3055:CHLRE 12g559150v5
gene id: 3055:CHLRE_12g559150v5
uniprot id: A8JGV8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ClpS family.
messages: Small adapter protein that modulate the activity of plastid Clp protease system (CLPC) (By similarity). Probably involved in substrate selection for plastid CLPC (By similarity).
messages: chloroplast stroma

3055:CHLRE 03g172650v5
gene id: 3055:CHLRE_03g172650v5
uniprot id: Q8LRU3
names: Similarity
messages: Belongs to the tubulin family.

3055:CHLRE 13g591900v5
gene id: 3055:CHLRE_13g591900v5
uniprot id: A8IW99
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phospholipase D family. MitoPLD/Zucchini subfamily.
messages: Homodimer.
messages: In contrast to other members of the phospholipase D family, contains only one PLD phosphodiesterase domain, suggesting that it has a single half-catalytic and requires homodimerization to form a complete active site.
messages: Mitochondrion outer membrane
messages: Plays a critical role in PIWI-interacting RNA (piRNA) biogenesis (By similarity). piRNAs provide essential protection against the activity of mobile genetic elements. piRNA-mediated transposon silencing is thus critical for maintaining genome stability. Backbone-non-specific, single strand-specific nuclease, cleaving either RNA or DNA substrates with similar affinity (By similarity). Produces 5' phosphate and 3' hydroxyl termini, suggesting it could directly participate in the processing of primary piRNA transcripts (By similarity). Has been proposed to act as a cardiolipin hydrolase to generate phosphatidic acid at mitochondrial surface. Although it cannot be excluded that it can act as a phospholipase in some circumstances, this activity could not be confirmed (By similarity).

3055:CHLRE 17g708100v5
gene id: 3055:CHLRE_17g708100v5
uniprot id: A8IR93
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

3055:CHLRE 06g263850v5
gene id: 3055:CHLRE_06g263850v5
uniprot id: Q7XJ66
names: Subcellular Location Annotation
messages: Membrane
messages: chloroplast membrane

3055:CHLRE 02g087700v5
gene id: 3055:CHLRE_02g087700v5
uniprot id: O49822
names: Similarity
messages: Belongs to the peroxidase family. Ascorbate peroxidase subfamily.

3055:CHLRE 12g507450v5
gene id: 3055:CHLRE_12g507450v5
uniprot id: A8IK60
names: Similarity
messages: Belongs to the syntaxin family.

3055:CHLRE 02g080900v5
gene id: 3055:CHLRE_02g080900v5
uniprot id: A8I7V2
names: Similarity
messages: Belongs to the peroxiredoxin family. Prx5 subfamily.

3055:CHLRE 12g534600v5
gene id: 3055:CHLRE_12g534600v5
uniprot id: A8IVN6
names: Function
names: Similarity
messages: Belongs to the Tom20 family.
messages: Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore.

3055:CHLRE 16g691215v5
gene id: 3055:CHLRE_16g691215v5
uniprot id: A8JAF5
names: Similarity
messages: Belongs to the OPI10 family.

3055:CHLRE 07g325712v5
gene id: 3055:CHLRE_07g325712v5
uniprot id: A8JH29
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL24 family.

3055:CHLRE 11g481450v5
gene id: 3055:CHLRE_11g481450v5
uniprot id: A0A2K3D8S8
uniprot id: A8J785
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase B chain family.
messages: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: In plastids the F-type ATPase is also known as CF(1)CF(0).
messages: Membrane
messages: chloroplast thylakoid membrane

3055:CHLRE 09g416800v5
gene id: 3055:CHLRE_09g416800v5
uniprot id: A8J525
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plastid outer envelope porin OEP21 (TC 1.B.29) family.
messages: Membrane
messages: Voltage-dependent rectifying anion channel that facilitates the translocation between chloroplast and cytoplasm of phosphorylated carbohydrates such as triosephosphate, 3-phosphoglycerate and inorganic phosphate (Pi) depending of ATP to triosephosphate ratio in the plastidial intermembrane space; in high triosephosphate/ATP conditions (e.g. photosynthesis), export of triosphosphate from chloroplast (outward rectifying channels), but in high ATP/triosephosphate conditions (e.g. dark phase), import of phosphosolutes (inward rectifying channels).
messages: chloroplast outer membrane
messages: etioplast membrane

3055:CHLRE 02g077100v5
gene id: 3055:CHLRE_02g077100v5
uniprot id: A8IA77
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the carboxylate-amine ligase family. Glutamate--cysteine ligase type 2 subfamily.
messages: Homodimer or monomer when oxidized or reduced, respectively.
messages: chloroplast

3055:CHLRE 17g710150v5
gene id: 3055:CHLRE_17g710150v5
uniprot id: A8IR41
names: Similarity
messages: Belongs to the AAA ATPase family.

3055:CHLRE 12g494450v5
gene id: 3055:CHLRE_12g494450v5
uniprot id: A8JDN8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS16 family.

3055:CHLRE 06g264300v5
gene id: 3055:CHLRE_06g264300v5
uniprot id: A8HWZ8
names: Similarity
messages: Belongs to the universal ribosomal protein uS15 family.

3055:CHLRE 12g498250v5
gene id: 3055:CHLRE_12g498250v5
uniprot id: A8JGK1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS17 family.

3055:CHLRE 16g672600v5
gene id: 3055:CHLRE_16g672600v5
uniprot id: A8J3F6
names: Disruption Phenotype
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Dynein axonemal particle
messages: Interacts with PIH1D1; the interaction associates DNAAF10 with the R2TP complex (Probable). Interacts with several dynein axonemal assembly factors (PubMed:30428028).
messages: Key assembly factor specifically required for the stability of axonemal dynein heavy chains in cytoplasm.
messages: Mutants show ciliary loss with disappearance of axonemal dynein arms and diminishment of dynein arm heavy chains in the cytoplasm. They have reduced beat frequency and dyskinetic motion of the remaining ventral cilia.

3055:CHLRE 03g169400v5
gene id: 3055:CHLRE_03g169400v5
uniprot id: A8IEW6
names: Function
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.
messages: Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

3055:CHLRE 07g330700v5
gene id: 3055:CHLRE_07g330700v5
uniprot id: A8IH47
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As component of a spoke-associated complex, regulates flagellar dynein activity by mediating regulatory signals between the radial spokes and dynein arms.
messages: Belongs to the CFAP91 family.
messages: Identified in a spoke-associated complex containing CFAP61, CFAP91 and CFAP251; the complex is associated with the radial spokes of the axoneme (PubMed:17967944). The complex associates with Calmodulin; the association is calcium sensitive (PubMed:17967944). Interacts with RSP3 (PubMed:17967944).
messages: flagellum axoneme

3055:CHLRE 11g480150v5
gene id: 3055:CHLRE_11g480150v5
uniprot id: A8J768
uniprot id: P46295
names: Similarity
messages: Belongs to the universal ribosomal protein uS11 family.

3055:CHLRE 09g397697v5
gene id: 3055:CHLRE_09g397697v5
uniprot id: A8J0I0
names: Similarity
messages: Belongs to the universal ribosomal protein uL4 family.

3055:CHLRE 01g005150v5
gene id: 3055:CHLRE_01g005150v5
uniprot id: A8JFY9
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.

3055:CHLRE 12g495951v5
gene id: 3055:CHLRE_12g495951v5
uniprot id: A8JDL5
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 11g476376v5
gene id: 3055:CHLRE_11g476376v5
uniprot id: A8J6X7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PCDP1 family.
messages: Cytoplasm
messages: Interacts with calmodulin; calcium-dependent. Part of the PDCP1 complex composed of CFAP46, CFAP54, CFAP74 and CFAP221; the PDCP1 complex binds calmodulin.
messages: May play a role in cilium morphogenesis.
messages: cilium axoneme

3055:CHLRE 01g030050v5
gene id: 3055:CHLRE_01g030050v5
uniprot id: A8HQG3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

3055:CHLRE 09g415750v5
gene id: 3055:CHLRE_09g415750v5
uniprot id: A8J4Z9
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 12g514650v5
gene id: 3055:CHLRE_12g514650v5
uniprot id: Q6UPR0
names: Similarity
messages: Belongs to the IFT57 family.

3055:CHLRE 13g605650v5
gene id: 3055:CHLRE_13g605650v5
uniprot id: A8JAX9
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

3055:CHLRE 03g193950v5
gene id: 3055:CHLRE_03g193950v5
uniprot id: A8IWK2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ferredoxin thioredoxin reductase beta subunit family.
messages: Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
messages: Heterodimer of subunit A (variable subunit) and subunit B (catalytic subunit). Heterodimeric FTR forms a complex with ferredoxin and thioredoxin.

3055:CHLRE 17g726650v5
gene id: 3055:CHLRE_17g726650v5
uniprot id: A8J6Q5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NOP16 family.
messages: nucleolus

3055:CHLRE 03g165650v5
gene id: 3055:CHLRE_03g165650v5
uniprot id: A8IFE6
names: Similarity
messages: Belongs to the TRAPP small subunits family. Sedlin subfamily.

3055:CHLRE 02g118500v5
gene id: 3055:CHLRE_02g118500v5
uniprot id: A8JGS8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat COPB2 family.
messages: COPI-coated vesicle membrane
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3055:CHLRE 17g730250v5
gene id: 3055:CHLRE_17g730250v5
uniprot id: A8JFH5
names: Similarity
messages: Belongs to the PITHD1 family.

3055:CHLRE 02g110450v5
gene id: 3055:CHLRE_02g110450v5
uniprot id: A8I3E4
names: Similarity
messages: Belongs to the PITHD1 family.

3055:CHLRE 11g467770v5
gene id: 3055:CHLRE_11g467770v5
uniprot id: A8JC04
names: Similarity
names: Subunit
messages: Belongs to the phosphoglycerate kinase family.
messages: Monomer.

3055:CHLRE 06g263450v5
gene id: 3055:CHLRE_06g263450v5
uniprot id: A8HX38
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
messages: chloroplast

3055:CHLRE 10g461250v5
gene id: 3055:CHLRE_10g461250v5
uniprot id: A8I175
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Cytoplasm
messages: Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seems to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin.

3055:CHLRE 05g240850v5
gene id: 3055:CHLRE_05g240850v5
uniprot id: A8J841
names: Function
messages: Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.

3055:CHLRE 08g358528v5
gene id: 3055:CHLRE_08g358528v5
uniprot id: A8JID5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP157 family.
messages: flagellum

3055:CHLRE 12g511900v5
gene id: 3055:CHLRE_12g511900v5
uniprot id: A8IKW6
names: Cofactor
names: Similarity
messages: Belongs to the ribulose-phosphate 3-epimerase family.
messages: Binds 1 divalent metal cation per subunit.

3055:CHLRE 16g669950v5
gene id: 3055:CHLRE_16g669950v5
uniprot id: A8JB53
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ALG14 family.
messages: Membrane
messages: Nucleus membrane

3055:CHLRE 01g062172v5
gene id: 3055:CHLRE_01g062172v5
uniprot id: A8JCT1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 08g364800v5
gene id: 3055:CHLRE_08g364800v5
uniprot id: A8J3Y6
names: Similarity
messages: In the N-terminal section; belongs to the FGAMS family.

3055:CHLRE 03g162000v5
gene id: 3055:CHLRE_03g162000v5
uniprot id: A8IFX8
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 10g432850v5
gene id: 3055:CHLRE_10g432850v5
uniprot id: A8IB22
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP77 family.
messages: flagellum

3055:CHLRE 16g664550v5
gene id: 3055:CHLRE_16g664550v5
uniprot id: Q8W4V3
names: Function
names: Similarity
messages: Belongs to the SHMT family.
messages: Interconversion of serine and glycine.

3055:CHLRE 16g682587v5
gene id: 3055:CHLRE_16g682587v5
uniprot id: A8JA98
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CMC family.
messages: Mitochondrion

3055:CHLRE 07g334800v5
gene id: 3055:CHLRE_07g334800v5
uniprot id: Q2HZ23
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: chloroplast

3055:CHLRE 02g073700v5
gene id: 3055:CHLRE_02g073700v5
uniprot id: A8I9S9
names: Function
names: Similarity
names: Subunit
messages: Belongs to the uroporphyrinogen decarboxylase family.
messages: Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
messages: Homodimer.

3055:CHLRE 17g706650v5
gene id: 3055:CHLRE_17g706650v5
uniprot id: A8IRC0
names: Similarity
messages: Belongs to the SNF8 family.

3055:CHLRE 17g713950v5
gene id: 3055:CHLRE_17g713950v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 03g144807v5
gene id: 3055:CHLRE_03g144807v5
uniprot id: Q6X898
names: Similarity
messages: Belongs to the malate synthase family.

3055:CHLRE 06g261650v5
gene id: 3055:CHLRE_06g261650v5
uniprot id: A8HXD3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the prefoldin subunit alpha family.
messages: Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.
messages: Heterohexamer of two PFD-alpha type and four PFD-beta type subunits.

3055:CHLRE 07g343700v5
gene id: 3055:CHLRE_07g343700v5
uniprot id: A8ITS8
names: Similarity
messages: Belongs to the 2-oxoacid dehydrogenase family.

3055:CHLRE 06g268100v5
gene id: 3055:CHLRE_06g268100v5
uniprot id: A8HV98
uniprot id: P54347
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 12g508500v5
gene id: 3055:CHLRE_12g508500v5
uniprot id: A8IKB4
names: Similarity
messages: Belongs to the peptidase M20A family.

3055:CHLRE 16g676645v5
gene id: 3055:CHLRE_16g676645v5
uniprot id: A8J3A0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DRC8 family.
messages: Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:23427265, PubMed:25411337).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:23427265, PubMed:25411337).
messages: flagellum axoneme

3055:CHLRE 08g382850v5
gene id: 3055:CHLRE_08g382850v5
uniprot id: A8IZ28
names: Similarity
messages: Belongs to the complex I LYR family.

3055:CHLRE 06g263050v5
gene id: 3055:CHLRE_06g263050v5
uniprot id: A8HX63
names: Similarity
names: Subunit
messages: Belongs to the elongation factor P family.
messages: Part of the 50S ribosomal subunit.

3055:CHLRE 10g459750v5
gene id: 3055:CHLRE_10g459750v5
uniprot id: Q6QIV4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA1 subunit family.
messages: Mitochondrion inner membrane

3055:CHLRE 03g205050v5
gene id: 3055:CHLRE_03g205050v5
uniprot id: A8IXB2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the diacylglycerol acyltransferase family.
messages: Endoplasmic reticulum membrane

3055:CHLRE 17g726500v5
gene id: 3055:CHLRE_17g726500v5
uniprot id: A8J6Q4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ORC4 family.
messages: Nucleus

3055:CHLRE 16g654300v5
gene id: 3055:CHLRE_16g654300v5
uniprot id: Q69B19
names: Similarity
messages: Belongs to the NDK family.

3055:CHLRE 16g664600v5
gene id: 3055:CHLRE_16g664600v5
uniprot id: Q6UP32
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I NDUFA13 subunit family.
messages: Complex I functions in the transfer of electrons from NADH to the respiratory chain. Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis.
messages: Mitochondrion inner membrane

3055:CHLRE 09g395950v5
gene id: 3055:CHLRE_09g395950v5
uniprot id: O65000
names: Cofactor
names: Similarity
messages: Belongs to the alternative oxidase family.
messages: Binds 2 iron ions per subunit.

3055:CHLRE 02g079300v5
gene id: 3055:CHLRE_02g079300v5
uniprot id: A8IAJ1
names: Similarity
messages: Belongs to the AAA ATPase family.

3055:CHLRE 09g416200v5
gene id: 3055:CHLRE_09g416200v5
uniprot id: Q9FNS4
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Involved, directly or indirectly, in the processing of the chloroplast encoded psbB mRNA to its mature form, acting via the 5'-UTR of the psbB mRNA.
messages: Part of a 300 kDa complex that associates with RNA.
messages: chloroplast stroma

3055:CHLRE 16g671350v5
gene id: 3055:CHLRE_16g671350v5
uniprot id: Q9ATG5
names: Cofactor
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sulfatase family.
messages: Binds 1 Ca(2+) ion per subunit.
messages: Periplasm
messages: The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.

3055:CHLRE 07g325740v5
gene id: 3055:CHLRE_07g325740v5
uniprot id: A8JH07
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
messages: Membrane
messages: Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport.

3055:CHLRE 03g158800v5
gene id: 3055:CHLRE_03g158800v5
uniprot id: A8J7F8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the esterase D family.
messages: Cytoplasm
messages: Serine hydrolase involved in the detoxification of formaldehyde.

3055:CHLRE 13g569950v5
gene id: 3055:CHLRE_13g569950v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 02g076400v5
gene id: 3055:CHLRE_02g076400v5
uniprot id: A8IA47
names: Similarity
messages: Belongs to the VPS25 family.

3055:CHLRE 06g260850v5
gene id: 3055:CHLRE_06g260850v5
uniprot id: A8HXG8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NOP14 family.
messages: Involved in nucleolar processing of pre-18S ribosomal RNA. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm.
messages: nucleolus

3055:CHLRE 05g240550v5
gene id: 3055:CHLRE_05g240550v5
uniprot id: Q8L439
names: Similarity
messages: Belongs to the EMC8/EMC9 family.

3055:CHLRE 01g027000v5
gene id: 3055:CHLRE_01g027000v5
uniprot id: A8HQ81
names: Similarity
messages: Belongs to the universal ribosomal protein uL5 family.

3055:CHLRE 12g504600v5
gene id: 3055:CHLRE_12g504600v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 09g388000v5
gene id: 3055:CHLRE_09g388000v5
uniprot id: A8IZJ9
names: Similarity
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.

3055:CHLRE 02g095000v5
gene id: 3055:CHLRE_02g095000v5
uniprot id: A8I2I2
names: Subcellular Location Annotation
messages: Secreted

3055:CHLRE 11g476750v5
gene id: 3055:CHLRE_11g476750v5
uniprot id: A8J6Y8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ferredoxin--NADP reductase type 1 family.
messages: chloroplast

3055:CHLRE 02g093450v5
gene id: 3055:CHLRE_02g093450v5
uniprot id: A8I9H5
names: Similarity
messages: Belongs to the class I fructose-bisphosphate aldolase family.

3055:CHLRE 12g494050v5
gene id: 3055:CHLRE_12g494050v5
uniprot id: A8JDP4
names: Similarity
messages: Belongs to the universal ribosomal protein uL6 family.

3055:CHLRE 03g180850v5
gene id: 3055:CHLRE_03g180850v5
uniprot id: A8JH39
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEC23/SEC24 family. SEC23 subfamily.
messages: COPII-coated vesicle membrane
messages: Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 16g665800v5
gene id: 3055:CHLRE_16g665800v5
uniprot id: O64927
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
messages: amyloplast
messages: chloroplast

3055:CHLRE 16g672800v5
gene id: 3055:CHLRE_16g672800v5
uniprot id: A8J3F9
names: Similarity
messages: Belongs to the transferase hexapeptide repeat family.

3055:CHLRE 01g025000v5
gene id: 3055:CHLRE_01g025000v5
uniprot id: A8HQ39
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Orai family.
messages: Membrane

3055:CHLRE 11g467616v5
gene id: 3055:CHLRE_11g467616v5
uniprot id: A8JA42
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IFT56 family.
messages: Component of the IFT complex B.
messages: Component of the intraflagellar transport (IFT) complex B required for transport of proteins in the motile cilium. Required for transport of specific ciliary cargo proteins related to motility, while it is neither required for IFT complex B assembly or motion nor for cilium assembly.
messages: Flagella motility defects.
messages: flagellum

3055:CHLRE 04g223050v5
gene id: 3055:CHLRE_04g223050v5
uniprot id: A8IT00
uniprot id: P24258
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Expressed under high-CO2 condition.
messages: Periplasm
messages: Reversible hydration of carbon dioxide.
messages: Tetramer of two large and two small subunits linked by two disulfide bonds.

3055:CHLRE 12g523500v5
gene id: 3055:CHLRE_12g523500v5
uniprot id: A8J5Q5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the derlin family.
messages: Endoplasmic reticulum membrane
messages: May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins.
messages: May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins.
messages: Membrane

3055:CHLRE 02g076750v5
gene id: 3055:CHLRE_02g076750v5
uniprot id: A8IA65
names: Similarity
messages: Belongs to the CIA30 family.

3055:CHLRE 16g663900v5
gene id: 3055:CHLRE_16g663900v5
uniprot id: A8JFB1
names: Similarity
messages: Belongs to the HMBS family.

3055:CHLRE 12g522550v5
gene id: 3055:CHLRE_12g522550v5
uniprot id: A7LGV1
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

3055:CHLRE 12g556300v5
gene id: 3055:CHLRE_12g556300v5
uniprot id: A8IYS6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP300 family.
messages: Cilium- and flagellum-specific protein that plays a role in axonemal structure organization and motility. Plays a role in outer and inner dynein arm assembly.
messages: Cytoplasm
messages: flagellum axoneme

3055:CHLRE 10g458450v5
gene id: 3055:CHLRE_10g458450v5
uniprot id: O22448
names: Similarity
messages: Belongs to the glutathione peroxidase family.

3055:CHLRE 06g272850v5
gene id: 3055:CHLRE_06g272850v5
uniprot id: A8HVP7
names: Similarity
messages: Belongs to the universal ribosomal protein uL10 family.

3055:CHLRE 06g294800v5
gene id: 3055:CHLRE_06g294800v5
uniprot id: A8JFI9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM19 family.
messages: Membrane

3055:CHLRE 16g666100v5
gene id: 3055:CHLRE_16g666100v5
uniprot id: A8JF71
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TtcA family. CTU1/NCS6/ATPBD3 subfamily.
messages: Cytoplasm
messages: Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.

3055:CHLRE 03g205250v5
gene id: 3055:CHLRE_03g205250v5
uniprot id: A8IXA7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Membrane

3055:CHLRE 12g487850v5
gene id: 3055:CHLRE_12g487850v5
uniprot id: A8ILA3
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3055:CHLRE 14g625400v5
gene id: 3055:CHLRE_14g625400v5
uniprot id: A8IV67
names: Similarity
messages: Belongs to the AAA ATPase family.

3055:CHLRE 12g520600v5
gene id: 3055:CHLRE_12g520600v5
uniprot id: A8J5Y7
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.

3055:CHLRE 01g055420v5
gene id: 3055:CHLRE_01g055420v5
uniprot id: A8JCR1
names: Function
names: Similarity
messages: Belongs to the phosphatase 2A regulatory subunit B family.
messages: The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment.

3055:CHLRE 14g630100v5
gene id: 3055:CHLRE_14g630100v5
uniprot id: A8IUV7
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL13 family.

3055:CHLRE 07g347100v5
gene id: 3055:CHLRE_07g347100v5
uniprot id: A8ITZ0
names: Similarity
messages: Belongs to the glucose-6-phosphate 1-epimerase family.

3055:CHLRE 01g036050v5
gene id: 3055:CHLRE_01g036050v5
uniprot id: A8HM54
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DNA mismatch repair MutL/HexB family.
messages: Nucleus

3055:CHLRE 02g092350v5
gene id: 3055:CHLRE_02g092350v5
uniprot id: A8I9D0
names: Similarity
messages: Belongs to the cytochrome P450 family.

3055:CHLRE 02g141400v5
gene id: 3055:CHLRE_02g141400v5
uniprot id: A8J0N7
names: Similarity
messages: Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.

3055:CHLRE 06g272050v5
gene id: 3055:CHLRE_06g272050v5
uniprot id: A8HVU5
names: Similarity
messages: Belongs to the BPG-independent phosphoglycerate mutase family.

3055:CHLRE 06g299750v5
gene id: 3055:CHLRE_06g299750v5
uniprot id: A8INW7
names: Similarity
messages: Belongs to the YOS1 family.

3055:CHLRE 10g439400v5
gene id: 3055:CHLRE_10g439400v5
uniprot id: A8IIN4
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
messages: Belongs to the amidase family. GatA subfamily.
messages: Mitochondrion
messages: Subunit of the heterotrimeric GatCAB amidotransferase (AdT) complex, composed of A, B and C subunits.
messages: This protein may be expected to contain an N-terminal transit peptide but none has been predicted.
messages: chloroplast stroma

3055:CHLRE 12g504650v5
gene id: 3055:CHLRE_12g504650v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 01g007051v5
gene id: 3055:CHLRE_01g007051v5
uniprot id: A8JCX9
uniprot id: P0CH10
uniprot id: P0CH11
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Component of the 60S subunit of the ribosome.
messages: Cytoplasm
messages: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degradation via the proteasome. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity).
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eL40 family.
messages: In the N-terminal section; belongs to the ubiquitin family.
messages: Nucleus
messages: Ribosomal protein L40 is part of the 60S ribosomal subunit.

3055:CHLRE 16g678100v5
gene id: 3055:CHLRE_16g678100v5
uniprot id: A8J3R6
names: Function
names: Similarity
messages: Belongs to the VPS28 family.
messages: Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.

3055:CHLRE 06g291200v5
gene id: 3055:CHLRE_06g291200v5
uniprot id: A8J2I9
names: Similarity
messages: Belongs to the EAF6 family.

3055:CHLRE 07g332550v5
gene id: 3055:CHLRE_07g332550v5
uniprot id: A8IGT6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A22B family.
messages: Membrane

3055:CHLRE 03g178450v5
gene id: 3055:CHLRE_03g178450v5
uniprot id: A8IDN1
names: Similarity
messages: Belongs to the GroES chaperonin family.

3055:CHLRE 02g080700v5
gene id: 3055:CHLRE_02g080700v5
uniprot id: A8I7T8
names: Similarity
messages: Belongs to the heat shock protein 70 family.

3055:CHLRE 01g035450v5
gene id: 3055:CHLRE_01g035450v5
uniprot id: A8HM37
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

3055:CHLRE 02g096150v5
gene id: 3055:CHLRE_02g096150v5
uniprot id: A8I2E0
uniprot id: Q42684
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Binds 1 Mn(2+) ion per subunit.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
messages: Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
messages: Homotetramer.
messages: Mitochondrion matrix

3055:CHLRE 06g256200v5
gene id: 3055:CHLRE_06g256200v5
uniprot id: A8HY46
names: Similarity
messages: Belongs to the acetyltransferase family. GCN5 subfamily.

3055:CHLRE 01g018800v5
gene id: 3055:CHLRE_01g018800v5
uniprot id: Q8RVB8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase A chain family.
messages: Membrane

3055:CHLRE 01g069107v5
gene id: 3055:CHLRE_01g069107v5
uniprot id: A8JCU9
names: Similarity
messages: Belongs to the PET191 family.

3055:CHLRE 14g610950v5
gene id: 3055:CHLRE_14g610950v5
uniprot id: A8JAI8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1B family.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: Nucleus

3055:CHLRE 01g055050v5
gene id: 3055:CHLRE_01g055050v5
uniprot id: A8JCQ0
names: Similarity
messages: Belongs to the peptidase C48 family.

3055:CHLRE 03g166050v5
gene id: 3055:CHLRE_03g166050v5
uniprot id: A8IFC8
names: Similarity
messages: Belongs to the selenium-binding protein family.

3055:CHLRE 02g106600v5
gene id: 3055:CHLRE_02g106600v5
uniprot id: A8I403
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS19 family.

3055:CHLRE 17g723650v5
gene id: 3055:CHLRE_17g723650v5
uniprot id: A8J6J6
names: Similarity
messages: Belongs to the thiolase-like superfamily. Thiolase family.

3055:CHLRE 03g160200v5
gene id: 3055:CHLRE_03g160200v5
uniprot id: A8J7D3
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3055:CHLRE 04g224750v5
gene id: 3055:CHLRE_04g224750v5
uniprot id: A8IT48
names: Similarity
messages: Belongs to the synaptobrevin family.

3055:CHLRE 16g651750v5
gene id: 3055:CHLRE_16g651750v5
uniprot id: A8J9F3
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.

3055:CHLRE 12g521350v5
gene id: 3055:CHLRE_12g521350v5
uniprot id: A8J5W3
names: Similarity
messages: Belongs to the STXBP/unc-18/SEC1 family.

3055:CHLRE 02g108850v5
gene id: 3055:CHLRE_02g108850v5
uniprot id: A8I3M4
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL17 family.

3055:CHLRE 03g164600v5
gene id: 3055:CHLRE_03g164600v5
uniprot id: A8IFK0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Cell membrane

3055:CHLRE 10g425900v5
gene id: 3055:CHLRE_10g425900v5
uniprot id: Q75VY8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 06g273900v5
gene id: 3055:CHLRE_06g273900v5
uniprot id: Q42680
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g294850v5
gene id: 3055:CHLRE_06g294850v5
uniprot id: A8JFI8
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 12g508750v5
gene id: 3055:CHLRE_12g508750v5
uniprot id: A8IKC8
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 06g274350v5
gene id: 3055:CHLRE_06g274350v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 01g033550v5
gene id: 3055:CHLRE_01g033550v5
uniprot id: A8HQT1
names: Similarity
messages: Belongs to the protein disulfide isomerase family.

3055:CHLRE 10g455300v5
gene id: 3055:CHLRE_10g455300v5
uniprot id: A8I0E2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP core protein family.
messages: Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
messages: Nucleus
messages: cytosol

3055:CHLRE 01g006950v5
gene id: 3055:CHLRE_01g006950v5
uniprot id: A8JCY4
names: Similarity
messages: Belongs to the class I fructose-bisphosphate aldolase family.

3055:CHLRE 09g405750v5
gene id: 3055:CHLRE_09g405750v5
uniprot id: A7UCH9
names: Function
names: Similarity
messages: Belongs to the beta-class carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.

3055:CHLRE 03g181300v5
gene id: 3055:CHLRE_03g181300v5
uniprot id: A8JH48
names: Similarity
messages: Belongs to the EPSP synthase family.

3055:CHLRE 16g651000v5
gene id: 3055:CHLRE_16g651000v5
uniprot id: A8J9G7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the replication factor A protein 1 family.
messages: Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
messages: Heterotrimer of RPA1, RPA2 and RPA3 (canonical replication protein A complex).
messages: Nucleus

3055:CHLRE 06g292550v5
gene id: 3055:CHLRE_06g292550v5
uniprot id: Q9XGU3
names: Similarity
messages: Belongs to the PPP phosphatase family.

3055:CHLRE 17g726300v5
gene id: 3055:CHLRE_17g726300v5
uniprot id: A8J6P9
names: Similarity
messages: Belongs to the universal ribosomal protein uS14 family.

3055:CHLRE 06g300800v5
gene id: 3055:CHLRE_06g300800v5
uniprot id: A8INR7
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

3055:CHLRE 17g727300v5
gene id: 3055:CHLRE_17g727300v5
uniprot id: A8J6R7
names: Similarity
messages: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.

3055:CHLRE 01g030250v5
gene id: 3055:CHLRE_01g030250v5
uniprot id: A8HQG9
names: Similarity
messages: Belongs to the inositol monophosphatase superfamily.

3055:CHLRE 13g577100v5
gene id: 3055:CHLRE_13g577100v5
uniprot id: Q6UKY5
names: Function
names: Similarity
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.

3055:CHLRE 05g234637v5
gene id: 3055:CHLRE_05g234637v5
uniprot id: A8JE07
names: Similarity
messages: Belongs to the universal ribosomal protein uS8 family.

3055:CHLRE 03g144667v5
gene id: 3055:CHLRE_03g144667v5
uniprot id: A8J353
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory protein regulating the assembly of the plastid Clp protease system.
messages: Belongs to the ClpA/ClpB family.
messages: chloroplast

3055:CHLRE 01g015350v5
gene id: 3055:CHLRE_01g015350v5
uniprot id: A8HPJ2
uniprot id: Q39617
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
messages: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).
messages: chloroplast

3055:CHLRE 04g214150v5
gene id: 3055:CHLRE_04g214150v5
uniprot id: A0A2K3DTU9
uniprot id: A8J9T5
names: Cofactor
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the THI4 family.
messages: Binds 1 Fe cation per subunit.
messages: During the catalytic reaction, a sulfide is transferred from Cys-233 to a reaction intermediate, generating a dehydroalanine residue.
messages: Homooctamer.
messages: Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron-dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance.
messages: This protein may be expected to contain an N-terminal transit peptide but none has been predicted.
messages: chloroplast

3055:CHLRE 12g502750v5
gene id: 3055:CHLRE_12g502750v5
uniprot id: A8IJG5
names: Similarity
messages: Belongs to the prefoldin subunit beta family.

3055:CHLRE 09g386400v5
gene id: 3055:CHLRE_09g386400v5
uniprot id: A8J1C1
names: Similarity
messages: Belongs to the ubiquitin-activating E1 family.

3055:CHLRE 07g342352v5
gene id: 3055:CHLRE_07g342352v5
uniprot id: A8ITN4
names: Similarity
messages: Belongs to the archaeal Rpo12/eukaryotic RPC10 RNA polymerase subunit family.

3055:CHLRE 09g396213v5
gene id: 3055:CHLRE_09g396213v5
uniprot id: A8J0E4
names: Similarity
messages: Belongs to the PsbO family.

3055:CHLRE 17g739300v5
gene id: 3055:CHLRE_17g739300v5
uniprot id: A8IR06
names: Similarity
messages: Belongs to the UPF0047 family.

3055:CHLRE 06g281600v5
gene id: 3055:CHLRE_06g281600v5
uniprot id: A8J225
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.

3055:CHLRE 09g408000v5
gene id: 3055:CHLRE_09g408000v5
uniprot id: A8J7U3
names: Similarity
messages: Belongs to the GILT family.

3055:CHLRE 12g506450v5
gene id: 3055:CHLRE_12g506450v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g484200v5
gene id: 3055:CHLRE_12g484200v5
uniprot id: A8JHU6
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

3055:CHLRE 02g103500v5
gene id: 3055:CHLRE_02g103500v5
uniprot id: A8I4H7
names: Similarity
messages: Belongs to the sterol desaturase family.

3055:CHLRE 12g528450v5
gene id: 3055:CHLRE_12g528450v5
uniprot id: A8J5A6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily.
messages: Catalyzes the oxidation of L-aspartate to iminoaspartate.
messages: chloroplast

3055:CHLRE 06g299650v5
gene id: 3055:CHLRE_06g299650v5
uniprot id: A8INX1
names: Similarity
messages: Belongs to the peptidase S14 family.

3055:CHLRE 06g256300v5
gene id: 3055:CHLRE_06g256300v5
uniprot id: A8HY41
names: Similarity
messages: Belongs to the PP2C family.

3055:CHLRE 17g713350v5
gene id: 3055:CHLRE_17g713350v5
uniprot id: A8JDE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. DIT1 subfamily.
messages: Membrane
messages: chloroplast inner membrane

3055:CHLRE 14g629750v5
gene id: 3055:CHLRE_14g629750v5
uniprot id: A8IUW1
names: Cofactor
names: Similarity
messages: Belongs to the malic enzymes family.
messages: Divalent metal cations. Prefers magnesium or manganese.

3055:CHLRE 09g414050v5
gene id: 3055:CHLRE_09g414050v5
uniprot id: A8J4W8
names: Similarity
messages: Belongs to the RuvB family.

3055:CHLRE 02g083950v5
gene id: 3055:CHLRE_02g083950v5
uniprot id: A8I8A3
names: Similarity
messages: Belongs to the chloroplast-specific ribosomal protein cS23 family.

3055:CHLRE 13g583600v5
gene id: 3055:CHLRE_13g583600v5
uniprot id: A8HU66
names: Similarity
messages: Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.

3055:CHLRE 12g502800v5
gene id: 3055:CHLRE_12g502800v5
uniprot id: A8IJG8
names: Subcellular Location Annotation
messages: nucleolus

3055:CHLRE 06g257500v5
gene id: 3055:CHLRE_06g257500v5
uniprot id: Q7X7A7
names: Similarity
messages: Belongs to the 14-3-3 family.

3055:CHLRE 01g027800v5
gene id: 3055:CHLRE_01g027800v5
uniprot id: A8HQ97
names: Function
names: Similarity
names: Subunit
messages: Belongs to the V-ATPase H subunit family.
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments.
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.

3055:CHLRE 01g024350v5
gene id: 3055:CHLRE_01g024350v5
uniprot id: A8HQ21
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Membrane

3055:CHLRE 02g084050v5
gene id: 3055:CHLRE_02g084050v5
uniprot id: A8I8A8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SEC62 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 03g207250v5
gene id: 3055:CHLRE_03g207250v5
uniprot id: A8IX59
names: Similarity
messages: Belongs to the glutamine synthetase family.

3055:CHLRE 06g268250v5
gene id: 3055:CHLRE_06g268250v5
uniprot id: A8HWE3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 10g456200v5
gene id: 3055:CHLRE_10g456200v5
uniprot id: A8I0I1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS24 family.

3055:CHLRE 14g620500v5
gene id: 3055:CHLRE_14g620500v5
uniprot id: A8HP34
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 03g193850v5
gene id: 3055:CHLRE_03g193850v5
uniprot id: A8IWJ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the succinate/malate CoA ligase alpha subunit family.
messages: Heterodimer of an alpha and a beta subunit.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: Mitochondrion
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.

3055:CHLRE 13g570100v5
gene id: 3055:CHLRE_13g570100v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 17g720250v5
gene id: 3055:CHLRE_17g720250v5
uniprot id: A8J6D1
uniprot id: Q93WD2
names: Cofactor
names: Domain
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: Repressed by high light intensity due to a transient decrease in mRNA stability. Also down-regulated at lower light intensities by low temperature or limited carbon dioxide supply.
messages: Reversible phosphorylation plays a role in the State transition process and determines the affinity of LHCII for PSI and PSII.
messages: The LHC complex consists of chlorophyll a-b binding proteins.
messages: The N-terminus of the protein extends into the stroma where it is involved with adhesion of granal membranes and post-translational modifications; both are believed to mediate the distribution of excitation energy between photosystems I and II.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. CP29 facilitates the State 1 to State 2 transition, where State I is induced by excess photosystem I (PSI) light and State 2 is induced by excess photosystem II (PSII) light.
messages: chloroplast thylakoid membrane

3055:CHLRE 08g360250v5
gene id: 3055:CHLRE_08g360250v5
uniprot id: A8JGG7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

3055:CHLRE 12g531500v5
gene id: 3055:CHLRE_12g531500v5
uniprot id: A8IVX2
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DRC3 family.
messages: Component of the nexin-dynein regulatory complex (N-DRC) a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:23427265, PubMed:25411337). Required for normal flagellar waveform (PubMed:26063732).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of at least DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:25411337, PubMed:23427265). Found in a complex with DRC3, DRC4, DRC7 and DRC11 (PubMed:26063732).
messages: Defects in DRC3 give the dc3 phenotype characterized by reduced swimming speed, increased flagellar beat frequency and abnormal flagellar waveform.
messages: flagellum axoneme

3055:CHLRE 16g663800v5
gene id: 3055:CHLRE_16g663800v5
uniprot id: A8JFB4
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 16g670617v5
gene id: 3055:CHLRE_16g670617v5
uniprot id: A8JBE3
names: Similarity
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily.

