178WMX1
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT2G13542
gene id: 3702:AT2G13542
uniprot id: Q2V485
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT4G27640
gene id: 3702:AT4G27640
uniprot id: A0A178V675
uniprot id: Q8W498
names: Subcellular Location Annotation
messages: Cytoplasm

3702:AT4G15940
gene id: 3702:AT4G15940
uniprot id: Q93ZE5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAH family.
messages: Mitochondrion
messages: Probable acylpyruvase. Binds copper in vitro.

3702:AT3G12110
gene id: 3702:AT3G12110
uniprot id: A0A384KGP1
uniprot id: P53496
uniprot id: Q541W9
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins.
messages: Belongs to the actin family.
messages: Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. The binding of profilin to monomeric G-actin cause the sequestration of actin into profilactin complexes, and prevents the polymerization.
messages: Preferentially expressed in young and expanding tissues, floral organ primordia, developing seeds, and emerging inflorescence. Displays a very high expression level in mature pollen and pollen tubes. Little or no reproductive-gene expression is detected in vegetative organs, such as root, stems, leaves, sepals and petals.
messages: Significantly expressed during endosperm, ovule and embryo development.
messages: There are 8 actin genes in A.thaliana.
messages: cytoskeleton

3702:AT3G50090
gene id: 3702:AT3G50090
uniprot id: Q9SN09
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the REXO1/REXO3 family.
messages: Nucleus
messages: Plants do not show a phenotype alteration due to the redundancy with other SDN ribonucleases.
messages: Putative 3'-5' exonuclease degrading single-stranded small RNAs.

3702:AT2G02130
gene id: 3702:AT2G02130
uniprot id: A0A178VXG1
uniprot id: Q9ZUL7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DEFL family.
messages: Confers broad-spectrum resistance to pathogens.
messages: Expressed in the whole plant except roots.
messages: Secreted

3702:AT5G24314
gene id: 3702:AT5G24314
uniprot id: Q8VZV9
names: Disruption Phenotype
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino plants with defective chloroplasts containing a few appressed membranes but lacking thylakoids, even when grown under normal light conditions. Reduced plastid-encoded RNA polymerase (PEP) activity.
messages: By light.
messages: Component of the transcriptionally active chromosome (TAC) complexes. Interacts with FLN1, PTAC10, PTAC12 and PTAC14.
messages: Essential for chloroplast development, especially for thylakoid formation. Involved in plastid gene expression, probably by maintaining plastid-encoded RNA polymerase (PEP) activity.
messages: Mostly expressed in leaves, flowers and seedlings, and, to a lower extent, in roots and stems.
messages: chloroplast

3702:AT5G15120
gene id: 3702:AT5G15120
uniprot id: Q9LXG9
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine dioxygenase family.
messages: Binds 1 Fe(2+) cation per subunit.
messages: Catalyzes the oxidation of N-terminal cysteine residues (N-Cys), thus preparing the protein for N-end rule pathway-mediated proteasomal degradation, upstream of the N-end rule enzymes ATE1, ATE2 and PRT6 (PubMed:24599061, PubMed:29848548). Controls the preparation of the group VII ethylene response factor (ERF-VII) proteins for degradation via the 26S proteasome N-end rule pathway (PubMed:24599061, PubMed:29848548). Acts as an oxygen sensor that controls the stability of ERF-VII proteins, which are stabilized in flooding-induced hypoxia, and regulate transcriptional adaptation to these adverse conditions (PubMed:28332493, PubMed:29848548). Not active on Cys located inside or at the C-terminus of a peptide (PubMed:24599061). Acts redundantly with PCO2 to repress the anaerobic response (PubMed:24599061).
messages: Cytoplasm
messages: Expressed throughout development, with the highest expression in mature siliques and during seed germination.
messages: Nucleus
messages: Up-regulated by hypoxia (PubMed:20097791). Up-regulated by the ERF-VII transcription factor RAP2-12 during hypoxia (PubMed:24599061).

3702:AT5G20480
gene id: 3702:AT5G20480
uniprot id: C0LGT6
names: Disruption Phenotype
names: Domain
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Autophosphorylated after elicitation with elfl18. Autophosphorylation is inhibited by the binding with avrPto1. Phosphorylation at T-836 is required for immune signaling.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Binds to Pseudomonas syringae AvrPto1 and (via the kinase and cytoplasmic domains) to hopD2. Interacts with SERK3/BAK1, SERK4/BKK1, SERK1 and SERK2 in a specific ligand-induced manner. Binds to IOS1 (PubMed:27317676). Binds to BIK1 in the absence of pathogen elicitor; dissociates upon pathogen-associated molecular pattern (PAMP)-triggered activation (PubMed:29649442).
messages: Cell membrane
messages: Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs); phosphorylates BIK1 upon elicitation to regulate immune responses such as defense hormone expression (e.g. jasmonic acid (JA) and salicylic acid (SA)) (PubMed:29649442). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response while interaction with hopD2 decreases the phosphorylation level of EFR upon elf18 treatment. Specific endoplasmic reticulum quality control components (ERD2B, CRT3, UGGT and STT3A) are required for the biogenesis of EFR.
messages: Endomembrane system
messages: Enhanced susceptibility to R.radiobacter.
messages: Polyubiquitinated at the kinase domain mediated by P.syringae AvrPtoB.
messages: The last two LRR (561-597) are necessary for elf18 binding and functionality.

3702:AT1G65670
gene id: 3702:AT1G65670
uniprot id: A0A654ELC4
uniprot id: Q1PFG4
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT1G33612
gene id: 3702:AT1G33612
uniprot id: F4HR92
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RLP family.
messages: Cell membrane
messages: Involved in perception of extracellular signals.

3702:AT3G28610
gene id: 3702:AT3G28610
uniprot id: Q9LJJ5
names: Induction
names: Similarity
messages: Belongs to the AAA ATPase family. BCS1 subfamily.
messages: Induced in roots by salt stress.

3702:AT5G24470
gene id: 3702:AT5G24470
uniprot id: A0A654G3T3
uniprot id: Q6LA42
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ARR-like family.
messages: Interacts with ADO1 and ADO2 (PubMed:15310821, PubMed:18562312). Interacts with SPY (via N-terminus) (PubMed:31899321).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Lacks the phospho-accepting Asp (here Glu-102), present in the receiver domain, which is one of the conserved features of two-component response regulators (ARRs) family.
messages: Nucleus
messages: O-fucosylated by SPY (PubMed:31899321). O-fucosylation promotes APRR5 proteolysis (PubMed:31899321).
messages: Phosphorylation varies throughout the diurnal cycle and enhances ADO1 binding.
messages: The expression of APRR9, APRR7, and APRR5 requires the presence of LWD1 and/or LWD2, indicating the existence of a positive feedback loop within the circadian clock.
messages: Transcriptional repressor of CCA1 and LHY, thereby controlling photoperiodic flowering response. Involved in the positive and negative feedback loops of the circadian clock. With RVE8, forms a negative feedback loop of the circadian clock (PubMed:21483796). Expression of several members of the ARR-like family is controlled by circadian rhythm. Proteolytic substrate of the E3 ubiquitin ligase SCF(ADO1) complex. APRR9, APRR7, and APRR5 coordinately act on the upstream region of the target genes to repress their expression from noon until midnight. The particular coordinated sequential expression of APRR9, APRR7, APRR5, APRR3 and APPR1 result to circadian waves that may be at the basis of the endogenous circadian clock. Negative regulator of shade avoidance response. Involved in the inhibition of leaf expansion in shade avoidance response.

3702:AT4G11630
gene id: 3702:AT4G11630
uniprot id: A0A654FNE6
uniprot id: Q9T0D0
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.

3702:AT5G65560
gene id: 3702:AT5G65560
uniprot id: Q9LSL9
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3702:AT1G31450
gene id: 3702:AT1G31450
uniprot id: Q9C864
names: Similarity
messages: Belongs to the peptidase A1 family.

3702:AT3G08820
gene id: 3702:AT3G08820
uniprot id: A0A654F5A2
uniprot id: Q9SR82
names: Similarity
messages: Belongs to the PPR family. PCMP-H subfamily.

3702:AT5G51760
gene id: 3702:AT5G51760
uniprot id: A0A1P8BDH5
uniprot id: A0A654GAC6
uniprot id: Q9FLI3
names: Cofactor
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: By ABA.
messages: During germination, expressed in the embryo, vascular bundles and the root cap. In 6-day-old seedlings, expression in seed coat/endosperm disappears is detected only at the bases of the lateral root buds. Expressed in developing an mature siliques from 10 to 16 days after flowering (DAF).
messages: Hypersensitivity to ABA, salt and sucrose during seed germination.
messages: Negative regulator of abscisic acid (ABA) responses during seed germination.

3702:AT5G40720
gene id: 3702:AT5G40720
uniprot id: Q9FM26
names: Similarity
messages: Belongs to the glycosyltransferase 92 family.

3702:AT2G33233
gene id: 3702:AT2G33233
uniprot id: P82764
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family.
messages: Secreted

3702:AT5G10520
gene id: 3702:AT5G10520
uniprot id: A0A178UTT7
uniprot id: A0A1R7T399
uniprot id: Q8H1D6
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: By fungal pathogens such as Phytophthora infestans and Botrytis cinerea. Promoted by ethylene in the vascular cylinder of primary roots and in the root cortex in the root/hypocotyl junction zone.
messages: Cytoplasm
messages: Endomembrane system
messages: Interacts with ARAC5 and ARAC10.
messages: Mostly expressed in vasculature, hydathode endothem, leaf mesophyll cells and trichomes.
messages: Nucleus

3702:AT2G15530
gene id: 3702:AT2G15530
uniprot id: Q9ZQF9
names: Disruption Phenotype
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RING-type zinc finger family.
messages: E3 ubiquitin-protein ligase that functions as regulator of MED25 stability by targeting MED25 for degradation in a RING-H2-dependent way. Proteasome-dependent degradation of MED25 seems to activate its function as positive regulator of FLOWERING LOCUS T (FT) and is important to induce the expression of FT and consequently to promote flowering.
messages: Interacts with MED25 and UBC11.
messages: No visible phenotype under normal growth conditions, but the double mutant plants mbr1-1 and mbr2-1 show delayed flowering.
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

3702:AT3G12200
gene id: 3702:AT3G12200
uniprot id: Q9LHI7
names: Function
names: Similarity
messages: Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
messages: May be involved in plant development processes.

3702:AT3G49620
gene id: 3702:AT3G49620
uniprot id: Q8H113
names: Cofactor
names: Induction
names: Similarity
names: Tissue Specificity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: By dark.
messages: Expressed in senescent leaves.

