307121:GA0070620 RS14460
gene id: 307121:GA0070620_RS14460
uniprot id: A0A1C3N4C4
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

307121:GA0070620 RS17965
gene id: 307121:GA0070620_RS17965
uniprot id: A0A1C3N685
names: Similarity
messages: Belongs to the GPN-loop GTPase family.

307121:GA0070620 RS00190
gene id: 307121:GA0070620_RS00190
uniprot id: A0A1C3MWB5
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the urease gamma subunit family.
messages: Cytoplasm
messages: Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme.

307121:GA0070620 RS25585
gene id: 307121:GA0070620_RS25585
uniprot id: A0A1C3NAF8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

307121:GA0070620 RS29255
gene id: 307121:GA0070620_RS29255
uniprot id: A0A1C3NCI9
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.
messages: 4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.
messages: Cytoplasm

307121:GA0070620 RS25450
gene id: 307121:GA0070620_RS25450
uniprot id: A0A1C3NAG2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS7 family.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
messages: Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.

307121:GA0070620 RS25505
gene id: 307121:GA0070620_RS25505
uniprot id: A0A1C3NAG8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

307121:GA0070620 RS10910
gene id: 307121:GA0070620_RS10910
uniprot id: A0A1C3N2B3
names: Subcellular Location Annotation
messages: Cytoplasm

307121:GA0070620 RS22235
gene id: 307121:GA0070620_RS22235
uniprot id: A0A1C3N8K7
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

307121:GA0070620 RS10420
gene id: 307121:GA0070620_RS10420
uniprot id: A0A1C3N1Z4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

307121:GA0070620 RS10295
gene id: 307121:GA0070620_RS10295
uniprot id: A0A1C3N1Y2
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

307121:GA0070620 RS25600
gene id: 307121:GA0070620_RS25600
uniprot id: A0A1C3NAI6
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS11 family.
messages: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
messages: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3.

307121:GA0070620 RS16780
gene id: 307121:GA0070620_RS16780
uniprot id: A0A1C3N5J5
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional regulator. Probably redox-responsive. The apo- but not holo-form probably binds DNA.
messages: Belongs to the WhiB family.
messages: Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.
messages: Cytoplasm
messages: The Fe-S cluster can be nitrosylated by nitric oxide (NO).
messages: Upon Fe-S cluster removal intramolecular disulfide bonds are formed.

307121:GA0070620 RS13875
gene id: 307121:GA0070620_RS13875
uniprot id: A0A1C3N408
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

307121:GA0070620 RS07855
gene id: 307121:GA0070620_RS07855
uniprot id: A0A1C3N0H9
names: Domain
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the prokaryotic ubiquitin-like protein family.
messages: Is modified by deamidation of its C-terminal glutamine to glutamate by the deamidase Dop, a prerequisite to the subsequent pupylation process.
messages: Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation.
messages: Strongly interacts with the proteasome-associated ATPase ARC through a hydrophobic interface; the interacting region of Pup lies in its C-terminal half. There is one Pup binding site per ARC hexamer ring.
messages: The N-terminal unstructured half of Pup provides a signal required to initiate unfolding and degradation by the proteasome but is not needed for pupylation, while the C-terminal helical half of Pup interacts with ARC to target proteins to the proteasome.

307121:GA0070620 RS18385
gene id: 307121:GA0070620_RS18385
uniprot id: A0A1C3N6H6
names: Similarity
messages: Belongs to the thioredoxin family.

307121:GA0070620 RS25510
gene id: 307121:GA0070620_RS25510
uniprot id: A0A1C3NAG7
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

307121:GA0070620 RS25595
gene id: 307121:GA0070620_RS25595
uniprot id: A0A1C3NAJ3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

307121:GA0070620 RS25535
gene id: 307121:GA0070620_RS25535
uniprot id: A0A1C3NAG4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

307121:GA0070620 RS05635
gene id: 307121:GA0070620_RS05635
uniprot id: A0A1C3MZD7
names: Caution
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase-binding protein RbpA family.
messages: Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
messages: Forms a complex with the RNAP catalytic core and with free principal sigma factors.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

307121:GA0070620 RS28310
gene id: 307121:GA0070620_RS28310
uniprot id: A0A1C3NC03
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

307121:GA0070620 RS25480
gene id: 307121:GA0070620_RS25480
uniprot id: A0A1C3NAC8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

307121:GA0070620 RS26445
gene id: 307121:GA0070620_RS26445
uniprot id: A0A1C3NAX6
names: Cofactor
names: Function
messages: Binds 1 [3Fe-4S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

307121:GA0070620 RS31035
gene id: 307121:GA0070620_RS31035
uniprot id: A0A1C3NDJ5
names: Subcellular Location Annotation
messages: Cytoplasm

307121:GA0070620 RS25445
gene id: 307121:GA0070620_RS25445
uniprot id: A0A1C3NAG0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

307121:GA0070620 RS25560
gene id: 307121:GA0070620_RS25560
uniprot id: A0A1C3NAH7
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL30 family.
messages: Part of the 50S ribosomal subunit.

307121:GA0070620 RS22245
gene id: 307121:GA0070620_RS22245
uniprot id: A0A1C3N8Q3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

307121:GA0070620 RS25365
gene id: 307121:GA0070620_RS25365
uniprot id: A0A1C3NAG6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

307121:GA0070620 RS25520
gene id: 307121:GA0070620_RS25520
uniprot id: A0A1C3NAK0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

307121:GA0070620 RS26835
gene id: 307121:GA0070620_RS26835
uniprot id: A0A1C3NB53
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional regulator. Probably redox-responsive. The apo- but not holo-form probably binds DNA.
messages: Belongs to the WhiB family.
messages: Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.
messages: Cytoplasm
messages: The Fe-S cluster can be nitrosylated by nitric oxide (NO).
messages: Upon Fe-S cluster removal intramolecular disulfide bonds are formed.

307121:GA0070620 RS10300
gene id: 307121:GA0070620_RS10300
uniprot id: A0A1C3N1Y4
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

307121:GA0070620 RS25465
gene id: 307121:GA0070620_RS25465
uniprot id: A0A1C3NAD7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.