3055:CHLRE 10g447300v5
gene id: 3055:CHLRE_10g447300v5
uniprot id: A8HZC5
names: Similarity
messages: Belongs to the DDI1 family.

3055:CHLRE 09g388200v5
gene id: 3055:CHLRE_09g388200v5
uniprot id: A8IZK3
names: Similarity
messages: Belongs to the universal ribosomal protein uL16 family.

3055:CHLRE 17g708550v5
gene id: 3055:CHLRE_17g708550v5
uniprot id: A8IR81
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 09g389100v5
gene id: 3055:CHLRE_09g389100v5
uniprot id: A8IZM3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GOT1 family.
messages: Golgi apparatus membrane
messages: Membrane

3055:CHLRE 12g508900v5
gene id: 3055:CHLRE_12g508900v5
uniprot id: A8IKD6
names: Activity Regulation
names: Similarity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.

3055:CHLRE 12g514000v5
gene id: 3055:CHLRE_12g514000v5
uniprot id: A8JHB3
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 08g360900v5
gene id: 3055:CHLRE_08g360900v5
uniprot id: A8J493
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.

3055:CHLRE 13g566050v5
gene id: 3055:CHLRE_13g566050v5
uniprot id: A8HRS8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP Sm proteins family.
messages: Nucleus

3055:CHLRE 02g085900v5
gene id: 3055:CHLRE_02g085900v5
uniprot id: A8I8K4
names: Similarity
messages: Belongs to the inositol monophosphatase superfamily.

3055:CHLRE 06g264600v5
gene id: 3055:CHLRE_06g264600v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 07g335200v5
gene id: 3055:CHLRE_07g335200v5
uniprot id: A8JCK3
names: Subcellular Location Annotation
messages: chloroplast

3055:CHLRE 12g546150v5
gene id: 3055:CHLRE_12g546150v5
uniprot id: A8IY88
uniprot id: Q42496
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetM family.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
messages: chloroplast thylakoid membrane

3055:CHLRE 03g176250v5
gene id: 3055:CHLRE_03g176250v5
uniprot id: A8IDY0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the V-ATPase V0D/AC39 subunit family.
messages: Subunit of the V0 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment.
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.

3055:CHLRE 10g430400v5
gene id: 3055:CHLRE_10g430400v5
uniprot id: A8IBG1
names: Function
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL37 family.
messages: Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.

3055:CHLRE 10g439100v5
gene id: 3055:CHLRE_10g439100v5
uniprot id: A8IIP9
names: Similarity
messages: Belongs to the TCP-1 chaperonin family.

3055:CHLRE 17g741200v5
gene id: 3055:CHLRE_17g741200v5
uniprot id: Q84TR5
names: Similarity
messages: Belongs to the MAPRE family.

3055:CHLRE 01g052300v5
gene id: 3055:CHLRE_01g052300v5
uniprot id: Q1ZZK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the E2F/DP family.
messages: Nucleus

3055:CHLRE 03g165100v5
gene id: 3055:CHLRE_03g165100v5
uniprot id: A8IFG7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaI family.
messages: May help in the organization of the PsaL subunit.
messages: Membrane
messages: chloroplast thylakoid membrane

3055:CHLRE 12g528750v5
gene id: 3055:CHLRE_12g528750v5
uniprot id: A8J597
names: Similarity
messages: Belongs to the universal ribosomal protein uL11 family.

3055:CHLRE 12g529100v5
gene id: 3055:CHLRE_12g529100v5
uniprot id: A8J588
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase proteolipid subunit family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.

3055:CHLRE 06g254150v5
gene id: 3055:CHLRE_06g254150v5
uniprot id: A8HYC0
names: Similarity
messages: Belongs to the WD repeat PWP2 family.

3055:CHLRE 10g452500v5
gene id: 3055:CHLRE_10g452500v5
uniprot id: A8I029
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ESF1 family.
messages: nucleolus

3055:CHLRE 02g111050v5
gene id: 3055:CHLRE_02g111050v5
uniprot id: Q6QBS6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Membrane

3055:CHLRE 10g442700v5
gene id: 3055:CHLRE_10g442700v5
uniprot id: A8II71
names: Similarity
messages: Belongs to the RuvB family.

3055:CHLRE 09g405850v5
gene id: 3055:CHLRE_09g405850v5
uniprot id: Q6V9A8
names: Similarity
messages: Belongs to the complex I 49 kDa subunit family.

3055:CHLRE 08g358556v5
gene id: 3055:CHLRE_08g358556v5
uniprot id: A8JIE5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the universal ribosomal protein uS14 family.
messages: chloroplast

3055:CHLRE 13g568800v5
gene id: 3055:CHLRE_13g568800v5
uniprot id: Q6UKY3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA5 subunit family.
messages: Mitochondrion inner membrane

3055:CHLRE 06g275050v5
gene id: 3055:CHLRE_06g275050v5
uniprot id: A8HVE0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase C26 family.
messages: extracellular space

3055:CHLRE 06g257650v5
gene id: 3055:CHLRE_06g257650v5
uniprot id: A8HXY3
names: Similarity
messages: Belongs to the MsrA Met sulfoxide reductase family.

3055:CHLRE 02g107550v5
gene id: 3055:CHLRE_02g107550v5
uniprot id: A8I3U7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CCC1 family.
messages: Membrane

3055:CHLRE 01g051450v5
gene id: 3055:CHLRE_01g051450v5
uniprot id: A8HNG7
names: Similarity
messages: Belongs to the SAP30 family.

3055:CHLRE 01g055550v5
gene id: 3055:CHLRE_01g055550v5
uniprot id: A8JCS0
names: Subcellular Location Annotation
messages: Mitochondrion inner membrane

3055:CHLRE 06g308250v5
gene id: 3055:CHLRE_06g308250v5
uniprot id: A8IMP6
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS4 family.

3055:CHLRE 14g621450v5
gene id: 3055:CHLRE_14g621450v5
uniprot id: A8HP55
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Component of the large ribosomal subunit (LSU).
messages: Cytoplasm

3055:CHLRE 07g332150v5
gene id: 3055:CHLRE_07g332150v5
uniprot id: A8IGW2
names: Subcellular Location Annotation
messages: Mitochondrion matrix

3055:CHLRE 03g154350v5
gene id: 3055:CHLRE_03g154350v5
uniprot id: Q9AU05
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 2 family.
messages: Membrane

3055:CHLRE 12g554700v5
gene id: 3055:CHLRE_12g554700v5
uniprot id: A8IYP2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the synaptobrevin family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 12g557000v5
gene id: 3055:CHLRE_12g557000v5
uniprot id: A8JGZ2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ATG12 family.
messages: Forms a conjugate with ATG5.
messages: Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.

3055:CHLRE 08g379650v5
gene id: 3055:CHLRE_08g379650v5
uniprot id: A8IZ79
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Tic20 family.
messages: Involved in protein precursor import into chloroplasts.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: chloroplast inner membrane
messages: chloroplast membrane

3055:CHLRE 12g511700v5
gene id: 3055:CHLRE_12g511700v5
uniprot id: A8IKV5
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

3055:CHLRE 12g550400v5
gene id: 3055:CHLRE_12g550400v5
uniprot id: A8IYH1
names: Similarity
messages: Belongs to the glutaredoxin family. CPYC subfamily.

3055:CHLRE 13g569850v5
gene id: 3055:CHLRE_13g569850v5
uniprot id: A8HSA2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: Membrane

3055:CHLRE 17g703900v5
gene id: 3055:CHLRE_17g703900v5
uniprot id: Q5DM57
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IFT172 family.
messages: Component of the IFT complex B, the core composed of IFT25, IFT27, IFT46, IFT52, IFT74, IFT81 and IFT88 as well as associated subunits IFT20, IFT57, IFT80 and IFT172. Interacts with microtubule end-binding protein 1 (MAPRE1/EB1).
messages: Required for the maintenance and formation of cilia and participates in the control of flagellar assembly/disassembly at the tip. Involved in regulating the transition between anterograde and retrograde intraflagellar transport at the tip.
messages: cilium basal body

3055:CHLRE 16g670800v5
gene id: 3055:CHLRE_16g670800v5
uniprot id: A8ISI4
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TBCA family.
messages: Supercomplex made of cofactors A to E. Cofactors A and D function by capturing and stabilizing tubulin in a quasi-native conformation. Cofactor E binds to the cofactor D-tubulin complex; interaction with cofactor C then causes the release of tubulin polypeptides that are committed to the native state.
messages: cytoskeleton

3055:CHLRE 12g514850v5
gene id: 3055:CHLRE_12g514850v5
uniprot id: Q66T67
names: Similarity
messages: Belongs to the heat shock protein 90 family.

3055:CHLRE 12g505700v5
gene id: 3055:CHLRE_12g505700v5
uniprot id: A8IJX8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TBP family.
messages: Nucleus

3055:CHLRE 16g664700v5
gene id: 3055:CHLRE_16g664700v5
uniprot id: A8JF96
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SURF1 family.
messages: Mitochondrion inner membrane
messages: Probably involved in the biogenesis of the COX complex.

3055:CHLRE 03g172500v5
gene id: 3055:CHLRE_03g172500v5
uniprot id: A8IEF7
names: Cofactor
names: Similarity
messages: Belongs to the alternative oxidase family.
messages: Binds 2 iron ions per subunit.

3055:CHLRE 03g185550v5
gene id: 3055:CHLRE_03g185550v5
uniprot id: A8IRK4
names: Similarity
messages: Belongs to the FBPase class 1 family.

3055:CHLRE 06g278222v5
gene id: 3055:CHLRE_06g278222v5
uniprot id: A8J8Y1
uniprot id: P25387
names: Developmental Stage
names: Similarity
messages: Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily.
messages: Constitutively expressed during the cell cycle and flagella regeneration.

3055:CHLRE 02g098450v5
gene id: 3055:CHLRE_02g098450v5
uniprot id: A8I232
names: Subcellular Location Annotation
messages: chloroplast

3055:CHLRE 12g552500v5
gene id: 3055:CHLRE_12g552500v5
uniprot id: A8IYK8
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 05g242500v5
gene id: 3055:CHLRE_05g242500v5
uniprot id: Q01656
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the flagellar radial spoke RSP4/6 family.
messages: Flagellar radial spokes contribute to the regulation of dynein arm activity and thus the pattern of flagellar bending. They consist of a thin stalk, which is attached to the a subfiber of the outer doublet microtubule, and a bulbous head, which is attached to the stalk and appears to interact with the projections from the central pair of microtubules.
messages: The radial spoke head is made of five different polypeptides (RSP1, RSP4, RSP6, RSP9, and RSP10).
messages: flagellum axoneme

3055:CHLRE 12g497750v5
gene id: 3055:CHLRE_12g497750v5
uniprot id: A8JGL2
names: Function
names: Similarity
messages: Belongs to the trehalose phosphatase family.
messages: Removes the phosphate from trehalose 6-phosphate to produce free trehalose.

3055:CHLRE 08g358522v5
gene id: 3055:CHLRE_08g358522v5
uniprot id: A8JID7
names: Similarity
messages: Belongs to the peptidase C1 family.

3055:CHLRE 06g279750v5
gene id: 3055:CHLRE_06g279750v5
uniprot id: A8J1Z0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).

3055:CHLRE 03g197550v5
gene id: 3055:CHLRE_03g197550v5
uniprot id: A8IWW0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NDC1 family.
messages: Membrane
messages: Nucleus membrane
messages: nuclear pore complex

3055:CHLRE 10g462950v5
gene id: 3055:CHLRE_10g462950v5
uniprot id: A8I1D3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL33 family.

3055:CHLRE 03g154550v5
gene id: 3055:CHLRE_03g154550v5
uniprot id: A8J7M2
names: Similarity
messages: Belongs to the pyrroline-5-carboxylate reductase family.

3055:CHLRE 06g266750v5
gene id: 3055:CHLRE_06g266750v5
uniprot id: A8HV98
uniprot id: P54347
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 17g713900v5
gene id: 3055:CHLRE_17g713900v5
uniprot id: A8JDD2
names: Similarity
messages: Belongs to the WD repeat LST8 family.

3055:CHLRE 07g326800v5
gene id: 3055:CHLRE_07g326800v5
uniprot id: A8IHM8
names: Similarity
messages: Belongs to the PPP phosphatase family. PP-5 (PP-T) subfamily.

3055:CHLRE 07g312750v5
gene id: 3055:CHLRE_07g312750v5
uniprot id: A8I5Y2
names: Subcellular Location Annotation
messages: Cytoplasm

3055:CHLRE 16g672753v5
gene id: 3055:CHLRE_16g672753v5
uniprot id: A8JBD7
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 01g015950v5
gene id: 3055:CHLRE_01g015950v5
uniprot id: A8HPK7
names: Similarity
messages: Belongs to the SUA5 family.

3055:CHLRE 12g515650v5
gene id: 3055:CHLRE_12g515650v5
uniprot id: A8JHW7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit K family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3055:CHLRE 06g267950v5
gene id: 3055:CHLRE_06g267950v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 16g651500v5
gene id: 3055:CHLRE_16g651500v5
uniprot id: A8J9F7
names: Similarity
messages: Belongs to the CSN7/EIF3M family. CSN7 subfamily.

3055:CHLRE 10g427600v5
gene id: 3055:CHLRE_10g427600v5
uniprot id: Q9SNV7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AAA ATPase family. Katanin p60 subunit A1 subfamily.
messages: Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
messages: cytoskeleton

3055:CHLRE 07g353450v5
gene id: 3055:CHLRE_07g353450v5
uniprot id: A8JFR9
names: Similarity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.

3055:CHLRE 10g453450v5
gene id: 3055:CHLRE_10g453450v5
uniprot id: A8I074
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP core protein family.
messages: Nucleus
messages: cytosol

3055:CHLRE 06g278550v5
gene id: 3055:CHLRE_06g278550v5
uniprot id: A8J1W5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CTL (choline transporter-like) family.
messages: Cell membrane
messages: Choline transporter.
messages: Membrane

3055:CHLRE 03g156900v5
gene id: 3055:CHLRE_03g156900v5
uniprot id: Q9ZSJ4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 16g659250v5
gene id: 3055:CHLRE_16g659250v5
uniprot id: A8J8L1
names: Similarity
messages: Belongs to the cytochrome b5 family.

3055:CHLRE 15g635850v5
gene id: 3055:CHLRE_15g635850v5
uniprot id: A8JDV9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase gamma chain family.
messages: Membrane

3055:CHLRE 03g206705v5
gene id: 3055:CHLRE_03g206705v5
uniprot id: A8JBT6
names: Similarity
messages: Belongs to the glycosyltransferase GT106 family.

3055:CHLRE 05g241950v5
gene id: 3055:CHLRE_05g241950v5
uniprot id: A8I528
names: Similarity
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.

3055:CHLRE 07g356400v5
gene id: 3055:CHLRE_07g356400v5
uniprot id: A8JFW5
names: Similarity
messages: Belongs to the PDE6D/unc-119 family.

3055:CHLRE 07g339050v5
gene id: 3055:CHLRE_07g339050v5
uniprot id: A8ITH3
names: Similarity
messages: Belongs to the actin-binding proteins ADF family.

3055:CHLRE 10g423250v5
gene id: 3055:CHLRE_10g423250v5
uniprot id: A8ICG9
names: Similarity
names: Subunit
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Homodimer.

3055:CHLRE 01g001750v5
gene id: 3055:CHLRE_01g001750v5
uniprot id: A8JD56
names: Similarity
messages: Belongs to the FKBP-type PPIase family. Tig subfamily.

3055:CHLRE 16g655750v5
gene id: 3055:CHLRE_16g655750v5
uniprot id: A0A2K3CT60
uniprot id: A8J8F6
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Asymmetrically dimethylated at Arg-462 during flagellum resorption. Probably methylated by PRMT1.
messages: Belongs to the tektin family.
messages: Structural component of ciliary and flagellar microtubules. Plays a key role in the assembly or attachment of the inner dynein arm to microtubules in flagella and cilia. Forms filamentous polymers in the walls of ciliary and flagellar microtubules.
messages: defects in axonemal inner-arm dynein.
messages: flagellum axoneme
messages: flagellum basal body

3055:CHLRE 12g526800v5
gene id: 3055:CHLRE_12g526800v5
uniprot id: A8J5F7
names: Similarity
names: Subunit
messages: Belongs to the 6-phosphogluconate dehydrogenase family.
messages: Homodimer.

3055:CHLRE 06g257000v5
gene id: 3055:CHLRE_06g257000v5
uniprot id: Q6QJE0
names: Subcellular Location Annotation
messages: Periplasm

3055:CHLRE 12g504700v5
gene id: 3055:CHLRE_12g504700v5
uniprot id: A8IJS4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g284200v5
gene id: 3055:CHLRE_06g284200v5
uniprot id: Q8S3T9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 10g423950v5
gene id: 3055:CHLRE_10g423950v5
uniprot id: A8ICD3
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 17g703700v5
gene id: 3055:CHLRE_17g703700v5
uniprot id: A8IQ05
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the succinate/malate CoA ligase beta subunit family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Heterodimer of an alpha and a beta subunit.
messages: Heterooctamer of 4 alpha and 4 beta chains.
messages: Mitochondrion
messages: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.

3055:CHLRE 08g365900v5
gene id: 3055:CHLRE_08g365900v5
uniprot id: P93664
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Required for non-photochemical quenching (NPQ), a mechanism that converts and dissipates the harmful excess absorbed light energy into heat and protect the photosynthetic apparatus from photo-oxidative damage (PubMed:27335457, PubMed:29555769, PubMed:30782831). Is able to sense luminal acidification of the thylakoid membranes, which occurs along with elevated electron flow caused by excess light, and to induce a large, fast, and reversible pH-dependent quenching in LHCII-containing membranes (PubMed:27335457). Mediates excitation energy transfer from light-harvesting complex II (LHCII) to photosystem I (PSI), rather than photosystem II (PSII), at low pH, which mimics the acidified lumen of the thylakoid membranes in high light-exposed chloroplasts (PubMed:29555769, PubMed:30782831). Activates PSI-dependent fluorescence quenching in addition to dissipating excitation energy in LHCII to avoid photooxidative stress under excess light (PubMed:29555769, PubMed:30782831).
messages: Transiently induced by transition from dark to light (at protein level) (PubMed:8980495, PubMed:10794530). Induced by high light stress (at protein level) (PubMed:19940928, PubMed:24850838).
messages: chloroplast thylakoid membrane

3055:CHLRE 10g459250v5
gene id: 3055:CHLRE_10g459250v5
uniprot id: A8I0Y2
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL33 family.

3055:CHLRE 12g546000v5
gene id: 3055:CHLRE_12g546000v5
uniprot id: A8IY84
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrion-specific ribosomal protein mL54 family.
messages: Mitochondrion

3055:CHLRE 09g396300v5
gene id: 3055:CHLRE_09g396300v5
uniprot id: Q9ZTA7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protoporphyrinogen/coproporphyrinogen oxidase family. Protoporphyrinogen oxidase subfamily.
messages: Binds 1 FAD per subunit.
messages: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
messages: chloroplast

3055:CHLRE 12g486250v5
gene id: 3055:CHLRE_12g486250v5
uniprot id: A8IL29
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Arf family.
messages: GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.
messages: Golgi apparatus

3055:CHLRE 03g175500v5
gene id: 3055:CHLRE_03g175500v5
uniprot id: A8IE17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TspO/BZRP family.
messages: Membrane

3055:CHLRE 04g217932v5
gene id: 3055:CHLRE_04g217932v5
uniprot id: A8JEP1
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

3055:CHLRE 01g010000v5
gene id: 3055:CHLRE_01g010000v5
uniprot id: Q9FXT7
names: Activity Regulation
names: Similarity
messages: Activated by threonine and tyrosine phosphorylation.
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.

3055:CHLRE 10g432800v5
gene id: 3055:CHLRE_10g432800v5
uniprot id: A0A2K3D9Z4
uniprot id: A8IB25
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the universal ribosomal protein uS2 family.
messages: Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21.
messages: Cytoplasm
messages: Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.

3055:CHLRE 03g145247v5
gene id: 3055:CHLRE_03g145247v5
uniprot id: A8J328
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 03g191050v5
gene id: 3055:CHLRE_03g191050v5
uniprot id: A8IRX5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Ran family.
messages: GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle.
messages: Nucleus

3055:CHLRE 12g510250v5
gene id: 3055:CHLRE_12g510250v5
uniprot id: A8IKM0
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 03g203450v5
gene id: 3055:CHLRE_03g203450v5
uniprot id: A8IXG3
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS21 family.

3055:CHLRE 06g299300v5
gene id: 3055:CHLRE_06g299300v5
uniprot id: A8INY3
uniprot id: Q39582
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the tubulin family.
messages: Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
messages: Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles, suggesting that it is involved in the minus-end nucleation of microtubule assembly.
messages: microtubule organizing center

3055:CHLRE 06g251400v5
gene id: 3055:CHLRE_06g251400v5
uniprot id: A8HYN3
names: Cofactor
names: Similarity
messages: Belongs to the malic enzymes family.
messages: Divalent metal cations. Prefers magnesium or manganese.

3055:CHLRE 06g265800v5
gene id: 3055:CHLRE_06g265800v5
uniprot id: A8HWS8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

3055:CHLRE 16g688302v5
gene id: 3055:CHLRE_16g688302v5
uniprot id: A8JAH7
names: Function
names: Similarity
messages: Belongs to the bifunctional nuclease family.
messages: Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen.

3055:CHLRE 09g391097v5
gene id: 3055:CHLRE_09g391097v5
uniprot id: A8J1A3
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL24 family.

3055:CHLRE 03g145607v5
gene id: 3055:CHLRE_03g145607v5
uniprot id: A8J304
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAPP small subunits family. BET3 subfamily.
messages: Homodimer.
messages: May play a role in vesicular transport from endoplasmic reticulum to Golgi.
messages: cis-Golgi network

3055:CHLRE 12g506350v5
gene id: 3055:CHLRE_12g506350v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 03g158000v5
gene id: 3055:CHLRE_03g158000v5
uniprot id: A8J7H3
uniprot id: Q39566
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
messages: Homodimer.
messages: chloroplast

3055:CHLRE 01g022150v5
gene id: 3055:CHLRE_01g022150v5
uniprot id: A8HPX4
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 09g393400v5
gene id: 3055:CHLRE_09g393400v5
uniprot id: Q5CB51
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.

3055:CHLRE 17g704850v5
gene id: 3055:CHLRE_17g704850v5
uniprot id: A8IPS8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the purine/pyrimidine phosphoribosyltransferase family.
messages: Cytoplasm

3055:CHLRE 10g420700v5
gene id: 3055:CHLRE_10g420700v5
uniprot id: A8ICT4
names: Similarity
messages: Belongs to the eukaryotic ATPase epsilon family.

3055:CHLRE 12g487250v5
gene id: 3055:CHLRE_12g487250v5
uniprot id: A8IL75
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plant tobamovirus multiplication TOM1 protein family.
messages: Membrane

3055:CHLRE 07g323000v5
gene id: 3055:CHLRE_07g323000v5
uniprot id: Q1ZZK3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the E2F/DP family.
messages: Nucleus

3055:CHLRE 17g701700v5
gene id: 3055:CHLRE_17g701700v5
uniprot id: A8IQB8
names: Cofactor
names: Similarity
messages: Belongs to the fatty acid desaturase type 2 family.
messages: Binds 2 iron ions per subunit.

3055:CHLRE 12g504500v5
gene id: 3055:CHLRE_12g504500v5
uniprot id: Q42680
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 02g113100v5
gene id: 3055:CHLRE_02g113100v5
uniprot id: A8I311
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.
messages: Mediates the uptake of pyruvate into mitochondria.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 02g097334v5
gene id: 3055:CHLRE_02g097334v5
uniprot id: A8I2A0
names: Similarity
messages: Belongs to the DDA1 family.

3055:CHLRE 07g342150v5
gene id: 3055:CHLRE_07g342150v5
uniprot id: Q9FPR7
names: Similarity
messages: Belongs to the glutamyl-tRNA reductase family.

3055:CHLRE 04g211800v5
gene id: 3055:CHLRE_04g211800v5
uniprot id: A8J9W0
names: Similarity
messages: Belongs to the universal ribosomal protein uL14 family.

3055:CHLRE 10g441500v5
gene id: 3055:CHLRE_10g441500v5
uniprot id: A8IIC5
names: Similarity
messages: Belongs to the peptidase C65 family.

3055:CHLRE 02g142350v5
gene id: 3055:CHLRE_02g142350v5
uniprot id: A8J0Q5
names: Function
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family. UFC1 subfamily.
messages: E1-like enzyme which specifically catalyzes the second step in ufmylation. Ufmylation is involved in reticulophagy (also called ER-phagy) induced in response to endoplasmic reticulum stress.

3055:CHLRE 12g504800v5
gene id: 3055:CHLRE_12g504800v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 12g503300v5
gene id: 3055:CHLRE_12g503300v5
uniprot id: A8IJJ8
names: Similarity
messages: In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.

3055:CHLRE 09g400750v5
gene id: 3055:CHLRE_09g400750v5
uniprot id: A8J1H0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: Membrane

3055:CHLRE 06g261200v5
gene id: 3055:CHLRE_06g261200v5
uniprot id: A8HXF2
names: Similarity
messages: Belongs to the sterol desaturase family.

3055:CHLRE 12g543050v5
gene id: 3055:CHLRE_12g543050v5
uniprot id: A8IY12
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 08g367400v5
gene id: 3055:CHLRE_08g367400v5
uniprot id: P0DO18
uniprot id: P0DO19
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Impaired in non-photochemical quenching (NPQ) under high light conditions.
messages: Induced by sulfur deprivation (PubMed:15470261). Induced by high light stress (at protein level) (PubMed:19940928, PubMed:21267060, PubMed:24850838, PubMed:27358399, PubMed:27693674).
messages: Interacts with the photosystem II-light-harvesting complex II (PSII-LHCII) supercomplex to form PSII-LHCII-LHCSR3 supercomplex.
messages: Required for non-photochemical quenching (NPQ), a mechanism that converts and dissipates the harmful excess absorbed light energy into heat and protect the photosynthetic apparatus from photo-oxidative damage (PubMed:19940928, PubMed:21267060, PubMed:23716695, PubMed:26817847, PubMed:27626383, PubMed:27693674, PubMed:28233792, PubMed:31042040, PubMed:30782831). NPQ includes dissipating excess light energy to heat (qE) and the reversible coupling of LHCII to photosystems (state transitions or qT), which are considered separate NPQ mechanisms (PubMed:28233792). Is responsible for most of the excess light energy to heat dissipation (qE), also known as energy-dependent chlorophyll fluorescence quenching activity of chlorophyll excited states (PubMed:21267060, PubMed:28233792). Involved in a de-coupling and re-coupling of energy transfer to photosystem II (PSII) during qT (PubMed:28233792). Binds chlorophyll a and b (PubMed:21267060, PubMed:27150505). Is able to sense luminal acidification of the thylakoid membranes, which occurs along with elevated electron flow caused by excess light (PubMed:21267060, PubMed:26817847, PubMed:31042040). Establishes interactions with photosystem II (PSII) antenna components upon lumen acidification, and protonation of lumen-exposed, negatively charged residues both in LHCSR3 and in PSII antenna components (PubMed:26817847). Mediates excitation energy transfer from light-harvesting complex II (LHCII) to photosystem I (PSI), rather than photosystem II (PSII), at low pH, which mimics the acidified lumen of the thylakoid membranes in high light-exposed chloroplasts (PubMed:30782831). Activates PSI-dependent fluorescence quenching in addition to dissipating excitation energy in LHCII to avoid photooxidative stress under excess light (PubMed:30782831). Contributes with PGRL1 to the regulation of electron flow upstream of photosystem I (PSI), and limits the accumulation of electrons on the PSI acceptor side, thus avoiding PSI photoinhibition (P…
messages: chloroplast thylakoid membrane

3055:CHLRE 06g292800v5
gene id: 3055:CHLRE_06g292800v5
uniprot id: A8JFM7
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 10g442600v5
gene id: 3055:CHLRE_10g442600v5
uniprot id: A8II76
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Membrane

3055:CHLRE 02g142000v5
gene id: 3055:CHLRE_02g142000v5
uniprot id: A8J0P9
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 11g467707v5
gene id: 3055:CHLRE_11g467707v5
uniprot id: A8J9X1
names: Similarity
messages: Belongs to the ATPase epsilon chain family.

3055:CHLRE 10g444150v5
gene id: 3055:CHLRE_10g444150v5
uniprot id: A8IHZ7
names: Similarity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. IRG family.

3055:CHLRE 06g252700v5
gene id: 3055:CHLRE_06g252700v5
uniprot id: A8HYG6
names: Similarity
messages: Belongs to the SF3A2 family.

3055:CHLRE 06g263500v5
gene id: 3055:CHLRE_06g263500v5
uniprot id: A8HX36
names: Similarity
messages: Belongs to the archease family.

3055:CHLRE 16g649900v5
gene id: 3055:CHLRE_16g649900v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 02g083600v5
gene id: 3055:CHLRE_02g083600v5
uniprot id: A8I882
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.
messages: Cytoplasm
messages: Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
messages: Monomer.

3055:CHLRE 04g214050v5
gene id: 3055:CHLRE_04g214050v5
uniprot id: A6YCJ2
names: Activity Regulation
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: 60% inhibition by 20 uM tungstate or by lack of glucose in the medium, but no inhibition by sulfate.
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: Decreased nitrate reductase activity due to a reduced molybdate uptake. No effect in strain 704 due to the presence of a second molybdate transporter.
messages: High affinity molybdate transporter. Acts through an energy-dependent process.
messages: Membrane
messages: Up-regulated by nitrate, but not by molybdate.

3055:CHLRE 05g241300v5
gene id: 3055:CHLRE_05g241300v5
uniprot id: A8J834
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP Sm proteins family. SmF/LSm6 subfamily.
messages: Nucleus

3055:CHLRE 01g049500v5
gene id: 3055:CHLRE_01g049500v5
uniprot id: Q9AU02
names: Similarity
messages: Belongs to the cytochrome c oxidase subunit 2 family.

3055:CHLRE 12g528850v5
gene id: 3055:CHLRE_12g528850v5
uniprot id: Q39592
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Consists of at least 3 heavy chains (alpha, beta and gamma), 2 intermediate chains and 8 light chains.
messages: May be involved in regulating the redox state of functionally important thiol groups within dynein.
messages: flagellum
messages: flagellum axoneme

3055:CHLRE 12g561200v5
gene id: 3055:CHLRE_12g561200v5
uniprot id: A8JHN4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes small subunit family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.

3055:CHLRE 12g507300v5
gene id: 3055:CHLRE_12g507300v5
uniprot id: A8IK52
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein eS8 family. Ribosome biogenesis protein NSA2 subfamily.
messages: Component of the pre-66S ribosomal particle.
messages: Involved in the biogenesis of the 60S ribosomal subunit. May play a part in the quality control of pre-60S particles.
messages: nucleolus

3055:CHLRE 16g661050v5
gene id: 3055:CHLRE_16g661050v5
uniprot id: A8J8P4
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL34 family.

3055:CHLRE 02g095089v5
gene id: 3055:CHLRE_02g095089v5
uniprot id: A8JEL2
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the HAM1 NTPase family.
messages: Binds 1 divalent metal cation per subunit; can use either Mg(2+) or Mn(2+).
messages: Cytoplasm
messages: Homodimer.
messages: Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions.

3055:CHLRE 10g440450v5
gene id: 3055:CHLRE_10g440450v5
uniprot id: A8III5
names: Similarity
messages: Belongs to the Psb28 family.

3055:CHLRE 07g357750v5
gene id: 3055:CHLRE_07g357750v5
uniprot id: A8JI92
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TDE1 family.
messages: Membrane

3055:CHLRE 17g731700v5
gene id: 3055:CHLRE_17g731700v5
uniprot id: A8JFE8
names: Similarity
messages: Belongs to the FMO family.

3055:CHLRE 01g013700v5
gene id: 3055:CHLRE_01g013700v5
uniprot id: A8HPF4
names: Similarity
messages: Belongs to the eukaryotic mitochondrial porin (TC 1.B.8.1) family.

3055:CHLRE 01g032650v5
gene id: 3055:CHLRE_01g032650v5
uniprot id: A8HQP0
names: Function
names: Similarity
messages: Belongs to the transaldolase family. Type 1 subfamily.
messages: Catalyzes the rate-limiting step of the non-oxidative phase in the pentose phosphate pathway. Catalyzes the reversible conversion of sedheptulose-7-phosphate and D-glyceraldehyde 3-phosphate into erythrose-4-phosphate and beta-D-fructose 6-phosphate.

3055:CHLRE 17g734500v5
gene id: 3055:CHLRE_17g734500v5
uniprot id: A8IW47
names: Similarity
messages: Belongs to the V-ATPase E subunit family.

3055:CHLRE 07g330950v5
gene id: 3055:CHLRE_07g330950v5
uniprot id: A8IH35
names: Similarity
messages: Belongs to the adaptor complexes small subunit family.

3055:CHLRE 06g267550v5
gene id: 3055:CHLRE_06g267550v5
uniprot id: A8HWI3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BBS5 family.
messages: Membrane
messages: centriolar satellite
messages: cilium membrane

3055:CHLRE 01g047750v5
gene id: 3055:CHLRE_01g047750v5
uniprot id: A8HN50
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL20 family.

3055:CHLRE 02g109600v5
gene id: 3055:CHLRE_02g109600v5
uniprot id: A8I3J5
names: Similarity
messages: Belongs to the inositol monophosphatase superfamily.

3055:CHLRE 16g680300v5
gene id: 3055:CHLRE_16g680300v5
uniprot id: A8J3V5
names: Similarity
messages: Belongs to the 'GDSL' lipolytic enzyme family.

3055:CHLRE 01g055200v5
gene id: 3055:CHLRE_01g055200v5
uniprot id: A8JCQ2
names: Similarity
messages: Belongs to the SS18 family.

3055:CHLRE 10g461050v5
gene id: 3055:CHLRE_10g461050v5
uniprot id: A8I164
names: Function
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family.
messages: Catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

3055:CHLRE 06g257150v5
gene id: 3055:CHLRE_06g257150v5
uniprot id: A8HY08
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL43 family.

3055:CHLRE 03g206800v5
gene id: 3055:CHLRE_03g206800v5
uniprot id: A8IX73
names: Similarity
messages: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

3055:CHLRE 09g394436v5
gene id: 3055:CHLRE_09g394436v5
uniprot id: A8J0B0
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 13g587050v5
gene id: 3055:CHLRE_13g587050v5
uniprot id: Q8VZZ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic release factor 1 family.
messages: Cytoplasm

3055:CHLRE 06g278800v5
gene id: 3055:CHLRE_06g278800v5
uniprot id: A8J1X1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3055:CHLRE 06g252550v5
gene id: 3055:CHLRE_06g252550v5
uniprot id: A8HYH4
names: Similarity
messages: Belongs to the 2-oxoacid dehydrogenase family.

3055:CHLRE 13g573351v5
gene id: 3055:CHLRE_13g573351v5
uniprot id: A8HSU7
names: Similarity
messages: Belongs to the universal ribosomal protein uS9 family.

3055:CHLRE 03g199759v5
gene id: 3055:CHLRE_03g199759v5
uniprot id: A8JBN8
names: Similarity
messages: Belongs to the OSBP family.

3055:CHLRE 16g665600v5
gene id: 3055:CHLRE_16g665600v5
uniprot id: A8JF80
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 14g627900v5
gene id: 3055:CHLRE_14g627900v5
uniprot id: A8IV17
names: Similarity
messages: Belongs to the SF3B5 family.

3055:CHLRE 12g514300v5
gene id: 3055:CHLRE_12g514300v5
uniprot id: A8JHB8
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 12g505500v5
gene id: 3055:CHLRE_12g505500v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 03g197000v5
gene id: 3055:CHLRE_03g197000v5
uniprot id: A8IWU0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RPF2 family.
messages: nucleolus

3055:CHLRE 02g078300v5
gene id: 3055:CHLRE_02g078300v5
uniprot id: P83564
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glutathione peroxidase family.
messages: By selenium, particularly under autotrophic conditions.
messages: May constitute a glutathione peroxidase-like protective system against oxidative stresses. Hydrogen peroxide, tert-butyl hydroperoxide and cumene, but not phosphatidylcholine hydroperoxide, can act as acceptors.
messages: Mitochondrion

3055:CHLRE 03g199900v5
gene id: 3055:CHLRE_03g199900v5
uniprot id: A8IXR5
names: Similarity
messages: Belongs to the eukaryotic initiation factor 4E family.

3055:CHLRE 12g489700v5
gene id: 3055:CHLRE_12g489700v5
uniprot id: A8ILJ9
names: Similarity
messages: Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.

3055:CHLRE 17g728800v5
gene id: 3055:CHLRE_17g728800v5
uniprot id: A8J6V1
names: Similarity
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.

3055:CHLRE 17g700950v5
gene id: 3055:CHLRE_17g700950v5
uniprot id: Q2HZ22
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: chloroplast

3055:CHLRE 12g498650v5
gene id: 3055:CHLRE_12g498650v5
uniprot id: A8JGJ4
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. Aurora subfamily.

3055:CHLRE 02g084300v5
gene id: 3055:CHLRE_02g084300v5
uniprot id: A8I8C3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.
messages: Involved in the biosynthesis of phylloquinone (vitamin K1). Methyltransferase required for the conversion of 2-phytyl-1,4-beta-naphthoquinol to phylloquinol.
messages: chloroplast

3055:CHLRE 06g272950v5
gene id: 3055:CHLRE_06g272950v5
uniprot id: A8HVP2
names: Similarity
messages: Belongs to the universal ribosomal protein uS13 family.