3702:AT3G02645
gene id: 3702:AT3G02645
uniprot id: P0C897
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0481 family.
messages: Membrane

3702:AT5G63610
gene id: 3702:AT5G63610
uniprot id: A0A178U8W4
uniprot id: Q84TI6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
messages: Expressed in roots, leaves and stems. Expressed in young dividing tissue, such as shoot and root tips, lateral root primordia, young leaves and flowers. Expressed in the inflorescence meristem, inflorescence stem and young flowers.
messages: Interacts with MED14, HDA19 and LUG. Interacts with KIN10 (PubMed:23229550).
messages: Involved in cell differentiation. Required for the specification of stamen and carpel identities and for the proper termination of stem cells in the floral meristem.
messages: Nucleus

3702:AT4G39050
gene id: 3702:AT4G39050
uniprot id: A0A178UX09
uniprot id: Q8W5R5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
messages: Mitochondrion

3702:AT1G17170
gene id: 3702:AT1G17170
uniprot id: Q9SHH6
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GST superfamily. Tau family.
messages: By acetochlor, metolachlor, 2,4,6-trinitrotoluene (TNT) and 2,6-dinitrotoluene (2,6-DNT).
messages: May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.
messages: cytosol

3702:AT1G68210
gene id: 3702:AT1G68210
uniprot id: A0A5S9WSX3
uniprot id: Q9C9F6
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ARR-like family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Lacks the phospho-accepting Asp (here Asn-65), present in the receiver domain, which is one of the conserved features of the two-component response regulators (ARRs) family.
messages: Nucleus

3702:AT1G18690
gene id: 3702:AT1G18690
uniprot id: Q9M9U0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 34 family.
messages: Golgi apparatus membrane
messages: Xylosyltransferase specific to UDP-D-xylose that accepts cellohexaose as substrate to produce xyloglucan.

3702:AT1G22280
gene id: 3702:AT1G22280
uniprot id: Q9LME4
names: Cofactor
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Abnormal hypocotyl elongation under continuous red light.
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Interacts with phytochromes (via N-terminus).
messages: Involved in the regulation of phytochrome signaling. May regulate phytochrome-interacting factor 3 (PIF3) through the dephosphorylation of phytochrome.
messages: Nucleus

3702:AT2G13540
gene id: 3702:AT2G13540
uniprot id: Q9SIU2
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NCBP1 family.
messages: Component of the cap-binding complex (CBC), which binds cotranscriptionally to the 5'-cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary miRNA processing. In the CBC complex, ABH1/CBP80 does not bind directly capped RNAs (m7GpppG-capped RNA) but is required to stabilize the movement of the N-terminal loop of CBP20 and lock the CBC into a high affinity cap-binding state with the cap structure. Involved in flowering regulation, possibly by regulating pre-mRNA splicing of FLC gene. Acts as a negative regulator of abscisic acid signaling in guard cells.
messages: Component of the nuclear cap-binding complex (CBC), a heterodimer composed of ABH1/CBP80 and CBP20 that interacts with m7GpppG-capped RNA.
messages: Cytoplasm
messages: Expressed in all tissues analyzed, including roots, stems, leaves and flowers.
messages: In contrast to other organisms, the CBC complex is apparently not essential for nonsense-mediated mRNA decay (NMD) in Arabidopsis.
messages: Nucleus
messages: Stomatal closing and reduced wilting during drought due to abscisic acid-hypersensitivity in early abscisic acid signaling. Abscisic acid-hypersensitive cytosolic calcium increases in guard cells.

3702:AT5G11740
gene id: 3702:AT5G11740
uniprot id: Q9LYF6
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the AG-peptide AGP family.
messages: Cell membrane
messages: Contains 4-hydroxyproline; hydroxylated on Pro-27, Pro-29 and Pro-31.
messages: Expressed in reproductive tissues. Expressed in chalaza, funiculus, stigma, septum, style, integument and transmitting tract.
messages: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
messages: Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

3702:AT5G28750
gene id: 3702:AT5G28750
uniprot id: A0A178USC3
uniprot id: Q9LKU2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TatA/E family.
messages: In thylakoid membranes, TATC and TATB form a large receptor complex, containing about eight TATC-TATB pairs, which binds the precursor protein. Twin arginine signal peptide promotes pH-triggered docking of TATA oligomers to TATC-TATB receptor complex, inducing a conformational switch of TATA that results in activation of the translocase. TATA dissociates from TATC-TATB upon completion of translocation.
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation (By similarity).
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.
messages: chloroplast thylakoid membrane

3702:AT4G22220
gene id: 3702:AT4G22220
uniprot id: A0A178UZH3
uniprot id: O49627
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the NifU family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Component of the core Fe-S cluster (ISC) assembly machinery (By similarity). Interacts with HSCB (PubMed:19865480).
messages: Expressed in roots, stems, leaves, flowers, pollen and siliques.
messages: Mitochondrion matrix
messages: Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (PubMed:15507320, PubMed:17417719). First, a [2Fe-2S] cluster is transiently assembled on the scaffold protein ISCU (ISU1, ISU2 or ISU3). In a second step, the cluster is released from ISCU, transferred to a glutaredoxin, followed by the formation of mitochondrial [2Fe-2S] proteins, the synthesis of [4Fe-4S] clusters and their target-specific insertion into the recipient apoproteins. Cluster assembly on ISCU depends on the function of the cysteine desulfurase complex NFS1-ISD11, which serves as the sulfur donor for cluster synthesis, the iron-binding protein frataxin as the putative iron donor, and the electron transfer chain comprised of ferredoxin reductase and ferredoxin, which receive their electrons from NADH (By similarity).
messages: Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: cytosol

3702:AT3G57130
gene id: 3702:AT3G57130
uniprot id: Q9M1I7
names: Developmental Stage
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Cytoplasm
messages: Defects in rosette leaf development. bop1 and bop2 double mutant displays leafy petioles, loss of floral organ abscission, and asymmetric flowers subtended by a bract.
messages: Homodimer or heterodimer with BOP2. Interacts with PAN.
messages: Initially detectable in embryos with a localization to the base of the developing cotyledons near the SAM. Expressed during vegetative development in young leaf primordia and at the base of the rosette leaves on the adaxial side. Expressed during reproductive development in young floral buds, and at the base of the sepals and petals.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Acts redundantly with BOP2. BOP1/2 promote leaf and floral meristem fate and determinacy in a pathway targeting AP1 and AGL24. BOP1/2 act as transcriptional co-regulators through direct interaction with TGA factors, including PAN, a direct regulator of AP1. Controls lateral organ fate through positive regulation of adaxial-abaxial polarity genes ATHB-14/PHB, YAB1/FIL and YAB3, and through positive regulation of LOB domain-containing genes LOB, LBD6/AS2 and LBD36. Promotes and maintains a developmentally determinate state in leaf cells through the negative regulation of JAG, JGL and class I KNOX genes. Is also involved in nectary development, formation of normal abscission zones and suppression of bract formation.
messages: Nucleus
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT4G18990
gene id: 3702:AT4G18990
uniprot id: A0A178V5N3
uniprot id: A0A1P8B8L6
uniprot id: Q8L7H3
names: Caution
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 16 family.
messages: Belongs to the glycosyl hydrolase 16 family. XTH group 3 subfamily.
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
messages: Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
messages: Contains at least one intrachain disulfide bond essential for its enzymatic activity.
messages: In contrast to group 1 and group 2 endotransglucosylase/hydrolase proteins, it may not contain the ligase activity, and may catalyze endohydrolysis xyloglucan polymers only.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: apoplast
messages: cell wall

3702:AT5G52990
gene id: 3702:AT5G52990
uniprot id: A0A654GAZ2
uniprot id: Q9LVV3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the synaptobrevin family.
messages: Membrane
messages: Non-SNARE longin protein involved in membrane-trafficking machinery.

3702:AT1G63360
gene id: 3702:AT1G63360
uniprot id: Q9SH22
names: Domain
names: Function
names: Similarity
messages: Belongs to the disease resistance NB-LRR family.
messages: Probable disease resistance protein.
messages: The LRR repeats probably act as specificity determinant of pathogen recognition.

3702:AT1G30440
gene id: 3702:AT1G30440
uniprot id: A0A178WNN1
uniprot id: Q9S9Q9
names: Caution
names: Domain
names: Function
names: Similarity
messages: Belongs to the NPH3 family.
messages: It is uncertain whether Met-1 or Met-4 is the initiator.
messages: May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
messages: The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

3702:AT2G32960
gene id: 3702:AT2G32960
uniprot id: A0A654EZQ4
uniprot id: Q84MD6
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the protein-tyrosine phosphatase family.
messages: Expressed in roots, leaves, stems, flowers and siliques.
messages: Possesses phosphotyrosine phosphatase activity in vitro (PubMed:21409566). Hydrolyzes para-nitrophenyl phosphate in vitro (PubMed:17976645, PubMed:21409566). Hydrolyzes O-methylfluorescein phosphate in vitro. Dephosphorylates the phosphoinositides PI(3,5)P2 (PubMed:21409566).

3702:AT5G08335
gene id: 3702:AT5G08335
uniprot id: A0A178UID5
uniprot id: Q93W54
names: Activity Regulation
names: Caution
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family.
messages: Catalyzes the post-translational methylation of isoprenylated C-terminal cysteine residues, resulting in the modulation of the function of prenylated proteins. Involved in negative regulation of abscisic acid signaling. Carboxyl methylation is a reversible and potentially regulated step in the post-translational modification of prenylated proteins.
messages: Divalent metal cations. Probably Zn(2+).
messages: Endoplasmic reticulum membrane
messages: Expressed in flowers, stems, leaves, roots and siliques. Detected in apices and vascular tissues of leaves and roots, in the stigma and in the filaments and anthers of stamen. Not found in petioles or hypocotyls.
messages: ICMTB is more widely expressed and has a higher catalytic activity than ICMTA.
messages: Inhibited by farnesylthioacetic acid (FTAA) and N-acetyl-S-trans, trans-farnesyl-l-cysteine (AFC).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Not induced by abscisic acid or auxin.
messages: Plants lacking ICMTA and ICMTB have altered phyllotaxis, fasciated stems and development of axillary flowers.

3702:AT2G28870
gene id: 3702:AT2G28870
uniprot id: Q9ZV27
names: Function
messages: Probable cyclin-dependent protein kinase (CDK) inhibitor that functions as a repressor of mitosis in the endoreduplication cell cycle.

3702:AT5G04290
gene id: 3702:AT5G04290
uniprot id: F4JW79
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Decrease in the accumulation of several 24-nt RNAs (PubMed:19343051). Reduced DNA methylation and released silencing of RNA-directed DNA methylation (RdDM) target loci promoters (e.g. LTI78/RD29A, YKT61/AtGP1 and AtMU1) without abolishing the siRNA triggers (PubMed:19410546, PubMed:19343051, PubMed:21738482). Suppression of gene silencing mediated by ROS1 disruption in the double mutants ros1 rdm3-1, ros1 rdm3-2 and ros1 rdm3-3 (PubMed:19410546). Loss in non-CG methylation at DRM2-dependent sites (PubMed:21150311). Reduced H3K9me2 at IGN5 and IGN26 loci (PubMed:21738482).
messages: Effector of RNA-directed DNA methylation (RdDM) triggered by small interfering RNAs (siRNAs, 24-nt RNAs). Functions as an adapter protein that binds scaffold transcripts generated by polymerase V and recruits AGO4 and AGO4-bound siRNAs to form an RdDM effector complex (PubMed:19410546, PubMed:19343051). Promotes the expression of 24-nt RNAs (PubMed:19343051). Required for the initial establishment of DNA methylation (PubMed:21150311). Together with AGO4, required for transcriptional gene silencing (TGS) by DNA methylation and repressive histone modifications (H3K9me2) of several chromatin loci (PubMed:21738482).
messages: Interacts with AGO4 via its C-terminal region and with RNA transcripts (PubMed:19410546, PubMed:19343051). Binds chromatin at loci subject to transcriptional silencing downstream of RNA Polymerase V, but independently from the presence of 24-nt siRNA (PubMed:21738482).
messages: Nucleus
messages: nucleoplasm

3702:AT1G57980
gene id: 3702:AT1G57980
uniprot id: Q9C654
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine permeases (TC 2.A.7.14) family.
messages: Membrane

3702:AT1G07030
gene id: 3702:AT1G07030
uniprot id: A0A178WNE7
uniprot id: Q8L6Z2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3702:AT1G61720
gene id: 3702:AT1G61720
uniprot id: Q9SEV0
names: Activity Regulation
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.
messages: Flowers and young siliques. Detected specifically in the endothelium of seed coat.
messages: From fertilization until pre-globular embryo stage.
messages: Homo- or heterodimer.
messages: Inhibited by (+)-catechin, quercetin and (+)- and (-)-dihydroquercetin. Not inhibited by salt. Positive cooperativity with NADPH acting as cosubstrate and modulator.
messages: Involved in the biosynthesis of condensed tannins. Converts cyanidin into (-)-epicatechin as the major product.
messages: Regulated by TRANSPARENT TESTA 2, TRANSPARENT TESTA 8 and TRANSPARENT TESTA GLABRA 1.

