340047:MCAP RS03790
gene id: 340047:MCAP_RS03790
uniprot id: Q2SRA7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
messages: Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.
messages: Cytoplasm

340047:MCAP RS00505
gene id: 340047:MCAP_RS00505
uniprot id: Q2ST22
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
messages: Belongs to the RNR ribonuclease family. RNase R subfamily.
messages: Cytoplasm

340047:MCAP RS00410
gene id: 340047:MCAP_RS00410
uniprot id: Q2ST40
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase A chain family.
messages: Membrane

340047:MCAP RS01720
gene id: 340047:MCAP_RS01720
uniprot id: Q2SSE0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DNA polymerase type-C family. PolC subfamily.
messages: Cytoplasm
messages: Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.

340047:MCAP RS03290
gene id: 340047:MCAP_RS03290
uniprot id: Q2SRJ4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. PTCase family.
messages: Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine.
messages: Cytoplasm
messages: Homotrimer.

340047:MCAP RS01900
gene id: 340047:MCAP_RS01900
uniprot id: Q2SSA4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRF family.
messages: Cytoplasm
messages: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.

340047:MCAP RS03370
gene id: 340047:MCAP_RS03370
uniprot id: Q2SRH9
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

340047:MCAP RS02140
gene id: 340047:MCAP_RS02140
uniprot id: Q2SS65
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DNA polymerase type-Y family.
messages: Binds 2 magnesium ions per subunit.
messages: Cytoplasm
messages: Monomer.
messages: Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.

340047:MCAP RS00245
gene id: 340047:MCAP_RS00245
uniprot id: Q2ST71
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecA family.
messages: Cell membrane
messages: Cytoplasm
messages: Monomer and homodimer. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.
messages: Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.

340047:MCAP RS01820
gene id: 340047:MCAP_RS01820
uniprot id: Q2SSC0
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family.

340047:MCAP RS02970
gene id: 340047:MCAP_RS02970
uniprot id: Q2SRQ5
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03575
gene id: 340047:MCAP_RS03575
uniprot id: Q2SRE1
names: Function
names: Similarity
messages: Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
messages: DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.

340047:MCAP RS02765
gene id: 340047:MCAP_RS02765
uniprot id: Q2SRU5
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS16 family.

340047:MCAP RS03365
gene id: 340047:MCAP_RS03365
uniprot id: Q48980
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL17 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L32.

340047:MCAP RS02395
gene id: 340047:MCAP_RS02395
uniprot id: Q2SS15
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
messages: Cytoplasm
messages: Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.

340047:MCAP RS02360
gene id: 340047:MCAP_RS02360
uniprot id: Q2SS22
names: Similarity
messages: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.

340047:MCAP RS00445
gene id: 340047:MCAP_RS00445
uniprot id: Q2ST33
names: Similarity
messages: Belongs to the ATPase epsilon chain family.

340047:MCAP RS02510
gene id: 340047:MCAP_RS02510
uniprot id: Q2SRZ3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS03350
gene id: 340047:MCAP_RS03350
uniprot id: Q2SRI3
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03475
gene id: 340047:MCAP_RS03475
uniprot id: P10132
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

340047:MCAP RS00690
gene id: 340047:MCAP_RS00690
uniprot id: Q2SSY6
names: Cofactor
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.

340047:MCAP RS01885
gene id: 340047:MCAP_RS01885
uniprot id: Q2SSA7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
messages: Belongs to the EF-Ts family.
messages: Cytoplasm

340047:MCAP RS04100
gene id: 340047:MCAP_RS04100
uniprot id: Q2SR47
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
messages: Binds 1 potassium ion per subunit.
messages: Cytoplasm
messages: Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.

340047:MCAP RS02075
gene id: 340047:MCAP_RS02075
uniprot id: Q2SS78
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmI family.
messages: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
messages: Cytoplasm

340047:MCAP RS00635
gene id: 340047:MCAP_RS00635
uniprot id: Q2SSZ6
names: Similarity
messages: Belongs to the serine/threonine dehydratase family.

340047:MCAP RS00985
gene id: 340047:MCAP_RS00985
uniprot id: Q2SST0
names: Similarity
messages: Belongs to the peptidase M17 family.

340047:MCAP RS01020
gene id: 340047:MCAP_RS01020
uniprot id: Q2SSS4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
messages: Cell membrane
messages: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).

340047:MCAP RS00070
gene id: 340047:MCAP_RS00070
uniprot id: Q2STA5
names: Function
names: Similarity
messages: Belongs to the RecR family.
messages: May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.

340047:MCAP RS00570
gene id: 340047:MCAP_RS00570
uniprot id: P51415
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

340047:MCAP RS03800
gene id: 340047:MCAP_RS03800
uniprot id: Q2SRA5
names: Similarity
names: Subunit
messages: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
messages: Homodimer.

340047:MCAP RS01145
gene id: 340047:MCAP_RS01145
uniprot id: Q49110
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the 2-oxoacid dehydrogenase family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Forms a 24-polypeptide structural core with octahedral symmetry.
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).

340047:MCAP RS00160
gene id: 340047:MCAP_RS00160
uniprot id: Q2ST87
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS02625
gene id: 340047:MCAP_RS02625
uniprot id: Q2SRX1
names: Function
names: Similarity
messages: Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.
messages: Belongs to the Fmt family.

340047:MCAP RS00225
gene id: 340047:MCAP_RS00225
uniprot id: Q2ST75
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
messages: Belongs to the type II topoisomerase GyrB family.
messages: Belongs to the type II topoisomerase family.
messages: Cytoplasm
messages: Few gyrases are as efficient as E.coli at forming negative supercoils. Not all organisms have 2 type II topoisomerases; in organisms with a single type II topoisomerase this enzyme also has to decatenate newly replicated chromosomes.
messages: Heterotetramer, composed of two GyrA and two GyrB chains. In the heterotetramer, GyrA contains the active site tyrosine that forms a transient covalent intermediate with DNA, while GyrB binds cofactors and catalyzes ATP hydrolysis.

340047:MCAP RS03465
gene id: 340047:MCAP_RS03465
uniprot id: P02353
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS3 family.
messages: Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.
messages: Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

340047:MCAP RS02820
gene id: 340047:MCAP_RS02820
uniprot id: Q2SRT5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the VirD4/TraG family.
messages: Membrane

340047:MCAP RS03670
gene id: 340047:MCAP_RS03670
uniprot id: Q2SRC2
names: Function
messages: Part of a high-affinity transport system.

340047:MCAP RS03675
gene id: 340047:MCAP_RS03675
uniprot id: P53661
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily. Cof family.

340047:MCAP RS02605
gene id: 340047:MCAP_RS02605
uniprot id: Q2SRX5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
messages: Belongs to the peptidase S16 family.
messages: By heat shock.
messages: Cytoplasm
messages: Homohexamer. Organized in a ring with a central cavity.

340047:MCAP RS00960
gene id: 340047:MCAP_RS00960
uniprot id: Q2SST5
names: Similarity
messages: Belongs to the glycosyl hydrolase 65 family.

340047:MCAP RS04045
gene id: 340047:MCAP_RS04045
uniprot id: Q2SR57
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane

340047:MCAP RS01075
gene id: 340047:MCAP_RS01075
uniprot id: Q2SSR3
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the enolase family.
messages: Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
messages: Cell surface
messages: Cytoplasm
messages: Secreted
messages: The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.

340047:MCAP RS03110
gene id: 340047:MCAP_RS03110
uniprot id: Q2SRM7
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS00775
gene id: 340047:MCAP_RS00775
uniprot id: Q2SSW9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
messages: Cytoplasm

340047:MCAP RS00140
gene id: 340047:MCAP_RS00140
uniprot id: Q2ST91
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

340047:MCAP RS03280
gene id: 340047:MCAP_RS03280
uniprot id: Q2SRJ6
names: Similarity
messages: Belongs to the agmatine deiminase family.

340047:MCAP RS03895
gene id: 340047:MCAP_RS03895
uniprot id: Q2SR86
names: Similarity
messages: Belongs to the Lgt family.

340047:MCAP RS01865
gene id: 340047:MCAP_RS01865
uniprot id: P71499
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GrpE family.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.