3055:CHLRE 10g417700v5
gene id: 3055:CHLRE_10g417700v5
uniprot id: A8ID84
names: Similarity
messages: Belongs to the universal ribosomal protein uL3 family.

3055:CHLRE 12g510650v5
gene id: 3055:CHLRE_12g510650v5
uniprot id: A8IKQ0
names: Similarity
messages: Belongs to the FBPase class 1 family.

3055:CHLRE 01g047850v5
gene id: 3055:CHLRE_01g047850v5
uniprot id: A8HN54
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

3055:CHLRE 08g382350v5
gene id: 3055:CHLRE_08g382350v5
uniprot id: A2PZC5
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g260400v5
gene id: 3055:CHLRE_06g260400v5
uniprot id: A8HXJ7
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 10g422600v5
gene id: 3055:CHLRE_10g422600v5
uniprot id: A8ICJ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I 51 kDa subunit family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor. Essential for the catalytic activity and assembly of complex I.
messages: Mitochondrion inner membrane

3055:CHLRE 01g020400v5
gene id: 3055:CHLRE_01g020400v5
uniprot id: A8HPU4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat SMU1 family.
messages: Nucleus speckle

3055:CHLRE 13g565650v5
gene id: 3055:CHLRE_13g565650v5
uniprot id: A8HRQ4
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

3055:CHLRE 12g508150v5
gene id: 3055:CHLRE_12g508150v5
uniprot id: Q4JLR9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SNF2/RAD54 helicase family. ISWI subfamily.
messages: Nucleus

3055:CHLRE 12g516200v5
gene id: 3055:CHLRE_12g516200v5
uniprot id: A8JHX9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: chloroplast

3055:CHLRE 10g420800v5
gene id: 3055:CHLRE_10g420800v5
uniprot id: A8ICS9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As part of the central apparatus of the cilium axoneme plays a role in cilium movement and thereby cell motility.
messages: Belongs to the CFAP46 family.
messages: Part of the PDCP1 complex composed of CFAP46, CFAP54, CFAP74 and CFAP221; the PDCP1 complex binds calmodulin.
messages: cilium axoneme

3055:CHLRE 07g345400v5
gene id: 3055:CHLRE_07g345400v5
uniprot id: A8ITV9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Axoneme-binding protein that acts as a regulatory componement of the outer dynein arm and regulates ciliary motility.
messages: Belongs to the CFAP70 family.
messages: Impaired motility with outer dynein arm defects.
messages: cilium
messages: cilium axoneme

3055:CHLRE 02g085257v5
gene id: 3055:CHLRE_02g085257v5
uniprot id: Q8RUT8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the archaeal/bacterial/fungal opsin family.
messages: Membrane

3055:CHLRE 03g192050v5
gene id: 3055:CHLRE_03g192050v5
uniprot id: Q8LL16
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family.
messages: Membrane

3055:CHLRE 12g499400v5
gene id: 3055:CHLRE_12g499400v5
uniprot id: A8JGI0
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 12g523200v5
gene id: 3055:CHLRE_12g523200v5
uniprot id: A8J5R1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
messages: Nucleus

3055:CHLRE 06g264950v5
gene id: 3055:CHLRE_06g264950v5
uniprot id: A8HWF6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 01g030850v5
gene id: 3055:CHLRE_01g030850v5
uniprot id: A8HQI6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Cytoplasm
messages: Nucleus
messages: The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.

3055:CHLRE 16g675749v5
gene id: 3055:CHLRE_16g675749v5
uniprot id: A8J3A7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Nucleus

3055:CHLRE 17g698000v5
gene id: 3055:CHLRE_17g698000v5
uniprot id: A8IQU3
uniprot id: P38482
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
messages: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.
messages: Mitochondrion
messages: Mitochondrion inner membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

3055:CHLRE 01g051900v5
gene id: 3055:CHLRE_01g051900v5
uniprot id: Q8HEB4
names: Cofactor
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Rieske iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Membrane
messages: Mitochondrion inner membrane
messages: The Rieske protein is a high potential 2Fe-2S protein.

3055:CHLRE 12g496750v5
gene id: 3055:CHLRE_12g496750v5
uniprot id: Q6V9B1
names: Similarity
messages: Belongs to the complex I 23 kDa subunit family.

3055:CHLRE 07g334700v5
gene id: 3055:CHLRE_07g334700v5
uniprot id: A8JCL2
names: Similarity
messages: Belongs to the ATG101 family.

3055:CHLRE 17g724350v5
gene id: 3055:CHLRE_17g724350v5
uniprot id: A8J6K9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Cytoplasm
messages: Nucleus
messages: The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.

3055:CHLRE 11g467547v5
gene id: 3055:CHLRE_11g467547v5
uniprot id: A8JF35
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.

3055:CHLRE 06g284150v5
gene id: 3055:CHLRE_06g284150v5
uniprot id: Q8RUE9
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 01g016600v5
gene id: 3055:CHLRE_01g016600v5
uniprot id: A8HPM2
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ELIP/psbS family.
messages: Induced transiently by high light stress (at protein level).
messages: Required for non-photochemical quenching (NPQ), a mechanism that converts and dissipates the harmful excess absorbed light energy into heat and protect the photosynthetic apparatus from photo-oxidative damage (PubMed:27358399). Seems involved in the activation of NPQ, possibly by promoting conformational changes required for activation of LHCSR3-dependent quenching in the antenna of photosystem II (PSII) (PubMed:27358399, PubMed:27329221).
messages: chloroplast thylakoid membrane

3055:CHLRE 12g558700v5
gene id: 3055:CHLRE_12g558700v5
uniprot id: A8JGW5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NDK family.
messages: cilium axoneme

3055:CHLRE 08g372550v5
gene id: 3055:CHLRE_08g372550v5
uniprot id: A8JEV2
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 06g252000v5
gene id: 3055:CHLRE_06g252000v5
uniprot id: A8HYK1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LZTFL1 family.
messages: Cytoplasm
messages: Regulates ciliary localization of the BBSome complex. Together with the BBSome complex, controls SMO ciliary trafficking and contributes to the sonic hedgehog (SHH) pathway regulation. May play a role in neurite outgrowth. May have tumor suppressor function.
messages: Self-associates. Interacts with BBS9; the interaction mediates the association of LZTL1 with the BBsome complex and regulates BBSome ciliary trafficking.

3055:CHLRE 12g535900v5
gene id: 3055:CHLRE_12g535900v5
uniprot id: A8IVK0
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3055:CHLRE 17g701200v5
gene id: 3055:CHLRE_17g701200v5
uniprot id: A8IQE3
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL14 family.

3055:CHLRE 16g659950v5
gene id: 3055:CHLRE_16g659950v5
uniprot id: A8J8M5
names: Similarity
messages: Belongs to the universal ribosomal protein uS5 family.

3055:CHLRE 02g144700v5
gene id: 3055:CHLRE_02g144700v5
uniprot id: A8J0U2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
messages: Membrane
messages: Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport.

3055:CHLRE 12g489750v5
gene id: 3055:CHLRE_12g489750v5
uniprot id: A8ILK1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP52 family.
messages: Cytoplasm
messages: May play a role in cell growth and/or survival.
messages: flagellum

3055:CHLRE 13g606050v5
gene id: 3055:CHLRE_13g606050v5
uniprot id: A8JAY5
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.

3055:CHLRE 11g468450v5
gene id: 3055:CHLRE_11g468450v5
uniprot id: P05434
names: Function
names: Miscellaneous
names: Similarity
messages: Belongs to the centrin family.
messages: Binds four moles of calcium per mole of protein.
messages: This calcium-binding protein is found in the basal body complexes (the functional homolog of the centrosome in animal cell). In mitotic cells it is specifically associated with the poles of the mitotic spindles at the sites of the duplicated basal body complexes.

3055:CHLRE 13g579800v5
gene id: 3055:CHLRE_13g579800v5
uniprot id: A8HTR6
names: Similarity
messages: Belongs to the isopentenyl phosphate kinase family.

3055:CHLRE 06g251650v5
gene id: 3055:CHLRE_06g251650v5
uniprot id: A8HYL9
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 03g150950v5
gene id: 3055:CHLRE_03g150950v5
uniprot id: A8J2N5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glycosyltransferase 2 family.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex.
messages: Endoplasmic reticulum
messages: Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.

3055:CHLRE 01g038950v5
gene id: 3055:CHLRE_01g038950v5
uniprot id: A8HMD5
names: Similarity
messages: Belongs to the selenoprotein M/F family.

3055:CHLRE 10g424100v5
gene id: 3055:CHLRE_10g424100v5
uniprot id: A8ICC8
uniprot id: Q93Y52
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPase family.
messages: Monomer.
messages: The N-terminus is blocked.
messages: chloroplast

3055:CHLRE 09g389208v5
gene id: 3055:CHLRE_09g389208v5
uniprot id: A8J163
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3055:CHLRE 12g560200v5
gene id: 3055:CHLRE_12g560200v5
uniprot id: A8JHQ6
names: Similarity
names: Subunit
messages: Belongs to the acetyltransferase family. GNA1 subfamily.
messages: Homodimer.

3055:CHLRE 17g728150v5
gene id: 3055:CHLRE_17g728150v5
uniprot id: A8J6T1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the synaptobrevin family.
messages: Cell membrane
messages: Membrane

3055:CHLRE 08g367650v5
gene id: 3055:CHLRE_08g367650v5
uniprot id: Q8W1K8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat WDR5/wds family.
messages: Loss of monomethylated, an increase of dimethylated and a decrease of trimethylated 'Lys-4' histone H3, and defects in epigenetic silencing.
messages: Nucleus
messages: Part of a complex involved in 'Lys-4' histone H3 methylation.

3055:CHLRE 06g250100v5
gene id: 3055:CHLRE_06g250100v5
uniprot id: A8HYV3
names: Similarity
messages: Belongs to the heat shock protein 70 family.

3055:CHLRE 03g160800v5
gene id: 3055:CHLRE_03g160800v5
uniprot id: A8J7C5
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 01g053500v5
gene id: 3055:CHLRE_01g053500v5
uniprot id: A8HNP3
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the protein prenyltransferase subunit beta family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C-terminal sequence -XXCC, -XCXC and -CCXX.

3055:CHLRE 06g262700v5
gene id: 3055:CHLRE_06g262700v5
uniprot id: A8HX89
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UQCRB/QCR7 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation.
messages: Mitochondrion inner membrane

3055:CHLRE 13g572350v5
gene id: 3055:CHLRE_13g572350v5
uniprot id: A8HSM7
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

3055:CHLRE 11g467738v5
gene id: 3055:CHLRE_11g467738v5
uniprot id: A8JBY1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3055:CHLRE 07g330650v5
gene id: 3055:CHLRE_07g330650v5
uniprot id: A8IH52
names: Similarity
messages: Belongs to the mTERF family.

3055:CHLRE 12g504200v5
gene id: 3055:CHLRE_12g504200v5
uniprot id: A8IJQ4
names: Similarity
messages: Belongs to the universal ribosomal protein uS12 family.

3055:CHLRE 17g718350v5
gene id: 3055:CHLRE_17g718350v5
uniprot id: A8JII1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SRP receptor beta subunit family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 12g506300v5
gene id: 3055:CHLRE_12g506300v5
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 08g377550v5
gene id: 3055:CHLRE_08g377550v5
uniprot id: A8IZB3
names: Similarity
messages: Belongs to the yippee family.

3055:CHLRE 06g274250v5
gene id: 3055:CHLRE_06g274250v5
uniprot id: P54347
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 02g141200v5
gene id: 3055:CHLRE_02g141200v5
uniprot id: A8J0N3
names: Function
names: Similarity
names: Subunit
messages: Belongs to the NadC/ModD family.
messages: Hexamer formed by 3 homodimers.
messages: Involved in the catabolism of quinolinic acid (QA).

3055:CHLRE 07g314950v5
gene id: 3055:CHLRE_07g314950v5
uniprot id: A8I678
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
messages: Nucleus

3055:CHLRE 07g332786v5
gene id: 3055:CHLRE_07g332786v5
uniprot id: A8IGR6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase A22B family.
messages: Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane.
messages: Membrane

3055:CHLRE 12g544114v5
gene id: 3055:CHLRE_12g544114v5
uniprot id: A8IY43
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 02g113200v5
gene id: 3055:CHLRE_02g113200v5
uniprot id: Q42688
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the glutamine synthetase family.
messages: Cytoplasm
messages: Homooctamer.
messages: Irreversibly inhibited by the herbicide L-phosphinothricin (PPT).

3055:CHLRE 02g114700v5
gene id: 3055:CHLRE_02g114700v5
uniprot id: A8I2U9
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 12g511150v5
gene id: 3055:CHLRE_12g511150v5
uniprot id: A8IKS4
names: Similarity
messages: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.

3055:CHLRE 17g741000v5
gene id: 3055:CHLRE_17g741000v5
uniprot id: A8JE83
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAP-alpha family.
messages: Endoplasmic reticulum membrane
messages: Heterotetramer of TRAP-alpha, TRAP-beta, TRAP-delta and TRAP-gamma.
messages: Membrane
messages: Shows a remarkable charge distribution with the N-terminus being highly negatively charged, and the cytoplasmic C-terminus positively charged.
messages: TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. May be involved in the recycling of the translocation apparatus after completion of the translocation process or may function as a membrane-bound chaperone facilitating folding of translocated proteins.

3055:CHLRE 10g428900v5
gene id: 3055:CHLRE_10g428900v5
uniprot id: A8IBQ0
names: Similarity
messages: Belongs to the TlyA family.

3055:CHLRE 12g499900v5
gene id: 3055:CHLRE_12g499900v5
uniprot id: A8IJ00
names: Similarity
messages: Belongs to the VPS29 family.

3055:CHLRE 02g111000v5
gene id: 3055:CHLRE_02g111000v5
uniprot id: A8I3B1
names: Similarity
messages: Belongs to the glycosyltransferase 77 family.

3055:CHLRE 08g370450v5
gene id: 3055:CHLRE_08g370450v5
uniprot id: A8JES1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GrpE family.
messages: Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.
messages: Mitochondrion matrix

3055:CHLRE 06g275850v5
gene id: 3055:CHLRE_06g275850v5
uniprot id: Q42680
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g560950v5
gene id: 3055:CHLRE_12g560950v5
uniprot id: P14224
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaG/PsaK family.
messages: Not yet known.
messages: chloroplast thylakoid membrane

3055:CHLRE 12g502600v5
gene id: 3055:CHLRE_12g502600v5
uniprot id: A0A2K3D361
uniprot id: A8IJF8
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the divalent anion:Na+ symporter (DASS) superfamily. Na+/sulfate symporter (TC 2.A.47.4) family.
messages: Cell membrane
messages: Membrane
messages: Na(+)/sulfate cotransporter with a probable high-affinity for sulfate and a proteasome dependent turnover.
messages: No effect on sulfate uptake, due to the redundancy with SLT2 and SULTR2. Slt1 and slt2, as well as slt1 and sultr2 double mutants show a 50% decline in uptake while the slt1, slt2 and sultr2 triple mutant exhibits no increase in sulfate uptake capacity when deprived of sulfur.
messages: Up-regulated by sulfur deprivation.

3055:CHLRE 16g683250v5
gene id: 3055:CHLRE_16g683250v5
uniprot id: A8IS54
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TVP23 family.
messages: Golgi apparatus membrane
messages: Golgi membrane protein involved in vesicular trafficking.
messages: Membrane

3055:CHLRE 07g351650v5
gene id: 3055:CHLRE_07g351650v5
uniprot id: A8IU92
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP20 family.
messages: Cilium- and flagellum-specific protein that plays a role in axonemal structure organization and motility (PubMed:24259666, PubMed:24574454). Involved in the control of flagellar beating in an asymmetric and planar waveform (PubMed:24259666, PubMed:24574454). Stabilizes outer doublet microtubules (DMTs) of the axoneme and may work as a scaffold for intratubular proteins, such as tektin and PACRG, to produce the beak structures in DMT1, 5 and 6 (PubMed:24259666, PubMed:24574454). Not essential for flagellar assembly (PubMed:24574454).
messages: Exhibit erratic movements with cells continuously turning around the body axis. Display longer and sharp kinks flagella. Flagella beat in a uncoordinated and deformed non-planar manner. Lost beak-like strucure projections in B-tubules of the outer doublet microtubules (DMTs) 1, 5 and 6.
messages: Up-regulated during flagellar assembly.
messages: flagellum axoneme
messages: flagellum basal body

3055:CHLRE 06g299050v5
gene id: 3055:CHLRE_06g299050v5
uniprot id: A8INZ7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the diacylglycerol acyltransferase family.
messages: Endoplasmic reticulum membrane

3055:CHLRE 06g265050v5
gene id: 3055:CHLRE_06g265050v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 14g619133v5
gene id: 3055:CHLRE_14g619133v5
uniprot id: A8HP06
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
messages: Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
messages: Mitochondrion inner membrane

3055:CHLRE 09g386912v5
gene id: 3055:CHLRE_09g386912v5
uniprot id: A8J110
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the diacylglycerol acyltransferase family.
messages: Endoplasmic reticulum membrane

3055:CHLRE 01g047800v5
gene id: 3055:CHLRE_01g047800v5
uniprot id: A8HN52
names: Similarity
messages: Belongs to the glutaredoxin family. CGFS subfamily.

3055:CHLRE 12g558450v5
gene id: 3055:CHLRE_12g558450v5
uniprot id: A8JGX0
names: Similarity
messages: Belongs to the spermidine/spermine synthase family.

3055:CHLRE 17g697500v5
gene id: 3055:CHLRE_17g697500v5
uniprot id: A8IQV3
names: Similarity
messages: Belongs to the TPPP family.

3055:CHLRE 17g737250v5
gene id: 3055:CHLRE_17g737250v5
uniprot id: A8JCA8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
messages: chloroplast

3055:CHLRE 17g706800v5
gene id: 3055:CHLRE_17g706800v5
uniprot id: A8IRB7
names: Similarity
messages: Belongs to the isochorismatase family.

3055:CHLRE 06g278251v5
gene id: 3055:CHLRE_06g278251v5
uniprot id: A8J8W0
names: Similarity
messages: Belongs to the DNA photolyase class-1 family.

3055:CHLRE 04g223300v5
gene id: 3055:CHLRE_04g223300v5
uniprot id: A8IT08
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 12g550600v5
gene id: 3055:CHLRE_12g550600v5
uniprot id: A8IYH3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3055:CHLRE 12g529400v5
gene id: 3055:CHLRE_12g529400v5
uniprot id: A8J576
names: Cofactor
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS27 family.
messages: Binds 1 zinc ion per subunit.

3055:CHLRE 12g551900v5
gene id: 3055:CHLRE_12g551900v5
uniprot id: A8IYJ5
names: Similarity
messages: Belongs to the FAM136 family.

3055:CHLRE 05g247851v5
gene id: 3055:CHLRE_05g247851v5
uniprot id: A8I5R9
names: Similarity
messages: Belongs to the peptidase C1 family.

3055:CHLRE 08g367150v5
gene id: 3055:CHLRE_08g367150v5
uniprot id: A8J425
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 01g001400v5
gene id: 3055:CHLRE_01g001400v5
uniprot id: A8JD49
names: Similarity
messages: Belongs to the peptidase M8 family.

3055:CHLRE 12g510800v5
gene id: 3055:CHLRE_12g510800v5
uniprot id: A8IKQ6
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mg-chelatase subunits D/I family.
messages: Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
messages: Redox regulation; active in reducing conditions, inactive in oxidizing conditions.
messages: The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD, AND CHLH.
messages: chloroplast

3055:CHLRE 10g441250v5
gene id: 3055:CHLRE_10g441250v5
uniprot id: A8IID5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM231 family.
messages: Membrane
messages: Transmembrane component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling.
messages: cilium membrane

3055:CHLRE 02g076350v5
gene id: 3055:CHLRE_02g076350v5
uniprot id: A8IA45
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ATPase alpha/beta chains family.
messages: Non-catalytic subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments.
messages: Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.

3055:CHLRE 06g305500v5
gene id: 3055:CHLRE_06g305500v5
uniprot id: A8IN41
names: Similarity
messages: Belongs to the isochorismatase family.

3055:CHLRE 07g325723v5
gene id: 3055:CHLRE_07g325723v5
uniprot id: A8JH21
names: Similarity
messages: Belongs to the adenylate kinase family.

3055:CHLRE 06g278238v5
gene id: 3055:CHLRE_06g278238v5
uniprot id: A8J8W7
names: Similarity
messages: Belongs to the SERF family.

3055:CHLRE 06g267600v5
gene id: 3055:CHLRE_06g267600v5
uniprot id: A8HWI0
names: Similarity
messages: Belongs to the lycopene cyclase family.

3055:CHLRE 04g214502v5
gene id: 3055:CHLRE_04g214502v5
uniprot id: A8J9S9
names: Similarity
messages: Belongs to the NAD(P)-dependent epimerase/dehydratase family.

3055:CHLRE 06g309050v5
gene id: 3055:CHLRE_06g309050v5
uniprot id: A8IMK5
names: Similarity
messages: Belongs to the CNOT2/3/5 family.

3055:CHLRE 01g050400v5
gene id: 3055:CHLRE_01g050400v5
uniprot id: A8HNC8
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 03g186900v5
gene id: 3055:CHLRE_03g186900v5
uniprot id: A8IRN8
names: Similarity
messages: Belongs to the APC13 family.

3055:CHLRE 12g522350v5
gene id: 3055:CHLRE_12g522350v5
uniprot id: A8J5U1
names: Similarity
messages: Belongs to the class-I aminoacyl-tRNA synthetase family.

3055:CHLRE 01g002300v5
gene id: 3055:CHLRE_01g002300v5
uniprot id: A8JD64
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 03g160500v5
gene id: 3055:CHLRE_03g160500v5
uniprot id: A8J7C8
names: Similarity
messages: Belongs to the class-II aminoacyl-tRNA synthetase family.

3055:CHLRE 16g665364v5
gene id: 3055:CHLRE_16g665364v5
uniprot id: Q6V8K6
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 03g184600v5
gene id: 3055:CHLRE_03g184600v5
uniprot id: A8IRH1
names: Function
messages: Putative transcription factor.

3055:CHLRE 02g097650v5
gene id: 3055:CHLRE_02g097650v5
uniprot id: A8I274
names: Similarity
messages: Belongs to the proteasome subunit S9 family.

3055:CHLRE 12g520650v5
gene id: 3055:CHLRE_12g520650v5
uniprot id: A8J5Y5
names: Similarity
messages: Belongs to the TUB family.

3055:CHLRE 13g570000v5
gene id: 3055:CHLRE_13g570000v5
uniprot id: A8HSB0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g309350v5
gene id: 3055:CHLRE_06g309350v5
uniprot id: A8IMI9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERD2 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 12g550702v5
gene id: 3055:CHLRE_12g550702v5
uniprot id: A8JHG4
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g278159v5
gene id: 3055:CHLRE_06g278159v5
uniprot id: A8J936
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CONSTANS family.
messages: Nucleus

3055:CHLRE 12g522950v5
gene id: 3055:CHLRE_12g522950v5
uniprot id: Q8H6H9
names: Similarity
messages: Belongs to the ParA family. MinD subfamily.

3055:CHLRE 12g554800v5
gene id: 3055:CHLRE_12g554800v5
uniprot id: A8IYP4
uniprot id: P19824
names: Activity Regulation
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the phosphoribulokinase family.
messages: Component of a complex that contains two dimers of PRK, two tetramers of GAPDH and CP12.
messages: Light regulated via thioredoxin by reversible oxidation/reduction of sulfhydryl/disulfide groups.
messages: chloroplast

3055:CHLRE 01g051800v5
gene id: 3055:CHLRE_01g051800v5
uniprot id: A8HNI5
names: Similarity
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.

3055:CHLRE 17g701650v5
gene id: 3055:CHLRE_17g701650v5
uniprot id: A8IQC1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL27 family.

3055:CHLRE 12g513200v5
gene id: 3055:CHLRE_12g513200v5
uniprot id: A8JH98
names: Similarity
messages: Belongs to the enolase family.

3055:CHLRE 06g278215v5
gene id: 3055:CHLRE_06g278215v5
uniprot id: A8J8Y6
names: Function
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.
messages: Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism.

3055:CHLRE 11g474800v5
gene id: 3055:CHLRE_11g474800v5
uniprot id: A8JFR4
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

3055:CHLRE 17g722200v5
gene id: 3055:CHLRE_17g722200v5
uniprot id: A8J6G9
names: Similarity
messages: Belongs to the universal ribosomal protein uL11 family.

3055:CHLRE 11g468300v5
gene id: 3055:CHLRE_11g468300v5
uniprot id: A8JC30
names: Function
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.
messages: Belongs to the small GTPase superfamily. SAR1 family.
messages: Involved in transport from the endoplasmic reticulum to the Golgi apparatus.

3055:CHLRE 17g724550v5
gene id: 3055:CHLRE_17g724550v5
uniprot id: Q9XF62
names: Developmental Stage
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SSNA1 family.
messages: During cell division, levels are elevated between hours 0 at the onset of division and 4 at mid-divison. After 5 hours, when division is close to completion, levels decrease and stay low until hour 7.
messages: Microtubule-binding protein which stabilizes dynamic microtubules by slowing growth and shrinkage at both plus and minus ends and serves as a sensor of microtubule damage (By similarity). Induces microtubule branching which is mediated by the formation of long SSNA1 fibrils which guide microtubule protofilaments to split apart from the mother microtubule and form daughter microtubules (PubMed:30250060). Required for cell division (PubMed:12640030).
messages: RNAi-mediated knockdown results in multinucleate, multiflagellate cells.
messages: Self-assembles into fibrils in a head-to-tail fashion.
messages: flagellum axoneme
messages: flagellum basal body

3055:CHLRE 03g182050v5
gene id: 3055:CHLRE_03g182050v5
uniprot id: A8JH58
names: Function
names: Similarity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.
messages: Catalyzes the conversion of long-chain fatty acids to their active form acyl-CoAs for both synthesis of cellular lipids, and degradation via beta-oxidation.

3055:CHLRE 07g322950v5
gene id: 3055:CHLRE_07g322950v5
uniprot id: A8I7C5
names: Similarity
messages: Belongs to the NAD kinase family.

3055:CHLRE 06g299600v5
gene id: 3055:CHLRE_06g299600v5
uniprot id: A8INX4
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 17g701250v5
gene id: 3055:CHLRE_17g701250v5
uniprot id: A8IQE0
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CCDC39 family.
messages: Interacts with CCDC40/FAP172.
messages: Phosphorylated in flagella.
messages: Required for assembly of dynein regulatory complex (DRC) and inner dynein arm complexes, which are responsible for ciliary beat regulation, by acting as a molecular ruler that determines the 96 nanometer (nm) repeat length and arrangements of components in cilia and flagella (PubMed:25395538). Together with CCDC40/FAP172 forms a 96-nm-long complex in flagella. This complex does not act as a physical ruler, but rather act as a negative regulator for radial spokes: the complex lays along specific protofilaments, masking radial spoke binding sites and allowing recruitment of inner dynein arm (IDA) and nexin-dynein regulatory complexes (N-DRC) (PubMed:25395538).
messages: Short and immotile flagella. Inner dynein arm (IDA) and nexin-dynein regulatory complex (N-DRC) components are absent or severely reduced. Radial spokes are attached to doublet microtubules with an irregular periodicity of 32 nm instead of 96 nm.
messages: flagellum

3055:CHLRE 03g206600v5
gene id: 3055:CHLRE_03g206600v5
uniprot id: A8IX80
names: Similarity
messages: Belongs to the IlvD/Edd family.

3055:CHLRE 16g679500v5
gene id: 3055:CHLRE_16g679500v5
uniprot id: Q6V9A9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA2 subunit family.
messages: Mitochondrion inner membrane

3055:CHLRE 13g588850v5
gene id: 3055:CHLRE_13g588850v5
uniprot id: A8HV07
names: Similarity
messages: Belongs to the glycosyltransferase GT106 family.

3055:CHLRE 01g052100v5
gene id: 3055:CHLRE_01g052100v5
uniprot id: A8HNJ8
names: Similarity
messages: Belongs to the universal ribosomal protein uL18 family.

3055:CHLRE 07g325650v5
gene id: 3055:CHLRE_07g325650v5
uniprot id: A8I7Q7
names: Similarity
messages: Belongs to the CDIP1/LITAF family.

3055:CHLRE 03g187450v5
gene id: 3055:CHLRE_03g187450v5
uniprot id: A8IRQ1
names: Similarity
messages: Belongs to the ribose 5-phosphate isomerase family.

3055:CHLRE 10g431800v5
gene id: 3055:CHLRE_10g431800v5
uniprot id: A8IB85
names: PTM
names: Similarity
messages: Belongs to the sulfatase family.
messages: The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.

3055:CHLRE 08g372100v5
gene id: 3055:CHLRE_08g372100v5
uniprot id: A8JEU4
names: Similarity
messages: Belongs to the heat shock protein 70 family.

3055:CHLRE 16g650250v5
gene id: 3055:CHLRE_16g650250v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 07g327400v5
gene id: 3055:CHLRE_07g327400v5
uniprot id: A8IHL3
names: Similarity
messages: Belongs to the complex I 30 kDa subunit family.

3055:CHLRE 10g466700v5
gene id: 3055:CHLRE_10g466700v5
uniprot id: A8I1T0
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3055:CHLRE 03g185050v5
gene id: 3055:CHLRE_03g185050v5
uniprot id: A0A2K3DY02
uniprot id: A8IRJ7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP53 family.
messages: May play a role in filopodium movement.
messages: flagellum

3055:CHLRE 07g328150v5
gene id: 3055:CHLRE_07g328150v5
uniprot id: A8IHI1
names: Similarity
messages: Belongs to the protein disulfide isomerase family.

3055:CHLRE 01g005050v5
gene id: 3055:CHLRE_01g005050v5
uniprot id: A8JFZ2
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g265500v5
gene id: 3055:CHLRE_06g265500v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 12g530900v5
gene id: 3055:CHLRE_12g530900v5
uniprot id: A8IVZ2
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 13g590750v5
gene id: 3055:CHLRE_13g590750v5
uniprot id: A8IW75
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g266150v5
gene id: 3055:CHLRE_06g266150v5
uniprot id: A8HWQ9
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 07g341600v5
gene id: 3055:CHLRE_07g341600v5
uniprot id: Q945T1
uniprot id: Q945T2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GrpE family.
messages: Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.
messages: Mitochondrion matrix

3055:CHLRE 02g141846v5
gene id: 3055:CHLRE_02g141846v5
uniprot id: A8JDI7
names: Similarity
messages: Belongs to the RecA family. DMC1 subfamily.

3055:CHLRE 06g265350v5
gene id: 3055:CHLRE_06g265350v5
uniprot id: A8HWF6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 17g720350v5
gene id: 3055:CHLRE_17g720350v5
uniprot id: A8J6D4
names: Similarity
messages: Belongs to the MinE family.

3055:CHLRE 12g501200v5
gene id: 3055:CHLRE_12g501200v5
uniprot id: A8IJ79
names: Function
names: Similarity
names: Subunit
messages: Belongs to the SKP1 family.
messages: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1.
messages: Part of a SCF (SKP1-cullin-F-box) protein ligase complex.

3055:CHLRE 08g359750v5
gene id: 3055:CHLRE_08g359750v5
uniprot id: A8JGF8
names: Similarity
messages: Belongs to the universal ribosomal protein uS4 family.

3055:CHLRE 14g615100v5
gene id: 3055:CHLRE_14g615100v5
uniprot id: A8JAR0
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.

3055:CHLRE 09g388467v5
gene id: 3055:CHLRE_09g388467v5
uniprot id: A8J146
names: Similarity
messages: Belongs to the Rab GDI family.

3055:CHLRE 07g335300v5
gene id: 3055:CHLRE_07g335300v5
uniprot id: A8JCK1
names: Similarity
messages: Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.

3055:CHLRE 05g237700v5
gene id: 3055:CHLRE_05g237700v5
uniprot id: A8J8A6
names: Similarity
messages: Belongs to the NOP10 family.

3055:CHLRE 17g730950v5
gene id: 3055:CHLRE_17g730950v5
uniprot id: A8JFG3
uniprot id: P46869
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
names: Tissue Specificity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. Kinesin II subfamily.
messages: Flagellar axoneme.
messages: Interacts with D1BLIC, DHC1B and DAW1.
messages: Probably involved in flagellar assembly and maintenance. May play a role in flagellar synthesis.
messages: cytoskeleton

3055:CHLRE 09g400367v5
gene id: 3055:CHLRE_09g400367v5
uniprot id: A8J7U7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RNA 3'-terminal cyclase family. Type 2 subfamily.
messages: nucleolus

3055:CHLRE 12g494750v5
gene id: 3055:CHLRE_12g494750v5
uniprot id: A8JDN4
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS20 family.

3055:CHLRE 13g591150v5
gene id: 3055:CHLRE_13g591150v5
uniprot id: A8HWF6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 03g174400v5
gene id: 3055:CHLRE_03g174400v5
uniprot id: A8IE68
names: Cofactor
names: Similarity
messages: Belongs to the cysteine dioxygenase family.
messages: Binds 1 Fe cation per subunit.

3055:CHLRE 12g494850v5
gene id: 3055:CHLRE_12g494850v5
uniprot id: A8JDN2
names: Similarity
messages: Belongs to the adenylate kinase family.

3055:CHLRE 09g387800v5
gene id: 3055:CHLRE_09g387800v5
uniprot id: Q8LRU1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ferritin family.
messages: Oligomer of 24 subunits. There are two types of subunits: L (light) chain and H (heavy) chain. The major chain can be light or heavy, depending on the species and tissue type. The functional molecule forms a roughly spherical shell with a diameter of 12 nm and contains a central cavity into which the insoluble mineral iron core is deposited.
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
messages: Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

3055:CHLRE 06g284900v5
gene id: 3055:CHLRE_06g284900v5
uniprot id: A8J282
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 05g246552v5
gene id: 3055:CHLRE_05g246552v5
uniprot id: A8I5M3
names: Similarity
messages: Belongs to the arylamine N-acetyltransferase family.

3055:CHLRE 12g540400v5
gene id: 3055:CHLRE_12g540400v5
uniprot id: A8IYU6
names: Similarity
messages: Belongs to the CNOT9 family.

3055:CHLRE 04g223100v5
gene id: 3055:CHLRE_04g223100v5
uniprot id: A8IT01
uniprot id: P20507
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the alpha-carbonic anhydrase family.
messages: Periplasm
messages: Requires light in addition to a decrease in CO(2) concentration during growth.
messages: Reversible hydration of carbon dioxide.
messages: Tetramer of two large and two small subunits linked by two disulfide bonds.

3055:CHLRE 03g204250v5
gene id: 3055:CHLRE_03g204250v5
uniprot id: A8IXE0
names: Cofactor
names: Similarity
messages: Belongs to the adenosylhomocysteinase family.
messages: Binds 1 NAD(+) per subunit.

3055:CHLRE 01g038400v5
gene id: 3055:CHLRE_01g038400v5
uniprot id: A8HMC0
uniprot id: Q9STD3
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the calreticulin family.
messages: Can be divided into a N-terminal globular domain, a proline-rich P-domain forming an elongated arm-like structure and a C-terminal acidic domain. The P-domain binds one molecule of calcium with high affinity, whereas the acidic C-domain binds multiple calcium ions with low affinity (By similarity).
messages: Endoplasmic reticulum lumen
messages: Molecular calcium-binding chaperone promoting folding, oligomeric assembly and quality control in the ER via the calreticulin/calnexin cycle. This lectin may interact transiently with almost all of the monoglucosylated glycoproteins that are synthesized in the ER (By similarity).
messages: The interaction with glycans occurs through a binding site in the globular lectin domain.
messages: The zinc binding sites are localized to the N-domain.

3055:CHLRE 03g207050v5
gene id: 3055:CHLRE_03g207050v5
uniprot id: A8IX67
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL29 family.

3055:CHLRE 13g569200v5
gene id: 3055:CHLRE_13g569200v5
uniprot id: A8HS79
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GTP-binding SRP family. SRP54 subfamily.
messages: Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein).
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). Binds to the signal sequence of presecretory proteins when they emerge from the ribosomes.
messages: Cytoplasm
messages: Has a two domain structure: the G-domain binds GTP; the M-domain binds the 7S RNA in presence of SRP19 and also binds the signal sequence.
messages: Signal recognition particle consists of a 7S RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.

3055:CHLRE 17g723350v5
gene id: 3055:CHLRE_17g723350v5
uniprot id: A0A2K3CQF7
uniprot id: A8J6J0
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
messages: Cell membrane
messages: H(+)/sulfate cotransporter with a probable high-affinity for sulfate and a proteasome independent turnover.
messages: Membrane
messages: No effect on sulfate uptake, due to the redundancy with SLT1 and SLTR2. Slt1 and sultr2 double mutants, as well as slt2 and sultr2 show a 50% decline in uptake while the slt1, slt2 and sultr2 triple mutant exhibits no increase in sulfate uptake capacity when deprived of sulfur.
messages: Up-regulated by sulfur deprivation.

3055:CHLRE 16g665750v5
gene id: 3055:CHLRE_16g665750v5
uniprot id: Q9SMH4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the pseudouridine synthase TruB family.
messages: Possibly associated with other factors required for trans-splicing.
messages: Required for trans-splicing of exons 2 and 3 of the chloroplast encoded psaA mRNA (a group II intron). It is not known if this protein has pseudouridine activity; mutation of the potential active site residue does not cause loss of trans-splicing.
messages: chloroplast

3055:CHLRE 06g251600v5
gene id: 3055:CHLRE_06g251600v5
uniprot id: D5LAU2
names: Similarity
messages: Belongs to the eIF-2-beta/eIF-5 family.

3055:CHLRE 07g357200v5
gene id: 3055:CHLRE_07g357200v5
uniprot id: A2PZC3
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

3055:CHLRE 03g210513v5
gene id: 3055:CHLRE_03g210513v5
uniprot id: A8JBW0
names: Similarity
messages: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family.

3055:CHLRE 10g446550v5
gene id: 3055:CHLRE_10g446550v5
uniprot id: A8HZ87
names: Function
names: Similarity
names: Subunit
messages: Belongs to the V-ATPase F subunit family.
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments.
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.

3055:CHLRE 02g095092v5
gene id: 3055:CHLRE_02g095092v5
uniprot id: Q6J214
names: Similarity
messages: Belongs to the phytoene/squalene synthase family.