3702:AT5G38830
gene id: 3702:AT5G38830
uniprot id: A0A654G681
uniprot id: B3LFA4
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: cytosol

3702:AT2G27230
gene id: 3702:AT2G27230
uniprot id: A0A178VXD3
uniprot id: Q9XIN0
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the bHLH protein family. LHW subfamily.
messages: Expressed in both root and shoot meristems. Present in root tips.
messages: Homodimer. Can also interact with bHLH proteins.
messages: Loss of bilateral symmetry and reduced number of cells in the center of the root, resulting in roots with only single xylem and phloem poles and defect in lateral root formation.
messages: Nucleus
messages: Transcription activator that regulates root development; promotes the production of stele cells in roots. Coordinately controls the number of all vascular cell types by regulating the size of the pool of cells from which they arise.

3702:AT4G34370
gene id: 3702:AT4G34370
uniprot id: A0A178V3V2
uniprot id: Q949V6
names: Caution
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the RBR family. Ariadne subfamily.
messages: Binds 4 Zn(2+) ions per subunit.
messages: Lacks the His residue in the RING-type domain 2 that is one of the conserved features of the family.
messages: Members of the RBR family are atypical E3 ligases. They interact with the E2 conjugating enzyme UBE2L3 and function like HECT-type E3 enzymes: they bind E2s via the first RING-type zinc finger, but require an obligate trans-thiolation step during the ubiquitin transfer, requiring a conserved active site Cys residue in the second RING-type zinc finger. The active site probably forms a thioester intermediate with ubiquitin taken from the active-site cysteine of the E2 before ultimately transferring it to a Lys residue on the substrate.
messages: Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Ubiquitous.

3702:AT5G39890
gene id: 3702:AT5G39890
uniprot id: A0A1P8BCH5
uniprot id: A0A654G6G3
uniprot id: Q8LGJ5
names: Cofactor
names: Developmental Stage
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine dioxygenase family.
messages: Binds 1 Fe(2+) cation per subunit.
messages: Catalyzes the oxidation of N-terminal cysteine residues (N-Cys), thus preparing the protein for N-end rule pathway-mediated proteasomal degradation, upstream of the N-end rule enzymes ATE1, ATE2 and PRT6 (PubMed:24599061, PubMed:29848548, PubMed:33207269). Controls the preparation of the group VII ethylene response factor (ERF-VII) proteins for degradation via the 26S proteasome N-end rule pathway (PubMed:24599061, PubMed:29848548, PubMed:33207269). Acts as an oxygen sensor that controls the stability of ERF-VII proteins, which are stabilized in flooding-induced hypoxia, and regulate transcriptional adaptation to these adverse conditions (Probable) (PubMed:29848548). Not active on Cys located inside or at the C-terminus of a peptide (PubMed:24599061). Acts redundantly with PCO1 to repress the anaerobic response (PubMed:24599061).
messages: Cytoplasm
messages: Expressed throughout development, with the highest expression in mature siliques and during seed germination.
messages: Nucleus
messages: Up-regulated by hypoxia (PubMed:20097791). Up-regulated by the ERF-VII transcription factor RAP2-12 during hypoxia.

3702:AT2G07565
gene id: 3702:AT2G07565
uniprot id: A0A1P8B0A1
names: Subcellular Location Annotation
messages: Membrane

3702:AT1G11840
gene id: 3702:AT1G11840
uniprot id: A0A178W7B0
uniprot id: O65398
names: Caution
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the glyoxalase I family.
messages: Binds 1 zinc ion per subunit. In the homodimer, two zinc ions are bound between subunits.
messages: Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
messages: Homodimer.
messages: Phosphorylated by SnRK2.8.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G63800
gene id: 3702:AT5G63800
uniprot id: A0A178URV0
uniprot id: Q9FFN4
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Expressed at low levels in siliques.
messages: apoplast

3702:AT5G56970
gene id: 3702:AT5G56970
uniprot id: A0A1P8BER3
uniprot id: B3DNN3
uniprot id: Q9LTS3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.
messages: Endoplasmic reticulum
messages: Regulated by GATA18/HAN.
messages: Vacuole
messages: Very weak expression in the young shoot tissues around two weeks after germination (PubMed:14555694). Present in the center of the floral meristem and the boundary between long stamen primordia and gynoecial primordia (PubMed:26390296).

3702:AT5G61640
gene id: 3702:AT5G61640
uniprot id: A0A1P8BF28
uniprot id: Q9FKF7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MsrA Met sulfoxide reductase family.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRA family specifically reduces the MetSO S-enantiomer (By similarity).
messages: cytosol

3702:AT1G35540
gene id: 3702:AT1G35540
uniprot id: Q9LQE8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression.
messages: Belongs to the ARF family.
messages: Homodimers and heterodimers.
messages: Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.
messages: Nucleus

3702:AT1G51510
gene id: 3702:AT1G51510
uniprot id: A0A178WGD6
uniprot id: F4I9J7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the RBM8A family.
messages: Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). The MAGO-Y14 heterodimer inhibits the ATPase activity of EIF4A3, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The MAGO-Y14 heterodimer interacts with the EJC key regulator PYM leading to EJC disassembly in the cytoplasm (By similarity). Can increase in vitro the expression from reporter constructs that contain leader introns required for the expression of different genes. In association with MAGO and PYM, participates in intron-mediated enhancement of gene expression (PubMed:21676911). The MAGO-Y14 heterodimer works synergistically with the NMD pathway to regulate male gametophyte development (PubMed:26867216).
messages: Cytoplasm
messages: Expressed in root and shoot meristems, cotyledons, vascular tissues of leaves, receptacle of flowers and siliques, and pollen grains.
messages: Heterodimer with MAGO (PubMed:24416299, PubMed:19435936, PubMed:26867216). Part of the mRNA splicing-dependent exon junction complex (EJC); the core complex contains MLN51/CASC3, EIF4A3, MAGO and Y14 (Probable). Interacts with PYM (PubMed:16953428, PubMed:21676911). The interaction with PYM is direct and dissociates the EJC from spliced mRNAs (Probable). Weekly interacts with EIF4A3 (PubMed:19435936).
messages: Nucleus speckle
messages: nucleolus

3702:AT1G72110
gene id: 3702:AT1G72110
uniprot id: F4IBP0
uniprot id: Q9C7H4
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity).
messages: Cell membrane
messages: Endoplasmic reticulum membrane
messages: In the N-terminal section; belongs to the long-chain O-acyltransferase family.
messages: Membrane
messages: Mostly expressed in flowers and siliques and barely in roots and stems.
messages: Up-regulated in the stem epidermis during active wax synthesis.

3702:AT1G68610
gene id: 3702:AT1G68610
uniprot id: Q9SX24
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in heavy metals transport.
messages: Membrane

3702:AT1G13870
gene id: 3702:AT1G13870
uniprot id: Q9LMH0
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the KTI12 family.
messages: Cytoplasm
messages: Defective organ formation due to disorganized shoot, inflorescence, flower, and root meristems leading to stunted roots, few root hairs, lanceolate leaves, and a highly enlarged, disorganized shoot apex that does not produce an inflorescence (PubMed:12615938, PubMed:8392411, PubMed:10353913, PubMed:11589569, PubMed:15894610, PubMed:25518926). Altered cell division and cell differentiation in leaves (PubMed:25518926). No detectable 5-carbamoylmethyluridine (ncm5U) modified nucleosides (PubMed:20836892).
messages: Detected in globular-, heart-, and torpedo-stage embryos, in the outer integuments of ovules and in the funiculi. Also expressed in the peripheral zone of the shoot apical meristem (SAM) corresponding to the central zone. In elongating tissues, restricted at the periphery of the vascular bundle. In shoot and inflorescence apices, mostly present in the L2 layer, and, at lower levels, in the L1 layer, but absent of the L3 layer. In young leaf primordia, localized in the basal part of the dorsal side. In older leaf primordia, detected in vascular bundles and in the mesophyll between the vascular bundles. In expanding leaves, confined to stomatal guard cells, and individual palisade and spongy mesophyll parenchyma cells. In general, present around the vascular bundles. Expressed in young flower organs but not in mature sepals and petals. Gradient accumulation in the stamens and carpels, with the highest activity at the tip of the organs. Present in the meristematic and elongation zones of the primary root and in the vascular bundle of the differentiation zone.
messages: Elongator complex-associated factor that is not a structural subunit but rather transiently contacts the complex (PubMed:25518926). Regulates both meristem activity and organ growth; acts as a positive regulator of adaxial leaf patterning by modulating both cell division and differentiation (PubMed:12615938, PubMed:8392411, PubMed:11589569, PubMed:15894610, PubMed:25518926). Required for an early step in synthesis of 5-carbamoylmethyl (ncm5) groups present on uridines (ncm5U) at the wobble position in tRNA (PubMed:20836892).
messages: Expressed in roots, hypocotyls, cotyledons, shoot apices, stems, inflorescence apices, leaves and flowers.
messages: Interacts with the elongator complex (By similarity). Binds to calmodulin in a calcium-dependent manner (PubMed:12615938).
messages: Nucleus

3702:AT1G11290
gene id: 3702:AT1G11290
uniprot id: A0A178WFR8
uniprot id: Q3E6Q1
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. PCMP-H subfamily.
messages: Impaired chloroplastic NAD(P)H dehydrogenase (NDH) activity.
messages: Involved in multiple sites RNA editing events in chloroplasts. Involved in the editing of the site 7 of ndhB (ndhB-7) and site 5 of ndhD (ndhD-5) transcripts, which are two plastid-encoded subunits of the chloroplast NAD(P)H dehydrogenase (NDH) complex. Involved in the editing of the site 3 of rpoB (rpoB-3) transcript. Required for the activity of the NDH complex of the photosynthetic electron transport chain. Possesses low endoribonuclease activity in vitro.
messages: The DYW motif is dispensable for editing activity in vivo.
messages: chloroplast

3702:AT5G19360
gene id: 3702:AT5G19360
uniprot id: Q3E9C0
names: Activity Regulation
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by calcium. Autophosphorylation may play an important role in the regulation of the kinase activity (By similarity).
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
messages: May play a role in signal transduction pathways that involve calcium as a second messenger.
messages: Membrane
messages: There are 3 contiguous domains conserved in the CDPK subfamily: a kinase domain, an autoinhibitory (junction) domain and a calmodulin-like domain. The autoinhibitory domain (332-362) inactivates kinase activity under calcium-free conditions (By similarity).