340047:MCAP RS01310
gene id: 340047:MCAP_RS01310
uniprot id: Q2SSL9
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
messages: Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.
messages: Cytoplasm
messages: Monomer.
messages: The C-terminal coiled-coil domain is crucial for aminoacylation activity.
messages: ValRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated threonine is translocated from the active site to the editing site.

340047:MCAP RS03830
gene id: 340047:MCAP_RS03830
uniprot id: Q2SR98
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

340047:MCAP RS00150
gene id: 340047:MCAP_RS00150
uniprot id: Q2ST89
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

340047:MCAP RS01990
gene id: 340047:MCAP_RS01990
uniprot id: Q2SS89
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A8 family.
messages: Cell membrane
messages: This protein specifically catalyzes the removal of signal peptides from prolipoproteins.

340047:MCAP RS02770
gene id: 340047:MCAP_RS02770
uniprot id: Q2SRU4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase RlmH family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.

340047:MCAP RS00145
gene id: 340047:MCAP_RS00145
uniprot id: Q2ST90
names: Caution
names: Subunit
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

340047:MCAP RS00420
gene id: 340047:MCAP_RS00420
uniprot id: Q2ST38
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Cell membrane
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.

340047:MCAP RS01085
gene id: 340047:MCAP_RS01085
uniprot id: Q2SSR1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YqgF nuclease family.
messages: Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
messages: Cytoplasm

340047:MCAP RS03500
gene id: 340047:MCAP_RS03500
uniprot id: P10129
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

340047:MCAP RS01645
gene id: 340047:MCAP_RS01645
uniprot id: Q2SSF4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS03395
gene id: 340047:MCAP_RS03395
uniprot id: P10251
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylate kinase family.
messages: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
messages: Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis. Some bacteria have evolved a zinc-coordinating structure that stabilizes the LID domain.
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS00995
gene id: 340047:MCAP_RS00995
uniprot id: Q2SSS8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.
messages: Membrane

340047:MCAP RS02160
gene id: 340047:MCAP_RS02160
uniprot id: Q2SS61
names: Cofactor
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.

340047:MCAP RS01735
gene id: 340047:MCAP_RS01735
uniprot id: Q2SSD7
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of tryptophan to tRNA(Trp).
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

340047:MCAP RS01030
gene id: 340047:MCAP_RS01030
uniprot id: Q2SSS2
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

340047:MCAP RS00350
gene id: 340047:MCAP_RS00350
uniprot id: Q2ST52
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL1 family.
messages: Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
messages: Part of the 50S ribosomal subunit.
messages: Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.

340047:MCAP RS01775
gene id: 340047:MCAP_RS01775
uniprot id: Q2SSC9
names: Similarity
messages: Belongs to the MG067/MG068/MG395 family.

340047:MCAP RS01935
gene id: 340047:MCAP_RS01935
uniprot id: Q2SSA0
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

340047:MCAP RS01240
gene id: 340047:MCAP_RS01240
uniprot id: Q2SSN1
names: Function
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
messages: Necessary for normal cell division and for the maintenance of normal septation.

340047:MCAP RS03560
gene id: 340047:MCAP_RS03560
uniprot id: Q2SRE4
names: Function
names: Similarity
names: Subunit
messages: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
messages: Belongs to the GatB/GatE family. GatB subfamily.
messages: Heterotrimer of A, B and C subunits.

340047:MCAP RS00525
gene id: 340047:MCAP_RS00525
uniprot id: Q2ST18
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase large chain family.

340047:MCAP RS02405
gene id: 340047:MCAP_RS02405
uniprot id: Q2SS13
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MnmG family. TrmFO subfamily.
messages: Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs.
messages: Cytoplasm

340047:MCAP RS03090
gene id: 340047:MCAP_RS03090
uniprot id: Q2SRN1
names: Function
names: Similarity
messages: Belongs to the RmuC family.
messages: Involved in DNA recombination.

340047:MCAP RS01270
gene id: 340047:MCAP_RS01270
uniprot id: Q2SSM5
names: Function
names: Similarity
messages: Belongs to the GreA/GreB family.
messages: Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.

340047:MCAP RS01925
gene id: 340047:MCAP_RS01925
uniprot id: Q2SSA2
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03430
gene id: 340047:MCAP_RS03430
uniprot id: P10130
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

340047:MCAP RS01150
gene id: 340047:MCAP_RS01150
uniprot id: Q2SSP8
names: Cofactor
names: Miscellaneous
names: Similarity
messages: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: The active site is a redox-active disulfide bond.

340047:MCAP RS02565
gene id: 340047:MCAP_RS02565
uniprot id: Q2SRY2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the endoribonuclease YbeY family.
messages: Binds 1 zinc ion.
messages: Cytoplasm
messages: Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.

340047:MCAP RS03455
gene id: 340047:MCAP_RS03455
uniprot id: P10142
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

340047:MCAP RS01950
gene id: 340047:MCAP_RS01950
uniprot id: Q2SS97
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

340047:MCAP RS01210
gene id: 340047:MCAP_RS01210
uniprot id: Q2SSN7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ThiI family.
messages: Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
messages: Cytoplasm

340047:MCAP RS03835
gene id: 340047:MCAP_RS03835
uniprot id: Q2SR97
names: Similarity
messages: Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.

340047:MCAP RS01995
gene id: 340047:MCAP_RS01995
uniprot id: Q2SS88
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.
messages: Responsible for synthesis of pseudouridine from uracil.

340047:MCAP RS01230
gene id: 340047:MCAP_RS01230
uniprot id: Q2SSN3
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS00035
gene id: 340047:MCAP_RS00035
uniprot id: P24116
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DnaA family.
messages: Cytoplasm
messages: Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity).

340047:MCAP RS00455
gene id: 340047:MCAP_RS00455
uniprot id: Q2ST31
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIB subfamily.
messages: Cell inner membrane
messages: Mediates magnesium influx to the cytosol.

340047:MCAP RS02410
gene id: 340047:MCAP_RS02410
uniprot id: Q2SS12
names: Similarity
messages: Belongs to the CutC family.

340047:MCAP RS02560
gene id: 340047:MCAP_RS02560
uniprot id: Q2SRY3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
messages: Cell membrane
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS02325
gene id: 340047:MCAP_RS02325
uniprot id: Q2SS29
names: Similarity
messages: Belongs to the 6-phosphogluconate dehydrogenase family.

340047:MCAP RS00770
gene id: 340047:MCAP_RS00770
uniprot id: Q2SSX0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

340047:MCAP RS01275
gene id: 340047:MCAP_RS01275
uniprot id: Q2SSM4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrC family.
messages: Cytoplasm
messages: Interacts with UvrB in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.

340047:MCAP RS01135
gene id: 340047:MCAP_RS01135
uniprot id: Q2SSQ1
names: Function
names: Subunit
messages: Heterodimer of an alpha and a beta chain.
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).

340047:MCAP RS01495
gene id: 340047:MCAP_RS01495
uniprot id: Q2SSI0
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

340047:MCAP RS01710
gene id: 340047:MCAP_RS01710
uniprot id: Q2SSE2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RimP family.
messages: Cytoplasm
messages: Required for maturation of 30S ribosomal subunits.

340047:MCAP RS03070
gene id: 340047:MCAP_RS03070
uniprot id: Q2SRN6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0154 family.
messages: Membrane

340047:MCAP RS02355
gene id: 340047:MCAP_RS02355
uniprot id: Q2SS23
names: Similarity
messages: Belongs to the peptidase M13 family.

340047:MCAP RS00065
gene id: 340047:MCAP_RS00065
uniprot id: Q2STA6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaX/STICHEL family.
messages: DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
messages: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.

340047:MCAP RS03360
gene id: 340047:MCAP_RS03360
uniprot id: Q2SRI1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
messages: Belongs to the ABC transporter superfamily. Energy-coupling factor EcfA family.
messages: Cell membrane
messages: Forms a stable energy-coupling factor (ECF) transporter complex composed of 2 membrane-embedded substrate-binding proteins (S component), 2 ATP-binding proteins (A component) and 2 transmembrane proteins (T component).

340047:MCAP RS03970
gene id: 340047:MCAP_RS03970
uniprot id: Q2SR72
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the type IA topoisomerase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.
messages: Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.