3055:CHLRE 12g518550v5
gene id: 3055:CHLRE_12g518550v5
uniprot id: A8J666
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CFAP54 family.
messages: Gene prediction.
messages: Part of the PDCP1 complex composed of CFAP46, CFAP54, CFAP74 and CFAP221; the PDCP1 complex binds calmodulin.
messages: cilium axoneme

3055:CHLRE 05g234648v5
gene id: 3055:CHLRE_05g234648v5
uniprot id: A8JDZ8
names: Similarity
messages: Belongs to the PHF5 family.

3055:CHLRE 02g102400v5
gene id: 3055:CHLRE_02g102400v5
uniprot id: A8I4N7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
messages: Component of the RNA polymerase III (Pol III) complex consisting of 17 subunits.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: nucleolus

3055:CHLRE 17g711700v5
gene id: 3055:CHLRE_17g711700v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g555850v5
gene id: 3055:CHLRE_12g555850v5
uniprot id: A8IYR6
names: Similarity
messages: Belongs to the DeSI family.

3055:CHLRE 06g282500v5
gene id: 3055:CHLRE_06g282500v5
uniprot id: A8J239
names: Similarity
messages: Belongs to the universal ribosomal protein uL23 family.

3055:CHLRE 01g032350v5
gene id: 3055:CHLRE_01g032350v5
uniprot id: A8HQM9
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 16g683793v5
gene id: 3055:CHLRE_16g683793v5
uniprot id: A8JBB2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pescadillo family.
messages: Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
messages: nucleolus
messages: nucleoplasm

3055:CHLRE 02g142086v5
gene id: 3055:CHLRE_02g142086v5
uniprot id: A8JDK0
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 07g335400v5
gene id: 3055:CHLRE_07g335400v5
uniprot id: A8JCJ9
names: Similarity
messages: Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.

3055:CHLRE 17g724400v5
gene id: 3055:CHLRE_17g724400v5
uniprot id: A8J6L0
names: Similarity
messages: Belongs to the FAM154 family.

3055:CHLRE 01g010900v5
gene id: 3055:CHLRE_01g010900v5
uniprot id: A8HP84
uniprot id: P50362
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Algae contain three forms of GAPDH: two cytosolic forms which participate in glycolysis and one chloroplastic form which participates in photosynthesis. These three forms are encoded by distinct genes.
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
messages: GAPDHB, the second subunit found in plants, is absent in algae.
messages: Homotetramer. Component of a complex that contains two dimers of PRK, two tetramers of GAPDH and CP12. CP12 associates with GAPDH, causing its conformation to change. This GAPDH/CP12 complex binds PRK to form a half-complex (one unit). This unit probably dimerizes due partially to interactions between the enzymes of each unit.
messages: chloroplast

3055:CHLRE 14g626700v5
gene id: 3055:CHLRE_14g626700v5
uniprot id: A8IV40
uniprot id: P07839
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: Forms a complex with heterodimeric ferredoxin-thioredoxin reductase (FTR) and thioredoxin.
messages: chloroplast

3055:CHLRE 07g340850v5
gene id: 3055:CHLRE_07g340850v5
uniprot id: A8ITR3
names: Similarity
messages: Belongs to the cytochrome P450 family.

3055:CHLRE 05g238332v5
gene id: 3055:CHLRE_05g238332v5
uniprot id: Q39615
uniprot id: Q5NKW4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaD family.
messages: PsaD can form complexes with ferredoxin and ferredoxin-oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein.
messages: chloroplast thylakoid membrane

3055:CHLRE 02g079200v5
gene id: 3055:CHLRE_02g079200v5
uniprot id: A0A0I9QPW6
names: Similarity
messages: Belongs to the NFYB/HAP3 subunit family.

3055:CHLRE 06g311950v5
gene id: 3055:CHLRE_06g311950v5
uniprot id: A8ILW6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Membrane

3055:CHLRE 06g278210v5
gene id: 3055:CHLRE_06g278210v5
uniprot id: A8J8Z1
names: Similarity
messages: Belongs to the phosphohexose mutase family.

3055:CHLRE 06g248800v5
gene id: 3055:CHLRE_06g248800v5
uniprot id: A8HYZ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SLX9 family.
messages: nucleolus

3055:CHLRE 07g354551v5
gene id: 3055:CHLRE_07g354551v5
uniprot id: A8JFU2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP65 family.
messages: Cytoplasm
messages: May play a role in flagellar formation and mobility.
messages: flagellum membrane

3055:CHLRE 03g160450v5
gene id: 3055:CHLRE_03g160450v5
uniprot id: A8J7C9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat KATNB1 family.
messages: May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
messages: cytoskeleton

3055:CHLRE 12g503550v5
gene id: 3055:CHLRE_12g503550v5
uniprot id: A8IJL3
names: Similarity
names: Subunit
messages: Belongs to the IspF family.
messages: Homotrimer.

3055:CHLRE 01g012050v5
gene id: 3055:CHLRE_01g012050v5
uniprot id: A8HPB4
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g299000v5
gene id: 3055:CHLRE_06g299000v5
uniprot id: A8IP00
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL21 family.

3055:CHLRE 02g095093v5
gene id: 3055:CHLRE_02g095093v5
uniprot id: A8JEK8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DSS1/SEM1 family.
messages: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins.
messages: Nucleus

3055:CHLRE 06g264800v5
gene id: 3055:CHLRE_06g264800v5
uniprot id: A8HWX5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 14g613400v5
gene id: 3055:CHLRE_14g613400v5
uniprot id: A8JAN3
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat WDR90/POC16 family.
messages: Mutants display shorter flagella and cannot swim.
messages: Required for flagellum assembly and/or maintenance.
messages: centriole

3055:CHLRE 07g325400v5
gene id: 3055:CHLRE_07g325400v5
uniprot id: A8I7N8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the isocitrate and isopropylmalate dehydrogenases family.
messages: Binds 1 Mg(2+) or Mn(2+) ion per subunit.
messages: Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
messages: Homodimer.

3055:CHLRE 09g394701v5
gene id: 3055:CHLRE_09g394701v5
uniprot id: M1ZMJ6
names: Similarity
messages: Belongs to the BolA/IbaG family.

3055:CHLRE 01g024850v5
gene id: 3055:CHLRE_01g024850v5
uniprot id: A8HQ36
names: Similarity
messages: Belongs to the MPI phosphatase family.

3055:CHLRE 03g158950v5
gene id: 3055:CHLRE_03g158950v5
uniprot id: A8J7F5
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 16g651050v5
gene id: 3055:CHLRE_16g651050v5
uniprot id: A8J9G6
uniprot id: P08197
names: Function
names: Induction
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the cytochrome c family. PetJ subfamily.
messages: Binds 1 heme c group covalently per subunit.
messages: Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.
messages: Induced in copper-deficient medium.
messages: Thought to function as a monomer, however 2 crystal forms are observed; a homodimer and homotrimer, suggesting the protein oligomerizes.
messages: chloroplast thylakoid lumen

3055:CHLRE 01g049750v5
gene id: 3055:CHLRE_01g049750v5
uniprot id: A8HNB1
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 08g372450v5
gene id: 3055:CHLRE_08g372450v5
uniprot id: A8JEV1
uniprot id: P12852
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the psbQ family.
messages: chloroplast thylakoid membrane

3055:CHLRE 06g276600v5
gene id: 3055:CHLRE_06g276600v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 02g108400v5
gene id: 3055:CHLRE_02g108400v5
uniprot id: A8I3Q3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DAD/OST2 family.
messages: Component of the oligosaccharyltransferase (OST) complex.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.

3055:CHLRE 14g616750v5
gene id: 3055:CHLRE_14g616750v5
uniprot id: A8HNS4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal targeting signal receptor family.
messages: Cytoplasm
messages: Membrane

3055:CHLRE 16g662300v5
gene id: 3055:CHLRE_16g662300v5
uniprot id: A8J8R7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the snRNP Sm proteins family.
messages: Binds specifically to the 3'-terminal U-tract of U6 snRNA.
messages: LSm subunits form a heteromer with a doughnut shape.
messages: Nucleus

3055:CHLRE 07g341550v5
gene id: 3055:CHLRE_07g341550v5
uniprot id: A8ITQ1
names: Similarity
messages: Belongs to the p23/wos2 family.

3055:CHLRE 02g114400v5
gene id: 3055:CHLRE_02g114400v5
uniprot id: A0A2K3E372
uniprot id: A8I2V9
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the radical SAM superfamily. Lipoyl synthase family.
messages: Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
messages: chloroplast

3055:CHLRE 12g485800v5
gene id: 3055:CHLRE_12g485800v5
uniprot id: A8IL08
names: Similarity
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the N-terminal section; belongs to the AAA ATPase family.

3055:CHLRE 17g734450v5
gene id: 3055:CHLRE_17g734450v5
uniprot id: A8IW44
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.

3055:CHLRE 09g387726v5
gene id: 3055:CHLRE_09g387726v5
uniprot id: A8J129
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.
messages: In eukaryotes there are cytoplasmic, mitochondrial and chloroplastic isozymes.

3055:CHLRE 12g549550v5
gene id: 3055:CHLRE_12g549550v5
uniprot id: A8IXZ0
uniprot id: P04690
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: The 2 beta-tubulin genes of Chlamydomonas (beta-1 and beta-2) encode the same protein.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: cytoskeleton

3055:CHLRE 17g724300v5
gene id: 3055:CHLRE_17g724300v5
uniprot id: A8J6K8
uniprot id: P14225
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaG/PsaK family.
messages: Membrane
messages: chloroplast thylakoid membrane

3055:CHLRE 06g278163v5
gene id: 3055:CHLRE_06g278163v5
uniprot id: A8J933
names: Similarity
messages: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

3055:CHLRE 17g709100v5
gene id: 3055:CHLRE_17g709100v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 16g691440v5
gene id: 3055:CHLRE_16g691440v5
uniprot id: A8JAF2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP43 family.
messages: Flagellar protein involved in flagellum axoneme organization and function.
messages: flagellum
messages: flagellum axoneme

3055:CHLRE 13g566850v5
gene id: 3055:CHLRE_13g566850v5
uniprot id: A8HRW0
names: Similarity
messages: Belongs to the HEBP family.

3055:CHLRE 06g275900v5
gene id: 3055:CHLRE_06g275900v5
uniprot id: Q39576
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone H1/H5 family.
messages: Nucleus

3055:CHLRE 12g503000v5
gene id: 3055:CHLRE_12g503000v5
uniprot id: A8IJH7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family.
messages: Membrane

3055:CHLRE 02g088000v5
gene id: 3055:CHLRE_02g088000v5
uniprot id: A8I8V6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the prohibitin family.
messages: Component of a prohibitin multimeric complex in mitochondrial membranes.
messages: Mitochondrion inner membrane

3055:CHLRE 12g514500v5
gene id: 3055:CHLRE_12g514500v5
uniprot id: A8JHC3
names: Similarity
messages: Belongs to the universal ribosomal protein uS17 family.

3055:CHLRE 07g339750v5
gene id: 3055:CHLRE_07g339750v5
uniprot id: Q9ATG8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ferrochelatase family.
messages: Catalyzes the ferrous insertion into protoporphyrin IX.
messages: chloroplast

3055:CHLRE 16g676250v5
gene id: 3055:CHLRE_16g676250v5
uniprot id: A8J3N0
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 10g420350v5
gene id: 3055:CHLRE_10g420350v5
uniprot id: A8ICV4
uniprot id: P12352
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PsaE family.
messages: Interacts with ALB3.1, which is essential for its insertion into thylakoid membrane.
messages: Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase.
messages: chloroplast thylakoid membrane

3055:CHLRE 12g500950v5
gene id: 3055:CHLRE_12g500950v5
uniprot id: A8IJ60
names: Similarity
messages: Belongs to the peptidase S14 family.

3055:CHLRE 01g058521v5
gene id: 3055:CHLRE_01g058521v5
uniprot id: A8JCS3
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
messages: Endoplasmic reticulum membrane
messages: Required for N-linked oligosaccharide assembly.

3055:CHLRE 06g268350v5
gene id: 3055:CHLRE_06g268350v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 06g276550v5
gene id: 3055:CHLRE_06g276550v5
uniprot id: A8JIN6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g253350v5
gene id: 3055:CHLRE_06g253350v5
uniprot id: A8HYD5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GcvH family.
messages: Binds 1 lipoyl cofactor covalently.
messages: Mitochondrion
messages: The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

3055:CHLRE 03g173900v5
gene id: 3055:CHLRE_03g173900v5
uniprot id: A8IE95
names: Similarity
messages: Belongs to the RING-type zinc finger family. LOG2 subfamily.

3055:CHLRE 10g423350v5
gene id: 3055:CHLRE_10g423350v5
uniprot id: A8ICG2
names: Similarity
messages: Belongs to the TLS1 family.

3055:CHLRE 07g328450v5
gene id: 3055:CHLRE_07g328450v5
uniprot id: A8IHH3
names: Similarity
messages: Belongs to the EAF6 family.

3055:CHLRE 02g114800v5
gene id: 3055:CHLRE_02g114800v5
uniprot id: A8I2U5
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 02g144100v5
gene id: 3055:CHLRE_02g144100v5
uniprot id: A8J0T3
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 47 family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3055:CHLRE 07g319900v5
gene id: 3055:CHLRE_07g319900v5
uniprot id: A8I6W9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RRP40 family.
messages: Cytoplasm

3055:CHLRE 10g435500v5
gene id: 3055:CHLRE_10g435500v5
uniprot id: A8IGK2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.
messages: Belongs to the EF-Ts family.
messages: Mitochondrion
messages: This protein may be expected to contain an N-terminal transit peptide but none has been predicted.

3055:CHLRE 01g038300v5
gene id: 3055:CHLRE_01g038300v5
uniprot id: A8HMB7
names: Similarity
messages: Belongs to the mTERF family.

3055:CHLRE 02g118950v5
gene id: 3055:CHLRE_02g118950v5
uniprot id: A8JGS2
names: Similarity
messages: Belongs to the universal ribosomal protein uS17 family.

3055:CHLRE 06g294750v5
gene id: 3055:CHLRE_06g294750v5
uniprot id: A8JFJ1
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g251300v5
gene id: 3055:CHLRE_06g251300v5
uniprot id: A8HYN9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the snRNP Sm proteins family.
messages: Binds specifically to the 3'-terminal U-tract of U6 snRNA.
messages: LSm subunits form a heteromer with a doughnut shape.
messages: Nucleus

3055:CHLRE 17g699600v5
gene id: 3055:CHLRE_17g699600v5
uniprot id: A8IQL7
names: Similarity
messages: Belongs to the FBPase class 1 family.

3055:CHLRE 16g690500v5
gene id: 3055:CHLRE_16g690500v5
uniprot id: A8JB67
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic ribosomal protein eL8 family.
messages: Common component of the spliceosome and rRNA processing machinery.
messages: nucleolus

3055:CHLRE 01g039750v5
gene id: 3055:CHLRE_01g039750v5
uniprot id: A8HMG1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the polypeptide deformylase family.
messages: Removes the formyl group from the N-terminal Met of newly synthesized proteins.
messages: chloroplast

3055:CHLRE 03g159300v5
gene id: 3055:CHLRE_03g159300v5
uniprot id: A8J7F0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0220 family.
messages: Membrane

3055:CHLRE 06g278188v5
gene id: 3055:CHLRE_06g278188v5
uniprot id: Q6UKY7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFB7 subunit family.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Mitochondrion intermembrane space

3055:CHLRE 06g280850v5
gene id: 3055:CHLRE_06g280850v5
uniprot id: A8J212
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1B family.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: Nucleus

3055:CHLRE 01g026100v5
gene id: 3055:CHLRE_01g026100v5
uniprot id: A8HQ64
names: Similarity
messages: Belongs to the eukaryotic/archaeal RNase P protein component 2 family.

3055:CHLRE 17g707750v5
gene id: 3055:CHLRE_17g707750v5
uniprot id: A8IRA1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nurim family.
messages: Membrane
messages: Nucleus inner membrane

3055:CHLRE 17g713400v5
gene id: 3055:CHLRE_17g713400v5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 02g094500v5
gene id: 3055:CHLRE_02g094500v5
uniprot id: A8I9N6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS21 family.

3055:CHLRE 09g394917v5
gene id: 3055:CHLRE_09g394917v5
uniprot id: A8J0C2
names: Similarity
messages: Belongs to the RMD1/sif2 family.

3055:CHLRE 16g661450v5
gene id: 3055:CHLRE_16g661450v5
uniprot id: A8J8Q1
names: Similarity
messages: Belongs to the histone H3 family.

3055:CHLRE 03g145087v5
gene id: 3055:CHLRE_03g145087v5
uniprot id: A8J339
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 17g710500v5
gene id: 3055:CHLRE_17g710500v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g550650v5
gene id: 3055:CHLRE_12g550650v5
uniprot id: A8IYH4
names: Similarity
messages: Belongs to the universal ribosomal protein uL14 family.

3055:CHLRE 11g467718v5
gene id: 3055:CHLRE_11g467718v5
uniprot id: A8IK66
names: Similarity
messages: Belongs to the HscB family.

3055:CHLRE 17g711800v5
gene id: 3055:CHLRE_17g711800v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 17g714050v5
gene id: 3055:CHLRE_17g714050v5
uniprot id: A8JDC9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g254400v5
gene id: 3055:CHLRE_06g254400v5
uniprot id: A8HYA9
names: Similarity
names: Subunit
messages: Belongs to the class-I fumarase family.
messages: Homodimer.

3055:CHLRE 07g355500v5
gene id: 3055:CHLRE_07g355500v5
uniprot id: A8JFV4
names: Similarity
messages: Belongs to the yippee family.

3055:CHLRE 07g351750v5
gene id: 3055:CHLRE_07g351750v5
uniprot id: A8IU94
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the EBP2 family.
messages: nucleolus

3055:CHLRE 03g190850v5
gene id: 3055:CHLRE_03g190850v5
uniprot id: A8IRX0
names: Similarity
messages: Belongs to the enoyl-CoA hydratase/isomerase family.

3055:CHLRE 16g677026v5
gene id: 3055:CHLRE_16g677026v5
uniprot id: A8JBC6
names: Function
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
messages: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.

3055:CHLRE 02g082350v5
gene id: 3055:CHLRE_02g082350v5
uniprot id: A8I832
names: Similarity
messages: Belongs to the CutA family.

3055:CHLRE 06g249150v5
gene id: 3055:CHLRE_06g249150v5
uniprot id: A8HYY7
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 12g511200v5
gene id: 3055:CHLRE_12g511200v5
uniprot id: Q6TH88
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFS5 subunit family.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 13g567700v5
gene id: 3055:CHLRE_13g567700v5
uniprot id: A8HRZ9
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 01g028350v5
gene id: 3055:CHLRE_01g028350v5
uniprot id: A8HQB3
names: Similarity
messages: Belongs to the peptidase S1C family.

3055:CHLRE 17g714100v5
gene id: 3055:CHLRE_17g714100v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g250750v5
gene id: 3055:CHLRE_06g250750v5
uniprot id: A8HYR9
names: Similarity
messages: Belongs to the peptidase C19 family.

3055:CHLRE 14g614300v5
gene id: 3055:CHLRE_14g614300v5
uniprot id: A8JAP7
names: Activity Regulation
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IMPDH/GMPR family.
messages: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
messages: Cytoplasm
messages: Homotetramer.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mycophenolic acid (MPA) is a non-competitive inhibitor that prevents formation of the closed enzyme conformation by binding to the same site as the amobile flap. In contrast, mizoribine monophosphate (MZP) is a competitive inhibitor that induces the closed conformation. MPA is a potent inhibitor of mammalian IMPDHs but a poor inhibitor of the bacterial enzymes. MZP is a more potent inhibitor of bacterial IMPDH.

3055:CHLRE 14g622850v5
gene id: 3055:CHLRE_14g622850v5
uniprot id: Q6Q242
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RecA family. RAD51 subfamily.
messages: Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination.
messages: Nucleus

3055:CHLRE 16g668950v5
gene id: 3055:CHLRE_16g668950v5
uniprot id: A8JB30
names: Similarity
messages: Belongs to the peptidase M14 family.

3055:CHLRE 06g295200v5
gene id: 3055:CHLRE_06g295200v5
uniprot id: A8JFI1
names: Similarity
messages: Belongs to the DNA photolyase class-1 family.

3055:CHLRE 06g279100v5
gene id: 3055:CHLRE_06g279100v5
uniprot id: A8J1X7
names: Similarity
messages: Belongs to the dpy-30 family.

3055:CHLRE 02g073750v5
gene id: 3055:CHLRE_02g073750v5
uniprot id: A8I9T2
names: Similarity
messages: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

3055:CHLRE 10g426750v5
gene id: 3055:CHLRE_10g426750v5
uniprot id: A8IC18
names: Similarity
messages: Belongs to the cytochrome P450 family.

3055:CHLRE 13g588550v5
gene id: 3055:CHLRE_13g588550v5
uniprot id: A8HUY7
names: Similarity
messages: Belongs to the syntaxin family.

3055:CHLRE 17g714000v5
gene id: 3055:CHLRE_17g714000v5
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 09g412100v5
gene id: 3055:CHLRE_09g412100v5
uniprot id: A8J4S1
uniprot id: P12356
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaF family.
messages: Participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI.
messages: Probably participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI.
messages: chloroplast thylakoid lumen

3055:CHLRE 06g264350v5
gene id: 3055:CHLRE_06g264350v5
uniprot id: A8HWZ6
names: Similarity
messages: Belongs to the universal ribosomal protein uL13 family.

3055:CHLRE 10g427550v5
gene id: 3055:CHLRE_10g427550v5
uniprot id: A8IBZ0
names: Similarity
messages: Belongs to the MNN1/MNT family.

3055:CHLRE 03g144627v5
gene id: 3055:CHLRE_03g144627v5
uniprot id: A8J355
names: Similarity
messages: Belongs to the trans-sulfuration enzymes family.

3055:CHLRE 17g696350v5
gene id: 3055:CHLRE_17g696350v5
uniprot id: A8IQZ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM38 family.
messages: Membrane

3055:CHLRE 02g116300v5
gene id: 3055:CHLRE_02g116300v5
uniprot id: A8I2N9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SPT4 family.
messages: Nucleus

3055:CHLRE 06g265000v5
gene id: 3055:CHLRE_06g265000v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 06g278213v5
gene id: 3055:CHLRE_06g278213v5
uniprot id: Q75VY6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 08g364450v5
gene id: 3055:CHLRE_08g364450v5
uniprot id: A8J3X9
names: Similarity
messages: Belongs to the acetyltransferase family. ARD1 subfamily.

3055:CHLRE 07g352850v5
gene id: 3055:CHLRE_07g352850v5
uniprot id: A8IUC3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

3055:CHLRE 12g499000v5
gene id: 3055:CHLRE_12g499000v5
uniprot id: A8JGI7
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 16g689650v5
gene id: 3055:CHLRE_16g689650v5
uniprot id: A8JB85
names: Similarity
messages: Belongs to the ATG8 family.

3055:CHLRE 06g276950v5
gene id: 3055:CHLRE_06g276950v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g278242v5
gene id: 3055:CHLRE_06g278242v5
uniprot id: A8J8W4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I LYR family. SDHAF3 subfamily.
messages: Interacts with the iron-sulfur protein subunit within the SDH catalytic dimer.
messages: Mitochondrion matrix
messages: Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Promotes maturation of the iron-sulfur protein subunit of the SDH catalytic dimer, protecting it from the deleterious effects of oxidants. May act together with SDHAF1.

3055:CHLRE 05g244901v5
gene id: 3055:CHLRE_05g244901v5
uniprot id: Q6QIV8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFB3 subunit family.
messages: Mitochondrion inner membrane

3055:CHLRE 01g011000v5
gene id: 3055:CHLRE_01g011000v5
uniprot id: A8HP90
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL6 family.

3055:CHLRE 10g457500v5
gene id: 3055:CHLRE_10g457500v5
uniprot id: A8I0Q1
names: Similarity
messages: Belongs to the 5'-AMP-activated protein kinase beta subunit family.

3055:CHLRE 01g029300v5
gene id: 3055:CHLRE_01g029300v5
uniprot id: Q5S7Y5
names: Similarity
names: Subunit
messages: Belongs to the triosephosphate isomerase family.
messages: Homodimer.

3055:CHLRE 06g268400v5
gene id: 3055:CHLRE_06g268400v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 03g195650v5
gene id: 3055:CHLRE_03g195650v5
uniprot id: A8IWQ1
names: Similarity
messages: Belongs to the universal ribosomal protein uS10 family.

3055:CHLRE 02g114600v5
gene id: 3055:CHLRE_02g114600v5
uniprot id: A8I2V3
names: Function
names: Similarity
messages: Belongs to the peroxiredoxin family.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively.

3055:CHLRE 06g276850v5
gene id: 3055:CHLRE_06g276850v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 17g709150v5
gene id: 3055:CHLRE_17g709150v5
uniprot id: A8IR69
uniprot id: P54346
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 10g456000v5
gene id: 3055:CHLRE_10g456000v5
uniprot id: A8I0H0
names: Similarity
messages: Belongs to the WrbA family.

3055:CHLRE 03g199800v5
gene id: 3055:CHLRE_03g199800v5
uniprot id: Q9FYU1
names: Similarity
messages: Belongs to the NARF family.

3055:CHLRE 10g423650v5
gene id: 3055:CHLRE_10g423650v5
uniprot id: A8ICE4
names: Similarity
messages: Belongs to the universal ribosomal protein uL11 family.

3055:CHLRE 01g045350v5
gene id: 3055:CHLRE_01g045350v5
uniprot id: A8HMZ4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DRC5 family.
messages: Component of the nexin-dynein regulatory complex (N-DRC) a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:23427265, PubMed:25411337). May play a role in the assembly of N-DRC (PubMed:23427265).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of at least DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:23427265, PubMed:25411337). Interacts with DRC1, DRC2, DRC3, DRC4, DRC7 and DRC11 (PubMed:25411337).
messages: Defects in DRC5 give the sup-pf4 phenotype characterized by disruption of the assembly of several other N-DRC subunits.
messages: flagellum
messages: flagellum axoneme

3055:CHLRE 08g386050v5
gene id: 3055:CHLRE_08g386050v5
uniprot id: A8IYX5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane

3055:CHLRE 10g456100v5
gene id: 3055:CHLRE_10g456100v5
uniprot id: Q19VH5
names: Similarity
messages: Belongs to the WrbA family.

3055:CHLRE 03g169550v5
gene id: 3055:CHLRE_03g169550v5
uniprot id: Q9FE26
names: Cofactor
names: Similarity
messages: Belongs to the alternative oxidase family.
messages: Binds 2 iron ions per subunit.

3055:CHLRE 06g264900v5
gene id: 3055:CHLRE_06g264900v5
uniprot id: A8HWX1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 16g682900v5
gene id: 3055:CHLRE_16g682900v5
uniprot id: A8IS47
names: Similarity
messages: Belongs to the peptidase S14 family.

3055:CHLRE 16g666550v5
gene id: 3055:CHLRE_16g666550v5
uniprot id: A8JF62
names: Similarity
messages: Belongs to the HEBP family.

3055:CHLRE 12g548400v5
gene id: 3055:CHLRE_12g548400v5
uniprot id: Q93WE0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 17g698365v5
gene id: 3055:CHLRE_17g698365v5
uniprot id: A8IQT2
names: Disruption Phenotype
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Asymmetrically dimethylated at Arg-246 and Arg-523 during flagellum resorption. Probably methylated by PRMT1.
messages: Belongs to the CCDC40 family.
messages: Interacts with CCDC39/FAP59.
messages: Required for assembly of dynein regulatory complex (DRC) and inner dynein arm complexes, which are responsible for ciliary beat regulation, by acting as a molecular ruler that determines the 96 nanometer (nm) repeat length and arrangements of components in cilia and flagella (PubMed:25395538). Together with CCDC39/FAP59 forms a 96-nm-long complex in flagella. This complex does not act as a physical ruler, but rather act as a negative regulator for radial spokes: the complex lays along specific protofilaments, masking radial spoke binding sites and allowing recruitment of inner dynein arm (IDA) and nexin-dynein regulatory complexes (N-DRC) (PubMed:25395538).
messages: Short and immotile flagella. Inner dynein arm (IDA) and nexin-dynein regulatory complex (N-DRC) components are absent or severely reduced. Radial spokes are attached to doublet microtubules with an irregular periodicity of 32 nm instead of 96 nm.
messages: flagellum

3055:CHLRE 12g508700v5
gene id: 3055:CHLRE_12g508700v5
uniprot id: A8IKC6
names: Similarity
messages: Belongs to the glycosyltransferase 64 family.

3055:CHLRE 07g314650v5
gene id: 3055:CHLRE_07g314650v5
uniprot id: A8I670
names: Similarity
messages: Belongs to the RecA family.

3055:CHLRE 10g424400v5
gene id: 3055:CHLRE_10g424400v5
uniprot id: A8ICB3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1B family.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: Nucleus

3055:CHLRE 17g730200v5
gene id: 3055:CHLRE_17g730200v5
uniprot id: A8JFH6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat peroxin-7 family.
messages: Cytoplasm

3055:CHLRE 02g118850v5
gene id: 3055:CHLRE_02g118850v5
uniprot id: A8JGS4
names: Similarity
messages: Belongs to the ACBP family.

3055:CHLRE 09g410950v5
gene id: 3055:CHLRE_09g410950v5
uniprot id: A8J4P9
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the nitrate reductase family.
messages: Binds 1 Mo-molybdopterin (Mo-MPT) cofactor per subunit.
messages: Homodimer.
messages: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.

3055:CHLRE 10g453600v5
gene id: 3055:CHLRE_10g453600v5
uniprot id: A0A2K3DBB8
uniprot id: Q2HWK7
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome b5 family.
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Front-end desaturase having a omega-13 desaturase activity for omega-9 unsaturated C18/C20 fatty acids. Strong substrate preferences for linoleic acid and alpha-linolenic acid for the production of pinolenic and coniferonic acids respectively. No desaturase activity for dihomo gamma-linolenic acid and eicosatertraenoic acid.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: The histidine box domains may contain the active site and/or be involved in metal ion binding.

3055:CHLRE 13g568850v5
gene id: 3055:CHLRE_13g568850v5
uniprot id: Q944M9
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the NifU family.
messages: Mitochondrion matrix
messages: Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.

3055:CHLRE 07g331900v5
gene id: 3055:CHLRE_07g331900v5
uniprot id: A8IGY1
names: Similarity
messages: Belongs to the universal ribosomal protein uS15 family.

3055:CHLRE 12g498600v5
gene id: 3055:CHLRE_12g498600v5
uniprot id: A8HX38
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
messages: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
messages: chloroplast

3055:CHLRE 06g264200v5
gene id: 3055:CHLRE_06g264200v5
uniprot id: A8HX04
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Binds 1 [3Fe-4S] cluster.
messages: Binds 1 [4Fe-4S] cluster.
messages: Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.
messages: Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
messages: Mitochondrion inner membrane

3055:CHLRE 13g590800v5
gene id: 3055:CHLRE_13g590800v5
uniprot id: A8HWF6
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 05g242550v5
gene id: 3055:CHLRE_05g242550v5
uniprot id: Q01657
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Asymmetrically dimethylated at Arg-267 and Arg-398 during flagellum resorption. Probably methylated by PRMT1.
messages: Belongs to the flagellar radial spoke RSP4/6 family.
messages: Flagellar radial spokes contribute to the regulation of dynein arm activity and thus the pattern of flagellar bending. They consist of a thin stalk, which is attached to the a subfiber of the outer doublet microtubule, and a bulbous head, which is attached to the stalk and appears to interact with the projections from the central pair of microtubules.
messages: The radial spoke head is made of five different polypeptides (RSP1, RSP4, RSP6, RSP9, and RSP10).
messages: flagellum axoneme

3055:CHLRE 06g280900v5
gene id: 3055:CHLRE_06g280900v5
uniprot id: A8J213
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GOSR1 family.
messages: Golgi apparatus membrane
messages: Membrane

3055:CHLRE 02g117500v5
gene id: 3055:CHLRE_02g117500v5
uniprot id: A8JGU7
names: Similarity
messages: Belongs to the hexokinase family.

3055:CHLRE 10g451950v5
gene id: 3055:CHLRE_10g451950v5
uniprot id: A8HZZ4
names: Similarity
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. Alanine aminotransferase subfamily.
messages: Homodimer.

3055:CHLRE 13g576300v5
gene id: 3055:CHLRE_13g576300v5
uniprot id: A8HT86
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the APH-1 family.
messages: Membrane

3055:CHLRE 17g731300v5
gene id: 3055:CHLRE_17g731300v5
uniprot id: A8JFF7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GDT1 family.
messages: Membrane

3055:CHLRE 01g050950v5
gene id: 3055:CHLRE_01g050950v5
uniprot id: A8HNE8
names: Similarity
messages: Belongs to the geranylgeranyl reductase family. ChlP subfamily.

3055:CHLRE 14g617600v5
gene id: 3055:CHLRE_14g617600v5
uniprot id: A8HNV3
names: Similarity
messages: Belongs to the peptidase S1C family.

3055:CHLRE 06g296400v5
gene id: 3055:CHLRE_06g296400v5
uniprot id: A8IPE0
names: Similarity
messages: Belongs to the acyl-CoA dehydrogenase family.

3055:CHLRE 12g505200v5
gene id: 3055:CHLRE_12g505200v5
uniprot id: A8IJV1
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX47/RRP3 subfamily.

3055:CHLRE 02g145250v5
gene id: 3055:CHLRE_02g145250v5
uniprot id: A8J0V6
names: Cofactor
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS27 family.
messages: Binds 1 zinc ion per subunit.

3055:CHLRE 04g213400v5
gene id: 3055:CHLRE_04g213400v5
uniprot id: A8J9U4
names: Similarity
messages: Belongs to the peptidase S8 family.

3055:CHLRE 12g533550v5
gene id: 3055:CHLRE_12g533550v5
uniprot id: A8IVR6
names: Similarity
messages: Belongs to the pyruvate kinase family.

3055:CHLRE 14g617450v5
gene id: 3055:CHLRE_14g617450v5
uniprot id: A8HNU9
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

3055:CHLRE 06g265400v5
gene id: 3055:CHLRE_06g265400v5
uniprot id: A8HV98
uniprot id: P54347
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 02g073900v5
gene id: 3055:CHLRE_02g073900v5
uniprot id: A8I9T9
names: Similarity
messages: Belongs to the carotenoid oxygenase family.

3055:CHLRE 02g073550v5
gene id: 3055:CHLRE_02g073550v5
uniprot id: A2BCY1
names: Similarity
messages: Belongs to the nucleosome assembly protein (NAP) family.

3055:CHLRE 13g584850v5
gene id: 3055:CHLRE_13g584850v5
uniprot id: A8HUC9
names: Similarity
messages: Belongs to the GST superfamily.

3055:CHLRE 12g548650v5
gene id: 3055:CHLRE_12g548650v5
uniprot id: A8IYF1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BBS4 family.
messages: Membrane
messages: centrosome
messages: cilium membrane

3055:CHLRE 12g542850v5
gene id: 3055:CHLRE_12g542850v5
uniprot id: A8IY04
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acireductone dioxygenase (ARD) family.
messages: Binds either 1 Fe or Ni cation per monomer. Iron-binding promotes an acireductone dioxygenase reaction producing 2-keto-4-methylthiobutyrate, while nickel-binding promotes an acireductone dioxygenase reaction producing 3-(methylsulfanyl)propanoate.
messages: Catalyzes 2 different reactions between oxygen and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4-methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
messages: Cytoplasm
messages: Nucleus

3055:CHLRE 12g545000v5
gene id: 3055:CHLRE_12g545000v5
uniprot id: A8IY68
names: Similarity
messages: Belongs to the actin family.

3055:CHLRE 06g274850v5
gene id: 3055:CHLRE_06g274850v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 01g025450v5
gene id: 3055:CHLRE_01g025450v5
uniprot id: A8HQ54
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DRC9 family.
messages: Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:23427265, PubMed:25411337).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of at least DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:23427265, PubMed:25411337).
messages: flagellum axoneme

3055:CHLRE 10g426600v5
gene id: 3055:CHLRE_10g426600v5
uniprot id: A8IC26
names: Similarity
messages: Belongs to the cytochrome P450 family.

3055:CHLRE 12g555450v5
gene id: 3055:CHLRE_12g555450v5
uniprot id: A8IYR0
names: Function
names: Similarity
messages: Belongs to the inositol phosphokinase (IPK) family.
messages: Inositol phosphate kinase with a broad substrate specificity.

3055:CHLRE 06g264650v5
gene id: 3055:CHLRE_06g264650v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 14g619550v5
gene id: 3055:CHLRE_14g619550v5
uniprot id: A8HP17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase T1A family.
messages: Cytoplasm
messages: Nucleus

3055:CHLRE 06g271100v5
gene id: 3055:CHLRE_06g271100v5
uniprot id: A8HVZ5
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 07g336950v5
gene id: 3055:CHLRE_07g336950v5
uniprot id: Q2VA40
names: Function
names: Similarity
messages: Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.
messages: Belongs to the glycogen phosphorylase family.

3055:CHLRE 03g156950v5
gene id: 3055:CHLRE_03g156950v5
uniprot id: A8J7I9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UQCRQ/QCR8 family.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 06g252300v5
gene id: 3055:CHLRE_06g252300v5
uniprot id: A8HYI5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PDK/BCKDK protein kinase family.
messages: Mitochondrion matrix

3055:CHLRE 07g346050v5
gene id: 3055:CHLRE_07g346050v5
uniprot id: A8ITX0
uniprot id: Q9LD46
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AcsF family.
messages: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis under oxygen- and copper-deficient conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME).
messages: Induced in absence of copper and oxygen. Regulated by CRR1 protein, which activates its transcription in absence of copper.
messages: chloroplast thylakoid membrane

3055:CHLRE 04g214503v5
gene id: 3055:CHLRE_04g214503v5
uniprot id: A8J9T0
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS12 family.

3055:CHLRE 02g075700v5
gene id: 3055:CHLRE_02g075700v5
uniprot id: A8IA18
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL19 family.

3055:CHLRE 06g278256v5
gene id: 3055:CHLRE_06g278256v5
uniprot id: A8J8V5
names: Similarity
messages: Belongs to the peptidase M67A family.