3702:AT5G45330
gene id: 3702:AT5G45330
uniprot id: Q9FH77
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As a component of the decapping complex, involved in the degradation of mRNAs. Promotes P-body formation. Translational repressor (By similarity).
messages: Belongs to the LSM14 family.
messages: Homodimer. Component of the decapping complex (By similarity).
messages: P-body

3702:AT1G54170
gene id: 3702:AT1G54170
uniprot id: Q8L793
names: Domain
messages: Contains a tandem repeat of a PAM2-like motif, which seems to be involved in the binding to the PABC/CTC domain of PAB proteins.

3702:AT5G65080
gene id: 3702:AT5G65080
uniprot id: A0A1P8BAY7
uniprot id: A0A2H1ZE96
uniprot id: Q683D7
names: Function
names: Induction
names: Subcellular Location Annotation
messages: Nucleus
messages: Transcription factor involved in the negative regulation of flowering time in short days, probably through the photoperiodic and vernalization pathways. Prevents premature flowering, particularly in the cv. Landsberg erecta background. In non-inductive photoperiods (e.g. short days), required for flowering through VIL2-mediated maintenance of the epigenetically repressed state of MAF5 via H3K9me2 and plant homeodomain / polycomb repressive complex 2 (PHD-PRC2)-dependent H3K27me3.
messages: Up-regulated by vernalization. Repressed by VIL2, AGL6, CLF, EMF2 and FIE via epigenetic chromatin H3K27me3 and H3K9me2 regulation during the vegetative development.

3702:AT2G38610
gene id: 3702:AT2G38610
uniprot id: Q9ZVI3
names: Subcellular Location Annotation
messages: Nucleus

3702:AT5G62630
gene id: 3702:AT5G62630
uniprot id: Q94F08
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PQQ oxidoreductase GdhB family.
messages: Cell membrane

3702:AT3G60320
gene id: 3702:AT3G60320
uniprot id: Q93YU8
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Highest expression levels in leaves and roots, and lowest in flowers and siliques. Also expressed in stems and seedlings. Also expressed in stromata. In flowers, expressed in the pistil, junction of filament and anther, and vascular tissue of sepals and petals. In roots, expressed in stelar cells including the pericycle, phloem and parenchyma cells. In leaves, expressed in bundle sheath, phloem and parenchyma cells of the vascular tissue.
messages: Interacts with NLP7.
messages: Nucleus
messages: Required for nitrate signaling. Regulates expression of the nitrate-responsive genes NIA1, NIR1, NRT2.1 and NPF6.3/NRT1.1.
messages: Under high nitrate concentration, seedlings are slightly smaller and display later flowering than wild-type. Under low nitrate concentration, seedlings appear normal. Nitrate accumulation of the seedlings and roots is significantly lower than in wild-type, however no difference of nitrate accumulation in leaves. Nitrate content differences in roots and leaves may be due to the reduced expression of NPF6.3/NRT1.1 in roots and the increased expression of NPF7.2/NRT1.8 in leaves. After nitrate treatment, altered expression of many genes involved in nitrogen-related clusters including nitrate transport and response to nitrate.

3702:AT3G17465
gene id: 3702:AT3G17465
uniprot id: Q9LRN8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL3 family.
messages: Mitochondrion
messages: One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit.

3702:AT2G16595
gene id: 3702:AT2G16595
uniprot id: A0A178VWV9
uniprot id: Q6AWS7
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP-alpha family.
messages: Endoplasmic reticulum membrane
messages: Heterotetramer of TRAP-alpha, TRAP-beta, TRAP-delta and TRAP-gamma.
messages: Membrane
messages: Shows a remarkable charge distribution with the N-terminus being highly negatively charged, and the cytoplasmic C-terminus positively charged.
messages: TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. May be involved in the recycling of the translocation apparatus after completion of the translocation process or may function as a membrane-bound chaperone facilitating folding of translocated proteins.

3702:AT5G61330
gene id: 3702:AT5G61330
uniprot id: A0A1P8BD18
uniprot id: A0A654GD02
uniprot id: Q9FLK0
names: Similarity
messages: Belongs to the AATF family.

3702:AT1G18280
gene id: 3702:AT1G18280
uniprot id: A0A178WKI3
uniprot id: Q9LE56
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the plant LTP family.
messages: Cell membrane
messages: Inability to limit tetrazolium salt uptake in seeds, development of hair-like structures on seeds, altered pollen morphologies, deformed or collapsed, and decreased levels of omega-hydroxy fatty acids in seed coats.
messages: Lipid transfer protein involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition.
messages: Membrane
messages: Restricted to stamen, pollen and sporophytic tissues (PubMed:14671020, PubMed:24460633). Also detected, at low levels, in stems and leaves (PubMed:14671020).

3702:AT4G19900
gene id: 3702:AT4G19900
uniprot id: P0C8Q4
names: Sequence Caution
messages: Sequencing errors.

3702:AT3G14210
gene id: 3702:AT3G14210
uniprot id: A0A1I9LQL1
uniprot id: Q9LJG3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: ESM1 is highly expressed in cv. Columbia while lowly expressed in cv. Landsberg erecta.
messages: In cv. Columbia, altered ratio of endogenous nitrile to isothiocyanate hydrolysis products.
messages: Represses or inhibits nitriles production from methionine-derived and from indol-3-ylmethyl glucosinolates. Favors isothiocyanate production.
messages: Secreted

3702:AT4G00120
gene id: 3702:AT4G00120
uniprot id: O81313
names: Function
names: Induction
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: After fertilization, it is expressed in stripes about four cells wide at the margins of developing wild-type fruit. Also expressed in the inner valve layer, which becomes lignified later in fruit development. Detected in roots.
messages: By FUL, which restrict its expression to the margins.
messages: Homodimer (Probable). Heterodimer; possibly with ALC.
messages: Nucleus
messages: Transcription regulator required for seed dispersal. Involved in the differentiation of all three cell types required for fruit dehiscence. Acts as the key regulator in a network including SHP and ALC that controls specification of the valve margin. Works with ALC, SHP, and FUL to allow differentiation of the lignified valve layer, the spring-loaded mechanism of fruit that promotes opening. Regulates the expression of the YJ80 marker.

3702:AT1G16080
gene id: 3702:AT1G16080
uniprot id: A0A178WL48
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G26160
gene id: 3702:AT5G26160
uniprot id: Q7Y219
names: Function
messages: Seems not necessary for chloroplast and nuclear photorelocation movements.

3702:AT2G45170
gene id: 3702:AT2G45170
uniprot id: A0A178VZA0
uniprot id: Q8S926
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the ATG8 family.
messages: Constitutively expressed.
messages: Interacts with ATG4 (By similarity). Interacts with SH3P2 (PubMed:24249832). Interacts with ATG1A and ATG11. Binds to ATG1A and ATG11 on autophagic vesicles (PubMed:24563201).
messages: The C-terminal 4 residues are removed by ATG4 to expose Gly-118 at the C-terminus. This Gly-118 forms then a thioester bond with the 'Cys-558' of ATG7 (E1-like activating enzyme) before being transferred to the 'Cys-258' of ATG3 (the specific E2 conjugating enzyme), in order to be finally amidated with phosphatidylethanolamine. This lipid modification anchors ATG8 to autophagosomes.
messages: Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
messages: Vacuole membrane
messages: autophagosome membrane
messages: cytoskeleton

3702:AT3G50170
gene id: 3702:AT3G50170
uniprot id: A0A384LJ45
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT5G13000
gene id: 3702:AT5G13000
uniprot id: A0A5S9Y413
uniprot id: F4K116
uniprot id: Q9LXT9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 48 family.
messages: Cell membrane
messages: Involved in callose synthesis at the forming cell plate during cytokinesis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals (By similarity).
messages: Membrane

3702:AT1G70750
gene id: 3702:AT1G70750
uniprot id: Q9CAC4
names: Disruption Phenotype
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Endomembrane system
messages: Expressed in leaf epidermal cells, roots and root hairs.
messages: Interacts with myosin XI-K and XI-1.
messages: Membrane-anchored myosin receptors that define a distinct, plant-specific transport vesicle compartment.
messages: No visible phenotype. Myob1 and myob2 double mutant has no visible phenotype, but a delayed flowering. Myob1, myob2 and myob3 triple mutant has a significant height reduction and a delayed flowering. Myob1, myob2, myob3 and myob4 quadruple mutant has a significant height reduction, a reduced rosette diameter and a delayed flowering.
messages: The GTD-binding domain is sufficient for myosin binding.

3702:AT5G05070
gene id: 3702:AT5G05070
uniprot id: Q5PNZ1
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the DHHC palmitoyltransferase family.
messages: Cytoplasmic vesicle membrane
messages: Endoplasmic reticulum membrane
messages: Expressed in flowers and pollen.
messages: Palmitoyl acyltransferase.
messages: The DHHC domain is required for palmitoyltransferase activity.

3702:AT2G28470
gene id: 3702:AT2G28470
uniprot id: A0A1P8AZB4
uniprot id: F4IIQ3
uniprot id: Q9SCV4
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 35 family.
messages: Expressed in roots, flowers and siliques.
messages: apoplast

3702:AT2G26580
gene id: 3702:AT2G26580
uniprot id: A0A178VPK4
uniprot id: Q8GW46
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the YABBY family.
messages: Binds to LUG and LUH; these complexes promote adaxial cell identity in leaves as well as embryonic shoot apical meristem (SAM) initiation and postembryonic SAM maintenance. Interacts with SPL/NZZ and SPEAR2 (PubMed:25527103).
messages: Leaves polarity and growth defects.
messages: Nucleus
messages: Promotes adaxial cell identity. Regulates the initiation of embryonic shoot apical meristem (SAM) development.

3702:AT5G55670
gene id: 3702:AT5G55670
uniprot id: A0A654GBI9
uniprot id: F4K4Y6
uniprot id: Q9FM71
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRM CPSF6/7 family.
messages: Nucleus

3702:AT5G61320
gene id: 3702:AT5G61320
uniprot id: A0A654GD93
uniprot id: F4K231
names: Similarity
messages: Belongs to the cytochrome P450 family.

3702:AT5G58350
gene id: 3702:AT5G58350
uniprot id: Q9LVL5
names: Caution
names: Function
names: Induction
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. WNK subfamily.
messages: Expressed with a circadian rhythm showing a peak before dawn.
messages: May regulate flowering time by modulating the photoperiod pathway.
messages: Was named WNK/'with no lysine(K)' because key residues for catalysis, including the lysine involved in ATP binding, are either not conserved or differ compared to the residues described in other kinase family proteins.