340047:MCAP RS00345
gene id: 340047:MCAP_RS00345
uniprot id: Q2ST53
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

340047:MCAP RS01905
gene id: 340047:MCAP_RS01905
uniprot id: Q2SSA3
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS01025
gene id: 340047:MCAP_RS01025
uniprot id: Q2SSS3
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

340047:MCAP RS01970
gene id: 340047:MCAP_RS01970
uniprot id: Q2SS93
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the FtsZ family.
messages: Cytoplasm
messages: Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
messages: Homodimer. Polymerizes to form a dynamic ring structure in a strictly GTP-dependent manner. Interacts directly with several other division proteins.

340047:MCAP RS02540
gene id: 340047:MCAP_RS02540
uniprot id: Q2SRY7
names: Function
names: Similarity
messages: Belongs to the sigma-70 factor family.
messages: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.

340047:MCAP RS03340
gene id: 340047:MCAP_RS03340
uniprot id: Q2SRI5
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03275
gene id: 340047:MCAP_RS03275
uniprot id: Q2SRJ7
names: Similarity
messages: Belongs to the carbamate kinase family.

340047:MCAP RS02215
gene id: 340047:MCAP_RS02215
uniprot id: Q2SS51
names: Cofactor
names: Similarity
messages: Belongs to the metallo-dependent hydrolases superfamily. NagA family.
messages: Binds 1 divalent metal cation per subunit.

340047:MCAP RS01095
gene id: 340047:MCAP_RS01095
uniprot id: Q2SSQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Membrane

340047:MCAP RS00785
gene id: 340047:MCAP_RS00785
uniprot id: Q2SSW7
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03285
gene id: 340047:MCAP_RS03285
uniprot id: Q2SRJ5
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS01960
gene id: 340047:MCAP_RS01960
uniprot id: Q2SS95
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RsmH family.
messages: Cytoplasm
messages: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.

340047:MCAP RS03625
gene id: 340047:MCAP_RS03625
uniprot id: Q2SRD1
names: Function
names: Similarity
messages: Belongs to the MsrA Met sulfoxide reductase family.
messages: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.

340047:MCAP RS04180
gene id: 340047:MCAP_RS04180
uniprot id: Q2SR36
names: Similarity
messages: Belongs to the thioredoxin family.

340047:MCAP RS01630
gene id: 340047:MCAP_RS01630
uniprot id: Q2SSF7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
messages: Cell membrane
messages: Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner.

340047:MCAP RS04350
gene id: 340047:MCAP_RS04350
uniprot id: P43039
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RnpA family.
messages: Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit.
messages: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.

340047:MCAP RS02530
gene id: 340047:MCAP_RS02530
uniprot id: Q2SRY9
names: Similarity
messages: Belongs to the GTP cyclohydrolase I type 2/NIF3 family.

340047:MCAP RS03195
gene id: 340047:MCAP_RS03195
uniprot id: Q2SRL0
names: Similarity
names: Subunit
messages: Belongs to the FPG family.
messages: Monomer.

340047:MCAP RS00050
gene id: 340047:MCAP_RS00050
uniprot id: P43038
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
messages: Cytoplasm
messages: Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.

340047:MCAP RS00400
gene id: 340047:MCAP_RS00400
uniprot id: Q2ST42
names: Activity Regulation
names: Cofactor
names: Function
names: Similarity
messages: Allosterically activated by GTP.
messages: Belongs to the UPRTase family.
messages: Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.
messages: Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.

340047:MCAP RS00045
gene id: 340047:MCAP_RS00045
uniprot id: P43041
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ribonuclease M5 family.
messages: Binds two Mg(2+) per subunit.
messages: Cytoplasm
messages: Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.

340047:MCAP RS02255
gene id: 340047:MCAP_RS02255
uniprot id: Q2SS43
names: Similarity
messages: Belongs to the lipase/esterase LIP3/BchO family.

340047:MCAP RS00975
gene id: 340047:MCAP_RS00975
uniprot id: Q2SST2
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M3B family.
messages: Binds 1 zinc ion.
messages: Has oligopeptidase activity and degrades a variety of small bioactive peptides.

340047:MCAP RS01940
gene id: 340047:MCAP_RS01940
uniprot id: Q2SS99
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
messages: Binds 2 magnesium ions per tetramer.
messages: Cytoplasm
messages: Tetramer of two alpha and two beta subunits.

340047:MCAP RS00485
gene id: 340047:MCAP_RS00485
uniprot id: Q2ST25
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS00440
gene id: 340047:MCAP_RS00440
uniprot id: Q2ST34
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.

340047:MCAP RS00540
gene id: 340047:MCAP_RS00540
uniprot id: Q2ST15
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL9 family.
messages: Binds to the 23S rRNA.

340047:MCAP RS01170
gene id: 340047:MCAP_RS01170
uniprot id: P45616
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial CoaD family.
messages: Cytoplasm
messages: Homohexamer.
messages: Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.

340047:MCAP RS03380
gene id: 340047:MCAP_RS03380
uniprot id: Q2SRH7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

340047:MCAP RS03870
gene id: 340047:MCAP_RS03870
uniprot id: Q2SR91
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UvrB family.
messages: Cytoplasm
messages: Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.
messages: The beta-hairpin motif is involved in DNA binding.

340047:MCAP RS00165
gene id: 340047:MCAP_RS00165
uniprot id: Q2ST86
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

340047:MCAP RS00295
gene id: 340047:MCAP_RS00295
uniprot id: Q2ST62
names: Similarity
messages: Belongs to the TlyA family.

340047:MCAP RS00425
gene id: 340047:MCAP_RS00425
uniprot id: Q2ST37
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase delta chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.

340047:MCAP RS01650
gene id: 340047:MCAP_RS01650
uniprot id: Q2SSF3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RbfA family.
messages: Cytoplasm
messages: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal subunits or 70S ribosomes.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.

340047:MCAP RS03795
gene id: 340047:MCAP_RS03795
uniprot id: Q2SRA6
names: Similarity
messages: Belongs to the phosphohexose mutase family.

340047:MCAP RS02425
gene id: 340047:MCAP_RS02425
uniprot id: Q2SS09
names: Function
names: Similarity
messages: Belongs to the UPF0122 family.
messages: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.

340047:MCAP RS00560
gene id: 340047:MCAP_RS00560
uniprot id: Q2ST11
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS03055
gene id: 340047:MCAP_RS03055
uniprot id: Q2SRN9
names: Similarity
messages: Belongs to the lipase/esterase LIP3/BchO family.

340047:MCAP RS01840
gene id: 340047:MCAP_RS01840
uniprot id: Q2SSB6
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the HAM1 NTPase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.

340047:MCAP RS02915
gene id: 340047:MCAP_RS02915
uniprot id: Q2SRR6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytidylate kinase family. Type 1 subfamily.
messages: Cytoplasm

340047:MCAP RS02775
gene id: 340047:MCAP_RS02775
uniprot id: Q2SRU3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Composed of three domains: the N-terminal N domain, which is responsible for interactions with the ribosome, the central G domain, which binds GTP, and the C-terminal M domain, which binds the RNA and the signal sequence of the RNC.
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY.
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.

340047:MCAP RS02675
gene id: 340047:MCAP_RS02675
uniprot id: Q2SRW2
names: Function
names: Similarity
messages: Belongs to the NadD family.
messages: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).

340047:MCAP RS00675
gene id: 340047:MCAP_RS00675
uniprot id: Q48965
names: Activity Regulation
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.
messages: Belongs to the CTP synthase family.
messages: CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.
messages: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
messages: Homotetramer.

340047:MCAP RS01200
gene id: 340047:MCAP_RS01200
uniprot id: Q2SSN9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS4 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
messages: With S5 and S12 plays an important role in translational accuracy.

340047:MCAP RS02445
gene id: 340047:MCAP_RS02445
uniprot id: Q2SS05
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
messages: Membrane

340047:MCAP RS01660
gene id: 340047:MCAP_RS01660
uniprot id: Q2SSF1
names: Similarity
messages: Belongs to the RibF family.