3055:CHLRE 06g262250v5
gene id: 3055:CHLRE_06g262250v5
uniprot id: A8HXA2
names: Similarity
messages: Belongs to the adaptor complexes medium subunit family.

3055:CHLRE 12g492950v5
gene id: 3055:CHLRE_12g492950v5
uniprot id: A8JDR3
names: Function
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase large chain family.
messages: Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.

3055:CHLRE 10g427300v5
gene id: 3055:CHLRE_10g427300v5
uniprot id: A0A2K3D9K7
uniprot id: Q6UBQ3
names: Disruption Phenotype
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Absence of radial spokes.
messages: Asymmetrically dimethylated at Arg-104, Arg-260, Arg-453, Arg-538 and Arg-615 during flagellum resorption. Probably methylated by PRMT1.
messages: Belongs to the dpy-30 family.
messages: Flagellar radial spokes contribute to the regulation of dynein arm activity and thus the pattern of flagellar bending. They consist of a thin stalk, which is attached to the a subfiber of the outer doublet microtubule, and a bulbous head, which is attached to the stalk and appears to interact with the projections from the central pair of microtubules (PubMed:16507594). Binds calmodulin in a calcium-dependent manner (PubMed:14871938).
messages: In-gel analysis assays show kinase-like activity in vitro. However, such activity has not been confirmed using recombinant protein.
messages: flagellum axoneme

3055:CHLRE 02g073650v5
gene id: 3055:CHLRE_02g073650v5
uniprot id: A8I9S6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the WD repeat PRP19 family.
messages: Homotetramer.
messages: Nucleus
messages: Ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair. Required for pre-mRNA splicing as component of the spliceosome.

3055:CHLRE 08g385200v5
gene id: 3055:CHLRE_08g385200v5
uniprot id: A8IYZ2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP Sm proteins family.
messages: Nucleus
messages: Plays a role in pre-mRNA splicing as a core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.

3055:CHLRE 10g427250v5
gene id: 3055:CHLRE_10g427250v5
uniprot id: Q94KS3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the profilin family.
messages: cytoskeleton

3055:CHLRE 07g314150v5
gene id: 3055:CHLRE_07g314150v5
uniprot id: A8I647
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the zeta carotene desaturase family.
messages: Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
messages: chloroplast
messages: chromoplast

3055:CHLRE 02g088200v5
gene id: 3055:CHLRE_02g088200v5
uniprot id: O48949
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the protein disulfide isomerase family.
messages: Endoplasmic reticulum lumen

3055:CHLRE 09g391900v5
gene id: 3055:CHLRE_09g391900v5
uniprot id: P80028
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the thioredoxin family. Plant H-type subfamily.
messages: Cytoplasm
messages: Participates in various redox reactions through the reversible oxidation of the active center dithiol to a disulfide. The H form is known to activate a number of cytosolic enzymes.
messages: This thioredoxin cannot be used as a substrate for E.coli NADPH: thioredoxin reductase, but is a substrate of spinach ferredoxin-thioredoxin reductase and can activate NADP-MDH.

3055:CHLRE 02g145050v5
gene id: 3055:CHLRE_02g145050v5
uniprot id: A8J0V1
names: Similarity
messages: Belongs to the GHMP kinase family. IspE subfamily.

3055:CHLRE 12g511850v5
gene id: 3055:CHLRE_12g511850v5
uniprot id: Q6IV67
names: Similarity
messages: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. GSK-3 subfamily.

3055:CHLRE 06g294650v5
gene id: 3055:CHLRE_06g294650v5
uniprot id: A8JFJ2
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.

3055:CHLRE 03g182650v5
gene id: 3055:CHLRE_03g182650v5
uniprot id: A8JH70
names: Similarity
messages: Belongs to the taffazin family.

3055:CHLRE 12g491050v5
gene id: 3055:CHLRE_12g491050v5
uniprot id: A8ILR9
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase small chain family.

3055:CHLRE 06g251800v5
gene id: 3055:CHLRE_06g251800v5
uniprot id: A8HYL2
names: Similarity
names: Subunit
messages: Belongs to the activator 1 small subunits family.
messages: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can form a complex with RFC1.

3055:CHLRE 01g031200v5
gene id: 3055:CHLRE_01g031200v5
uniprot id: A8HQJ8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SRP14 family.
messages: Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER). SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
messages: Cytoplasm
messages: Heterodimer with SRP9; binds RNA as heterodimer. Component of a signal recognition particle (SRP) complex that consists of a 7SL RNA molecule of 300 nucleotides and six protein subunits: SRP72, SRP68, SRP54, SRP19, SRP14 and SRP9.

3055:CHLRE 03g181500v5
gene id: 3055:CHLRE_03g181500v5
uniprot id: A8JH52
names: Similarity
messages: Belongs to the disproportionating enzyme family.

3055:CHLRE 03g182900v5
gene id: 3055:CHLRE_03g182900v5
uniprot id: A8JH74
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMCO1 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 14g621300v5
gene id: 3055:CHLRE_14g621300v5
uniprot id: A8HP50
names: Similarity
messages: Belongs to the Luc7 family.

3055:CHLRE 14g620400v5
gene id: 3055:CHLRE_14g620400v5
uniprot id: A8HP31
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SPCS3 family.
messages: Endoplasmic reticulum membrane
messages: Essential component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Essential for the SPC catalytic activity, possibly by stabilizing and positioning the active center of the complex close to the lumenal surface.

3055:CHLRE 16g673109v5
gene id: 3055:CHLRE_16g673109v5
uniprot id: Q6UKY4
names: Function
names: Similarity
messages: Belongs to the acyl carrier protein (ACP) family.
messages: Carrier of the growing fatty acid chain in fatty acid biosynthesis.

3055:CHLRE 02g142266v5
gene id: 3055:CHLRE_02g142266v5
uniprot id: A5YU14
names: Similarity
messages: Belongs to the cytochrome P450 family.

3055:CHLRE 02g112850v5
gene id: 3055:CHLRE_02g112850v5
uniprot id: A8I320
names: Similarity
messages: Belongs to the UbiH/COQ6 family.

3055:CHLRE 08g372850v5
gene id: 3055:CHLRE_08g372850v5
uniprot id: A8JEV7
names: Similarity
messages: Belongs to the ZPR1 family.

3055:CHLRE 01g022500v5
gene id: 3055:CHLRE_01g022500v5
uniprot id: A8HPY0
names: Similarity
messages: Belongs to the malic enzymes family.

3055:CHLRE 01g030950v5
gene id: 3055:CHLRE_01g030950v5
uniprot id: A8HQJ0
names: Similarity
messages: Belongs to the CGI121/TPRKB family.

3055:CHLRE 02g097450v5
gene id: 3055:CHLRE_02g097450v5
uniprot id: A8I294
names: Function
names: Similarity
messages: Belongs to the DHNA family.
messages: Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin.

3055:CHLRE 12g533800v5
gene id: 3055:CHLRE_12g533800v5
uniprot id: A8IVQ7
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 13g567800v5
gene id: 3055:CHLRE_13g567800v5
uniprot id: A8HS05
names: Function
names: Similarity
messages: Belongs to the phosphatase 2A regulatory subunit.
messages: The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.

3055:CHLRE 03g201500v5
gene id: 3055:CHLRE_03g201500v5
uniprot id: A8IXM0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SKA2 family.
messages: spindle

3055:CHLRE 16g651550v5
gene id: 3055:CHLRE_16g651550v5
uniprot id: A8J9F6
names: Similarity
messages: Belongs to the mTERF family.

3055:CHLRE 13g592450v5
gene id: 3055:CHLRE_13g592450v5
uniprot id: A8IWB5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COPE family.
messages: Cytoplasm
messages: Membrane
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3055:CHLRE 10g434350v5
gene id: 3055:CHLRE_10g434350v5
uniprot id: Q0ZB35
names: Similarity
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.

3055:CHLRE 06g255450v5
gene id: 3055:CHLRE_06g255450v5
uniprot id: A8HY72
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the retinoblastoma protein (RB) family.
messages: Nucleus

3055:CHLRE 06g256750v5
gene id: 3055:CHLRE_06g256750v5
uniprot id: A8HY17
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acyl-ACP thioesterase family.
messages: Plays an essential role in chain termination during de novo fatty acid synthesis.
messages: chloroplast

3055:CHLRE 03g178150v5
gene id: 3055:CHLRE_03g178150v5
uniprot id: A8IDP6
uniprot id: P04352
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Associates with the spoke-associated complex containing CFAP61, CFAP91 and CFAP251; the association is calcium sensitive.
messages: Belongs to the calmodulin family.
messages: Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
messages: May be involved in calcium-mediated signal transduction.
messages: This protein has four functional calcium-binding sites.
messages: This protein is unusual among eukaryotic calmodulins in having an 11-residue extension of its carboxyl end.
messages: Trimethylation of Lys-119 observed in other calmodulins is absent here.
messages: flagellum axoneme

3055:CHLRE 04g217929v5
gene id: 3055:CHLRE_04g217929v5
uniprot id: A8JEP4
names: Subunit
messages: Homodimer.

3055:CHLRE 06g250350v5
gene id: 3055:CHLRE_06g250350v5
uniprot id: A8HYT4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the unc-50 family.
messages: Membrane

3055:CHLRE 09g388150v5
gene id: 3055:CHLRE_09g388150v5
uniprot id: A8IZK1
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

3055:CHLRE 08g373250v5
gene id: 3055:CHLRE_08g373250v5
uniprot id: A8JEW4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Cytoplasm
messages: Nucleus
messages: The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.

3055:CHLRE 03g150400v5
gene id: 3055:CHLRE_03g150400v5
uniprot id: A8J2P8
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PIGU family.
messages: Component of the GPI transamidase complex. May be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 02g142687v5
gene id: 3055:CHLRE_02g142687v5
uniprot id: A8IL29
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Arf family.
messages: GTP-binding protein involved in protein trafficking; modulates vesicle budding and uncoating within the Golgi apparatus.
messages: Golgi apparatus

3055:CHLRE 13g588100v5
gene id: 3055:CHLRE_13g588100v5
uniprot id: A8HUU9
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 08g382500v5
gene id: 3055:CHLRE_08g382500v5
uniprot id: A8IZ36
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS25 family.

3055:CHLRE 10g432550v5
gene id: 3055:CHLRE_10g432550v5
uniprot id: A8IB39
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g298100v5
gene id: 3055:CHLRE_06g298100v5
uniprot id: A8IP53
names: Function
names: Similarity
messages: Belongs to the SUI1 family.
messages: Probably involved in translation.

3055:CHLRE 06g284250v5
gene id: 3055:CHLRE_06g284250v5
uniprot id: A8J270
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 12g486100v5
gene id: 3055:CHLRE_12g486100v5
uniprot id: A8IL21
names: Similarity
messages: Belongs to the peptidase S14 family.

3055:CHLRE 10g433950v5
gene id: 3055:CHLRE_10g433950v5
uniprot id: A8IAW5
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 05g241637v5
gene id: 3055:CHLRE_05g241637v5
uniprot id: A2T2X4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IFT46 family.
messages: Component of the IFT complex B, the core composed of IFT25, IFT27, IFT46, IFT52, IFT74, IFT81 and IFT88 as well as associated subunits IFT20, IFT57, IFT80 and IFT172. Interacts with IFT25, IFT52, IFT70, IFT88 and DAW1.
messages: Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. Plays a role in maintaining IFT complex B stability.
messages: Individuals have short, non-motile flagellae.
messages: cilium
messages: cilium basal body

3055:CHLRE 07g329800v5
gene id: 3055:CHLRE_07g329800v5
uniprot id: A8IHA8
names: Similarity
messages: Belongs to the HSBP1 family.

3055:CHLRE 01g052350v5
gene id: 3055:CHLRE_01g052350v5
uniprot id: A8HNL1
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

3055:CHLRE 04g223850v5
gene id: 3055:CHLRE_04g223850v5
uniprot id: A8IT25
names: Similarity
messages: Belongs to the DEAD box helicase family.

3055:CHLRE 02g088900v5
gene id: 3055:CHLRE_02g088900v5
uniprot id: A8I8Z4
names: Similarity
messages: Belongs to the universal ribosomal protein uL1 family.

3055:CHLRE 07g322500v5
gene id: 3055:CHLRE_07g322500v5
uniprot id: A8I7A8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL19 family.

3055:CHLRE 11g467569v5
gene id: 3055:CHLRE_11g467569v5
uniprot id: A8JF15
uniprot id: Q42687
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase delta chain family.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: In plastids the F-type ATPase is also known as CF(1)CF(0).
messages: This protein seems to be part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) into CF(1) or is implicated in proton conduction.
messages: chloroplast thylakoid membrane

3055:CHLRE 02g077500v5
gene id: 3055:CHLRE_02g077500v5
uniprot id: A8IA96
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAPP small subunits family.
messages: Endoplasmic reticulum
messages: Part of the multisubunit transport protein particle (TRAPP) complex.
messages: cis-Golgi network

3055:CHLRE 12g517600v5
gene id: 3055:CHLRE_12g517600v5
uniprot id: A8J691
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 16g668800v5
gene id: 3055:CHLRE_16g668800v5
uniprot id: Q6PLP7
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3055:CHLRE 03g146247v5
gene id: 3055:CHLRE_03g146247v5
uniprot id: Q6UP29
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFS4 subunit family.
messages: Mitochondrion inner membrane

3055:CHLRE 03g199983v5
gene id: 3055:CHLRE_03g199983v5
uniprot id: A8JBP0
names: Similarity
messages: Belongs to the PPP phosphatase family.

3055:CHLRE 06g276500v5
gene id: 3055:CHLRE_06g276500v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 17g714250v5
gene id: 3055:CHLRE_17g714250v5
uniprot id: Q39591
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Consists of at least 3 heavy chains (alpha, beta and gamma), 2 intermediate chains and 8 light chains.
messages: May be involved in regulating the redox state of functionally important thiol groups within dynein.
messages: flagellum
messages: flagellum axoneme

3055:CHLRE 09g399030v5
gene id: 3055:CHLRE_09g399030v5
uniprot id: Q70ZL8
names: Cofactor
names: Similarity
messages: Belongs to the 4HPPD family.
messages: Binds 1 Fe cation per subunit.

3055:CHLRE 02g103950v5
gene id: 3055:CHLRE_02g103950v5
uniprot id: A8I4E9
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As part of MIA, a complex associated with the outer doublet microtubules of the axoneme, may play a role in ciliary/flagellar motility by regulating the assembly and the activity of axonemal inner dynein arm.
messages: Belongs to the CFAP100 family.
messages: Interacts with FAP73; form the modifier of inner arm (MIA) complex.
messages: The mia1-1, mia1-2, mia1-3 and mia1-4 mutants do not express the protein in the axoneme and display slightly jerky, slow swimming phenotypes, reduced flagellar beat frequencies and defective phototaxis.
messages: flagellum axoneme

3055:CHLRE 06g274000v5
gene id: 3055:CHLRE_06g274000v5
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 12g512600v5
gene id: 3055:CHLRE_12g512600v5
uniprot id: A8IKZ2
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL18 family.

3055:CHLRE 01g017500v5
gene id: 3055:CHLRE_01g017500v5
uniprot id: A0A2K3E5V1
names: Similarity
messages: Belongs to the SDO1/SBDS family.

3055:CHLRE 03g187200v5
gene id: 3055:CHLRE_03g187200v5
uniprot id: A8IRP4
uniprot id: Q39579
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dynein light chain family.
messages: Consists of at least 3 heavy chains (alpha, beta and gamma), 2 intermediate chains and 8 light chains.
messages: cytoskeleton
messages: flagellum axoneme

3055:CHLRE 12g510050v5
gene id: 3055:CHLRE_12g510050v5
uniprot id: Q9AR22
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AcsF family.
messages: By Copper and oxygen.
messages: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME).
messages: chloroplast

3055:CHLRE 11g479500v5
gene id: 3055:CHLRE_11g479500v5
uniprot id: Q84U22
names: Similarity
messages: Belongs to the universal ribosomal protein uL4 family.

3055:CHLRE 17g726750v5
gene id: 3055:CHLRE_17g726750v5
uniprot id: A8J6Q7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class-II DAHP synthase family.
messages: chloroplast

3055:CHLRE 10g417550v5
gene id: 3055:CHLRE_10g417550v5
uniprot id: A8ID95
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory protein regulating the assembly of the plastid Clp protease system.
messages: Belongs to the ClpA/ClpB family.
messages: chloroplast

3055:CHLRE 01g031050v5
gene id: 3055:CHLRE_01g031050v5
uniprot id: A8HQJ4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SPT5 family.
messages: Nucleus

3055:CHLRE 01g050350v5
gene id: 3055:CHLRE_01g050350v5
uniprot id: A8HNC7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane

3055:CHLRE 17g710400v5
gene id: 3055:CHLRE_17g710400v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g519000v5
gene id: 3055:CHLRE_12g519000v5
uniprot id: A8J650
names: Similarity
messages: Belongs to the TrpF family.

3055:CHLRE 09g388800v5
gene id: 3055:CHLRE_09g388800v5
uniprot id: Q7XXT3
names: Similarity
messages: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.

3055:CHLRE 02g088850v5
gene id: 3055:CHLRE_02g088850v5
uniprot id: A8I8Z1
names: Function
names: Similarity
messages: Belongs to the DMRL synthase family.
messages: Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.

3055:CHLRE 08g365400v5
gene id: 3055:CHLRE_08g365400v5
uniprot id: A8J3Z3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL31 family.

3055:CHLRE 05g244850v5
gene id: 3055:CHLRE_05g244850v5
uniprot id: A8I5E8
names: Similarity
messages: Belongs to the MOG1 family.

3055:CHLRE 10g449550v5
gene id: 3055:CHLRE_10g449550v5
uniprot id: A8HZQ4
names: Function
names: Similarity
messages: Belongs to the peroxiredoxin family. Prx5 subfamily.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

3055:CHLRE 03g206850v5
gene id: 3055:CHLRE_03g206850v5
uniprot id: A8IX72
names: Similarity
messages: Belongs to the GILT family.

3055:CHLRE 05g237000v5
gene id: 3055:CHLRE_05g237000v5
uniprot id: A8J8C1
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).

3055:CHLRE 06g271300v5
gene id: 3055:CHLRE_06g271300v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 07g329700v5
gene id: 3055:CHLRE_07g329700v5
uniprot id: A8IHB3
names: Similarity
messages: Belongs to the AAA ATPase family.

3055:CHLRE 13g584200v5
gene id: 3055:CHLRE_13g584200v5
uniprot id: A8HU96
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 16g673729v5
gene id: 3055:CHLRE_16g673729v5
uniprot id: A8J3C3
names: Similarity
messages: Belongs to the GroES chaperonin family.

3055:CHLRE 12g515550v5
gene id: 3055:CHLRE_12g515550v5
uniprot id: A8JHW6
names: Similarity
messages: Belongs to the STXBP/unc-18/SEC1 family.

3055:CHLRE 01g051250v5
gene id: 3055:CHLRE_01g051250v5
uniprot id: Q39584
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: Consists of at least 3 heavy chains (alpha, beta and gamma), 2 intermediate chains and 8 light chains.
messages: May be involved in the calcium-mediated regulation of dynein motor function. Binds 1 mole of calcium.
messages: flagellum

3055:CHLRE 13g574800v5
gene id: 3055:CHLRE_13g574800v5
uniprot id: A8HT22
names: Similarity
messages: Belongs to the cytochrome b5 family.

3055:CHLRE 16g693700v5
gene id: 3055:CHLRE_16g693700v5
uniprot id: A8JBJ3
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 07g323050v5
gene id: 3055:CHLRE_07g323050v5
uniprot id: A8I7D1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PEN-2 family.
messages: Membrane

3055:CHLRE 06g257550v5
gene id: 3055:CHLRE_06g257550v5
uniprot id: A8HXY9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 12g557800v5
gene id: 3055:CHLRE_12g557800v5
uniprot id: A8JGY0
names: Similarity
messages: Belongs to the PDCD5 family.

3055:CHLRE 08g378900v5
gene id: 3055:CHLRE_08g378900v5
uniprot id: Q6V502
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I subunit 3 family.
messages: Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Mitochondrion membrane

3055:CHLRE 16g664400v5
gene id: 3055:CHLRE_16g664400v5
uniprot id: A8JFA1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the profilin family.
messages: cytoskeleton

3055:CHLRE 06g278750v5
gene id: 3055:CHLRE_06g278750v5
uniprot id: A8J1X0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 12g532500v5
gene id: 3055:CHLRE_12g532500v5
uniprot id: A8IVU1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
messages: Membrane
messages: chloroplast envelope

3055:CHLRE 13g562475v5
gene id: 3055:CHLRE_13g562475v5
uniprot id: A8HR60
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERD2 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 08g366000v5
gene id: 3055:CHLRE_08g366000v5
uniprot id: A8J403
names: Similarity
messages: Belongs to the TMEM14 family.

3055:CHLRE 12g527800v5
gene id: 3055:CHLRE_12g527800v5
uniprot id: A8J5C4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dynein light chain family.
messages: cytoskeleton

3055:CHLRE 06g301050v5
gene id: 3055:CHLRE_06g301050v5
uniprot id: A8INQ0
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the small GTPase superfamily. Arf family.
messages: Cilium-specific protein required to control the microtubule-based, ciliary axoneme structure. May act by maintaining the association between IFT subcomplexes A and B (By similarity).
messages: Contains an incomplete active site due to the presence of a Gly residue in position 72 instead of a Gln, probably explaining the inability to hydrolyze GTP.
messages: Monomer.
messages: cilium membrane

3055:CHLRE 01g000250v5
gene id: 3055:CHLRE_01g000250v5
uniprot id: A8JD31
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 08g359700v5
gene id: 3055:CHLRE_08g359700v5
uniprot id: A8JGF7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the radical SAM superfamily. Lipoyl synthase family.
messages: Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.
messages: Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
messages: Mitochondrion

3055:CHLRE 04g220700v5
gene id: 3055:CHLRE_04g220700v5
uniprot id: A8ISU1
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. Aurora subfamily.

3055:CHLRE 06g298350v5
gene id: 3055:CHLRE_06g298350v5
uniprot id: A8IP37
names: Similarity
messages: Belongs to the BZW family.

3055:CHLRE 13g575950v5
gene id: 3055:CHLRE_13g575950v5
uniprot id: A8HT69
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat HIR1 family.
messages: Nucleus
messages: Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

3055:CHLRE 17g711850v5
gene id: 3055:CHLRE_17g711850v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 01g026600v5
gene id: 3055:CHLRE_01g026600v5
uniprot id: A8HQ77
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 03g207900v5
gene id: 3055:CHLRE_03g207900v5
uniprot id: A8IX31
names: Similarity
messages: Belongs to the cyclin family.

3055:CHLRE 17g715250v5
gene id: 3055:CHLRE_17g715250v5
uniprot id: A8JDA7
names: Function
names: Subcellular Location Annotation
messages: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
messages: chloroplast

3055:CHLRE 03g176833v5
gene id: 3055:CHLRE_03g176833v5
uniprot id: O24426
names: Similarity
messages: Belongs to the actin family.

3055:CHLRE 02g118300v5
gene id: 3055:CHLRE_02g118300v5
uniprot id: A8JGT1
names: Similarity
messages: Belongs to the DEAD box helicase family. DDX21/DDX50 subfamily.

3055:CHLRE 12g527300v5
gene id: 3055:CHLRE_12g527300v5
uniprot id: A8J5E0
names: Similarity
names: Subunit
messages: Belongs to the activator 1 small subunits family.
messages: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can form a complex with RFC1.

3055:CHLRE 07g339150v5
gene id: 3055:CHLRE_07g339150v5
uniprot id: A8ITH8
names: Similarity
messages: Belongs to the chaperonin (HSP60) family.

3055:CHLRE 14g624400v5
gene id: 3055:CHLRE_14g624400v5
uniprot id: A8IUG5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP99 family.
messages: flagellum

3055:CHLRE 01g042050v5
gene id: 3055:CHLRE_01g042050v5
uniprot id: V9P7H6
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the MsrB Met sulfoxide reductase family.
messages: Binds 1 zinc ion per subunit.
messages: Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.

3055:CHLRE 11g468550v5
gene id: 3055:CHLRE_11g468550v5
uniprot id: A8JC42
names: Function
names: Similarity
names: Subunit
messages: Belongs to the V-ATPase G subunit family.
messages: Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment.
messages: V-ATPase is a heteromultimeric enzyme made up of two complexes: the ATP-hydrolytic V1 complex and the proton translocation V0 complex.

3055:CHLRE 03g180350v5
gene id: 3055:CHLRE_03g180350v5
uniprot id: A8IDD8
names: Function
names: Similarity
messages: Belongs to the CKS family.
messages: Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.

3055:CHLRE 05g233900v5
gene id: 3055:CHLRE_05g233900v5
uniprot id: A8JG56
names: Similarity
messages: Belongs to the peroxidase family.

3055:CHLRE 03g146487v5
gene id: 3055:CHLRE_03g146487v5
uniprot id: A8J2W2
names: Similarity
messages: Belongs to the exportin family.

3055:CHLRE 17g714600v5
gene id: 3055:CHLRE_17g714600v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g505550v5
gene id: 3055:CHLRE_12g505550v5
uniprot id: Q42680
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 09g402500v5
gene id: 3055:CHLRE_09g402500v5
uniprot id: A8J1K0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the V-ATPase 116 kDa subunit family.
messages: Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
messages: Membrane

3055:CHLRE 07g348600v5
gene id: 3055:CHLRE_07g348600v5
uniprot id: A0A2K3DL42
uniprot id: Q8RVC7
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATP-binding cassette (ABC) (TC 3.A.1) superfamily.
messages: Membrane
messages: Part of the ABC-type chloroplast envelope-localized sulfate transporter. Required for primary uptake and assimilation of sulfate and chloroplast protein biosynthesis.
messages: Part of the chloroplast sulfate permease holocomplex. May form a heterodimer with SLUP2.
messages: Up-regulated by sulfate deprivation, but not by other environmental stresses.
messages: chloroplast membrane

3055:CHLRE 06g292500v5
gene id: 3055:CHLRE_06g292500v5
uniprot id: A8JFN4
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 03g205900v5
gene id: 3055:CHLRE_03g205900v5
uniprot id: Q5K1Y0
names: Cofactor
names: Similarity
messages: Belongs to the eukaryotic AdoMetDC family.
messages: Binds 1 pyruvoyl group covalently per subunit.

3055:CHLRE 16g664500v5
gene id: 3055:CHLRE_16g664500v5
uniprot id: A8JF99
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3055:CHLRE 06g253250v5
gene id: 3055:CHLRE_06g253250v5
uniprot id: A8HYE1
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 16g670200v5
gene id: 3055:CHLRE_16g670200v5
uniprot id: A8JB57
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CRIPT family.
messages: Cytoplasm

3055:CHLRE 16g666301v5
gene id: 3055:CHLRE_16g666301v5
uniprot id: A8JF66
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS30 family.

3055:CHLRE 02g077300v5
gene id: 3055:CHLRE_02g077300v5
uniprot id: A8IA86
names: Similarity
messages: Belongs to the methyltransferase superfamily. Fibrillarin family.

3055:CHLRE 09g417150v5
gene id: 3055:CHLRE_09g417150v5
uniprot id: A8J537
names: Function
names: Similarity
messages: Belongs to the catalase family.
messages: Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.

3055:CHLRE 12g542250v5
gene id: 3055:CHLRE_12g542250v5
uniprot id: A8IXZ0
uniprot id: P04690
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: The 2 beta-tubulin genes of Chlamydomonas (beta-1 and beta-2) encode the same protein.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: cytoskeleton

3055:CHLRE 07g322100v5
gene id: 3055:CHLRE_07g322100v5
uniprot id: A8I788
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SDE2 family.
messages: Nucleus

3055:CHLRE 02g076900v5
gene id: 3055:CHLRE_02g076900v5
uniprot id: Q695H0
names: Similarity
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. cGMP subfamily.

3055:CHLRE 12g485050v5
gene id: 3055:CHLRE_12g485050v5
uniprot id: Q6S7R9
names: Function
names: Similarity
messages: Belongs to the beta-class carbonic anhydrase family.
messages: Reversible hydration of carbon dioxide.

3055:CHLRE 01g042800v5
gene id: 3055:CHLRE_01g042800v5
uniprot id: A8HMQ3
names: Subcellular Location Annotation
messages: chloroplast

3055:CHLRE 12g498100v5
gene id: 3055:CHLRE_12g498100v5
uniprot id: A8JGK5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit E family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3055:CHLRE 11g467850v5
gene id: 3055:CHLRE_11g467850v5
uniprot id: A8JC23
names: Similarity
messages: Belongs to the taffazin family.

3055:CHLRE 03g172000v5
gene id: 3055:CHLRE_03g172000v5
uniprot id: Q84X75
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.
messages: Homotetramer.
messages: Plastid
messages: chloroplast

3055:CHLRE 10g431550v5
gene id: 3055:CHLRE_10g431550v5
uniprot id: A8IB95
names: Similarity
messages: Belongs to the zinc-containing alcohol dehydrogenase family.

3055:CHLRE 10g418100v5
gene id: 3055:CHLRE_10g418100v5
uniprot id: A8ID63
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Cytoplasm
messages: Nucleus
messages: The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.

3055:CHLRE 12g509650v5
gene id: 3055:CHLRE_12g509650v5
uniprot id: Q6J213
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the carotenoid/retinoid oxidoreductase family.
messages: Converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene with a concomitant isomerization of two neighboring double bonds at the C9 and C9' positions from trans to cis.
messages: Homotetramer.
messages: Membrane
messages: chloroplast
messages: chromoplast

3055:CHLRE 12g538750v5
gene id: 3055:CHLRE_12g538750v5
uniprot id: A8IVB1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the snRNP Sm proteins family.
messages: Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
messages: Component of the heptameric LSM1-LSM7 complex that forms a seven-membered ring structure with a donut shape.
messages: Cytoplasm
messages: P-body

3055:CHLRE 12g546400v5
gene id: 3055:CHLRE_12g546400v5
uniprot id: A8IY95
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.
messages: Belongs to the GAMAD family.
messages: cytoskeleton

3055:CHLRE 12g483950v5
gene id: 3055:CHLRE_12g483950v5
uniprot id: Q42686
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Homodimer.
messages: Mitochondrion matrix

3055:CHLRE 16g652550v5
gene id: 3055:CHLRE_16g652550v5
uniprot id: A8J9D9
names: Similarity
messages: Belongs to the universal ribosomal protein uL24 family.

3055:CHLRE 09g389689v5
gene id: 3055:CHLRE_09g389689v5
uniprot id: A8J173
names: Similarity
names: Subunit
messages: Belongs to the aspartate-semialdehyde dehydrogenase family.
messages: Homodimer.

3055:CHLRE 02g091050v5
gene id: 3055:CHLRE_02g091050v5
uniprot id: A8I980
names: Function
names: Similarity
names: Subunit
messages: Belongs to the ALAD family.
messages: Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.
messages: Homooctamer.

3055:CHLRE 03g188250v5
gene id: 3055:CHLRE_03g188250v5
uniprot id: Q9LLL6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
messages: Heterotetramer.
messages: This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
messages: chloroplast

3055:CHLRE 02g102000v5
gene id: 3055:CHLRE_02g102000v5
uniprot id: A8I4Q7
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3055:CHLRE 07g344950v5
gene id: 3055:CHLRE_07g344950v5
uniprot id: A8ITV3
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 04g222750v5
gene id: 3055:CHLRE_04g222750v5
uniprot id: O24451
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 12g495850v5
gene id: 3055:CHLRE_12g495850v5
uniprot id: A8JDL8
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3055:CHLRE 01g040450v5
gene id: 3055:CHLRE_01g040450v5
uniprot id: A8HMI1
names: Domain
names: Function
names: Subcellular Location Annotation
messages: Functions as two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction.
messages: Histidine-containing phosphotransfer domain (HPt) contains an active histidine that mediates the phosphotransfer.
messages: Nucleus
messages: cytosol

3055:CHLRE 14g617826v5
gene id: 3055:CHLRE_14g617826v5
uniprot id: Q6QAY4
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 16g680230v5
gene id: 3055:CHLRE_16g680230v5
uniprot id: A2PZD3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SecE/SEC61-gamma family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 11g467767v5
gene id: 3055:CHLRE_11g467767v5
uniprot id: Q6UP31
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
messages: Belongs to the complex I NDUFA12 subunit family.
messages: Mitochondrion inner membrane

3055:CHLRE 06g275750v5
gene id: 3055:CHLRE_06g275750v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 13g565550v5
gene id: 3055:CHLRE_13g565550v5
uniprot id: A8HRP7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA polymerase subunit family.
messages: Nucleus

3055:CHLRE 10g450350v5
gene id: 3055:CHLRE_10g450350v5
uniprot id: B8LIX8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IFT25 family.
messages: Component of the IFT complex B, the core composed of IFT25, IFT27, IFT46, IFT52, IFT74, IFT81 and IFT88 as well as associated subunits IFT20, IFT57, IFT80 and IFT172. Interacts with IFT27; the interaction is direct.
messages: Component of the intraflagellar transport (IFT) complex B. Forms a subcomplex within the IFT complex B with IFT27.
messages: Phosphorylated.
messages: Was initially classified as a member of the small heat shock family protein. However, it was later shown that it is not the case (PubMed:21505417).
messages: flagellum
messages: flagellum basal body

3055:CHLRE 03g183850v5
gene id: 3055:CHLRE_03g183850v5
uniprot id: Q2HZ21
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: chloroplast

3055:CHLRE 02g103550v5
gene id: 3055:CHLRE_02g103550v5
uniprot id: A8I4H4
names: Similarity
messages: Belongs to the eIF-1A family.

3055:CHLRE 12g515750v5
gene id: 3055:CHLRE_12g515750v5
uniprot id: A8JHW9
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 03g190950v5
gene id: 3055:CHLRE_03g190950v5
uniprot id: P09204
uniprot id: Q540H1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation of alpha chains at Lys-40 stabilizes microtubules and affects affinity and processivity of microtubule motors. This modification has a role in multiple cellular functions, ranging from cell motility, cell cycle progression or cell differentiation to intracellular trafficking and signaling (By similarity).
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively.
messages: cytoskeleton

3055:CHLRE 12g520350v5
gene id: 3055:CHLRE_12g520350v5
uniprot id: A8J5Z8
names: Similarity
messages: Belongs to the aldehyde dehydrogenase family.

3055:CHLRE 10g439850v5
gene id: 3055:CHLRE_10g439850v5
uniprot id: A8IIL1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Membrane

3055:CHLRE 16g654750v5
gene id: 3055:CHLRE_16g654750v5
uniprot id: A8J9A5
names: Similarity
messages: Belongs to the MMACHC family.

3055:CHLRE 12g522600v5
gene id: 3055:CHLRE_12g522600v5
uniprot id: A8J5T0
uniprot id: P15451
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c family.
messages: Binds 1 heme c group covalently per subunit.
messages: Binds 1 heme group per subunit.
messages: Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
messages: Mitochondrion intermembrane space

3055:CHLRE 02g142186v5
gene id: 3055:CHLRE_02g142186v5
uniprot id: A8JDK4
names: Similarity
messages: Belongs to the FtsZ family.

3055:CHLRE 06g271800v5
gene id: 3055:CHLRE_06g271800v5
uniprot id: A8HVV8
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SWEET sugar transporter family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mediates both low-affinity uptake and efflux of sugar across the membrane.
messages: Membrane

3055:CHLRE 10g423800v5
gene id: 3055:CHLRE_10g423800v5
uniprot id: A8ICD8
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 06g268000v5
gene id: 3055:CHLRE_06g268000v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 02g089100v5
gene id: 3055:CHLRE_02g089100v5
uniprot id: A8I901
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes medium subunit family. Delta-COP subfamily.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

3055:CHLRE 02g101350v5
gene id: 3055:CHLRE_02g101350v5
uniprot id: A8I4T2
names: Similarity
messages: Belongs to the universal ribosomal protein uL1 family.

3055:CHLRE 03g197750v5
gene id: 3055:CHLRE_03g197750v5
uniprot id: A8IWW7
names: Similarity
messages: Belongs to the glutathione peroxidase family.

3055:CHLRE 04g224800v5
gene id: 3055:CHLRE_04g224800v5
uniprot id: A8IT49
names: Similarity
messages: Belongs to the synaptobrevin family.

3055:CHLRE 12g528150v5
gene id: 3055:CHLRE_12g528150v5
uniprot id: A8J5B5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OSTC family.
messages: Membrane

3055:CHLRE 13g581550v5
gene id: 3055:CHLRE_13g581550v5
uniprot id: A8HTX4
names: Cofactor
names: Function
names: Similarity
messages: Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
messages: Belongs to the tRNA(His) guanylyltransferase family.
messages: Binds 2 magnesium ions per subunit.

3055:CHLRE 12g549300v5
gene id: 3055:CHLRE_12g549300v5
uniprot id: Q5VLJ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MIP/aquaporin (TC 1.A.8) family.
messages: Membrane

3055:CHLRE 13g585850v5
gene id: 3055:CHLRE_13g585850v5
uniprot id: A8HUH8
names: Similarity
messages: Belongs to the glycosyltransferase 28 family.

3055:CHLRE 06g251750v5
gene id: 3055:CHLRE_06g251750v5
uniprot id: A8HYL5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GINS3/PSF3 family.
messages: Nucleus

3055:CHLRE 03g145787v5
gene id: 3055:CHLRE_03g145787v5
uniprot id: A8J2Z3
names: Similarity
messages: Belongs to the small heat shock protein (HSP20) family.

3055:CHLRE 17g723600v5
gene id: 3055:CHLRE_17g723600v5
uniprot id: Q68RJ5
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IFT81 family.
messages: Component of the IFT complex B, the core composed of IFT25, IFT27, IFT46, IFT52, IFT74, IFT81 and IFT88 as well as associated subunits IFT20, IFT57, IFT80 and IFT172. Interacts with IFT81; the interaction is direct: within the IFT complex B, IFT74 and IFT81 mediate the transport of tubulin within the cilium. Interacts with tubulin; interaction is direct.
messages: Component of the intraflagellar transport (IFT) complex B: together with IFT74, forms a tubulin-binding module that specifically mediates transport of tubulin within the cilium. Binds tubulin via its CH (calponin-homology)-like region. Required for ciliogenesis.
messages: The CH (calponin-homology)-like region shows high similarity to a CH (calponin-homology) domain and mediated binding to the globular domain of tubulin.
messages: cilium

3055:CHLRE 06g270250v5
gene id: 3055:CHLRE_06g270250v5
uniprot id: A8HW43
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDC45 family.
messages: Nucleus

3055:CHLRE 16g683371v5
gene id: 3055:CHLRE_16g683371v5
uniprot id: A8JA94
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family.