3702:AT3G29100
gene id: 3702:AT3G29100
uniprot id: A0A654FD37
uniprot id: A1A6H8
uniprot id: Q9LVP9
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Abnormal cell wall organization in root hair and root epidermal cells, probably due to altered endosomal trafficking, and leading to short and branched root hairs (PubMed:24737717). Mislocalization of SYP41 in root hair cells (PubMed:24737717).
messages: Belongs to the VTI1 family.
messages: Early endosome membrane
messages: Endosome membrane
messages: Expressed at low levels in roots, stems, flowers and leaves.
messages: Forms SNARE complexes with t-SNAREs.
messages: May be due to a competing acceptor splice site.
messages: May function as a v-SNARE responsible for targeting vesicles involved in the secretory pathway (By similarity). Involved in actin-dependent endosomal trafficking pathways associated with the vacuole within root hairs and root tip epidermal cells (PubMed:24737717). Essential for cell wall organization and polarized root hair growth (PubMed:24737717). Also required for the localization of SYP41 to the trans-Golgi network in root hair cells (PubMed:24737717).
messages: Membrane
messages: Prevacuolar compartment membrane
messages: Vacuole membrane

3702:ArthCp050
gene id: 3702:ArthCp050
uniprot id: A0A1B1W4X1
uniprot id: P61839
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsbT family.
messages: Seems to play a role in the dimerization of PSII.
messages: chloroplast thylakoid membrane

3702:AT1G20550
gene id: 3702:AT1G20550
uniprot id: A0A5S9VC96
uniprot id: F4HSU3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase GT106 family.
messages: Membrane

3702:AT5G09760
gene id: 3702:AT5G09760
uniprot id: A0A178UA07
uniprot id: A0A384LNC5
uniprot id: A0A7G2F702
uniprot id: Q9LXD9
names: Developmental Stage
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in siliques.
messages: Expressed throughout silique development.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.
messages: cell wall

3702:AT1G01620
gene id: 3702:AT1G01620
uniprot id: A0A178WIA6
uniprot id: A8MSF6
uniprot id: Q08733
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family. PIP (TC 1.A.8.11) subfamily.
messages: Cell membrane
messages: Expressed in roots, above ground, ripening fruit, flower buds, green siliques and senescing leaves.
messages: Membrane
messages: The Asn-Pro-Ala (NPA) motifs may contribute to the formation of two hemipores that could generate a narrow channel.
messages: Water channel required to facilitate the transport of water across cell membrane. Its function is impaired by Hg(2+).

3702:AT2G26450
gene id: 3702:AT2G26450
uniprot id: Q7Y201
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Acts in the modification of cell walls via demethylesterification of cell wall pectin.
messages: Expressed in flower buds.
messages: In the C-terminal section; belongs to the pectinesterase family.
messages: In the N-terminal section; belongs to the PMEI family.
messages: Membrane
messages: The PMEI region may act as an autoinhibitory domain and prevent untimely PME activity during transport.

3702:AT5G57250
gene id: 3702:AT5G57250
uniprot id: A0A178UBB2
uniprot id: Q9LVD3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PPR family. P subfamily.
messages: Mitochondrion
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G15430
gene id: 3702:AT4G15430
uniprot id: A0A097NUP1
uniprot id: A0A384KBH1
uniprot id: Q8VZM5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as an osmosensitive calcium-permeable cation channel.
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Membrane

3702:AT1G03470
gene id: 3702:AT1G03470
uniprot id: Q66GR8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NET family.
messages: Nucleus membrane
messages: Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex.
messages: The NAB domain, also called NAB (NET actin-binding) domain, is sufficient for F-actin binding.
messages: cytoskeleton

3702:AT2G45980
gene id: 3702:AT2G45980
uniprot id: O82775
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
messages: By salt stress.
messages: Endoplasmic reticulum membrane
messages: Interacts with ATG8F (PubMed:22253227, PubMed:22580699). Interacts with ATG8H (PubMed:22580699). Interacts with APE1 and PSBS/NPQ4 (PubMed:25281689).
messages: Involved in a special stress-induced plastid-to-vacuole protein trafficking pathway. Interacts with ATG8F in plastid bodies to subsequently enable their delivery to the vacuole by an autophagic pathway. Interacts with the plastid proteins APE1 and PSBS/NPQ4 and may recruit them as cargo into plastid bodies that may be recognized by the autophagy machinery for degradation in the vacuole. Involved in the alleviation of damage caused by salt stress during plant development, probably through its involvement in plastid-to-vacuole and ER-to-vacuole trafficking (PubMed:25281689). Plays a role in seed germination in response to exogenous abscisic acid (ABA) treatment (PubMed:22253227).
messages: Membrane
messages: Plants over-expressing ATI1 display increased ability of seed germination in presence of exogenous abscisic acid (ABA). Plants silencing ATI1 and ATI2 display decreased ability of seed germination in presence of exogenous ABA.
messages: chloroplast membrane

3702:AT5G59030
gene id: 3702:AT5G59030
uniprot id: A0A654GCD4
uniprot id: Q39065
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.
messages: Copper transporter involved in copper acquisition and transport in leaves. Required for copper homeostasis and normal plant growth and development.
messages: Down-regulated by treatment with high concentrations of copper.
messages: Expressed in the root apex, lateral root primordia, embryo, trichomes, guard cells and pollen grains.
messages: Increased root length and pollen development defects.
messages: Membrane
messages: The increased root length and pollen development defects phenotypes of the mutants are completely and specifically reversed by copper addition.

3702:AT3G57750
gene id: 3702:AT3G57750
uniprot id: Q8LGB6
names: Disruption Phenotype
names: Domain
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. ZRK subfamily.
messages: Cell membrane
messages: Expressed in seedlings, young leaves, floral organs, shoot apical meristems (SAM) and inflorescence stems.
messages: Induced by the elevation of ambient temperature both in the nucleus and the cytosol.
messages: Interacts with RPP13L4/ZAR1.
messages: Nucleus
messages: Reduced resistance to Pseudomonas syringae expressing HopZ1a (PubMed:26355215). The double mutant zed1-6 zrk12-1 exhibits short inflorescence stem and autoimmunity symptoms when grown at 25 degrees Celsius (PubMed:28499073).
messages: The protein kinase domain is predicted to be catalytically inactive.
messages: Together with RPP13L4/ZAR1, involved in the ambient temperature (above 22 degrees Celsius)-sensitive aerial organ development (PubMed:28499073). Together with RPP13L4/ZAR1, involved in the regulation of the ambient temperature-sensitive intersection of growth and immune response in the absence of pathogens, by repressing the transcription of SNC1 (PubMed:28499073). Probable non-functional kinase required for recognition of the Pseudomonas syringae type III effector HopZ1a by RPP13L4/ZAR1 and to trigger subsequent defense responses (PubMed:24170858, PubMed:26355215, PubMed:28652264). May. function as a decoy to trap HopZ1a in the ZAR1 complex for recognition by the plant immune system (PubMed:24170858).
messages: cytosol

3702:AT1G04010
gene id: 3702:AT1G04010
uniprot id: Q4VCM1
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AB hydrolase superfamily. Lipase family.
messages: By senescence.
messages: Early leaf senescence. Strong reduction in total sterol esters content in leaves and seeds. No change in flowers.
messages: Involved in lipid catabolism. Essential for sterol esters biosynthesis in leaves and seeds, but not in flowers. Plays a role in controlling the free sterol content of leaves. Catalyzes the transacylation of acyl groups from phospholipids to a variety of different sterols. Prefers phosphatidylethanolamine over phosphatidylcholine as an acyl donor. Not active toward neutral lipids. Highly specific for position sn-2, which in plant lipids is essentially devoid of saturated acyl groups. Broad sterol specificity (cholesterol > campesterol > sitosterol > stigmasterol), but no activity with lupeol or beta-amyrin.
messages: Microsome membrane

3702:AT5G53600
gene id: 3702:AT5G53600
uniprot id: A0A178UL68
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G52660
gene id: 3702:AT1G52660
uniprot id: Q9SSR8
names: Caution
names: Function
messages: Although strongly related to the NB-LRR family, it is shorter and lacks the LRR repeats that are present in other proteins of the family.
messages: Possible disease resistance protein.

3702:AT1G29950
gene id: 3702:AT1G29950
uniprot id: A0A7G2DWY5
uniprot id: C0Z288
uniprot id: Q9ASX9
names: Subcellular Location Annotation
names: Subunit
messages: Homodimer (Probable). Interacts with LHW.
messages: Nucleus

3702:AT5G05390
gene id: 3702:AT5G05390
uniprot id: A0A7G2F8J6
uniprot id: Q9FLB5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the multicopper oxidase family.
messages: Binds 4 Cu cations per monomer.
messages: Lignin degradation and detoxification of lignin-derived products.
messages: Predominantly expressed in the inflorescence stem.
messages: apoplast

3702:AT3G11964
gene id: 3702:AT3G11964
uniprot id: F4J8K6
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Aborted development of female gametophytes.
messages: Highly expressed in flowers and at lower levels in roots, leaves, stems and siliques.
messages: Involved in the biogenesis of ribosomal RNA (rRNA). Required for the formation of 5.8S rRNA. Required for normal development of female gametophytes.
messages: nucleolus

3702:AT3G18470
gene id: 3702:AT3G18470
uniprot id: Q9LS43
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cornifelin family.
messages: May be involved in heavy metals transport.
messages: Membrane

3702:AT5G22910
gene id: 3702:AT5G22910
uniprot id: Q9FFB7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. CHX (TC 2.A.37.4) subfamily.
messages: May operate as a cation/H(+) antiporter.
messages: Membrane

3702:AT5G28050
gene id: 3702:AT5G28050
uniprot id: Q94BU8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytidine and deoxycytidylate deaminase family.
messages: Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.
messages: Cytoplasm
messages: Expressed in roots, leaves, flowers and siliques.
messages: No visible phenotyper under normal growth conditions.
messages: Nucleus

3702:AT2G24170
gene id: 3702:AT2G24170
uniprot id: A0A1P8AYX1
uniprot id: A0A654EWS8
uniprot id: Q8RWW1
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The C-terminal KXD/E motif functions as a Golgi retention signal, certainly through the binding to the COP1 coatomer.

3702:AT3G58990
gene id: 3702:AT3G58990
uniprot id: Q9LYT7
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the LeuD family.
messages: Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (Probable). Functions redundantly with LEUD1 in the methionine chain elongation pathway of aliphatic glucosinolate formation.
messages: Expressed in vascular bundles of roots, cotyledons and rosette leaves (PubMed:24608865). Expressed in stem vascular bundles which branche off into lateral inflorescences (PubMed:24608865). Expressed in connective tissues in anthers (PubMed:24608865). In hypocotyls, expressed in parenchyma cells surrounding the vasculature (PubMed:32612621). In rosette leaves, expressed in phloem cells and cells close to the xylem along the vascular bundles (PubMed:32612621). In roots of adult plants, expressed in cells closely associated with the stele (PubMed:32612621). In flowering stalks, expressed in parenchyma cells associated with the phloem or the xylem (PubMed:32612621).
messages: Heterodimer of the large LEUC/IIL1 subunit and the small LEUD (SSU1, SSU2 or SSU3) subunits.
messages: No visible phenotype under normal growth conditions.
messages: Plastid
messages: chloroplast stroma

3702:AT4G13670
gene id: 3702:AT4G13670
uniprot id: A1A6M1
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Exhibits zinc-dependent disulfide isomerase activity. Required for seedling and chloroplast development under heat stress, probably by maintaining plastid-encoded RNA polymerase (PEP)-dependent transcription.
messages: Interacts with HSP21; the formed complex associates with the plastid-encoded RNA polymerase (PEP) complex not only during transcription initiation, but also during elongation and termination, and with a stronger efficiency in illuminated chloroplasts. Binds to promoter regions of PEP-dependent genes, especially after a heat stress (PubMed:23922206). Interacts with FLN2 (PubMed:24019900).
messages: Ivory phenotype under heat stress.
messages: chloroplast nucleoid

3702:AT5G40200
gene id: 3702:AT5G40200
uniprot id: A0A654G6M5
uniprot id: Q9FL12
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the peptidase S1C family.
messages: Expressed in roots, cotyledons, rosette leaves, cauline leaves, stems, flowers and siliques.
messages: Homooctamer formed by 4 homodimers (PubMed:29180814). Interacts with ARR4 (PubMed:27274065).
messages: Induced by trans-zeatin (at protein level).
messages: Nucleus
messages: Serine protease that degrades the two-component response regulator ARR4 (PubMed:27274065, PubMed:29180814). Regulates ARR4 stability by targeting ARR4 in the nucleus for degradation. Acts upstream of ARR4 and regulates the activity of ARR4 in cytokinin and light-signaling pathways. ARR4 mediates the cross-talk between light and cytokinin signaling through modulation of the activity of phytochrome B (PubMed:27274065).