340047:MCAP RS01345
gene id: 340047:MCAP_RS01345
uniprot id: Q2SSL1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TsaE family.
messages: Cytoplasm

340047:MCAP RS01785
gene id: 340047:MCAP_RS01785
uniprot id: Q2SSC7
names: Similarity
messages: Belongs to the MG067/MG068/MG395 family.

340047:MCAP RS01845
gene id: 340047:MCAP_RS01845
uniprot id: Q2SSB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
messages: Could methylate the ribose at the nucleotide 34 wobble position in tRNA.
messages: Cytoplasm

340047:MCAP RS00730
gene id: 340047:MCAP_RS00730
uniprot id: P71496
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the prokaryotic/mitochondrial release factor family.
messages: Cytoplasm
messages: Methylated by PrmC. Methylation increases the termination efficiency of RF1 (By similarity).
messages: Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.

340047:MCAP RS01755
gene id: 340047:MCAP_RS01755
uniprot id: Q2SSD3
names: Similarity
messages: Belongs to the MG067/MG068/MG395 family.

340047:MCAP RS01090
gene id: 340047:MCAP_RS01090
uniprot id: Q2SSR0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

340047:MCAP RS04255
gene id: 340047:MCAP_RS04255
uniprot id: Q2SR22
names: Similarity
messages: Belongs to the PNP/UDP phosphorylase family.

340047:MCAP RS00500
gene id: 340047:MCAP_RS00500
uniprot id: Q2ST23
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SmpB family.
messages: Cytoplasm
messages: Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation. The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.

340047:MCAP RS03215
gene id: 340047:MCAP_RS03215
uniprot id: Q2SRK6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
messages: Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS04245
gene id: 340047:MCAP_RS04245
uniprot id: Q2SR24
names: Similarity
messages: Belongs to the lipase/esterase LIP3/BchO family.

340047:MCAP RS01060
gene id: 340047:MCAP_RS01060
uniprot id: Q2SSR6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS00725
gene id: 340047:MCAP_RS00725
uniprot id: Q2SSX9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the thymidine kinase family.
messages: Cytoplasm
messages: Homotetramer.

340047:MCAP RS00370
gene id: 340047:MCAP_RS00370
uniprot id: Q2ST48
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

340047:MCAP RS03605
gene id: 340047:MCAP_RS03605
uniprot id: Q2SRD5
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS04335
gene id: 340047:MCAP_RS04335
uniprot id: P43044
names: Similarity
messages: Belongs to the peptidase S49 family.

340047:MCAP RS00460
gene id: 340047:MCAP_RS00460
uniprot id: Q2ST29
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the arginine deiminase family.
messages: Cytoplasm

340047:MCAP RS01035
gene id: 340047:MCAP_RS01035
uniprot id: Q2SSS1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-3 family.
messages: Cytoplasm
messages: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
messages: Monomer.

340047:MCAP RS01325
gene id: 340047:MCAP_RS01325
uniprot id: Q2SSL6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Monomer. Associates with 30S ribosomal subunit, binds 16S rRNA.
messages: One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.

340047:MCAP RS00515
gene id: 340047:MCAP_RS00515
uniprot id: Q2ST20
names: Similarity
names: Subunit
messages: Belongs to the ribonucleoside diphosphate reductase small chain family.
messages: Tetramer of two alpha and two beta subunits.

340047:MCAP RS03085
gene id: 340047:MCAP_RS03085
uniprot id: Q2SRN2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MnmG family. TrmFO subfamily.
messages: Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs.
messages: Cytoplasm

340047:MCAP RS02430
gene id: 340047:MCAP_RS02430
uniprot id: Q2SS08
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. FtsY subfamily.
messages: Cell membrane
messages: Cytoplasm
messages: Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
messages: Membrane
messages: Part of the signal recognition particle protein translocation system, which is composed of SRP and FtsY.

340047:MCAP RS00520
gene id: 340047:MCAP_RS00520
uniprot id: Q2ST19
names: Function
names: Similarity
messages: Belongs to the NrdI family.
messages: Probably involved in ribonucleotide reductase function.

340047:MCAP RS02620
gene id: 340047:MCAP_RS02620
uniprot id: Q2SRX2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the elongation factor P family.
messages: Cytoplasm
messages: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.

340047:MCAP RS04135
gene id: 340047:MCAP_RS04135
uniprot id: Q2SR40
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
messages: Cell membrane
messages: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (PhnC), two transmembrane proteins (PhnE) and a solute-binding protein (PhnD).

340047:MCAP RS02135
gene id: 340047:MCAP_RS02135
uniprot id: Q2SS66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the uridine kinase family.
messages: Cytoplasm

340047:MCAP RS01620
gene id: 340047:MCAP_RS01620
uniprot id: Q2SSF9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNase H family.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.

340047:MCAP RS01165
gene id: 340047:MCAP_RS01165
uniprot id: P45615
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MG067/MG068/MG395 family.
messages: Cell membrane

340047:MCAP RS02085
gene id: 340047:MCAP_RS02085
uniprot id: Q2SS76
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.

340047:MCAP RS02305
gene id: 340047:MCAP_RS02305
uniprot id: Q2SS33
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.
messages: Cell membrane
messages: Heterotetramer composed of ParC and ParE.
messages: Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule.

340047:MCAP RS02930
gene id: 340047:MCAP_RS02930
uniprot id: Q2SRR3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPase family.
messages: Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
messages: Cytoplasm
messages: Homohexamer.

340047:MCAP RS04030
gene id: 340047:MCAP_RS04030
uniprot id: Q2SR60
names: Function
names: Similarity
messages: ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.

340047:MCAP RS02760
gene id: 340047:MCAP_RS02760
uniprot id: Q2SRU6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
messages: Belongs to the RimM family.
messages: Binds ribosomal protein S19.
messages: Cytoplasm
messages: The PRC barrel domain binds ribosomal protein S19.

340047:MCAP RS04605
gene id: 340047:MCAP_RS04605
uniprot id: Q2SRY5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Catalyzes the attachment of glycine to tRNA(Gly).
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS00375
gene id: 340047:MCAP_RS00375
uniprot id: Q2ST47
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase beta' chain family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Binds 2 Zn(2+) ions per subunit.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

340047:MCAP RS01305
gene id: 340047:MCAP_RS01305
uniprot id: Q2SSM0
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NAD kinase family.
messages: Cytoplasm
messages: Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

340047:MCAP RS04095
gene id: 340047:MCAP_RS04095
uniprot id: Q2SR48
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.
messages: Binds directly to 16S ribosomal RNA.

340047:MCAP RS03900
gene id: 340047:MCAP_RS03900
uniprot id: Q2SR85
names: Similarity
names: Subunit
messages: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family.
messages: Homodimer.

340047:MCAP RS03775
gene id: 340047:MCAP_RS03775
uniprot id: Q49006
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the BPG-independent phosphoglycerate mutase family.
messages: Binds 2 manganese ions per subunit.
messages: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
messages: Monomer.

340047:MCAP RS02170
gene id: 340047:MCAP_RS02170
uniprot id: Q2SS60
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RuvA family.
messages: Forms a complex with RuvB.
messages: The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.

340047:MCAP RS02480
gene id: 340047:MCAP_RS02480
uniprot id: Q2SRZ9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PlsX family.
messages: Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
messages: Cytoplasm
messages: Homodimer. Probably interacts with PlsY.

340047:MCAP RS01675
gene id: 340047:MCAP_RS01675
uniprot id: Q2SSE8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

340047:MCAP RS00595
gene id: 340047:MCAP_RS00595
uniprot id: Q2ST04
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS00415
gene id: 340047:MCAP_RS00415
uniprot id: Q2ST39
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.

340047:MCAP RS00805
gene id: 340047:MCAP_RS00805
uniprot id: Q2SSW4
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
messages: Consists of three domains; the N-terminal catalytic domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with tRNA(Ala), serves as a bridge to cooperatively bring together the editing and aminoacylation centers thus stimulating deacylation of misacylated tRNAs.
messages: Cytoplasm

340047:MCAP RS00360
gene id: 340047:MCAP_RS00360
uniprot id: Q2ST50
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL12 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.
messages: Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.

340047:MCAP RS03390
gene id: 340047:MCAP_RS03390
uniprot id: Q59509
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Monomer.
messages: Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.

