28894:CP967 RS13935
gene id: 28894:CP967_RS13935
uniprot id: A0A5J6F9N1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 3 family.
messages: Cell membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

28894:CP967 RS13290
gene id: 28894:CP967_RS13290
uniprot id: A0A5J6F944
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL23 family.
messages: One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.
messages: Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.

28894:CP967 RS13265
gene id: 28894:CP967_RS13265
uniprot id: A0A5J6FA26
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL16 family.
messages: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
messages: Part of the 50S ribosomal subunit.

28894:CP967 RS16815
gene id: 28894:CP967_RS16815
uniprot id: A0A5J6FD77
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bS18 family.
messages: Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.

28894:CP967 RS09025
gene id: 28894:CP967_RS09025
uniprot id: A0A5J6F7U0
names: Similarity
messages: Belongs to the GPN-loop GTPase family.

28894:CP967 RS13170
gene id: 28894:CP967_RS13170
uniprot id: A0A5J6FBD7
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS13 family.
messages: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.
messages: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.

28894:CP967 RS14005
gene id: 28894:CP967_RS14005
uniprot id: A0A5J6FAC2
names: Subcellular Location Annotation
messages: Cytoplasm

28894:CP967 RS13570
gene id: 28894:CP967_RS13570
uniprot id: A0A5J6F992
names: Function
names: PTM
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL11 family.
messages: Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
messages: One or more lysine residues are methylated.
messages: Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.

28894:CP967 RS07450
gene id: 28894:CP967_RS07450
uniprot id: A0A5J6F6Q0
names: Subcellular Location Annotation
messages: Cytoplasm

28894:CP967 RS13645
gene id: 28894:CP967_RS13645
uniprot id: A0A5J6F8U6
names: Similarity
messages: Belongs to the UPF0234 family.

28894:CP967 RS13305
gene id: 28894:CP967_RS13305
uniprot id: A0A5J6F9D4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS10 family.
messages: Involved in the binding of tRNA to the ribosomes.
messages: Part of the 30S ribosomal subunit.

28894:CP967 RS13020
gene id: 28894:CP967_RS13020
uniprot id: A0A5J6FAL8
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the GroES chaperonin family.
messages: Cytoplasm
messages: Heptamer of 7 subunits arranged in a ring. Interacts with the chaperonin GroEL.
messages: Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.

28894:CP967 RS07925
gene id: 28894:CP967_RS07925
uniprot id: A0A5J6F6H1
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS15 family.
messages: Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
messages: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
messages: Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.

28894:CP967 RS28665
gene id: 28894:CP967_RS28665
uniprot id: A0A5J6FJD5
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SsgA family.
messages: Cell septum

28894:CP967 RS28995
gene id: 28894:CP967_RS28995
uniprot id: A0A5J6FJK0
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase subunit omega family.
messages: Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
messages: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

28894:CP967 RS26310
gene id: 28894:CP967_RS26310
uniprot id: A0A5J6FJC1
names: Caution
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SecG family.
messages: Cell membrane
messages: Involved in protein export. Participates in an early event of protein translocation.
messages: Lacks conserved residue(s) required for the propagation of feature annotation.
messages: Membrane

28894:CP967 RS13215
gene id: 28894:CP967_RS13215
uniprot id: A0A5J6FA13
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL18 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
messages: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.

28894:CP967 RS28330
gene id: 28894:CP967_RS28330
uniprot id: A0A5J6FFQ7
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL20 family.
messages: Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.

28894:CP967 RS08745
gene id: 28894:CP967_RS08745
uniprot id: A0A5J6F8B5
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: A probable RNA-binding protein.
messages: Belongs to the KhpA RNA-binding protein family.
messages: Cytoplasm

28894:CP967 RS13260
gene id: 28894:CP967_RS13260
uniprot id: A0A5J6F9A5
names: Similarity
messages: Belongs to the universal ribosomal protein uL29 family.

28894:CP967 RS13180
gene id: 28894:CP967_RS13180
uniprot id: A0A5J6F9X3
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the IF-1 family.
messages: Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.
messages: Cytoplasm
messages: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.

28894:CP967 RS12985
gene id: 28894:CP967_RS12985
uniprot id: A0A5J6F975
names: Similarity
messages: Belongs to the sigma-70 factor family. ECF subfamily.

28894:CP967 RS13235
gene id: 28894:CP967_RS13235
uniprot id: A0A5J6FAQ8
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
messages: Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.

28894:CP967 RS18640
gene id: 28894:CP967_RS18640
uniprot id: A0A5J6FBV8
names: Similarity
messages: Belongs to the anti-sigma-factor antagonist family.

28894:CP967 RS13240
gene id: 28894:CP967_RS13240
uniprot id: A0A5J6F935
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL5 family.
messages: Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.
messages: This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.

28894:CP967 RS13175
gene id: 28894:CP967_RS13175
uniprot id: A0A5J6FCW3
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL36 family.

28894:CP967 RS25925
gene id: 28894:CP967_RS25925
uniprot id: A0A5J6FFF1
names: Subcellular Location Annotation
messages: Cytoplasm

28894:CP967 RS09995
gene id: 28894:CP967_RS09995
uniprot id: A0A5J6F7F1
names: Function
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the ATPase C chain family.
messages: Cell membrane
messages: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
messages: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.
messages: Membrane

28894:CP967 RS21445
gene id: 28894:CP967_RS21445
uniprot id: A0A5J6FJU7
names: Similarity
messages: Belongs to the bacterial histone-like protein family.

28894:CP967 RS28325
gene id: 28894:CP967_RS28325
uniprot id: A0A5J6FG64
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL35 family.