3702:AT1G69460
gene id: 3702:AT1G69460
uniprot id: A0A178WJ06
uniprot id: Q8VY92
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the EMP24/GP25L family.
messages: Endoplasmic reticulum membrane
messages: Golgi stack membrane
messages: Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side (By similarity).
messages: Membrane
messages: Probably oligomerizes with other members of the EMP24/GP25L family. Associates with the COPI vesicle coat (coatomer). Associates with the COPII vesicle coat (coatomer).
messages: The cytoplasmic C-terminal domain contains a functional dilysine-retrieval motif, which is involved in the retrograde Golgi-to-ER transport of the protein.
messages: The lumenal coiled-coil domain is required for the Golgi subcellular location.
messages: cis-Golgi network membrane

3702:AT4G18520
gene id: 3702:AT4G18520
uniprot id: Q0WNP3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Albino lethal phenotype with severe chloroplast development defects.
messages: Belongs to the PPR family. PCMP-A subfamily.
messages: Expressed specifically in aerial greening tissues, such as cotyledons, rosette leaves, cauline leaves, stems, sepals, stamens, carpels and siliques.
messages: Interacts with MORF8/RIP1, MORF2/RIP2 and MORF9/RIP9.
messages: Required for proper chloroplast development (Ref.7, PubMed:24144791). Involved in the regulation of plastid gene expression probably through regulation of plastid-encoded polymerase (PEP) dependent chloroplast transcription (PubMed:24144791). Required for RNA editing of several chloroplastic transcripts, especially accD transcripts (PubMed:24144791, PubMed:26123918). Required for processing of the chloroplastic rpoA pre-mRNA (Ref.6, Ref.7). Required for the monocistronic rpoA transcript processing from the rpl23-rpl2-rps19-rpl22-rps3-rpl16-rpl14-rps8-rpl36-rps11-rpoA polycistron. Binds the intergenic sequence of rps11-rpoA for rpoA monocistronic RNA cleavage (Ref.7).
messages: chloroplast

3702:AT5G40610
gene id: 3702:AT5G40610
uniprot id: Q9SCX9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
messages: Expressed in young seedlings, flowers and siliques. Expressed at low levels in roots.
messages: Involved in glycerolipid metabolism.
messages: chloroplast

3702:AT1G67550
gene id: 3702:AT1G67550
uniprot id: A0A5S9WQL7
uniprot id: Q9SR52
names: Activity Regulation
names: Cofactor
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Binds 2 nickel ions per subunit.
messages: Carbamylation allows a single lysine to coordinate two nickel ions.
messages: Carboxylation allows a single lysine to coordinate two nickel ions.
messages: Homohexamer. Other oligomeric forms may exist depending on pH and presence of salts.
messages: In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
messages: No visible phenotype under normal growth conditions, but mutant plants cannot grow on medium with urea as the sole source of nitrogen.
messages: Requires the three urease accessory proteins URED, UREF AND UREG for its activation.
messages: Urea hydrolase involved in nitrogen recycling from ureide, purine, and arginine catabolism.

3702:AT2G46660
gene id: 3702:AT2G46660
uniprot id: A0A654F3S3
uniprot id: Q9ZNR0
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the cytochrome P450 family.
messages: Expressed in leaves, sepals, petals, stamens, carpels and developing ovules.
messages: Membrane
messages: Plays role in seed and fruit development. Functions probably in association with CYP78A9 in the regulation of seed growth. Acts maternally to promote seed growth.
messages: Reduced seed size.
messages: The gain of function mutants eod3-1D (T-DNA tagging) show increased size of leaves, flowers and seeds, but defects in reproductive development.

3702:AT1G60500
gene id: 3702:AT1G60500
uniprot id: Q9ZP55
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
messages: Cytoplasm
messages: Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP.
messages: cytoskeleton

3702:AT1G13130
gene id: 3702:AT1G13130
uniprot id: Q66GP7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 5 (cellulase A) family.
messages: Secreted

3702:AT4G03050
gene id: 3702:AT4G03050
uniprot id: A0A5S9XPS2
uniprot id: Q9ZTA1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Tissue Specificity
messages: 2-oxoglutarate-dependent dioxygenase involved in glucosinolates biosynthesis. Catalyzes the conversion of methylsulfinylalkyl glucosinolates to hydroxyalkyl glucosinolates (By similarity).
messages: AOP1, AOP2 and AOP3 are found in tandem and inverted duplications on chromosome IV and encode 2-oxoglutarate-dependent dioxygenases involved in glucosinolates biosynthesis. In cv. Columbia, AOP2 (AC Q9ZTA2) cDNA contains a 5-bp deletion that leads to a non-functional protein and AOP3 (AC Q9ZTA1) is not expressed. The functional and expressed alleles for AOP2 (AC Q945B5) and AOP3 (AC Q945B4) are found in cv. Cvi and cv. Landsberg erecta, respectively. No ecotype coexpresses both AOP2 and AOP3 genes. The catalytic role of AOP1 is still uncertain (PubMed:11251105).
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Not expressed.

3702:AT1G73820
gene id: 3702:AT1G73820
uniprot id: A0A1P8AMK1
uniprot id: A0A654EQ79
uniprot id: Q9C9T0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SSU72 phosphatase family.
messages: Nucleus
messages: Protein phosphatase that catalyzes the dephosphorylation of the C-terminal domain of RNA polymerase II. Plays a role in RNA processing and termination.

3702:AT5G19780
gene id: 3702:AT5G19780
uniprot id: A0A178UTQ9
uniprot id: B9DHQ0
uniprot id: Q56WH1
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: There are six genes coding for alpha-tubulin. The sequences coded by genes 3 and 5 are identical.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively.
messages: cytoskeleton

3702:AT2G36895
gene id: 3702:AT2G36895
uniprot id: A0A178VQ80
names: Caution
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G23637
gene id: 3702:AT3G23637
uniprot id: A0A654FFF0
uniprot id: Q6IM80
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DVL/RTFL small polypeptides family.
messages: Cell membrane
messages: Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs and coordinating socket cell recruitment and differentiation at trichome sites.

3702:AT2G38950
gene id: 3702:AT2G38950
uniprot id: Q8L7T6
names: Caution
names: Disruption Phenotype
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the JARID1 histone demethylase family.
messages: Expressed in inflorescences, roots, siliques, leaves and stems.
messages: Lacks the 2 conserved His residues involved in iron binding and essential for dioxygenase activity. Its enzyme activity is therefore unsure.
messages: No visible phenotype under normal growth conditions.
messages: Nucleus

3702:AT3G61300
gene id: 3702:AT3G61300
uniprot id: Q9M2D4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCTP family.
messages: Membrane

3702:AT5G42850
gene id: 3702:AT5G42850
uniprot id: Q9FMN4
names: Caution
names: Function
names: Similarity
messages: Belongs to the thioredoxin family.
messages: Probable thiol-disulfide oxidoreductase that may participate in various redox reactions.
messages: The active site contains a CPDC motif wich differs from the conserved CGPC motif.

3702:AT4G09110
gene id: 3702:AT4G09110
uniprot id: A0A178V1A5
uniprot id: Q9M0R6
names: Caution
names: Domain
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RING-type zinc finger family. ATL subfamily.
messages: Membrane
messages: The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G71010
gene id: 3702:AT1G71010
uniprot id: Q9SSJ8
names: Caution
names: Function
names: Subunit
messages: Component of the PI(3,5)P2 regulatory complex at least composed of ATG18, SAC/FIG4, FAB1 and VAC14.
messages: Lacks the FYVE domain, necessary to efficiently target the protein to membranes containing the phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.
messages: The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity).

3702:AT1G07430
gene id: 3702:AT1G07430
uniprot id: Q9LNW3
names: Cofactor
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the PP2C family.
messages: Binds 2 magnesium or manganese ions per subunit.
messages: Cell membrane
messages: Cytoplasm
messages: Expressed in shoot meristem, vascular tissues of cotyledons, and in primary roots surrounding the root meristem (PubMed:22404835). Highly expressed in seeds (PubMed:23378449).
messages: Honsu means abnormal drowsiness in Korean.
messages: Induced by abscisic acid (ABA).
messages: Involved in the negative regulation of the K(+) potassium channel AKT1 by its dephosphorylation, antagonistically to CIPK proteins (e.g. CIPK23) (PubMed:17898163). Functions as positive regulator of abscisic acid-mediated cell signaling during seedling growth (PubMed:22404835). Involved in the regulation of seed dormancy (PubMed:23378449). Acts as negative regulator of seed dormancy by inhibiting abscisic signaling and subsequently activating gibberellic acid signaling (PubMed:23378449).
messages: No visible phenotype under normal growth conditions, but mutant plants exhibit reduced sensitivity to abscisic acid (ABA) and glucose during seed germination and seedling stage (PubMed:22404835). Freshly harvested seeds of mutant plants exhibit increased seed dormancy (PubMed:23378449).
messages: Nucleus
messages: Part of a K(+)-channel calcium-sensing kinase/phosphatase complex composed by a calcium sensor CBL (CBL1, CBL2, CBL3 or CBL9), a kinase CIPK (CIPK6, CIPK16 or CIPK23), a phosphatase PP2C (AIP1) and a K(+)-channel (AKT1) (PubMed:17898163). Interacts with AKT1 and CIPK23 (PubMed:17898163). Interacts with PYL8/RCAR3 in an abscisic acid-independent (PubMed:22404835). Interacts with PYR1/RCAR11 in an abscisic acid-dependent manner (PubMed:23378449).

3702:AT2G25140
gene id: 3702:AT2G25140
uniprot id: Q8VYJ7
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ClpA/ClpB family.
messages: By heat stress.
messages: Mitochondrion
messages: Molecular chaperone that does not seem to be involved in heat stress response or tolerance.
messages: No visible phenotype under normal growth conditions.

3702:AT4G20320
gene id: 3702:AT4G20320
uniprot id: A0A1P8B985
uniprot id: Q0WRY1
names: Function
names: Similarity
messages: Belongs to the CTP synthase family.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.

3702:AT1G64000
gene id: 3702:AT1G64000
uniprot id: A0A654EM87
uniprot id: Q29PS1
uniprot id: Q8VWQ4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WRKY group II-c family.
messages: Nucleus
messages: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).

3702:AT2G43550
gene id: 3702:AT2G43550
uniprot id: O22869
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DEFL family. Protease inhibitor I18 (RTI/MTI-2) subfamily.
messages: Secreted
messages: Was initially thought to be a protease inhibitor.