340047:MCAP RS02400
gene id: 340047:MCAP_RS02400
uniprot id: Q2SS14
names: Cofactor
messages: Binds 1 zinc ion per subunit.

340047:MCAP RS01160
gene id: 340047:MCAP_RS01160
uniprot id: Q49113
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the acetokinase family.
messages: Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction.
messages: Cytoplasm
messages: Homodimer.
messages: Mg(2+). Can also accept Mn(2+).

340047:MCAP RS03375
gene id: 340047:MCAP_RS03375
uniprot id: Q2SRH8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

340047:MCAP RS00660
gene id: 340047:MCAP_RS00660
uniprot id: Q2SSZ1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
messages: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS03100
gene id: 340047:MCAP_RS03100
uniprot id: Q2SRM9
names: Cofactor
messages: Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.

340047:MCAP RS04110
gene id: 340047:MCAP_RS04110
uniprot id: Q2SR45
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KAE1 / TsaD family.
messages: Binds 1 Fe(2+) ion per subunit.
messages: Cytoplasm
messages: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction.

340047:MCAP RS04225
gene id: 340047:MCAP_RS04225
uniprot id: Q2SR27
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS04075
gene id: 340047:MCAP_RS04075
uniprot id: Q2SR52
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS02020
gene id: 340047:MCAP_RS02020
uniprot id: Q2SS83
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the P-Pant transferase superfamily. AcpS family.
messages: Cytoplasm
messages: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein.

340047:MCAP RS00600
gene id: 340047:MCAP_RS00600
uniprot id: Q2ST03
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS03425
gene id: 340047:MCAP_RS03425
uniprot id: P04446
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS8 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.

340047:MCAP RS02900
gene id: 340047:MCAP_RS02900
uniprot id: Q2SRR9
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

340047:MCAP RS01860
gene id: 340047:MCAP_RS01860
uniprot id: P71498
names: Function
names: Similarity
messages: Belongs to the HrcA family.
messages: Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons.

340047:MCAP RS00670
gene id: 340047:MCAP_RS00670
uniprot id: Q2SSZ0
names: Similarity
messages: Belongs to the RpoE family.

340047:MCAP RS00760
gene id: 340047:MCAP_RS00760
uniprot id: Q2SSX2
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03015
gene id: 340047:MCAP_RS03015
uniprot id: Q2SRP7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TACO1 family.
messages: Cytoplasm

340047:MCAP RS03405
gene id: 340047:MCAP_RS03405
uniprot id: P10138
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL15 family.
messages: Binds to the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

340047:MCAP RS03810
gene id: 340047:MCAP_RS03810
uniprot id: Q2SRA3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a magnesium transporter.
messages: Belongs to the SLC41A transporter family.
messages: Cell membrane
messages: Homodimer.
messages: Membrane

340047:MCAP RS00310
gene id: 340047:MCAP_RS00310
uniprot id: Q2ST59
names: Similarity
messages: Belongs to the NusB family.

340047:MCAP RS02310
gene id: 340047:MCAP_RS02310
uniprot id: P50028
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the type II topoisomerase family. ParE type 2 subfamily.
messages: Binds two Mg(2+) per subunit. The magnesium ions form salt bridges with both the protein and the DNA. Can also accept other divalent metal cations, such as Mn(2+) or Ca(2+).
messages: Cytoplasm
messages: Heterotetramer composed of ParC and ParE.
messages: There is a bona fide GyrB elsewhere in this organism (UniProtKB:Q2ST75).
messages: Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule.

340047:MCAP RS01985
gene id: 340047:MCAP_RS01985
uniprot id: Q2SS90
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
messages: Cytoplasm
messages: IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).
messages: Monomer.

340047:MCAP RS00820
gene id: 340047:MCAP_RS00820
uniprot id: Q2SSW1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS01175
gene id: 340047:MCAP_RS01175
uniprot id: P45617
names: Activity Regulation
names: Domain
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PEP-utilizing enzyme family.
messages: Cytoplasm
messages: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
messages: Homodimer.
messages: Irreversibly inhibited the sulfhydryl reagent N-ethylmaleimide (NEM).
messages: The N-terminal domain contains the HPr binding site, the central domain the pyrophosphate/phosphate carrier histidine, and the C-terminal domain the pyruvate binding site.
messages: The reaction takes place in three steps, mediated by a phosphocarrier histidine residue located on the surface of the central domain. The two first partial reactions are catalyzed at an active site located on the N-terminal domain, and the third partial reaction is catalyzed at an active site located on the C-terminal domain. For catalytic turnover, the central domain swivels from the concave surface of the N-terminal domain to that of the C-terminal domain.

340047:MCAP RS00040
gene id: 340047:MCAP_RS00040
uniprot id: P24117
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the beta sliding clamp family.
messages: Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.
messages: Cytoplasm
messages: Forms a ring-shaped head-to-tail homodimer around DNA which binds and tethers DNA polymerases and other proteins to the DNA. The DNA replisome complex has a single clamp-loading complex (3 tau and 1 each of delta, delta', psi and chi subunits) which binds 3 Pol III cores (1 core on the leading strand and 2 on the lagging strand) each with a beta sliding clamp dimer. Additional proteins in the replisome are other copies of gamma, psi and chi, Ssb, DNA helicase and RNA primase.

340047:MCAP RS03335
gene id: 340047:MCAP_RS03335
uniprot id: Q2SRI6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL13 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

340047:MCAP RS04185
gene id: 340047:MCAP_RS04185
uniprot id: Q2SR35
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 3 Mg(2+) ions per subunit.
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS04290
gene id: 340047:MCAP_RS04290
uniprot id: Q2SR15
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MnmG family.
messages: Cytoplasm
messages: Homodimer. Heterotetramer of two MnmE and two MnmG subunits.
messages: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.

340047:MCAP RS01640
gene id: 340047:MCAP_RS01640
uniprot id: Q48979
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
messages: Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS03585
gene id: 340047:MCAP_RS03585
uniprot id: P45614
names: Similarity
messages: Belongs to the pseudouridine synthase RluA family.

340047:MCAP RS03920
gene id: 340047:MCAP_RS03920
uniprot id: Q2SR81
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03460
gene id: 340047:MCAP_RS03460
uniprot id: P02415
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

340047:MCAP RS03315
gene id: 340047:MCAP_RS03315
uniprot id: Q2SRI9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm

340047:MCAP RS02610
gene id: 340047:MCAP_RS02610
uniprot id: Q2SRX4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FKBP-type PPIase family. Tig subfamily.
messages: Consists of 3 domains; the N-terminus binds the ribosome, the middle domain has PPIase activity, while the C-terminus has intrinsic chaperone activity on its own.
messages: Cytoplasm
messages: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase.

340047:MCAP RS00430
gene id: 340047:MCAP_RS00430
uniprot id: Q2ST36
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a(1), b(2) and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF(1) is attached to CF(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.

340047:MCAP RS03400
gene id: 340047:MCAP_RS03400
uniprot id: P10250
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SecY/SEC61-alpha family.
messages: Cell membrane
messages: Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.
messages: The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.

340047:MCAP RS01800
gene id: 340047:MCAP_RS01800
uniprot id: Q2SSC4
names: Similarity
messages: Belongs to the ATPase gamma chain family.

340047:MCAP RS02415
gene id: 340047:MCAP_RS02415
uniprot id: Q2SS11
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit.
messages: Binds 2 divalent ions per subunit.
messages: Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
messages: Cytoplasm
messages: Homotetramer; dimer of dimers.

340047:MCAP RS00305
gene id: 340047:MCAP_RS00305
uniprot id: Q2ST60
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XseA family.
messages: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
messages: Cytoplasm
messages: Heterooligomer composed of large and small subunits.

340047:MCAP RS02280
gene id: 340047:MCAP_RS02280
uniprot id: Q2SS38
names: Similarity
messages: Belongs to the MG185/MG260 family.

340047:MCAP RS00435
gene id: 340047:MCAP_RS00435
uniprot id: Q2ST35
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: Cell membrane
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.

340047:MCAP RS02520
gene id: 340047:MCAP_RS02520
uniprot id: Q2SRZ1
names: Subcellular Location Annotation
messages: Cell membrane
messages: Membrane

340047:MCAP RS02745
gene id: 340047:MCAP_RS02745
uniprot id: Q2SRU9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
messages: Cytoplasm
messages: Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity.

