356851:GA0070612 RS09530
gene id: 356851:GA0070612_RS09530
uniprot id: A0A1C4VY03
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

356851:GA0070612 RS13505
gene id: 356851:GA0070612_RS13505
uniprot id: A0A1C4WQC0
names: Similarity
messages: Belongs to the anti-sigma-factor antagonist family.

356851:GA0070612 RS03780
gene id: 356851:GA0070612_RS03780
uniprot id: A0A1C4UUN0
names: Subcellular Location Annotation
messages: Membrane

356851:GA0070612 RS09590
gene id: 356851:GA0070612_RS09590
uniprot id: A0A1C4VYG1
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

356851:GA0070612 RS09500
gene id: 356851:GA0070612_RS09500
uniprot id: A0A1C4VXZ1
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

356851:GA0070612 RS09595
gene id: 356851:GA0070612_RS09595
uniprot id: A0A1C4VYE5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

356851:GA0070612 RS14705
gene id: 356851:GA0070612_RS14705
uniprot id: A0A1C4WWV7
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MraZ family.
messages: Forms oligomers.
messages: nucleoid

356851:GA0070612 RS07655
gene id: 356851:GA0070612_RS07655
uniprot id: A0A1C4VL66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

356851:GA0070612 RS09480
gene id: 356851:GA0070612_RS09480
uniprot id: A0A1C4VXP2
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

356851:GA0070612 RS15450
gene id: 356851:GA0070612_RS15450
uniprot id: A0A1C4X121
names: Subcellular Location Annotation
messages: Cytoplasm

356851:GA0070612 RS10530
gene id: 356851:GA0070612_RS10530
uniprot id: A0A1C4W5C3
names: Subcellular Location Annotation
messages: Cytoplasm

356851:GA0070612 RS10465
gene id: 356851:GA0070612_RS10465
uniprot id: A0A1C4W4C1
names: Cofactor
names: Function
messages: Binds 1 [3Fe-4S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

356851:GA0070612 RS13585
gene id: 356851:GA0070612_RS13585
uniprot id: A0A1C4WQK1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

356851:GA0070612 RS12615
gene id: 356851:GA0070612_RS12615
uniprot id: A0A1C4WJ88
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.
messages: Binds directly to 16S ribosomal RNA.

356851:GA0070612 RS09355
gene id: 356851:GA0070612_RS09355
uniprot id: A0A1C4VX35
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

356851:GA0070612 RS09585
gene id: 356851:GA0070612_RS09585
uniprot id: A0A1C4VZ55
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

356851:GA0070612 RS30370
gene id: 356851:GA0070612_RS30370
uniprot id: A0A1C4ZBA0
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UMP kinase family.
messages: Catalyzes the reversible phosphorylation of UMP to UDP.
messages: Cytoplasm
messages: Homohexamer.
messages: Inhibited by UTP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

356851:GA0070612 RS09510
gene id: 356851:GA0070612_RS09510
uniprot id: A0A1C4VYN3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

356851:GA0070612 RS28540
gene id: 356851:GA0070612_RS28540
uniprot id: A0A1C4Z4G7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SsgA family.
messages: Cell septum

356851:GA0070612 RS29945
gene id: 356851:GA0070612_RS29945
uniprot id: A0A1C4ZAI7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

356851:GA0070612 RS04455
gene id: 356851:GA0070612_RS04455
uniprot id: A0A1C4UZ13
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

356851:GA0070612 RS09440
gene id: 356851:GA0070612_RS09440
uniprot id: A0A1C4VXW7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

356851:GA0070612 RS21930
gene id: 356851:GA0070612_RS21930
uniprot id: A0A1C4Y862
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase-binding protein RbpA family.
messages: Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
messages: Forms a complex with the RNAP catalytic core and with free principal sigma factors.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

356851:GA0070612 RS09435
gene id: 356851:GA0070612_RS09435
uniprot id: A0A1C4VXE0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

356851:GA0070612 RS14775
gene id: 356851:GA0070612_RS14775
uniprot id: A0A1C4WX73
names: Similarity
messages: Belongs to the YggT family.

356851:GA0070612 RS05685
gene id: 356851:GA0070612_RS05685
uniprot id: A0A1C4V6Z9
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the dCTP deaminase family.
messages: Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
messages: Homotrimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

356851:GA0070612 RS10865
gene id: 356851:GA0070612_RS10865
uniprot id: A0A1C4W6Y8
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional regulator. Probably redox-responsive. The apo- but not holo-form probably binds DNA.
messages: Belongs to the WhiB family.
messages: Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.
messages: Cytoplasm
messages: The Fe-S cluster can be nitrosylated by nitric oxide (NO).
messages: Upon Fe-S cluster removal intramolecular disulfide bonds are formed.