3702:AT1G75910
gene id: 3702:AT1G75910
uniprot id: A0A178WJM0
uniprot id: Q0WUV7
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the 'GDSL' lipolytic enzyme family.
messages: Flower buds and pollen.
messages: Reduced pollen fertility. Pollen grain exhibit a partial formation of coat and impaired water absorption and germination capacities.
messages: Required for the formation of pollen coats and male fertility.
messages: Strongly expressed in tapetal cells at the flower developmental stage 10 to middle 12, where the components of pollen coat are synthesized actively.
messages: pollen coat

3702:AT2G22920
gene id: 3702:AT2G22920
uniprot id: A0A1P8B1W3
uniprot id: F4IKI5
uniprot id: O81009
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the peptidase S10 family.
messages: Expressed in roots.
messages: May be due to a competing donor splice site.
messages: Probable carboxypeptidase.
messages: Secreted

3702:AT1G09750
gene id: 3702:AT1G09750
uniprot id: A0A178W448
uniprot id: O04496
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A1 family.
messages: apoplast

3702:AT5G20280
gene id: 3702:AT5G20280
uniprot id: A0A384KD86
uniprot id: Q94BT0
uniprot id: W8PUZ7
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: PTM
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Activity is regulated by phosphorylation and moderated by concentration of metabolites and light.
messages: Belongs to the glycosyltransferase 1 family.
messages: Circadian-regulated, with the highest expression at the end of the light period and the lowest at the end of the dark period (in 12 hours light/12 hours dark cycle). Induced by cold (at protein level).
messages: Expressed in seeds, stems, rosette leaves, flowers and siliques. Highly expressed in maturing nectaries.
messages: Homodimer or homotetramer.
messages: Loss of nectar secretion accompanied by starch accumulation in nectaries.
messages: Phosphorylated at Ser-152 upon sucrose supply.
messages: Plants silencing SPS1 show reduced shoot growth, leaf fresh weight and dry weight, and decreased leaf starch, leaf sugar levels and sucrose export rates (PubMed:10998187 and PubMed:21309792). Tobacco plants overexpressing Arabidopsis SPS1 show increased stem height and diameter, increased total dry weight and elevated concentrations of sink sucrose pools (PubMed:17415671).
messages: Plays a major role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Required for nectar secretion.
messages: Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation.

3702:AT4G05220
gene id: 3702:AT4G05220
uniprot id: A0A178V3B5
uniprot id: Q9M0X3
names: Subcellular Location Annotation
messages: Membrane

3702:AT3G55800
gene id: 3702:AT3G55800
uniprot id: P46283
names: Activity Regulation
names: Cofactor
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the FBPase class 1 family.
messages: Binds 3 Mg(2+) ions per subunit.
messages: Expressed in all tissues examined except root. Highest levels found in leaves and flowers.
messages: Homodimer.
messages: In continuous light, by inorganic phosphate, sed7P, glycerate and ribulose 1,5-bisphosphate.
messages: Light activation through pH changes, Mg(2+) levels and also by light-modulated reduction of essential disulfide groups via the ferredoxin-thioredoxin f system. In etiolated seedlings, induction occurs only after 8 hours of illumination.
messages: chloroplast

3702:AT4G38680
gene id: 3702:AT4G38680
uniprot id: Q41188
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Active in meristematic tissues. During vegetative growth, expressed in root and shoot apical regions, leaves and roots primordia, root vascular cylinder and procambium. In reproductive organs, present in developing floral meristem, meristematic tissues of young flower buds, and placentae, pollen, ovules and seeds, mostly in embryos. High expression in the earliest stage of silique development, with a decrease during the middle stages of silique development and subsequently an increase during the later stages. In mature seeds, mostly localized in hypocotyl and radicule. During seed germination, first observed in the tip of the radicule and, upon opening of the cotyledons, expressed in the radicule and hypocotyl/radicule transition zone.
messages: Belongs to the cold shock protein (CSP) family.
messages: Chaperone that binds to RNA, single- (ssDNA) and double-stranded (dsDNA) DNA, and unwinds nucleic acid duplex. Accelerates seed germination and seedling growth under cold stress, and contributes to enhancement of cold and freezing tolerance. Regulates flowering transition, and flower and seed development. Promotes seed germination under salt stress. May regulate respiratory oxygen uptake.
messages: Cytoplasm
messages: Early flowering, altered stamen number and impaired seed development.
messages: Induced by abscisic acid (ABA), transiently by ethylene, salicylic acid and water fload, but down-regulated by dehydration stress. Accumulates during cold acclimation. Accumulation during silique development is AGL15-dependent.
messages: Mostly expressed in shoot apices, seeds and siliques, and, to a lower extent, in roots, cotyledons, stems, shoots, leaves, floral buds and flowers. Present in shoot apical meristems and siliques (at protein level).
messages: nucleolus

3702:AT5G55230
gene id: 3702:AT5G55230
uniprot id: A0A178UKF6
uniprot id: F4K3E4
uniprot id: Q9FLP0
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Basal phosphorylation at all stages of the cell cycle. MT-binding properties inhibited by hyperphosphorylation mediated by CDKs and/or MAPKs (e.g. ANP2, ANP3, MPK4 and MPK6) during prometaphase and metaphase.
messages: Belongs to the MAP65/ASE1 family.
messages: Cytoplasm
messages: Expressed in all organs and tissues with the exception of sepals and anthers. Bound to subsets of microtubules in the cells of root epidermis, hypocotyl and cotyledons (at protein level).
messages: Expressed throughout the cell cycle.
messages: Forms dimer. Binds to MT, mostly with coaligned MT, both between parallel or antiparallel, forming thick bundles. Interacts with the alpha-tubulin subunit of the tubulin heterodimer. Bundles polymerized MT via the formation of 25-nm crossbridges at specific stages of the cell cycle (e.g. bundles microtubules in interphase, anaphase and telophase but does not bind microtubules in prophase or metaphase), at the plus-end, the minus-end, or along the entire length of MT, and along phragmoplast MT. Interacts with SH3P1 and MPK4.
messages: Microtubule-associated protein that bundle and stabilize adjacent microtubules (MT) of the cell cortex. Enhances MT nucleation. Can also bind to tubulin dimers and promotes their polymerization. Confers MT resistance to the drug propyzamide and cold conditions. Plays a role in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. Represses metaphase spindle organization and the transition to anaphase in dephosphorylated active form. Promotes the formation of a planar network of antiparallel microtubules. May be involved in stomatal movement modulation by regulating the dynamic and arrangement of cortical MT.
messages: Nucleus
messages: cell cortex
messages: phragmoplast
messages: spindle

3702:AT5G09250
gene id: 3702:AT5G09250
uniprot id: A0A1P8BFY1
uniprot id: A0A1P8BG06
uniprot id: A0A384LE42
uniprot id: A0A654FZZ8
uniprot id: B3H688
uniprot id: O65154
uniprot id: Q0WS63
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the transcriptional coactivator PC4 family.
messages: General coactivator that functions cooperatively with TAFs and mediates functional interactions between upstream activators and the general transcriptional machinery. Binds single-stranded DNA (By similarity).
messages: Nucleus
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT4G39780
gene id: 3702:AT4G39780
uniprot id: O65665
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AP2/ERF transcription factor family. ERF subfamily.
messages: Nucleus
messages: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).

3702:AT3G29050
gene id: 3702:AT3G29050
uniprot id: Q9LJW1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cysteine-rich repeat secretory protein family.
messages: Secreted

3702:AT4G00850
gene id: 3702:AT4G00850
uniprot id: A0A1P8B4F6
uniprot id: A0A654FKR1
uniprot id: Q93VH6
names: Function
names: Similarity
names: Subunit
names: Tissue Specificity
messages: Belongs to the SS18 family.
messages: Interacts with GRF1.
messages: Predominantly expressed in shoot tips containing the shoot apical meristem (SAM) and flower buds. Also expressed in mature flowers.
messages: Transcription coactivator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues (By similarity). Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation (By similarity). GIFs are involved in the positive regulation of cell proliferation of lateral organs in a functionally redundant manner.

3702:AT1G11250
gene id: 3702:AT1G11250
uniprot id: A0A178W554
uniprot id: Q9SXB0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the syntaxin family.
messages: Membrane
messages: Part of the t-SNARE complex.
messages: Vesicle trafficking protein that functions in the secretory pathway.

3702:AT4G32000
gene id: 3702:AT4G32000
uniprot id: A0A178UUX7
uniprot id: A0A178UUY0
uniprot id: A0A178UWA3
uniprot id: A0A1P8B5N6
uniprot id: A0A384K9M5
uniprot id: F4JTH1
uniprot id: F4JTH2
names: Caution
names: Similarity
messages: Belongs to the protein kinase superfamily.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G02420
gene id: 3702:AT3G02420
uniprot id: A0A178VC85
uniprot id: A0A384L6N9
uniprot id: A0A654F4Y8
uniprot id: Q9M898
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PER33/POM33 family.
messages: Membrane
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT1G77080
gene id: 3702:AT1G77080
uniprot id: A0A1P8ARA3
uniprot id: A0A1P8ARA9
uniprot id: A0A1P8ARE3
uniprot id: A0A654ER95
uniprot id: Q9AT76
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Expressed in most plant tissues, embryo, seedlings, roots, leaves, stems, inflorescence, pollen, siliques and flowers.
messages: Interacts with AGL39, AGL97 and AGL74.
messages: Nucleus
messages: Probable transcription factor involved in the negative regulation of flowering time in both long and short days, probably through the photoperiodic and vernalization pathways. Prevents premature flowering.
messages: Slightly repressed by vernalization. Negatively regulated at the chromatin level by VIL1 through the photoperiod and vernalization pathways. Requires EARLY FLOWERING 7 (ELF7) and ELF8 to be expressed. Up-regulated by HUA2.
messages: Suppress the late-flowering phenotype of photoperiod-pathway mutants. Affects natural variation in flowering behavior in both long and short days.
messages: The early flowering of cv. Nd-1 (especially in short days) is due to a deletion of AGL27. This deletion is associated with the QTL 'FLOWERING 1' (FLW1) (PubMed:15695584).

3702:AT5G53350
gene id: 3702:AT5G53350
uniprot id: Q9FK07
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: ATP-dependent specificity component of the mitochondrial Clp protease (PubMed:11352464). It directs the protease to specific substrates (By similarity). Can perform chaperone functions in the absence of ClpP (By similarity).
messages: Belongs to the ClpX chaperone family.
messages: Constitutively expressed in leaves, shoots, roots and flowers.
messages: Mitochondrion

3702:AT1G51470
gene id: 3702:AT1G51470
uniprot id: A0A178W999
uniprot id: Q3ECS3
names: Function
names: Miscellaneous
names: Similarity
names: Tissue Specificity
messages: Belongs to the glycosyl hydrolase 1 family.
messages: Hydrolyzes sinigrin and, with lower efficiency, p-nitrophenyl beta-D-glucoside.
messages: It seems that the absence of a catalytic proton donor in plant myrosinases is not impairing the hydrolysis of glucosinolates.
messages: Specifically expressed in roots.

3702:AT3G47570
gene id: 3702:AT3G47570
uniprot id: A0A654FFJ8
uniprot id: C0LGP4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
messages: Cell membrane

3702:AT1G11570
gene id: 3702:AT1G11570
uniprot id: A0A178W6A0
uniprot id: A0A1P8AWA6
uniprot id: F4I8X9
uniprot id: Q3E7U2
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Has a role in nuclear-cytoplasmic transport of proteins and mRNAs.
messages: Nucleus

3702:AT2G19500
gene id: 3702:AT2G19500
uniprot id: Q9FUJ3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
messages: Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.
messages: Endoplasmic reticulum
messages: Expressed in the shoot apex, in stipules, and occasionally in the most apical part of the inflorescence stems. Not detected in roots.
messages: extracellular space

3702:AT5G45860
gene id: 3702:AT5G45860
uniprot id: Q9FJ50
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PYR/PYL/RCAR abscisic acid intracellular receptor family.
messages: Cell membrane
messages: Cytoplasm
messages: Homodimer. Binds ABA on one subunit only. Interacts with PP2Cs. Binds to CARs protein in an ABA-independent manner, both at the plasma membrane and in the nucleus (By similarity). Interacts with I-2 and TOPP1 (PubMed:26943172).
messages: Nucleus
messages: Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA (By similarity). Suppresses the phosphatase activity of TOPP1 in a dose-dependent manner in vitro (PubMed:26943172).
messages: Upon interaction with ABA, the 'latch' and 'gate' loops change in conformation leading to a tight dimerization and the creation a surface that enables the receptor to dock into and inhibit the PP2C active site.