340047:MCAP RS01690
gene id: 340047:MCAP_RS01690
uniprot id: Q2SSE6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.

340047:MCAP RS00260
gene id: 340047:MCAP_RS00260
uniprot id: Q2ST68
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

340047:MCAP RS03160
gene id: 340047:MCAP_RS03160
uniprot id: Q2SRL7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the LemA family.
messages: Membrane

340047:MCAP RS01615
gene id: 340047:MCAP_RS01615
uniprot id: Q2SSG0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 3 subfamily.
messages: Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
messages: Consists of three domains: the N-terminal catalytic domain, the anticodon-binding domain and the C-terminal extension.
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS03135
gene id: 340047:MCAP_RS03135
uniprot id: Q2SRM2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
messages: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.
messages: Cytoplasm
messages: Homodimer, may be a subunit of the RNA degradosome.

340047:MCAP RS03545
gene id: 340047:MCAP_RS03545
uniprot id: Q2SRE7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
messages: Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
messages: Homodimer.

340047:MCAP RS01040
gene id: 340047:MCAP_RS01040
uniprot id: Q2SSS0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the polypeptide deformylase family.
messages: Binds 1 Fe(2+) ion.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.

340047:MCAP RS01870
gene id: 340047:MCAP_RS01870
uniprot id: Q2SSB0
names: Function
names: Induction
names: Similarity
messages: Acts as a chaperone.
messages: Belongs to the heat shock protein 70 family.
messages: By stress conditions e.g. heat shock (By similarity).

340047:MCAP RS00055
gene id: 340047:MCAP_RS00055
uniprot id: P43040
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS00920
gene id: 340047:MCAP_RS00920
uniprot id: Q2SSU2
names: Similarity
messages: Belongs to the N(4)/N(6)-methyltransferase family.

340047:MCAP RS04200
gene id: 340047:MCAP_RS04200
uniprot id: Q2SR32
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
messages: Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
messages: Consists of two distinct domains, a catalytic core and a N-terminal extension that is involved in tRNA binding.
messages: Cytoplasm
messages: Homodimer. The tRNA molecule binds across the dimer.

340047:MCAP RS00655
gene id: 340047:MCAP_RS00655
uniprot id: Q2SSZ2
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03765
gene id: 340047:MCAP_RS03765
uniprot id: Q2SRB2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the triosephosphate isomerase family.
messages: Cytoplasm
messages: Homodimer.
messages: Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P).

340047:MCAP RS00765
gene id: 340047:MCAP_RS00765
uniprot id: Q2SSX1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

340047:MCAP RS01180
gene id: 340047:MCAP_RS01180
uniprot id: P45618
names: Cofactor
names: Domain
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Binds 1 zinc ion per glycerol kinase EIIA-Glc dimer. The zinc ion is important for dimerization.
messages: Cytoplasm
messages: Heterodimer with glycerol kinase (glpk).
messages: The EIIA domain is phosphorylated by phospho-HPr on a histidyl residue. Then, it transfers the phosphoryl group to the EIIB domain.
messages: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II complex composed of PtsG and Crr is involved in glucose transport.

340047:MCAP RS03180
gene id: 340047:MCAP_RS03180
uniprot id: Q2SRL3
names: Similarity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.

340047:MCAP RS01320
gene id: 340047:MCAP_RS01320
uniprot id: Q2SSL7
names: Similarity
messages: Belongs to the ribulose-phosphate 3-epimerase family.

340047:MCAP RS02880
gene id: 340047:MCAP_RS02880
uniprot id: Q2SRS3
names: Similarity
messages: Belongs to the UPF0236 family.

340047:MCAP RS01725
gene id: 340047:MCAP_RS01725
uniprot id: Q2SSD9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDS family.
messages: Membrane

340047:MCAP RS01265
gene id: 340047:MCAP_RS01265
uniprot id: Q2SSM6
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

340047:MCAP RS03200
gene id: 340047:MCAP_RS03200
uniprot id: Q2SRK9
names: Function
names: Similarity
messages: Belongs to the DNA polymerase type-A family.
messages: In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.

340047:MCAP RS03600
gene id: 340047:MCAP_RS03600
uniprot id: P45612
names: Function
names: Similarity
messages: Belongs to the helicase family. UvrD subfamily.
messages: Has both ATPase and helicase activities. Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present. Involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair (By similarity).

340047:MCAP RS04275
gene id: 340047:MCAP_RS04275
uniprot id: Q2SR18
names: Subcellular Location Annotation
messages: Cell inner membrane
messages: Membrane

340047:MCAP RS03490
gene id: 340047:MCAP_RS03490
uniprot id: P10135
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL4 family.
messages: Forms part of the polypeptide exit tunnel.
messages: One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: Part of the 50S ribosomal subunit.

340047:MCAP RS01895
gene id: 340047:MCAP_RS01895
uniprot id: Q2SSA5
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UMP kinase family.
messages: Catalyzes the reversible phosphorylation of UMP to UDP.
messages: Cytoplasm
messages: Homohexamer.
messages: Inhibited by UTP.

340047:MCAP RS03685
gene id: 340047:MCAP_RS03685
uniprot id: Q2SRB9
names: Similarity
messages: Belongs to the RutC family.

340047:MCAP RS01590
gene id: 340047:MCAP_RS01590
uniprot id: Q2SSG4
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

340047:MCAP RS02715
gene id: 340047:MCAP_RS02715
uniprot id: Q2SRV5
names: Similarity
messages: Belongs to the ABC transporter superfamily.

340047:MCAP RS03595
gene id: 340047:MCAP_RS03595
uniprot id: P45611
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HPr family.
messages: Cytoplasm
messages: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the PTS EIIA domain.
messages: P-Ser-HPr interacts with the catabolite control protein A (CcpA), forming a complex that binds to DNA at the catabolite response elements cre, operator sites preceding a large number of catabolite-regulated genes. Thus, P-Ser-HPr is a corepressor in carbon catabolite repression (CCR), a mechanism that allows bacteria to coordinate and optimize the utilization of available carbon sources. P-Ser-HPr also plays a role in inducer exclusion, in which it probably interacts with several non-PTS permeases and inhibits their transport activity (By similarity).
messages: Phosphorylation on Ser-46 inhibits the phosphoryl transfer from enzyme I to HPr.

340047:MCAP RS00340
gene id: 340047:MCAP_RS00340
uniprot id: Q2ST54
names: Similarity
messages: Belongs to the UDPGP type 2 family.

340047:MCAP RS02750
gene id: 340047:MCAP_RS02750
uniprot id: Q2SRU8
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.
messages: This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.

340047:MCAP RS04330
gene id: 340047:MCAP_RS04330
uniprot id: P43045
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03175
gene id: 340047:MCAP_RS03175
uniprot id: Q2SRL4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoglycerate kinase family.
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS02440
gene id: 340047:MCAP_RS02440
uniprot id: Q2SS06
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
messages: Cell membrane
messages: Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system.
messages: The complex is composed of two ATP-binding proteins (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS).

340047:MCAP RS00215
gene id: 340047:MCAP_RS00215
uniprot id: Q2ST77
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS01155
gene id: 340047:MCAP_RS01155
uniprot id: Q49112
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the phosphate acetyltransferase and butyryltransferase family.
messages: Cytoplasm

340047:MCAP RS04040
gene id: 340047:MCAP_RS04040
uniprot id: Q48960
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
messages: Cytoplasm
messages: Specifically methylates the N7 position of a guanine in 16S rRNA.

340047:MCAP RS02890
gene id: 340047:MCAP_RS02890
uniprot id: Q2SRS1
names: Caution
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecU family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

340047:MCAP RS02105
gene id: 340047:MCAP_RS02105
uniprot id: Q2SS72
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

340047:MCAP RS02500
gene id: 340047:MCAP_RS02500
uniprot id: Q2SRZ5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SMC family.
messages: Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures.
messages: Cytoplasm
messages: Homodimer.
messages: Required for chromosome condensation and partitioning.