3055:CHLRE 10g466000v5
gene id: 3055:CHLRE_10g466000v5
uniprot id: A8I1P7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SNUT3 family.
messages: May play a role in mRNA splicing.
messages: Nucleus
messages: Part of a tri-snRNP complex.

3055:CHLRE 12g516100v5
gene id: 3055:CHLRE_12g516100v5
uniprot id: A8JHX7
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 16g676150v5
gene id: 3055:CHLRE_16g676150v5
uniprot id: A8J3M8
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.

3055:CHLRE 02g144800v5
gene id: 3055:CHLRE_02g144800v5
uniprot id: A8J0U5
names: Similarity
messages: Belongs to the acetyltransferase family. ArgA subfamily.

3055:CHLRE 14g617500v5
gene id: 3055:CHLRE_14g617500v5
uniprot id: A8HNV0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the flagellar radial spoke RSP14 family.
messages: Cytoplasm
messages: cytoskeleton
messages: flagellum axoneme

3055:CHLRE 03g168450v5
gene id: 3055:CHLRE_03g168450v5
uniprot id: A8IF08
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TCP-1 chaperonin family.
messages: Cytoplasm

3055:CHLRE 03g201900v5
gene id: 3055:CHLRE_03g201900v5
uniprot id: Q27YU0
names: Function
names: PTM
names: Subcellular Location Annotation
messages: Asymmetrically dimethylated at Arg-243 and Arg-428 during flagellum resorption. Probably methylated by PRMT1.
messages: Flagellar radial spokes contribute to the regulation of dynein arm activity and thus the pattern of flagellar bending. They consist of a thin stalk, which is attached to the a subfiber of the outer doublet microtubule, and a bulbous head, which is attached to the stalk and appears to interact with the projections from the central pair of microtubules.
messages: flagellum axoneme

3055:CHLRE 17g708150v5
gene id: 3055:CHLRE_17g708150v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 03g178500v5
gene id: 3055:CHLRE_03g178500v5
uniprot id: Q9M6B0
names: Similarity
messages: Belongs to the RIB43A family.

3055:CHLRE 10g427150v5
gene id: 3055:CHLRE_10g427150v5
uniprot id: A8IC04
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ISY1 family.
messages: Nucleus

3055:CHLRE 13g591200v5
gene id: 3055:CHLRE_13g591200v5
uniprot id: A8IW84
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g278185v5
gene id: 3055:CHLRE_06g278185v5
uniprot id: A8J914
names: Similarity
messages: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.

3055:CHLRE 06g257450v5
gene id: 3055:CHLRE_06g257450v5
uniprot id: A8HXZ5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the V-ATPase proteolipid subunit family.
messages: Membrane
messages: Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex attached to an integral membrane V0 proton pore complex.
messages: Vacuole membrane

3055:CHLRE 03g167600v5
gene id: 3055:CHLRE_03g167600v5
uniprot id: A8IF44
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: As component of a spoke-associated complex, regulates flagellar dynein activity by mediating regulatory signals between the radial spokes and dynein arms.
messages: Identified in a spoke-associated complex containing CFAP61, CFAP91 and CFAP251; the complex is associated with the radial spokes in the axoneme (PubMed:17967944). The complex associates with Calmodulin; the association is calcium sensitive (PubMed:17967944).
messages: flagellum axoneme

3055:CHLRE 12g519180v5
gene id: 3055:CHLRE_12g519180v5
uniprot id: A8J637
names: Function
names: Induction
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: 65 kDa protein PSRP-7 is the major form.
messages: Associates transiently with chloroplast polysomes.
messages: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP (PubMed:15548736). It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (PubMed:15548736).
messages: Belongs to the EF-Ts family.
messages: Binds to psbD and psbA mRNAs 5'-untranslated regions (UTRs) in vitro.
messages: Component of the chloroplast ribosome 30S and 70S subunits, as well as polysomes.
messages: Component of the chloroplast ribosome 70S subunit, and at low levels, present in polysomes.
messages: Expressed constitutively in both continuous light, and 12 hours light/ 12 hours dark conditions (at protein level).
messages: Induced transiently upon shifting to light; mostly expressed after shifting to light, tand at low levels at the end of the light and dark periods and under continuous light.
messages: Induced transiently upon shifting to light; mostly expressed after shifting to light, to a lower extent at the end of the dark period and under continuous light, and at low levels at the end of the light period.
messages: Visible only at the end of the dark period, in 12 hours light/ 12 hours dark conditions (at protein level) (PubMed:15548736). Induced transiently upon shifting to light; mostly expressed after shifting to light, to a lower extent at the end of the dark period and under continuous light, and at low levels at the end of the light period (PubMed:15548736).
messages: chloroplast

3055:CHLRE 12g517350v5
gene id: 3055:CHLRE_12g517350v5
uniprot id: A8J6A2
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 10g424850v5
gene id: 3055:CHLRE_10g424850v5
uniprot id: A8IC90
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRP31 family.
messages: Nucleus

3055:CHLRE 07g332950v5
gene id: 3055:CHLRE_07g332950v5
uniprot id: Q39618
uniprot id: Q546J6
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SF-assemblin family.
messages: Consists of a small non-helical N-terminal domain and a rod domain with a 29 residue repeat pattern based on four heptads followed by a skip residue. This alpha-helical protein is characterized by the ability to form a special segmented coiled coil and to assemble into striated fibers of 2 nm protofilaments (By similarity).
messages: Major component of the striated microtubule-associated fibers (SMAFs; system-I-fibers).
messages: cytoskeleton

3055:CHLRE 16g685550v5
gene id: 3055:CHLRE_16g685550v5
uniprot id: A8ISA9
names: Similarity
messages: Belongs to the cysteine synthase/cystathionine beta-synthase family.

3055:CHLRE 12g525700v5
gene id: 3055:CHLRE_12g525700v5
uniprot id: A8J5J2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c-type heme lyase family.
messages: Lyase that catalyzes the covalent linking of the heme group to the cytochrome C apoprotein to produce the mature functional cytochrome.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 17g714650v5
gene id: 3055:CHLRE_17g714650v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 17g713550v5
gene id: 3055:CHLRE_17g713550v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 16g667750v5
gene id: 3055:CHLRE_16g667750v5
uniprot id: A8ISK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family.
messages: Nucleus

3055:CHLRE 11g467576v5
gene id: 3055:CHLRE_11g467576v5
uniprot id: A8JF07
names: Similarity
messages: Belongs to the SPIRAL1 family.

3055:CHLRE 04g216850v5
gene id: 3055:CHLRE_04g216850v5
uniprot id: P09204
uniprot id: Q540H1
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation of alpha chains at Lys-40 stabilizes microtubules and affects affinity and processivity of microtubule motors. This modification has a role in multiple cellular functions, ranging from cell motility, cell cycle progression or cell differentiation to intracellular trafficking and signaling (By similarity).
messages: Belongs to the tubulin family.
messages: Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
messages: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
messages: Undergoes a tyrosination/detyrosination cycle, the cyclic removal and re-addition of a C-terminal tyrosine residue by the enzymes tubulin tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL), respectively.
messages: cytoskeleton

3055:CHLRE 03g177500v5
gene id: 3055:CHLRE_03g177500v5
uniprot id: A8IDS5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DP1 family.
messages: Membrane

3055:CHLRE 12g538700v5
gene id: 3055:CHLRE_12g538700v5
uniprot id: A8IVB2
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 12g526750v5
gene id: 3055:CHLRE_12g526750v5
uniprot id: A8J5G1
names: Subcellular Location Annotation
messages: Cytoplasm

3055:CHLRE 10g421850v5
gene id: 3055:CHLRE_10g421850v5
uniprot id: A8ICM2
names: Similarity
messages: Belongs to the LSM12 family.

3055:CHLRE 12g514200v5
gene id: 3055:CHLRE_12g514200v5
uniprot id: A8JHB7
names: Activity Regulation
names: Biotechnology
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activated by blue light and repressed by red light.
messages: Belongs to the GMC oxidoreductase family.
messages: Binds 1 FAD per subunit.
messages: Catalyzes the decarboxylation of free fatty acids to n-alkanes or n-alkenes in response to blue light (PubMed:28860382, PubMed:30144559). Substrate preference is toward fatty acids with C17 or C18 chains (PubMed:28860382, PubMed:30144559). Saturated fatty acids are converted to alkanes, not alkenes (PubMed:28860382, PubMed:30144559). The decarboxylation is initiated through electron abstraction from the fatty acid by the photo-excited FAD (By similarity).
messages: May be used in light-driven, bio-based production of hydrocarbons.
messages: chloroplast

3055:CHLRE 06g251900v5
gene id: 3055:CHLRE_06g251900v5
uniprot id: A8HYK7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OXA1/ALB3/YidC (TC 2.A.9.2) family.
messages: Belongs to the OXA1/ALB3/YidC family.
messages: Membrane

3055:CHLRE 07g316000v5
gene id: 3055:CHLRE_07g316000v5
uniprot id: A8I6D1
names: Function
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Has a role in nuclear-cytoplasmic transport of proteins and mRNAs.
messages: Nucleus

3055:CHLRE 01g049000v5
gene id: 3055:CHLRE_01g049000v5
uniprot id: A8HN94
names: Similarity
messages: Belongs to the pterin-4-alpha-carbinolamine dehydratase family.

3055:CHLRE 10g464850v5
gene id: 3055:CHLRE_10g464850v5
uniprot id: A8I1K5
names: Similarity
messages: Belongs to the MsrA Met sulfoxide reductase family.

3055:CHLRE 09g392245v5
gene id: 3055:CHLRE_09g392245v5
uniprot id: A8J062
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DPM3 family.
messages: Component of the dolichol-phosphate mannose (DPM) synthase complex.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER.

3055:CHLRE 12g546650v5
gene id: 3055:CHLRE_12g546650v5
uniprot id: A8IYA3
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 12g520500v5
gene id: 3055:CHLRE_12g520500v5
uniprot id: A8J5Z0
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uL10 family.
messages: Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

3055:CHLRE 06g251500v5
gene id: 3055:CHLRE_06g251500v5
uniprot id: D5LAU0
names: Similarity
messages: Belongs to the spermidine/spermine synthase family.

3055:CHLRE 02g082250v5
gene id: 3055:CHLRE_02g082250v5
uniprot id: A8I826
names: Similarity
messages: Belongs to the GHMP kinase family. Homoserine kinase subfamily.

3055:CHLRE 06g306300v5
gene id: 3055:CHLRE_06g306300v5
uniprot id: A8IMZ5
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mg-chelatase subunits D/I family.
messages: Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
messages: Redox regulation; active in reducing conditions, inactive in oxidizing conditions.
messages: The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD, AND CHLH.
messages: chloroplast

3055:CHLRE 03g175400v5
gene id: 3055:CHLRE_03g175400v5
uniprot id: A8IE23
names: Similarity
messages: Belongs to the GPI family.

3055:CHLRE 17g709050v5
gene id: 3055:CHLRE_17g709050v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 17g704600v5
gene id: 3055:CHLRE_17g704600v5
uniprot id: A8IPT6
names: Similarity
messages: Belongs to the FUN14 family.

3055:CHLRE 03g196050v5
gene id: 3055:CHLRE_03g196050v5
uniprot id: A8IWR1
names: Subcellular Location Annotation
messages: cilium basal body

3055:CHLRE 17g705400v5
gene id: 3055:CHLRE_17g705400v5
uniprot id: A8IRE2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1A family.
messages: Cytoplasm
messages: Nucleus
messages: The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits.
messages: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.

3055:CHLRE 10g452050v5
gene id: 3055:CHLRE_10g452050v5
uniprot id: Q75VZ0
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 13g604650v5
gene id: 3055:CHLRE_13g604650v5
uniprot id: A8JAW4
names: Similarity
messages: Belongs to the peptidase M24 family.

3055:CHLRE 04g222700v5
gene id: 3055:CHLRE_04g222700v5
uniprot id: A8ISZ1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.
messages: Cytoplasm

3055:CHLRE 02g106150v5
gene id: 3055:CHLRE_02g106150v5
uniprot id: A8I427
names: Function
names: Similarity
messages: Belongs to the cyclophilin-type PPIase family.
messages: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.

3055:CHLRE 12g552200v5
gene id: 3055:CHLRE_12g552200v5
uniprot id: A8IYK1
names: Function
names: Similarity
messages: Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.
messages: Belongs to the glycogen phosphorylase family.

3055:CHLRE 16g688190v5
gene id: 3055:CHLRE_16g688190v5
uniprot id: A8JAH8
names: Subcellular Location Annotation
messages: Cytoplasm

3055:CHLRE 07g324600v5
gene id: 3055:CHLRE_07g324600v5
uniprot id: A8I7J8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adaptor complexes small subunit family.
messages: Cell membrane
messages: coated pit

3055:CHLRE 10g456050v5
gene id: 3055:CHLRE_10g456050v5
uniprot id: Q19VH4
names: Similarity
messages: Belongs to the WrbA family.

3055:CHLRE 09g403550v5
gene id: 3055:CHLRE_09g403550v5
uniprot id: A8J1L9
names: Similarity
messages: Belongs to the iron/ascorbate-dependent oxidoreductase family.

3055:CHLRE 06g272800v5
gene id: 3055:CHLRE_06g272800v5
uniprot id: A8HVQ1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS8 family.

3055:CHLRE 12g534800v5
gene id: 3055:CHLRE_12g534800v5
uniprot id: A8IVM9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GcvP family.
messages: Mitochondrion
messages: The glycine cleavage system catalyzes the degradation of glycine.
messages: The glycine cleavage system is composed of four proteins: P, T, L and H.

3055:CHLRE 16g689087v5
gene id: 3055:CHLRE_16g689087v5
uniprot id: A8JAH1
names: Caution
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3055:CHLRE 10g424450v5
gene id: 3055:CHLRE_10g424450v5
uniprot id: A8ICB0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Tom40 family.
messages: Membrane
messages: Mitochondrion outer membrane

3055:CHLRE 03g192000v5
gene id: 3055:CHLRE_03g192000v5
uniprot id: A8IWD6
names: Similarity
messages: Belongs to the WD repeat SEC13 family.

3055:CHLRE 16g685277v5
gene id: 3055:CHLRE_16g685277v5
uniprot id: A8JA80
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adaptor complexes medium subunit family.
messages: Cell membrane
messages: coated pit

3055:CHLRE 06g295450v5
gene id: 3055:CHLRE_06g295450v5
uniprot id: A8IPI7
names: Similarity
messages: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.

3055:CHLRE 12g556250v5
gene id: 3055:CHLRE_12g556250v5
uniprot id: A8IYS5
names: Similarity
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.

3055:CHLRE 06g273850v5
gene id: 3055:CHLRE_06g273850v5
uniprot id: A8HV98
uniprot id: P54347
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 02g092700v5
gene id: 3055:CHLRE_02g092700v5
uniprot id: A0A2K3E1C3
uniprot id: A8I9E8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP45 family.
messages: flagellum

3055:CHLRE 03g179500v5
gene id: 3055:CHLRE_03g179500v5
uniprot id: A8IDI8
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3055:CHLRE 12g495100v5
gene id: 3055:CHLRE_12g495100v5
uniprot id: Q9S807
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 03g183200v5
gene id: 3055:CHLRE_03g183200v5
uniprot id: Q6J4H1
names: Similarity
messages: Belongs to the adenylate kinase family.

3055:CHLRE 09g405400v5
gene id: 3055:CHLRE_09g405400v5
uniprot id: A8J814
names: Similarity
messages: Belongs to the prefoldin subunit beta family.

3055:CHLRE 12g549950v5
gene id: 3055:CHLRE_12g549950v5
uniprot id: A8IYH0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFT2 family.
messages: May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.
messages: Membrane

3055:CHLRE 02g116750v5
gene id: 3055:CHLRE_02g116750v5
uniprot id: Q96550
names: Function
names: Similarity
messages: Belongs to the ATPase alpha/beta chains family.
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane.

3055:CHLRE 06g284400v5
gene id: 3055:CHLRE_06g284400v5
uniprot id: A8J273
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HOP2 family.
messages: Nucleus

3055:CHLRE 05g240150v5
gene id: 3055:CHLRE_05g240150v5
uniprot id: A8J856
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 06g307200v5
gene id: 3055:CHLRE_06g307200v5
uniprot id: A8IMV0
names: Similarity
messages: Belongs to the endosulfine family.

3055:CHLRE 10g439150v5
gene id: 3055:CHLRE_10g439150v5
uniprot id: A8IIP7
names: Similarity
messages: Belongs to the AAA ATPase family.

3055:CHLRE 03g155650v5
gene id: 3055:CHLRE_03g155650v5
uniprot id: A8J7K1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the clathrin light chain family.
messages: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
messages: Cytoplasmic vesicle membrane
messages: coated pit

3055:CHLRE 17g747797v5
gene id: 3055:CHLRE_17g747797v5
uniprot id: A8JI17
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 03g182500v5
gene id: 3055:CHLRE_03g182500v5
uniprot id: A8JH66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SRP72 family.
messages: Cytoplasm

3055:CHLRE 12g558900v5
gene id: 3055:CHLRE_12g558900v5
uniprot id: Q9LLC6
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the petO family.
messages: Phosphorylated.
messages: The cytochrome b6-f complex functions in the linear cross-membrane transport of electrons between photosystem II and I, as well as in cyclic electron flow around photosystem I.
messages: chloroplast thylakoid membrane

3055:CHLRE 17g704550v5
gene id: 3055:CHLRE_17g704550v5
uniprot id: A8IPU0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the YIF1 family.
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 10g433250v5
gene id: 3055:CHLRE_10g433250v5
uniprot id: A8IB03
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Membrane

3055:CHLRE 02g080200v5
gene id: 3055:CHLRE_02g080200v5
uniprot id: A8IAN1
names: Similarity
names: Subunit
messages: Belongs to the transketolase family.
messages: Homodimer.

3055:CHLRE 12g558750v5
gene id: 3055:CHLRE_12g558750v5
uniprot id: A8JGW4
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

3055:CHLRE 06g278097v5
gene id: 3055:CHLRE_06g278097v5
uniprot id: A8J980
names: Similarity
messages: Belongs to the WD repeat rae1 family.

3055:CHLRE 16g674650v5
gene id: 3055:CHLRE_16g674650v5
uniprot id: A8J3J7
names: Similarity
messages: Belongs to the isochorismatase family.

3055:CHLRE 17g714500v5
gene id: 3055:CHLRE_17g714500v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g306350v5
gene id: 3055:CHLRE_06g306350v5
uniprot id: Q2HZ24
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: chloroplast

3055:CHLRE 02g097400v5
gene id: 3055:CHLRE_02g097400v5
uniprot id: A8I297
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the eIF-5A family.
messages: Part of the 50S ribosomal subunit.
messages: The precise role of eIF-5A in protein biosynthesis is not known but it functions by promoting the formation of the first peptide bond.
messages: eIF-5A seems to be the only eukaryotic protein to have a hypusine residue which is a post-translational modification of a lysine by the addition of a butylamino group.

3055:CHLRE 09g415950v5
gene id: 3055:CHLRE_09g415950v5
uniprot id: A8J503
names: Similarity
messages: Belongs to the universal ribosomal protein uL6 family.

3055:CHLRE 16g655200v5
gene id: 3055:CHLRE_16g655200v5
uniprot id: A8J994
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
messages: Membrane
messages: Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport.

3055:CHLRE 12g484050v5
gene id: 3055:CHLRE_12g484050v5
uniprot id: A8JHU2
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL36 family.

3055:CHLRE 10g435550v5
gene id: 3055:CHLRE_10g435550v5
uniprot id: A8IGJ8
names: Caution
names: Cofactor
names: Function
names: Similarity
messages: Belongs to the deoxyhypusine hydroxylase family.
messages: Binds 2 Fe(2+) ions per subunit.
messages: Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L-lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3055:CHLRE 12g490050v5
gene id: 3055:CHLRE_12g490050v5
uniprot id: A8ILL9
names: Subcellular Location Annotation
messages: Golgi apparatus membrane
messages: Membrane

3055:CHLRE 07g338000v5
gene id: 3055:CHLRE_07g338000v5
uniprot id: A8JCF0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MCM family.
messages: Nucleus

3055:CHLRE 16g689600v5
gene id: 3055:CHLRE_16g689600v5
uniprot id: M1V4Y8
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: As part of MIA, a complex associated with the outer doublet microtubules of the axoneme, may play a role in ciliary/flagellar motility by regulating the assembly and the activity of inner dynein arm.
messages: Belongs to the CFAP73 family.
messages: Interacts with FAP100; form the modifier of inner arm (MIA) complex.
messages: The mia2 mutants do not express the protein in the axoneme and display slightly jerky, slow swimming phenotypes, reduced flagellar beat frequencies and defective phototaxis.
messages: flagellum axoneme

3055:CHLRE 16g659300v5
gene id: 3055:CHLRE_16g659300v5
uniprot id: A8J8L2
names: Similarity
messages: Belongs to the cytochrome b5 family.

3055:CHLRE 16g675637v5
gene id: 3055:CHLRE_16g675637v5
uniprot id: A8J3A8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ubiquitin family. SUMO subfamily.
messages: Nucleus

3055:CHLRE 06g278194v5
gene id: 3055:CHLRE_06g278194v5
uniprot id: A8J907
names: Similarity
messages: Belongs to the FAM154 family.

3055:CHLRE 01g039200v5
gene id: 3055:CHLRE_01g039200v5
uniprot id: A8HME3
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Although similar to the small GTPase superfamily, lacks the conserved catalytic Gln in position 67 which is replaced by a Ser residue, possibly explaining the weak GTPase activity. In contrast to other members of the family, it is not prenylated (PubMed:22076686) and unlikely to associate directly with membranes.
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Component of the IFT complex B, composed of IFT88, IFT70, IFT52, IFT46, IFT27, IFT25 and IFT22.
messages: Component of the intraflagellar transport (IFT) complex B. Functions in regulating the cellular pool size of both complex A and complex B and thus plays a critical role in determining the cellular availability of IFT particles.
messages: flagellum

3055:CHLRE 01g029250v5
gene id: 3055:CHLRE_01g029250v5
uniprot id: A8HQD7
names: Similarity
messages: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family.

3055:CHLRE 02g085450v5
gene id: 3055:CHLRE_02g085450v5
uniprot id: Q9S7V1
names: Similarity
names: Subunit
messages: Belongs to the aerobic coproporphyrinogen-III oxidase family.
messages: Homodimer.

3055:CHLRE 10g445050v5
gene id: 3055:CHLRE_10g445050v5
uniprot id: A8IHV3
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the divalent anion:Na+ symporter (DASS) superfamily. Na+/sulfate symporter (TC 2.A.47.4) family.
messages: Cell membrane
messages: Down-regulated by sulfur deprivation.
messages: Na(+)/sulfate cotransporter with a probable low-affinity for sulfate.

3055:CHLRE 17g723550v5
gene id: 3055:CHLRE_17g723550v5
uniprot id: A8J6J4
names: Similarity
messages: Belongs to the inositol monophosphatase superfamily.

3055:CHLRE 10g443250v5
gene id: 3055:CHLRE_10g443250v5
uniprot id: A8II42
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TCP-1 chaperonin family.
messages: Cytoplasm

3055:CHLRE 11g467527v5
gene id: 3055:CHLRE_11g467527v5
uniprot id: A8JF53
names: Similarity
messages: Belongs to the cytochrome P450 family.

3055:CHLRE 06g267900v5
gene id: 3055:CHLRE_06g267900v5
uniprot id: A8HWG4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRA1 family.
messages: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
messages: Membrane

3055:CHLRE 12g510600v5
gene id: 3055:CHLRE_12g510600v5
uniprot id: A8IKP6
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 03g172550v5
gene id: 3055:CHLRE_03g172550v5
uniprot id: A8IEF3
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Arginine methyltransferase that methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in target proteins. Mediates asymmetric dimethylation of components of the axoneme during flagellum resorption, such as CCDC40/FAP172, CCDC65/FAP250, RSP1, RSP2, RPS5, RSP6, and tektin (PubMed:24152136).
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
messages: Nucleus
messages: Phosphorylated during flagellum resorption.
messages: flagellum

3055:CHLRE 09g402552v5
gene id: 3055:CHLRE_09g402552v5
uniprot id: Q84K56
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 07g335600v5
gene id: 3055:CHLRE_07g335600v5
uniprot id: Q6IYG4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FNT transporter (TC 2.A.44) family.
messages: Membrane

3055:CHLRE 17g709250v5
gene id: 3055:CHLRE_17g709250v5
uniprot id: A8IR66
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SFT2 family.
messages: May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.
messages: Membrane

3055:CHLRE 03g172300v5
gene id: 3055:CHLRE_03g172300v5
uniprot id: Q84X74
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 16g680000v5
gene id: 3055:CHLRE_16g680000v5
uniprot id: A8J3U9
names: Similarity
messages: Belongs to the ATPase delta chain family.

3055:CHLRE 12g522450v5
gene id: 3055:CHLRE_12g522450v5
uniprot id: A8J5T5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat SEC31 family.
messages: Endoplasmic reticulum membrane

3055:CHLRE 10g430200v5
gene id: 3055:CHLRE_10g430200v5
uniprot id: A8IBH3
names: PTM
names: Similarity
messages: Belongs to the sulfatase family.
messages: The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.

3055:CHLRE 08g371450v5
gene id: 3055:CHLRE_08g371450v5
uniprot id: A8JET7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adaptor complexes small subunit family.
messages: COPI-coated vesicle membrane
messages: Cytoplasm
messages: Golgi apparatus membrane
messages: Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits.
messages: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity). The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.

3055:CHLRE 11g468950v5
gene id: 3055:CHLRE_11g468950v5
uniprot id: A8JC51
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the UQCR10/QCR9 family.
messages: Component of the ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII), a multisubunit enzyme composed of 3 respiratory subunits cytochrome b, cytochrome c1 and Rieske protein, 2 core protein subunits, and additional low-molecular weight protein subunits.
messages: Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 07g330250v5
gene id: 3055:CHLRE_07g330250v5
uniprot id: A8IH77
uniprot id: P13352
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the psaH family.
messages: Membrane
messages: Possible role could be the docking of the LHC I antenna complex to the core complex.
messages: chloroplast thylakoid membrane

3055:CHLRE 14g615400v5
gene id: 3055:CHLRE_14g615400v5
uniprot id: A8JAR4
names: Cofactor
names: Similarity
messages: Belongs to the truncated hemoglobin family. Group I subfamily.
messages: Binds 1 heme group per subunit.

3055:CHLRE 12g509400v5
gene id: 3055:CHLRE_12g509400v5
uniprot id: A8IKH1
names: Similarity
messages: Belongs to the ribonucleoside diphosphate reductase small chain family.

3055:CHLRE 17g709350v5
gene id: 3055:CHLRE_17g709350v5
uniprot id: A8IR64
names: Similarity
messages: Belongs to the syntaxin family.

3055:CHLRE 08g367500v5
gene id: 3055:CHLRE_08g367500v5
uniprot id: P0DO18
uniprot id: P0DO19
names: Disruption Phenotype
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Impaired in non-photochemical quenching (NPQ) under high light conditions.
messages: Induced by sulfur deprivation (PubMed:15470261). Induced by high light stress (at protein level) (PubMed:19940928, PubMed:21267060, PubMed:24850838, PubMed:27358399, PubMed:27693674).
messages: Interacts with the photosystem II-light-harvesting complex II (PSII-LHCII) supercomplex to form PSII-LHCII-LHCSR3 supercomplex.
messages: Required for non-photochemical quenching (NPQ), a mechanism that converts and dissipates the harmful excess absorbed light energy into heat and protect the photosynthetic apparatus from photo-oxidative damage (PubMed:19940928, PubMed:21267060, PubMed:23716695, PubMed:26817847, PubMed:27626383, PubMed:27693674, PubMed:28233792, PubMed:31042040, PubMed:30782831). NPQ includes dissipating excess light energy to heat (qE) and the reversible coupling of LHCII to photosystems (state transitions or qT), which are considered separate NPQ mechanisms (PubMed:28233792). Is responsible for most of the excess light energy to heat dissipation (qE), also known as energy-dependent chlorophyll fluorescence quenching activity of chlorophyll excited states (PubMed:21267060, PubMed:28233792). Involved in a de-coupling and re-coupling of energy transfer to photosystem II (PSII) during qT (PubMed:28233792). Binds chlorophyll a and b (PubMed:21267060, PubMed:27150505). Is able to sense luminal acidification of the thylakoid membranes, which occurs along with elevated electron flow caused by excess light (PubMed:21267060, PubMed:26817847, PubMed:31042040). Establishes interactions with photosystem II (PSII) antenna components upon lumen acidification, and protonation of lumen-exposed, negatively charged residues both in LHCSR3 and in PSII antenna components (PubMed:26817847). Mediates excitation energy transfer from light-harvesting complex II (LHCII) to photosystem I (PSI), rather than photosystem II (PSII), at low pH, which mimics the acidified lumen of the thylakoid membranes in high light-exposed chloroplasts (PubMed:30782831). Activates PSI-dependent fluorescence quenching in addition to dissipating excitation energy in LHCII to avoid photooxidative stress under excess light (PubMed:30782831). Contributes with PGRL1 to the regulation of electron flow upstream of photosystem I (PSI), and limits the accumulation of electrons on the PSI acceptor side, thus avoiding PSI photoinhibition (P…
messages: chloroplast thylakoid membrane

3055:CHLRE 06g275800v5
gene id: 3055:CHLRE_06g275800v5
uniprot id: A8HV98
uniprot id: P54347
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 09g410750v5
gene id: 3055:CHLRE_09g410750v5
uniprot id: A8J4P1
names: Similarity
messages: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.

3055:CHLRE 12g504750v5
gene id: 3055:CHLRE_12g504750v5
uniprot id: Q42680
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 08g362550v5
gene id: 3055:CHLRE_08g362550v5
uniprot id: A8J4D6
names: Similarity
messages: Belongs to the VPS37 family.

3055:CHLRE 03g195350v5
gene id: 3055:CHLRE_03g195350v5
uniprot id: A8IWN9
names: Similarity
messages: Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.

3055:CHLRE 12g514750v5
gene id: 3055:CHLRE_12g514750v5
uniprot id: A8JHC9
names: Similarity
messages: Belongs to the citrate synthase family.

3055:CHLRE 03g190100v5
gene id: 3055:CHLRE_03g190100v5
uniprot id: A8IRV6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit B family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm
messages: RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

3055:CHLRE 17g713500v5
gene id: 3055:CHLRE_17g713500v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g282800v5
gene id: 3055:CHLRE_06g282800v5
uniprot id: A8J244
names: Cofactor
names: Function
names: Subcellular Location Annotation
messages: Can also use Mn(2+) ion.
messages: Glyoxysome
messages: Involved in storage lipid mobilization during the growth of higher plant seedling.

3055:CHLRE 10g438750v5
gene id: 3055:CHLRE_10g438750v5
uniprot id: A8IIR9
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane
messages: Membrane

3055:CHLRE 02g103100v5
gene id: 3055:CHLRE_02g103100v5
uniprot id: A8I4J6
names: Similarity
messages: Belongs to the short-chain dehydrogenases/reductases (SDR) family.

3055:CHLRE 08g368050v5
gene id: 3055:CHLRE_08g368050v5
uniprot id: A8J441
names: Similarity
messages: Belongs to the MGMT family.

3055:CHLRE 09g394065v5
gene id: 3055:CHLRE_09g394065v5
uniprot id: A8J0A0
names: Similarity
messages: Belongs to the SPIRAL1 family.

3055:CHLRE 07g354200v5
gene id: 3055:CHLRE_07g354200v5
uniprot id: A8JFT3
names: Similarity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.

3055:CHLRE 16g673650v5
gene id: 3055:CHLRE_16g673650v5
uniprot id: Q9FEK6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 16g683950v5
gene id: 3055:CHLRE_16g683950v5
uniprot id: A8IS72
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3055:CHLRE 03g161050v5
gene id: 3055:CHLRE_03g161050v5
uniprot id: A8J7C1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the GINS1/PSF1 family.
messages: Nucleus

3055:CHLRE 10g438550v5
gene id: 3055:CHLRE_10g438550v5
uniprot id: A8IIS8
names: Function
messages: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.

3055:CHLRE 10g466750v5
gene id: 3055:CHLRE_10g466750v5
uniprot id: Q8LPN9
names: Similarity
messages: Belongs to the transferase hexapeptide repeat family.

3055:CHLRE 17g700100v5
gene id: 3055:CHLRE_17g700100v5
uniprot id: A8IQJ2
names: Similarity
messages: Belongs to the MIF family.

3055:CHLRE 01g018000v5
gene id: 3055:CHLRE_01g018000v5
uniprot id: A8HPP5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: nucleolus

3055:CHLRE 04g229300v5
gene id: 3055:CHLRE_04g229300v5
uniprot id: Q6SA05
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure.
messages: Belongs to the RuBisCO activase family.
messages: chloroplast stroma

3055:CHLRE 04g215000v5
gene id: 3055:CHLRE_04g215000v5
uniprot id: Q4VKB4
names: Function
messages: Involved in the biosynthesis of ketocarotenoids which are powerful anti-oxidative molecules (PubMed:21398427, PubMed:22526507). Catalyzes the conversion of zeaxanthin to astaxanthin via adonixanthin (PubMed:21398427, PubMed:22526507). Catalyzes the conversion of beta-carotene to canthaxanthin via echinenone (PubMed:21398427, PubMed:22526507).

3055:CHLRE 14g611850v5
gene id: 3055:CHLRE_14g611850v5
uniprot id: A8JAK4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
messages: Endosome membrane
messages: Golgi apparatus membrane
messages: Membrane

3055:CHLRE 05g247050v5
gene id: 3055:CHLRE_05g247050v5
uniprot id: Q0ZB34
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.
messages: Membrane

3055:CHLRE 01g051400v5
gene id: 3055:CHLRE_01g051400v5
uniprot id: A8HNG4
names: Caution
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERD2 family.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3055:CHLRE 03g167000v5
gene id: 3055:CHLRE_03g167000v5
uniprot id: A8IF78
names: Similarity
messages: Belongs to the ubiquitin-conjugating enzyme family.

3055:CHLRE 02g118600v5
gene id: 3055:CHLRE_02g118600v5
uniprot id: A8JGS6
names: Similarity
messages: Belongs to the FtsZ family.

3055:CHLRE 02g112250v5
gene id: 3055:CHLRE_02g112250v5
uniprot id: A8I338
names: Similarity
messages: Belongs to the peptidase C2 family.

3055:CHLRE 12g486300v5
gene id: 3055:CHLRE_12g486300v5
uniprot id: A8IL32
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PsaL family.
messages: Membrane

3055:CHLRE 01g014350v5
gene id: 3055:CHLRE_01g014350v5
uniprot id: A8HPG8
names: Function
names: Similarity
messages: Belongs to the peroxiredoxin family. Prx5 subfamily.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.

3055:CHLRE 12g494800v5
gene id: 3055:CHLRE_12g494800v5
uniprot id: Q39604
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inner dynein arm light chain family.
messages: Plays a dynamic role in flagellar motility. May be necessary for stable assembly of a subset of inner dynein arms or for the binding of these arms to the outer doublet microtubules of the axoneme.
messages: flagellum axoneme

3055:CHLRE 10g441950v5
gene id: 3055:CHLRE_10g441950v5
uniprot id: A8IIA2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP Sm proteins family.
messages: Component of LSM protein complexes, which are involved in RNA processing.
messages: Nucleus

3055:CHLRE 12g536100v5
gene id: 3055:CHLRE_12g536100v5
uniprot id: A0A2K3D565
uniprot id: A8IVJ1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Flattop family.
messages: May act as a regulator of cilium basal body docking and positioning in mono- and multiciliated cells.
messages: flagellum

3055:CHLRE 12g493250v5
gene id: 3055:CHLRE_12g493250v5
uniprot id: A8JDQ7
names: Similarity
messages: Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. cGMP subfamily.

3055:CHLRE 02g142850v5
gene id: 3055:CHLRE_02g142850v5
uniprot id: A8J0Q9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the snRNP Sm proteins family.
messages: LSm subunits form a heteromer with a doughnut shape.
messages: Nucleus
messages: Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.

3055:CHLRE 02g144650v5
gene id: 3055:CHLRE_02g144650v5
uniprot id: A8J0U1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
messages: Membrane
messages: Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport.

3055:CHLRE 10g423550v5
gene id: 3055:CHLRE_10g423550v5
uniprot id: A8ICF1
names: Similarity
messages: Belongs to the threonine aldolase family.

3055:CHLRE 08g380250v5
gene id: 3055:CHLRE_08g380250v5
uniprot id: A6Q0K5
names: Function
names: Miscellaneous
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues.
messages: Belongs to the CP12 family.
messages: Binds copper and nickel ions. Copper ions catalyze the oxidation of reduced thiol groups and thus promote formation of the disulfide bonds required for linker activity (PubMed:16259044).
messages: Contains two disulfide bonds; only the oxidized protein, with two disulfide bonds, is active in complex formation.
messages: Monomer (By similarity). Component of a complex that contains two dimers of PRK, two tetramers of GAPDH and CP12. CP12 associates with GAPDH, causing its conformation to change. This GAPDH/CP12 complex binds PRK to form a half-complex (one unit). This unit probably dimerizes due partially to interactions between the enzymes of each unit.
messages: chloroplast

3055:CHLRE 09g393150v5
gene id: 3055:CHLRE_09g393150v5
uniprot id: Q8LL91
names: Similarity
messages: Belongs to the multicopper oxidase family.

3055:CHLRE 09g407950v5
gene id: 3055:CHLRE_09g407950v5
uniprot id: A8J7U2
names: Similarity
messages: Belongs to the GILT family.

3055:CHLRE 02g099150v5
gene id: 3055:CHLRE_02g099150v5
uniprot id: A8I1Y7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SNAP family.
messages: Membrane
messages: Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.