356851:GA0070612 RS09455
gene id: 356851:GA0070612_RS09455
uniprot id: A0A1C4VXP4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

356851:GA0070612 RS07250
gene id: 356851:GA0070612_RS07250
uniprot id: A0A1C4VI69
names: Similarity
messages: Belongs to the PNP/UDP phosphorylase family.

356851:GA0070612 RS09470
gene id: 356851:GA0070612_RS09470
uniprot id: A0A1C4VXP8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

356851:GA0070612 RS06275
gene id: 356851:GA0070612_RS06275
uniprot id: A0A1C4VBA7
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

356851:GA0070612 RS08430
gene id: 356851:GA0070612_RS08430
uniprot id: A0A1C4VR40
names: Similarity
messages: Belongs to the PhoU family.
messages: Belongs to the UPF0111 family.

356851:GA0070612 RS09525
gene id: 356851:GA0070612_RS09525
uniprot id: A0A1C4VY15
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

356851:GA0070612 RS15520
gene id: 356851:GA0070612_RS15520
uniprot id: A0A1C4X1H3
names: Function
names: Similarity
messages: Belongs to the WhiA family.
messages: Involved in cell division and chromosome segregation.

356851:GA0070612 RS26070
gene id: 356851:GA0070612_RS26070
uniprot id: A0A1C4YUH7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

356851:GA0070612 RS06285
gene id: 356851:GA0070612_RS06285
uniprot id: A0A1C4VBR3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

356851:GA0070612 RS12495
gene id: 356851:GA0070612_RS12495
uniprot id: A0A1C4WJ52
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

356851:GA0070612 RS09550
gene id: 356851:GA0070612_RS09550
uniprot id: A0A1C4VYS4
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL30 family.
messages: Part of the 50S ribosomal subunit.

356851:GA0070612 RS02730
gene id: 356851:GA0070612_RS02730
uniprot id: A0A1C4ULS4
names: Similarity
messages: Belongs to the thioredoxin family.

356851:GA0070612 RS09610
gene id: 356851:GA0070612_RS09610
uniprot id: A0A1C4VZB3
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

356851:GA0070612 RS25935
gene id: 356851:GA0070612_RS25935
uniprot id: A0A1C4YUV1
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

356851:GA0070612 RS22225
gene id: 356851:GA0070612_RS22225
uniprot id: A0A1C4YA25
names: Domain
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the prokaryotic ubiquitin-like protein family.
messages: Is modified by deamidation of its C-terminal glutamine to glutamate by the deamidase Dop, a prerequisite to the subsequent pupylation process.
messages: Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation.
messages: Strongly interacts with the proteasome-associated ATPase ARC through a hydrophobic interface; the interacting region of Pup lies in its C-terminal half. There is one Pup binding site per ARC hexamer ring.
messages: The N-terminal unstructured half of Pup provides a signal required to initiate unfolding and degradation by the proteasome but is not needed for pupylation, while the C-terminal helical half of Pup interacts with ARC to target proteins to the proteasome.

356851:GA0070612 RS06105
gene id: 356851:GA0070612_RS06105
uniprot id: A0A1C4VA92
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

356851:GA0070612 RS08400
gene id: 356851:GA0070612_RS08400
uniprot id: A0A1C4VQS4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Heptamer of 7 subunits arranged in a ring.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

356851:GA0070612 RS05255
gene id: 356851:GA0070612_RS05255
uniprot id: A0A1C4V4V9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PurS family.
messages: Cytoplasm
messages: Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.
messages: Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.

356851:GA0070612 RS26665
gene id: 356851:GA0070612_RS26665
uniprot id: A0A1C4YWK9
names: Subcellular Location Annotation
messages: Cytoplasm

356851:GA0070612 RS07320
gene id: 356851:GA0070612_RS07320
uniprot id: A0A1C4VIP3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the YbaB/EbfC family.
messages: Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
messages: Homodimer.
messages: nucleoid

356851:GA0070612 RS09600
gene id: 356851:GA0070612_RS09600
uniprot id: A0A1C4VYX1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

356851:GA0070612 RS09495
gene id: 356851:GA0070612_RS09495
uniprot id: A0A1C4VXS4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

356851:GA0070612 RS01065
gene id: 356851:GA0070612_RS01065
uniprot id: A0A1C4U9I5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

356851:GA0070612 RS30650
gene id: 356851:GA0070612_RS30650
uniprot id: A0A1C4ZCP2
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

356851:GA0070612 RS12490
gene id: 356851:GA0070612_RS12490
uniprot id: A0A1C4WI84
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.