340047:MCAP RS01955
gene id: 340047:MCAP_RS01955
uniprot id: Q2SS96
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the MraZ family.
messages: Forms oligomers.
messages: nucleoid

340047:MCAP RS00815
gene id: 340047:MCAP_RS00815
uniprot id: Q2SSW2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS02910
gene id: 340047:MCAP_RS02910
uniprot id: Q2SRR7
names: Function
names: Similarity
names: Subunit
messages: Associates with the 50S ribosomal subunit.
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
messages: GTPase that plays an essential role in the late steps of ribosome biogenesis.

340047:MCAP RS01010
gene id: 340047:MCAP_RS01010
uniprot id: Q2SSS6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS04780
gene id: 340047:MCAP_RS04780
uniprot id: Q2SRZ2
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS00580
gene id: 340047:MCAP_RS00580
uniprot id: Q2ST07
names: Function
names: Similarity
messages: Belongs to the NusG family.
messages: Participates in transcription elongation, termination and antitermination.

340047:MCAP RS04125
gene id: 340047:MCAP_RS04125
uniprot id: Q2SR42
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS00075
gene id: 340047:MCAP_RS00075
uniprot id: Q2STA4
names: Function
names: Similarity
messages: Belongs to the thymidylate kinase family.
messages: Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.

340047:MCAP RS02095
gene id: 340047:MCAP_RS02095
uniprot id: Q2SS74
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

340047:MCAP RS00795
gene id: 340047:MCAP_RS00795
uniprot id: Q2SSW5
names: Similarity
messages: Belongs to the peptidase M17 family.

340047:MCAP RS01000
gene id: 340047:MCAP_RS01000
uniprot id: Q2SSS7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.
messages: Membrane

340047:MCAP RS01110
gene id: 340047:MCAP_RS01110
uniprot id: Q2SSQ6
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allosterically activated by ADP and other diphosphonucleosides, and allosterically inhibited by phosphoenolpyruvate.
messages: Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Prokaryotic clade 'B1' sub-subfamily.
messages: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
messages: Cytoplasm
messages: Homotetramer.

340047:MCAP RS00465
gene id: 340047:MCAP_RS00465
uniprot id: Q2ST28
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
messages: Cytoplasm

340047:MCAP RS04610
gene id: 340047:MCAP_RS04610
uniprot id: Q2SRY4
names: Function
names: Similarity
messages: Belongs to the RecO family.
messages: Involved in DNA repair and RecF pathway recombination.

340047:MCAP RS03420
gene id: 340047:MCAP_RS03420
uniprot id: P04448
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL6 family.
messages: Part of the 50S ribosomal subunit.
messages: This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.

340047:MCAP RS00105
gene id: 340047:MCAP_RS00105
uniprot id: Q2ST98
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
messages: Belongs to the AAA ATPase family.
messages: Binds 1 zinc ion per subunit.
messages: Cell membrane
messages: Homohexamer.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the central section; belongs to the AAA ATPase family.

340047:MCAP RS02755
gene id: 340047:MCAP_RS02755
uniprot id: Q2SRU7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RNA methyltransferase TrmD family.
messages: Cytoplasm
messages: Homodimer.
messages: Specifically methylates guanosine-37 in various tRNAs.

340047:MCAP RS03075
gene id: 340047:MCAP_RS03075
uniprot id: Q2SRN5
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the transketolase family.
messages: Binds 1 Mg(2+) ion per subunit. Can also utilize other divalent metal cations, such as Ca(2+), Mn(2+) and Co(2+).
messages: Binds 1 thiamine pyrophosphate per subunit.
messages: Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
messages: Homodimer.

340047:MCAP RS03875
gene id: 340047:MCAP_RS03875
uniprot id: Q2SR90
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ABC transporter superfamily. UvrA family.
messages: Cytoplasm
messages: Forms a heterotetramer with UvrB during the search for lesions.
messages: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.

340047:MCAP RS03890
gene id: 340047:MCAP_RS03890
uniprot id: Q2SR87
names: Similarity
messages: Belongs to the HPrK/P family.

340047:MCAP RS00130
gene id: 340047:MCAP_RS00130
uniprot id: Q2ST93
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Also exhibits azoreductase activity. Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.
messages: Belongs to the azoreductase type 1 family.
messages: Binds 1 FMN per subunit.
messages: Homodimer.
messages: Quinone reductase that provides resistance to thiol-specific stress caused by electrophilic quinones.

340047:MCAP RS00110
gene id: 340047:MCAP_RS00110
uniprot id: Q2ST97
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS04295
gene id: 340047:MCAP_RS04295
uniprot id: Q2SR14
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03840
gene id: 340047:MCAP_RS03840
uniprot id: Q2SR96
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylosuccinate synthetase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.

340047:MCAP RS01875
gene id: 340047:MCAP_RS01875
uniprot id: P71500
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DnaJ family.
messages: Binds 2 Zn(2+) ions per monomer.
messages: Cytoplasm
messages: Homodimer.
messages: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
messages: The J domain is necessary and sufficient to stimulate DnaK ATPase activity. Zinc center 1 plays an important role in the autonomous, DnaK-independent chaperone activity of DnaJ. Zinc center 2 is essential for interaction with DnaK and for DnaJ activity.

340047:MCAP RS03815
gene id: 340047:MCAP_RS03815
uniprot id: Q2SRA2
names: Function
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
messages: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.

340047:MCAP RS03760
gene id: 340047:MCAP_RS03760
uniprot id: Q2SRB3
names: Caution
names: Function
names: Similarity
messages: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
messages: Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

340047:MCAP RS02485
gene id: 340047:MCAP_RS02485
uniprot id: Q2SRZ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ribonuclease III family.
messages: Cytoplasm
messages: Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
messages: Homodimer.

340047:MCAP RS02580
gene id: 340047:MCAP_RS02580
uniprot id: Q2SRX9
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03660
gene id: 340047:MCAP_RS03660
uniprot id: Q2SRC4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS02370
gene id: 340047:MCAP_RS02370
uniprot id: Q2SS20
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily.

340047:MCAP RS03445
gene id: 340047:MCAP_RS03445
uniprot id: P10137
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

340047:MCAP RS03115
gene id: 340047:MCAP_RS03115
uniprot id: Q2SRM6
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.

340047:MCAP RS01015
gene id: 340047:MCAP_RS01015
uniprot id: Q2SSS5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS02220
gene id: 340047:MCAP_RS02220
uniprot id: Q2SS50
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LDH/MDH superfamily. LDH family.
messages: Catalyzes the conversion of lactate to pyruvate.
messages: Cytoplasm
messages: Homotetramer.

340047:MCAP RS02780
gene id: 340047:MCAP_RS02780
uniprot id: Q2SRU2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNase Y family.
messages: Cell membrane
messages: Endoribonuclease that initiates mRNA decay.

340047:MCAP RS01655
gene id: 340047:MCAP_RS01655
uniprot id: Q2SSF2
names: Function
names: Similarity
messages: Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
messages: Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.

340047:MCAP RS00355
gene id: 340047:MCAP_RS00355
uniprot id: Q2ST51
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL10 family.
messages: Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

340047:MCAP RS02690
gene id: 340047:MCAP_RS02690
uniprot id: Q2SRV9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
messages: Cytoplasm
messages: Monomer.

340047:MCAP RS00300
gene id: 340047:MCAP_RS00300
uniprot id: Q2ST61
names: Similarity
messages: Belongs to the XseB family.

340047:MCAP RS03470
gene id: 340047:MCAP_RS03470
uniprot id: P10139
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).

340047:MCAP RS03435
gene id: 340047:MCAP_RS03435
uniprot id: P10136
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

340047:MCAP RS00095
gene id: 340047:MCAP_RS00095
uniprot id: Q2STA0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tRNA(Ile)-lysidine synthase family.
messages: Cytoplasm
messages: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
messages: The N-terminal region contains the highly conserved SGGXDS motif, predicted to be a P-loop motif involved in ATP binding.

340047:MCAP RS00210
gene id: 340047:MCAP_RS00210
uniprot id: Q2ST78
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS00645
gene id: 340047:MCAP_RS00645
uniprot id: Q2SSZ4
names: Similarity
messages: Belongs to the lipase/esterase LIP3/BchO family.