28894:CP967 RS13160
gene id: 28894:CP967_RS13160
uniprot id: A0A5J6F982
names: Domain
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase alpha chain family.
messages: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
messages: Homodimer. The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.
messages: The N-terminal domain is essential for RNAP assembly and basal transcription, whereas the C-terminal domain is involved in interaction with transcriptional regulators and with upstream promoter elements.

28894:CP967 RS13885
gene id: 28894:CP967_RS13885
uniprot id: A0A5J6F9M1
names: Function
names: Similarity
names: Subcellular Location Annotation
names: Subunit
messages: Belongs to the complex I subunit 4L family.
messages: Cell membrane
messages: Membrane
messages: NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.
messages: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.

28894:CP967 RS16730
gene id: 28894:CP967_RS16730
uniprot id: A0A5J6FBC9
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the SsgA family.
messages: Cell septum

28894:CP967 RS14800
gene id: 28894:CP967_RS14800
uniprot id: A0A5J6FDW7
names: Subcellular Location Annotation
messages: Cytoplasm

28894:CP967 RS10040
gene id: 28894:CP967_RS10040
uniprot id: A0A5J6FBD4
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
messages: Binds 1 zinc ion per subunit.
messages: Binds the 23S rRNA.
messages: Part of the 50S ribosomal subunit.

28894:CP967 RS16825
gene id: 28894:CP967_RS16825
uniprot id: A0A5J6FBL9
names: Function
names: Similarity
messages: Belongs to the bacterial ribosomal protein bS6 family.
messages: Binds together with S18 to 16S ribosomal RNA.

28894:CP967 RS13415
gene id: 28894:CP967_RS13415
uniprot id: A0A5J6F9D5
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uS12 family.
messages: Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
messages: Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.
messages: With S4 and S5 plays an important role in translational accuracy.

28894:CP967 RS13250
gene id: 28894:CP967_RS13250
uniprot id: A0A5J6FDB4
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL14 family.
messages: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.
messages: Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.

28894:CP967 RS29415
gene id: 28894:CP967_RS29415
uniprot id: A0A5J6FHY1
names: Cofactor
names: Function
names: Similarity
names: Subunit
messages: Belongs to the RNA polymerase-binding protein RbpA family.
messages: Bind 1 Zn(2+) per subunit.
messages: Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
messages: Forms a complex with the RNAP catalytic core and with free principal sigma factors.

28894:CP967 RS08840
gene id: 28894:CP967_RS08840
uniprot id: A0A5J6F7S0
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL32 family.

28894:CP967 RS08875
gene id: 28894:CP967_RS08875
uniprot id: A0A5J6F7X8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL28 family.

28894:CP967 RS13280
gene id: 28894:CP967_RS13280
uniprot id: A0A5J6F9Z3
names: Function
names: Similarity
messages: Belongs to the universal ribosomal protein uS19 family.
messages: Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.

28894:CP967 RS23235
gene id: 28894:CP967_RS23235
uniprot id: A0A5J6FEU8
names: Function
names: Similarity
names: Subunit
messages: Belongs to the bacterial ribosomal protein bL21 family.
messages: Part of the 50S ribosomal subunit. Contacts protein L20.
messages: This protein binds to 23S rRNA in the presence of protein L20.

28894:CP967 RS29590
gene id: 28894:CP967_RS29590
uniprot id: A0A5J6FJU8
names: Similarity
names: Subcellular Location Annotation
messages: Belongs to the sbp family.
messages: Cell membrane

28894:CP967 RS11285
gene id: 28894:CP967_RS11285
uniprot id: A0A5J6F853
names: Cofactor
names: Function
messages: Binds 1 [3Fe-4S] cluster.
messages: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

28894:CP967 RS21010
gene id: 28894:CP967_RS21010
uniprot id: A0A5J6FCA8
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional regulator. Probably redox-responsive. The apo- but not holo-form probably binds DNA.
messages: Belongs to the WhiB family.
messages: Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.
messages: Cytoplasm
messages: The Fe-S cluster can be nitrosylated by nitric oxide (NO).
messages: Upon Fe-S cluster removal intramolecular disulfide bonds are formed.

28894:CP967 RS23240
gene id: 28894:CP967_RS23240
uniprot id: A0A5J6FFG8
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL27 family.

28894:CP967 RS16950
gene id: 28894:CP967_RS16950
uniprot id: A0A5J6FEX6
names: Similarity
messages: Belongs to the bacterial ribosomal protein bL34 family.

28894:CP967 RS16970
gene id: 28894:CP967_RS16970
uniprot id: A0A5J6FBT4
names: Similarity
messages: Belongs to the 6-phosphogluconate dehydrogenase family.

28894:CP967 RS10770
gene id: 28894:CP967_RS10770
uniprot id: A0A5J6FBT1
names: Cofactor
names: Function
names: PTM
names: Similarity
names: Subcellular Location Annotation
messages: Acts as a transcriptional regulator. Probably redox-responsive. The apo- but not holo-form probably binds DNA.
messages: Belongs to the WhiB family.
messages: Binds 1 [4Fe-4S] cluster per subunit. Following nitrosylation of the [4Fe-4S] cluster binds 1 [4Fe-8(NO)] cluster per subunit.
messages: Cytoplasm
messages: The Fe-S cluster can be nitrosylated by nitric oxide (NO).
messages: Upon Fe-S cluster removal intramolecular disulfide bonds are formed.

28894:CP967 RS13275
gene id: 28894:CP967_RS13275
uniprot id: A0A5J6FCY2
names: Function
names: Similarity
names: Subunit
messages: Belongs to the universal ribosomal protein uL22 family.
messages: Part of the 50S ribosomal subunit.
messages: The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
messages: This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.