3055:CHLRE 02g141350v5
gene id: 3055:CHLRE_02g141350v5
uniprot id: A8J0N6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DRC10 family.
messages: Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:23427265, PubMed:25411337).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of at least DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:23427265, PubMed:25411337).
messages: flagellum axoneme

3055:CHLRE 12g515200v5
gene id: 3055:CHLRE_12g515200v5
uniprot id: A8JHD7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DRC6 family.
messages: Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:23427265, PubMed:25411337).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of at least DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:23427265, PubMed:25411337).
messages: flagellum axoneme

3055:CHLRE 17g720950v5
gene id: 3055:CHLRE_17g720950v5
uniprot id: A8J6E6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the steroid 5-alpha reductase family. Polyprenol reductase subfamily.
messages: Endoplasmic reticulum membrane
messages: Membrane
messages: Plays a key role in early steps of protein N-linked glycosylation by being required for the conversion of polyprenol into dolichol. Dolichols are required for the synthesis of dolichol-linked monosaccharides and the oligosaccharide precursor used for N-glycosylation. Acts as a polyprenol reductase that promotes the reduction of the alpha-isoprene unit of polyprenols into dolichols in a NADP-dependent mechanism.

3055:CHLRE 01g021050v5
gene id: 3055:CHLRE_01g021050v5
uniprot id: A8HPV7
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 10g451900v5
gene id: 3055:CHLRE_10g451900v5
uniprot id: A8HZZ1
names: Similarity
messages: Belongs to the threonine synthase family.

3055:CHLRE 09g389430v5
gene id: 3055:CHLRE_09g389430v5
uniprot id: A8J168
names: Similarity
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily.

3055:CHLRE 16g679669v5
gene id: 3055:CHLRE_16g679669v5
uniprot id: A8JAC5
names: Similarity
messages: Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.

3055:CHLRE 11g467700v5
gene id: 3055:CHLRE_11g467700v5
uniprot id: A8JC21
names: Function
names: Similarity
names: Subunit
messages: Belongs to the uroporphyrinogen decarboxylase family.
messages: Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
messages: Homodimer.

3055:CHLRE 06g251200v5
gene id: 3055:CHLRE_06g251200v5
uniprot id: A8HYP5
names: Function
names: Subunit
messages: As a component of IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis. Involved in retrograde ciliary transport along microtubules from the ciliary tip to the base.
messages: Component of the IFT complex A (IFT-A) complex.

3055:CHLRE 13g567450v5
gene id: 3055:CHLRE_13g567450v5
uniprot id: A8HRZ0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the histone H1/H5 family.
messages: Nucleus

3055:CHLRE 06g279400v5
gene id: 3055:CHLRE_06g279400v5
uniprot id: A8J1Y2
names: Similarity
messages: Belongs to the peptidase S10 family.

3055:CHLRE 07g342200v5
gene id: 3055:CHLRE_07g342200v5
uniprot id: A8ITN7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TTC30/dfy-1/fleer family.
messages: cilium

3055:CHLRE 01g029150v5
gene id: 3055:CHLRE_01g029150v5
uniprot id: Q09JZ4
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Absence of outer row dynein and a reduced flagellar beat. Axonemal outer row dynein assembly is prevented by blocking association of heavy chains and intermediate chains in the cytoplasm.
messages: Belongs to the DNAAF1 family.
messages: Cilium-specific protein required for cilia structures. Axonemal dynein-associated protein that participates in a structural link between inner and outer row dyneins.
messages: Interacts with both outer row and I1 inner row dyneins.
messages: cilium axoneme

3055:CHLRE 08g385350v5
gene id: 3055:CHLRE_08g385350v5
uniprot id: A8IYY8
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 03g149650v5
gene id: 3055:CHLRE_03g149650v5
uniprot id: A8J2Q9
names: Similarity
messages: Belongs to the carotenoid oxygenase family.

3055:CHLRE 05g234550v5
gene id: 3055:CHLRE_05g234550v5
uniprot id: A0A2K3DSL2
uniprot id: Q42690
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I fructose-bisphosphate aldolase family.
messages: chloroplast

3055:CHLRE 16g673841v5
gene id: 3055:CHLRE_16g673841v5
uniprot id: A8J3C2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SPRING family.
messages: Membrane

3055:CHLRE 17g732000v5
gene id: 3055:CHLRE_17g732000v5
uniprot id: A8JFE2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Membrane

3055:CHLRE 11g467689v5
gene id: 3055:CHLRE_11g467689v5
uniprot id: A8J9Y1
uniprot id: P49728
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Rieske iron-sulfur protein family.
messages: Binds 1 [2Fe-2S] cluster per subunit.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, petD), cytochrome f and the Rieske protein, while the 4 small subunits are petG, petL, petM and petN. The complex functions as a dimer.
messages: The Rieske iron-sulfur protein is a high potential 2Fe-2S protein.
messages: This protein is 1 of 2 subunits of the cytochrome b6-f complex that are encoded in the nucleus.
messages: chloroplast thylakoid membrane

3055:CHLRE 01g055408v5
gene id: 3055:CHLRE_01g055408v5
uniprot id: A8JCQ8
names: Similarity
messages: Belongs to the ATP-dependent AMP-binding enzyme family.

3055:CHLRE 10g420750v5
gene id: 3055:CHLRE_10g420750v5
uniprot id: A8ICT1
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL30 family.

3055:CHLRE 09g387875v5
gene id: 3055:CHLRE_09g387875v5
uniprot id: A8J133
uniprot id: Q949J1
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PPase family.
messages: Mitochondrion
messages: Monomer.
messages: The N-terminus is blocked.

3055:CHLRE 16g658400v5
gene id: 3055:CHLRE_16g658400v5
uniprot id: Q2HZ25
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the 2Fe2S plant-type ferredoxin family.
messages: Binds 1 [2Fe-2S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
messages: chloroplast

3055:CHLRE 12g539000v5
gene id: 3055:CHLRE_12g539000v5
uniprot id: Q84JV7
names: Similarity
messages: Belongs to the cytidylyltransferase family.

3055:CHLRE 01g009950v5
gene id: 3055:CHLRE_01g009950v5
uniprot id: A8JCZ5
names: Similarity
messages: Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase NEP1 family.

3055:CHLRE 06g254800v5
gene id: 3055:CHLRE_06g254800v5
uniprot id: A8HY93
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SF3B4 family.
messages: Nucleus

3055:CHLRE 07g337150v5
gene id: 3055:CHLRE_07g337150v5
uniprot id: A8JCG5
names: Similarity
names: Subunit
messages: Belongs to the activator 1 small subunits family.
messages: Heterotetramer of subunits RFC2, RFC3, RFC4 and RFC5 that can form a complex with RFC1.

3055:CHLRE 07g320750v5
gene id: 3055:CHLRE_07g320750v5
uniprot id: Q5YLC2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
messages: Cytoplasm

3055:CHLRE 03g194850v5
gene id: 3055:CHLRE_03g194850v5
uniprot id: P93106
names: Similarity
names: Subunit
messages: Belongs to the LDH/MDH superfamily. MDH type 1 family.
messages: Homodimer.

3055:CHLRE 09g410600v5
gene id: 3055:CHLRE_09g410600v5
uniprot id: A8J4N7
names: Similarity
messages: Belongs to the PP2C family.

3055:CHLRE 12g535950v5
gene id: 3055:CHLRE_12g535950v5
uniprot id: A8IVJ7
names: Similarity
messages: Belongs to the complex I 75 kDa subunit family.

3055:CHLRE 10g456750v5
gene id: 3055:CHLRE_10g456750v5
uniprot id: A8I0K9
names: Similarity
messages: Belongs to the GST superfamily. DHAR family.

3055:CHLRE 02g143050v5
gene id: 3055:CHLRE_02g143050v5
uniprot id: A8J0R4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein P1/P2 family.
messages: P1 and P2 exist as dimers at the large ribosomal subunit.
messages: Plays an important role in the elongation step of protein synthesis.

3055:CHLRE 12g498900v5
gene id: 3055:CHLRE_12g498900v5
uniprot id: A8JGI9
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS7 family.

3055:CHLRE 01g037700v5
gene id: 3055:CHLRE_01g037700v5
uniprot id: I2CYZ4
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the fatty acid desaturase type 1 family.
messages: Fatty acid desaturase that introduces a cis double bond at the 4-position in 16-carbon polyunsaturated fatty acids that contain a Delta(7) double bond, resulting in the production of 16 carbon fatty acid (7Z,10Z,13Z)-hexadeca-7,10,13-trienoate.
messages: The cytochrome b5 heme-binding domain acts as the direct electron donor to the active site of the desaturase, and does not require an external cytochrome.
messages: chloroplast membrane

3055:CHLRE 13g605150v5
gene id: 3055:CHLRE_13g605150v5
uniprot id: A8JAX1
names: Function
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

3055:CHLRE 06g270150v5
gene id: 3055:CHLRE_06g270150v5
uniprot id: A8HW48
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 06g284650v5
gene id: 3055:CHLRE_06g284650v5
uniprot id: A8J277
names: Similarity
messages: Belongs to the protein-tyrosine phosphatase family.

3055:CHLRE 17g720050v5
gene id: 3055:CHLRE_17g720050v5
uniprot id: A8J6C7
names: Similarity
messages: Belongs to the AAA ATPase family.
messages: In the C-terminal section; belongs to the peptidase M41 family.
messages: In the N-terminal section; belongs to the AAA ATPase family.

3055:CHLRE 12g493950v5
gene id: 3055:CHLRE_12g493950v5
uniprot id: A8JDP6
names: Similarity
messages: Belongs to the universal ribosomal protein uS13 family.

3055:CHLRE 06g310700v5
gene id: 3055:CHLRE_06g310700v5
uniprot id: A8IM74
uniprot id: P49213
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL42 family.

3055:CHLRE 14g624350v5
gene id: 3055:CHLRE_14g624350v5
uniprot id: Q6WEE4
names: Similarity
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.

3055:CHLRE 02g104900v5
gene id: 3055:CHLRE_02g104900v5
uniprot id: A8I495
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.
messages: Cytoplasm
messages: Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
messages: Monomer.

3055:CHLRE 07g325762v5
gene id: 3055:CHLRE_07g325762v5
uniprot id: A8IHT2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AAA ATPase family. DRC11 subfamily.
messages: Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:25411337, PubMed:23427265).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of at least DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:25411337, PubMed:23427265). Interacts with DRC5 (PubMed:23427265).
messages: flagellum axoneme

3055:CHLRE 02g108050v5
gene id: 3055:CHLRE_02g108050v5
uniprot id: A8I3S5
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BCAP29/BCAP31 family.
messages: Endoplasmic reticulum membrane
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi.

3055:CHLRE 03g151750v5
gene id: 3055:CHLRE_03g151750v5
uniprot id: A8J2L7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP Sm proteins family. SmF/LSm6 subfamily.
messages: Nucleus

3055:CHLRE 03g145687v5
gene id: 3055:CHLRE_03g145687v5
uniprot id: A0A2K3DVC2
uniprot id: A8J2Z9
names: Caution
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the XPG/RAD2 endonuclease family. FEN1 subfamily.
messages: Binds 2 magnesium ions per subunit. They probably participate in the reaction catalyzed by the enzyme. May bind an additional third magnesium ion after substrate binding.
messages: Interacts with PCNA. Three molecules of FEN1 bind to one PCNA trimer with each molecule binding to one PCNA monomer. PCNA stimulates the nuclease activity without altering cleavage specificity.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Mitochondrion
messages: Phosphorylated. Phosphorylation upon DNA damage induces relocalization to the nuclear plasma.
messages: Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structures that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.
messages: nucleolus
messages: nucleoplasm

3055:CHLRE 06g253300v5
gene id: 3055:CHLRE_06g253300v5
uniprot id: A8HYD8
names: Similarity
messages: Belongs to the peptidase C12 family.

3055:CHLRE 12g542000v5
gene id: 3055:CHLRE_12g542000v5
uniprot id: A8IXY0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the DTD family.
messages: Cytoplasm

3055:CHLRE 12g555250v5
gene id: 3055:CHLRE_12g555250v5
uniprot id: Q6UKY9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I LYR family.
messages: Mitochondrion inner membrane

3055:CHLRE 06g278600v5
gene id: 3055:CHLRE_06g278600v5
uniprot id: A8J1W7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mediator complex subunit 21 family.
messages: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
messages: Component of the Mediator complex.
messages: Nucleus

3055:CHLRE 09g391208v5
gene id: 3055:CHLRE_09g391208v5
uniprot id: A8J1A6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bTHX family.

3055:CHLRE 02g100000v5
gene id: 3055:CHLRE_02g100000v5
uniprot id: A8I4Y6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the replication factor A protein 2 family.
messages: Nucleus

3055:CHLRE 12g489153v5
gene id: 3055:CHLRE_12g489153v5
uniprot id: P45841
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL31 family.

3055:CHLRE 12g515150v5
gene id: 3055:CHLRE_12g515150v5
uniprot id: A8JHD6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the MICOS complex subunit Mic10 family.
messages: Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 03g204350v5
gene id: 3055:CHLRE_03g204350v5
uniprot id: A8IXD6
names: Similarity
messages: Belongs to the peptidase S14 family.

3055:CHLRE 09g410700v5
gene id: 3055:CHLRE_09g410700v5
uniprot id: Q9FNS5
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the LDH/MDH superfamily. MDH type 2 family.
messages: Homodimer.
messages: chloroplast

3055:CHLRE 07g332450v5
gene id: 3055:CHLRE_07g332450v5
uniprot id: A8IGU4
names: Function
names: Similarity
messages: Belongs to the NMT1/THI5 family.
messages: Responsible for the formation of the pyrimidine heterocycle in the thiamine biosynthesis pathway. Catalyzes the formation of hydroxymethylpyrimidine phosphate (HMP-P) from histidine and pyridoxal phosphate (PLP). The protein uses PLP and the active site histidine to form HMP-P, generating an inactive enzyme. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme.

3055:CHLRE 12g559250v5
gene id: 3055:CHLRE_12g559250v5
uniprot id: A8JGV6
uniprot id: P52908
names: Similarity
messages: Belongs to the 14-3-3 family.

3055:CHLRE 06g250200v5
gene id: 3055:CHLRE_06g250200v5
uniprot id: A0A2K3DLX7
uniprot id: A8HYU5
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the AdoMet synthase family.
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate (By similarity).
messages: Binds 1 potassium ion per subunit. The potassium ion interacts primarily with the substrate.
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate (By similarity). Can utilize magnesium, manganese or cobalt (in vitro) (By similarity).
messages: Binds 2 divalent ions per subunit. The metal ions interact primarily with the substrate. Can utilize magnesium, manganese or cobalt (in vitro).
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
messages: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.
messages: Cytoplasm
messages: Homotetramer.

3055:CHLRE 10g437500v5
gene id: 3055:CHLRE_10g437500v5
uniprot id: A8IG88
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Tom7 family.
messages: Membrane
messages: Mitochondrion outer membrane

3055:CHLRE 06g266700v5
gene id: 3055:CHLRE_06g266700v5
uniprot id: A8HWM8
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g485150v5
gene id: 3055:CHLRE_12g485150v5
uniprot id: A8JHR9
names: Similarity
messages: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.

3055:CHLRE 08g370300v5
gene id: 3055:CHLRE_08g370300v5
uniprot id: A8JER6
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ENY2 family.
messages: Component of the nuclear pore complex (NPC)-associated TREX-2 complex (transcription and export complex 2). Component of the SAGA transcription coactivator-HAT complex. Within the SAGA complex, participates to a subcomplex of SAGA called the DUB module (deubiquitination module).
messages: Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery.
messages: nucleoplasm

3055:CHLRE 04g225850v5
gene id: 3055:CHLRE_04g225850v5
uniprot id: A8IT73
names: Similarity
messages: Belongs to the synaptobrevin family.

3055:CHLRE 15g635400v5
gene id: 3055:CHLRE_15g635400v5
uniprot id: Q8GSP8
names: Developmental Stage
names: Function
names: Subcellular Location Annotation
messages: Endoplasmic reticulum lumen
messages: Isoform 1 and isoform 2 are expressed 2-22 hours after zygote formation with highest level at 6 hours. Isoform 2 is expressed at low level.
messages: May have a role in the remodeling of the endoplasmic reticulum upon zygote formation.

3055:CHLRE 12g493150v5
gene id: 3055:CHLRE_12g493150v5
uniprot id: A8JDQ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the VKOR family.
messages: Membrane

3055:CHLRE 06g253753v5
gene id: 3055:CHLRE_06g253753v5
uniprot id: A8HYD2
uniprot id: Q94EY2
names: Function
names: Similarity
messages: Belongs to the UFM1 family.
messages: Ubiquitin-like modifier protein which binds to a number of as yet unidentified target proteins.
messages: Ubiquitin-like modifier.

3055:CHLRE 10g459200v5
gene id: 3055:CHLRE_10g459200v5
uniprot id: Q93Z22
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
messages: Cell membrane

3055:CHLRE 07g357850v5
gene id: 3055:CHLRE_07g357850v5
uniprot id: A8JI94
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL22 family.

3055:CHLRE 08g369800v5
gene id: 3055:CHLRE_08g369800v5
uniprot id: A8J484
names: Similarity
messages: Belongs to the deoxyhypusine synthase family.

3055:CHLRE 12g492300v5
gene id: 3055:CHLRE_12g492300v5
uniprot id: Q6V9B0
names: Similarity
messages: Belongs to the complex I 20 kDa subunit family.

3055:CHLRE 12g519850v5
gene id: 3055:CHLRE_12g519850v5
uniprot id: A8J620
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity.
messages: Belongs to the SPC24 family.
messages: Component of the NDC80 complex.
messages: Nucleus
messages: kinetochore

3055:CHLRE 09g400650v5
gene id: 3055:CHLRE_09g400650v5
uniprot id: A8J1G8
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS6 family.

3055:CHLRE 14g628350v5
gene id: 3055:CHLRE_14g628350v5
uniprot id: A8IV05
names: Similarity
messages: Belongs to the peptidase T1B family. HslV subfamily.

3055:CHLRE 03g164101v5
gene id: 3055:CHLRE_03g164101v5
uniprot id: A8IFM6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the snRNP Sm proteins family.
messages: Nucleus

3055:CHLRE 11g467766v5
gene id: 3055:CHLRE_11g467766v5
uniprot id: A8JC00
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the RtcB family.
messages: Binds 2 manganese ions per subunit.
messages: Catalytic component of the tRNA-splicing ligase complex.
messages: Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
messages: Ligation probably proceeds through 3 nucleotidyl transfer steps, with 2',3'-cyclic phosphate termini being hydrolyzed to 3'-P termini in a step that precedes 3'-P activation with GMP. In the first nucleotidyl transfer step, RTCB reacts with GTP to form a covalent RTCB-histidine-GMP intermediate with release of PPi; in the second step, the GMP moiety is transferred to the RNA 3'-P; in the third step, the 5'-OH from the opposite RNA strand attacks the activated 3'-P to form a 3',5'-phosphodiester bond and release GMP.

3055:CHLRE 14g615350v5
gene id: 3055:CHLRE_14g615350v5
uniprot id: A8JAR3
names: Cofactor
names: Similarity
messages: Belongs to the truncated hemoglobin family. Group I subfamily.
messages: Binds 1 heme group per subunit.

3055:CHLRE 16g652100v5
gene id: 3055:CHLRE_16g652100v5
uniprot id: A8J9E6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.
messages: Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.
messages: Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
messages: Cytoplasm

3055:CHLRE 17g707700v5
gene id: 3055:CHLRE_17g707700v5
uniprot id: Q8LKG7
names: Similarity
messages: Belongs to the NRAMP (TC 2.A.55) family.

3055:CHLRE 03g144164v5
gene id: 3055:CHLRE_03g144164v5
uniprot id: A8J375
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 16g667450v5
gene id: 3055:CHLRE_16g667450v5
uniprot id: A8ISI1
names: Similarity
messages: Belongs to the TUB family.

3055:CHLRE 17g715750v5
gene id: 3055:CHLRE_17g715750v5
uniprot id: A8JD99
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the WD repeat SEC13 family.
messages: nuclear pore complex

3055:CHLRE 04g221700v5
gene id: 3055:CHLRE_04g221700v5
uniprot id: Q9FV97
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the cytochrome c oxidase subunit 3 family.
messages: Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)). The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
messages: Membrane

3055:CHLRE 06g249900v5
gene id: 3055:CHLRE_06g249900v5
uniprot id: A8HYW3
names: Similarity
messages: Belongs to the adenylate kinase family.

3055:CHLRE 13g571650v5
gene id: 3055:CHLRE_13g571650v5
uniprot id: A8HSJ0
names: Similarity
messages: Belongs to the archaeal Rpo10/eukaryotic RPB10 RNA polymerase subunit family.

3055:CHLRE 02g115150v5
gene id: 3055:CHLRE_02g115150v5
uniprot id: A8I2T2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3055:CHLRE 06g275300v5
gene id: 3055:CHLRE_06g275300v5
uniprot id: A8HVC8
names: Similarity
messages: Belongs to the CCDC25 family.

3055:CHLRE 06g275650v5
gene id: 3055:CHLRE_06g275650v5
uniprot id: A8HVA6
names: Similarity
messages: Belongs to the proteasome subunit S3 family.

3055:CHLRE 01g047950v5
gene id: 3055:CHLRE_01g047950v5
uniprot id: A8HN58
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Although similar to the small GTPase superfamily, lacks the conserved catalytic Gln in position 79 which is replaced by a Ser residue, possibly explaining the weak GTPase activity. In contrast to other members of the family, it is not prenylated (PubMed:21505417).
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Component of the IFT complex B, the core composed of IFT25, IFT27, IFT46, IFT52, IFT74, IFT81 and IFT88 as well as associated subunits IFT20, IFT57, IFT80 and IFT172. Interacts with IFT25; the interaction is direct.
messages: Small GTPase-like component of the intraflagellar transport (IFT) complex B. Forms a subcomplex within the IFT complex B with IFT25. Has very low GTPase activity either because it lacks the conserved catalytic Gln in position 79 or because it requires some GTPase-activating protein (GAP) for GTP turnover.
messages: flagellum
messages: flagellum basal body

3055:CHLRE 13g586550v5
gene id: 3055:CHLRE_13g586550v5
uniprot id: A8HUL5
names: Similarity
messages: Belongs to the cytochrome b5 family.

3055:CHLRE 13g573900v5
gene id: 3055:CHLRE_13g573900v5
uniprot id: A8HSY0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
messages: Membrane

3055:CHLRE 09g411900v5
gene id: 3055:CHLRE_09g411900v5
uniprot id: A8J4R9
names: Function
names: Similarity
messages: Belongs to the SHMT family.
messages: Interconversion of serine and glycine.

3055:CHLRE 06g291700v5
gene id: 3055:CHLRE_06g291700v5
uniprot id: A8J2J7
uniprot id: P12759
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the flagellar radial spoke RSP3 family.
messages: Flagellar radial spokes contribute to the regulation of dynein arm activity and thus the pattern of flagellar bending. They consist of a thin stalk, which is attached to the a subfiber of the outer doublet microtubule, and a bulbous head, which is attached to the stalk and appears to interact with the projections from the central pair of microtubules.
messages: Interacts with FAP91.
messages: Protein 3 is one of the 5 radial spoke proteins that are phosphorylated.
messages: Protein 3 may attach the radial spoke to the outer doublet microtubule or is required to form a stable spoke structure.
messages: Protein 3a might only differ from protein 3 in being unphosphorylated.
messages: flagellum axoneme

3055:CHLRE 01g027100v5
gene id: 3055:CHLRE_01g027100v5
uniprot id: A8HQ85
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S26 family. IMP2 subfamily.
messages: Membrane
messages: Mitochondrion inner membrane

3055:CHLRE 08g374400v5
gene id: 3055:CHLRE_08g374400v5
uniprot id: A8IZG4
names: Function
names: Similarity
messages: Belongs to the WD repeat CIA1 family.
messages: Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.

3055:CHLRE 12g549750v5
gene id: 3055:CHLRE_12g549750v5
uniprot id: A8IYG8
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 02g082000v5
gene id: 3055:CHLRE_02g082000v5
uniprot id: A8I815
names: Similarity
messages: Belongs to the Nth/MutY family.

3055:CHLRE 03g189250v5
gene id: 3055:CHLRE_03g189250v5
uniprot id: Q39572
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane

3055:CHLRE 06g262050v5
gene id: 3055:CHLRE_06g262050v5
uniprot id: A8HXA9
names: Similarity
messages: Belongs to the aldose epimerase family.

3055:CHLRE 06g274750v5
gene id: 3055:CHLRE_06g274750v5
uniprot id: A8HV98
uniprot id: P54347
names: Caution
names: Developmental Stage
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Can be acetylated to form H2BK33ac and H2BK34ac (By similarity). Acetylated mainly on the ubiquitinated form.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monoubiquitinated to form H2BK143ub1; which is increased during the light period and may give a specific tag for epigenetic transcriptional activation.
messages: Nucleus
messages: The N-terminus is blocked.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H2BK33ac = acetylated Lys-41; H2BK34ac = acetylated Lys-42; H2BK143ub1 = monoubiquitinated Lys-149.
messages: Up-regulated during the dark period.

3055:CHLRE 07g331500v5
gene id: 3055:CHLRE_07g331500v5
uniprot id: A8IH07
names: Similarity
messages: Belongs to the peptidase S14 family.

3055:CHLRE 12g550850v5
gene id: 3055:CHLRE_12g550850v5
uniprot id: P11471
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the psbP family.
messages: May be involved in the regulation of photosystem II. Required for high levels of photosynthesis oxygen evolution.
messages: OEE2 is not necessary for the accumulation of the core PSII particle or for the accumulation of either OEE1 or OEE3.
messages: chloroplast thylakoid membrane

3055:CHLRE 13g585150v5
gene id: 3055:CHLRE_13g585150v5
uniprot id: A8HUE0
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-6 family.
messages: Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
messages: Cytoplasm
messages: Monomer. Associates with the 60S ribosomal subunit.
messages: nucleolus

3055:CHLRE 10g440150v5
gene id: 3055:CHLRE_10g440150v5
uniprot id: A8IIJ9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CMC family.
messages: Mitochondrion

3055:CHLRE 09g394100v5
gene id: 3055:CHLRE_09g394100v5
uniprot id: A8IZV8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the adaptor complexes small subunit family.
messages: Golgi apparatus

3055:CHLRE 09g391986v5
gene id: 3055:CHLRE_09g391986v5
uniprot id: A8J056
names: Function
names: Similarity
messages: Acylhydrolase that catalyzes the hydrolysis of phospholipids at the sn-1 position.
messages: Belongs to the AB hydrolase superfamily. Lipase family.

3055:CHLRE 03g207700v5
gene id: 3055:CHLRE_03g207700v5
uniprot id: A8IX41
names: Similarity
messages: Belongs to the FPP/GGPP synthase family.

3055:CHLRE 12g505750v5
gene id: 3055:CHLRE_12g505750v5
uniprot id: A8IJY1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: nucleolus

3055:CHLRE 04g227400v5
gene id: 3055:CHLRE_04g227400v5
uniprot id: A2I2U7
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g272650v5
gene id: 3055:CHLRE_06g272650v5
uniprot id: Q75VY7
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 04g229700v5
gene id: 3055:CHLRE_04g229700v5
uniprot id: A8ITF3
names: Similarity
messages: Belongs to the UDPGP type 1 family.

3055:CHLRE 13g568900v5
gene id: 3055:CHLRE_13g568900v5
uniprot id: A8HS59
names: Similarity
messages: Belongs to the universal ribosomal protein uL22 family.

3055:CHLRE 09g417200v5
gene id: 3055:CHLRE_09g417200v5
uniprot id: A8J538
names: Similarity
messages: Belongs to the CSN7/EIF3M family. CSN7 subfamily.

3055:CHLRE 01g045550v5
gene id: 3055:CHLRE_01g045550v5
uniprot id: A8HN02
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 03g171550v5
gene id: 3055:CHLRE_03g171550v5
uniprot id: Q84X76
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 07g353350v5
gene id: 3055:CHLRE_07g353350v5
uniprot id: A8JFR8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TAF9 family.
messages: Nucleus

3055:CHLRE 01g032050v5
gene id: 3055:CHLRE_01g032050v5
uniprot id: A8HQM1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleotide-sugar transporter family. UDP-galactose:UMP antiporter (TC 2.A.7.11) subfamily.
messages: Membrane

3055:CHLRE 10g450400v5
gene id: 3055:CHLRE_10g450400v5
uniprot id: Q6V9B3
names: Similarity
messages: Belongs to the complex I 24 kDa subunit family.

3055:CHLRE 01g027950v5
gene id: 3055:CHLRE_01g027950v5
uniprot id: Q6RCE1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IFT74 family.
messages: Component of the IFT complex B, the core composed of IFT25, IFT27, IFT46, IFT52, IFT74, IFT81 and IFT88 as well as associated subunits IFT20, IFT57, IFT80 and IFT172. Interacts with IFT81; the interaction is direct: within the IFT complex B, IFT74 and IFT81 mediate the transport of tubulin within the cilium. Interacts (via basic region) with beta-tubulin (via acidic region); interaction is direct.
messages: Component of the intraflagellar transport (IFT) complex B: together with IFT81, forms a tubulin-binding module that specifically mediates transport of tubulin within the cilium. Binds beta-tubulin via its basic region. Required for ciliogenesis.
messages: cilium

3055:CHLRE 01g010350v5
gene id: 3055:CHLRE_01g010350v5
uniprot id: A8HP70
names: Similarity
messages: Belongs to the LipB family.

3055:CHLRE 03g155800v5
gene id: 3055:CHLRE_03g155800v5
uniprot id: A8J7J8
names: Similarity
messages: Belongs to the EIF1AD family.

3055:CHLRE 04g217906v5
gene id: 3055:CHLRE_04g217906v5
uniprot id: A8JER1
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 07g328900v5
gene id: 3055:CHLRE_07g328900v5
uniprot id: A8IHF4
names: Similarity
messages: Belongs to the protein kinase superfamily.

3055:CHLRE 09g416350v5
gene id: 3055:CHLRE_09g416350v5
uniprot id: A8J513
names: Similarity
messages: Belongs to the nucleosome assembly protein (NAP) family.

3055:CHLRE 06g289550v5
gene id: 3055:CHLRE_06g289550v5
uniprot id: A8J2G4
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL32 family.

3055:CHLRE 03g159254v5
gene id: 3055:CHLRE_03g159254v5
uniprot id: Q8RUT6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Cell membrane
messages: Membrane

3055:CHLRE 03g183100v5
gene id: 3055:CHLRE_03g183100v5
uniprot id: A8JH77
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 06g268300v5
gene id: 3055:CHLRE_06g268300v5
uniprot id: Q42680
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 01g036750v5
gene id: 3055:CHLRE_01g036750v5
uniprot id: A8HM72
names: Similarity
messages: Belongs to the eukaryotic/archaeal PrmC-related family.

3055:CHLRE 06g273600v5
gene id: 3055:CHLRE_06g273600v5
uniprot id: A8HVK4
names: Similarity
messages: In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family.
messages: In the N-terminal section; belongs to the ubiquitin family.

3055:CHLRE 16g648500v5
gene id: 3055:CHLRE_16g648500v5
uniprot id: A8J9M0
names: Similarity
names: Subunit
messages: Belongs to the histone H3 family.
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 09g397734v5
gene id: 3055:CHLRE_09g397734v5
uniprot id: A8J0I1
names: Similarity
messages: Belongs to the cytochrome P450 family.

3055:CHLRE 06g250250v5
gene id: 3055:CHLRE_06g250250v5
uniprot id: A8HYU2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the V-ATPase C subunit family.
messages: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity.
messages: V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex.

3055:CHLRE 16g687500v5
gene id: 3055:CHLRE_16g687500v5
uniprot id: A8ISF0
names: Similarity
messages: Belongs to the actin family.

3055:CHLRE 13g570050v5
gene id: 3055:CHLRE_13g570050v5
uniprot id: A8HSB2
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 10g435350v5
gene id: 3055:CHLRE_10g435350v5
uniprot id: A8IGL4
names: Similarity
messages: Belongs to the endosulfine family.

3055:CHLRE 10g438100v5
gene id: 3055:CHLRE_10g438100v5
uniprot id: A8IG47
names: Similarity
messages: Belongs to the HAD-like hydrolase superfamily.

3055:CHLRE 13g603700v5
gene id: 3055:CHLRE_13g603700v5
uniprot id: A8JAV1
uniprot id: P53498
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
messages: Belongs to the actin family.
messages: Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.
messages: cytoskeleton

3055:CHLRE 02g089200v5
gene id: 3055:CHLRE_02g089200v5
uniprot id: A8I904
uniprot id: Q5QD03
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
messages: Chromosome
messages: Histone methyltransferase. Monomethylates specifically 'Lys-9' of histone H3. H3 'Lys-9Me1' (H3K9me1) functions as an epigenetic mark of repressed chromatin.
messages: Loss of function mutant (T-DNA insertion) releases the transcriptional silencing of tandem transgenes.
messages: Nucleus

3055:CHLRE 12g560750v5
gene id: 3055:CHLRE_12g560750v5
uniprot id: A8JHP3
names: Similarity
messages: Belongs to the mTERF family.

3055:CHLRE 03g145907v5
gene id: 3055:CHLRE_03g145907v5
uniprot id: A8J2Y5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. TRM7 subfamily.
messages: Cytoplasm
messages: Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.

3055:CHLRE 02g092600v5
gene id: 3055:CHLRE_02g092600v5
uniprot id: Q4U0V8
names: Similarity
names: Subunit
messages: Belongs to the aerobic coproporphyrinogen-III oxidase family.
messages: Homodimer.

3055:CHLRE 02g095106v5
gene id: 3055:CHLRE_02g095106v5
uniprot id: A8JEJ8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane

3055:CHLRE 03g165400v5
gene id: 3055:CHLRE_03g165400v5
uniprot id: A8IFF5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COX16 family.
messages: Membrane

3055:CHLRE 03g171350v5
gene id: 3055:CHLRE_03g171350v5
uniprot id: A8IEL6
names: Similarity
messages: Belongs to the SecY/SEC61-alpha family.

3055:CHLRE 06g303500v5
gene id: 3055:CHLRE_06g303500v5
uniprot id: A8INC7
names: Subcellular Location Annotation
messages: Nucleus

3055:CHLRE 09g400100v5
gene id: 3055:CHLRE_09g400100v5
uniprot id: A8J1F9
names: Function
messages: May be involved in environmental stress response.

3055:CHLRE 09g392692v5
gene id: 3055:CHLRE_09g392692v5
uniprot id: A8J073
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mago nashi family.
messages: Nucleus

3055:CHLRE 12g504850v5
gene id: 3055:CHLRE_12g504850v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g263550v5
gene id: 3055:CHLRE_06g263550v5
uniprot id: A8HX34
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxiredoxin-like PRXL2 family. PRXL2A subfamily.
messages: Cytoplasm

3055:CHLRE 06g252401v5
gene id: 3055:CHLRE_06g252401v5
uniprot id: A8HYH9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

3055:CHLRE 03g170750v5
gene id: 3055:CHLRE_03g170750v5
uniprot id: A8IEP3
names: Similarity
messages: Belongs to the universal ribosomal protein uS4 family.

3055:CHLRE 01g043350v5
gene id: 3055:CHLRE_01g043350v5
uniprot id: Q9ZWM5
names: Function
names: Subcellular Location Annotation
messages: Catalyzes a two-step oxygenase reaction involved in the synthesis of chlorophyll b. Acts specifically on the non-esterified chlorophyllide a and not on chlorophyll a.
messages: chloroplast inner membrane
messages: chloroplast thylakoid membrane

3055:CHLRE 10g442800v5
gene id: 3055:CHLRE_10g442800v5
uniprot id: A8II65
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.
messages: Membrane

3055:CHLRE 17g700750v5
gene id: 3055:CHLRE_17g700750v5
uniprot id: A8IQG4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the acetate uptake transporter (AceTr) (TC 2.A.96) family.
messages: Membrane

3055:CHLRE 01g061807v5
gene id: 3055:CHLRE_01g061807v5
uniprot id: A8JCT0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the BI1 family.
messages: Membrane

3055:CHLRE 14g612700v5
gene id: 3055:CHLRE_14g612700v5
uniprot id: A8JAM0
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the DRC7 family.
messages: Component of the nexin-dynein regulatory complex (N-DRC) a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes (PubMed:23427265, PubMed:25411337). Involved in the regulation of flagellar motility (PubMed:21289096).
messages: Component of the nexin-dynein regulatory complex (N-DRC), composed of at least DRC1, DRC2, DRC3, DRC4, DRC5, DRC6, DRC7, DRC8, DRC9, DRC10 and DRC11 (PubMed:25411337, PubMed:23427265). Interacts with DRC5 (PubMed:23427265).
messages: Phosphorylated.
messages: cilium axoneme
messages: flagellum
messages: flagellum axoneme

3055:CHLRE 16g674627v5
gene id: 3055:CHLRE_16g674627v5
uniprot id: A8J3B5
names: Subcellular Location Annotation
messages: cilium basal body

3055:CHLRE 06g283750v5
gene id: 3055:CHLRE_06g283750v5
uniprot id: A1JHN0
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UbiA prenyltransferase family.
messages: Inhibited by haloxydine (3,5-dichloro-2,6-difluoro-4-haloxypyridine).
messages: Involved in the synthesis of plastoquinone-9. Can use both homogentisic acid and 2,5-dihydroxyphenylacetic acid gamma-lactone as prenyl acceptors, and solanesyl diphosphate > farnesyl diphosphate > geranylgeranyl diphosphate >> phytyl diphosphate as prenyl donors. Do not catalyze the decardoxylation of homogentisate uncoupled from prenylation.
messages: chloroplast membrane

3055:CHLRE 01g061442v5
gene id: 3055:CHLRE_01g061442v5
uniprot id: A8JCS9
names: Similarity
messages: Belongs to the SKP1 family.

3055:CHLRE 17g719550v5
gene id: 3055:CHLRE_17g719550v5
uniprot id: A8JIK2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SGF11 family.
messages: Nucleus

3055:CHLRE 02g074600v5
gene id: 3055:CHLRE_02g074600v5
uniprot id: A8I9X2
names: Similarity
messages: Belongs to the DeSI family.

3055:CHLRE 15g641200v5
gene id: 3055:CHLRE_15g641200v5
uniprot id: A8JHJ5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 13g568025v5
gene id: 3055:CHLRE_13g568025v5
uniprot id: A8HS19
names: Similarity
messages: Belongs to the CMC4 family.

3055:CHLRE 07g325741v5
gene id: 3055:CHLRE_07g325741v5
uniprot id: Q8LP67
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
messages: Membrane
messages: Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport.