340047:MCAP RS03345
gene id: 340047:MCAP_RS03345
uniprot id: Q2SRI4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the tRNA pseudouridine synthase TruA family.
messages: Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
messages: Homodimer.

340047:MCAP RS03385
gene id: 340047:MCAP_RS03385
uniprot id: Q2SRH5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

340047:MCAP RS03485
gene id: 340047:MCAP_RS03485
uniprot id: P10140
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

340047:MCAP RS02285
gene id: 340047:MCAP_RS02285
uniprot id: Q2SS37
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS04020
gene id: 340047:MCAP_RS04020
uniprot id: Q2SR62
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS02120
gene id: 340047:MCAP_RS02120
uniprot id: Q2SS69
names: Function
names: Similarity
messages: Belongs to the NanE family.
messages: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P).

340047:MCAP RS02545
gene id: 340047:MCAP_RS02545
uniprot id: Q2SRY6
names: Cofactor
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the DnaG primase family.
messages: Binds 1 zinc ion per monomer.
messages: Contains an N-terminal zinc-binding domain, a central core domain that contains the primase activity, and a C-terminal DnaB-binding domain.
messages: Monomer. Interacts with DnaB.
messages: RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.

340047:MCAP RS01880
gene id: 340047:MCAP_RS01880
uniprot id: Q2SSA8
names: Similarity
messages: Belongs to the universal ribosomal protein uS2 family.

340047:MCAP RS01115
gene id: 340047:MCAP_RS01115
uniprot id: Q2SSQ5
names: Similarity
messages: Belongs to the pyruvate kinase family.

340047:MCAP RS00780
gene id: 340047:MCAP_RS00780
uniprot id: Q2SSW8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: Cytoplasm
messages: Monomer.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

340047:MCAP RS04270
gene id: 340047:MCAP_RS04270
uniprot id: Q2SR19
names: Similarity
messages: Belongs to the carbohydrate kinase PfkB family.

340047:MCAP RS01120
gene id: 340047:MCAP_RS01120
uniprot id: Q2SSQ4
names: Caution
names: Cofactor
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.
messages: Binds 1 zinc ion per subunit.
messages: Cytoplasm
messages: Homodimer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

340047:MCAP RS02720
gene id: 340047:MCAP_RS02720
uniprot id: Q2SRV4
names: Similarity
messages: Belongs to the ABC transporter superfamily.

340047:MCAP RS03905
gene id: 340047:MCAP_RS03905
uniprot id: Q2SR84
names: Similarity
messages: Belongs to the Lgt family.

340047:MCAP RS02640
gene id: 340047:MCAP_RS02640
uniprot id: Q2SRW8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MnmA/TRMU family.
messages: Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
messages: Cytoplasm

340047:MCAP RS00250
gene id: 340047:MCAP_RS00250
uniprot id: Q2ST70
names: Similarity
messages: Belongs to the IMPACT family.

340047:MCAP RS02225
gene id: 340047:MCAP_RS02225
uniprot id: Q2SS49
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS03480
gene id: 340047:MCAP_RS03480
uniprot id: P10133
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL2 family.
messages: One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.

340047:MCAP RS03415
gene id: 340047:MCAP_RS03415
uniprot id: P04453
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

340047:MCAP RS03910
gene id: 340047:MCAP_RS03910
uniprot id: Q2SR83
names: Function
names: Similarity
messages: Belongs to the WhiA family.
messages: Involved in cell division and chromosome segregation.

340047:MCAP RS00195
gene id: 340047:MCAP_RS00195
uniprot id: Q2ST80
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.
messages: Cytoplasm
messages: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Monomer.

340047:MCAP RS03550
gene id: 340047:MCAP_RS03550
uniprot id: Q2SRE6
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS04060
gene id: 340047:MCAP_RS04060
uniprot id: Q2SR55
names: Subcellular Location Annotation
messages: Membrane

340047:MCAP RS01705
gene id: 340047:MCAP_RS01705
uniprot id: Q2SSE3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NusA family.
messages: Cytoplasm
messages: Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.
messages: Participates in both transcription termination and antitermination.

340047:MCAP RS03250
gene id: 340047:MCAP_RS03250
uniprot id: Q2SRK1
names: Similarity
messages: Belongs to the Fur family.

340047:MCAP RS03440
gene id: 340047:MCAP_RS03440
uniprot id: P10141
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL24 family.
messages: One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
messages: One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit.

340047:MCAP RS02330
gene id: 340047:MCAP_RS02330
uniprot id: Q2SS28
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

340047:MCAP RS00790
gene id: 340047:MCAP_RS00790
uniprot id: Q2SSW6
names: Similarity
messages: Belongs to the glycosyl hydrolase 31 family.

340047:MCAP RS02905
gene id: 340047:MCAP_RS02905
uniprot id: Q2SRR8
names: Similarity
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.

340047:MCAP RS04140
gene id: 340047:MCAP_RS04140
uniprot id: Q2SR39
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the binding-protein-dependent transport system permease family.
messages: Cell membrane

340047:MCAP RS02740
gene id: 340047:MCAP_RS02740
uniprot id: Q2SRV0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNase HII family.
messages: Cytoplasm
messages: Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
messages: Manganese or magnesium. Binds 1 divalent metal ion per monomer in the absence of substrate. May bind a second metal ion after substrate binding.

340047:MCAP RS02465
gene id: 340047:MCAP_RS02465
uniprot id: Q2SS02
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

340047:MCAP RS03495
gene id: 340047:MCAP_RS03495
uniprot id: P10134
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL3 family.
messages: One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.

340047:MCAP RS01050
gene id: 340047:MCAP_RS01050
uniprot id: Q2SSR8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the guanylate kinase family.
messages: Cytoplasm
messages: Essential for recycling GMP and indirectly, cGMP.

340047:MCAP RS01300
gene id: 340047:MCAP_RS01300
uniprot id: Q2SSM1
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

340047:MCAP RS00535
gene id: 340047:MCAP_RS00535
uniprot id: Q2ST16
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PTH family.
messages: Cytoplasm
messages: Monomer.
messages: The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.

340047:MCAP RS00710
gene id: 340047:MCAP_RS00710
uniprot id: Q2SSY2
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL31 family.

340047:MCAP RS01195
gene id: 340047:MCAP_RS01195
uniprot id: Q2SSP0
names: Function
messages: Component of the dihydroxyacetone kinase complex, which is responsible for the phosphoenolpyruvate (PEP)-dependent phosphorylation of dihydroxyacetone. DhaM serves as the phosphoryl donor. Is phosphorylated by phosphoenolpyruvate in an EI- and HPr-dependent reaction, and a phosphorelay system on histidine residues finally leads to phosphoryl transfer to DhaL and dihydroxyacetone.

340047:MCAP RS02350
gene id: 340047:MCAP_RS02350
uniprot id: Q2SS24
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GPI family.
messages: Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.
messages: Cytoplasm

340047:MCAP RS00545
gene id: 340047:MCAP_RS00545
uniprot id: Q2ST14
names: Function
names: Similarity
messages: Belongs to the helicase family. DnaB subfamily.
messages: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity.

340047:MCAP RS02730
gene id: 340047:MCAP_RS02730
uniprot id: Q2SRV2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0394 family.
messages: Membrane

340047:MCAP RS00395
gene id: 340047:MCAP_RS00395
uniprot id: Q2ST43
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SHMT family.
messages: Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
messages: Cytoplasm
messages: Homodimer.

340047:MCAP RS03330
gene id: 340047:MCAP_RS03330
uniprot id: Q2SRI7
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

340047:MCAP RS02100
gene id: 340047:MCAP_RS02100
uniprot id: Q2SS73
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DapA family. NanA subfamily.
messages: Cytoplasm
messages: Homotetramer.

340047:MCAP RS02885
gene id: 340047:MCAP_RS02885
uniprot id: Q2SRS2
names: Subcellular Location Annotation
messages: Cytoplasm

340047:MCAP RS00320
gene id: 340047:MCAP_RS00320
uniprot id: Q2ST57
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the AP endonuclease 2 family.
messages: Binds 3 Zn(2+) ions.
messages: Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.

340047:MCAP RS04355
gene id: 340047:MCAP_RS04355
uniprot id: P33249
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.