3702:AT1G32490
gene id: 3702:AT1G32490
uniprot id: A0A178W3A5
uniprot id: Q8VY00
names: Caution
names: Disruption Phenotype
names: Function
names: Similarity
names: Tissue Specificity
messages: Belongs to the DEAD box helicase family. DEAH subfamily. PRP2 sub-subfamily.
messages: Embryo defective (PubMed:15266054). Reduced stature, early flowering and altered leaf morphology (PubMed:17008405).
messages: Involved in pre-mRNA splicing.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: Widely expressed.

3702:AT1G14690
gene id: 3702:AT1G14690
uniprot id: A0A178WCR3
uniprot id: Q8L836
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MAP65/ASE1 family.
messages: Cytoplasm
messages: Forms dimer. Binds to microtubules (MT) (By similarity).
messages: Nucleus
messages: spindle pole

3702:AT1G20910
gene id: 3702:AT1G20910
uniprot id: A0A178WPD8
uniprot id: C0SUW7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Nucleus

3702:AT4G29550
gene id: 3702:AT4G29550
uniprot id: Q8LFV1
names: Similarity
messages: Belongs to the UPF0725 (EMB2204) family.

3702:AT1G32480
gene id: 3702:AT1G32480
uniprot id: Q9LQK9
names: Caution
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Could be the product of a pseudogene.
messages: Lacks the isocitrate binding site which is one of the conserved features of the isocitrate dehydrogenase family.
messages: May be due to an intron retention.
messages: Performs an essential role in the oxidative function of the citric acid cycle.

3702:AT1G44575
gene id: 3702:AT1G44575
uniprot id: Q9XF91
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ELIP/psbS family.
messages: Non-photochemical quenching phenotype.
messages: Plays an important role in non-photochemical quenching, a process maintains the balance between dissipation and utilization of light energy to minimize generation of oxidizing molecules, thereby protecting the plant against photo-oxidative damage. Is not necessary for efficient light harvesting and photosynthesis.
messages: chloroplast thylakoid membrane

3702:AT4G13990
gene id: 3702:AT4G13990
uniprot id: Q84R16
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the glycosyltransferase 47 family.
messages: Expressed in roots, hypocotyls, cotyledons, leaves, stems, stamens and carpels.
messages: Functions in xyloglucan synthesis by adding side chains to the xylosylated glucan backbone. Involved in the galactosylation of hemicellulose xyloglucan.
messages: Golgi apparatus membrane

3702:AT3G47460
gene id: 3702:AT3G47460
uniprot id: A0A1I9LLC4
uniprot id: Q9SN90
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the SMC family. SMC2 subfamily.
messages: Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. Also involved in chromosome segregation in meiosis.
messages: Forms a heterodimer with SMC4. Component of the condensin complex, which contains the SMC2 and SMC4 heterodimer, and three non SMC subunits that probably regulate the complex: CAPH, CAPD2 and CAPG.
messages: Highly expressed in roots and young floral buds.
messages: Nucleus
messages: The SMC hinge domain, which separates the large intramolecular coiled coil regions, allows the heterodimerization with SMC4, forming a V-shaped heterodimer.

3702:AT2G19670
gene id: 3702:AT2G19670
uniprot id: O82210
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
messages: Cytoplasm
messages: Interacts with FIB2 and PRMT11.
messages: Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in a glycine and arginine-rich domain. Type I arginine methyltransferase active on both histones and non-histone proteins. Mediates the methylation of MED36A.
messages: Nucleus

3702:AT3G46760
gene id: 3702:AT3G46760
uniprot id: Q9STF0
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3702:AT5G15450
gene id: 3702:AT5G15450
uniprot id: A0A654G1P4
uniprot id: Q9LF37
names: Disruption Phenotype
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ClpA/ClpB family.
messages: By heat stress.
messages: Molecular chaperone essential for chloroplast development and seedling viability. Mediates internal thylakoid membrane formation and confers thermotolerance to chloroplasts during heat stress.
messages: Plants overexpressing CLPB3 show inhibition of chloroplast development and a mild pale-green phenotype.
messages: Seedling lethal when grown on soil. On agar plates supplied with sucrose, seedlings grow slowly with a chlorotic phenotype. They display irregular and small chloroplasts without starch grains in the stroma and with disorganized grana stacks and undeveloped thylakoid membranes.
messages: chloroplast

3702:AT1G51270
gene id: 3702:AT1G51270
uniprot id: A0A1P8AQB2
uniprot id: A0A1P8AQB3
uniprot id: A0A1P8AQC1
uniprot id: A0A1P8AQE6
uniprot id: A0A384KL39
uniprot id: F4I818
uniprot id: F4I820
uniprot id: Q9SYC9
names: Caution
names: Domain
names: Function
names: Similarity
messages: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17) family.
messages: May play a role in vesicle trafficking.
messages: The TIR domain mediates NAD(+) hydrolase (NADase) activity. Self-association of TIR domains is required for NADase activity.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

3702:AT3G05780
gene id: 3702:AT3G05780
uniprot id: Q9M9L8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: Homohexamer or homoheptamer. Organized in a ring with a central cavity.
messages: Mitochondrion matrix

3702:AT2G41300
gene id: 3702:AT2G41300
uniprot id: F4IJZ6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the strictosidine synthase family.
messages: Vacuole

3702:AT2G47490
gene id: 3702:AT2G47490
uniprot id: A0A5S9X7U8
uniprot id: O22261
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Appears to be a chloroplast envelope-located membrane protein lacking an N-terminal-located transit peptide.
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Highly expressed in young leaf mesophyll cells, root tips and at the branches of adventitious roots. Low expression in all flower tissues and not detected in siliques and seeds.
messages: Inhibited by pyridoxal 5'-phosphate, bathophenanthroline, tannic acid, mersalyl, mercuric chloride, p-hydroxymercuribenzoate, p-hydroxymercuribenzoate sulfonate, bromocresol purple and N-ethylmaleimide.
messages: Mediates the NAD(+) import into chloroplast. Favors the NAD(+)(in)/ADP or AMP(out) antiport exchange, but is also able to catalyze a low unidirectional transport (uniport) of NAD(+). Transports NAD(+), nicotinic acid adenine dinucleotide, nicotinamide mononucleotide, nicotinic acid mononucleotide, FAD, FMN, TTP, TDP, TMP, UTP, UDP, UMP, CTP, CDP, CMP, GTP, GDP, GMP, 3'-AMP, ATP, ADP, and AMP, has low transport activity with cAMP, pyrophosphate, NADH and alpha-NAD(+), and has no activity with NADP(+), NADPH, nicotinamide, nicotinic acid, adenosine, thiamine mono- or diphosphate, inorganic phosphate, CoA, folate, NaCl, malate, malonate, citrate, fumarate, aspartate, glutamate, S-adenosylmethionine, lysine, arginine, and ornithine.
messages: Membrane
messages: chloroplast membrane

3702:AT3G19960
gene id: 3702:AT3G19960
uniprot id: A0A178VKI1
uniprot id: A0A1I9LLW5
uniprot id: F4JCF9
uniprot id: Q9LHE9
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class VIII subfamily.
messages: Endoplasmic reticulum
messages: Endosome
messages: Homodimer.
messages: IQ domain mediates interaction with calmodulin.
messages: Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity). Involved in endocytosis via its action in endosomal trafficking.
messages: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
messages: phragmoplast
messages: plasmodesma

3702:AT4G36720
gene id: 3702:AT4G36720
uniprot id: A0A654FWG0
uniprot id: Q6NLY8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DP1 family.
messages: Membrane

3702:AT3G51860
gene id: 3702:AT3G51860
uniprot id: A0A1I9LSS9
uniprot id: A0A5S9XK74
uniprot id: Q93Z81
names: Activity Regulation
names: Caution
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/proton exchanger (CAX) subfamily.
messages: By Ca(2+), Mg(2+) and Na(+).
messages: Expressed in roots, stems and flowers.
messages: Inhibited by excess of Ca(2+).
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase (By similarity). Involved in ion homeostasis in association with CAX1.
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.
messages: Vacuole membrane

3702:AT4G36870
gene id: 3702:AT4G36870
uniprot id: A0A1P8B7E4
uniprot id: A0A1P8B7F4
uniprot id: Q9SW80
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TALE/BELL homeobox family.
messages: Expressed in lateral organs.
messages: May form heterodimeric complexes with TALE/KNOX proteins STM, KNAT1/BP, KNAT2 and KNAT5 (PubMed:17873098). Interacts OFP1, OFP2, OFP4 and OFP5 (PubMed:15781858). Interacts with KNATM, isoform KNATM-B (PubMed:18398054).
messages: Nucleus
messages: The SR/KY and BELL domains are responsive for the interaction between the TALE/BELL proteins and the TALE/KNOX proteins.
messages: Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.

3702:AT3G15720
gene id: 3702:AT3G15720
uniprot id: A0A1I9LT18
uniprot id: A0A1I9LT19
uniprot id: A8MRN3
uniprot id: Q9LW07
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyl hydrolase 28 family.
messages: cell wall

3702:AT5G16710
gene id: 3702:AT5G16710
uniprot id: A0A178UIL9
uniprot id: Q8LE52
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GST superfamily. DHAR family.
messages: Displays a dual function. As a soluble protein, exhibits glutathione-dependent thiol transferase and dehydroascorbate (DHA) reductase activities (PubMed:12077129). Key component of the ascorbate recycling system. Involved in the redox homeostasis, especially in scavenging of ROS under oxidative stresses (By similarity).
messages: Monomer (By similarity). Interacts with TRX3.
messages: Partial S-glutathionylation and intramolecular disulfide bond formation between Cys-66 and Cys-69 in the presence of oxidized glutathione (GSSG). Could be reduced by TRX-dependent process.
messages: chloroplast stroma

3702:AT1G31580
gene id: 3702:AT1G31580
uniprot id: Q39066
names: Function
names: Induction
names: Miscellaneous
names: Subcellular Location Annotation
names: Tissue Specificity
messages: Absent in the susceptible ecotype cv. Oy-0 (PubMed:8018872). Only present in ecotypes resistant against X.campestris pv. campestris race 750 (e.g. Xcc750) (PubMed:9869403).
messages: Accumulates upon infection by the phytopathogenic bacterium X.campestris pv. campestris (both compatible and incompatible strains Xcc168 and Xcc750, respectively), agent of black rot (PubMed:8018872). Accumulates at higher levels in light than in darkness. Repressed by MIF1 (PubMed:16412086).
messages: Expressed in leaves, flowers and stems, but not in roots.
messages: Maybe involved in defense responses to X.campestris, but probably not a X.campestris pv. campestris race 750 (e.g. Xcc750) resistance gene; according to genetic data, linked to a locus influencing resistance to Xcc750.
messages: cell wall