3055:CHLRE 09g386650v5
gene id: 3055:CHLRE_09g386650v5
uniprot id: A8J1B6
uniprot id: P27080
names: Activity Regulation
names: Caution
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: ADP:ATP antiporter that mediates import of ADP into the mitochondrial matrix for ATP synthesis, and export of ATP out to fuel the cell (By similarity). Cycles between the cytoplasmic-open state (c-state) and the matrix-open state (m-state): operates by the alternating access mechanism with a single substrate-binding site intermittently exposed to either the cytosolic (c-state) or matrix (m-state) side of the inner mitochondrial membrane (By similarity).
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Catalyzes the exchange of ADP and ATP across the membrane.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane
messages: Mitochondrion inner membrane
messages: Monomer.
messages: The matrix-open state (m-state) is inhibited by the membrane-permeable bongkrekic acid (BKA). The cytoplasmic-open state (c-state) is inhibited by the membrane-impermeable toxic inhibitor carboxyatractyloside (CATR).
messages: The transmembrane helices are not perpendicular to the plane of the membrane, but cross the membrane at an angle. At least 2 of the odd-numbered transmembrane helices exhibit a sharp kink, due to the presence of a conserved proline residue.

3055:CHLRE 17g713450v5
gene id: 3055:CHLRE_17g713450v5
uniprot id: A8JDE1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 06g279250v5
gene id: 3055:CHLRE_06g279250v5
uniprot id: A8J1Y0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the pym family.
messages: Cytoplasm

3055:CHLRE 12g515850v5
gene id: 3055:CHLRE_12g515850v5
uniprot id: A8JHX0
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PCNA family.
messages: Nucleus
messages: This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand.

3055:CHLRE 05g244700v5
gene id: 3055:CHLRE_05g244700v5
uniprot id: A8I5E0
names: Subcellular Location Annotation
messages: Endoplasmic reticulum membrane

3055:CHLRE 04g215850v5
gene id: 3055:CHLRE_04g215850v5
uniprot id: A8J9Q1
names: Similarity
messages: Belongs to the importin alpha family.

3055:CHLRE 06g284100v5
gene id: 3055:CHLRE_06g284100v5
uniprot id: Q94CJ2
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 16g692050v5
gene id: 3055:CHLRE_16g692050v5
uniprot id: A8JBG7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the syntaxin family.
messages: Membrane

3055:CHLRE 09g387150v5
gene id: 3055:CHLRE_09g387150v5
uniprot id: A1YTN3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HSF family.
messages: Nucleus

3055:CHLRE 04g225900v5
gene id: 3055:CHLRE_04g225900v5
uniprot id: A8IT75
names: Similarity
messages: Belongs to the synaptobrevin family.

3055:CHLRE 16g650100v5
gene id: 3055:CHLRE_16g650100v5
uniprot id: A0A2K3CSU5
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the PetN family.
messages: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
messages: Membrane
messages: The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.

3055:CHLRE 02g142150v5
gene id: 3055:CHLRE_02g142150v5
uniprot id: A8J0Q1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TMEM18 family.
messages: Membrane

3055:CHLRE 06g266650v5
gene id: 3055:CHLRE_06g266650v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 13g568650v5
gene id: 3055:CHLRE_13g568650v5
uniprot id: A0A2K3CZL0
uniprot id: A8HS48
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein eS1 family.
messages: Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S).
messages: Cytoplasm

3055:CHLRE 13g565800v5
gene id: 3055:CHLRE_13g565800v5
uniprot id: A2PZC2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the RGP family.
messages: Golgi apparatus
messages: Probable UDP-L-arabinose mutase involved in the biosynthesis of cell wall non-cellulosic polysaccharides.

3055:CHLRE 13g592050v5
gene id: 3055:CHLRE_13g592050v5
uniprot id: A8IWA3
names: Similarity
names: Subunit
messages: Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
messages: Homotetramer.

3055:CHLRE 10g419800v5
gene id: 3055:CHLRE_10g419800v5
uniprot id: A8ICX2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
messages: Membrane

3055:CHLRE 16g666150v5
gene id: 3055:CHLRE_16g666150v5
uniprot id: A8JF70
names: Disruption Phenotype
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ODA1/DCC2 family.
messages: Component of the outer dynein arm complex required for assembly of the outer dynein arm-docking complex (ODA-DC) and the outer dynein arm onto the doublet microtubule.
messages: Component of the outer dynein arm complex.
messages: Impaired motility and outer dynein arm defects.
messages: cilium axoneme

3055:CHLRE 03g156750v5
gene id: 3055:CHLRE_03g156750v5
uniprot id: A8J7J2
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TCP-1 chaperonin family.
messages: Cytoplasm

3055:CHLRE 05g242000v5
gene id: 3055:CHLRE_05g242000v5
uniprot id: A8I531
names: Activity Regulation
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the Mg-chelatase subunits D/I family.
messages: Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
messages: Redox regulation; active in reducing conditions, inactive in oxidizing conditions.
messages: The magnesium chelatase complex is a heterotrimer consisting of subunits CHLI, CHLD, AND CHLH.
messages: chloroplast

3055:CHLRE 04g232104v5
gene id: 3055:CHLRE_04g232104v5
uniprot id: Q93WL4
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 17g731950v5
gene id: 3055:CHLRE_17g731950v5
uniprot id: A8JFE3
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Membrane

3055:CHLRE 09g405200v5
gene id: 3055:CHLRE_09g405200v5
uniprot id: A8J810
names: Similarity
messages: Belongs to the universal ribosomal protein uL13 family.

3055:CHLRE 17g710550v5
gene id: 3055:CHLRE_17g710550v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 02g097900v5
gene id: 3055:CHLRE_02g097900v5
uniprot id: A8I263
names: Miscellaneous
names: Similarity
names: Subunit
messages: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
messages: Homodimer.
messages: In eukaryotes there are cytoplasmic, mitochondrial and chloroplastic isozymes.

3055:CHLRE 03g194400v5
gene id: 3055:CHLRE_03g194400v5
uniprot id: A8IWL4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit I family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3055:CHLRE 06g307150v5
gene id: 3055:CHLRE_06g307150v5
uniprot id: A8IMV2
names: Similarity
messages: Belongs to the glycosyl hydrolase 14 family.

3055:CHLRE 17g708600v5
gene id: 3055:CHLRE_17g708600v5
uniprot id: A8IR79
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 17g708250v5
gene id: 3055:CHLRE_17g708250v5
uniprot id: A8IR89
names: Similarity
messages: Belongs to the small GTPase superfamily. Arf family.

3055:CHLRE 02g091700v5
gene id: 3055:CHLRE_02g091700v5
uniprot id: Q8LKK4
names: Subcellular Location Annotation
messages: cilium axoneme

3055:CHLRE 06g285250v5
gene id: 3055:CHLRE_06g285250v5
uniprot id: A8J287
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 07g325500v5
gene id: 3055:CHLRE_07g325500v5
uniprot id: A8I7P5
names: Similarity
messages: Belongs to the Mg-chelatase subunit H family.

3055:CHLRE 06g279150v5
gene id: 3055:CHLRE_06g279150v5
uniprot id: A8J1X8
names: Similarity
messages: Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.

3055:CHLRE 06g308350v5
gene id: 3055:CHLRE_06g308350v5
uniprot id: A8IMP0
names: Similarity
messages: Belongs to the PPP phosphatase family.

3055:CHLRE 12g494900v5
gene id: 3055:CHLRE_12g494900v5
uniprot id: A8JDN1
names: Similarity
messages: Belongs to the PPP phosphatase family.

3055:CHLRE 12g558000v5
gene id: 3055:CHLRE_12g558000v5
uniprot id: A8JGX6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.

3055:CHLRE 05g232850v5
gene id: 3055:CHLRE_05g232850v5
uniprot id: Q9LKH0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the COX17 family.
messages: Mitochondrion intermembrane space

3055:CHLRE 16g679950v5
gene id: 3055:CHLRE_16g679950v5
uniprot id: A8J3U8
names: Similarity
messages: Belongs to the activator 1 small subunits family.

3055:CHLRE 02g147100v5
gene id: 3055:CHLRE_02g147100v5
uniprot id: A8J0Z0
names: Similarity
messages: Belongs to the TPPP family.

3055:CHLRE 02g092850v5
gene id: 3055:CHLRE_02g092850v5
uniprot id: Q9XHH2
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dynein light chain LC1-type family.
messages: Interacts with OCAD2, a outer arm dynein heavy chain (PubMed:19620633, PubMed:22157010). Interacts with tubulin (previously called p45) located within the A-tubule of the outer doublets in a ATP-independent manner (PubMed:19620633, PubMed:10876244, PubMed:22157010).
messages: Outer (ODAs) and inner (IDAs) dynein arms contain the molecular motors that generate the force to move cilia by ATP-dependent reactions. There are two mechanosensory systems that monitor and respond to the mechanical state (curvature) of the axoneme. One system involves the central pair microtubule complex and radial spokes and the second system involves the outer dynein arms.
messages: Part of the multisubunit axonemal ATPase complexes that generate the force for flagellar motility and govern beat frequency (PubMed:19620633). Component of the outer arm dynein (ODA) (PubMed:19620633). May be involved in a mechanosensory feedback mechanism controlling ODA activity based on external conformational cues by tethering the outer arm dynein heavy chain (ODA2) to the A-tubule of the outer doublet microtubules within the axoneme (PubMed:22157010, PubMed:10353837, PubMed:19620633).
messages: flagellum axoneme

3055:CHLRE 17g738300v5
gene id: 3055:CHLRE_17g738300v5
uniprot id: A8JCC6
uniprot id: P29763
names: Function
names: Similarity
names: Subunit
messages: Belongs to the eukaryotic ribosomal protein P1/P2 family.
messages: P1 and P2 exist as dimers at the large ribosomal subunit.
messages: Plays an important role in the elongation step of protein synthesis.

3055:CHLRE 12g538400v5
gene id: 3055:CHLRE_12g538400v5
uniprot id: A8IVC2
names: Similarity
messages: Belongs to the eukaryotic RPB7/RPC8 RNA polymerase subunit family.

3055:CHLRE 09g403800v5
gene id: 3055:CHLRE_09g403800v5
uniprot id: A8J1M5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the dynein heavy chain family.
messages: flagellum
messages: flagellum axoneme

3055:CHLRE 06g271250v5
gene id: 3055:CHLRE_06g271250v5
uniprot id: A8HSA7
uniprot id: Q6LCW8
names: Caution
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Acetylation is generally linked to gene activation. Acetylated to form H3K9ac (11%), H3K14ac (17%), H3K18ac (11%), H3K23ac (16%) and H3K27ac (7%). H3K4, H3K35 and H3K36 are not acetylated. H3K4me prevents acetylation. 32% of the histone H3 are acetylated with, on average, 2.4 acetyl-Lys. They are all continuously deacatylated and re-acetylated with a half-life of approximately 2 min.
messages: Belongs to the histone H3 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Monomethylated to form H3K4me1 (81%), H3K9me1 (16%), H3K27me1 (25%), H3K35me1 (25%) and H3K36me1 (5%). No methylation at H3K14, H3K18 and H3K23. Methylated by a protein complex that includes Mut11. Set1 methylates specifically H3K4. H3K4me1 is associated with silenced euchromatin. Set3 forms H3K9me1, while H3K9me2 is undetected. H3K9me1 is specifically associated with silent, multi-copy transgenes.
messages: No phosphorylation detected.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.
messages: To ensure consistency between histone entries, we follow the 'Brno' nomenclature for histone modifications, with positions referring to those used in the literature for the 'closest' model organism. Due to slight variations in histone sequences between organisms and to the presence of initiator methionine in UniProtKB/Swiss-Prot sequences, the actual positions of modified amino acids in the sequence generally differ. In this entry the following conventions are used: H3K4 = Lys-5; H3K4me = methylated Lys-5; H3K9ac = acetylated Lys-10; H3K9me = methylated Lys-10; H3S10ph = phosphorylated Ser-11; H3T11ph = phosphorylated Thr-12; H3K14 = Lys-15; H3K14ac = acetylated Lys-15; H3K18 = Lys-19; H3K18ac = acetylated Lys-19; H3K23 = Lys-24; H3K23ac = acetylated Lys-24; H3K27ac = acetylated Lys-28; H3K27me = methylated Lys-28; H3K35 = Lys-36; H3K35me = methylated Lys-36; H3K36 = Lys-37; H3K36me = methylated Lys-37.

3055:CHLRE 01g000450v5
gene id: 3055:CHLRE_01g000450v5
uniprot id: A8JD35
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the glycosyltransferase 77 family.
messages: Golgi apparatus membrane

3055:CHLRE 08g379350v5
gene id: 3055:CHLRE_08g379350v5
uniprot id: Q84XW3
names: Subcellular Location Annotation
messages: Membrane
messages: chloroplast membrane

3055:CHLRE 07g314600v5
gene id: 3055:CHLRE_07g314600v5
uniprot id: A8I668
names: Similarity
messages: Belongs to the ribose 5-phosphate isomerase family.

3055:CHLRE 03g146127v5
gene id: 3055:CHLRE_03g146127v5
uniprot id: A8J2Y0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the UPF0602 family.
messages: centrosome

3055:CHLRE 10g449100v5
gene id: 3055:CHLRE_10g449100v5
uniprot id: A8HZM9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 03g178300v5
gene id: 3055:CHLRE_03g178300v5
uniprot id: A8IDN7
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PRP38 family.
messages: Nucleus
messages: Required for pre-mRNA splicing.

3055:CHLRE 13g577500v5
gene id: 3055:CHLRE_13g577500v5
uniprot id: A8HTE8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the VTI1 family.
messages: Membrane

3055:CHLRE 06g279900v5
gene id: 3055:CHLRE_06g279900v5
uniprot id: Q68UI8
names: Domain
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CCDC61 family.
messages: Required for normal flagella and striated fiber formation.
messages: The coiled-coil domain is involved in microtubule-binding.
messages: flagellum basal body

3055:CHLRE 04g215050v5
gene id: 3055:CHLRE_04g215050v5
uniprot id: Q4VKB5
names: Similarity
messages: Belongs to the sterol desaturase family.

3055:CHLRE 12g531000v5
gene id: 3055:CHLRE_12g531000v5
uniprot id: Q6QBS7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
messages: Membrane

3055:CHLRE 11g467535v5
gene id: 3055:CHLRE_11g467535v5
uniprot id: A8JF47
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the mitochondrial carrier (TC 2.A.29) family.
messages: Membrane

3055:CHLRE 17g706850v5
gene id: 3055:CHLRE_17g706850v5
uniprot id: A8IRB6
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 13g587100v5
gene id: 3055:CHLRE_13g587100v5
uniprot id: A8HUP3
names: Similarity
messages: Belongs to the HY2 family.

3055:CHLRE 06g257601v5
gene id: 3055:CHLRE_06g257601v5
uniprot id: Q9FE86
names: Function
names: Similarity
messages: Belongs to the peroxiredoxin family.
messages: Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively.

3055:CHLRE 03g159500v5
gene id: 3055:CHLRE_03g159500v5
uniprot id: A8J7E8
names: Similarity
messages: Belongs to the Orn/Lys/Arg decarboxylase class-II family.

3055:CHLRE 12g530650v5
gene id: 3055:CHLRE_12g530650v5
uniprot id: A8IVZ9
names: Similarity
messages: Belongs to the glutamine synthetase family.

3055:CHLRE 17g713850v5
gene id: 3055:CHLRE_17g713850v5
uniprot id: A8JDD3
names: Similarity
messages: Belongs to the transferase hexapeptide repeat family.

3055:CHLRE 10g461950v5
gene id: 3055:CHLRE_10g461950v5
uniprot id: A8I1A7
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the peptidase T1B family.
messages: Component of the proteasome complex.
messages: Component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
messages: Cytoplasm
messages: Nucleus

3055:CHLRE 10g431350v5
gene id: 3055:CHLRE_10g431350v5
uniprot id: A8IBA6
names: Caution
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3055:CHLRE 09g398882v5
gene id: 3055:CHLRE_09g398882v5
uniprot id: A0A2K3DEV0
uniprot id: Q7XA07
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dynein light intermediate chain family.
messages: Cytoplasm
messages: Functions as a motor for intraflagellar retrograde transport. Functions in flagellar biogenesis.
messages: The cytoplasmic dynein complex 2 is probably composed by a DHC1B homodimer and a number of D1BLIC light intermediate chains. Interacts with FAP133, FLA10 and LC8.
messages: Up-regulated upon flagellum biogenesis.
messages: flagellum basal body
messages: flagellum membrane

3055:CHLRE 08g376000v5
gene id: 3055:CHLRE_08g376000v5
uniprot id: A8IZE0
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 02g141100v5
gene id: 3055:CHLRE_02g141100v5
uniprot id: A8J0N1
names: Similarity
messages: Belongs to the RETICULATA family.

3055:CHLRE 13g583550v5
gene id: 3055:CHLRE_13g583550v5
uniprot id: Q66YD0
names: Similarity
messages: Belongs to the PspA/IM30 family.

3055:CHLRE 10g424150v5
gene id: 3055:CHLRE_10g424150v5
uniprot id: A8ICC6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TFIIA subunit 2 family.
messages: Nucleus
messages: TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation.

3055:CHLRE 11g467648v5
gene id: 3055:CHLRE_11g467648v5
uniprot id: A8JA16
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peptidase S54 family.
messages: Membrane

3055:CHLRE 10g426000v5
gene id: 3055:CHLRE_10g426000v5
uniprot id: A8IC48
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
messages: Belongs to the URM1 family.
messages: C-terminal thiocarboxylation occurs in 2 steps, it is first acyl-adenylated (-COAMP) via the hesA/moeB/thiF part of the MOCS3 homolog, then thiocarboxylated (-COSH) via the rhodanese domain of the MOCS3 homolog.
messages: Cytoplasm

3055:CHLRE 06g309000v5
gene id: 3055:CHLRE_06g309000v5
uniprot id: Q75NZ3
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 10g418700v5
gene id: 3055:CHLRE_10g418700v5
uniprot id: A8ID30
names: Subcellular Location Annotation
messages: Cytoplasm

3055:CHLRE 04g212650v5
gene id: 3055:CHLRE_04g212650v5
uniprot id: A8J9V0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the GPN-loop GTPase family.
messages: Binds to RNA polymerase II (RNAPII).
messages: Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import.

3055:CHLRE 12g505850v5
gene id: 3055:CHLRE_12g505850v5
uniprot id: A8IJY7
names: Similarity
messages: Belongs to the GroES chaperonin family.

3055:CHLRE 07g331550v5
gene id: 3055:CHLRE_07g331550v5
uniprot id: A8IH03
names: Similarity
messages: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.

3055:CHLRE 17g709200v5
gene id: 3055:CHLRE_17g709200v5
uniprot id: A8HSB5
uniprot id: P50567
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 12g506200v5
gene id: 3055:CHLRE_12g506200v5
uniprot id: A8IJS4
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2B family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 01g052050v5
gene id: 3055:CHLRE_01g052050v5
uniprot id: A8HNJ6
names: Similarity
messages: Belongs to the CBP3 family.

3055:CHLRE 17g740700v5
gene id: 3055:CHLRE_17g740700v5
uniprot id: A8JE79
names: Similarity
messages: Belongs to the TPPP family.

3055:CHLRE 01g016750v5
gene id: 3055:CHLRE_01g016750v5
uniprot id: A8HPM5
names: Function
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ELIP/psbS family.
messages: Induced transiently by high light stress (at protein level).
messages: Required for non-photochemical quenching (NPQ), a mechanism that converts and dissipates the harmful excess absorbed light energy into heat and protect the photosynthetic apparatus from photo-oxidative damage (PubMed:27358399, PubMed:27329221). Seems involved in the activation of NPQ, possibly by promoting conformational changes required for activation of LHCSR3-dependent quenching in the antenna of photosystem II (PSII) (PubMed:27358399, PubMed:27329221).
messages: chloroplast thylakoid membrane

3055:CHLRE 16g683700v5
gene id: 3055:CHLRE_16g683700v5
uniprot id: A8IS65
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 12g506250v5
gene id: 3055:CHLRE_12g506250v5
uniprot id: Q42680
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H2A family.
messages: Chromosome
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 08g358526v5
gene id: 3055:CHLRE_08g358526v5
uniprot id: A8JID6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ADP/ATP translocase tlc family.
messages: Membrane
messages: chloroplast membrane

3055:CHLRE 07g325735v5
gene id: 3055:CHLRE_07g325735v5
uniprot id: A8JH11
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the KISH family.
messages: Golgi apparatus membrane
messages: Involved in the early part of the secretory pathway.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

3055:CHLRE 12g538450v5
gene id: 3055:CHLRE_12g538450v5
uniprot id: Q6U9W9
names: Similarity
messages: Belongs to the CDP-alcohol phosphatidyltransferase class-I family.

3055:CHLRE 06g260250v5
gene id: 3055:CHLRE_06g260250v5
uniprot id: A8HXK4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Cema family.
messages: Membrane

3055:CHLRE 12g528900v5
gene id: 3055:CHLRE_12g528900v5
uniprot id: A8J593
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the NIP7 family.
messages: Interacts with pre-ribosome complex.
messages: Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.
messages: nucleolus

3055:CHLRE 16g683750v5
gene id: 3055:CHLRE_16g683750v5
uniprot id: A8IS66
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the peroxisomal membrane protein PXMP2/4 family.
messages: Membrane

3055:CHLRE 08g360400v5
gene id: 3055:CHLRE_08g360400v5
uniprot id: A8JGH0
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CSC1 (TC 1.A.17) family.
messages: Membrane

3055:CHLRE 16g690200v5
gene id: 3055:CHLRE_16g690200v5
uniprot id: B9VMA7
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the OXA1/ALB3/YidC (TC 2.A.9.2) family.
messages: Belongs to the OXA1/ALB3/YidC family.
messages: Membrane

3055:CHLRE 02g089950v5
gene id: 3055:CHLRE_02g089950v5
uniprot id: Q8LLV9
names: Subcellular Location Annotation
messages: cilium

3055:CHLRE 02g145231v5
gene id: 3055:CHLRE_02g145231v5
uniprot id: A8J0V5
names: Similarity
messages: Belongs to the MAK16 family.

3055:CHLRE 05g237100v5
gene id: 3055:CHLRE_05g237100v5
uniprot id: A8J8B9
names: Similarity
messages: Belongs to the CEP43 family.

3055:CHLRE 10g436500v5
gene id: 3055:CHLRE_10g436500v5
uniprot id: A8IGE2
names: Similarity
messages: Belongs to the SurE nucleotidase family.

3055:CHLRE 12g529550v5
gene id: 3055:CHLRE_12g529550v5
uniprot id: Q9LLJ1
names: Similarity
messages: Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. Aurora subfamily.

3055:CHLRE 06g286400v5
gene id: 3055:CHLRE_06g286400v5
uniprot id: A8J2A8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CMC family.
messages: Mitochondrion

3055:CHLRE 06g253404v5
gene id: 3055:CHLRE_06g253404v5
uniprot id: Q94EY1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the CCDC103/PR46b family.
messages: Cytoplasm
messages: Dynein-attachment factor required for cilia motility.
messages: Homodimer.
messages: flagellum

3055:CHLRE 09g416500v5
gene id: 3055:CHLRE_09g416500v5
uniprot id: A8J518
names: Subcellular Location Annotation
messages: Cytoplasm
messages: Nucleus

3055:CHLRE 02g115200v5
gene id: 3055:CHLRE_02g115200v5
uniprot id: A8I2T0
names: Similarity
messages: Belongs to the universal ribosomal protein uL15 family.

3055:CHLRE 17g708200v5
gene id: 3055:CHLRE_17g708200v5
uniprot id: A8HVA3
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 09g411100v5
gene id: 3055:CHLRE_09g411100v5
uniprot id: A8J4Q3
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eS10 family.

3055:CHLRE 02g081550v5
gene id: 3055:CHLRE_02g081550v5
uniprot id: A8I7Y8
names: Function
names: Similarity
messages: Belongs to the adenylate kinase family. AK6 subfamily.
messages: Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity.

3055:CHLRE 03g213537v5
gene id: 3055:CHLRE_03g213537v5
uniprot id: A8JBX6
names: Similarity
names: Subunit
messages: Belongs to the NAC-beta family.
messages: Part of the nascent polypeptide-associated complex (NAC).

3055:CHLRE 06g259900v5
gene id: 3055:CHLRE_06g259900v5
uniprot id: A8HXL8
uniprot id: P12113
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the ATPase gamma chain family.
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has four main subunits: a(1), b(1), b'(1) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta, b and b' chains.
messages: In plastids the F-type ATPase is also known as CF(1)CF(0).
messages: Membrane
messages: Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
messages: chloroplast thylakoid membrane

3055:CHLRE 11g467668v5
gene id: 3055:CHLRE_11g467668v5
uniprot id: Q6UKY8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the complex I LYR family.
messages: Mitochondrion inner membrane

3055:CHLRE 02g103850v5
gene id: 3055:CHLRE_02g103850v5
uniprot id: A8I4F6
names: Similarity
messages: Belongs to the imidazoleglycerol-phosphate dehydratase family.

3055:CHLRE 08g376550v5
gene id: 3055:CHLRE_08g376550v5
uniprot id: Q9SWQ6
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.
messages: Belongs to the GAMAD family.
messages: cytoskeleton

3055:CHLRE 02g091550v5
gene id: 3055:CHLRE_02g091550v5
uniprot id: A8I9A1
names: Similarity
messages: Belongs to the Whirly family.

3055:CHLRE 02g120100v5
gene id: 3055:CHLRE_02g120100v5
uniprot id: P00873
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the RuBisCO small chain family.
messages: Heterohexadecamer of 8 large and 8 small subunits.
messages: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity.
messages: The basic functional RuBisCO is composed of a large chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric 'cap' on each end of the 'barrel'.
messages: chloroplast

3055:CHLRE 07g318800v5
gene id: 3055:CHLRE_07g318800v5
uniprot id: A8I6R6
uniprot id: P12811
names: Induction
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small heat shock protein (HSP20) family.
messages: Regulated by light only upon heat shock.
messages: chloroplast

3055:CHLRE 03g185650v5
gene id: 3055:CHLRE_03g185650v5
uniprot id: A8IRK7
names: Function
names: Subcellular Location Annotation
names: Subunit
messages: As component of a spoke-associated complex, regulates flagellar dynein activity by mediating regulatory signals between the radial spokes and dynein arms.
messages: Identified in a spoke-associated complex containing CFAP61, CFAP91 and CFAP251; the complex is associated with the radial spokes in the axoneme (PubMed:17967944). The complex associates with Calmodulin; the association is calcium sensitive (PubMed:17967944).
messages: flagellum axoneme

3055:CHLRE 10g444000v5
gene id: 3055:CHLRE_10g444000v5
uniprot id: A8II06
names: Similarity
messages: Belongs to the TRAFAC class dynamin-like GTPase superfamily. IRG family.

3055:CHLRE 12g500500v5
gene id: 3055:CHLRE_12g500500v5
uniprot id: A8IJ34
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
messages: Membrane
messages: Microsome membrane

3055:CHLRE 02g105950v5
gene id: 3055:CHLRE_02g105950v5
uniprot id: A8I439
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the AMY1 family.
messages: Nucleus

3055:CHLRE 12g548950v5
gene id: 3055:CHLRE_12g548950v5
uniprot id: Q9AXF6
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 08g376350v5
gene id: 3055:CHLRE_08g376350v5
uniprot id: A8IZD4
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ASF1 family.
messages: Nucleus

3055:CHLRE 12g519500v5
gene id: 3055:CHLRE_12g519500v5
uniprot id: B6ZCF4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. Cation/proton exchanger (CAX) subfamily.
messages: Membrane
messages: Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase.
messages: Vacuole membrane

3055:CHLRE 06g290100v5
gene id: 3055:CHLRE_06g290100v5
uniprot id: Q8S4W5
names: Similarity
messages: Belongs to the syntaxin family.

3055:CHLRE 03g177350v5
gene id: 3055:CHLRE_03g177350v5
uniprot id: A8IDT3
names: Similarity
messages: Belongs to the RETICULATA family.

3055:CHLRE 01g048800v5
gene id: 3055:CHLRE_01g048800v5
uniprot id: A8HN88
names: Similarity
messages: Belongs to the PPR family. P subfamily.

3055:CHLRE 14g617900v5
gene id: 3055:CHLRE_14g617900v5
uniprot id: A8HNX3
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

3055:CHLRE 16g676314v5
gene id: 3055:CHLRE_16g676314v5
uniprot id: A8JBC8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the eIF-3 subunit H family.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
messages: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
messages: Cytoplasm

3055:CHLRE 04g217915v5
gene id: 3055:CHLRE_04g217915v5
uniprot id: Q6IYG1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the FNT transporter (TC 2.A.44) family.
messages: Membrane

3055:CHLRE 06g273250v5
gene id: 3055:CHLRE_06g273250v5
uniprot id: H9CTH0
names: Similarity
messages: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.

3055:CHLRE 17g722000v5
gene id: 3055:CHLRE_17g722000v5
uniprot id: A8J6G6
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 12g519350v5
gene id: 3055:CHLRE_12g519350v5
uniprot id: A8J633
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the prohibitin family.
messages: Component of a prohibitin multimeric complex in mitochondrial membranes.
messages: Mitochondrion inner membrane

3055:CHLRE 09g414200v5
gene id: 3055:CHLRE_09g414200v5
uniprot id: A8J4X1
names: Similarity
messages: Belongs to the VPS26 family.

3055:CHLRE 12g495300v5
gene id: 3055:CHLRE_12g495300v5
uniprot id: A8JDM6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the HisA/HisF family.
messages: chloroplast

3055:CHLRE 09g396600v5
gene id: 3055:CHLRE_09g396600v5
uniprot id: Q8VZZ0
names: Similarity
messages: Belongs to the NARF family.

3055:CHLRE 06g283950v5
gene id: 3055:CHLRE_06g283950v5
uniprot id: A8J264
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
messages: Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.
messages: The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
messages: chloroplast thylakoid membrane

3055:CHLRE 03g194950v5
gene id: 3055:CHLRE_03g194950v5
uniprot id: Q8LK21
names: Similarity
messages: Belongs to the sigma-70 factor family.

3055:CHLRE 16g663650v5
gene id: 3055:CHLRE_16g663650v5
uniprot id: A8JFB7
names: Similarity
messages: Belongs to the TRAPP small subunits family. BET3 subfamily.

3055:CHLRE 06g274900v5
gene id: 3055:CHLRE_06g274900v5
uniprot id: P50566
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the histone H4 family.
messages: Chromosome
messages: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
messages: Nucleus
messages: The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

3055:CHLRE 16g650550v5
gene id: 3055:CHLRE_16g650550v5
uniprot id: A8J9H8
names: Similarity
messages: Belongs to the NDK family.

3055:CHLRE 14g631900v5
gene id: 3055:CHLRE_14g631900v5
uniprot id: A8IUR4
names: Similarity
names: Subunit
messages: Belongs to the ENDOU family.
messages: Monomer.

3055:CHLRE 03g181150v5
gene id: 3055:CHLRE_03g181150v5
uniprot id: A8JH45
uniprot id: Q39580
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the dynein light chain family.
messages: Consists of at least 3 heavy chains (alpha, beta and gamma), 2 intermediate chains and 8 light chains.
messages: cytoskeleton
messages: flagellum axoneme

3055:CHLRE 06g311900v5
gene id: 3055:CHLRE_06g311900v5
uniprot id: Q39573
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Protein transport. Probably involved in vesicular traffic (By similarity).

3055:CHLRE 03g196800v5
gene id: 3055:CHLRE_03g196800v5
uniprot id: A8IWT4
names: Similarity
messages: Belongs to the UPF0057 (PMP3) family.

3055:CHLRE 05g241750v5
gene id: 3055:CHLRE_05g241750v5
uniprot id: A8I520
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the PDK/BCKDK protein kinase family.
messages: Mitochondrion matrix

3055:CHLRE 07g333900v5
gene id: 3055:CHLRE_07g333900v5
uniprot id: Q6V504
names: Similarity
messages: Belongs to the complex I NDUFA8 subunit family.

3055:CHLRE 09g387250v5
gene id: 3055:CHLRE_09g387250v5
uniprot id: A8IZI4
names: Similarity
messages: Belongs to the sulfotransferase 1 family.

3055:CHLRE 12g537000v5
gene id: 3055:CHLRE_12g537000v5
uniprot id: A8IVH0
names: Subcellular Location Annotation
messages: Endoplasmic reticulum lumen

3055:CHLRE 17g734100v5
gene id: 3055:CHLRE_17g734100v5
uniprot id: A0A2K3CR84
uniprot id: A8IW34
names: Cofactor
names: Function
names: Miscellaneous
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the adenylosuccinate synthetase family.
messages: Binds 1 Mg(2+) ion per subunit.
messages: Homodimer.
messages: Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
messages: Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity).
messages: Plays an important role in the de novo pathway of purine nucleotide biosynthesis.
messages: This protein may be expected to contain an N-terminal transit peptide but none has been predicted.
messages: chloroplast

3055:CHLRE 12g560150v5
gene id: 3055:CHLRE_12g560150v5
uniprot id: Q39571
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the small GTPase superfamily. Rab family.
messages: Cell membrane
messages: Protein transport. Probably involved in vesicular traffic (By similarity).

3055:CHLRE 09g386736v5
gene id: 3055:CHLRE_09g386736v5
uniprot id: A8J1V4
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the CFAP44 family.
messages: Flagellar protein involved in sperm flagellum axoneme organization and function.
messages: flagellum
messages: flagellum axoneme

3055:CHLRE 07g325746v5
gene id: 3055:CHLRE_07g325746v5
uniprot id: Q8GUQ9
names: Similarity
messages: Belongs to the eukaryotic ribosomal protein eL38 family.

3055:CHLRE 03g182551v5
gene id: 3055:CHLRE_03g182551v5
uniprot id: A8JH68
uniprot id: P18068
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the plastocyanin family.
messages: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.
messages: chloroplast thylakoid membrane

3055:CHLRE 09g386750v5
gene id: 3055:CHLRE_09g386750v5
uniprot id: A8J1U1
names: Similarity
messages: Belongs to the heat shock protein 90 family.

3055:CHLRE 02g076800v5
gene id: 3055:CHLRE_02g076800v5
uniprot id: A8IA67
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ERG4/ERG24 family.
messages: Membrane

3055:CHLRE 13g570600v5
gene id: 3055:CHLRE_13g570600v5
uniprot id: Q4U0V9
names: Similarity
messages: Belongs to the copper transporter (Ctr) (TC 1.A.56) family. SLC31A subfamily.

3055:CHLRE 09g386350v5
gene id: 3055:CHLRE_09g386350v5
uniprot id: A8J1C2
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TFS-II family.
messages: Necessary for efficient RNA polymerase II transcription elongation past template-encoded arresting sites.
messages: Nucleus

3055:CHLRE 06g252200v5
gene id: 3055:CHLRE_06g252200v5
uniprot id: A8HYJ1
names: Cofactor
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. TOC34 subfamily.
messages: Binds 1 Mg(2+) ion by subunit.
messages: GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (By similarity). Functions as an essential component of the outer chloroplast membrane translocon (TOC) complex, which, in turn, catalyzes the import of nucleus-encoded precursor polypeptides from the cytoplasm to the chloroplast (PubMed:23167510).
messages: Homodimer, heterodimer with other TOC proteins, and monomer. Part of the TOC core complex that includes 1 protein for the specific recognition of transit peptides surrounded by a ring composed of four proteins forming translocation channels, and four to five GTP-binding proteins providing energy. This core complex can interact with components of the TIC complex to form a larger import complex (By similarity). Interacts with ARSA1 (PubMed:28382961).
messages: chloroplast outer membrane

3055:CHLRE 09g387000v5
gene id: 3055:CHLRE_09g387000v5
uniprot id: A8IZH9
names: Similarity
messages: Belongs to the RETICULATA family.

3055:CHLRE 10g452750v5
gene id: 3055:CHLRE_10g452750v5
uniprot id: A8I041
names: Subcellular Location Annotation
messages: Membrane

3055:CHLRE 09g410850v5
gene id: 3055:CHLRE_09g410850v5
uniprot id: A0A2K3DFM1
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.
messages: Cell membrane
messages: Membrane

3055:CHLRE 16g659350v5
gene id: 3055:CHLRE_16g659350v5
uniprot id: A8J8L3
names: Similarity
messages: Belongs to the cytochrome b5 family.

3055:CHLRE 10g436050v5
gene id: 3055:CHLRE_10g436050v5
uniprot id: A8IGH1
names: Function
names: Similarity
messages: Belongs to the iron/manganese superoxide dismutase family.
messages: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

3055:CHLRE 10g434750v5
gene id: 3055:CHLRE_10g434750v5
uniprot id: A8IAT4
names: Caution
names: Similarity
messages: Belongs to the ketol-acid reductoisomerase family.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.

3055:CHLRE 16g674350v5
gene id: 3055:CHLRE_16g674350v5
uniprot id: A8J3J1
names: Similarity
messages: Belongs to the universal ribosomal protein uS13 family.

3055:CHLRE 16g657000v5
gene id: 3055:CHLRE_16g657000v5
uniprot id: A8J8H6
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the TAF10 family.
messages: Nucleus

3055:CHLRE 16g684650v5
gene id: 3055:CHLRE_16g684650v5
uniprot id: A8IS88
names: Similarity
messages: Belongs to the SIMIBI class G3E GTPase family. ZNG1 subfamily.

3055:CHLRE 03g180750v5
gene id: 3055:CHLRE_03g180750v5
uniprot id: A8JH37
names: Function
names: Similarity
messages: Belongs to the vitamin-B12 independent methionine synthase family.
messages: Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation.

3055:CHLRE 03g180250v5
gene id: 3055:CHLRE_03g180250v5
uniprot id: A8IDE6
names: Similarity
messages: Belongs to the myo-inositol 1-phosphate synthase family.

3055:CHLRE 07g318450v5
gene id: 3055:CHLRE_07g318450v5
uniprot id: A8I6P9
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the SEC61-beta family.
messages: Endoplasmic reticulum membrane
messages: Heterotrimeric complex composed of SEC61-alpha, SEC61-beta and SEC61-gamma (Probable). Interacts with ARSA2 (PubMed:28382961).
messages: Necessary for protein translocation in the endoplasmic reticulum.